##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM589046v1 #!genome-build-accession NCBI_Assembly:GCA_005890465.1 #!annotation-date 03/21/2019 18:25:57 #!annotation-source NCBI ##sequence-region SOQE01000001.1 1 21676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000001.1 Genbank region 1 21676 . + . ID=SOQE01000001.1:1..21676;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000001.1 Genbank gene 1 453 . + . ID=gene-E3V84_00005;Name=E3V84_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00005;partial=true;start_range=.,1 SOQE01000001.1 Protein Homology CDS 1 453 . + 0 ID=cds-TMR48965.1;Parent=gene-E3V84_00005;Dbxref=NCBI_GP:TMR48965.1;Name=TMR48965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_00005;partial=true;product=IS630 family transposase;protein_id=TMR48965.1;start_range=.,1;transl_table=11 SOQE01000001.1 Genbank gene 446 1543 . + . ID=gene-E3V84_00010;Name=E3V84_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00010 SOQE01000001.1 Protein Homology CDS 446 1543 . + 0 ID=cds-TMR48974.1;Parent=gene-E3V84_00010;Dbxref=NCBI_GP:TMR48974.1;Name=TMR48974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446272.1;locus_tag=E3V84_00010;product=glycerate kinase;protein_id=TMR48974.1;transl_table=11 SOQE01000001.1 Genbank gene 1540 1986 . - . ID=gene-E3V84_00015;Name=E3V84_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00015 SOQE01000001.1 Protein Homology CDS 1540 1986 . - 0 ID=cds-TMR48966.1;Parent=gene-E3V84_00015;Dbxref=NCBI_GP:TMR48966.1;Name=TMR48966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446271.1;locus_tag=E3V84_00015;product=DUF1694 domain-containing protein;protein_id=TMR48966.1;transl_table=11 SOQE01000001.1 Genbank gene 2150 3454 . + . ID=gene-E3V84_00020;Name=E3V84_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00020 SOQE01000001.1 Protein Homology CDS 2150 3454 . + 0 ID=cds-TMR48967.1;Parent=gene-E3V84_00020;Dbxref=NCBI_GP:TMR48967.1;Name=TMR48967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022813.1;locus_tag=E3V84_00020;product=phosphopyruvate hydratase;protein_id=TMR48967.1;transl_table=11 SOQE01000001.1 Genbank gene 4076 5353 . + . ID=gene-E3V84_00025;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=E3V84_00025 SOQE01000001.1 Protein Homology CDS 4076 5353 . + 0 ID=cds-TMR48968.1;Parent=gene-E3V84_00025;Dbxref=NCBI_GP:TMR48968.1;Name=TMR48968.1;gbkey=CDS;gene=ltrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446251.1;locus_tag=E3V84_00025;product=group II intron reverse transcriptase/maturase;protein_id=TMR48968.1;transl_table=11 SOQE01000001.1 Genbank gene 5437 5796 . - . ID=gene-E3V84_00030;Name=E3V84_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00030 SOQE01000001.1 Protein Homology CDS 5437 5796 . - 0 ID=cds-TMR48975.1;Parent=gene-E3V84_00030;Dbxref=NCBI_GP:TMR48975.1;Name=TMR48975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235657.1;locus_tag=E3V84_00030;product=integrase;protein_id=TMR48975.1;transl_table=11 SOQE01000001.1 Genbank pseudogene 5902 6057 . + . ID=gene-E3V84_00035;Name=E3V84_00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00035;pseudo=true SOQE01000001.1 Protein Homology CDS 5902 6057 . + 0 ID=cds-E3V84_00035;Parent=gene-E3V84_00035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358541.1;locus_tag=E3V84_00035;product=diacylglycerol kinase family lipid kinase;pseudo=true;transl_table=11 SOQE01000001.1 Genbank gene 6255 9530 . + . ID=gene-E3V84_00040;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=E3V84_00040 SOQE01000001.1 Protein Homology CDS 6255 9530 . + 0 ID=cds-TMR48969.1;Parent=gene-E3V84_00040;Dbxref=NCBI_GP:TMR48969.1;Name=TMR48969.1;gbkey=CDS;gene=rexB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446179.1;locus_tag=E3V84_00040;product=ATP-dependent nuclease subunit B;protein_id=TMR48969.1;transl_table=11 SOQE01000001.1 Genbank gene 9527 13177 . + . ID=gene-E3V84_00045;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=E3V84_00045 SOQE01000001.1 Protein Homology CDS 9527 13177 . + 0 ID=cds-TMR48970.1;Parent=gene-E3V84_00045;Dbxref=NCBI_GP:TMR48970.1;Name=TMR48970.1;gbkey=CDS;gene=addA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446178.1;locus_tag=E3V84_00045;product=helicase-exonuclease AddAB subunit AddA;protein_id=TMR48970.1;transl_table=11 SOQE01000001.1 Genbank gene 13354 14532 . + . ID=gene-E3V84_00050;Name=E3V84_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00050 SOQE01000001.1 Protein Homology CDS 13354 14532 . + 0 ID=cds-TMR48971.1;Parent=gene-E3V84_00050;Dbxref=NCBI_GP:TMR48971.1;Name=TMR48971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446177.1;locus_tag=E3V84_00050;product=hypothetical protein;protein_id=TMR48971.1;transl_table=11 SOQE01000001.1 Genbank gene 14771 21079 . + . ID=gene-E3V84_00055;Name=E3V84_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00055 SOQE01000001.1 Protein Homology CDS 14771 21079 . + 0 ID=cds-TMR48972.1;Parent=gene-E3V84_00055;Dbxref=NCBI_GP:TMR48972.1;Name=TMR48972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417168.1;locus_tag=E3V84_00055;product=YSIRK-type signal peptide-containing protein;protein_id=TMR48972.1;transl_table=11 SOQE01000001.1 Genbank pseudogene 21122 21211 . + . ID=gene-E3V84_00060;Name=E3V84_00060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00060;pseudo=true SOQE01000001.1 Protein Homology CDS 21122 21211 . + 0 ID=cds-E3V84_00060;Parent=gene-E3V84_00060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834334.1;locus_tag=E3V84_00060;product=peptidase;pseudo=true;transl_table=11 SOQE01000001.1 Genbank gene 21289 21447 . - . ID=gene-E3V84_00065;Name=E3V84_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00065 SOQE01000001.1 Protein Homology CDS 21289 21447 . - 0 ID=cds-TMR48976.1;Parent=gene-E3V84_00065;Dbxref=NCBI_GP:TMR48976.1;Name=TMR48976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_00065;product=transposase domain-containing protein;protein_id=TMR48976.1;transl_table=11 SOQE01000001.1 Genbank gene 21518 21676 . - . ID=gene-E3V84_00070;Name=E3V84_00070;end_range=21676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00070;partial=true SOQE01000001.1 Protein Homology CDS 21518 21676 . - 0 ID=cds-TMR48973.1;Parent=gene-E3V84_00070;Dbxref=NCBI_GP:TMR48973.1;Name=TMR48973.1;end_range=21676,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03050.12;locus_tag=E3V84_00070;partial=true;product=IS66 family transposase;protein_id=TMR48973.1;transl_table=11 ##sequence-region SOQE01000010.1 1 109674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000010.1 Genbank region 1 109674 . + . ID=SOQE01000010.1:1..109674;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000010.1 Genbank gene 1 117 . - . ID=gene-E3V84_00830;Name=E3V84_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00830;partial=true;start_range=.,1 SOQE01000010.1 Protein Homology CDS 1 117 . - 0 ID=cds-TMR48495.1;Parent=gene-E3V84_00830;Dbxref=NCBI_GP:TMR48495.1;Name=TMR48495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_00830;partial=true;product=IS630 family transposase;protein_id=TMR48495.1;start_range=.,1;transl_table=11 SOQE01000010.1 Genbank gene 104 445 . - . ID=gene-E3V84_00835;Name=E3V84_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00835 SOQE01000010.1 Protein Homology CDS 104 445 . - 0 ID=cds-TMR48496.1;Parent=gene-E3V84_00835;Dbxref=NCBI_GP:TMR48496.1;Name=TMR48496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_00835;product=hypothetical protein;protein_id=TMR48496.1;transl_table=11 SOQE01000010.1 Genbank gene 432 716 . - . ID=gene-E3V84_00840;Name=E3V84_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00840 SOQE01000010.1 Protein Homology CDS 432 716 . - 0 ID=cds-TMR48604.1;Parent=gene-E3V84_00840;Dbxref=NCBI_GP:TMR48604.1;Name=TMR48604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808732.1;locus_tag=E3V84_00840;product=transposase;protein_id=TMR48604.1;transl_table=11 SOQE01000010.1 Genbank gene 1052 1630 . + . ID=gene-E3V84_00845;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=E3V84_00845 SOQE01000010.1 Protein Homology CDS 1052 1630 . + 0 ID=cds-TMR48497.1;Parent=gene-E3V84_00845;Dbxref=NCBI_GP:TMR48497.1;Name=TMR48497.1;gbkey=CDS;gene=pduL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405172.1;locus_tag=E3V84_00845;product=phosphate propanoyltransferase;protein_id=TMR48497.1;transl_table=11 SOQE01000010.1 Genbank gene 1650 2441 . + . ID=gene-E3V84_00850;Name=E3V84_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00850 SOQE01000010.1 Protein Homology CDS 1650 2441 . + 0 ID=cds-TMR48498.1;Parent=gene-E3V84_00850;Dbxref=NCBI_GP:TMR48498.1;Name=TMR48498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599441.1;locus_tag=E3V84_00850;product=ABC transporter permease;protein_id=TMR48498.1;transl_table=11 SOQE01000010.1 Genbank gene 2529 2897 . + . ID=gene-E3V84_00855;Name=E3V84_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00855 SOQE01000010.1 Protein Homology CDS 2529 2897 . + 0 ID=cds-TMR48499.1;Parent=gene-E3V84_00855;Dbxref=NCBI_GP:TMR48499.1;Name=TMR48499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284889.1;locus_tag=E3V84_00855;product=ATP-binding cassette domain-containing protein;protein_id=TMR48499.1;transl_table=11 SOQE01000010.1 Genbank gene 3829 4158 . + . ID=gene-E3V84_00860;Name=E3V84_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00860 SOQE01000010.1 Protein Homology CDS 3829 4158 . + 0 ID=cds-TMR48500.1;Parent=gene-E3V84_00860;Dbxref=NCBI_GP:TMR48500.1;Name=TMR48500.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_00860;product=hypothetical protein;protein_id=TMR48500.1;transl_table=11 SOQE01000010.1 Genbank gene 4367 5242 . + . ID=gene-E3V84_00865;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=E3V84_00865 SOQE01000010.1 Protein Homology CDS 4367 5242 . + 0 ID=cds-TMR48501.1;Parent=gene-E3V84_00865;Dbxref=NCBI_GP:TMR48501.1;Name=TMR48501.1;gbkey=CDS;gene=pdxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446491.1;locus_tag=E3V84_00865;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=TMR48501.1;transl_table=11 SOQE01000010.1 Genbank gene 5243 5824 . + . ID=gene-E3V84_00870;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=E3V84_00870 SOQE01000010.1 Protein Homology CDS 5243 5824 . + 0 ID=cds-TMR48502.1;Parent=gene-E3V84_00870;Dbxref=NCBI_GP:TMR48502.1;Name=TMR48502.1;gbkey=CDS;gene=pdxT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689942.1;locus_tag=E3V84_00870;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=TMR48502.1;transl_table=11 SOQE01000010.1 Genbank gene 6064 6711 . - . ID=gene-E3V84_00875;Name=E3V84_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00875 SOQE01000010.1 Protein Homology CDS 6064 6711 . - 0 ID=cds-TMR48503.1;Parent=gene-E3V84_00875;Dbxref=NCBI_GP:TMR48503.1;Name=TMR48503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446489.1;locus_tag=E3V84_00875;product=hemolysin III family protein;protein_id=TMR48503.1;transl_table=11 SOQE01000010.1 Genbank gene 6708 7154 . - . ID=gene-E3V84_00880;Name=E3V84_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00880 SOQE01000010.1 Protein Homology CDS 6708 7154 . - 0 ID=cds-TMR48504.1;Parent=gene-E3V84_00880;Dbxref=NCBI_GP:TMR48504.1;Name=TMR48504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446488.1;locus_tag=E3V84_00880;product=DUF1836 domain-containing protein;protein_id=TMR48504.1;transl_table=11 SOQE01000010.1 Genbank gene 7289 7783 . + . ID=gene-E3V84_00885;Name=E3V84_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00885 SOQE01000010.1 Protein Homology CDS 7289 7783 . + 0 ID=cds-TMR48505.1;Parent=gene-E3V84_00885;Dbxref=NCBI_GP:TMR48505.1;Name=TMR48505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446487.1;locus_tag=E3V84_00885;product=N-acetyltransferase;protein_id=TMR48505.1;transl_table=11 SOQE01000010.1 Genbank gene 7783 8301 . + . ID=gene-E3V84_00890;Name=E3V84_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00890 SOQE01000010.1 Protein Homology CDS 7783 8301 . + 0 ID=cds-TMR48506.1;Parent=gene-E3V84_00890;Dbxref=NCBI_GP:TMR48506.1;Name=TMR48506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358910.1;locus_tag=E3V84_00890;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=TMR48506.1;transl_table=11 SOQE01000010.1 Genbank gene 8307 8663 . + . ID=gene-E3V84_00895;Name=E3V84_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00895 SOQE01000010.1 Protein Homology CDS 8307 8663 . + 0 ID=cds-TMR48507.1;Parent=gene-E3V84_00895;Dbxref=NCBI_GP:TMR48507.1;Name=TMR48507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358909.1;locus_tag=E3V84_00895;product=arsenate reductase family protein;protein_id=TMR48507.1;transl_table=11 SOQE01000010.1 Genbank gene 8821 9621 . + . ID=gene-E3V84_00900;Name=E3V84_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00900 SOQE01000010.1 Protein Homology CDS 8821 9621 . + 0 ID=cds-TMR48508.1;Parent=gene-E3V84_00900;Dbxref=NCBI_GP:TMR48508.1;Name=TMR48508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358908.1;locus_tag=E3V84_00900;product=amino acid ABC transporter permease;protein_id=TMR48508.1;transl_table=11 SOQE01000010.1 Genbank gene 9621 10364 . + . ID=gene-E3V84_00905;Name=E3V84_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00905 SOQE01000010.1 Protein Homology CDS 9621 10364 . + 0 ID=cds-TMR48509.1;Parent=gene-E3V84_00905;Dbxref=NCBI_GP:TMR48509.1;Name=TMR48509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446483.1;locus_tag=E3V84_00905;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR48509.1;transl_table=11 SOQE01000010.1 Genbank gene 10430 10666 . + . ID=gene-E3V84_00910;Name=E3V84_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00910 SOQE01000010.1 Protein Homology CDS 10430 10666 . + 0 ID=cds-TMR48510.1;Parent=gene-E3V84_00910;Dbxref=NCBI_GP:TMR48510.1;Name=TMR48510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358906.1;locus_tag=E3V84_00910;product=DUF4059 family protein;protein_id=TMR48510.1;transl_table=11 SOQE01000010.1 Genbank gene 10732 11643 . + . ID=gene-E3V84_00915;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=E3V84_00915 SOQE01000010.1 Protein Homology CDS 10732 11643 . + 0 ID=cds-TMR48511.1;Parent=gene-E3V84_00915;Dbxref=NCBI_GP:TMR48511.1;Name=TMR48511.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358905.1;locus_tag=E3V84_00915;product=thioredoxin-disulfide reductase;protein_id=TMR48511.1;transl_table=11 SOQE01000010.1 Genbank gene 11682 12410 . - . ID=gene-E3V84_00920;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=E3V84_00920 SOQE01000010.1 Protein Homology CDS 11682 12410 . - 0 ID=cds-TMR48512.1;Parent=gene-E3V84_00920;Dbxref=NCBI_GP:TMR48512.1;Name=TMR48512.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446480.1;locus_tag=E3V84_00920;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=TMR48512.1;transl_table=11 SOQE01000010.1 Genbank gene 12455 13066 . - . ID=gene-E3V84_00925;Name=E3V84_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00925 SOQE01000010.1 Protein Homology CDS 12455 13066 . - 0 ID=cds-TMR48513.1;Parent=gene-E3V84_00925;Dbxref=NCBI_GP:TMR48513.1;Name=TMR48513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446479.1;locus_tag=E3V84_00925;product=peptide deformylase;protein_id=TMR48513.1;transl_table=11 SOQE01000010.1 Genbank gene 13392 14711 . + . ID=gene-E3V84_00930;Name=E3V84_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00930 SOQE01000010.1 Protein Homology CDS 13392 14711 . + 0 ID=cds-TMR48514.1;Parent=gene-E3V84_00930;Dbxref=NCBI_GP:TMR48514.1;Name=TMR48514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446478.1;locus_tag=E3V84_00930;product=CapA family protein;protein_id=TMR48514.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 14756 15453 . + . ID=gene-E3V84_00935;Name=E3V84_00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00935;pseudo=true SOQE01000010.1 Protein Homology CDS 14756 15453 . + 0 ID=cds-E3V84_00935;Parent=gene-E3V84_00935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00935;product=IS5 family transposase;pseudo=true;transl_table=11 SOQE01000010.1 Genbank pseudogene 15556 15663 . + . ID=gene-E3V84_00940;Name=E3V84_00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00940;pseudo=true SOQE01000010.1 Protein Homology CDS 15556 15663 . + 0 ID=cds-E3V84_00940;Parent=gene-E3V84_00940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00940;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 15700 15849 . + . ID=gene-E3V84_00945;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V84_00945 SOQE01000010.1 Protein Homology CDS 15700 15849 . + 0 ID=cds-TMR48515.1;Parent=gene-E3V84_00945;Dbxref=NCBI_GP:TMR48515.1;Name=TMR48515.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028330.1;locus_tag=E3V84_00945;product=50S ribosomal protein L33;protein_id=TMR48515.1;transl_table=11 SOQE01000010.1 Genbank gene 15889 16122 . + . ID=gene-E3V84_00950;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=E3V84_00950 SOQE01000010.1 Protein Homology CDS 15889 16122 . + 0 ID=cds-TMR48516.1;Parent=gene-E3V84_00950;Dbxref=NCBI_GP:TMR48516.1;Name=TMR48516.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358471.1;locus_tag=E3V84_00950;product=preprotein translocase subunit SecG;protein_id=TMR48516.1;transl_table=11 SOQE01000010.1 Genbank gene 16384 18738 . + . ID=gene-E3V84_00955;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=E3V84_00955 SOQE01000010.1 Protein Homology CDS 16384 18738 . + 0 ID=cds-TMR48517.1;Parent=gene-E3V84_00955;Dbxref=NCBI_GP:TMR48517.1;Name=TMR48517.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358472.1;locus_tag=E3V84_00955;product=ribonuclease R;protein_id=TMR48517.1;transl_table=11 SOQE01000010.1 Genbank gene 18701 19168 . + . ID=gene-E3V84_00960;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=E3V84_00960 SOQE01000010.1 Protein Homology CDS 18701 19168 . + 0 ID=cds-TMR48518.1;Parent=gene-E3V84_00960;Dbxref=NCBI_GP:TMR48518.1;Name=TMR48518.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358473.1;locus_tag=E3V84_00960;product=SsrA-binding protein SmpB;protein_id=TMR48518.1;transl_table=11 SOQE01000010.1 Genbank gene 19184 20005 . + . ID=gene-E3V84_00965;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=E3V84_00965 SOQE01000010.1 Protein Homology CDS 19184 20005 . + 0 ID=cds-TMR48519.1;Parent=gene-E3V84_00965;Dbxref=NCBI_GP:TMR48519.1;Name=TMR48519.1;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446090.1;locus_tag=E3V84_00965;product=SAM-dependent methyltransferase TehB;protein_id=TMR48519.1;transl_table=11 SOQE01000010.1 Genbank gene 20117 21070 . + . ID=gene-E3V84_00970;Name=E3V84_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00970 SOQE01000010.1 Protein Homology CDS 20117 21070 . + 0 ID=cds-TMR48520.1;Parent=gene-E3V84_00970;Dbxref=NCBI_GP:TMR48520.1;Name=TMR48520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358475.1;locus_tag=E3V84_00970;product=competence protein CoiA;protein_id=TMR48520.1;transl_table=11 SOQE01000010.1 Genbank gene 21089 22891 . + . ID=gene-E3V84_00975;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=E3V84_00975 SOQE01000010.1 Protein Homology CDS 21089 22891 . + 0 ID=cds-TMR48521.1;Parent=gene-E3V84_00975;Dbxref=NCBI_GP:TMR48521.1;Name=TMR48521.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358476.1;locus_tag=E3V84_00975;product=oligoendopeptidase F;protein_id=TMR48521.1;transl_table=11 SOQE01000010.1 Genbank gene 22893 23606 . + . ID=gene-E3V84_00980;Name=E3V84_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00980 SOQE01000010.1 Protein Homology CDS 22893 23606 . + 0 ID=cds-TMR48522.1;Parent=gene-E3V84_00980;Dbxref=NCBI_GP:TMR48522.1;Name=TMR48522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446094.1;locus_tag=E3V84_00980;product=O-methyltransferase;protein_id=TMR48522.1;transl_table=11 SOQE01000010.1 Genbank gene 23673 24614 . + . ID=gene-E3V84_00985;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=E3V84_00985 SOQE01000010.1 Protein Homology CDS 23673 24614 . + 0 ID=cds-TMR48523.1;Parent=gene-E3V84_00985;Dbxref=NCBI_GP:TMR48523.1;Name=TMR48523.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358478.1;locus_tag=E3V84_00985;product=peptidylprolyl isomerase PrsA;protein_id=TMR48523.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 24921 25016 . + . ID=gene-E3V84_00990;Name=E3V84_00990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00990;pseudo=true SOQE01000010.1 Protein Homology CDS 24921 25016 . + 0 ID=cds-E3V84_00990;Parent=gene-E3V84_00990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V84_00990;product=transposase;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 25360 25980 . - . ID=gene-E3V84_00995;Name=E3V84_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00995 SOQE01000010.1 Protein Homology CDS 25360 25980 . - 0 ID=cds-TMR48524.1;Parent=gene-E3V84_00995;Dbxref=NCBI_GP:TMR48524.1;Name=TMR48524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358481.1;locus_tag=E3V84_00995;product=histidine phosphatase family protein;protein_id=TMR48524.1;transl_table=11 SOQE01000010.1 Genbank gene 25980 26462 . - . ID=gene-E3V84_01000;Name=E3V84_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01000 SOQE01000010.1 Protein Homology CDS 25980 26462 . - 0 ID=cds-TMR48525.1;Parent=gene-E3V84_01000;Dbxref=NCBI_GP:TMR48525.1;Name=TMR48525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358482.1;locus_tag=E3V84_01000;product=aminoacyl-tRNA deacylase;protein_id=TMR48525.1;transl_table=11 SOQE01000010.1 Genbank gene 26462 27304 . - . ID=gene-E3V84_01005;Name=E3V84_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01005 SOQE01000010.1 Protein Homology CDS 26462 27304 . - 0 ID=cds-TMR48526.1;Parent=gene-E3V84_01005;Dbxref=NCBI_GP:TMR48526.1;Name=TMR48526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358483.1;locus_tag=E3V84_01005;product=DUF368 domain-containing protein;protein_id=TMR48526.1;transl_table=11 SOQE01000010.1 Genbank gene 27399 28199 . - . ID=gene-E3V84_01010;Name=E3V84_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01010 SOQE01000010.1 Protein Homology CDS 27399 28199 . - 0 ID=cds-TMR48527.1;Parent=gene-E3V84_01010;Dbxref=NCBI_GP:TMR48527.1;Name=TMR48527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446400.1;locus_tag=E3V84_01010;product=glycosyl hydrolase 25 family protein;protein_id=TMR48527.1;transl_table=11 SOQE01000010.1 Genbank gene 28344 29723 . + . ID=gene-E3V84_01015;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=E3V84_01015 SOQE01000010.1 Protein Homology CDS 28344 29723 . + 0 ID=cds-TMR48528.1;Parent=gene-E3V84_01015;Dbxref=NCBI_GP:TMR48528.1;Name=TMR48528.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446399.1;locus_tag=E3V84_01015;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=TMR48528.1;transl_table=11 SOQE01000010.1 Genbank gene 29733 30278 . + . ID=gene-E3V84_01020;Name=E3V84_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01020 SOQE01000010.1 Protein Homology CDS 29733 30278 . + 0 ID=cds-TMR48529.1;Parent=gene-E3V84_01020;Dbxref=NCBI_GP:TMR48529.1;Name=TMR48529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358486.1;locus_tag=E3V84_01020;product=NUDIX hydrolase;protein_id=TMR48529.1;transl_table=11 SOQE01000010.1 Genbank gene 30290 30604 . + . ID=gene-E3V84_01025;Name=E3V84_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01025 SOQE01000010.1 Protein Homology CDS 30290 30604 . + 0 ID=cds-TMR48530.1;Parent=gene-E3V84_01025;Dbxref=NCBI_GP:TMR48530.1;Name=TMR48530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446397.1;locus_tag=E3V84_01025;product=foldase;protein_id=TMR48530.1;transl_table=11 SOQE01000010.1 Genbank gene 30621 31313 . + . ID=gene-E3V84_01030;Name=E3V84_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01030 SOQE01000010.1 Protein Homology CDS 30621 31313 . + 0 ID=cds-TMR48531.1;Parent=gene-E3V84_01030;Dbxref=NCBI_GP:TMR48531.1;Name=TMR48531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446396.1;locus_tag=E3V84_01030;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=TMR48531.1;transl_table=11 SOQE01000010.1 Genbank gene 31390 31881 . + . ID=gene-E3V84_01035;Name=E3V84_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01035 SOQE01000010.1 Protein Homology CDS 31390 31881 . + 0 ID=cds-TMR48532.1;Parent=gene-E3V84_01035;Dbxref=NCBI_GP:TMR48532.1;Name=TMR48532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358489.1;locus_tag=E3V84_01035;product=DUF536 domain-containing protein;protein_id=TMR48532.1;transl_table=11 SOQE01000010.1 Genbank gene 31979 32569 . + . ID=gene-E3V84_01040;Name=E3V84_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01040 SOQE01000010.1 Protein Homology CDS 31979 32569 . + 0 ID=cds-TMR48533.1;Parent=gene-E3V84_01040;Dbxref=NCBI_GP:TMR48533.1;Name=TMR48533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446394.1;locus_tag=E3V84_01040;product=3'-5' exonuclease;protein_id=TMR48533.1;transl_table=11 SOQE01000010.1 Genbank gene 32572 34341 . + . ID=gene-E3V84_01045;Name=E3V84_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01045 SOQE01000010.1 Protein Homology CDS 32572 34341 . + 0 ID=cds-TMR48534.1;Parent=gene-E3V84_01045;Dbxref=NCBI_GP:TMR48534.1;Name=TMR48534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358491.1;locus_tag=E3V84_01045;product=glycerophosphodiester phosphodiesterase;protein_id=TMR48534.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 34771 35060 . + . ID=gene-E3V84_01050;Name=E3V84_01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01050;pseudo=true SOQE01000010.1 Protein Homology CDS 34771 35060 . + 0 ID=cds-E3V84_01050;Parent=gene-E3V84_01050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284790.1;locus_tag=E3V84_01050;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQE01000010.1 Genbank pseudogene 36781 36978 . + . ID=gene-E3V84_01055;Name=E3V84_01055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01055;pseudo=true SOQE01000010.1 Protein Homology CDS 36781 36978 . + 0 ID=cds-E3V84_01055;Parent=gene-E3V84_01055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358494.1;locus_tag=E3V84_01055;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 37018 37422 . + . ID=gene-E3V84_01060;Name=E3V84_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01060 SOQE01000010.1 Protein Homology CDS 37018 37422 . + 0 ID=cds-TMR48605.1;Parent=gene-E3V84_01060;Dbxref=NCBI_GP:TMR48605.1;Name=TMR48605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358496.1;locus_tag=E3V84_01060;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR48605.1;transl_table=11 SOQE01000010.1 Genbank gene 37652 38359 . + . ID=gene-E3V84_01065;Name=E3V84_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01065 SOQE01000010.1 Protein Homology CDS 37652 38359 . + 0 ID=cds-TMR48535.1;Parent=gene-E3V84_01065;Dbxref=NCBI_GP:TMR48535.1;Name=TMR48535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358497.1;locus_tag=E3V84_01065;product=cytochrome c biogenesis protein CcdA;protein_id=TMR48535.1;transl_table=11 SOQE01000010.1 Genbank gene 38371 38928 . + . ID=gene-E3V84_01070;Name=E3V84_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01070 SOQE01000010.1 Protein Homology CDS 38371 38928 . + 0 ID=cds-TMR48536.1;Parent=gene-E3V84_01070;Dbxref=NCBI_GP:TMR48536.1;Name=TMR48536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446256.1;locus_tag=E3V84_01070;product=TlpA family protein disulfide reductase;protein_id=TMR48536.1;transl_table=11 SOQE01000010.1 Genbank gene 39051 40442 . + . ID=gene-E3V84_01075;Name=E3V84_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01075 SOQE01000010.1 Protein Homology CDS 39051 40442 . + 0 ID=cds-TMR48537.1;Parent=gene-E3V84_01075;Dbxref=NCBI_GP:TMR48537.1;Name=TMR48537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446255.1;locus_tag=E3V84_01075;product=amino acid permease;protein_id=TMR48537.1;transl_table=11 SOQE01000010.1 Genbank gene 40585 41502 . + . ID=gene-E3V84_01080;Name=adcAII;gbkey=Gene;gene=adcAII;gene_biotype=protein_coding;locus_tag=E3V84_01080 SOQE01000010.1 Protein Homology CDS 40585 41502 . + 0 ID=cds-TMR48538.1;Parent=gene-E3V84_01080;Dbxref=NCBI_GP:TMR48538.1;Name=TMR48538.1;gbkey=CDS;gene=adcAII;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446254.1;locus_tag=E3V84_01080;product=zinc-binding lipoprotein AdcAII;protein_id=TMR48538.1;transl_table=11 SOQE01000010.1 Genbank gene 41510 44599 . + . ID=gene-E3V84_01085;Name=E3V84_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01085 SOQE01000010.1 Protein Homology CDS 41510 44599 . + 0 ID=cds-TMR48539.1;Parent=gene-E3V84_01085;Dbxref=NCBI_GP:TMR48539.1;Name=TMR48539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700358.1;locus_tag=E3V84_01085;product=pneumococcal-type histidine triad protein;protein_id=TMR48539.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 44919 46547 . + . ID=gene-E3V84_01090;Name=E3V84_01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01090;pseudo=true SOQE01000010.1 Protein Homology CDS 44919 46547 . + 0 ID=cds-E3V84_01090;Parent=gene-E3V84_01090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672567.1;locus_tag=E3V84_01090;product=pneumococcal-type histidine triad protein;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 46624 46845 . - . ID=gene-E3V84_01095;Name=E3V84_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01095 SOQE01000010.1 Protein Homology CDS 46624 46845 . - 0 ID=cds-TMR48540.1;Parent=gene-E3V84_01095;Dbxref=NCBI_GP:TMR48540.1;Name=TMR48540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844654.1;locus_tag=E3V84_01095;product=hypothetical protein;protein_id=TMR48540.1;transl_table=11 SOQE01000010.1 Genbank gene 46810 47421 . + . ID=gene-E3V84_01100;Name=E3V84_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01100 SOQE01000010.1 Protein Homology CDS 46810 47421 . + 0 ID=cds-TMR48541.1;Parent=gene-E3V84_01100;Dbxref=NCBI_GP:TMR48541.1;Name=TMR48541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358506.1;locus_tag=E3V84_01100;product=hypothetical protein;protein_id=TMR48541.1;transl_table=11 SOQE01000010.1 Genbank gene 47475 48698 . - . ID=gene-E3V84_01105;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=E3V84_01105 SOQE01000010.1 Protein Homology CDS 47475 48698 . - 0 ID=cds-TMR48542.1;Parent=gene-E3V84_01105;Dbxref=NCBI_GP:TMR48542.1;Name=TMR48542.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446250.1;locus_tag=E3V84_01105;product=peptidase T;protein_id=TMR48542.1;transl_table=11 SOQE01000010.1 Genbank gene 48852 49946 . + . ID=gene-E3V84_01110;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=E3V84_01110 SOQE01000010.1 Protein Homology CDS 48852 49946 . + 0 ID=cds-TMR48543.1;Parent=gene-E3V84_01110;Dbxref=NCBI_GP:TMR48543.1;Name=TMR48543.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358508.1;locus_tag=E3V84_01110;product=ferrochelatase;protein_id=TMR48543.1;transl_table=11 SOQE01000010.1 Genbank gene 49992 50369 . - . ID=gene-E3V84_01115;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=E3V84_01115 SOQE01000010.1 Protein Homology CDS 49992 50369 . - 0 ID=cds-TMR48544.1;Parent=gene-E3V84_01115;Dbxref=NCBI_GP:TMR48544.1;Name=TMR48544.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358509.1;locus_tag=E3V84_01115;product=large conductance mechanosensitive channel protein MscL;protein_id=TMR48544.1;transl_table=11 SOQE01000010.1 Genbank gene 50451 50882 . - . ID=gene-E3V84_01120;Name=E3V84_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01120 SOQE01000010.1 Protein Homology CDS 50451 50882 . - 0 ID=cds-TMR48545.1;Parent=gene-E3V84_01120;Dbxref=NCBI_GP:TMR48545.1;Name=TMR48545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358510.1;locus_tag=E3V84_01120;product=GtrA family protein;protein_id=TMR48545.1;transl_table=11 SOQE01000010.1 cmsearch riboswitch 50911 51007 . + . ID=id-SOQE01000010.1:50911..51007;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000010.1 Genbank gene 51005 51514 . + . ID=gene-E3V84_01125;Name=E3V84_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01125 SOQE01000010.1 Protein Homology CDS 51005 51514 . + 0 ID=cds-TMR48546.1;Parent=gene-E3V84_01125;Dbxref=NCBI_GP:TMR48546.1;Name=TMR48546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446246.1;locus_tag=E3V84_01125;product=queuosine transporter QueT;protein_id=TMR48546.1;transl_table=11 SOQE01000010.1 Genbank gene 51614 51686 . + . ID=gene-E3V84_01130;Name=E3V84_01130;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_01130 SOQE01000010.1 tRNAscan-SE tRNA 51614 51686 . + . ID=rna-E3V84_01130;Parent=gene-E3V84_01130;anticodon=(pos:51647..51649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_01130;product=tRNA-Thr SOQE01000010.1 tRNAscan-SE exon 51614 51686 . + . ID=exon-E3V84_01130-1;Parent=rna-E3V84_01130;anticodon=(pos:51647..51649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_01130;product=tRNA-Thr SOQE01000010.1 Genbank gene 52029 53105 . + . ID=gene-E3V84_01135;Name=E3V84_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01135 SOQE01000010.1 Protein Homology CDS 52029 53105 . + 0 ID=cds-TMR48547.1;Parent=gene-E3V84_01135;Dbxref=NCBI_GP:TMR48547.1;Name=TMR48547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=E3V84_01135;product=aspartate-semialdehyde dehydrogenase;protein_id=TMR48547.1;transl_table=11 SOQE01000010.1 Genbank gene 53161 54096 . + . ID=gene-E3V84_01140;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=E3V84_01140 SOQE01000010.1 Protein Homology CDS 53161 54096 . + 0 ID=cds-TMR48548.1;Parent=gene-E3V84_01140;Dbxref=NCBI_GP:TMR48548.1;Name=TMR48548.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446244.1;locus_tag=E3V84_01140;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TMR48548.1;transl_table=11 SOQE01000010.1 Genbank gene 54142 55515 . - . ID=gene-E3V84_01145;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=E3V84_01145 SOQE01000010.1 Protein Homology CDS 54142 55515 . - 0 ID=cds-TMR48549.1;Parent=gene-E3V84_01145;Dbxref=NCBI_GP:TMR48549.1;Name=TMR48549.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446243.1;locus_tag=E3V84_01145;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TMR48549.1;transl_table=11 SOQE01000010.1 Genbank gene 55653 55835 . - . ID=gene-E3V84_01150;Name=E3V84_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01150 SOQE01000010.1 Protein Homology CDS 55653 55835 . - 0 ID=cds-TMR48550.1;Parent=gene-E3V84_01150;Dbxref=NCBI_GP:TMR48550.1;Name=TMR48550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358515.1;locus_tag=E3V84_01150;product=4-oxalocrotonate tautomerase;protein_id=TMR48550.1;transl_table=11 SOQE01000010.1 Genbank gene 55958 56557 . + . ID=gene-E3V84_01155;Name=E3V84_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01155 SOQE01000010.1 Protein Homology CDS 55958 56557 . + 0 ID=cds-TMR48551.1;Parent=gene-E3V84_01155;Dbxref=NCBI_GP:TMR48551.1;Name=TMR48551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358516.1;locus_tag=E3V84_01155;product=thymidine kinase;protein_id=TMR48551.1;transl_table=11 SOQE01000010.1 Genbank gene 56547 57026 . + . ID=gene-E3V84_01160;Name=E3V84_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01160 SOQE01000010.1 Protein Homology CDS 56547 57026 . + 0 ID=cds-TMR48552.1;Parent=gene-E3V84_01160;Dbxref=NCBI_GP:TMR48552.1;Name=TMR48552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358517.1;locus_tag=E3V84_01160;product=GNAT family N-acetyltransferase;protein_id=TMR48552.1;transl_table=11 SOQE01000010.1 Genbank gene 57036 58115 . + . ID=gene-E3V84_01165;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=E3V84_01165 SOQE01000010.1 Protein Homology CDS 57036 58115 . + 0 ID=cds-TMR48553.1;Parent=gene-E3V84_01165;Dbxref=NCBI_GP:TMR48553.1;Name=TMR48553.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358518.1;locus_tag=E3V84_01165;product=peptide chain release factor 1;protein_id=TMR48553.1;transl_table=11 SOQE01000010.1 Genbank gene 58115 58951 . + . ID=gene-E3V84_01170;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=E3V84_01170 SOQE01000010.1 Protein Homology CDS 58115 58951 . + 0 ID=cds-TMR48554.1;Parent=gene-E3V84_01170;Dbxref=NCBI_GP:TMR48554.1;Name=TMR48554.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358519.1;locus_tag=E3V84_01170;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=TMR48554.1;transl_table=11 SOQE01000010.1 Genbank gene 58908 59537 . + . ID=gene-E3V84_01175;Name=E3V84_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01175 SOQE01000010.1 Protein Homology CDS 58908 59537 . + 0 ID=cds-TMR48555.1;Parent=gene-E3V84_01175;Dbxref=NCBI_GP:TMR48555.1;Name=TMR48555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446237.1;locus_tag=E3V84_01175;product=threonylcarbamoyl-AMP synthase;protein_id=TMR48555.1;transl_table=11 SOQE01000010.1 Genbank gene 59539 59970 . + . ID=gene-E3V84_01180;Name=E3V84_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01180 SOQE01000010.1 Protein Homology CDS 59539 59970 . + 0 ID=cds-TMR48556.1;Parent=gene-E3V84_01180;Dbxref=NCBI_GP:TMR48556.1;Name=TMR48556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446236.1;locus_tag=E3V84_01180;product=GNAT family N-acetyltransferase;protein_id=TMR48556.1;transl_table=11 SOQE01000010.1 Genbank gene 60033 61289 . + . ID=gene-E3V84_01185;Name=E3V84_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01185 SOQE01000010.1 Protein Homology CDS 60033 61289 . + 0 ID=cds-TMR48557.1;Parent=gene-E3V84_01185;Dbxref=NCBI_GP:TMR48557.1;Name=TMR48557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358522.1;locus_tag=E3V84_01185;product=serine hydroxymethyltransferase;protein_id=TMR48557.1;transl_table=11 SOQE01000010.1 Genbank gene 61297 62271 . + . ID=gene-E3V84_01190;Name=E3V84_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01190 SOQE01000010.1 Protein Homology CDS 61297 62271 . + 0 ID=cds-TMR48558.1;Parent=gene-E3V84_01190;Dbxref=NCBI_GP:TMR48558.1;Name=TMR48558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035114.1;locus_tag=E3V84_01190;product=nucleoid-associated protein;protein_id=TMR48558.1;transl_table=11 SOQE01000010.1 Genbank gene 62271 62885 . + . ID=gene-E3V84_01195;Name=E3V84_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01195 SOQE01000010.1 Protein Homology CDS 62271 62885 . + 0 ID=cds-TMR48559.1;Parent=gene-E3V84_01195;Dbxref=NCBI_GP:TMR48559.1;Name=TMR48559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446233.1;locus_tag=E3V84_01195;product=lysozyme family protein;protein_id=TMR48559.1;transl_table=11 SOQE01000010.1 Genbank gene 62959 63933 . + . ID=gene-E3V84_01200;Name=E3V84_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01200 SOQE01000010.1 Protein Homology CDS 62959 63933 . + 0 ID=cds-TMR48560.1;Parent=gene-E3V84_01200;Dbxref=NCBI_GP:TMR48560.1;Name=TMR48560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358525.1;locus_tag=E3V84_01200;product=DUF1002 domain-containing protein;protein_id=TMR48560.1;transl_table=11 SOQE01000010.1 Genbank gene 64007 65362 . + . ID=gene-E3V84_01205;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=E3V84_01205 SOQE01000010.1 Protein Homology CDS 64007 65362 . + 0 ID=cds-TMR48561.1;Parent=gene-E3V84_01205;Dbxref=NCBI_GP:TMR48561.1;Name=TMR48561.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000914555.1;locus_tag=E3V84_01205;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TMR48561.1;transl_table=11 SOQE01000010.1 Genbank gene 65892 66614 . + . ID=gene-E3V84_01210;Name=E3V84_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01210 SOQE01000010.1 Protein Homology CDS 65892 66614 . + 0 ID=cds-TMR48562.1;Parent=gene-E3V84_01210;Dbxref=NCBI_GP:TMR48562.1;Name=TMR48562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903423.1;locus_tag=E3V84_01210;product=MurR/RpiR family transcriptional regulator;protein_id=TMR48562.1;transl_table=11 SOQE01000010.1 Genbank gene 66623 67375 . + . ID=gene-E3V84_01215;Name=E3V84_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01215 SOQE01000010.1 Protein Homology CDS 66623 67375 . + 0 ID=cds-TMR48563.1;Parent=gene-E3V84_01215;Dbxref=NCBI_GP:TMR48563.1;Name=TMR48563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014478.1;locus_tag=E3V84_01215;product=MurR/RpiR family transcriptional regulator;protein_id=TMR48563.1;transl_table=11 SOQE01000010.1 Genbank gene 67524 68954 . + . ID=gene-E3V84_01220;Name=E3V84_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01220 SOQE01000010.1 Protein Homology CDS 67524 68954 . + 0 ID=cds-TMR48564.1;Parent=gene-E3V84_01220;Dbxref=NCBI_GP:TMR48564.1;Name=TMR48564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003486.1;locus_tag=E3V84_01220;product=glycosyl hydrolase family protein;protein_id=TMR48564.1;transl_table=11 SOQE01000010.1 Genbank gene 68967 69269 . + . ID=gene-E3V84_01225;Name=E3V84_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01225 SOQE01000010.1 Protein Homology CDS 68967 69269 . + 0 ID=cds-TMR48565.1;Parent=gene-E3V84_01225;Dbxref=NCBI_GP:TMR48565.1;Name=TMR48565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020606.1;locus_tag=E3V84_01225;product=PTS sugar transporter subunit IIB;protein_id=TMR48565.1;transl_table=11 SOQE01000010.1 Genbank gene 69280 70593 . + . ID=gene-E3V84_01230;Name=E3V84_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01230 SOQE01000010.1 Protein Homology CDS 69280 70593 . + 0 ID=cds-TMR48566.1;Parent=gene-E3V84_01230;Dbxref=NCBI_GP:TMR48566.1;Name=TMR48566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003586.1;locus_tag=E3V84_01230;product=PTS sugar transporter subunit IIC;protein_id=TMR48566.1;transl_table=11 SOQE01000010.1 Genbank gene 70607 70927 . + . ID=gene-E3V84_01235;Name=E3V84_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01235 SOQE01000010.1 Protein Homology CDS 70607 70927 . + 0 ID=cds-TMR48567.1;Parent=gene-E3V84_01235;Dbxref=NCBI_GP:TMR48567.1;Name=TMR48567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003528.1;locus_tag=E3V84_01235;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=TMR48567.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 70936 72353 . + . ID=gene-E3V84_01240;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=pseudogene;locus_tag=E3V84_01240;pseudo=true SOQE01000010.1 Protein Homology CDS 70936 72353 . + 0 ID=cds-E3V84_01240;Parent=gene-E3V84_01240;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gtfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638368.1;locus_tag=E3V84_01240;product=sucrose phosphorylase;pseudo=true;transl_table=11 SOQE01000010.1 Genbank pseudogene 72615 73359 . + . ID=gene-E3V84_01245;Name=E3V84_01245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01245;pseudo=true SOQE01000010.1 Protein Homology CDS 72615 73359 . + 0 ID=cds-E3V84_01245;Parent=gene-E3V84_01245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134977.1;locus_tag=E3V84_01245;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 73828 74394 . + . ID=gene-E3V84_01250;Name=E3V84_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01250 SOQE01000010.1 Protein Homology CDS 73828 74394 . + 0 ID=cds-TMR48568.1;Parent=gene-E3V84_01250;Dbxref=NCBI_GP:TMR48568.1;Name=TMR48568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446230.1;locus_tag=E3V84_01250;product=hypothetical protein;protein_id=TMR48568.1;transl_table=11 SOQE01000010.1 Genbank gene 74715 74903 . + . ID=gene-E3V84_01255;Name=E3V84_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01255 SOQE01000010.1 Protein Homology CDS 74715 74903 . + 0 ID=cds-TMR48569.1;Parent=gene-E3V84_01255;Dbxref=NCBI_GP:TMR48569.1;Name=TMR48569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446229.1;locus_tag=E3V84_01255;product=CopG family transcriptional regulator;protein_id=TMR48569.1;transl_table=11 SOQE01000010.1 Genbank gene 74966 75730 . + . ID=gene-E3V84_01260;Name=E3V84_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01260 SOQE01000010.1 Protein Homology CDS 74966 75730 . + 0 ID=cds-TMR48570.1;Parent=gene-E3V84_01260;Dbxref=NCBI_GP:TMR48570.1;Name=TMR48570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446228.1;locus_tag=E3V84_01260;product=DUF4343 domain-containing protein;protein_id=TMR48570.1;transl_table=11 SOQE01000010.1 Genbank gene 75861 76229 . + . ID=gene-E3V84_01265;Name=E3V84_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01265 SOQE01000010.1 GeneMarkS-2+ CDS 75861 76229 . + 0 ID=cds-TMR48571.1;Parent=gene-E3V84_01265;Dbxref=NCBI_GP:TMR48571.1;Name=TMR48571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_01265;product=hypothetical protein;protein_id=TMR48571.1;transl_table=11 SOQE01000010.1 Genbank gene 76299 76544 . + . ID=gene-E3V84_01270;Name=E3V84_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01270 SOQE01000010.1 Protein Homology CDS 76299 76544 . + 0 ID=cds-TMR48572.1;Parent=gene-E3V84_01270;Dbxref=NCBI_GP:TMR48572.1;Name=TMR48572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536918.1;locus_tag=E3V84_01270;product=hypothetical protein;protein_id=TMR48572.1;transl_table=11 SOQE01000010.1 Genbank gene 76785 77129 . + . ID=gene-E3V84_01275;Name=E3V84_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01275 SOQE01000010.1 Protein Homology CDS 76785 77129 . + 0 ID=cds-TMR48573.1;Parent=gene-E3V84_01275;Dbxref=NCBI_GP:TMR48573.1;Name=TMR48573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446227.1;locus_tag=E3V84_01275;product=hypothetical protein;protein_id=TMR48573.1;transl_table=11 SOQE01000010.1 Genbank gene 77205 78488 . + . ID=gene-E3V84_01280;Name=E3V84_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01280 SOQE01000010.1 Protein Homology CDS 77205 78488 . + 0 ID=cds-TMR48574.1;Parent=gene-E3V84_01280;Dbxref=NCBI_GP:TMR48574.1;Name=TMR48574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446226.1;locus_tag=E3V84_01280;product=cellulose synthase;protein_id=TMR48574.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 79032 79348 . + . ID=gene-E3V84_01285;Name=E3V84_01285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01285;pseudo=true SOQE01000010.1 Protein Homology CDS 79032 79348 . + 0 ID=cds-E3V84_01285;Parent=gene-E3V84_01285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558199.1;locus_tag=E3V84_01285;product=transposase family protein;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 79502 80725 . + . ID=gene-E3V84_01290;Name=E3V84_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01290 SOQE01000010.1 Protein Homology CDS 79502 80725 . + 0 ID=cds-TMR48575.1;Parent=gene-E3V84_01290;Dbxref=NCBI_GP:TMR48575.1;Name=TMR48575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358567.1;locus_tag=E3V84_01290;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=TMR48575.1;transl_table=11 SOQE01000010.1 Genbank gene 80750 83446 . + . ID=gene-E3V84_01295;Name=E3V84_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01295 SOQE01000010.1 Protein Homology CDS 80750 83446 . + 0 ID=cds-TMR48576.1;Parent=gene-E3V84_01295;Dbxref=NCBI_GP:TMR48576.1;Name=TMR48576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358568.1;locus_tag=E3V84_01295;product=phosphoenolpyruvate carboxylase;protein_id=TMR48576.1;transl_table=11 SOQE01000010.1 Genbank gene 83998 85002 . + . ID=gene-E3V84_01300;Name=E3V84_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01300 SOQE01000010.1 Protein Homology CDS 83998 85002 . + 0 ID=cds-TMR48577.1;Parent=gene-E3V84_01300;Dbxref=NCBI_GP:TMR48577.1;Name=TMR48577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446100.1;locus_tag=E3V84_01300;product=peptide ABC transporter substrate-binding protein;protein_id=TMR48577.1;transl_table=11 SOQE01000010.1 Genbank gene 85071 85937 . + . ID=gene-E3V84_01305;Name=E3V84_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01305 SOQE01000010.1 Protein Homology CDS 85071 85937 . + 0 ID=cds-TMR48578.1;Parent=gene-E3V84_01305;Dbxref=NCBI_GP:TMR48578.1;Name=TMR48578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446101.1;locus_tag=E3V84_01305;product=ABC transporter permease;protein_id=TMR48578.1;transl_table=11 SOQE01000010.1 Genbank gene 85934 86692 . + . ID=gene-E3V84_01310;Name=E3V84_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01310 SOQE01000010.1 Protein Homology CDS 85934 86692 . + 0 ID=cds-TMR48579.1;Parent=gene-E3V84_01310;Dbxref=NCBI_GP:TMR48579.1;Name=TMR48579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358571.1;locus_tag=E3V84_01310;product=ABC transporter ATP-binding protein;protein_id=TMR48579.1;transl_table=11 SOQE01000010.1 Genbank gene 86782 88542 . + . ID=gene-E3V84_01315;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=E3V84_01315 SOQE01000010.1 Protein Homology CDS 86782 88542 . + 0 ID=cds-TMR48580.1;Parent=gene-E3V84_01315;Dbxref=NCBI_GP:TMR48580.1;Name=TMR48580.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446103.1;locus_tag=E3V84_01315;product=DNA primase;protein_id=TMR48580.1;transl_table=11 SOQE01000010.1 Genbank gene 88545 89654 . + . ID=gene-E3V84_01320;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=E3V84_01320 SOQE01000010.1 Protein Homology CDS 88545 89654 . + 0 ID=cds-TMR48581.1;Parent=gene-E3V84_01320;Dbxref=NCBI_GP:TMR48581.1;Name=TMR48581.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358573.1;locus_tag=E3V84_01320;product=RNA polymerase sigma factor RpoD;protein_id=TMR48581.1;transl_table=11 SOQE01000010.1 Genbank gene 89669 89998 . + . ID=gene-E3V84_01325;Name=E3V84_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01325 SOQE01000010.1 Protein Homology CDS 89669 89998 . + 0 ID=cds-TMR48582.1;Parent=gene-E3V84_01325;Dbxref=NCBI_GP:TMR48582.1;Name=TMR48582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446105.1;locus_tag=E3V84_01325;product=metal-sulfur cluster assembly factor;protein_id=TMR48582.1;transl_table=11 SOQE01000010.1 Genbank gene 90141 91157 . + . ID=gene-E3V84_01330;Name=E3V84_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01330 SOQE01000010.1 Protein Homology CDS 90141 91157 . + 0 ID=cds-TMR48606.1;Parent=gene-E3V84_01330;Dbxref=NCBI_GP:TMR48606.1;Name=TMR48606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446106.1;locus_tag=E3V84_01330;product=glycosyltransferase;protein_id=TMR48606.1;transl_table=11 SOQE01000010.1 Genbank gene 91173 92498 . + . ID=gene-E3V84_01335;Name=E3V84_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01335 SOQE01000010.1 Protein Homology CDS 91173 92498 . + 0 ID=cds-TMR48583.1;Parent=gene-E3V84_01335;Dbxref=NCBI_GP:TMR48583.1;Name=TMR48583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358576.1;locus_tag=E3V84_01335;product=glycosyltransferase family 4 protein;protein_id=TMR48583.1;transl_table=11 SOQE01000010.1 Genbank gene 92527 92703 . + . ID=gene-E3V84_01340;Name=E3V84_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01340 SOQE01000010.1 Protein Homology CDS 92527 92703 . + 0 ID=cds-TMR48607.1;Parent=gene-E3V84_01340;Dbxref=NCBI_GP:TMR48607.1;Name=TMR48607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358577.1;locus_tag=E3V84_01340;product=PspC domain-containing protein;protein_id=TMR48607.1;transl_table=11 SOQE01000010.1 Genbank gene 92762 92896 . + . ID=gene-E3V84_01345;Name=E3V84_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01345 SOQE01000010.1 Protein Homology CDS 92762 92896 . + 0 ID=cds-TMR48584.1;Parent=gene-E3V84_01345;Dbxref=NCBI_GP:TMR48584.1;Name=TMR48584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446109.1;locus_tag=E3V84_01345;product=DUF4044 domain-containing protein;protein_id=TMR48584.1;transl_table=11 SOQE01000010.1 Genbank gene 92960 94270 . + . ID=gene-E3V84_01350;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=E3V84_01350 SOQE01000010.1 Protein Homology CDS 92960 94270 . + 0 ID=cds-TMR48585.1;Parent=gene-E3V84_01350;Dbxref=NCBI_GP:TMR48585.1;Name=TMR48585.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446110.1;locus_tag=E3V84_01350;product=GTPase ObgE;protein_id=TMR48585.1;transl_table=11 SOQE01000010.1 Genbank gene 94280 94438 . + . ID=gene-E3V84_01355;Name=E3V84_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01355 SOQE01000010.1 Protein Homology CDS 94280 94438 . + 0 ID=cds-TMR48586.1;Parent=gene-E3V84_01355;Dbxref=NCBI_GP:TMR48586.1;Name=TMR48586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446111.1;locus_tag=E3V84_01355;product=hypothetical protein;protein_id=TMR48586.1;transl_table=11 SOQE01000010.1 Genbank gene 95175 95354 . - . ID=gene-E3V84_01360;Name=E3V84_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01360 SOQE01000010.1 Protein Homology CDS 95175 95354 . - 0 ID=cds-TMR48587.1;Parent=gene-E3V84_01360;Dbxref=NCBI_GP:TMR48587.1;Name=TMR48587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=E3V84_01360;product=hypothetical protein;protein_id=TMR48587.1;transl_table=11 SOQE01000010.1 Genbank pseudogene 95386 95460 . - . ID=gene-E3V84_01365;Name=E3V84_01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01365;pseudo=true SOQE01000010.1 Protein Homology CDS 95386 95460 . - 0 ID=cds-E3V84_01365;Parent=gene-E3V84_01365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_01365;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000010.1 Genbank gene 95595 96854 . + . ID=gene-E3V84_01370;Name=E3V84_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01370 SOQE01000010.1 Protein Homology CDS 95595 96854 . + 0 ID=cds-TMR48588.1;Parent=gene-E3V84_01370;Dbxref=NCBI_GP:TMR48588.1;Name=TMR48588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227095.1;locus_tag=E3V84_01370;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMR48588.1;transl_table=11 SOQE01000010.1 Genbank gene 96870 97421 . + . ID=gene-E3V84_01375;Name=E3V84_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01375 SOQE01000010.1 Protein Homology CDS 96870 97421 . + 0 ID=cds-TMR48589.1;Parent=gene-E3V84_01375;Dbxref=NCBI_GP:TMR48589.1;Name=TMR48589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446267.1;locus_tag=E3V84_01375;product=N-acetyltransferase;protein_id=TMR48589.1;transl_table=11 SOQE01000010.1 Genbank gene 97414 98691 . + . ID=gene-E3V84_01380;Name=E3V84_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01380 SOQE01000010.1 Protein Homology CDS 97414 98691 . + 0 ID=cds-TMR48590.1;Parent=gene-E3V84_01380;Dbxref=NCBI_GP:TMR48590.1;Name=TMR48590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358585.1;locus_tag=E3V84_01380;product=CBS domain-containing protein;protein_id=TMR48590.1;transl_table=11 SOQE01000010.1 Genbank gene 98707 99567 . + . ID=gene-E3V84_01385;Name=E3V84_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01385 SOQE01000010.1 Protein Homology CDS 98707 99567 . + 0 ID=cds-TMR48591.1;Parent=gene-E3V84_01385;Dbxref=NCBI_GP:TMR48591.1;Name=TMR48591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014622584.1;locus_tag=E3V84_01385;product=methionyl aminopeptidase;protein_id=TMR48591.1;transl_table=11 SOQE01000010.1 Genbank gene 99792 99920 . + . ID=gene-E3V84_01390;Name=E3V84_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01390 SOQE01000010.1 Protein Homology CDS 99792 99920 . + 0 ID=cds-TMR48592.1;Parent=gene-E3V84_01390;Dbxref=NCBI_GP:TMR48592.1;Name=TMR48592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284964.1;locus_tag=E3V84_01390;product=galactose-6-phosphate isomerase;protein_id=TMR48592.1;transl_table=11 SOQE01000010.1 Genbank gene 100084 102375 . + . ID=gene-E3V84_01395;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=E3V84_01395 SOQE01000010.1 Protein Homology CDS 100084 102375 . + 0 ID=cds-TMR48593.1;Parent=gene-E3V84_01395;Dbxref=NCBI_GP:TMR48593.1;Name=TMR48593.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446302.1;locus_tag=E3V84_01395;product=DNA helicase PcrA;protein_id=TMR48593.1;transl_table=11 SOQE01000010.1 Genbank gene 102418 103098 . + . ID=gene-E3V84_01400;Name=E3V84_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01400 SOQE01000010.1 Protein Homology CDS 102418 103098 . + 0 ID=cds-TMR48594.1;Parent=gene-E3V84_01400;Dbxref=NCBI_GP:TMR48594.1;Name=TMR48594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446301.1;locus_tag=E3V84_01400;product=JAB domain-containing protein;protein_id=TMR48594.1;transl_table=11 SOQE01000010.1 Genbank gene 103095 103784 . - . ID=gene-E3V84_01405;Name=E3V84_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01405 SOQE01000010.1 Protein Homology CDS 103095 103784 . - 0 ID=cds-TMR48595.1;Parent=gene-E3V84_01405;Dbxref=NCBI_GP:TMR48595.1;Name=TMR48595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446300.1;locus_tag=E3V84_01405;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=TMR48595.1;transl_table=11 SOQE01000010.1 Genbank gene 103802 104443 . - . ID=gene-E3V84_01410;Name=E3V84_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01410 SOQE01000010.1 Protein Homology CDS 103802 104443 . - 0 ID=cds-TMR48596.1;Parent=gene-E3V84_01410;Dbxref=NCBI_GP:TMR48596.1;Name=TMR48596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358592.1;locus_tag=E3V84_01410;product=redox-sensing transcriptional repressor Rex;protein_id=TMR48596.1;transl_table=11 SOQE01000010.1 Genbank gene 104526 104777 . - . ID=gene-E3V84_01415;Name=E3V84_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01415 SOQE01000010.1 Protein Homology CDS 104526 104777 . - 0 ID=cds-TMR48597.1;Parent=gene-E3V84_01415;Dbxref=NCBI_GP:TMR48597.1;Name=TMR48597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446298.1;locus_tag=E3V84_01415;product=DUF4649 family protein;protein_id=TMR48597.1;transl_table=11 SOQE01000010.1 Genbank gene 104749 105096 . - . ID=gene-E3V84_01420;Name=E3V84_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01420 SOQE01000010.1 Protein Homology CDS 104749 105096 . - 0 ID=cds-TMR48598.1;Parent=gene-E3V84_01420;Dbxref=NCBI_GP:TMR48598.1;Name=TMR48598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358594.1;locus_tag=E3V84_01420;product=cysteine desulfurase;protein_id=TMR48598.1;transl_table=11 SOQE01000010.1 Genbank gene 105101 106216 . - . ID=gene-E3V84_01425;Name=E3V84_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01425 SOQE01000010.1 Protein Homology CDS 105101 106216 . - 0 ID=cds-TMR48599.1;Parent=gene-E3V84_01425;Dbxref=NCBI_GP:TMR48599.1;Name=TMR48599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358595.1;locus_tag=E3V84_01425;product=cysteine desulfurase;protein_id=TMR48599.1;transl_table=11 SOQE01000010.1 Genbank gene 106226 107185 . - . ID=gene-E3V84_01430;Name=E3V84_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01430 SOQE01000010.1 Protein Homology CDS 106226 107185 . - 0 ID=cds-TMR48600.1;Parent=gene-E3V84_01430;Dbxref=NCBI_GP:TMR48600.1;Name=TMR48600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358596.1;locus_tag=E3V84_01430;product=ribose-phosphate diphosphokinase;protein_id=TMR48600.1;transl_table=11 SOQE01000010.1 Genbank gene 107298 107867 . - . ID=gene-E3V84_01435;Name=E3V84_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01435 SOQE01000010.1 Protein Homology CDS 107298 107867 . - 0 ID=cds-TMR48601.1;Parent=gene-E3V84_01435;Dbxref=NCBI_GP:TMR48601.1;Name=TMR48601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358597.1;locus_tag=E3V84_01435;product=CYTH domain-containing protein;protein_id=TMR48601.1;transl_table=11 SOQE01000010.1 Genbank gene 108000 109145 . - . ID=gene-E3V84_01440;Name=E3V84_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01440 SOQE01000010.1 Protein Homology CDS 108000 109145 . - 0 ID=cds-TMR48602.1;Parent=gene-E3V84_01440;Dbxref=NCBI_GP:TMR48602.1;Name=TMR48602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592975.1;locus_tag=E3V84_01440;product=site-specific integrase;protein_id=TMR48602.1;transl_table=11 SOQE01000010.1 Genbank gene 109201 109443 . + . ID=gene-E3V84_01445;Name=E3V84_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01445 SOQE01000010.1 Protein Homology CDS 109201 109443 . + 0 ID=cds-TMR48603.1;Parent=gene-E3V84_01445;Dbxref=NCBI_GP:TMR48603.1;Name=TMR48603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823205.1;locus_tag=E3V84_01445;product=hypothetical protein;protein_id=TMR48603.1;transl_table=11 ##sequence-region SOQE01000100.1 1 1142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000100.1 Genbank region 1 1142 . + . ID=SOQE01000100.1:1..1142;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000100.1 Genbank gene 1 191 . - . ID=gene-E3V84_10460;Name=E3V84_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10460;partial=true;start_range=.,1 SOQE01000100.1 Protein Homology CDS 1 191 . - 0 ID=cds-TMR43584.1;Parent=gene-E3V84_10460;Dbxref=NCBI_GP:TMR43584.1;Name=TMR43584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067623.1;locus_tag=E3V84_10460;partial=true;product=DUF3310 domain-containing protein;protein_id=TMR43584.1;start_range=.,1;transl_table=11 SOQE01000100.1 Genbank gene 188 610 . - . ID=gene-E3V84_10465;Name=E3V84_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10465 SOQE01000100.1 Protein Homology CDS 188 610 . - 0 ID=cds-TMR43585.1;Parent=gene-E3V84_10465;Dbxref=NCBI_GP:TMR43585.1;Name=TMR43585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187974.1;locus_tag=E3V84_10465;product=hypothetical protein;protein_id=TMR43585.1;transl_table=11 SOQE01000100.1 Genbank gene 607 1098 . - . ID=gene-E3V84_10470;Name=E3V84_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10470 SOQE01000100.1 Protein Homology CDS 607 1098 . - 0 ID=cds-TMR43586.1;Parent=gene-E3V84_10470;Dbxref=NCBI_GP:TMR43586.1;Name=TMR43586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022916.1;locus_tag=E3V84_10470;product=DNA-binding protein;protein_id=TMR43586.1;transl_table=11 ##sequence-region SOQE01000101.1 1 12670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000101.1 Genbank region 1 12670 . + . ID=SOQE01000101.1:1..12670;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000101.1 Genbank gene 1 260 . - . ID=gene-E3V84_10475;Name=E3V84_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10475;partial=true;start_range=.,1 SOQE01000101.1 Protein Homology CDS 1 260 . - 0 ID=cds-TMR43547.1;Parent=gene-E3V84_10475;Dbxref=NCBI_GP:TMR43547.1;Name=TMR43547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_10475;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR43547.1;start_range=.,1;transl_table=11 SOQE01000101.1 Genbank gene 269 1474 . - . ID=gene-E3V84_10480;Name=E3V84_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10480 SOQE01000101.1 Protein Homology CDS 269 1474 . - 0 ID=cds-TMR43548.1;Parent=gene-E3V84_10480;Dbxref=NCBI_GP:TMR43548.1;Name=TMR43548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447064.1;locus_tag=E3V84_10480;product=argininosuccinate synthase;protein_id=TMR43548.1;transl_table=11 SOQE01000101.1 Genbank gene 1491 2297 . - . ID=gene-E3V84_10485;Name=E3V84_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10485 SOQE01000101.1 Protein Homology CDS 1491 2297 . - 0 ID=cds-TMR43549.1;Parent=gene-E3V84_10485;Dbxref=NCBI_GP:TMR43549.1;Name=TMR43549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447065.1;locus_tag=E3V84_10485;product=transporter substrate-binding domain-containing protein;protein_id=TMR43549.1;transl_table=11 SOQE01000101.1 Genbank gene 2504 3145 . - . ID=gene-E3V84_10490;Name=E3V84_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10490 SOQE01000101.1 Protein Homology CDS 2504 3145 . - 0 ID=cds-TMR43550.1;Parent=gene-E3V84_10490;Dbxref=NCBI_GP:TMR43550.1;Name=TMR43550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447066.1;locus_tag=E3V84_10490;product=ABC transporter ATP-binding protein;protein_id=TMR43550.1;transl_table=11 SOQE01000101.1 Genbank gene 3142 5250 . - . ID=gene-E3V84_10495;Name=E3V84_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10495 SOQE01000101.1 Protein Homology CDS 3142 5250 . - 0 ID=cds-TMR43551.1;Parent=gene-E3V84_10495;Dbxref=NCBI_GP:TMR43551.1;Name=TMR43551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357693.1;locus_tag=E3V84_10495;product=bacteriocin-associated integral membrane family protein;protein_id=TMR43551.1;transl_table=11 SOQE01000101.1 Genbank gene 5536 6123 . - . ID=gene-E3V84_10500;Name=E3V84_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10500 SOQE01000101.1 Protein Homology CDS 5536 6123 . - 0 ID=cds-TMR43552.1;Parent=gene-E3V84_10500;Dbxref=NCBI_GP:TMR43552.1;Name=TMR43552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447068.1;locus_tag=E3V84_10500;product=hypothetical protein;protein_id=TMR43552.1;transl_table=11 SOQE01000101.1 Genbank gene 6627 7355 . - . ID=gene-E3V84_10505;Name=E3V84_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10505 SOQE01000101.1 Protein Homology CDS 6627 7355 . - 0 ID=cds-TMR43553.1;Parent=gene-E3V84_10505;Dbxref=NCBI_GP:TMR43553.1;Name=TMR43553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358873.1;locus_tag=E3V84_10505;product=ABC transporter permease;protein_id=TMR43553.1;transl_table=11 SOQE01000101.1 Genbank gene 7371 8216 . - . ID=gene-E3V84_10510;Name=E3V84_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10510 SOQE01000101.1 Protein Homology CDS 7371 8216 . - 0 ID=cds-TMR43554.1;Parent=gene-E3V84_10510;Dbxref=NCBI_GP:TMR43554.1;Name=TMR43554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452046.1;locus_tag=E3V84_10510;product=ABC transporter ATP-binding protein;protein_id=TMR43554.1;transl_table=11 SOQE01000101.1 Genbank gene 8397 9260 . + . ID=gene-E3V84_10515;Name=E3V84_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10515 SOQE01000101.1 Protein Homology CDS 8397 9260 . + 0 ID=cds-TMR43555.1;Parent=gene-E3V84_10515;Dbxref=NCBI_GP:TMR43555.1;Name=TMR43555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447073.1;locus_tag=E3V84_10515;product=XRE family transcriptional regulator;protein_id=TMR43555.1;transl_table=11 SOQE01000101.1 Genbank gene 9312 9935 . - . ID=gene-E3V84_10520;Name=E3V84_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10520 SOQE01000101.1 Protein Homology CDS 9312 9935 . - 0 ID=cds-TMR43556.1;Parent=gene-E3V84_10520;Dbxref=NCBI_GP:TMR43556.1;Name=TMR43556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357690.1;locus_tag=E3V84_10520;product=LysM domain-containing protein;protein_id=TMR43556.1;transl_table=11 SOQE01000101.1 Genbank gene 10177 10848 . + . ID=gene-E3V84_10525;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=E3V84_10525 SOQE01000101.1 Protein Homology CDS 10177 10848 . + 0 ID=cds-TMR43557.1;Parent=gene-E3V84_10525;Dbxref=NCBI_GP:TMR43557.1;Name=TMR43557.1;gbkey=CDS;gene=sdaAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357689.1;locus_tag=E3V84_10525;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit beta;protein_id=TMR43557.1;transl_table=11 SOQE01000101.1 Genbank gene 10857 11729 . + . ID=gene-E3V84_10530;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=E3V84_10530 SOQE01000101.1 Protein Homology CDS 10857 11729 . + 0 ID=cds-TMR43558.1;Parent=gene-E3V84_10530;Dbxref=NCBI_GP:TMR43558.1;Name=TMR43558.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357688.1;locus_tag=E3V84_10530;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=TMR43558.1;transl_table=11 SOQE01000101.1 Genbank gene 11751 12383 . + . ID=gene-E3V84_10535;Name=E3V84_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10535 SOQE01000101.1 Protein Homology CDS 11751 12383 . + 0 ID=cds-TMR43559.1;Parent=gene-E3V84_10535;Dbxref=NCBI_GP:TMR43559.1;Name=TMR43559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447077.1;locus_tag=E3V84_10535;product=HAD family hydrolase;protein_id=TMR43559.1;transl_table=11 SOQE01000101.1 Genbank gene 12433 12670 . + . ID=gene-E3V84_10540;Name=E3V84_10540;end_range=12670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10540;partial=true SOQE01000101.1 Protein Homology CDS 12433 12670 . + 0 ID=cds-TMR43560.1;Parent=gene-E3V84_10540;Dbxref=NCBI_GP:TMR43560.1;Name=TMR43560.1;end_range=12670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_10540;partial=true;product=hypothetical protein;protein_id=TMR43560.1;transl_table=11 ##sequence-region SOQE01000102.1 1 19314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000102.1 Genbank region 1 19314 . + . ID=SOQE01000102.1:1..19314;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000102.1 Genbank gene 220 936 . + . ID=gene-E3V84_10545;Name=E3V84_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10545 SOQE01000102.1 Protein Homology CDS 220 936 . + 0 ID=cds-TMR43518.1;Parent=gene-E3V84_10545;Dbxref=NCBI_GP:TMR43518.1;Name=TMR43518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088325.1;locus_tag=E3V84_10545;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TMR43518.1;transl_table=11 SOQE01000102.1 Genbank gene 952 1038 . + . ID=gene-E3V84_10550;Name=E3V84_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10550 SOQE01000102.1 Protein Homology CDS 952 1038 . + 0 ID=cds-TMR43539.1;Parent=gene-E3V84_10550;Dbxref=NCBI_GP:TMR43539.1;Name=TMR43539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809295.1;locus_tag=E3V84_10550;product=single-stranded DNA-binding protein;protein_id=TMR43539.1;transl_table=11 SOQE01000102.1 Genbank gene 1094 1564 . + . ID=gene-E3V84_10555;Name=E3V84_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10555 SOQE01000102.1 Protein Homology CDS 1094 1564 . + 0 ID=cds-TMR43519.1;Parent=gene-E3V84_10555;Dbxref=NCBI_GP:TMR43519.1;Name=TMR43519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517879.1;locus_tag=E3V84_10555;product=MarR family transcriptional regulator;protein_id=TMR43519.1;transl_table=11 SOQE01000102.1 Genbank gene 1539 3308 . + . ID=gene-E3V84_10560;Name=E3V84_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10560 SOQE01000102.1 Protein Homology CDS 1539 3308 . + 0 ID=cds-TMR43520.1;Parent=gene-E3V84_10560;Dbxref=NCBI_GP:TMR43520.1;Name=TMR43520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446935.1;locus_tag=E3V84_10560;product=ABC transporter ATP-binding protein;protein_id=TMR43520.1;transl_table=11 SOQE01000102.1 Genbank gene 3298 5058 . + . ID=gene-E3V84_10565;Name=E3V84_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10565 SOQE01000102.1 Protein Homology CDS 3298 5058 . + 0 ID=cds-TMR43521.1;Parent=gene-E3V84_10565;Dbxref=NCBI_GP:TMR43521.1;Name=TMR43521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446934.1;locus_tag=E3V84_10565;product=ABC transporter ATP-binding protein;protein_id=TMR43521.1;transl_table=11 SOQE01000102.1 Genbank pseudogene 5142 5658 . + . ID=gene-E3V84_10570;Name=E3V84_10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10570;pseudo=true SOQE01000102.1 Protein Homology CDS 5142 5658 . + 0 ID=cds-E3V84_10570;Parent=gene-E3V84_10570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446933.1;locus_tag=E3V84_10570;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 SOQE01000102.1 Genbank pseudogene 5704 5772 . - . ID=gene-E3V84_10575;Name=E3V84_10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10575;pseudo=true SOQE01000102.1 Protein Homology CDS 5704 5772 . - 0 ID=cds-E3V84_10575;Parent=gene-E3V84_10575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_10575;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000102.1 Genbank gene 5878 6324 . + . ID=gene-E3V84_10580;Name=E3V84_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10580 SOQE01000102.1 Protein Homology CDS 5878 6324 . + 0 ID=cds-TMR43522.1;Parent=gene-E3V84_10580;Dbxref=NCBI_GP:TMR43522.1;Name=TMR43522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446932.1;locus_tag=E3V84_10580;product=response regulator transcription factor;protein_id=TMR43522.1;transl_table=11 SOQE01000102.1 Genbank gene 6329 7003 . + . ID=gene-E3V84_10585;Name=E3V84_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10585 SOQE01000102.1 Protein Homology CDS 6329 7003 . + 0 ID=cds-TMR43523.1;Parent=gene-E3V84_10585;Dbxref=NCBI_GP:TMR43523.1;Name=TMR43523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446931.1;locus_tag=E3V84_10585;product=hypothetical protein;protein_id=TMR43523.1;transl_table=11 SOQE01000102.1 Genbank gene 7254 7442 . + . ID=gene-E3V84_10590;Name=E3V84_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10590 SOQE01000102.1 Protein Homology CDS 7254 7442 . + 0 ID=cds-TMR43524.1;Parent=gene-E3V84_10590;Dbxref=NCBI_GP:TMR43524.1;Name=TMR43524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647592.1;locus_tag=E3V84_10590;product=choline-binding protein A;protein_id=TMR43524.1;transl_table=11 SOQE01000102.1 Genbank gene 7433 7534 . + . ID=gene-E3V84_10595;Name=E3V84_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10595 SOQE01000102.1 Protein Homology CDS 7433 7534 . + 0 ID=cds-TMR43540.1;Parent=gene-E3V84_10595;Dbxref=NCBI_GP:TMR43540.1;Name=TMR43540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_10595;product=DNA alkylation repair protein;protein_id=TMR43540.1;transl_table=11 SOQE01000102.1 Genbank gene 7647 7946 . + . ID=gene-E3V84_10600;Name=E3V84_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10600 SOQE01000102.1 Protein Homology CDS 7647 7946 . + 0 ID=cds-TMR43525.1;Parent=gene-E3V84_10600;Dbxref=NCBI_GP:TMR43525.1;Name=TMR43525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445543.1;locus_tag=E3V84_10600;product=DUF4651 domain-containing protein;protein_id=TMR43525.1;transl_table=11 SOQE01000102.1 Genbank gene 7943 8260 . + . ID=gene-E3V84_10605;Name=E3V84_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10605 SOQE01000102.1 Protein Homology CDS 7943 8260 . + 0 ID=cds-TMR43526.1;Parent=gene-E3V84_10605;Dbxref=NCBI_GP:TMR43526.1;Name=TMR43526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359319.1;locus_tag=E3V84_10605;product=thioredoxin;protein_id=TMR43526.1;transl_table=11 SOQE01000102.1 Genbank gene 8276 8902 . + . ID=gene-E3V84_10610;Name=E3V84_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10610 SOQE01000102.1 Protein Homology CDS 8276 8902 . + 0 ID=cds-TMR43527.1;Parent=gene-E3V84_10610;Dbxref=NCBI_GP:TMR43527.1;Name=TMR43527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359318.1;locus_tag=E3V84_10610;product=DUF4479 domain-containing protein;protein_id=TMR43527.1;transl_table=11 SOQE01000102.1 Genbank gene 8944 9705 . + . ID=gene-E3V84_10615;Name=E3V84_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10615 SOQE01000102.1 Protein Homology CDS 8944 9705 . + 0 ID=cds-TMR43528.1;Parent=gene-E3V84_10615;Dbxref=NCBI_GP:TMR43528.1;Name=TMR43528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107790.1;locus_tag=E3V84_10615;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=TMR43528.1;transl_table=11 SOQE01000102.1 Genbank gene 9782 10177 . + . ID=gene-E3V84_10620;Name=E3V84_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10620 SOQE01000102.1 Protein Homology CDS 9782 10177 . + 0 ID=cds-TMR43529.1;Parent=gene-E3V84_10620;Dbxref=NCBI_GP:TMR43529.1;Name=TMR43529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359316.1;locus_tag=E3V84_10620;product=single-stranded DNA-binding protein;protein_id=TMR43529.1;transl_table=11 SOQE01000102.1 Genbank gene 10333 10617 . + . ID=gene-E3V84_10625;Name=E3V84_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10625 SOQE01000102.1 Protein Homology CDS 10333 10617 . + 0 ID=cds-TMR43530.1;Parent=gene-E3V84_10625;Dbxref=NCBI_GP:TMR43530.1;Name=TMR43530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359315.1;locus_tag=E3V84_10625;product=co-chaperone GroES;protein_id=TMR43530.1;transl_table=11 SOQE01000102.1 Genbank gene 10633 12255 . + . ID=gene-E3V84_10630;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=E3V84_10630 SOQE01000102.1 Protein Homology CDS 10633 12255 . + 0 ID=cds-TMR43531.1;Parent=gene-E3V84_10630;Dbxref=NCBI_GP:TMR43531.1;Name=TMR43531.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591590.1;locus_tag=E3V84_10630;product=chaperonin GroEL;protein_id=TMR43531.1;transl_table=11 SOQE01000102.1 Genbank gene 12393 13148 . + . ID=gene-E3V84_10635;Name=E3V84_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10635 SOQE01000102.1 Protein Homology CDS 12393 13148 . + 0 ID=cds-TMR43532.1;Parent=gene-E3V84_10635;Dbxref=NCBI_GP:TMR43532.1;Name=TMR43532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567550.1;locus_tag=E3V84_10635;product=epoxyqueuosine reductase QueH;protein_id=TMR43532.1;transl_table=11 SOQE01000102.1 Genbank gene 13594 14367 . + . ID=gene-E3V84_10640;Name=E3V84_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10640 SOQE01000102.1 Protein Homology CDS 13594 14367 . + 0 ID=cds-TMR43533.1;Parent=gene-E3V84_10640;Dbxref=NCBI_GP:TMR43533.1;Name=TMR43533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445624.1;locus_tag=E3V84_10640;product=class I SAM-dependent methyltransferase;protein_id=TMR43533.1;transl_table=11 SOQE01000102.1 Genbank gene 14380 15237 . + . ID=gene-E3V84_10645;Name=E3V84_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10645 SOQE01000102.1 Protein Homology CDS 14380 15237 . + 0 ID=cds-TMR43534.1;Parent=gene-E3V84_10645;Dbxref=NCBI_GP:TMR43534.1;Name=TMR43534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445625.1;locus_tag=E3V84_10645;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR43534.1;transl_table=11 SOQE01000102.1 Genbank gene 15430 15663 . + . ID=gene-E3V84_10650;Name=E3V84_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10650 SOQE01000102.1 Protein Homology CDS 15430 15663 . + 0 ID=cds-TMR43535.1;Parent=gene-E3V84_10650;Dbxref=NCBI_GP:TMR43535.1;Name=TMR43535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767835.1;locus_tag=E3V84_10650;product=hypothetical protein;protein_id=TMR43535.1;transl_table=11 SOQE01000102.1 Genbank gene 15584 16117 . - . ID=gene-E3V84_10655;Name=E3V84_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10655 SOQE01000102.1 Protein Homology CDS 15584 16117 . - 0 ID=cds-TMR43536.1;Parent=gene-E3V84_10655;Dbxref=NCBI_GP:TMR43536.1;Name=TMR43536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=E3V84_10655;product=DUF402 domain-containing protein;protein_id=TMR43536.1;transl_table=11 SOQE01000102.1 Genbank gene 16206 16982 . - . ID=gene-E3V84_10660;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=E3V84_10660 SOQE01000102.1 Protein Homology CDS 16206 16982 . - 0 ID=cds-TMR43537.1;Parent=gene-E3V84_10660;Dbxref=NCBI_GP:TMR43537.1;Name=TMR43537.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359310.2;locus_tag=E3V84_10660;product=recombination regulator RecX;protein_id=TMR43537.1;transl_table=11 SOQE01000102.1 Genbank gene 16992 17768 . - . ID=gene-E3V84_10665;Name=E3V84_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10665 SOQE01000102.1 Protein Homology CDS 16992 17768 . - 0 ID=cds-TMR43541.1;Parent=gene-E3V84_10665;Dbxref=NCBI_GP:TMR43541.1;Name=TMR43541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086342.1;locus_tag=E3V84_10665;product=aminoglycoside 3'-phosphotransferase;protein_id=TMR43541.1;transl_table=11 SOQE01000102.1 Genbank gene 17825 19180 . + . ID=gene-E3V84_10670;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=E3V84_10670 SOQE01000102.1 Protein Homology CDS 17825 19180 . + 0 ID=cds-TMR43538.1;Parent=gene-E3V84_10670;Dbxref=NCBI_GP:TMR43538.1;Name=TMR43538.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050288.1;locus_tag=E3V84_10670;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TMR43538.1;transl_table=11 ##sequence-region SOQE01000103.1 1 29778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000103.1 Genbank region 1 29778 . + . ID=SOQE01000103.1:1..29778;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000103.1 Genbank gene 1 264 . + . ID=gene-E3V84_10675;Name=E3V84_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10675;partial=true;start_range=.,1 SOQE01000103.1 Protein Homology CDS 1 264 . + 0 ID=cds-TMR43464.1;Parent=gene-E3V84_10675;Dbxref=NCBI_GP:TMR43464.1;Name=TMR43464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=E3V84_10675;partial=true;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR43464.1;start_range=.,1;transl_table=11 SOQE01000103.1 Genbank gene 558 1325 . - . ID=gene-E3V84_10680;Name=E3V84_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10680 SOQE01000103.1 Protein Homology CDS 558 1325 . - 0 ID=cds-TMR43465.1;Parent=gene-E3V84_10680;Dbxref=NCBI_GP:TMR43465.1;Name=TMR43465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000498766.1;locus_tag=E3V84_10680;product=hypothetical protein;protein_id=TMR43465.1;transl_table=11 SOQE01000103.1 Genbank gene 1342 2037 . - . ID=gene-E3V84_10685;Name=E3V84_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10685 SOQE01000103.1 Protein Homology CDS 1342 2037 . - 0 ID=cds-TMR43466.1;Parent=gene-E3V84_10685;Dbxref=NCBI_GP:TMR43466.1;Name=TMR43466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445697.1;locus_tag=E3V84_10685;product=ABC transporter ATP-binding protein;protein_id=TMR43466.1;transl_table=11 SOQE01000103.1 Genbank gene 2042 2407 . - . ID=gene-E3V84_10690;Name=E3V84_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10690 SOQE01000103.1 Protein Homology CDS 2042 2407 . - 0 ID=cds-TMR43467.1;Parent=gene-E3V84_10690;Dbxref=NCBI_GP:TMR43467.1;Name=TMR43467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445698.1;locus_tag=E3V84_10690;product=GntR family transcriptional regulator;protein_id=TMR43467.1;transl_table=11 SOQE01000103.1 Genbank gene 2547 3020 . + . ID=gene-E3V84_10695;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=E3V84_10695 SOQE01000103.1 Protein Homology CDS 2547 3020 . + 0 ID=cds-TMR43468.1;Parent=gene-E3V84_10695;Dbxref=NCBI_GP:TMR43468.1;Name=TMR43468.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359150.2;locus_tag=E3V84_10695;product=transcriptional repressor NrdR;protein_id=TMR43468.1;transl_table=11 SOQE01000103.1 Genbank gene 3021 4190 . + . ID=gene-E3V84_10700;Name=E3V84_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10700 SOQE01000103.1 Protein Homology CDS 3021 4190 . + 0 ID=cds-TMR43469.1;Parent=gene-E3V84_10700;Dbxref=NCBI_GP:TMR43469.1;Name=TMR43469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445700.1;locus_tag=E3V84_10700;product=DNA helicase;protein_id=TMR43469.1;transl_table=11 SOQE01000103.1 Genbank gene 4191 5087 . + . ID=gene-E3V84_10705;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=E3V84_10705 SOQE01000103.1 Protein Homology CDS 4191 5087 . + 0 ID=cds-TMR43470.1;Parent=gene-E3V84_10705;Dbxref=NCBI_GP:TMR43470.1;Name=TMR43470.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445701.1;locus_tag=E3V84_10705;product=primosomal protein DnaI;protein_id=TMR43470.1;transl_table=11 SOQE01000103.1 Genbank gene 5084 5797 . + . ID=gene-E3V84_10710;Name=E3V84_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10710 SOQE01000103.1 Protein Homology CDS 5084 5797 . + 0 ID=cds-TMR43471.1;Parent=gene-E3V84_10710;Dbxref=NCBI_GP:TMR43471.1;Name=TMR43471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445702.1;locus_tag=E3V84_10710;product=NADPH-dependent oxidoreductase;protein_id=TMR43471.1;transl_table=11 SOQE01000103.1 Genbank gene 5811 7121 . + . ID=gene-E3V84_10715;Name=E3V84_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10715 SOQE01000103.1 Protein Homology CDS 5811 7121 . + 0 ID=cds-TMR43472.1;Parent=gene-E3V84_10715;Dbxref=NCBI_GP:TMR43472.1;Name=TMR43472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=E3V84_10715;product=ribosome biogenesis GTPase Der;protein_id=TMR43472.1;transl_table=11 SOQE01000103.1 Genbank gene 7203 7538 . + . ID=gene-E3V84_10720;Name=E3V84_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10720 SOQE01000103.1 Protein Homology CDS 7203 7538 . + 0 ID=cds-TMR43473.1;Parent=gene-E3V84_10720;Dbxref=NCBI_GP:TMR43473.1;Name=TMR43473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445704.1;locus_tag=E3V84_10720;product=hypothetical protein;protein_id=TMR43473.1;transl_table=11 SOQE01000103.1 Genbank gene 7572 8363 . + . ID=gene-E3V84_10725;Name=E3V84_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10725 SOQE01000103.1 Protein Homology CDS 7572 8363 . + 0 ID=cds-TMR43474.1;Parent=gene-E3V84_10725;Dbxref=NCBI_GP:TMR43474.1;Name=TMR43474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359141.1;locus_tag=E3V84_10725;product=hypothetical protein;protein_id=TMR43474.1;transl_table=11 SOQE01000103.1 Genbank gene 8320 8997 . + . ID=gene-E3V84_10730;Name=E3V84_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10730 SOQE01000103.1 Protein Homology CDS 8320 8997 . + 0 ID=cds-TMR43475.1;Parent=gene-E3V84_10730;Dbxref=NCBI_GP:TMR43475.1;Name=TMR43475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359140.1;locus_tag=E3V84_10730;product=hypothetical protein;protein_id=TMR43475.1;transl_table=11 SOQE01000103.1 Genbank gene 9001 9651 . + . ID=gene-E3V84_10735;Name=E3V84_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10735 SOQE01000103.1 Protein Homology CDS 9001 9651 . + 0 ID=cds-TMR43476.1;Parent=gene-E3V84_10735;Dbxref=NCBI_GP:TMR43476.1;Name=TMR43476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359139.1;locus_tag=E3V84_10735;product=ABC transporter ATP-binding protein;protein_id=TMR43476.1;transl_table=11 SOQE01000103.1 Genbank gene 9662 9949 . + . ID=gene-E3V84_10740;Name=E3V84_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10740 SOQE01000103.1 Protein Homology CDS 9662 9949 . + 0 ID=cds-TMR43477.1;Parent=gene-E3V84_10740;Dbxref=NCBI_GP:TMR43477.1;Name=TMR43477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940707.1;locus_tag=E3V84_10740;product=hypothetical protein;protein_id=TMR43477.1;transl_table=11 SOQE01000103.1 Genbank gene 10095 12608 . + . ID=gene-E3V84_10745;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=E3V84_10745 SOQE01000103.1 Protein Homology CDS 10095 12608 . + 0 ID=cds-TMR43478.1;Parent=gene-E3V84_10745;Dbxref=NCBI_GP:TMR43478.1;Name=TMR43478.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359137.1;locus_tag=E3V84_10745;product=preprotein translocase subunit SecA;protein_id=TMR43478.1;transl_table=11 SOQE01000103.1 Genbank gene 12689 13720 . + . ID=gene-E3V84_10750;Name=E3V84_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10750 SOQE01000103.1 Protein Homology CDS 12689 13720 . + 0 ID=cds-TMR43479.1;Parent=gene-E3V84_10750;Dbxref=NCBI_GP:TMR43479.1;Name=TMR43479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359136.1;locus_tag=E3V84_10750;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TMR43479.1;transl_table=11 SOQE01000103.1 Genbank gene 13722 14753 . + . ID=gene-E3V84_10755;Name=E3V84_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10755 SOQE01000103.1 Protein Homology CDS 13722 14753 . + 0 ID=cds-TMR43480.1;Parent=gene-E3V84_10755;Dbxref=NCBI_GP:TMR43480.1;Name=TMR43480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359135.1;locus_tag=E3V84_10755;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TMR43480.1;transl_table=11 SOQE01000103.1 Genbank gene 14792 15160 . + . ID=gene-E3V84_10760;Name=E3V84_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10760 SOQE01000103.1 Protein Homology CDS 14792 15160 . + 0 ID=cds-TMR43481.1;Parent=gene-E3V84_10760;Dbxref=NCBI_GP:TMR43481.1;Name=TMR43481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445709.1;locus_tag=E3V84_10760;product=holo-ACP synthase;protein_id=TMR43481.1;transl_table=11 SOQE01000103.1 Genbank gene 15150 16253 . + . ID=gene-E3V84_10765;Name=E3V84_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10765 SOQE01000103.1 Protein Homology CDS 15150 16253 . + 0 ID=cds-TMR43482.1;Parent=gene-E3V84_10765;Dbxref=NCBI_GP:TMR43482.1;Name=TMR43482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648056.1;locus_tag=E3V84_10765;product=alanine racemase;protein_id=TMR43482.1;transl_table=11 SOQE01000103.1 Genbank gene 16272 18287 . + . ID=gene-E3V84_10770;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=E3V84_10770 SOQE01000103.1 Protein Homology CDS 16272 18287 . + 0 ID=cds-TMR43483.1;Parent=gene-E3V84_10770;Dbxref=NCBI_GP:TMR43483.1;Name=TMR43483.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359132.1;locus_tag=E3V84_10770;product=ATP-dependent DNA helicase RecG;protein_id=TMR43483.1;transl_table=11 SOQE01000103.1 Genbank gene 18324 18431 . + . ID=gene-E3V84_10775;Name=E3V84_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10775 SOQE01000103.1 Protein Homology CDS 18324 18431 . + 0 ID=cds-TMR43484.1;Parent=gene-E3V84_10775;Dbxref=NCBI_GP:TMR43484.1;Name=TMR43484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809715.1;locus_tag=E3V84_10775;product=alanine racemase;protein_id=TMR43484.1;transl_table=11 SOQE01000103.1 Genbank gene 18607 19587 . + . ID=gene-E3V84_10780;Name=E3V84_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10780 SOQE01000103.1 Protein Homology CDS 18607 19587 . + 0 ID=cds-TMR43485.1;Parent=gene-E3V84_10780;Dbxref=NCBI_GP:TMR43485.1;Name=TMR43485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359131.1;locus_tag=E3V84_10780;product=acetylxylan esterase;protein_id=TMR43485.1;transl_table=11 SOQE01000103.1 Genbank gene 19804 20160 . - . ID=gene-E3V84_10785;Name=E3V84_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10785 SOQE01000103.1 GeneMarkS-2+ CDS 19804 20160 . - 0 ID=cds-TMR43486.1;Parent=gene-E3V84_10785;Dbxref=NCBI_GP:TMR43486.1;Name=TMR43486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_10785;product=hypothetical protein;protein_id=TMR43486.1;transl_table=11 SOQE01000103.1 Genbank gene 20109 20288 . - . ID=gene-E3V84_10790;Name=E3V84_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10790 SOQE01000103.1 Protein Homology CDS 20109 20288 . - 0 ID=cds-TMR43487.1;Parent=gene-E3V84_10790;Dbxref=NCBI_GP:TMR43487.1;Name=TMR43487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=E3V84_10790;product=hypothetical protein;protein_id=TMR43487.1;transl_table=11 SOQE01000103.1 Genbank gene 20650 20877 . + . ID=gene-E3V84_10795;Name=E3V84_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10795 SOQE01000103.1 Protein Homology CDS 20650 20877 . + 0 ID=cds-TMR43488.1;Parent=gene-E3V84_10795;Dbxref=NCBI_GP:TMR43488.1;Name=TMR43488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359130.1;locus_tag=E3V84_10795;product=hypothetical protein;protein_id=TMR43488.1;transl_table=11 SOQE01000103.1 Genbank gene 21166 24603 . + . ID=gene-E3V84_10800;Name=E3V84_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10800 SOQE01000103.1 Protein Homology CDS 21166 24603 . + 0 ID=cds-TMR43489.1;Parent=gene-E3V84_10800;Dbxref=NCBI_GP:TMR43489.1;Name=TMR43489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012636588.1;locus_tag=E3V84_10800;product=YSIRK-type signal peptide-containing protein;protein_id=TMR43489.1;transl_table=11 SOQE01000103.1 Genbank gene 25320 28931 . + . ID=gene-E3V84_10805;Name=E3V84_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10805 SOQE01000103.1 Protein Homology CDS 25320 28931 . + 0 ID=cds-TMR43490.1;Parent=gene-E3V84_10805;Dbxref=NCBI_GP:TMR43490.1;Name=TMR43490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284821.1;locus_tag=E3V84_10805;product=trypsin-like serine protease;protein_id=TMR43490.1;transl_table=11 SOQE01000103.1 Genbank gene 29220 29627 . + . ID=gene-E3V84_10810;Name=E3V84_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10810 SOQE01000103.1 Protein Homology CDS 29220 29627 . + 0 ID=cds-TMR43491.1;Parent=gene-E3V84_10810;Dbxref=NCBI_GP:TMR43491.1;Name=TMR43491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357625.1;locus_tag=E3V84_10810;product=hypothetical protein;protein_id=TMR43491.1;transl_table=11 ##sequence-region SOQE01000104.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000104.1 Genbank region 1 966 . + . ID=SOQE01000104.1:1..966;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000104.1 Genbank gene 1 339 . + . ID=gene-E3V84_10815;Name=E3V84_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10815;partial=true;start_range=.,1 SOQE01000104.1 Protein Homology CDS 1 339 . + 0 ID=cds-TMR43400.1;Parent=gene-E3V84_10815;Dbxref=NCBI_GP:TMR43400.1;Name=TMR43400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_10815;partial=true;product=transposase;protein_id=TMR43400.1;start_range=.,1;transl_table=11 SOQE01000104.1 Genbank gene 529 714 . + . ID=gene-E3V84_10820;Name=E3V84_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10820 SOQE01000104.1 Protein Homology CDS 529 714 . + 0 ID=cds-TMR43401.1;Parent=gene-E3V84_10820;Dbxref=NCBI_GP:TMR43401.1;Name=TMR43401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V84_10820;product=hypothetical protein;protein_id=TMR43401.1;transl_table=11 SOQE01000104.1 Genbank gene 695 966 . + . ID=gene-E3V84_10825;Name=tnpB;end_range=966,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=E3V84_10825;partial=true SOQE01000104.1 Protein Homology CDS 695 966 . + 0 ID=cds-TMR43402.1;Parent=gene-E3V84_10825;Dbxref=NCBI_GP:TMR43402.1;Name=TMR43402.1;end_range=966,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_10825;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR43402.1;transl_table=11 ##sequence-region SOQE01000105.1 1 13805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000105.1 Genbank region 1 13805 . + . ID=SOQE01000105.1:1..13805;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000105.1 Genbank pseudogene 18 134 . + . ID=gene-E3V84_10830;Name=E3V84_10830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10830;pseudo=true SOQE01000105.1 Protein Homology CDS 18 134 . + 0 ID=cds-E3V84_10830;Parent=gene-E3V84_10830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_10830;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000105.1 Genbank gene 403 702 . - . ID=gene-E3V84_10835;Name=E3V84_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10835 SOQE01000105.1 Protein Homology CDS 403 702 . - 0 ID=cds-TMR43386.1;Parent=gene-E3V84_10835;Dbxref=NCBI_GP:TMR43386.1;Name=TMR43386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358314.1;locus_tag=E3V84_10835;product=DUF1827 family protein;protein_id=TMR43386.1;transl_table=11 SOQE01000105.1 Genbank gene 913 1365 . - . ID=gene-E3V84_10840;Name=E3V84_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10840 SOQE01000105.1 Protein Homology CDS 913 1365 . - 0 ID=cds-TMR43387.1;Parent=gene-E3V84_10840;Dbxref=NCBI_GP:TMR43387.1;Name=TMR43387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445980.1;locus_tag=E3V84_10840;product=NUDIX domain-containing protein;protein_id=TMR43387.1;transl_table=11 SOQE01000105.1 Genbank gene 1494 3752 . - . ID=gene-E3V84_10845;Name=E3V84_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10845 SOQE01000105.1 Protein Homology CDS 1494 3752 . - 0 ID=cds-TMR43388.1;Parent=gene-E3V84_10845;Dbxref=NCBI_GP:TMR43388.1;Name=TMR43388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445981.1;locus_tag=E3V84_10845;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR43388.1;transl_table=11 SOQE01000105.1 Genbank gene 3982 4212 . - . ID=gene-E3V84_10850;Name=E3V84_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10850 SOQE01000105.1 Protein Homology CDS 3982 4212 . - 0 ID=cds-TMR43389.1;Parent=gene-E3V84_10850;Dbxref=NCBI_GP:TMR43389.1;Name=TMR43389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003105222.1;locus_tag=E3V84_10850;product=DUF1797 family protein;protein_id=TMR43389.1;transl_table=11 SOQE01000105.1 Genbank gene 4403 5086 . + . ID=gene-E3V84_10855;Name=E3V84_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10855 SOQE01000105.1 Protein Homology CDS 4403 5086 . + 0 ID=cds-TMR43390.1;Parent=gene-E3V84_10855;Dbxref=NCBI_GP:TMR43390.1;Name=TMR43390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445983.1;locus_tag=E3V84_10855;product=amino acid ABC transporter permease;protein_id=TMR43390.1;transl_table=11 SOQE01000105.1 Genbank gene 5086 5820 . + . ID=gene-E3V84_10860;Name=E3V84_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10860 SOQE01000105.1 Protein Homology CDS 5086 5820 . + 0 ID=cds-TMR43391.1;Parent=gene-E3V84_10860;Dbxref=NCBI_GP:TMR43391.1;Name=TMR43391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445984.1;locus_tag=E3V84_10860;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR43391.1;transl_table=11 SOQE01000105.1 Genbank gene 5911 6831 . + . ID=gene-E3V84_10865;Name=E3V84_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10865 SOQE01000105.1 Protein Homology CDS 5911 6831 . + 0 ID=cds-TMR43392.1;Parent=gene-E3V84_10865;Dbxref=NCBI_GP:TMR43392.1;Name=TMR43392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145884.1;locus_tag=E3V84_10865;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=TMR43392.1;transl_table=11 SOQE01000105.1 Genbank gene 6836 7609 . + . ID=gene-E3V84_10870;Name=E3V84_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10870 SOQE01000105.1 Protein Homology CDS 6836 7609 . + 0 ID=cds-TMR43393.1;Parent=gene-E3V84_10870;Dbxref=NCBI_GP:TMR43393.1;Name=TMR43393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673607.1;locus_tag=E3V84_10870;product=HAD family hydrolase;protein_id=TMR43393.1;transl_table=11 SOQE01000105.1 Genbank gene 7668 8507 . + . ID=gene-E3V84_10875;Name=E3V84_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10875 SOQE01000105.1 Protein Homology CDS 7668 8507 . + 0 ID=cds-TMR43394.1;Parent=gene-E3V84_10875;Dbxref=NCBI_GP:TMR43394.1;Name=TMR43394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863087.1;locus_tag=E3V84_10875;product=NAD(P)H-hydrate dehydratase;protein_id=TMR43394.1;transl_table=11 SOQE01000105.1 Genbank gene 8805 9488 . + . ID=gene-E3V84_10880;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=E3V84_10880 SOQE01000105.1 Protein Homology CDS 8805 9488 . + 0 ID=cds-TMR43395.1;Parent=gene-E3V84_10880;Dbxref=NCBI_GP:TMR43395.1;Name=TMR43395.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429289.1;locus_tag=E3V84_10880;product=ribose-5-phosphate isomerase RpiA;protein_id=TMR43395.1;transl_table=11 SOQE01000105.1 Genbank gene 9502 10713 . + . ID=gene-E3V84_10885;Name=E3V84_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10885 SOQE01000105.1 Protein Homology CDS 9502 10713 . + 0 ID=cds-TMR43396.1;Parent=gene-E3V84_10885;Dbxref=NCBI_GP:TMR43396.1;Name=TMR43396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445990.1;locus_tag=E3V84_10885;product=phosphopentomutase;protein_id=TMR43396.1;transl_table=11 SOQE01000105.1 Genbank gene 10715 11275 . + . ID=gene-E3V84_10890;Name=E3V84_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10890 SOQE01000105.1 Protein Homology CDS 10715 11275 . + 0 ID=cds-TMR43397.1;Parent=gene-E3V84_10890;Dbxref=NCBI_GP:TMR43397.1;Name=TMR43397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445991.1;locus_tag=E3V84_10890;product=DUF1697 domain-containing protein;protein_id=TMR43397.1;transl_table=11 SOQE01000105.1 Genbank gene 11272 12081 . + . ID=gene-E3V84_10895;Name=E3V84_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10895 SOQE01000105.1 Protein Homology CDS 11272 12081 . + 0 ID=cds-TMR43398.1;Parent=gene-E3V84_10895;Dbxref=NCBI_GP:TMR43398.1;Name=TMR43398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358328.1;locus_tag=E3V84_10895;product=purine-nucleoside phosphorylase;protein_id=TMR43398.1;transl_table=11 SOQE01000105.1 Genbank gene 12305 12514 . + . ID=gene-E3V84_10900;Name=E3V84_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10900 SOQE01000105.1 Protein Homology CDS 12305 12514 . + 0 ID=cds-TMR43399.1;Parent=gene-E3V84_10900;Dbxref=NCBI_GP:TMR43399.1;Name=TMR43399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1;locus_tag=E3V84_10900;product=hypothetical protein;protein_id=TMR43399.1;transl_table=11 SOQE01000105.1 Genbank pseudogene 12537 13506 . + . ID=gene-E3V84_10905;Name=E3V84_10905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10905;pseudo=true SOQE01000105.1 Protein Homology CDS 12537 13506 . + 0 ID=cds-E3V84_10905;Parent=gene-E3V84_10905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690146.1;locus_tag=E3V84_10905;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000106.1 1 17652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000106.1 Genbank region 1 17652 . + . ID=SOQE01000106.1:1..17652;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000106.1 Genbank gene 1 395 . - . ID=gene-E3V84_10910;Name=E3V84_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10910;partial=true;start_range=.,1 SOQE01000106.1 Protein Homology CDS 1 395 . - 0 ID=cds-TMR43308.1;Parent=gene-E3V84_10910;Dbxref=NCBI_GP:TMR43308.1;Name=TMR43308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_10910;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR43308.1;start_range=.,1;transl_table=11 SOQE01000106.1 Genbank pseudogene 437 576 . - . ID=gene-E3V84_10915;Name=E3V84_10915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10915;pseudo=true SOQE01000106.1 Protein Homology CDS 437 576 . - 0 ID=cds-E3V84_10915;Parent=gene-E3V84_10915;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_10915;product=transposase;pseudo=true;transl_table=11 SOQE01000106.1 Genbank pseudogene 785 1505 . + . ID=gene-E3V84_10920;Name=E3V84_10920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10920;pseudo=true SOQE01000106.1 Protein Homology CDS 785 1505 . + 0 ID=cds-E3V84_10920;Parent=gene-E3V84_10920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=E3V84_10920;product=IS5 family transposase;pseudo=true;transl_table=11 SOQE01000106.1 Genbank gene 1651 2526 . - . ID=gene-E3V84_10925;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=E3V84_10925 SOQE01000106.1 Protein Homology CDS 1651 2526 . - 0 ID=cds-TMR43309.1;Parent=gene-E3V84_10925;Dbxref=NCBI_GP:TMR43309.1;Name=TMR43309.1;gbkey=CDS;gene=aguB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358417.1;locus_tag=E3V84_10925;product=N-carbamoylputrescine amidase;protein_id=TMR43309.1;transl_table=11 SOQE01000106.1 Genbank gene 2536 3621 . - . ID=gene-E3V84_10930;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=E3V84_10930 SOQE01000106.1 Protein Homology CDS 2536 3621 . - 0 ID=cds-TMR43310.1;Parent=gene-E3V84_10930;Dbxref=NCBI_GP:TMR43310.1;Name=TMR43310.1;gbkey=CDS;gene=aguA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358416.1;locus_tag=E3V84_10930;product=agmatine deiminase;protein_id=TMR43310.1;transl_table=11 SOQE01000106.1 Genbank gene 3618 4745 . - . ID=gene-E3V84_10935;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=E3V84_10935 SOQE01000106.1 Protein Homology CDS 3618 4745 . - 0 ID=cds-TMR43311.1;Parent=gene-E3V84_10935;Dbxref=NCBI_GP:TMR43311.1;Name=TMR43311.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358415.1;locus_tag=E3V84_10935;product=carboxynorspermidine decarboxylase;protein_id=TMR43311.1;transl_table=11 SOQE01000106.1 Genbank gene 4745 6004 . - . ID=gene-E3V84_10940;Name=E3V84_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10940 SOQE01000106.1 Protein Homology CDS 4745 6004 . - 0 ID=cds-TMR43312.1;Parent=gene-E3V84_10940;Dbxref=NCBI_GP:TMR43312.1;Name=TMR43312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358414.1;locus_tag=E3V84_10940;product=saccharopine dehydrogenase family protein;protein_id=TMR43312.1;transl_table=11 SOQE01000106.1 Genbank gene 6001 6861 . - . ID=gene-E3V84_10945;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=E3V84_10945 SOQE01000106.1 Protein Homology CDS 6001 6861 . - 0 ID=cds-TMR43313.1;Parent=gene-E3V84_10945;Dbxref=NCBI_GP:TMR43313.1;Name=TMR43313.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358413.1;locus_tag=E3V84_10945;product=polyamine aminopropyltransferase;protein_id=TMR43313.1;transl_table=11 SOQE01000106.1 Genbank gene 6862 8322 . - . ID=gene-E3V84_10950;Name=E3V84_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10950 SOQE01000106.1 Protein Homology CDS 6862 8322 . - 0 ID=cds-TMR43314.1;Parent=gene-E3V84_10950;Dbxref=NCBI_GP:TMR43314.1;Name=TMR43314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732143.1;locus_tag=E3V84_10950;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=TMR43314.1;transl_table=11 SOQE01000106.1 Genbank gene 9032 9727 . + . ID=gene-E3V84_10955;Name=E3V84_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10955 SOQE01000106.1 Protein Homology CDS 9032 9727 . + 0 ID=cds-TMR43315.1;Parent=gene-E3V84_10955;Dbxref=NCBI_GP:TMR43315.1;Name=TMR43315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446186.1;locus_tag=E3V84_10955;product=VIT family protein;protein_id=TMR43315.1;transl_table=11 SOQE01000106.1 Genbank gene 9756 10184 . - . ID=gene-E3V84_10960;Name=E3V84_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10960 SOQE01000106.1 Protein Homology CDS 9756 10184 . - 0 ID=cds-TMR43316.1;Parent=gene-E3V84_10960;Dbxref=NCBI_GP:TMR43316.1;Name=TMR43316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V84_10960;product=hypothetical protein;protein_id=TMR43316.1;transl_table=11 SOQE01000106.1 Genbank gene 10236 12224 . - . ID=gene-E3V84_10965;Name=E3V84_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10965 SOQE01000106.1 Protein Homology CDS 10236 12224 . - 0 ID=cds-TMR43317.1;Parent=gene-E3V84_10965;Dbxref=NCBI_GP:TMR43317.1;Name=TMR43317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358407.1;locus_tag=E3V84_10965;product=ABC transporter permease;protein_id=TMR43317.1;transl_table=11 SOQE01000106.1 Genbank gene 12226 12984 . - . ID=gene-E3V84_10970;Name=E3V84_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10970 SOQE01000106.1 Protein Homology CDS 12226 12984 . - 0 ID=cds-TMR43318.1;Parent=gene-E3V84_10970;Dbxref=NCBI_GP:TMR43318.1;Name=TMR43318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446188.1;locus_tag=E3V84_10970;product=ABC transporter ATP-binding protein;protein_id=TMR43318.1;transl_table=11 SOQE01000106.1 Genbank gene 13415 13612 . + . ID=gene-E3V84_10975;Name=E3V84_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10975 SOQE01000106.1 Protein Homology CDS 13415 13612 . + 0 ID=cds-TMR43319.1;Parent=gene-E3V84_10975;Dbxref=NCBI_GP:TMR43319.1;Name=TMR43319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680771.1;locus_tag=E3V84_10975;product=hypothetical protein;protein_id=TMR43319.1;transl_table=11 SOQE01000106.1 Genbank gene 13750 14052 . - . ID=gene-E3V84_10980;Name=E3V84_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10980 SOQE01000106.1 Protein Homology CDS 13750 14052 . - 0 ID=cds-TMR43320.1;Parent=gene-E3V84_10980;Dbxref=NCBI_GP:TMR43320.1;Name=TMR43320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358404.1;locus_tag=E3V84_10980;product=PspC domain-containing protein;protein_id=TMR43320.1;transl_table=11 SOQE01000106.1 Genbank gene 14081 14530 . - . ID=gene-E3V84_10985;Name=E3V84_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10985 SOQE01000106.1 Protein Homology CDS 14081 14530 . - 0 ID=cds-TMR43323.1;Parent=gene-E3V84_10985;Dbxref=NCBI_GP:TMR43323.1;Name=TMR43323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446192.1;locus_tag=E3V84_10985;product=SprT family protein;protein_id=TMR43323.1;transl_table=11 SOQE01000106.1 Genbank gene 14517 16646 . - . ID=gene-E3V84_10990;Name=E3V84_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10990 SOQE01000106.1 Protein Homology CDS 14517 16646 . - 0 ID=cds-TMR43321.1;Parent=gene-E3V84_10990;Dbxref=NCBI_GP:TMR43321.1;Name=TMR43321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446193.1;locus_tag=E3V84_10990;product=RNA-binding transcriptional accessory protein;protein_id=TMR43321.1;transl_table=11 SOQE01000106.1 Genbank pseudogene 16748 17226 . - . ID=gene-E3V84_10995;Name=E3V84_10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10995;pseudo=true SOQE01000106.1 Protein Homology CDS 16748 17226 . - 0 ID=cds-E3V84_10995;Parent=gene-E3V84_10995;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442116.1;locus_tag=E3V84_10995;product=DUF1919 domain-containing protein;pseudo=true;transl_table=11 SOQE01000106.1 Genbank pseudogene 17231 17323 . - . ID=gene-E3V84_11000;Name=E3V84_11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11000;pseudo=true SOQE01000106.1 Protein Homology CDS 17231 17323 . - 0 ID=cds-E3V84_11000;Parent=gene-E3V84_11000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856145.1;locus_tag=E3V84_11000;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 SOQE01000106.1 Genbank gene 17402 17652 . - . ID=gene-E3V84_11005;Name=E3V84_11005;end_range=17652,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11005;partial=true SOQE01000106.1 Protein Homology CDS 17402 17652 . - 2 ID=cds-TMR43322.1;Parent=gene-E3V84_11005;Dbxref=NCBI_GP:TMR43322.1;Name=TMR43322.1;end_range=17652,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_11005;partial=true;product=IS630 family transposase;protein_id=TMR43322.1;transl_table=11 ##sequence-region SOQE01000107.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000107.1 Genbank region 1 935 . + . ID=SOQE01000107.1:1..935;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000107.1 Genbank gene 1 935 . + . ID=gene-E3V84_11010;Name=E3V84_11010;end_range=935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11010;partial=true;start_range=.,1 SOQE01000107.1 Protein Homology CDS 1 935 . + 2 ID=cds-TMR43267.1;Parent=gene-E3V84_11010;Dbxref=NCBI_GP:TMR43267.1;Name=TMR43267.1;end_range=935,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V84_11010;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR43267.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000108.1 1 8056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000108.1 Genbank region 1 8056 . + . ID=SOQE01000108.1:1..8056;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000108.1 Genbank gene 55 127 . + . ID=gene-E3V84_11015;Name=E3V84_11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11015 SOQE01000108.1 tRNAscan-SE tRNA 55 127 . + . ID=rna-E3V84_11015;Parent=gene-E3V84_11015;anticodon=(pos:88..90);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11015;product=tRNA-Val SOQE01000108.1 tRNAscan-SE exon 55 127 . + . ID=exon-E3V84_11015-1;Parent=rna-E3V84_11015;anticodon=(pos:88..90);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11015;product=tRNA-Val SOQE01000108.1 Genbank gene 133 203 . + . ID=gene-E3V84_11020;Name=E3V84_11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11020 SOQE01000108.1 tRNAscan-SE tRNA 133 203 . + . ID=rna-E3V84_11020;Parent=gene-E3V84_11020;anticodon=(pos:165..167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11020;product=tRNA-Gly SOQE01000108.1 tRNAscan-SE exon 133 203 . + . ID=exon-E3V84_11020-1;Parent=rna-E3V84_11020;anticodon=(pos:165..167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11020;product=tRNA-Gly SOQE01000108.1 Genbank gene 238 311 . + . ID=gene-E3V84_11025;Name=E3V84_11025;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11025 SOQE01000108.1 tRNAscan-SE tRNA 238 311 . + . ID=rna-E3V84_11025;Parent=gene-E3V84_11025;anticodon=(pos:272..274);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11025;product=tRNA-Ile SOQE01000108.1 tRNAscan-SE exon 238 311 . + . ID=exon-E3V84_11025-1;Parent=rna-E3V84_11025;anticodon=(pos:272..274);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11025;product=tRNA-Ile SOQE01000108.1 Genbank gene 394 483 . + . ID=gene-E3V84_11030;Name=E3V84_11030;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11030 SOQE01000108.1 tRNAscan-SE tRNA 394 483 . + . ID=rna-E3V84_11030;Parent=gene-E3V84_11030;anticodon=(pos:430..432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11030;product=tRNA-Ser SOQE01000108.1 tRNAscan-SE exon 394 483 . + . ID=exon-E3V84_11030-1;Parent=rna-E3V84_11030;anticodon=(pos:430..432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11030;product=tRNA-Ser SOQE01000108.1 Genbank gene 494 567 . + . ID=gene-E3V84_11035;Name=E3V84_11035;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11035 SOQE01000108.1 tRNAscan-SE tRNA 494 567 . + . ID=rna-E3V84_11035;Parent=gene-E3V84_11035;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11035;product=tRNA-Met SOQE01000108.1 tRNAscan-SE exon 494 567 . + . ID=exon-E3V84_11035-1;Parent=rna-E3V84_11035;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11035;product=tRNA-Met SOQE01000108.1 Genbank gene 571 643 . + . ID=gene-E3V84_11040;Name=E3V84_11040;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11040 SOQE01000108.1 tRNAscan-SE tRNA 571 643 . + . ID=rna-E3V84_11040;Parent=gene-E3V84_11040;anticodon=(pos:604..606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11040;product=tRNA-Phe SOQE01000108.1 tRNAscan-SE exon 571 643 . + . ID=exon-E3V84_11040-1;Parent=rna-E3V84_11040;anticodon=(pos:604..606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11040;product=tRNA-Phe SOQE01000108.1 Genbank gene 656 736 . + . ID=gene-E3V84_11045;Name=E3V84_11045;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11045 SOQE01000108.1 tRNAscan-SE tRNA 656 736 . + . ID=rna-E3V84_11045;Parent=gene-E3V84_11045;anticodon=(pos:690..692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11045;product=tRNA-Tyr SOQE01000108.1 tRNAscan-SE exon 656 736 . + . ID=exon-E3V84_11045-1;Parent=rna-E3V84_11045;anticodon=(pos:690..692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11045;product=tRNA-Tyr SOQE01000108.1 Genbank gene 741 811 . + . ID=gene-E3V84_11050;Name=E3V84_11050;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11050 SOQE01000108.1 tRNAscan-SE tRNA 741 811 . + . ID=rna-E3V84_11050;Parent=gene-E3V84_11050;anticodon=(pos:773..775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11050;product=tRNA-Trp SOQE01000108.1 tRNAscan-SE exon 741 811 . + . ID=exon-E3V84_11050-1;Parent=rna-E3V84_11050;anticodon=(pos:773..775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11050;product=tRNA-Trp SOQE01000108.1 Genbank gene 826 898 . + . ID=gene-E3V84_11055;Name=E3V84_11055;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11055 SOQE01000108.1 tRNAscan-SE tRNA 826 898 . + . ID=rna-E3V84_11055;Parent=gene-E3V84_11055;anticodon=(pos:859..861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11055;product=tRNA-His SOQE01000108.1 tRNAscan-SE exon 826 898 . + . ID=exon-E3V84_11055-1;Parent=rna-E3V84_11055;anticodon=(pos:859..861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11055;product=tRNA-His SOQE01000108.1 Genbank gene 912 983 . + . ID=gene-E3V84_11060;Name=E3V84_11060;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11060 SOQE01000108.1 tRNAscan-SE tRNA 912 983 . + . ID=rna-E3V84_11060;Parent=gene-E3V84_11060;anticodon=(pos:944..946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11060;product=tRNA-Gln SOQE01000108.1 tRNAscan-SE exon 912 983 . + . ID=exon-E3V84_11060-1;Parent=rna-E3V84_11060;anticodon=(pos:944..946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11060;product=tRNA-Gln SOQE01000108.1 Genbank gene 993 1076 . + . ID=gene-E3V84_11065;Name=E3V84_11065;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11065 SOQE01000108.1 tRNAscan-SE tRNA 993 1076 . + . ID=rna-E3V84_11065;Parent=gene-E3V84_11065;anticodon=(pos:1027..1029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11065;product=tRNA-Leu SOQE01000108.1 tRNAscan-SE exon 993 1076 . + . ID=exon-E3V84_11065-1;Parent=rna-E3V84_11065;anticodon=(pos:1027..1029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11065;product=tRNA-Leu SOQE01000108.1 Genbank gene 1184 2461 . + . ID=gene-E3V84_11070;Name=E3V84_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11070 SOQE01000108.1 Protein Homology CDS 1184 2461 . + 0 ID=cds-TMR43260.1;Parent=gene-E3V84_11070;Dbxref=NCBI_GP:TMR43260.1;Name=TMR43260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359470.1;locus_tag=E3V84_11070;product=gamma-glutamylcysteine synthetase;protein_id=TMR43260.1;transl_table=11 SOQE01000108.1 Genbank gene 2538 4022 . + . ID=gene-E3V84_11075;Name=E3V84_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11075 SOQE01000108.1 Protein Homology CDS 2538 4022 . + 0 ID=cds-TMR43261.1;Parent=gene-E3V84_11075;Dbxref=NCBI_GP:TMR43261.1;Name=TMR43261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445346.1;locus_tag=E3V84_11075;product=threonine synthase;protein_id=TMR43261.1;transl_table=11 SOQE01000108.1 Genbank gene 4083 5363 . + . ID=gene-E3V84_11080;Name=E3V84_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11080 SOQE01000108.1 Protein Homology CDS 4083 5363 . + 0 ID=cds-TMR43262.1;Parent=gene-E3V84_11080;Dbxref=NCBI_GP:TMR43262.1;Name=TMR43262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445347.1;locus_tag=E3V84_11080;product=MATE family efflux transporter;protein_id=TMR43262.1;transl_table=11 SOQE01000108.1 Genbank gene 5367 5993 . + . ID=gene-E3V84_11085;Name=E3V84_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11085 SOQE01000108.1 Protein Homology CDS 5367 5993 . + 0 ID=cds-TMR43263.1;Parent=gene-E3V84_11085;Dbxref=NCBI_GP:TMR43263.1;Name=TMR43263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172841.1;locus_tag=E3V84_11085;product=HAD family hydrolase;protein_id=TMR43263.1;transl_table=11 SOQE01000108.1 Genbank gene 6153 7331 . + . ID=gene-E3V84_11090;Name=E3V84_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11090 SOQE01000108.1 Protein Homology CDS 6153 7331 . + 0 ID=cds-TMR43264.1;Parent=gene-E3V84_11090;Dbxref=NCBI_GP:TMR43264.1;Name=TMR43264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359466.1;locus_tag=E3V84_11090;product=LysM peptidoglycan-binding domain-containing protein;protein_id=TMR43264.1;transl_table=11 SOQE01000108.1 Genbank gene 7485 7679 . + . ID=gene-E3V84_11095;Name=E3V84_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11095 SOQE01000108.1 Protein Homology CDS 7485 7679 . + 0 ID=cds-TMR43265.1;Parent=gene-E3V84_11095;Dbxref=NCBI_GP:TMR43265.1;Name=TMR43265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828414.1;locus_tag=E3V84_11095;product=hypothetical protein;protein_id=TMR43265.1;transl_table=11 SOQE01000108.1 Genbank gene 7604 8056 . - . ID=gene-E3V84_11100;Name=E3V84_11100;end_range=8056,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11100;partial=true SOQE01000108.1 Protein Homology CDS 7604 8056 . - 0 ID=cds-TMR43266.1;Parent=gene-E3V84_11100;Dbxref=NCBI_GP:TMR43266.1;Name=TMR43266.1;end_range=8056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_11100;partial=true;product=IS630 family transposase;protein_id=TMR43266.1;transl_table=11 ##sequence-region SOQE01000109.1 1 1188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000109.1 Genbank region 1 1188 . + . ID=SOQE01000109.1:1..1188;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000109.1 Genbank gene 125 325 . - . ID=gene-E3V84_11105;Name=E3V84_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11105 SOQE01000109.1 Protein Homology CDS 125 325 . - 0 ID=cds-TMR43254.1;Parent=gene-E3V84_11105;Dbxref=NCBI_GP:TMR43254.1;Name=TMR43254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447110.1;locus_tag=E3V84_11105;product=transcriptional regulator;protein_id=TMR43254.1;transl_table=11 SOQE01000109.1 Genbank gene 530 985 . + . ID=gene-E3V84_11110;Name=E3V84_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11110 SOQE01000109.1 Protein Homology CDS 530 985 . + 0 ID=cds-TMR43255.1;Parent=gene-E3V84_11110;Dbxref=NCBI_GP:TMR43255.1;Name=TMR43255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080839.1;locus_tag=E3V84_11110;product=XRE family transcriptional regulator;protein_id=TMR43255.1;transl_table=11 SOQE01000109.1 Genbank pseudogene 955 1141 . - . ID=gene-E3V84_11115;Name=E3V84_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11115;pseudo=true SOQE01000109.1 Protein Homology CDS 955 1141 . - 0 ID=cds-E3V84_11115;Parent=gene-E3V84_11115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243484.1;locus_tag=E3V84_11115;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000011.1 1 567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000011.1 Genbank region 1 567 . + . ID=SOQE01000011.1:1..567;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000011.1 Genbank pseudogene 117 567 . - . ID=gene-E3V84_01450;Name=E3V84_01450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01450;pseudo=true SOQE01000011.1 Protein Homology CDS 117 567 . - 1 ID=cds-E3V84_01450;Parent=gene-E3V84_01450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514209.1;locus_tag=E3V84_01450;product=transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000110.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000110.1 Genbank region 1 536 . + . ID=SOQE01000110.1:1..536;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000110.1 Genbank pseudogene 168 536 . - . ID=gene-E3V84_11120;Name=E3V84_11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11120;pseudo=true SOQE01000110.1 Protein Homology CDS 168 536 . - 0 ID=cds-E3V84_11120;Parent=gene-E3V84_11120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=E3V84_11120;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000111.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000111.1 Genbank region 1 504 . + . ID=SOQE01000111.1:1..504;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000111.1 Genbank gene 118 420 . + . ID=gene-E3V84_11125;Name=E3V84_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11125 SOQE01000111.1 Protein Homology CDS 118 420 . + 0 ID=cds-TMR43136.1;Parent=gene-E3V84_11125;Dbxref=NCBI_GP:TMR43136.1;Name=TMR43136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040350.1;locus_tag=E3V84_11125;product=maturase;protein_id=TMR43136.1;transl_table=11 SOQE01000111.1 Genbank pseudogene 386 504 . + . ID=gene-E3V84_11130;Name=E3V84_11130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11130;pseudo=true SOQE01000111.1 Protein Homology CDS 386 504 . + 0 ID=cds-E3V84_11130;Parent=gene-E3V84_11130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816617.1;locus_tag=E3V84_11130;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region SOQE01000112.1 1 96401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000112.1 Genbank region 1 96401 . + . ID=SOQE01000112.1:1..96401;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000112.1 Genbank pseudogene 66 320 . + . ID=gene-E3V84_11135;Name=E3V84_11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11135;pseudo=true SOQE01000112.1 Protein Homology CDS 66 320 . + 0 ID=cds-E3V84_11135;Parent=gene-E3V84_11135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V84_11135;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 585 1349 . - . ID=gene-E3V84_11140;Name=E3V84_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11140 SOQE01000112.1 Protein Homology CDS 585 1349 . - 0 ID=cds-TMR43018.1;Parent=gene-E3V84_11140;Dbxref=NCBI_GP:TMR43018.1;Name=TMR43018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863667.1;locus_tag=E3V84_11140;product=ABC transporter permease;protein_id=TMR43018.1;transl_table=11 SOQE01000112.1 Genbank gene 1342 2112 . - . ID=gene-E3V84_11145;Name=E3V84_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11145 SOQE01000112.1 Protein Homology CDS 1342 2112 . - 0 ID=cds-TMR43019.1;Parent=gene-E3V84_11145;Dbxref=NCBI_GP:TMR43019.1;Name=TMR43019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966490.1;locus_tag=E3V84_11145;product=ABC transporter ATP-binding protein;protein_id=TMR43019.1;transl_table=11 SOQE01000112.1 Genbank gene 2082 3194 . - . ID=gene-E3V84_11150;Name=E3V84_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11150 SOQE01000112.1 Protein Homology CDS 2082 3194 . - 0 ID=cds-TMR43020.1;Parent=gene-E3V84_11150;Dbxref=NCBI_GP:TMR43020.1;Name=TMR43020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399294.1;locus_tag=E3V84_11150;product=ThiF family adenylyltransferase;protein_id=TMR43020.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 3462 4126 . + . ID=gene-E3V84_11155;Name=E3V84_11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11155;pseudo=true SOQE01000112.1 Protein Homology CDS 3462 4126 . + 0 ID=cds-E3V84_11155;Parent=gene-E3V84_11155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433071.1;locus_tag=E3V84_11155;product=transcriptional regulator;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 4187 5983 . - . ID=gene-E3V84_11160;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=E3V84_11160 SOQE01000112.1 Protein Homology CDS 4187 5983 . - 0 ID=cds-TMR43021.1;Parent=gene-E3V84_11160;Dbxref=NCBI_GP:TMR43021.1;Name=TMR43021.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359198.1;locus_tag=E3V84_11160;product=oligoendopeptidase F;protein_id=TMR43021.1;transl_table=11 SOQE01000112.1 Genbank gene 5994 6737 . - . ID=gene-E3V84_11165;Name=E3V84_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11165 SOQE01000112.1 Protein Homology CDS 5994 6737 . - 0 ID=cds-TMR43022.1;Parent=gene-E3V84_11165;Dbxref=NCBI_GP:TMR43022.1;Name=TMR43022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445681.1;locus_tag=E3V84_11165;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TMR43022.1;transl_table=11 SOQE01000112.1 Genbank gene 6739 7689 . - . ID=gene-E3V84_11170;Name=E3V84_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11170 SOQE01000112.1 Protein Homology CDS 6739 7689 . - 0 ID=cds-TMR43023.1;Parent=gene-E3V84_11170;Dbxref=NCBI_GP:TMR43023.1;Name=TMR43023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359200.2;locus_tag=E3V84_11170;product=50S ribosomal protein L11 methyltransferase;protein_id=TMR43023.1;transl_table=11 SOQE01000112.1 Genbank gene 7827 8255 . - . ID=gene-E3V84_11175;Name=E3V84_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11175 SOQE01000112.1 Protein Homology CDS 7827 8255 . - 0 ID=cds-TMR43024.1;Parent=gene-E3V84_11175;Dbxref=NCBI_GP:TMR43024.1;Name=TMR43024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359201.1;locus_tag=E3V84_11175;product=NUDIX domain-containing protein;protein_id=TMR43024.1;transl_table=11 SOQE01000112.1 Genbank gene 8236 9339 . - . ID=gene-E3V84_11180;Name=E3V84_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11180 SOQE01000112.1 Protein Homology CDS 8236 9339 . - 0 ID=cds-TMR43025.1;Parent=gene-E3V84_11180;Dbxref=NCBI_GP:TMR43025.1;Name=TMR43025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359202.1;locus_tag=E3V84_11180;product=RIP metalloprotease;protein_id=TMR43025.1;transl_table=11 SOQE01000112.1 Genbank gene 9343 9813 . - . ID=gene-E3V84_11185;Name=E3V84_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11185 SOQE01000112.1 Protein Homology CDS 9343 9813 . - 0 ID=cds-TMR43026.1;Parent=gene-E3V84_11185;Dbxref=NCBI_GP:TMR43026.1;Name=TMR43026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359203.1;locus_tag=E3V84_11185;product=DUF3013 family protein;protein_id=TMR43026.1;transl_table=11 SOQE01000112.1 Genbank gene 10104 10556 . - . ID=gene-E3V84_11190;Name=E3V84_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11190 SOQE01000112.1 Protein Homology CDS 10104 10556 . - 0 ID=cds-TMR43027.1;Parent=gene-E3V84_11190;Dbxref=NCBI_GP:TMR43027.1;Name=TMR43027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359204.1;locus_tag=E3V84_11190;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=TMR43027.1;transl_table=11 SOQE01000112.1 Genbank gene 10593 10799 . - . ID=gene-E3V84_11195;Name=E3V84_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11195 SOQE01000112.1 Protein Homology CDS 10593 10799 . - 0 ID=cds-TMR43028.1;Parent=gene-E3V84_11195;Dbxref=NCBI_GP:TMR43028.1;Name=TMR43028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359205.1;locus_tag=E3V84_11195;product=type II toxin-antitoxin system HicA family toxin;protein_id=TMR43028.1;transl_table=11 SOQE01000112.1 Genbank gene 10908 11078 . - . ID=gene-E3V84_11200;Name=E3V84_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11200 SOQE01000112.1 Protein Homology CDS 10908 11078 . - 0 ID=cds-TMR43110.1;Parent=gene-E3V84_11200;Dbxref=NCBI_GP:TMR43110.1;Name=TMR43110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001840169.1;locus_tag=E3V84_11200;product=hypothetical protein;protein_id=TMR43110.1;transl_table=11 SOQE01000112.1 Genbank gene 11251 11466 . - . ID=gene-E3V84_11205;Name=E3V84_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11205 SOQE01000112.1 Protein Homology CDS 11251 11466 . - 0 ID=cds-TMR43111.1;Parent=gene-E3V84_11205;Dbxref=NCBI_GP:TMR43111.1;Name=TMR43111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860604.1;locus_tag=E3V84_11205;product=hypothetical protein;protein_id=TMR43111.1;transl_table=11 SOQE01000112.1 Genbank gene 11768 13039 . + . ID=gene-E3V84_11210;Name=E3V84_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11210 SOQE01000112.1 Protein Homology CDS 11768 13039 . + 0 ID=cds-TMR43029.1;Parent=gene-E3V84_11210;Dbxref=NCBI_GP:TMR43029.1;Name=TMR43029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359208.1;locus_tag=E3V84_11210;product=replication-associated recombination protein A;protein_id=TMR43029.1;transl_table=11 SOQE01000112.1 Genbank gene 13304 13376 . + . ID=gene-E3V84_11215;Name=E3V84_11215;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_11215 SOQE01000112.1 tRNAscan-SE tRNA 13304 13376 . + . ID=rna-E3V84_11215;Parent=gene-E3V84_11215;anticodon=(pos:13337..13339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11215;product=tRNA-Lys SOQE01000112.1 tRNAscan-SE exon 13304 13376 . + . ID=exon-E3V84_11215-1;Parent=rna-E3V84_11215;anticodon=(pos:13337..13339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_11215;product=tRNA-Lys SOQE01000112.1 Genbank gene 13584 14903 . - . ID=gene-E3V84_11220;Name=E3V84_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11220 SOQE01000112.1 Protein Homology CDS 13584 14903 . - 0 ID=cds-TMR43030.1;Parent=gene-E3V84_11220;Dbxref=NCBI_GP:TMR43030.1;Name=TMR43030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359209.1;locus_tag=E3V84_11220;product=glycoside hydrolase family 32 protein;protein_id=TMR43030.1;transl_table=11 SOQE01000112.1 Genbank gene 14913 16529 . - . ID=gene-E3V84_11225;Name=E3V84_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11225 SOQE01000112.1 Protein Homology CDS 14913 16529 . - 0 ID=cds-TMR43031.1;Parent=gene-E3V84_11225;Dbxref=NCBI_GP:TMR43031.1;Name=TMR43031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669747.1;locus_tag=E3V84_11225;product=extracellular solute-binding protein;protein_id=TMR43031.1;transl_table=11 SOQE01000112.1 Genbank gene 16558 17448 . - . ID=gene-E3V84_11230;Name=E3V84_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11230 SOQE01000112.1 Protein Homology CDS 16558 17448 . - 0 ID=cds-TMR43032.1;Parent=gene-E3V84_11230;Dbxref=NCBI_GP:TMR43032.1;Name=TMR43032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797960.1;locus_tag=E3V84_11230;product=carbohydrate ABC transporter permease;protein_id=TMR43032.1;transl_table=11 SOQE01000112.1 Genbank gene 17459 18376 . - . ID=gene-E3V84_11235;Name=E3V84_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11235 SOQE01000112.1 Protein Homology CDS 17459 18376 . - 0 ID=cds-TMR43033.1;Parent=gene-E3V84_11235;Dbxref=NCBI_GP:TMR43033.1;Name=TMR43033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084977.1;locus_tag=E3V84_11235;product=sugar ABC transporter permease;protein_id=TMR43033.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 18614 19532 . - . ID=gene-E3V84_11240;Name=E3V84_11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11240;pseudo=true SOQE01000112.1 Protein Homology CDS 18614 19532 . - 0 ID=cds-E3V84_11240;Parent=gene-E3V84_11240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838210.1;locus_tag=E3V84_11240;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 19713 20168 . - . ID=gene-E3V84_11245;Name=E3V84_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11245 SOQE01000112.1 Protein Homology CDS 19713 20168 . - 0 ID=cds-TMR43034.1;Parent=gene-E3V84_11245;Dbxref=NCBI_GP:TMR43034.1;Name=TMR43034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517327.1;locus_tag=E3V84_11245;product=GNAT family N-acetyltransferase;protein_id=TMR43034.1;transl_table=11 SOQE01000112.1 Genbank gene 20238 20897 . + . ID=gene-E3V84_11250;Name=E3V84_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11250 SOQE01000112.1 Protein Homology CDS 20238 20897 . + 0 ID=cds-TMR43035.1;Parent=gene-E3V84_11250;Dbxref=NCBI_GP:TMR43035.1;Name=TMR43035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359220.1;locus_tag=E3V84_11250;product=prepilin peptidase;protein_id=TMR43035.1;transl_table=11 SOQE01000112.1 Genbank gene 20949 22100 . - . ID=gene-E3V84_11255;Name=E3V84_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11255 SOQE01000112.1 Protein Homology CDS 20949 22100 . - 0 ID=cds-TMR43036.1;Parent=gene-E3V84_11255;Dbxref=NCBI_GP:TMR43036.1;Name=TMR43036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359221.1;locus_tag=E3V84_11255;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR43036.1;transl_table=11 SOQE01000112.1 Genbank gene 22115 22846 . - . ID=gene-E3V84_11260;Name=E3V84_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11260 SOQE01000112.1 Protein Homology CDS 22115 22846 . - 0 ID=cds-TMR43037.1;Parent=gene-E3V84_11260;Dbxref=NCBI_GP:TMR43037.1;Name=TMR43037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359222.1;locus_tag=E3V84_11260;product=hypothetical protein;protein_id=TMR43037.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 22967 23068 . + . ID=gene-E3V84_11265;Name=E3V84_11265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11265;pseudo=true SOQE01000112.1 Protein Homology CDS 22967 23068 . + 0 ID=cds-E3V84_11265;Parent=gene-E3V84_11265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359220.1;locus_tag=E3V84_11265;product=prepilin peptidase;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 23040 23816 . - . ID=gene-E3V84_11270;Name=E3V84_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11270 SOQE01000112.1 Protein Homology CDS 23040 23816 . - 0 ID=cds-TMR43038.1;Parent=gene-E3V84_11270;Dbxref=NCBI_GP:TMR43038.1;Name=TMR43038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359223.1;locus_tag=E3V84_11270;product=tryptophan synthase subunit alpha;protein_id=TMR43038.1;transl_table=11 SOQE01000112.1 Genbank gene 23809 25032 . - . ID=gene-E3V84_11275;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=E3V84_11275 SOQE01000112.1 Protein Homology CDS 23809 25032 . - 0 ID=cds-TMR43039.1;Parent=gene-E3V84_11275;Dbxref=NCBI_GP:TMR43039.1;Name=TMR43039.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445664.1;locus_tag=E3V84_11275;product=tryptophan synthase subunit beta;protein_id=TMR43039.1;transl_table=11 SOQE01000112.1 Genbank gene 25010 25639 . - . ID=gene-E3V84_11280;Name=E3V84_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11280 SOQE01000112.1 Protein Homology CDS 25010 25639 . - 0 ID=cds-TMR43040.1;Parent=gene-E3V84_11280;Dbxref=NCBI_GP:TMR43040.1;Name=TMR43040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359225.1;locus_tag=E3V84_11280;product=phosphoribosylanthranilate isomerase;protein_id=TMR43040.1;transl_table=11 SOQE01000112.1 Genbank gene 25596 26363 . - . ID=gene-E3V84_11285;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=E3V84_11285 SOQE01000112.1 Protein Homology CDS 25596 26363 . - 0 ID=cds-TMR43041.1;Parent=gene-E3V84_11285;Dbxref=NCBI_GP:TMR43041.1;Name=TMR43041.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359226.1;locus_tag=E3V84_11285;product=indole-3-glycerol phosphate synthase TrpC;protein_id=TMR43041.1;transl_table=11 SOQE01000112.1 Genbank gene 26360 27364 . - . ID=gene-E3V84_11290;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=E3V84_11290 SOQE01000112.1 Protein Homology CDS 26360 27364 . - 0 ID=cds-TMR43042.1;Parent=gene-E3V84_11290;Dbxref=NCBI_GP:TMR43042.1;Name=TMR43042.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359227.1;locus_tag=E3V84_11290;product=anthranilate phosphoribosyltransferase;protein_id=TMR43042.1;transl_table=11 SOQE01000112.1 Genbank gene 27375 27941 . - . ID=gene-E3V84_11295;Name=E3V84_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11295 SOQE01000112.1 Protein Homology CDS 27375 27941 . - 0 ID=cds-TMR43043.1;Parent=gene-E3V84_11295;Dbxref=NCBI_GP:TMR43043.1;Name=TMR43043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359228.1;locus_tag=E3V84_11295;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=TMR43043.1;transl_table=11 SOQE01000112.1 Genbank gene 27938 29299 . - . ID=gene-E3V84_11300;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=E3V84_11300 SOQE01000112.1 Protein Homology CDS 27938 29299 . - 0 ID=cds-TMR43044.1;Parent=gene-E3V84_11300;Dbxref=NCBI_GP:TMR43044.1;Name=TMR43044.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359229.2;locus_tag=E3V84_11300;product=anthranilate synthase component I;protein_id=TMR43044.1;transl_table=11 SOQE01000112.1 Genbank gene 29672 29866 . - . ID=gene-E3V84_11305;Name=E3V84_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11305 SOQE01000112.1 Protein Homology CDS 29672 29866 . - 0 ID=cds-TMR43045.1;Parent=gene-E3V84_11305;Dbxref=NCBI_GP:TMR43045.1;Name=TMR43045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694306.1;locus_tag=E3V84_11305;product=hypothetical protein;protein_id=TMR43045.1;transl_table=11 SOQE01000112.1 Genbank gene 30475 31476 . - . ID=gene-E3V84_11310;Name=E3V84_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11310 SOQE01000112.1 Protein Homology CDS 30475 31476 . - 0 ID=cds-TMR43046.1;Parent=gene-E3V84_11310;Dbxref=NCBI_GP:TMR43046.1;Name=TMR43046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359231.1;locus_tag=E3V84_11310;product=LacI family transcriptional regulator;protein_id=TMR43046.1;transl_table=11 SOQE01000112.1 Genbank gene 31584 31952 . - . ID=gene-E3V84_11315;Name=E3V84_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11315 SOQE01000112.1 Protein Homology CDS 31584 31952 . - 0 ID=cds-TMR43047.1;Parent=gene-E3V84_11315;Dbxref=NCBI_GP:TMR43047.1;Name=TMR43047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359232.1;locus_tag=E3V84_11315;product=hypothetical protein;protein_id=TMR43047.1;transl_table=11 SOQE01000112.1 Genbank gene 32048 32758 . - . ID=gene-E3V84_11320;Name=E3V84_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11320 SOQE01000112.1 Protein Homology CDS 32048 32758 . - 0 ID=cds-TMR43048.1;Parent=gene-E3V84_11320;Dbxref=NCBI_GP:TMR43048.1;Name=TMR43048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359233.1;locus_tag=E3V84_11320;product=MgtC/SapB family protein;protein_id=TMR43048.1;transl_table=11 SOQE01000112.1 Genbank gene 32761 34452 . - . ID=gene-E3V84_11325;Name=E3V84_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11325 SOQE01000112.1 Protein Homology CDS 32761 34452 . - 0 ID=cds-TMR43049.1;Parent=gene-E3V84_11325;Dbxref=NCBI_GP:TMR43049.1;Name=TMR43049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359235.1;locus_tag=E3V84_11325;product=iron ABC transporter permease;protein_id=TMR43049.1;transl_table=11 SOQE01000112.1 Genbank gene 34464 35474 . - . ID=gene-E3V84_11330;Name=E3V84_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11330 SOQE01000112.1 Protein Homology CDS 34464 35474 . - 0 ID=cds-TMR43050.1;Parent=gene-E3V84_11330;Dbxref=NCBI_GP:TMR43050.1;Name=TMR43050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359236.1;locus_tag=E3V84_11330;product=ABC transporter ATP-binding protein;protein_id=TMR43050.1;transl_table=11 SOQE01000112.1 Genbank gene 35578 36645 . - . ID=gene-E3V84_11335;Name=E3V84_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11335 SOQE01000112.1 Protein Homology CDS 35578 36645 . - 0 ID=cds-TMR43051.1;Parent=gene-E3V84_11335;Dbxref=NCBI_GP:TMR43051.1;Name=TMR43051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359237.1;locus_tag=E3V84_11335;product=extracellular solute-binding protein;protein_id=TMR43051.1;transl_table=11 SOQE01000112.1 Genbank gene 36670 37329 . - . ID=gene-E3V84_11340;Name=E3V84_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11340 SOQE01000112.1 Protein Homology CDS 36670 37329 . - 0 ID=cds-TMR43052.1;Parent=gene-E3V84_11340;Dbxref=NCBI_GP:TMR43052.1;Name=TMR43052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359238.1;locus_tag=E3V84_11340;product=DUF1868 domain-containing protein;protein_id=TMR43052.1;transl_table=11 SOQE01000112.1 Genbank gene 37509 38519 . - . ID=gene-E3V84_11345;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=E3V84_11345 SOQE01000112.1 Protein Homology CDS 37509 38519 . - 0 ID=cds-TMR43053.1;Parent=gene-E3V84_11345;Dbxref=NCBI_GP:TMR43053.1;Name=TMR43053.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996568.1;locus_tag=E3V84_11345;product=UDP-glucose 4-epimerase GalE;protein_id=TMR43053.1;transl_table=11 SOQE01000112.1 Genbank gene 38532 40007 . - . ID=gene-E3V84_11350;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=E3V84_11350 SOQE01000112.1 Protein Homology CDS 38532 40007 . - 0 ID=cds-TMR43054.1;Parent=gene-E3V84_11350;Dbxref=NCBI_GP:TMR43054.1;Name=TMR43054.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359240.1;locus_tag=E3V84_11350;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=TMR43054.1;transl_table=11 SOQE01000112.1 Genbank gene 40020 40661 . - . ID=gene-E3V84_11355;Name=E3V84_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11355 SOQE01000112.1 Protein Homology CDS 40020 40661 . - 0 ID=cds-TMR43055.1;Parent=gene-E3V84_11355;Dbxref=NCBI_GP:TMR43055.1;Name=TMR43055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359241.1;locus_tag=E3V84_11355;product=phosphate uptake regulator PhoU;protein_id=TMR43055.1;transl_table=11 SOQE01000112.1 Genbank gene 40719 41465 . - . ID=gene-E3V84_11360;Name=E3V84_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11360 SOQE01000112.1 Protein Homology CDS 40719 41465 . - 0 ID=cds-TMR43056.1;Parent=gene-E3V84_11360;Dbxref=NCBI_GP:TMR43056.1;Name=TMR43056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239016.1;locus_tag=E3V84_11360;product=protein phosphatase 2C family protein;protein_id=TMR43056.1;transl_table=11 SOQE01000112.1 Genbank gene 41449 43605 . - . ID=gene-E3V84_11365;Name=pfbA;gbkey=Gene;gene=pfbA;gene_biotype=protein_coding;locus_tag=E3V84_11365 SOQE01000112.1 Protein Homology CDS 41449 43605 . - 0 ID=cds-TMR43057.1;Parent=gene-E3V84_11365;Dbxref=NCBI_GP:TMR43057.1;Name=TMR43057.1;gbkey=CDS;gene=pfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398455.1;locus_tag=E3V84_11365;product=multi-ligand-binding adhesin PfbA;protein_id=TMR43057.1;transl_table=11 SOQE01000112.1 Genbank gene 43919 44149 . - . ID=gene-E3V84_11370;Name=E3V84_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11370 SOQE01000112.1 Protein Homology CDS 43919 44149 . - 0 ID=cds-TMR43058.1;Parent=gene-E3V84_11370;Dbxref=NCBI_GP:TMR43058.1;Name=TMR43058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280107.1;locus_tag=E3V84_11370;product=hypothetical protein;protein_id=TMR43058.1;transl_table=11 SOQE01000112.1 Genbank gene 44772 45998 . - . ID=gene-E3V84_11375;Name=E3V84_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11375 SOQE01000112.1 Protein Homology CDS 44772 45998 . - 0 ID=cds-TMR43059.1;Parent=gene-E3V84_11375;Dbxref=NCBI_GP:TMR43059.1;Name=TMR43059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445657.1;locus_tag=E3V84_11375;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=TMR43059.1;transl_table=11 SOQE01000112.1 Genbank gene 46041 46733 . - . ID=gene-E3V84_11380;Name=E3V84_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11380 SOQE01000112.1 Protein Homology CDS 46041 46733 . - 0 ID=cds-TMR43060.1;Parent=gene-E3V84_11380;Dbxref=NCBI_GP:TMR43060.1;Name=TMR43060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445656.1;locus_tag=E3V84_11380;product=sugar transferase;protein_id=TMR43060.1;transl_table=11 SOQE01000112.1 Genbank gene 46917 48659 . - . ID=gene-E3V84_11385;Name=E3V84_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11385 SOQE01000112.1 Protein Homology CDS 46917 48659 . - 0 ID=cds-TMR43061.1;Parent=gene-E3V84_11385;Dbxref=NCBI_GP:TMR43061.1;Name=TMR43061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359248.1;locus_tag=E3V84_11385;product=ABC transporter ATP-binding protein;protein_id=TMR43061.1;transl_table=11 SOQE01000112.1 Genbank gene 48649 50394 . - . ID=gene-E3V84_11390;Name=E3V84_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11390 SOQE01000112.1 Protein Homology CDS 48649 50394 . - 0 ID=cds-TMR43062.1;Parent=gene-E3V84_11390;Dbxref=NCBI_GP:TMR43062.1;Name=TMR43062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445654.1;locus_tag=E3V84_11390;product=ATP-binding cassette domain-containing protein;protein_id=TMR43062.1;transl_table=11 SOQE01000112.1 Genbank gene 50449 50928 . - . ID=gene-E3V84_11395;Name=E3V84_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11395 SOQE01000112.1 Protein Homology CDS 50449 50928 . - 0 ID=cds-TMR43063.1;Parent=gene-E3V84_11395;Dbxref=NCBI_GP:TMR43063.1;Name=TMR43063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284967.1;locus_tag=E3V84_11395;product=DUF421 domain-containing protein;protein_id=TMR43063.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 51077 51341 . - . ID=gene-E3V84_11400;Name=E3V84_11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11400;pseudo=true SOQE01000112.1 Protein Homology CDS 51077 51341 . - 0 ID=cds-E3V84_11400;Parent=gene-E3V84_11400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837066.1;locus_tag=E3V84_11400;product=DUF3290 family protein;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 51391 51528 . - . ID=gene-E3V84_11405;Name=E3V84_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11405 SOQE01000112.1 Protein Homology CDS 51391 51528 . - 0 ID=cds-TMR43064.1;Parent=gene-E3V84_11405;Dbxref=NCBI_GP:TMR43064.1;Name=TMR43064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850047.1;locus_tag=E3V84_11405;product=DUF3290 family protein;protein_id=TMR43064.1;transl_table=11 SOQE01000112.1 Genbank gene 51655 52296 . - . ID=gene-E3V84_11410;Name=E3V84_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11410 SOQE01000112.1 Protein Homology CDS 51655 52296 . - 0 ID=cds-TMR43065.1;Parent=gene-E3V84_11410;Dbxref=NCBI_GP:TMR43065.1;Name=TMR43065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445651.1;locus_tag=E3V84_11410;product=DUF1648 domain-containing protein;protein_id=TMR43065.1;transl_table=11 SOQE01000112.1 Genbank gene 52277 52564 . - . ID=gene-E3V84_11415;Name=E3V84_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11415 SOQE01000112.1 Protein Homology CDS 52277 52564 . - 0 ID=cds-TMR43066.1;Parent=gene-E3V84_11415;Dbxref=NCBI_GP:TMR43066.1;Name=TMR43066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445650.1;locus_tag=E3V84_11415;product=ArsR family transcriptional regulator;protein_id=TMR43066.1;transl_table=11 SOQE01000112.1 Genbank gene 52548 53447 . - . ID=gene-E3V84_11420;Name=E3V84_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11420 SOQE01000112.1 Protein Homology CDS 52548 53447 . - 0 ID=cds-TMR43067.1;Parent=gene-E3V84_11420;Dbxref=NCBI_GP:TMR43067.1;Name=TMR43067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445649.1;locus_tag=E3V84_11420;product=CPBP family intramembrane metalloprotease;protein_id=TMR43067.1;transl_table=11 SOQE01000112.1 Genbank gene 53667 54494 . + . ID=gene-E3V84_11425;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=E3V84_11425 SOQE01000112.1 Protein Homology CDS 53667 54494 . + 0 ID=cds-TMR43068.1;Parent=gene-E3V84_11425;Dbxref=NCBI_GP:TMR43068.1;Name=TMR43068.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445648.1;locus_tag=E3V84_11425;product=exodeoxyribonuclease III;protein_id=TMR43068.1;transl_table=11 SOQE01000112.1 Genbank gene 54506 54892 . + . ID=gene-E3V84_11430;Name=E3V84_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11430 SOQE01000112.1 Protein Homology CDS 54506 54892 . + 0 ID=cds-TMR43069.1;Parent=gene-E3V84_11430;Dbxref=NCBI_GP:TMR43069.1;Name=TMR43069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035640.1;locus_tag=E3V84_11430;product=VOC family protein;protein_id=TMR43069.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 54992 55066 . + . ID=gene-E3V84_11435;Name=E3V84_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11435;pseudo=true SOQE01000112.1 Protein Homology CDS 54992 55066 . + 0 ID=cds-E3V84_11435;Parent=gene-E3V84_11435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_11435;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000112.1 cmsearch riboswitch 55233 55328 . + . ID=id-SOQE01000112.1:55233..55328;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000112.1 Genbank gene 55452 56033 . + . ID=gene-E3V84_11440;Name=E3V84_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11440 SOQE01000112.1 Protein Homology CDS 55452 56033 . + 0 ID=cds-TMR43070.1;Parent=gene-E3V84_11440;Dbxref=NCBI_GP:TMR43070.1;Name=TMR43070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445646.1;locus_tag=E3V84_11440;product=xanthine phosphoribosyltransferase;protein_id=TMR43070.1;transl_table=11 SOQE01000112.1 Genbank gene 56033 57295 . + . ID=gene-E3V84_11445;Name=E3V84_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11445 SOQE01000112.1 Protein Homology CDS 56033 57295 . + 0 ID=cds-TMR43071.1;Parent=gene-E3V84_11445;Dbxref=NCBI_GP:TMR43071.1;Name=TMR43071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445645.1;locus_tag=E3V84_11445;product=purine permease;protein_id=TMR43071.1;transl_table=11 SOQE01000112.1 Genbank gene 57351 58841 . - . ID=gene-E3V84_11450;Name=E3V84_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11450 SOQE01000112.1 Protein Homology CDS 57351 58841 . - 0 ID=cds-TMR43072.1;Parent=gene-E3V84_11450;Dbxref=NCBI_GP:TMR43072.1;Name=TMR43072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003712295.1;locus_tag=E3V84_11450;product=DNA mismatch repair protein MutH;protein_id=TMR43072.1;transl_table=11 SOQE01000112.1 Genbank gene 58958 60223 . + . ID=gene-E3V84_11455;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=E3V84_11455 SOQE01000112.1 Protein Homology CDS 58958 60223 . + 0 ID=cds-TMR43073.1;Parent=gene-E3V84_11455;Dbxref=NCBI_GP:TMR43073.1;Name=TMR43073.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886006.1;locus_tag=E3V84_11455;product=DNA (cytosine-5-)-methyltransferase;protein_id=TMR43073.1;transl_table=11 SOQE01000112.1 Genbank gene 60287 60454 . - . ID=gene-E3V84_11460;Name=E3V84_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11460 SOQE01000112.1 Protein Homology CDS 60287 60454 . - 0 ID=cds-TMR43112.1;Parent=gene-E3V84_11460;Dbxref=NCBI_GP:TMR43112.1;Name=TMR43112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760983.1;locus_tag=E3V84_11460;product=protein dpnD;protein_id=TMR43112.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 60663 61425 . - . ID=gene-E3V84_11465;Name=E3V84_11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11465;pseudo=true SOQE01000112.1 Protein Homology CDS 60663 61425 . - 0 ID=cds-E3V84_11465;Parent=gene-E3V84_11465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359257.1;locus_tag=E3V84_11465;product=restriction endonuclease;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 62003 62194 . - . ID=gene-E3V84_11470;Name=E3V84_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11470 SOQE01000112.1 GeneMarkS-2+ CDS 62003 62194 . - 0 ID=cds-TMR43074.1;Parent=gene-E3V84_11470;Dbxref=NCBI_GP:TMR43074.1;Name=TMR43074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_11470;product=hypothetical protein;protein_id=TMR43074.1;transl_table=11 SOQE01000112.1 Genbank gene 62160 62510 . - . ID=gene-E3V84_11475;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=E3V84_11475 SOQE01000112.1 Protein Homology CDS 62160 62510 . - 0 ID=cds-TMR43075.1;Parent=gene-E3V84_11475;Dbxref=NCBI_GP:TMR43075.1;Name=TMR43075.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445520.1;locus_tag=E3V84_11475;product=30S ribosome-binding factor RbfA;protein_id=TMR43075.1;transl_table=11 SOQE01000112.1 Genbank gene 62761 65703 . - . ID=gene-E3V84_11480;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=E3V84_11480 SOQE01000112.1 Protein Homology CDS 62761 65703 . - 0 ID=cds-TMR43076.1;Parent=gene-E3V84_11480;Dbxref=NCBI_GP:TMR43076.1;Name=TMR43076.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445519.1;locus_tag=E3V84_11480;product=translation initiation factor IF-2;protein_id=TMR43076.1;transl_table=11 SOQE01000112.1 Genbank gene 65720 66019 . - . ID=gene-E3V84_11485;Name=E3V84_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11485 SOQE01000112.1 Protein Homology CDS 65720 66019 . - 0 ID=cds-TMR43077.1;Parent=gene-E3V84_11485;Dbxref=NCBI_GP:TMR43077.1;Name=TMR43077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358074.1;locus_tag=E3V84_11485;product=YlxQ-related RNA-binding protein;protein_id=TMR43077.1;transl_table=11 SOQE01000112.1 Genbank gene 66012 66305 . - . ID=gene-E3V84_11490;Name=E3V84_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11490 SOQE01000112.1 Protein Homology CDS 66012 66305 . - 0 ID=cds-TMR43078.1;Parent=gene-E3V84_11490;Dbxref=NCBI_GP:TMR43078.1;Name=TMR43078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358073.1;locus_tag=E3V84_11490;product=YlxR family protein;protein_id=TMR43078.1;transl_table=11 SOQE01000112.1 Genbank gene 66327 67463 . - . ID=gene-E3V84_11495;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=E3V84_11495 SOQE01000112.1 Protein Homology CDS 66327 67463 . - 0 ID=cds-TMR43079.1;Parent=gene-E3V84_11495;Dbxref=NCBI_GP:TMR43079.1;Name=TMR43079.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358072.1;locus_tag=E3V84_11495;product=transcription termination/antitermination protein NusA;protein_id=TMR43079.1;transl_table=11 SOQE01000112.1 Genbank gene 67507 67986 . - . ID=gene-E3V84_11500;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=E3V84_11500 SOQE01000112.1 Protein Homology CDS 67507 67986 . - 0 ID=cds-TMR43080.1;Parent=gene-E3V84_11500;Dbxref=NCBI_GP:TMR43080.1;Name=TMR43080.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358071.1;locus_tag=E3V84_11500;product=ribosome maturation factor RimP;protein_id=TMR43080.1;transl_table=11 SOQE01000112.1 Genbank gene 68112 68747 . - . ID=gene-E3V84_11505;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=E3V84_11505 SOQE01000112.1 Protein Homology CDS 68112 68747 . - 0 ID=cds-TMR43081.1;Parent=gene-E3V84_11505;Dbxref=NCBI_GP:TMR43081.1;Name=TMR43081.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358070.1;locus_tag=E3V84_11505;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=TMR43081.1;transl_table=11 SOQE01000112.1 Genbank gene 68744 69538 . - . ID=gene-E3V84_11510;Name=E3V84_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11510 SOQE01000112.1 Protein Homology CDS 68744 69538 . - 0 ID=cds-TMR43082.1;Parent=gene-E3V84_11510;Dbxref=NCBI_GP:TMR43082.1;Name=TMR43082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358069.1;locus_tag=E3V84_11510;product=aminoglycoside phosphotransferase;protein_id=TMR43082.1;transl_table=11 SOQE01000112.1 Genbank gene 69696 70307 . - . ID=gene-E3V84_11515;Name=E3V84_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11515 SOQE01000112.1 Protein Homology CDS 69696 70307 . - 0 ID=cds-TMR43083.1;Parent=gene-E3V84_11515;Dbxref=NCBI_GP:TMR43083.1;Name=TMR43083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358068.1;locus_tag=E3V84_11515;product=CPBP family intramembrane metalloprotease;protein_id=TMR43083.1;transl_table=11 SOQE01000112.1 Genbank gene 70337 70585 . - . ID=gene-E3V84_11520;Name=E3V84_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11520 SOQE01000112.1 Protein Homology CDS 70337 70585 . - 0 ID=cds-TMR43084.1;Parent=gene-E3V84_11520;Dbxref=NCBI_GP:TMR43084.1;Name=TMR43084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399200.1;locus_tag=E3V84_11520;product=hypothetical protein;protein_id=TMR43084.1;transl_table=11 SOQE01000112.1 Genbank gene 70626 71315 . - . ID=gene-E3V84_11525;Name=E3V84_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11525 SOQE01000112.1 Protein Homology CDS 70626 71315 . - 0 ID=cds-TMR43085.1;Parent=gene-E3V84_11525;Dbxref=NCBI_GP:TMR43085.1;Name=TMR43085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447088.1;locus_tag=E3V84_11525;product=CPBP family intramembrane metalloprotease;protein_id=TMR43085.1;transl_table=11 SOQE01000112.1 Genbank gene 71347 71580 . - . ID=gene-E3V84_11530;Name=E3V84_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11530 SOQE01000112.1 Protein Homology CDS 71347 71580 . - 0 ID=cds-TMR43086.1;Parent=gene-E3V84_11530;Dbxref=NCBI_GP:TMR43086.1;Name=TMR43086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358064.1;locus_tag=E3V84_11530;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=TMR43086.1;transl_table=11 SOQE01000112.1 Genbank gene 71825 72862 . - . ID=gene-E3V84_11535;Name=E3V84_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11535 SOQE01000112.1 Protein Homology CDS 71825 72862 . - 0 ID=cds-TMR43087.1;Parent=gene-E3V84_11535;Dbxref=NCBI_GP:TMR43087.1;Name=TMR43087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744512.1;locus_tag=E3V84_11535;product=transposase;protein_id=TMR43087.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 73023 73281 . - . ID=gene-E3V84_11540;Name=E3V84_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11540;pseudo=true SOQE01000112.1 Protein Homology CDS 73023 73281 . - 0 ID=cds-E3V84_11540;Parent=gene-E3V84_11540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845206.1;locus_tag=E3V84_11540;product=immunity protein;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 73667 73885 . - . ID=gene-E3V84_11545;Name=E3V84_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11545 SOQE01000112.1 Protein Homology CDS 73667 73885 . - 0 ID=cds-TMR43088.1;Parent=gene-E3V84_11545;Dbxref=NCBI_GP:TMR43088.1;Name=TMR43088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438253.1;locus_tag=E3V84_11545;product=hypothetical protein;protein_id=TMR43088.1;transl_table=11 SOQE01000112.1 Genbank gene 73891 74265 . - . ID=gene-E3V84_11550;Name=E3V84_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11550 SOQE01000112.1 Protein Homology CDS 73891 74265 . - 0 ID=cds-TMR43089.1;Parent=gene-E3V84_11550;Dbxref=NCBI_GP:TMR43089.1;Name=TMR43089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270580.1;locus_tag=E3V84_11550;product=immunity protein;protein_id=TMR43089.1;transl_table=11 SOQE01000112.1 Genbank gene 74317 74544 . - . ID=gene-E3V84_11555;Name=E3V84_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11555 SOQE01000112.1 Protein Homology CDS 74317 74544 . - 0 ID=cds-TMR43090.1;Parent=gene-E3V84_11555;Dbxref=NCBI_GP:TMR43090.1;Name=TMR43090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379955.1;locus_tag=E3V84_11555;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=TMR43090.1;transl_table=11 SOQE01000112.1 Genbank gene 74812 76965 . + . ID=gene-E3V84_11560;Name=blpA;gbkey=Gene;gene=blpA;gene_biotype=protein_coding;locus_tag=E3V84_11560 SOQE01000112.1 Protein Homology CDS 74812 76965 . + 0 ID=cds-TMR43091.1;Parent=gene-E3V84_11560;Dbxref=NCBI_GP:TMR43091.1;Name=TMR43091.1;gbkey=CDS;gene=blpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125458604.1;locus_tag=E3V84_11560;product=peptide cleavage/export ABC transporter BlpA;protein_id=TMR43091.1;transl_table=11 SOQE01000112.1 Genbank gene 76976 78337 . + . ID=gene-E3V84_11565;Name=E3V84_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11565 SOQE01000112.1 Protein Homology CDS 76976 78337 . + 0 ID=cds-TMR43092.1;Parent=gene-E3V84_11565;Dbxref=NCBI_GP:TMR43092.1;Name=TMR43092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069090.1;locus_tag=E3V84_11565;product=bacteriocin secretion accessory protein;protein_id=TMR43092.1;transl_table=11 SOQE01000112.1 Genbank gene 78394 78549 . + . ID=gene-E3V84_11570;Name=blpC;gbkey=Gene;gene=blpC;gene_biotype=protein_coding;locus_tag=E3V84_11570 SOQE01000112.1 Protein Homology CDS 78394 78549 . + 0 ID=cds-TMR43093.1;Parent=gene-E3V84_11570;Dbxref=NCBI_GP:TMR43093.1;Name=TMR43093.1;gbkey=CDS;gene=blpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358810.1;locus_tag=E3V84_11570;product=quorum-sensing system pheromone BlpC;protein_id=TMR43093.1;transl_table=11 SOQE01000112.1 Genbank gene 78594 79934 . - . ID=gene-E3V84_11575;Name=E3V84_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11575 SOQE01000112.1 Protein Homology CDS 78594 79934 . - 0 ID=cds-TMR43094.1;Parent=gene-E3V84_11575;Dbxref=NCBI_GP:TMR43094.1;Name=TMR43094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358058.1;locus_tag=E3V84_11575;product=sensor histidine kinase;protein_id=TMR43094.1;transl_table=11 SOQE01000112.1 Genbank gene 79948 80685 . - . ID=gene-E3V84_11580;Name=E3V84_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11580 SOQE01000112.1 Protein Homology CDS 79948 80685 . - 0 ID=cds-TMR43095.1;Parent=gene-E3V84_11580;Dbxref=NCBI_GP:TMR43095.1;Name=TMR43095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445505.1;locus_tag=E3V84_11580;product=response regulator transcription factor;protein_id=TMR43095.1;transl_table=11 SOQE01000112.1 Genbank gene 80690 81028 . - . ID=gene-E3V84_11585;Name=E3V84_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11585 SOQE01000112.1 Protein Homology CDS 80690 81028 . - 0 ID=cds-TMR43096.1;Parent=gene-E3V84_11585;Dbxref=NCBI_GP:TMR43096.1;Name=TMR43096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445504.1;locus_tag=E3V84_11585;product=response regulator transcription factor;protein_id=TMR43096.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 81387 81638 . + . ID=gene-E3V84_11590;Name=E3V84_11590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11590;pseudo=true SOQE01000112.1 Protein Homology CDS 81387 81638 . + 0 ID=cds-E3V84_11590;Parent=gene-E3V84_11590;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130045.1;locus_tag=E3V84_11590;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 81667 81990 . + . ID=gene-E3V84_11595;Name=E3V84_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11595 SOQE01000112.1 Protein Homology CDS 81667 81990 . + 0 ID=cds-TMR43097.1;Parent=gene-E3V84_11595;Dbxref=NCBI_GP:TMR43097.1;Name=TMR43097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399208.1;locus_tag=E3V84_11595;product=helicase BlpT;protein_id=TMR43097.1;transl_table=11 SOQE01000112.1 Genbank gene 82052 83101 . - . ID=gene-E3V84_11600;Name=E3V84_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11600 SOQE01000112.1 Protein Homology CDS 82052 83101 . - 0 ID=cds-TMR43098.1;Parent=gene-E3V84_11600;Dbxref=NCBI_GP:TMR43098.1;Name=TMR43098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358054.1;locus_tag=E3V84_11600;product=ABC transporter permease;protein_id=TMR43098.1;transl_table=11 SOQE01000112.1 Genbank gene 83098 83829 . - . ID=gene-E3V84_11605;Name=E3V84_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11605 SOQE01000112.1 Protein Homology CDS 83098 83829 . - 0 ID=cds-TMR43099.1;Parent=gene-E3V84_11605;Dbxref=NCBI_GP:TMR43099.1;Name=TMR43099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445501.1;locus_tag=E3V84_11605;product=ABC transporter ATP-binding protein;protein_id=TMR43099.1;transl_table=11 SOQE01000112.1 Genbank gene 83897 84307 . + . ID=gene-E3V84_11610;Name=E3V84_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11610 SOQE01000112.1 Protein Homology CDS 83897 84307 . + 0 ID=cds-TMR43100.1;Parent=gene-E3V84_11610;Dbxref=NCBI_GP:TMR43100.1;Name=TMR43100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445500.1;locus_tag=E3V84_11610;product=HIT family protein;protein_id=TMR43100.1;transl_table=11 SOQE01000112.1 Genbank gene 84317 84604 . + . ID=gene-E3V84_11615;Name=E3V84_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11615 SOQE01000112.1 Protein Homology CDS 84317 84604 . + 0 ID=cds-TMR43101.1;Parent=gene-E3V84_11615;Dbxref=NCBI_GP:TMR43101.1;Name=TMR43101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445499.1;locus_tag=E3V84_11615;product=hypothetical protein;protein_id=TMR43101.1;transl_table=11 SOQE01000112.1 Genbank gene 85287 86426 . - . ID=gene-E3V84_11620;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=E3V84_11620 SOQE01000112.1 Protein Homology CDS 85287 86426 . - 0 ID=cds-TMR43102.1;Parent=gene-E3V84_11620;Dbxref=NCBI_GP:TMR43102.1;Name=TMR43102.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445497.1;locus_tag=E3V84_11620;product=molecular chaperone DnaJ;protein_id=TMR43102.1;transl_table=11 SOQE01000112.1 Genbank gene 86705 87106 . - . ID=gene-E3V84_11625;Name=E3V84_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11625 SOQE01000112.1 Protein Homology CDS 86705 87106 . - 0 ID=cds-TMR43103.1;Parent=gene-E3V84_11625;Dbxref=NCBI_GP:TMR43103.1;Name=TMR43103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114360.1;locus_tag=E3V84_11625;product=tRNA (guanine-N7)-methyltransferase;protein_id=TMR43103.1;transl_table=11 SOQE01000112.1 Genbank gene 87108 88931 . - . ID=gene-E3V84_11630;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=E3V84_11630 SOQE01000112.1 Protein Homology CDS 87108 88931 . - 0 ID=cds-TMR43104.1;Parent=gene-E3V84_11630;Dbxref=NCBI_GP:TMR43104.1;Name=TMR43104.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=E3V84_11630;product=molecular chaperone DnaK;protein_id=TMR43104.1;transl_table=11 SOQE01000112.1 Genbank gene 89408 89932 . - . ID=gene-E3V84_11635;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=E3V84_11635 SOQE01000112.1 Protein Homology CDS 89408 89932 . - 0 ID=cds-TMR43105.1;Parent=gene-E3V84_11635;Dbxref=NCBI_GP:TMR43105.1;Name=TMR43105.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445493.1;locus_tag=E3V84_11635;product=nucleotide exchange factor GrpE;protein_id=TMR43105.1;transl_table=11 SOQE01000112.1 Genbank gene 89959 90993 . - . ID=gene-E3V84_11640;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=E3V84_11640 SOQE01000112.1 Protein Homology CDS 89959 90993 . - 0 ID=cds-TMR43113.1;Parent=gene-E3V84_11640;Dbxref=NCBI_GP:TMR43113.1;Name=TMR43113.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445492.1;locus_tag=E3V84_11640;product=heat-inducible transcriptional repressor HrcA;protein_id=TMR43113.1;transl_table=11 SOQE01000112.1 Genbank pseudogene 91133 91667 . - . ID=gene-E3V84_11645;Name=E3V84_11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11645;pseudo=true SOQE01000112.1 Protein Homology CDS 91133 91667 . - 0 ID=cds-E3V84_11645;Parent=gene-E3V84_11645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088699.1;locus_tag=E3V84_11645;product=DUF2812 domain-containing protein;pseudo=true;transl_table=11 SOQE01000112.1 Genbank gene 91702 91902 . - . ID=gene-E3V84_11650;Name=E3V84_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11650 SOQE01000112.1 Protein Homology CDS 91702 91902 . - 0 ID=cds-TMR43106.1;Parent=gene-E3V84_11650;Dbxref=NCBI_GP:TMR43106.1;Name=TMR43106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358045.1;locus_tag=E3V84_11650;product=hypothetical protein;protein_id=TMR43106.1;transl_table=11 SOQE01000112.1 Genbank gene 92275 94608 . + . ID=gene-E3V84_11655;Name=E3V84_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11655 SOQE01000112.1 Protein Homology CDS 92275 94608 . + 0 ID=cds-TMR43107.1;Parent=gene-E3V84_11655;Dbxref=NCBI_GP:TMR43107.1;Name=TMR43107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358044.1;locus_tag=E3V84_11655;product=DEAD/DEAH box helicase;protein_id=TMR43107.1;transl_table=11 SOQE01000112.1 Genbank gene 94621 96084 . + . ID=gene-E3V84_11660;Name=E3V84_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11660 SOQE01000112.1 Protein Homology CDS 94621 96084 . + 0 ID=cds-TMR43108.1;Parent=gene-E3V84_11660;Dbxref=NCBI_GP:TMR43108.1;Name=TMR43108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358043.1;locus_tag=E3V84_11660;product=SAM-dependent DNA methyltransferase;protein_id=TMR43108.1;transl_table=11 SOQE01000112.1 Genbank gene 96084 96401 . + . ID=gene-E3V84_11665;Name=E3V84_11665;end_range=96401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11665;partial=true SOQE01000112.1 Protein Homology CDS 96084 96401 . + 0 ID=cds-TMR43109.1;Parent=gene-E3V84_11665;Dbxref=NCBI_GP:TMR43109.1;Name=TMR43109.1;end_range=96401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358042.1;locus_tag=E3V84_11665;partial=true;product=restriction endonuclease subunit S;protein_id=TMR43109.1;transl_table=11 ##sequence-region SOQE01000113.1 1 4849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000113.1 Genbank region 1 4849 . + . ID=SOQE01000113.1:1..4849;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000113.1 Genbank gene 217 519 . + . ID=gene-E3V84_11670;Name=E3V84_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11670 SOQE01000113.1 Protein Homology CDS 217 519 . + 0 ID=cds-TMR42937.1;Parent=gene-E3V84_11670;Dbxref=NCBI_GP:TMR42937.1;Name=TMR42937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003007068.1;locus_tag=E3V84_11670;product=hypothetical protein;protein_id=TMR42937.1;transl_table=11 SOQE01000113.1 Genbank gene 969 2471 . + . ID=gene-E3V84_11675;Name=E3V84_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11675 SOQE01000113.1 Protein Homology CDS 969 2471 . + 0 ID=cds-TMR42938.1;Parent=gene-E3V84_11675;Dbxref=NCBI_GP:TMR42938.1;Name=TMR42938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121181.1;locus_tag=E3V84_11675;product=plasmid recombination protein;protein_id=TMR42938.1;transl_table=11 SOQE01000113.1 Genbank gene 3448 4257 . + . ID=gene-E3V84_11680;Name=E3V84_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11680 SOQE01000113.1 Protein Homology CDS 3448 4257 . + 0 ID=cds-TMR42939.1;Parent=gene-E3V84_11680;Dbxref=NCBI_GP:TMR42939.1;Name=TMR42939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715517.1;locus_tag=E3V84_11680;product=RepB family plasmid replication initiator protein;protein_id=TMR42939.1;transl_table=11 SOQE01000113.1 Genbank gene 4431 4849 . - . ID=gene-E3V84_11685;Name=E3V84_11685;end_range=4849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11685;partial=true SOQE01000113.1 Protein Homology CDS 4431 4849 . - 2 ID=cds-TMR42940.1;Parent=gene-E3V84_11685;Dbxref=NCBI_GP:TMR42940.1;Name=TMR42940.1;end_range=4849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733562.1;locus_tag=E3V84_11685;partial=true;product=hypothetical protein;protein_id=TMR42940.1;transl_table=11 ##sequence-region SOQE01000114.1 1 2090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000114.1 Genbank region 1 2090 . + . ID=SOQE01000114.1:1..2090;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000114.1 Genbank pseudogene 1 1803 . - . ID=gene-E3V84_11690;Name=E3V84_11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11690;pseudo=true SOQE01000114.1 Protein Homology CDS 1 1803 . - 0 ID=cds-E3V84_11690;Parent=gene-E3V84_11690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=E3V84_11690;product=tail fiber domain-containing protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000115.1 1 47464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000115.1 Genbank region 1 47464 . + . ID=SOQE01000115.1:1..47464;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000115.1 Genbank gene 1 248 . + . ID=gene-E3V84_11695;Name=E3V84_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11695;partial=true;start_range=.,1 SOQE01000115.1 Protein Homology CDS 1 248 . + 2 ID=cds-TMR42784.1;Parent=gene-E3V84_11695;Dbxref=NCBI_GP:TMR42784.1;Name=TMR42784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445715.1;locus_tag=E3V84_11695;partial=true;product=hypothetical protein;protein_id=TMR42784.1;start_range=.,1;transl_table=11 SOQE01000115.1 Genbank pseudogene 245 364 . + . ID=gene-E3V84_11700;Name=E3V84_11700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11700;pseudo=true SOQE01000115.1 Protein Homology CDS 245 364 . + 0 ID=cds-E3V84_11700;Parent=gene-E3V84_11700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240924.1;locus_tag=E3V84_11700;product=flagellar assembly protein H domain protein;pseudo=true;transl_table=11 SOQE01000115.1 Genbank pseudogene 852 1451 . + . ID=gene-E3V84_11705;Name=E3V84_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11705;pseudo=true SOQE01000115.1 Protein Homology CDS 852 1451 . + 0 ID=cds-E3V84_11705;Parent=gene-E3V84_11705;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998388.1;locus_tag=E3V84_11705;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 1686 3077 . + . ID=gene-E3V84_11710;Name=E3V84_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11710 SOQE01000115.1 Protein Homology CDS 1686 3077 . + 0 ID=cds-TMR42785.1;Parent=gene-E3V84_11710;Dbxref=NCBI_GP:TMR42785.1;Name=TMR42785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358926.1;locus_tag=E3V84_11710;product=peptidoglycan GlcNAc deacetylase;protein_id=TMR42785.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 3192 3966 . + . ID=gene-E3V84_11715;Name=E3V84_11715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11715;pseudo=true SOQE01000115.1 Protein Homology CDS 3192 3966 . + 0 ID=cds-E3V84_11715;Parent=gene-E3V84_11715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358925.1;locus_tag=E3V84_11715;product=aldo/keto reductase;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 4241 5002 . + . ID=gene-E3V84_11720;Name=E3V84_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11720 SOQE01000115.1 Protein Homology CDS 4241 5002 . + 0 ID=cds-TMR42786.1;Parent=gene-E3V84_11720;Dbxref=NCBI_GP:TMR42786.1;Name=TMR42786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035812.1;locus_tag=E3V84_11720;product=elongation factor Tu;protein_id=TMR42786.1;transl_table=11 SOQE01000115.1 Genbank gene 5371 6288 . + . ID=gene-E3V84_11725;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=E3V84_11725 SOQE01000115.1 Protein Homology CDS 5371 6288 . + 0 ID=cds-TMR42787.1;Parent=gene-E3V84_11725;Dbxref=NCBI_GP:TMR42787.1;Name=TMR42787.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446498.1;locus_tag=E3V84_11725;product=glycine--tRNA ligase subunit alpha;protein_id=TMR42787.1;transl_table=11 SOQE01000115.1 Genbank gene 6500 8536 . + . ID=gene-E3V84_11730;Name=E3V84_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11730 SOQE01000115.1 Protein Homology CDS 6500 8536 . + 0 ID=cds-TMR42788.1;Parent=gene-E3V84_11730;Dbxref=NCBI_GP:TMR42788.1;Name=TMR42788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358921.1;locus_tag=E3V84_11730;product=glycine--tRNA ligase subunit beta;protein_id=TMR42788.1;transl_table=11 SOQE01000115.1 Genbank gene 8579 8836 . + . ID=gene-E3V84_11735;Name=E3V84_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11735 SOQE01000115.1 Protein Homology CDS 8579 8836 . + 0 ID=cds-TMR42789.1;Parent=gene-E3V84_11735;Dbxref=NCBI_GP:TMR42789.1;Name=TMR42789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446496.1;locus_tag=E3V84_11735;product=DUF896 family protein;protein_id=TMR42789.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 8936 9145 . - . ID=gene-E3V84_11740;Name=E3V84_11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11740;pseudo=true SOQE01000115.1 Protein Homology CDS 8936 9145 . - 0 ID=cds-E3V84_11740;Parent=gene-E3V84_11740;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446493.1;locus_tag=E3V84_11740;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 9183 9985 . + . ID=gene-E3V84_11745;Name=E3V84_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11745 SOQE01000115.1 Protein Homology CDS 9183 9639 . + 0 ID=cds-TMR42790.1;Parent=gene-E3V84_11745;Dbxref=NCBI_GP:TMR42790.1;Name=TMR42790.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_11745;product=IS5 family transposase;protein_id=TMR42790.1;transl_table=11 SOQE01000115.1 Protein Homology CDS 9639 9985 . + 2 ID=cds-TMR42790.1;Parent=gene-E3V84_11745;Dbxref=NCBI_GP:TMR42790.1;Name=TMR42790.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_11745;product=IS5 family transposase;protein_id=TMR42790.1;transl_table=11 SOQE01000115.1 Genbank gene 10131 10349 . + . ID=gene-E3V84_11750;Name=E3V84_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11750 SOQE01000115.1 Protein Homology CDS 10131 10349 . + 0 ID=cds-TMR42822.1;Parent=gene-E3V84_11750;Dbxref=NCBI_GP:TMR42822.1;Name=TMR42822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813351.1;locus_tag=E3V84_11750;product=hypothetical protein;protein_id=TMR42822.1;transl_table=11 SOQE01000115.1 Genbank gene 10382 10975 . + . ID=gene-E3V84_11755;Name=E3V84_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11755 SOQE01000115.1 Protein Homology CDS 10382 10975 . + 0 ID=cds-TMR42791.1;Parent=gene-E3V84_11755;Dbxref=NCBI_GP:TMR42791.1;Name=TMR42791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397557.1;locus_tag=E3V84_11755;product=ABC transporter ATP-binding protein;protein_id=TMR42791.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 10972 12154 . + . ID=gene-E3V84_11760;Name=E3V84_11760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11760;pseudo=true SOQE01000115.1 Protein Homology CDS 10972 12154 . + 0 ID=cds-E3V84_11760;Parent=gene-E3V84_11760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655830.1;locus_tag=E3V84_11760;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 12435 12992 . + . ID=gene-E3V84_11765;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=E3V84_11765 SOQE01000115.1 Protein Homology CDS 12435 12992 . + 0 ID=cds-TMR42792.1;Parent=gene-E3V84_11765;Dbxref=NCBI_GP:TMR42792.1;Name=TMR42792.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446071.1;locus_tag=E3V84_11765;product=translation initiation factor IF-3;protein_id=TMR42792.1;transl_table=11 SOQE01000115.1 Genbank gene 13025 13225 . + . ID=gene-E3V84_11770;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=E3V84_11770 SOQE01000115.1 Protein Homology CDS 13025 13225 . + 0 ID=cds-TMR42793.1;Parent=gene-E3V84_11770;Dbxref=NCBI_GP:TMR42793.1;Name=TMR42793.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=E3V84_11770;product=50S ribosomal protein L35;protein_id=TMR42793.1;transl_table=11 SOQE01000115.1 Genbank gene 13277 13636 . + . ID=gene-E3V84_11775;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=E3V84_11775 SOQE01000115.1 Protein Homology CDS 13277 13636 . + 0 ID=cds-TMR42794.1;Parent=gene-E3V84_11775;Dbxref=NCBI_GP:TMR42794.1;Name=TMR42794.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=E3V84_11775;product=50S ribosomal protein L20;protein_id=TMR42794.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 13694 14075 . + . ID=gene-E3V84_11780;Name=E3V84_11780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11780;pseudo=true SOQE01000115.1 Protein Homology CDS 13694 14075 . + 0 ID=cds-E3V84_11780;Parent=gene-E3V84_11780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446074.1;locus_tag=E3V84_11780;product=lactoylglutathione lyase;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 14323 15123 . + . ID=gene-E3V84_11785;Name=E3V84_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11785 SOQE01000115.1 Protein Homology CDS 14323 15123 . + 0 ID=cds-TMR42795.1;Parent=gene-E3V84_11785;Dbxref=NCBI_GP:TMR42795.1;Name=TMR42795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358459.1;locus_tag=E3V84_11785;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=TMR42795.1;transl_table=11 SOQE01000115.1 Genbank gene 15134 16072 . + . ID=gene-E3V84_11790;Name=E3V84_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11790 SOQE01000115.1 Protein Homology CDS 15134 16072 . + 0 ID=cds-TMR42796.1;Parent=gene-E3V84_11790;Dbxref=NCBI_GP:TMR42796.1;Name=TMR42796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358460.2;locus_tag=E3V84_11790;product=dihydroorotate dehydrogenase;protein_id=TMR42796.1;transl_table=11 SOQE01000115.1 Genbank gene 16114 17883 . + . ID=gene-E3V84_11795;Name=E3V84_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11795 SOQE01000115.1 Protein Homology CDS 16114 17883 . + 0 ID=cds-TMR42797.1;Parent=gene-E3V84_11795;Dbxref=NCBI_GP:TMR42797.1;Name=TMR42797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358461.1;locus_tag=E3V84_11795;product=endo-beta-N-acetylglucosaminidase;protein_id=TMR42797.1;transl_table=11 SOQE01000115.1 Genbank gene 17944 19599 . - . ID=gene-E3V84_11800;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=E3V84_11800 SOQE01000115.1 Protein Homology CDS 17944 19599 . - 0 ID=cds-TMR42798.1;Parent=gene-E3V84_11800;Dbxref=NCBI_GP:TMR42798.1;Name=TMR42798.1;gbkey=CDS;gene=pavA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446079.1;locus_tag=E3V84_11800;product=fibronectin-binding protein PavA;protein_id=TMR42798.1;transl_table=11 SOQE01000115.1 Genbank gene 19704 20201 . + . ID=gene-E3V84_11805;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=E3V84_11805 SOQE01000115.1 Protein Homology CDS 19704 20201 . + 0 ID=cds-TMR42799.1;Parent=gene-E3V84_11805;Dbxref=NCBI_GP:TMR42799.1;Name=TMR42799.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=E3V84_11805;product=rRNA maturation RNase YbeY;protein_id=TMR42799.1;transl_table=11 SOQE01000115.1 Genbank gene 20182 20577 . + . ID=gene-E3V84_11810;Name=E3V84_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11810 SOQE01000115.1 Protein Homology CDS 20182 20577 . + 0 ID=cds-TMR42800.1;Parent=gene-E3V84_11810;Dbxref=NCBI_GP:TMR42800.1;Name=TMR42800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358464.1;locus_tag=E3V84_11810;product=diacylglycerol kinase;protein_id=TMR42800.1;transl_table=11 SOQE01000115.1 Genbank gene 20594 21493 . + . ID=gene-E3V84_11815;Name=E3V84_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11815 SOQE01000115.1 Protein Homology CDS 20594 21493 . + 0 ID=cds-TMR42801.1;Parent=gene-E3V84_11815;Dbxref=NCBI_GP:TMR42801.1;Name=TMR42801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935752.1;locus_tag=E3V84_11815;product=GTPase Era;protein_id=TMR42801.1;transl_table=11 SOQE01000115.1 Genbank gene 21542 22366 . + . ID=gene-E3V84_11820;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=E3V84_11820 SOQE01000115.1 Protein Homology CDS 21542 22366 . + 0 ID=cds-TMR42802.1;Parent=gene-E3V84_11820;Dbxref=NCBI_GP:TMR42802.1;Name=TMR42802.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358466.1;locus_tag=E3V84_11820;product=DNA-formamidopyrimidine glycosylase;protein_id=TMR42802.1;transl_table=11 SOQE01000115.1 Genbank gene 22366 22971 . + . ID=gene-E3V84_11825;Name=E3V84_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11825 SOQE01000115.1 Protein Homology CDS 22366 22971 . + 0 ID=cds-TMR42803.1;Parent=gene-E3V84_11825;Dbxref=NCBI_GP:TMR42803.1;Name=TMR42803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446084.1;locus_tag=E3V84_11825;product=dephospho-CoA kinase;protein_id=TMR42803.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 22958 24128 . + . ID=gene-E3V84_11830;Name=E3V84_11830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11830;pseudo=true SOQE01000115.1 Protein Homology CDS 22958 24128 . + 0 ID=cds-E3V84_11830;Parent=gene-E3V84_11830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358469.1;locus_tag=E3V84_11830;product=MFS transporter;pseudo=true;transl_table=11 SOQE01000115.1 Genbank pseudogene 24165 24863 . + . ID=gene-E3V84_11835;Name=E3V84_11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11835;pseudo=true SOQE01000115.1 Protein Homology CDS 24165 24863 . + 0 ID=cds-E3V84_11835;Parent=gene-E3V84_11835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_11835;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000115.1 Genbank pseudogene 24966 25073 . + . ID=gene-E3V84_11840;Name=E3V84_11840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11840;pseudo=true SOQE01000115.1 Protein Homology CDS 24966 25073 . + 0 ID=cds-E3V84_11840;Parent=gene-E3V84_11840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_11840;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 25106 25933 . + . ID=gene-E3V84_11845;Name=E3V84_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11845 SOQE01000115.1 Protein Homology CDS 25106 25933 . + 0 ID=cds-TMR42804.1;Parent=gene-E3V84_11845;Dbxref=NCBI_GP:TMR42804.1;Name=TMR42804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446477.1;locus_tag=E3V84_11845;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR42804.1;transl_table=11 SOQE01000115.1 Genbank gene 25983 26570 . + . ID=gene-E3V84_11850;Name=E3V84_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11850 SOQE01000115.1 Protein Homology CDS 25983 26570 . + 0 ID=cds-TMR42805.1;Parent=gene-E3V84_11850;Dbxref=NCBI_GP:TMR42805.1;Name=TMR42805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446476.1;locus_tag=E3V84_11850;product=1-alkyl-2-acetylglycerophosphocholine esterase;protein_id=TMR42805.1;transl_table=11 SOQE01000115.1 Genbank gene 26654 27379 . + . ID=gene-E3V84_11855;Name=E3V84_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11855 SOQE01000115.1 Protein Homology CDS 26654 27379 . + 0 ID=cds-TMR42806.1;Parent=gene-E3V84_11855;Dbxref=NCBI_GP:TMR42806.1;Name=TMR42806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446454.1;locus_tag=E3V84_11855;product=proteinase;protein_id=TMR42806.1;transl_table=11 SOQE01000115.1 Genbank gene 27376 28311 . + . ID=gene-E3V84_11860;Name=E3V84_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11860 SOQE01000115.1 Protein Homology CDS 27376 28311 . + 0 ID=cds-TMR42807.1;Parent=gene-E3V84_11860;Dbxref=NCBI_GP:TMR42807.1;Name=TMR42807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446453.1;locus_tag=E3V84_11860;product=class A beta-lactamase-related serine hydrolase;protein_id=TMR42807.1;transl_table=11 SOQE01000115.1 Genbank gene 28320 29216 . + . ID=gene-E3V84_11865;Name=E3V84_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11865 SOQE01000115.1 Protein Homology CDS 28320 29216 . + 0 ID=cds-TMR42808.1;Parent=gene-E3V84_11865;Dbxref=NCBI_GP:TMR42808.1;Name=TMR42808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446452.1;locus_tag=E3V84_11865;product=EamA family transporter;protein_id=TMR42808.1;transl_table=11 SOQE01000115.1 Genbank gene 29366 30064 . - . ID=gene-E3V84_11870;Name=E3V84_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11870 SOQE01000115.1 Protein Homology CDS 29366 30064 . - 0 ID=cds-TMR42823.1;Parent=gene-E3V84_11870;Dbxref=NCBI_GP:TMR42823.1;Name=TMR42823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446451.1;locus_tag=E3V84_11870;product=GntR family transcriptional regulator;protein_id=TMR42823.1;transl_table=11 SOQE01000115.1 Genbank gene 30132 30224 . + . ID=gene-E3V84_11875;Name=E3V84_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11875 SOQE01000115.1 Protein Homology CDS 30132 30224 . + 0 ID=cds-TMR42809.1;Parent=gene-E3V84_11875;Dbxref=NCBI_GP:TMR42809.1;Name=TMR42809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_11875;product=DNA alkylation repair protein;protein_id=TMR42809.1;transl_table=11 SOQE01000115.1 Genbank gene 30319 31881 . + . ID=gene-E3V84_11880;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=E3V84_11880 SOQE01000115.1 Protein Homology CDS 30319 31881 . + 0 ID=cds-TMR42810.1;Parent=gene-E3V84_11880;Dbxref=NCBI_GP:TMR42810.1;Name=TMR42810.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446450.1;locus_tag=E3V84_11880;product=glutamine-hydrolyzing GMP synthase;protein_id=TMR42810.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 32040 33252 . + . ID=gene-E3V84_11885;Name=E3V84_11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11885;pseudo=true SOQE01000115.1 Protein Homology CDS 32040 33252 . + 0 ID=cds-E3V84_11885;Parent=gene-E3V84_11885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015926228.1;locus_tag=E3V84_11885;product=type II restriction endonuclease;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 33282 34397 . - . ID=gene-E3V84_11890;Name=E3V84_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11890 SOQE01000115.1 Protein Homology CDS 33282 34397 . - 0 ID=cds-TMR42811.1;Parent=gene-E3V84_11890;Dbxref=NCBI_GP:TMR42811.1;Name=TMR42811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016476470.1;locus_tag=E3V84_11890;product=DNA cytosine methyltransferase;protein_id=TMR42811.1;transl_table=11 SOQE01000115.1 Genbank gene 34416 34610 . - . ID=gene-E3V84_11895;Name=E3V84_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11895 SOQE01000115.1 GeneMarkS-2+ CDS 34416 34610 . - 0 ID=cds-TMR42812.1;Parent=gene-E3V84_11895;Dbxref=NCBI_GP:TMR42812.1;Name=TMR42812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_11895;product=hypothetical protein;protein_id=TMR42812.1;transl_table=11 SOQE01000115.1 Genbank gene 34885 36171 . + . ID=gene-E3V84_11900;Name=E3V84_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11900 SOQE01000115.1 Protein Homology CDS 34885 36171 . + 0 ID=cds-TMR42813.1;Parent=gene-E3V84_11900;Dbxref=NCBI_GP:TMR42813.1;Name=TMR42813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446424.1;locus_tag=E3V84_11900;product=U32 family peptidase;protein_id=TMR42813.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 36508 36860 . + . ID=gene-E3V84_11905;Name=E3V84_11905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11905;pseudo=true SOQE01000115.1 Protein Homology CDS 36508 36860 . + 0 ID=cds-E3V84_11905;Parent=gene-E3V84_11905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220489.1;locus_tag=E3V84_11905;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 36873 37400 . + . ID=gene-E3V84_11910;Name=E3V84_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11910 SOQE01000115.1 Protein Homology CDS 36873 37400 . + 0 ID=cds-TMR42814.1;Parent=gene-E3V84_11910;Dbxref=NCBI_GP:TMR42814.1;Name=TMR42814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=E3V84_11910;product=ATP-binding cassette domain-containing protein;protein_id=TMR42814.1;transl_table=11 SOQE01000115.1 Genbank pseudogene 37416 38137 . + . ID=gene-E3V84_11915;Name=E3V84_11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11915;pseudo=true SOQE01000115.1 Protein Homology CDS 37416 38137 . + 0 ID=cds-E3V84_11915;Parent=gene-E3V84_11915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358873.1;locus_tag=E3V84_11915;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000115.1 Genbank gene 38488 38727 . + . ID=gene-E3V84_11920;Name=E3V84_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11920 SOQE01000115.1 Protein Homology CDS 38488 38727 . + 0 ID=cds-TMR42815.1;Parent=gene-E3V84_11920;Dbxref=NCBI_GP:TMR42815.1;Name=TMR42815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358872.1;locus_tag=E3V84_11920;product=transcriptional regulator;protein_id=TMR42815.1;transl_table=11 SOQE01000115.1 Genbank gene 38717 39205 . + . ID=gene-E3V84_11925;Name=E3V84_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11925 SOQE01000115.1 Protein Homology CDS 38717 39205 . + 0 ID=cds-TMR42816.1;Parent=gene-E3V84_11925;Dbxref=NCBI_GP:TMR42816.1;Name=TMR42816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446595.1;locus_tag=E3V84_11925;product=hypothetical protein;protein_id=TMR42816.1;transl_table=11 SOQE01000115.1 Genbank gene 39321 40781 . + . ID=gene-E3V84_11930;Name=E3V84_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11930 SOQE01000115.1 Protein Homology CDS 39321 40781 . + 0 ID=cds-TMR42817.1;Parent=gene-E3V84_11930;Dbxref=NCBI_GP:TMR42817.1;Name=TMR42817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446594.1;locus_tag=E3V84_11930;product=nicotinate phosphoribosyltransferase;protein_id=TMR42817.1;transl_table=11 SOQE01000115.1 Genbank gene 40778 41602 . + . ID=gene-E3V84_11935;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=E3V84_11935 SOQE01000115.1 Protein Homology CDS 40778 41602 . + 0 ID=cds-TMR42818.1;Parent=gene-E3V84_11935;Dbxref=NCBI_GP:TMR42818.1;Name=TMR42818.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446593.1;locus_tag=E3V84_11935;product=ammonia-dependent NAD(+) synthetase;protein_id=TMR42818.1;transl_table=11 SOQE01000115.1 Genbank gene 41950 42492 . + . ID=gene-E3V84_11940;Name=E3V84_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11940 SOQE01000115.1 Protein Homology CDS 41950 42492 . + 0 ID=cds-TMR42819.1;Parent=gene-E3V84_11940;Dbxref=NCBI_GP:TMR42819.1;Name=TMR42819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358868.1;locus_tag=E3V84_11940;product=N-acetyltransferase;protein_id=TMR42819.1;transl_table=11 SOQE01000115.1 Genbank gene 43122 46193 . + . ID=gene-E3V84_11945;Name=E3V84_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11945 SOQE01000115.1 Genbank CDS 43122 46193 . + 0 ID=cds-TMR42825.1;Parent=gene-E3V84_11945;Dbxref=NCBI_GP:TMR42825.1;Name=TMR42825.1;gbkey=CDS;locus_tag=E3V84_11945;product=PspC-related choline-binding protein;protein_id=TMR42825.1;transl_table=11 SOQE01000115.1 Genbank gene 46464 46649 . + . ID=gene-E3V84_11965;Name=E3V84_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11965 SOQE01000115.1 Protein Homology CDS 46464 46649 . + 0 ID=cds-TMR42820.1;Parent=gene-E3V84_11965;Dbxref=NCBI_GP:TMR42820.1;Name=TMR42820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V84_11965;product=hypothetical protein;protein_id=TMR42820.1;transl_table=11 SOQE01000115.1 Genbank gene 46630 46980 . + . ID=gene-E3V84_11970;Name=E3V84_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11970 SOQE01000115.1 Protein Homology CDS 46630 46980 . + 0 ID=cds-TMR42821.1;Parent=gene-E3V84_11970;Dbxref=NCBI_GP:TMR42821.1;Name=TMR42821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_11970;product=IS66 family insertion sequence hypothetical protein;protein_id=TMR42821.1;transl_table=11 SOQE01000115.1 Genbank gene 47152 47464 . + . ID=gene-E3V84_11975;Name=E3V84_11975;end_range=47464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11975;partial=true SOQE01000115.1 Protein Homology CDS 47152 47464 . + 0 ID=cds-TMR42824.1;Parent=gene-E3V84_11975;Dbxref=NCBI_GP:TMR42824.1;Name=TMR42824.1;end_range=47464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001848168.1;locus_tag=E3V84_11975;partial=true;product=transposase;protein_id=TMR42824.1;transl_table=11 ##sequence-region SOQE01000116.1 1 2289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000116.1 Genbank region 1 2289 . + . ID=SOQE01000116.1:1..2289;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000116.1 Genbank gene 1 370 . + . ID=gene-E3V84_11980;Name=E3V84_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11980;partial=true;start_range=.,1 SOQE01000116.1 Protein Homology CDS 1 370 . + 1 ID=cds-TMR42765.1;Parent=gene-E3V84_11980;Dbxref=NCBI_GP:TMR42765.1;Name=TMR42765.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V84_11980;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR42765.1;start_range=.,1;transl_table=11 SOQE01000116.1 Genbank pseudogene 529 1821 . - . ID=gene-E3V84_11985;Name=E3V84_11985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11985;pseudo=true SOQE01000116.1 Protein Homology CDS 529 1821 . - 0 ID=cds-E3V84_11985;Parent=gene-E3V84_11985;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002948696.1;locus_tag=E3V84_11985;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQE01000116.1 Genbank pseudogene 1899 2063 . - . ID=gene-E3V84_11990;Name=E3V84_11990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_11990;pseudo=true SOQE01000116.1 Protein Homology CDS 1899 2063 . - 0 ID=cds-E3V84_11990;Parent=gene-E3V84_11990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822315.1;locus_tag=E3V84_11990;product=transposase;pseudo=true;transl_table=11 SOQE01000116.1 Genbank gene 2070 2289 . + . ID=gene-E3V84_11995;Name=E3V84_11995;end_range=2289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_11995;partial=true SOQE01000116.1 Protein Homology CDS 2070 2289 . + 0 ID=cds-TMR42766.1;Parent=gene-E3V84_11995;Dbxref=NCBI_GP:TMR42766.1;Name=TMR42766.1;end_range=2289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_11995;partial=true;product=hypothetical protein;protein_id=TMR42766.1;transl_table=11 ##sequence-region SOQE01000117.1 1 3612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000117.1 Genbank region 1 3612 . + . ID=SOQE01000117.1:1..3612;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000117.1 Genbank pseudogene 1 125 . - . ID=gene-E3V84_12000;Name=E3V84_12000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12000;pseudo=true SOQE01000117.1 Protein Homology CDS 1 125 . - 0 ID=cds-E3V84_12000;Parent=gene-E3V84_12000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821945.1;locus_tag=E3V84_12000;product=transposase;pseudo=true;transl_table=11 SOQE01000117.1 Genbank gene 331 1116 . - . ID=gene-E3V84_12005;Name=E3V84_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12005 SOQE01000117.1 Protein Homology CDS 331 1116 . - 0 ID=cds-TMR42757.1;Parent=gene-E3V84_12005;Dbxref=NCBI_GP:TMR42757.1;Name=TMR42757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010202.1;locus_tag=E3V84_12005;product=multidrug ABC transporter permease;protein_id=TMR42757.1;transl_table=11 SOQE01000117.1 Genbank gene 1118 1936 . - . ID=gene-E3V84_12010;Name=E3V84_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12010 SOQE01000117.1 Protein Homology CDS 1118 1936 . - 0 ID=cds-TMR42758.1;Parent=gene-E3V84_12010;Dbxref=NCBI_GP:TMR42758.1;Name=TMR42758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445818.1;locus_tag=E3V84_12010;product=antibiotic ABC transporter permease;protein_id=TMR42758.1;transl_table=11 SOQE01000117.1 Genbank gene 1938 2930 . - . ID=gene-E3V84_12015;Name=E3V84_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12015 SOQE01000117.1 Protein Homology CDS 1938 2930 . - 0 ID=cds-TMR42759.1;Parent=gene-E3V84_12015;Dbxref=NCBI_GP:TMR42759.1;Name=TMR42759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371202.1;locus_tag=E3V84_12015;product=ATP-binding cassette domain-containing protein;protein_id=TMR42759.1;transl_table=11 SOQE01000117.1 Genbank gene 3331 3576 . - . ID=gene-E3V84_12020;Name=E3V84_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12020 SOQE01000117.1 Protein Homology CDS 3331 3576 . - 0 ID=cds-TMR42760.1;Parent=gene-E3V84_12020;Dbxref=NCBI_GP:TMR42760.1;Name=TMR42760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284765.1;locus_tag=E3V84_12020;product=hypothetical protein;protein_id=TMR42760.1;transl_table=11 ##sequence-region SOQE01000118.1 1 611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000118.1 Genbank region 1 611 . + . ID=SOQE01000118.1:1..611;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000118.1 Genbank pseudogene 1 391 . - . ID=gene-E3V84_12025;Name=E3V84_12025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12025;pseudo=true SOQE01000118.1 Protein Homology CDS 1 391 . - 0 ID=cds-E3V84_12025;Parent=gene-E3V84_12025;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=E3V84_12025;product=transposase;pseudo=true;transl_table=11 SOQE01000118.1 Genbank gene 490 561 . + . ID=gene-E3V84_12030;Name=E3V84_12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_12030 SOQE01000118.1 tRNAscan-SE tRNA 490 561 . + . ID=rna-E3V84_12030;Parent=gene-E3V84_12030;anticodon=(pos:523..525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_12030;product=tRNA-Glu SOQE01000118.1 tRNAscan-SE exon 490 561 . + . ID=exon-E3V84_12030-1;Parent=rna-E3V84_12030;anticodon=(pos:523..525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_12030;product=tRNA-Glu ##sequence-region SOQE01000119.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000119.1 Genbank region 1 1055 . + . ID=SOQE01000119.1:1..1055;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000119.1 Genbank gene 1 888 . - . ID=gene-E3V84_12035;Name=E3V84_12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12035;partial=true;start_range=.,1 SOQE01000119.1 Protein Homology CDS 1 888 . - 0 ID=cds-TMR42753.1;Parent=gene-E3V84_12035;Dbxref=NCBI_GP:TMR42753.1;Name=TMR42753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=E3V84_12035;partial=true;product=IS1380-like element ISSpn5 family transposase;protein_id=TMR42753.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000012.1 1 155159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000012.1 Genbank region 1 155159 . + . ID=SOQE01000012.1:1..155159;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000012.1 Genbank gene 1 453 . + . ID=gene-E3V84_01455;Name=E3V84_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01455;partial=true;start_range=.,1 SOQE01000012.1 Protein Homology CDS 1 453 . + 0 ID=cds-TMR48187.1;Parent=gene-E3V84_01455;Dbxref=NCBI_GP:TMR48187.1;Name=TMR48187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_01455;partial=true;product=IS630 family transposase;protein_id=TMR48187.1;start_range=.,1;transl_table=11 SOQE01000012.1 Genbank gene 510 1901 . + . ID=gene-E3V84_01460;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=E3V84_01460 SOQE01000012.1 Protein Homology CDS 510 1901 . + 0 ID=cds-TMR48188.1;Parent=gene-E3V84_01460;Dbxref=NCBI_GP:TMR48188.1;Name=TMR48188.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357697.1;locus_tag=E3V84_01460;product=argininosuccinate lyase;protein_id=TMR48188.1;transl_table=11 SOQE01000012.1 Genbank gene 1811 2122 . - . ID=gene-E3V84_01465;Name=E3V84_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01465 SOQE01000012.1 Protein Homology CDS 1811 2122 . - 0 ID=cds-TMR48189.1;Parent=gene-E3V84_01465;Dbxref=NCBI_GP:TMR48189.1;Name=TMR48189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844315.1;locus_tag=E3V84_01465;product=hypothetical protein;protein_id=TMR48189.1;transl_table=11 SOQE01000012.1 Genbank gene 2294 3157 . - . ID=gene-E3V84_01470;Name=E3V84_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01470 SOQE01000012.1 Protein Homology CDS 2294 3157 . - 0 ID=cds-TMR48190.1;Parent=gene-E3V84_01470;Dbxref=NCBI_GP:TMR48190.1;Name=TMR48190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268160.1;locus_tag=E3V84_01470;product=XRE family transcriptional regulator;protein_id=TMR48190.1;transl_table=11 SOQE01000012.1 Genbank gene 3314 4042 . + . ID=gene-E3V84_01475;Name=E3V84_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01475 SOQE01000012.1 Protein Homology CDS 3314 4042 . + 0 ID=cds-TMR48191.1;Parent=gene-E3V84_01475;Dbxref=NCBI_GP:TMR48191.1;Name=TMR48191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866696.1;locus_tag=E3V84_01475;product=hypothetical protein;protein_id=TMR48191.1;transl_table=11 SOQE01000012.1 Genbank gene 4196 4408 . + . ID=gene-E3V84_01480;Name=E3V84_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01480 SOQE01000012.1 Protein Homology CDS 4196 4408 . + 0 ID=cds-TMR48192.1;Parent=gene-E3V84_01480;Dbxref=NCBI_GP:TMR48192.1;Name=TMR48192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989849.1;locus_tag=E3V84_01480;product=hypothetical protein;protein_id=TMR48192.1;transl_table=11 SOQE01000012.1 Genbank gene 4457 4672 . + . ID=gene-E3V84_01485;Name=E3V84_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01485 SOQE01000012.1 Protein Homology CDS 4457 4672 . + 0 ID=cds-TMR48193.1;Parent=gene-E3V84_01485;Dbxref=NCBI_GP:TMR48193.1;Name=TMR48193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838227.1;locus_tag=E3V84_01485;product=hypothetical protein;protein_id=TMR48193.1;transl_table=11 SOQE01000012.1 Genbank gene 4829 5950 . + . ID=gene-E3V84_01490;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=E3V84_01490 SOQE01000012.1 Protein Homology CDS 4829 5950 . + 0 ID=cds-TMR48194.1;Parent=gene-E3V84_01490;Dbxref=NCBI_GP:TMR48194.1;Name=TMR48194.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447059.1;locus_tag=E3V84_01490;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=TMR48194.1;transl_table=11 SOQE01000012.1 Genbank gene 6064 6546 . + . ID=gene-E3V84_01495;Name=E3V84_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01495 SOQE01000012.1 Protein Homology CDS 6064 6546 . + 0 ID=cds-TMR48195.1;Parent=gene-E3V84_01495;Dbxref=NCBI_GP:TMR48195.1;Name=TMR48195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357717.1;locus_tag=E3V84_01495;product=NUDIX domain-containing protein;protein_id=TMR48195.1;transl_table=11 SOQE01000012.1 Genbank gene 6556 8469 . + . ID=gene-E3V84_01500;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=E3V84_01500 SOQE01000012.1 Protein Homology CDS 6556 8469 . + 0 ID=cds-TMR48196.1;Parent=gene-E3V84_01500;Dbxref=NCBI_GP:TMR48196.1;Name=TMR48196.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447057.1;locus_tag=E3V84_01500;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=TMR48196.1;transl_table=11 SOQE01000012.1 Genbank gene 8673 8879 . + . ID=gene-E3V84_01505;Name=E3V84_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01505 SOQE01000012.1 Protein Homology CDS 8673 8879 . + 0 ID=cds-TMR48197.1;Parent=gene-E3V84_01505;Dbxref=NCBI_GP:TMR48197.1;Name=TMR48197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V84_01505;product=hypothetical protein;protein_id=TMR48197.1;transl_table=11 SOQE01000012.1 Genbank gene 8816 10495 . - . ID=gene-E3V84_01510;Name=E3V84_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01510 SOQE01000012.1 Protein Homology CDS 8816 10495 . - 0 ID=cds-TMR48198.1;Parent=gene-E3V84_01510;Dbxref=NCBI_GP:TMR48198.1;Name=TMR48198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447056.1;locus_tag=E3V84_01510;product=ribonuclease J;protein_id=TMR48198.1;transl_table=11 SOQE01000012.1 Genbank gene 10497 10730 . - . ID=gene-E3V84_01515;Name=E3V84_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01515 SOQE01000012.1 Protein Homology CDS 10497 10730 . - 0 ID=cds-TMR48199.1;Parent=gene-E3V84_01515;Dbxref=NCBI_GP:TMR48199.1;Name=TMR48199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357720.1;locus_tag=E3V84_01515;product=DUF1447 family protein;protein_id=TMR48199.1;transl_table=11 SOQE01000012.1 Genbank gene 11010 11225 . + . ID=gene-E3V84_01520;Name=E3V84_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01520 SOQE01000012.1 Protein Homology CDS 11010 11225 . + 0 ID=cds-TMR48200.1;Parent=gene-E3V84_01520;Dbxref=NCBI_GP:TMR48200.1;Name=TMR48200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447054.1;locus_tag=E3V84_01520;product=hypothetical protein;protein_id=TMR48200.1;transl_table=11 SOQE01000012.1 Genbank gene 11222 11338 . - . ID=gene-E3V84_01525;Name=E3V84_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01525 SOQE01000012.1 Protein Homology CDS 11222 11338 . - 0 ID=cds-TMR48354.1;Parent=gene-E3V84_01525;Dbxref=NCBI_GP:TMR48354.1;Name=TMR48354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823330.1;locus_tag=E3V84_01525;product=competence protein;protein_id=TMR48354.1;transl_table=11 SOQE01000012.1 Genbank gene 11357 11554 . - . ID=gene-E3V84_01530;Name=E3V84_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01530 SOQE01000012.1 Protein Homology CDS 11357 11554 . - 0 ID=cds-TMR48201.1;Parent=gene-E3V84_01530;Dbxref=NCBI_GP:TMR48201.1;Name=TMR48201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315026.1;locus_tag=E3V84_01530;product=hypothetical protein;protein_id=TMR48201.1;transl_table=11 SOQE01000012.1 Genbank gene 11548 11700 . - . ID=gene-E3V84_01535;Name=cibB;gbkey=Gene;gene=cibB;gene_biotype=protein_coding;locus_tag=E3V84_01535 SOQE01000012.1 Protein Homology CDS 11548 11700 . - 0 ID=cds-TMR48202.1;Parent=gene-E3V84_01535;Dbxref=NCBI_GP:TMR48202.1;Name=TMR48202.1;gbkey=CDS;gene=cibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357721.1;locus_tag=E3V84_01535;product=fratricide two-peptide bacteriocin subunit CibB;protein_id=TMR48202.1;transl_table=11 SOQE01000012.1 Genbank gene 11702 11887 . - . ID=gene-E3V84_01540;Name=cibA;gbkey=Gene;gene=cibA;gene_biotype=protein_coding;locus_tag=E3V84_01540 SOQE01000012.1 Protein Homology CDS 11702 11887 . - 0 ID=cds-TMR48203.1;Parent=gene-E3V84_01540;Dbxref=NCBI_GP:TMR48203.1;Name=TMR48203.1;gbkey=CDS;gene=cibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357722.1;locus_tag=E3V84_01540;product=fratricide two-peptide bacteriocin subunit CibA;protein_id=TMR48203.1;transl_table=11 SOQE01000012.1 Genbank gene 12065 12748 . + . ID=gene-E3V84_01545;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=E3V84_01545 SOQE01000012.1 Protein Homology CDS 12065 12748 . + 0 ID=cds-TMR48204.1;Parent=gene-E3V84_01545;Dbxref=NCBI_GP:TMR48204.1;Name=TMR48204.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447049.1;locus_tag=E3V84_01545;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=TMR48204.1;transl_table=11 SOQE01000012.1 Genbank gene 12745 13182 . + . ID=gene-E3V84_01550;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=E3V84_01550 SOQE01000012.1 Protein Homology CDS 12745 13182 . + 0 ID=cds-TMR48205.1;Parent=gene-E3V84_01550;Dbxref=NCBI_GP:TMR48205.1;Name=TMR48205.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357724.1;locus_tag=E3V84_01550;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=TMR48205.1;transl_table=11 SOQE01000012.1 Genbank gene 13172 14182 . + . ID=gene-E3V84_01555;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=E3V84_01555 SOQE01000012.1 Protein Homology CDS 13172 14182 . + 0 ID=cds-TMR48206.1;Parent=gene-E3V84_01555;Dbxref=NCBI_GP:TMR48206.1;Name=TMR48206.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357725.1;locus_tag=E3V84_01555;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=TMR48206.1;transl_table=11 SOQE01000012.1 Genbank gene 14287 15150 . + . ID=gene-E3V84_01560;Name=E3V84_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01560 SOQE01000012.1 Protein Homology CDS 14287 15150 . + 0 ID=cds-TMR48207.1;Parent=gene-E3V84_01560;Dbxref=NCBI_GP:TMR48207.1;Name=TMR48207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357734.1;locus_tag=E3V84_01560;product=helix-turn-helix domain-containing protein;protein_id=TMR48207.1;transl_table=11 SOQE01000012.1 Genbank gene 15645 17570 . + . ID=gene-E3V84_01565;Name=E3V84_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01565 SOQE01000012.1 Protein Homology CDS 15645 17570 . + 0 ID=cds-TMR48208.1;Parent=gene-E3V84_01565;Dbxref=NCBI_GP:TMR48208.1;Name=TMR48208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280049.1;locus_tag=E3V84_01565;product=protein kinase family protein;protein_id=TMR48208.1;transl_table=11 SOQE01000012.1 Genbank gene 17572 18798 . + . ID=gene-E3V84_01570;Name=E3V84_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01570 SOQE01000012.1 Protein Homology CDS 17572 18798 . + 0 ID=cds-TMR48209.1;Parent=gene-E3V84_01570;Dbxref=NCBI_GP:TMR48209.1;Name=TMR48209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862399.1;locus_tag=E3V84_01570;product=MFS transporter;protein_id=TMR48209.1;transl_table=11 SOQE01000012.1 Genbank gene 19072 19767 . + . ID=gene-E3V84_01575;Name=E3V84_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01575 SOQE01000012.1 Protein Homology CDS 19072 19767 . + 0 ID=cds-TMR48210.1;Parent=gene-E3V84_01575;Dbxref=NCBI_GP:TMR48210.1;Name=TMR48210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447044.1;locus_tag=E3V84_01575;product=branched-chain amino acid ABC transporter permease;protein_id=TMR48210.1;transl_table=11 SOQE01000012.1 Genbank gene 19757 20080 . + . ID=gene-E3V84_01580;Name=E3V84_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01580 SOQE01000012.1 Protein Homology CDS 19757 20080 . + 0 ID=cds-TMR48211.1;Parent=gene-E3V84_01580;Dbxref=NCBI_GP:TMR48211.1;Name=TMR48211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447043.1;locus_tag=E3V84_01580;product=AzlD domain-containing protein;protein_id=TMR48211.1;transl_table=11 SOQE01000012.1 Genbank gene 20337 21167 . + . ID=gene-E3V84_01585;Name=E3V84_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01585 SOQE01000012.1 Protein Homology CDS 20337 21167 . + 0 ID=cds-TMR48212.1;Parent=gene-E3V84_01585;Dbxref=NCBI_GP:TMR48212.1;Name=TMR48212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357740.1;locus_tag=E3V84_01585;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR48212.1;transl_table=11 SOQE01000012.1 Genbank gene 21321 22175 . + . ID=gene-E3V84_01590;Name=E3V84_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01590 SOQE01000012.1 Protein Homology CDS 21321 22175 . + 0 ID=cds-TMR48213.1;Parent=gene-E3V84_01590;Dbxref=NCBI_GP:TMR48213.1;Name=TMR48213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357741.1;locus_tag=E3V84_01590;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=TMR48213.1;transl_table=11 SOQE01000012.1 Genbank gene 22272 23645 . + . ID=gene-E3V84_01595;Name=E3V84_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01595 SOQE01000012.1 Protein Homology CDS 22272 23645 . + 0 ID=cds-TMR48214.1;Parent=gene-E3V84_01595;Dbxref=NCBI_GP:TMR48214.1;Name=TMR48214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357742.1;locus_tag=E3V84_01595;product=M20/M25/M40 family metallo-hydrolase;protein_id=TMR48214.1;transl_table=11 SOQE01000012.1 Genbank gene 23638 24699 . + . ID=gene-E3V84_01600;Name=E3V84_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01600 SOQE01000012.1 Protein Homology CDS 23638 24699 . + 0 ID=cds-TMR48215.1;Parent=gene-E3V84_01600;Dbxref=NCBI_GP:TMR48215.1;Name=TMR48215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357743.1;locus_tag=E3V84_01600;product=methionine ABC transporter ATP-binding protein;protein_id=TMR48215.1;transl_table=11 SOQE01000012.1 Genbank gene 24701 25393 . + . ID=gene-E3V84_01605;Name=E3V84_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01605 SOQE01000012.1 Protein Homology CDS 24701 25393 . + 0 ID=cds-TMR48216.1;Parent=gene-E3V84_01605;Dbxref=NCBI_GP:TMR48216.1;Name=TMR48216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447037.1;locus_tag=E3V84_01605;product=ABC transporter permease;protein_id=TMR48216.1;transl_table=11 SOQE01000012.1 Genbank gene 25523 26392 . + . ID=gene-E3V84_01610;Name=E3V84_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01610 SOQE01000012.1 Protein Homology CDS 25523 26392 . + 0 ID=cds-TMR48217.1;Parent=gene-E3V84_01610;Dbxref=NCBI_GP:TMR48217.1;Name=TMR48217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180343.1;locus_tag=E3V84_01610;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR48217.1;transl_table=11 SOQE01000012.1 Genbank gene 26577 27821 . + . ID=gene-E3V84_01615;Name=E3V84_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01615 SOQE01000012.1 Protein Homology CDS 26577 27821 . + 0 ID=cds-TMR48218.1;Parent=gene-E3V84_01615;Dbxref=NCBI_GP:TMR48218.1;Name=TMR48218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014287.1;locus_tag=E3V84_01615;product=transporter;protein_id=TMR48218.1;transl_table=11 SOQE01000012.1 Genbank gene 27859 28062 . + . ID=gene-E3V84_01620;Name=E3V84_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01620 SOQE01000012.1 Protein Homology CDS 27859 28062 . + 0 ID=cds-TMR48219.1;Parent=gene-E3V84_01620;Dbxref=NCBI_GP:TMR48219.1;Name=TMR48219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242033.1;locus_tag=E3V84_01620;product=hypothetical protein;protein_id=TMR48219.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 28257 28487 . - . ID=gene-E3V84_01625;Name=E3V84_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01625;pseudo=true SOQE01000012.1 Protein Homology CDS 28257 28487 . - 0 ID=cds-E3V84_01625;Parent=gene-E3V84_01625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357745.1;locus_tag=E3V84_01625;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 28586 29752 . - . ID=gene-E3V84_01630;Name=E3V84_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01630 SOQE01000012.1 Protein Homology CDS 28586 29752 . - 0 ID=cds-TMR48220.1;Parent=gene-E3V84_01630;Dbxref=NCBI_GP:TMR48220.1;Name=TMR48220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704683.1;locus_tag=E3V84_01630;product=site-specific integrase;protein_id=TMR48220.1;transl_table=11 SOQE01000012.1 Genbank gene 29841 30578 . - . ID=gene-E3V84_01635;Name=E3V84_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01635 SOQE01000012.1 Protein Homology CDS 29841 30578 . - 0 ID=cds-TMR48221.1;Parent=gene-E3V84_01635;Dbxref=NCBI_GP:TMR48221.1;Name=TMR48221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369225.1;locus_tag=E3V84_01635;product=helix-turn-helix domain-containing protein;protein_id=TMR48221.1;transl_table=11 SOQE01000012.1 Genbank gene 30744 30959 . + . ID=gene-E3V84_01640;Name=E3V84_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01640 SOQE01000012.1 Protein Homology CDS 30744 30959 . + 0 ID=cds-TMR48222.1;Parent=gene-E3V84_01640;Dbxref=NCBI_GP:TMR48222.1;Name=TMR48222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864276.1;locus_tag=E3V84_01640;product=XRE family transcriptional regulator;protein_id=TMR48222.1;transl_table=11 SOQE01000012.1 Genbank gene 31081 31389 . + . ID=gene-E3V84_01645;Name=E3V84_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01645 SOQE01000012.1 Protein Homology CDS 31081 31389 . + 0 ID=cds-TMR48223.1;Parent=gene-E3V84_01645;Dbxref=NCBI_GP:TMR48223.1;Name=TMR48223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060826.1;locus_tag=E3V84_01645;product=hypothetical protein;protein_id=TMR48223.1;transl_table=11 SOQE01000012.1 Genbank gene 31504 31932 . + . ID=gene-E3V84_01650;Name=E3V84_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01650 SOQE01000012.1 Protein Homology CDS 31504 31932 . + 0 ID=cds-TMR48224.1;Parent=gene-E3V84_01650;Dbxref=NCBI_GP:TMR48224.1;Name=TMR48224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516652.1;locus_tag=E3V84_01650;product=hypothetical protein;protein_id=TMR48224.1;transl_table=11 SOQE01000012.1 Genbank gene 32297 32563 . + . ID=gene-E3V84_01655;Name=E3V84_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01655 SOQE01000012.1 Protein Homology CDS 32297 32563 . + 0 ID=cds-TMR48225.1;Parent=gene-E3V84_01655;Dbxref=NCBI_GP:TMR48225.1;Name=TMR48225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159340.1;locus_tag=E3V84_01655;product=hypothetical protein;protein_id=TMR48225.1;transl_table=11 SOQE01000012.1 Genbank gene 32556 32771 . + . ID=gene-E3V84_01660;Name=E3V84_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01660 SOQE01000012.1 Protein Homology CDS 32556 32771 . + 0 ID=cds-TMR48226.1;Parent=gene-E3V84_01660;Dbxref=NCBI_GP:TMR48226.1;Name=TMR48226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447106.1;locus_tag=E3V84_01660;product=hypothetical protein;protein_id=TMR48226.1;transl_table=11 SOQE01000012.1 Genbank gene 32768 33025 . + . ID=gene-E3V84_01665;Name=E3V84_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01665 SOQE01000012.1 Protein Homology CDS 32768 33025 . + 0 ID=cds-TMR48227.1;Parent=gene-E3V84_01665;Dbxref=NCBI_GP:TMR48227.1;Name=TMR48227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447105.1;locus_tag=E3V84_01665;product=hypothetical protein;protein_id=TMR48227.1;transl_table=11 SOQE01000012.1 Genbank gene 33040 33312 . + . ID=gene-E3V84_01670;Name=E3V84_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01670 SOQE01000012.1 Protein Homology CDS 33040 33312 . + 0 ID=cds-TMR48228.1;Parent=gene-E3V84_01670;Dbxref=NCBI_GP:TMR48228.1;Name=TMR48228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492129.1;locus_tag=E3V84_01670;product=hypothetical protein;protein_id=TMR48228.1;transl_table=11 SOQE01000012.1 Genbank gene 33309 33824 . + . ID=gene-E3V84_01675;Name=E3V84_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01675 SOQE01000012.1 Protein Homology CDS 33309 33824 . + 0 ID=cds-TMR48229.1;Parent=gene-E3V84_01675;Dbxref=NCBI_GP:TMR48229.1;Name=TMR48229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263812.1;locus_tag=E3V84_01675;product=hypothetical protein;protein_id=TMR48229.1;transl_table=11 SOQE01000012.1 Genbank gene 33817 35271 . + . ID=gene-E3V84_01680;Name=E3V84_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01680 SOQE01000012.1 Protein Homology CDS 33817 35271 . + 0 ID=cds-TMR48230.1;Parent=gene-E3V84_01680;Dbxref=NCBI_GP:TMR48230.1;Name=TMR48230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087513.1;locus_tag=E3V84_01680;product=virulence-associated protein E;protein_id=TMR48230.1;transl_table=11 SOQE01000012.1 Genbank gene 35841 36986 . + . ID=gene-E3V84_01685;Name=E3V84_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01685 SOQE01000012.1 Protein Homology CDS 35841 36986 . + 0 ID=cds-TMR48231.1;Parent=gene-E3V84_01685;Dbxref=NCBI_GP:TMR48231.1;Name=TMR48231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013671.1;locus_tag=E3V84_01685;product=phage major capsid protein;protein_id=TMR48231.1;transl_table=11 SOQE01000012.1 Genbank gene 36990 37820 . + . ID=gene-E3V84_01690;Name=E3V84_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01690 SOQE01000012.1 GeneMarkS-2+ CDS 36990 37820 . + 0 ID=cds-TMR48232.1;Parent=gene-E3V84_01690;Dbxref=NCBI_GP:TMR48232.1;Name=TMR48232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_01690;product=hypothetical protein;protein_id=TMR48232.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 38608 38952 . - . ID=gene-E3V84_01695;Name=E3V84_01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01695;pseudo=true SOQE01000012.1 Protein Homology CDS 38608 38952 . - 0 ID=cds-E3V84_01695;Parent=gene-E3V84_01695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447036.1;locus_tag=E3V84_01695;product=Trep_Strep domain-containing protein;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 39087 39701 . + . ID=gene-E3V84_01700;Name=E3V84_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01700 SOQE01000012.1 Protein Homology CDS 39087 39701 . + 0 ID=cds-TMR48233.1;Parent=gene-E3V84_01700;Dbxref=NCBI_GP:TMR48233.1;Name=TMR48233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447035.1;locus_tag=E3V84_01700;product=DUF624 domain-containing protein;protein_id=TMR48233.1;transl_table=11 SOQE01000012.1 Genbank gene 39679 41349 . + . ID=gene-E3V84_01705;Name=E3V84_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01705 SOQE01000012.1 Protein Homology CDS 39679 41349 . + 0 ID=cds-TMR48234.1;Parent=gene-E3V84_01705;Dbxref=NCBI_GP:TMR48234.1;Name=TMR48234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357747.2;locus_tag=E3V84_01705;product=sensor histidine kinase;protein_id=TMR48234.1;transl_table=11 SOQE01000012.1 Genbank gene 41361 42647 . + . ID=gene-E3V84_01710;Name=E3V84_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01710 SOQE01000012.1 Protein Homology CDS 41361 42647 . + 0 ID=cds-TMR48235.1;Parent=gene-E3V84_01710;Dbxref=NCBI_GP:TMR48235.1;Name=TMR48235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357748.1;locus_tag=E3V84_01710;product=response regulator transcription factor;protein_id=TMR48235.1;transl_table=11 SOQE01000012.1 Genbank gene 42708 43241 . + . ID=gene-E3V84_01715;Name=E3V84_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01715 SOQE01000012.1 Protein Homology CDS 42708 43241 . + 0 ID=cds-TMR48236.1;Parent=gene-E3V84_01715;Dbxref=NCBI_GP:TMR48236.1;Name=TMR48236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729016.1;locus_tag=E3V84_01715;product=ABC transporter permease;protein_id=TMR48236.1;transl_table=11 SOQE01000012.1 Genbank gene 43319 43783 . + . ID=gene-E3V84_01720;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=E3V84_01720 SOQE01000012.1 Protein Homology CDS 43319 43783 . + 0 ID=cds-TMR48237.1;Parent=gene-E3V84_01720;Dbxref=NCBI_GP:TMR48237.1;Name=TMR48237.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357750.2;locus_tag=E3V84_01720;product=ribonucleotide reductase assembly protein NrdI;protein_id=TMR48237.1;transl_table=11 SOQE01000012.1 Genbank gene 43815 43901 . - . ID=gene-E3V84_01725;Name=E3V84_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01725 SOQE01000012.1 Protein Homology CDS 43815 43901 . - 0 ID=cds-TMR48355.1;Parent=gene-E3V84_01725;Dbxref=NCBI_GP:TMR48355.1;Name=TMR48355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001824422.1;locus_tag=E3V84_01725;product=DNA alkylation repair protein;protein_id=TMR48355.1;transl_table=11 SOQE01000012.1 Genbank gene 44082 45344 . - . ID=gene-E3V84_01730;Name=E3V84_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01730 SOQE01000012.1 Protein Homology CDS 44082 45344 . - 0 ID=cds-TMR48238.1;Parent=gene-E3V84_01730;Dbxref=NCBI_GP:TMR48238.1;Name=TMR48238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357751.1;locus_tag=E3V84_01730;product=divalent metal cation transporter;protein_id=TMR48238.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 45488 45621 . + . ID=gene-E3V84_01735;Name=E3V84_01735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01735;pseudo=true SOQE01000012.1 Protein Homology CDS 45488 45621 . + 0 ID=cds-E3V84_01735;Parent=gene-E3V84_01735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_01735;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 45712 46170 . - . ID=gene-E3V84_01740;Name=E3V84_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01740 SOQE01000012.1 Protein Homology CDS 45712 46170 . - 0 ID=cds-TMR48239.1;Parent=gene-E3V84_01740;Dbxref=NCBI_GP:TMR48239.1;Name=TMR48239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357752.1;locus_tag=E3V84_01740;product=DUF3021 domain-containing protein;protein_id=TMR48239.1;transl_table=11 SOQE01000012.1 Genbank gene 46167 46607 . - . ID=gene-E3V84_01745;Name=E3V84_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01745 SOQE01000012.1 Protein Homology CDS 46167 46607 . - 0 ID=cds-TMR48240.1;Parent=gene-E3V84_01745;Dbxref=NCBI_GP:TMR48240.1;Name=TMR48240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447029.1;locus_tag=E3V84_01745;product=response regulator transcription factor;protein_id=TMR48240.1;transl_table=11 SOQE01000012.1 Genbank gene 46697 46792 . + . ID=gene-E3V84_01750;Name=E3V84_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01750 SOQE01000012.1 Protein Homology CDS 46697 46792 . + 0 ID=cds-TMR48241.1;Parent=gene-E3V84_01750;Dbxref=NCBI_GP:TMR48241.1;Name=TMR48241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447028.1;locus_tag=E3V84_01750;product=hypothetical protein;protein_id=TMR48241.1;transl_table=11 SOQE01000012.1 Genbank gene 46813 48762 . + . ID=gene-E3V84_01755;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=E3V84_01755 SOQE01000012.1 Protein Homology CDS 46813 48762 . + 0 ID=cds-TMR48242.1;Parent=gene-E3V84_01755;Dbxref=NCBI_GP:TMR48242.1;Name=TMR48242.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357754.1;locus_tag=E3V84_01755;product=DNA mismatch repair endonuclease MutL;protein_id=TMR48242.1;transl_table=11 SOQE01000012.1 Genbank gene 49087 49554 . - . ID=gene-E3V84_01760;Name=E3V84_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01760 SOQE01000012.1 Protein Homology CDS 49087 49554 . - 0 ID=cds-TMR48243.1;Parent=gene-E3V84_01760;Dbxref=NCBI_GP:TMR48243.1;Name=TMR48243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357755.1;locus_tag=E3V84_01760;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TMR48243.1;transl_table=11 SOQE01000012.1 Genbank gene 49555 50760 . - . ID=gene-E3V84_01765;Name=E3V84_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01765 SOQE01000012.1 Protein Homology CDS 49555 50760 . - 0 ID=cds-TMR48244.1;Parent=gene-E3V84_01765;Dbxref=NCBI_GP:TMR48244.1;Name=TMR48244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357756.1;locus_tag=E3V84_01765;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=TMR48244.1;transl_table=11 SOQE01000012.1 Genbank gene 50780 51415 . - . ID=gene-E3V84_01770;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=E3V84_01770 SOQE01000012.1 Protein Homology CDS 50780 51415 . - 0 ID=cds-TMR48245.1;Parent=gene-E3V84_01770;Dbxref=NCBI_GP:TMR48245.1;Name=TMR48245.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357757.1;locus_tag=E3V84_01770;product=riboflavin synthase;protein_id=TMR48245.1;transl_table=11 SOQE01000012.1 Genbank gene 51400 52500 . - . ID=gene-E3V84_01775;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=E3V84_01775 SOQE01000012.1 Protein Homology CDS 51400 52500 . - 0 ID=cds-TMR48246.1;Parent=gene-E3V84_01775;Dbxref=NCBI_GP:TMR48246.1;Name=TMR48246.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357758.1;locus_tag=E3V84_01775;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=TMR48246.1;transl_table=11 SOQE01000012.1 cmsearch riboswitch 52635 52749 . - . ID=id-SOQE01000012.1:52635..52749;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000012.1 Genbank gene 52906 53499 . + . ID=gene-E3V84_01780;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=E3V84_01780 SOQE01000012.1 Protein Homology CDS 52906 53499 . + 0 ID=cds-TMR48247.1;Parent=gene-E3V84_01780;Dbxref=NCBI_GP:TMR48247.1;Name=TMR48247.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357759.1;locus_tag=E3V84_01780;product=Holliday junction branch migration protein RuvA;protein_id=TMR48247.1;transl_table=11 SOQE01000012.1 Genbank gene 53509 54072 . + . ID=gene-E3V84_01785;Name=E3V84_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01785 SOQE01000012.1 Protein Homology CDS 53509 54072 . + 0 ID=cds-TMR48248.1;Parent=gene-E3V84_01785;Dbxref=NCBI_GP:TMR48248.1;Name=TMR48248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357760.1;locus_tag=E3V84_01785;product=DNA-3-methyladenine glycosylase I;protein_id=TMR48248.1;transl_table=11 SOQE01000012.1 Genbank gene 54069 54746 . + . ID=gene-E3V84_01790;Name=E3V84_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01790 SOQE01000012.1 Protein Homology CDS 54069 54746 . + 0 ID=cds-TMR48249.1;Parent=gene-E3V84_01790;Dbxref=NCBI_GP:TMR48249.1;Name=TMR48249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357761.1;locus_tag=E3V84_01790;product=CPBP family intramembrane metalloprotease;protein_id=TMR48249.1;transl_table=11 SOQE01000012.1 Genbank gene 54901 55932 . - . ID=gene-E3V84_01795;Name=E3V84_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01795 SOQE01000012.1 Protein Homology CDS 54901 55932 . - 0 ID=cds-TMR48250.1;Parent=gene-E3V84_01795;Dbxref=NCBI_GP:TMR48250.1;Name=TMR48250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357762.1;locus_tag=E3V84_01795;product=LD-carboxypeptidase;protein_id=TMR48250.1;transl_table=11 SOQE01000012.1 Genbank gene 55991 56119 . + . ID=gene-E3V84_01800;Name=E3V84_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01800 SOQE01000012.1 Protein Homology CDS 55991 56119 . + 0 ID=cds-TMR48251.1;Parent=gene-E3V84_01800;Dbxref=NCBI_GP:TMR48251.1;Name=TMR48251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_01800;product=DNA alkylation repair protein;protein_id=TMR48251.1;transl_table=11 SOQE01000012.1 Genbank gene 56110 56793 . - . ID=gene-E3V84_01805;Name=E3V84_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01805 SOQE01000012.1 Protein Homology CDS 56110 56793 . - 0 ID=cds-TMR48252.1;Parent=gene-E3V84_01805;Dbxref=NCBI_GP:TMR48252.1;Name=TMR48252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078028.1;locus_tag=E3V84_01805;product=DUF1129 domain-containing protein;protein_id=TMR48252.1;transl_table=11 SOQE01000012.1 Genbank gene 56805 57749 . - . ID=gene-E3V84_01810;Name=E3V84_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01810 SOQE01000012.1 Protein Homology CDS 56805 57749 . - 0 ID=cds-TMR48253.1;Parent=gene-E3V84_01810;Dbxref=NCBI_GP:TMR48253.1;Name=TMR48253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357764.1;locus_tag=E3V84_01810;product=magnesium transporter CorA family protein;protein_id=TMR48253.1;transl_table=11 SOQE01000012.1 Genbank gene 57881 60712 . + . ID=gene-E3V84_01815;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=E3V84_01815 SOQE01000012.1 Protein Homology CDS 57881 60712 . + 0 ID=cds-TMR48254.1;Parent=gene-E3V84_01815;Dbxref=NCBI_GP:TMR48254.1;Name=TMR48254.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357765.1;locus_tag=E3V84_01815;product=excinuclease ABC subunit UvrA;protein_id=TMR48254.1;transl_table=11 SOQE01000012.1 Genbank gene 60705 61766 . + . ID=gene-E3V84_01820;Name=E3V84_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01820 SOQE01000012.1 Protein Homology CDS 60705 61766 . + 0 ID=cds-TMR48255.1;Parent=gene-E3V84_01820;Dbxref=NCBI_GP:TMR48255.1;Name=TMR48255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447020.1;locus_tag=E3V84_01820;product=aminopeptidase P family protein;protein_id=TMR48255.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 61771 61862 . + . ID=gene-E3V84_01825;Name=E3V84_01825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01825;pseudo=true SOQE01000012.1 Protein Homology CDS 61771 61862 . + 0 ID=cds-E3V84_01825;Parent=gene-E3V84_01825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808829.1;locus_tag=E3V84_01825;product=excinuclease ABC subunit A;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 61897 62295 . + . ID=gene-E3V84_01830;Name=E3V84_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01830 SOQE01000012.1 Protein Homology CDS 61897 62295 . + 0 ID=cds-TMR48256.1;Parent=gene-E3V84_01830;Dbxref=NCBI_GP:TMR48256.1;Name=TMR48256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357767.1;locus_tag=E3V84_01830;product=transcriptional regulator Spx;protein_id=TMR48256.1;transl_table=11 SOQE01000012.1 Genbank gene 62361 62930 . + . ID=gene-E3V84_01835;Name=E3V84_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01835 SOQE01000012.1 Protein Homology CDS 62361 62930 . + 0 ID=cds-TMR48257.1;Parent=gene-E3V84_01835;Dbxref=NCBI_GP:TMR48257.1;Name=TMR48257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447017.1;locus_tag=E3V84_01835;product=transcriptional regulator;protein_id=TMR48257.1;transl_table=11 SOQE01000012.1 Genbank gene 63017 63283 . + . ID=gene-E3V84_01840;Name=E3V84_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01840 SOQE01000012.1 Protein Homology CDS 63017 63283 . + 0 ID=cds-TMR48258.1;Parent=gene-E3V84_01840;Dbxref=NCBI_GP:TMR48258.1;Name=TMR48258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357769.1;locus_tag=E3V84_01840;product=IreB family regulatory phosphoprotein;protein_id=TMR48258.1;transl_table=11 SOQE01000012.1 Genbank gene 63287 63706 . + . ID=gene-E3V84_01845;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=E3V84_01845 SOQE01000012.1 Protein Homology CDS 63287 63706 . + 0 ID=cds-TMR48259.1;Parent=gene-E3V84_01845;Dbxref=NCBI_GP:TMR48259.1;Name=TMR48259.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357770.1;locus_tag=E3V84_01845;product=Holliday junction resolvase RuvX;protein_id=TMR48259.1;transl_table=11 SOQE01000012.1 Genbank gene 63722 64027 . + . ID=gene-E3V84_01850;Name=E3V84_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01850 SOQE01000012.1 Protein Homology CDS 63722 64027 . + 0 ID=cds-TMR48260.1;Parent=gene-E3V84_01850;Dbxref=NCBI_GP:TMR48260.1;Name=TMR48260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357771.1;locus_tag=E3V84_01850;product=DUF1292 domain-containing protein;protein_id=TMR48260.1;transl_table=11 SOQE01000012.1 Genbank gene 64282 65532 . + . ID=gene-E3V84_01855;Name=E3V84_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01855 SOQE01000012.1 Protein Homology CDS 64282 65532 . + 0 ID=cds-TMR48261.1;Parent=gene-E3V84_01855;Dbxref=NCBI_GP:TMR48261.1;Name=TMR48261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447013.1;locus_tag=E3V84_01855;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMR48261.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 65616 66080 . + . ID=gene-E3V84_01860;Name=E3V84_01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01860;pseudo=true SOQE01000012.1 Protein Homology CDS 65616 66080 . + 0 ID=cds-E3V84_01860;Parent=gene-E3V84_01860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447012.1;locus_tag=E3V84_01860;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 66188 67720 . + . ID=gene-E3V84_01865;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=E3V84_01865 SOQE01000012.1 Protein Homology CDS 66188 67720 . + 0 ID=cds-TMR48262.1;Parent=gene-E3V84_01865;Dbxref=NCBI_GP:TMR48262.1;Name=TMR48262.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357774.1;locus_tag=E3V84_01865;product=cardiolipin synthase;protein_id=TMR48262.1;transl_table=11 SOQE01000012.1 Genbank gene 67796 67939 . + . ID=gene-E3V84_01870;Name=E3V84_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01870 SOQE01000012.1 Protein Homology CDS 67796 67939 . + 0 ID=cds-TMR48263.1;Parent=gene-E3V84_01870;Dbxref=NCBI_GP:TMR48263.1;Name=TMR48263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447010.1;locus_tag=E3V84_01870;product=hypothetical protein;protein_id=TMR48263.1;transl_table=11 SOQE01000012.1 Genbank gene 67976 69514 . + . ID=gene-E3V84_01875;Name=E3V84_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01875 SOQE01000012.1 Protein Homology CDS 67976 69514 . + 0 ID=cds-TMR48264.1;Parent=gene-E3V84_01875;Dbxref=NCBI_GP:TMR48264.1;Name=TMR48264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447009.1;locus_tag=E3V84_01875;product=damage-inducible protein CinA;protein_id=TMR48264.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 69628 71841 . + . ID=gene-E3V84_01880;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=pseudogene;locus_tag=E3V84_01880;pseudo=true SOQE01000012.1 Protein Homology CDS 69628 71841 . + 0 ID=cds-E3V84_01880;Parent=gene-E3V84_01880;Note=internal stop;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447008.1;locus_tag=E3V84_01880;product=anaerobic ribonucleoside-triphosphate reductase;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 71853 71993 . + . ID=gene-E3V84_01885;Name=E3V84_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01885 SOQE01000012.1 Protein Homology CDS 71853 71993 . + 0 ID=cds-TMR48265.1;Parent=gene-E3V84_01885;Dbxref=NCBI_GP:TMR48265.1;Name=TMR48265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447007.1;locus_tag=E3V84_01885;product=hypothetical protein;protein_id=TMR48265.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 72033 72110 . - . ID=gene-E3V84_01890;Name=E3V84_01890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_01890;pseudo=true SOQE01000012.1 Protein Homology CDS 72033 72110 . - 0 ID=cds-E3V84_01890;Parent=gene-E3V84_01890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_01890;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 72143 72649 . + . ID=gene-E3V84_01895;Name=E3V84_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01895 SOQE01000012.1 Protein Homology CDS 72143 72649 . + 0 ID=cds-TMR48266.1;Parent=gene-E3V84_01895;Dbxref=NCBI_GP:TMR48266.1;Name=TMR48266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447006.1;locus_tag=E3V84_01895;product=GNAT family N-acetyltransferase;protein_id=TMR48266.1;transl_table=11 SOQE01000012.1 Genbank gene 72642 73232 . + . ID=gene-E3V84_01900;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=E3V84_01900 SOQE01000012.1 Protein Homology CDS 72642 73232 . + 0 ID=cds-TMR48267.1;Parent=gene-E3V84_01900;Dbxref=NCBI_GP:TMR48267.1;Name=TMR48267.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357779.1;locus_tag=E3V84_01900;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=TMR48267.1;transl_table=11 SOQE01000012.1 Genbank gene 73229 73855 . + . ID=gene-E3V84_01905;Name=E3V84_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01905 SOQE01000012.1 Protein Homology CDS 73229 73855 . + 0 ID=cds-TMR48268.1;Parent=gene-E3V84_01905;Dbxref=NCBI_GP:TMR48268.1;Name=TMR48268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447004.1;locus_tag=E3V84_01905;product=phosphoribulokinase;protein_id=TMR48268.1;transl_table=11 SOQE01000012.1 Genbank gene 74099 74407 . + . ID=gene-E3V84_01910;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=E3V84_01910 SOQE01000012.1 Protein Homology CDS 74099 74407 . + 0 ID=cds-TMR48269.1;Parent=gene-E3V84_01910;Dbxref=NCBI_GP:TMR48269.1;Name=TMR48269.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=E3V84_01910;product=30S ribosomal protein S10;protein_id=TMR48269.1;transl_table=11 SOQE01000012.1 Genbank gene 74624 75250 . + . ID=gene-E3V84_01915;Name=E3V84_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01915 SOQE01000012.1 Protein Homology CDS 74624 75250 . + 0 ID=cds-TMR48270.1;Parent=gene-E3V84_01915;Dbxref=NCBI_GP:TMR48270.1;Name=TMR48270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=E3V84_01915;product=50S ribosomal protein L3;protein_id=TMR48270.1;transl_table=11 SOQE01000012.1 Genbank gene 75275 75898 . + . ID=gene-E3V84_01920;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=E3V84_01920 SOQE01000012.1 Protein Homology CDS 75275 75898 . + 0 ID=cds-TMR48271.1;Parent=gene-E3V84_01920;Dbxref=NCBI_GP:TMR48271.1;Name=TMR48271.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=E3V84_01920;product=50S ribosomal protein L4;protein_id=TMR48271.1;transl_table=11 SOQE01000012.1 Genbank gene 75898 76194 . + . ID=gene-E3V84_01925;Name=E3V84_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01925 SOQE01000012.1 Protein Homology CDS 75898 76194 . + 0 ID=cds-TMR48272.1;Parent=gene-E3V84_01925;Dbxref=NCBI_GP:TMR48272.1;Name=TMR48272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=E3V84_01925;product=50S ribosomal protein L23;protein_id=TMR48272.1;transl_table=11 SOQE01000012.1 Genbank gene 76212 77045 . + . ID=gene-E3V84_01930;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=E3V84_01930 SOQE01000012.1 Protein Homology CDS 76212 77045 . + 0 ID=cds-TMR48273.1;Parent=gene-E3V84_01930;Dbxref=NCBI_GP:TMR48273.1;Name=TMR48273.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=E3V84_01930;product=50S ribosomal protein L2;protein_id=TMR48273.1;transl_table=11 SOQE01000012.1 Genbank gene 77149 77430 . + . ID=gene-E3V84_01935;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=E3V84_01935 SOQE01000012.1 Protein Homology CDS 77149 77430 . + 0 ID=cds-TMR48274.1;Parent=gene-E3V84_01935;Dbxref=NCBI_GP:TMR48274.1;Name=TMR48274.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357786.1;locus_tag=E3V84_01935;product=30S ribosomal protein S19;protein_id=TMR48274.1;transl_table=11 SOQE01000012.1 Genbank gene 77442 77786 . + . ID=gene-E3V84_01940;Name=E3V84_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01940 SOQE01000012.1 Protein Homology CDS 77442 77786 . + 0 ID=cds-TMR48275.1;Parent=gene-E3V84_01940;Dbxref=NCBI_GP:TMR48275.1;Name=TMR48275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=E3V84_01940;product=50S ribosomal protein L22;protein_id=TMR48275.1;transl_table=11 SOQE01000012.1 Genbank gene 77799 78452 . + . ID=gene-E3V84_01945;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=E3V84_01945 SOQE01000012.1 Protein Homology CDS 77799 78452 . + 0 ID=cds-TMR48276.1;Parent=gene-E3V84_01945;Dbxref=NCBI_GP:TMR48276.1;Name=TMR48276.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=E3V84_01945;product=30S ribosomal protein S3;protein_id=TMR48276.1;transl_table=11 SOQE01000012.1 Genbank gene 78456 78869 . + . ID=gene-E3V84_01950;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=E3V84_01950 SOQE01000012.1 Protein Homology CDS 78456 78869 . + 0 ID=cds-TMR48277.1;Parent=gene-E3V84_01950;Dbxref=NCBI_GP:TMR48277.1;Name=TMR48277.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=E3V84_01950;product=50S ribosomal protein L16;protein_id=TMR48277.1;transl_table=11 SOQE01000012.1 Genbank gene 78879 79085 . + . ID=gene-E3V84_01955;Name=E3V84_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01955 SOQE01000012.1 Protein Homology CDS 78879 79085 . + 0 ID=cds-TMR48278.1;Parent=gene-E3V84_01955;Dbxref=NCBI_GP:TMR48278.1;Name=TMR48278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357791.1;locus_tag=E3V84_01955;product=50S ribosomal protein L29;protein_id=TMR48278.1;transl_table=11 SOQE01000012.1 Genbank gene 79110 79370 . + . ID=gene-E3V84_01960;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=E3V84_01960 SOQE01000012.1 Protein Homology CDS 79110 79370 . + 0 ID=cds-TMR48279.1;Parent=gene-E3V84_01960;Dbxref=NCBI_GP:TMR48279.1;Name=TMR48279.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=E3V84_01960;product=30S ribosomal protein S17;protein_id=TMR48279.1;transl_table=11 SOQE01000012.1 Genbank gene 79396 79764 . + . ID=gene-E3V84_01965;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=E3V84_01965 SOQE01000012.1 Protein Homology CDS 79396 79764 . + 0 ID=cds-TMR48280.1;Parent=gene-E3V84_01965;Dbxref=NCBI_GP:TMR48280.1;Name=TMR48280.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357793.1;locus_tag=E3V84_01965;product=50S ribosomal protein L14;protein_id=TMR48280.1;transl_table=11 SOQE01000012.1 Genbank gene 79947 80252 . + . ID=gene-E3V84_01970;Name=E3V84_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01970 SOQE01000012.1 Protein Homology CDS 79947 80252 . + 0 ID=cds-TMR48281.1;Parent=gene-E3V84_01970;Dbxref=NCBI_GP:TMR48281.1;Name=TMR48281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=E3V84_01970;product=50S ribosomal protein L24;protein_id=TMR48281.1;transl_table=11 SOQE01000012.1 Genbank gene 80276 80818 . + . ID=gene-E3V84_01975;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=E3V84_01975 SOQE01000012.1 Protein Homology CDS 80276 80818 . + 0 ID=cds-TMR48282.1;Parent=gene-E3V84_01975;Dbxref=NCBI_GP:TMR48282.1;Name=TMR48282.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=E3V84_01975;product=50S ribosomal protein L5;protein_id=TMR48282.1;transl_table=11 SOQE01000012.1 Genbank gene 80836 81105 . + . ID=gene-E3V84_01980;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=E3V84_01980 SOQE01000012.1 Protein Homology CDS 80836 81105 . + 0 ID=cds-TMR48283.1;Parent=gene-E3V84_01980;Dbxref=NCBI_GP:TMR48283.1;Name=TMR48283.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357796.1;locus_tag=E3V84_01980;product=30S ribosomal protein S14;protein_id=TMR48283.1;transl_table=11 SOQE01000012.1 Genbank gene 81391 81789 . + . ID=gene-E3V84_01985;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=E3V84_01985 SOQE01000012.1 Protein Homology CDS 81391 81789 . + 0 ID=cds-TMR48284.1;Parent=gene-E3V84_01985;Dbxref=NCBI_GP:TMR48284.1;Name=TMR48284.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=E3V84_01985;product=30S ribosomal protein S8;protein_id=TMR48284.1;transl_table=11 SOQE01000012.1 Genbank gene 81977 82513 . + . ID=gene-E3V84_01990;Name=E3V84_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01990 SOQE01000012.1 Protein Homology CDS 81977 82513 . + 0 ID=cds-TMR48285.1;Parent=gene-E3V84_01990;Dbxref=NCBI_GP:TMR48285.1;Name=TMR48285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=E3V84_01990;product=50S ribosomal protein L6;protein_id=TMR48285.1;transl_table=11 SOQE01000012.1 Genbank gene 82597 82953 . + . ID=gene-E3V84_01995;Name=E3V84_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_01995 SOQE01000012.1 Protein Homology CDS 82597 82953 . + 0 ID=cds-TMR48286.1;Parent=gene-E3V84_01995;Dbxref=NCBI_GP:TMR48286.1;Name=TMR48286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357799.1;locus_tag=E3V84_01995;product=50S ribosomal protein L18;protein_id=TMR48286.1;transl_table=11 SOQE01000012.1 Genbank gene 82971 83465 . + . ID=gene-E3V84_02000;Name=E3V84_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02000 SOQE01000012.1 Protein Homology CDS 82971 83465 . + 0 ID=cds-TMR48287.1;Parent=gene-E3V84_02000;Dbxref=NCBI_GP:TMR48287.1;Name=TMR48287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=E3V84_02000;product=30S ribosomal protein S5;protein_id=TMR48287.1;transl_table=11 SOQE01000012.1 Genbank gene 83437 83661 . + . ID=gene-E3V84_02005;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=E3V84_02005 SOQE01000012.1 Protein Homology CDS 83437 83661 . + 0 ID=cds-TMR48288.1;Parent=gene-E3V84_02005;Dbxref=NCBI_GP:TMR48288.1;Name=TMR48288.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386624.1;locus_tag=E3V84_02005;product=50S ribosomal protein L30;protein_id=TMR48288.1;transl_table=11 SOQE01000012.1 Genbank gene 83806 84246 . + . ID=gene-E3V84_02010;Name=E3V84_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02010 SOQE01000012.1 Protein Homology CDS 83806 84246 . + 0 ID=cds-TMR48289.1;Parent=gene-E3V84_02010;Dbxref=NCBI_GP:TMR48289.1;Name=TMR48289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357802.1;locus_tag=E3V84_02010;product=50S ribosomal protein L15;protein_id=TMR48289.1;transl_table=11 SOQE01000012.1 Genbank gene 84259 85569 . + . ID=gene-E3V84_02015;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=E3V84_02015 SOQE01000012.1 Protein Homology CDS 84259 85569 . + 0 ID=cds-TMR48290.1;Parent=gene-E3V84_02015;Dbxref=NCBI_GP:TMR48290.1;Name=TMR48290.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357803.1;locus_tag=E3V84_02015;product=preprotein translocase subunit SecY;protein_id=TMR48290.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 85579 85669 . + . ID=gene-E3V84_02020;Name=E3V84_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02020;pseudo=true SOQE01000012.1 Protein Homology CDS 85579 85669 . + 0 ID=cds-E3V84_02020;Parent=gene-E3V84_02020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_02020;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 85835 86473 . + . ID=gene-E3V84_02025;Name=E3V84_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02025 SOQE01000012.1 Protein Homology CDS 85835 86473 . + 0 ID=cds-TMR48291.1;Parent=gene-E3V84_02025;Dbxref=NCBI_GP:TMR48291.1;Name=TMR48291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357804.1;locus_tag=E3V84_02025;product=adenylate kinase;protein_id=TMR48291.1;transl_table=11 SOQE01000012.1 Genbank gene 86590 86808 . + . ID=gene-E3V84_02030;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=E3V84_02030 SOQE01000012.1 Protein Homology CDS 86590 86808 . + 0 ID=cds-TMR48292.1;Parent=gene-E3V84_02030;Dbxref=NCBI_GP:TMR48292.1;Name=TMR48292.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001034141.1;locus_tag=E3V84_02030;product=translation initiation factor IF-1;protein_id=TMR48292.1;transl_table=11 SOQE01000012.1 Genbank gene 86833 86949 . + . ID=gene-E3V84_02035;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=E3V84_02035 SOQE01000012.1 Protein Homology CDS 86833 86949 . + 0 ID=cds-TMR48293.1;Parent=gene-E3V84_02035;Dbxref=NCBI_GP:TMR48293.1;Name=TMR48293.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=E3V84_02035;product=50S ribosomal protein L36;protein_id=TMR48293.1;transl_table=11 SOQE01000012.1 Genbank gene 86967 87332 . + . ID=gene-E3V84_02040;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=E3V84_02040 SOQE01000012.1 Protein Homology CDS 86967 87332 . + 0 ID=cds-TMR48294.1;Parent=gene-E3V84_02040;Dbxref=NCBI_GP:TMR48294.1;Name=TMR48294.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=E3V84_02040;product=30S ribosomal protein S13;protein_id=TMR48294.1;transl_table=11 SOQE01000012.1 Genbank gene 87350 87733 . + . ID=gene-E3V84_02045;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=E3V84_02045 SOQE01000012.1 Protein Homology CDS 87350 87733 . + 0 ID=cds-TMR48295.1;Parent=gene-E3V84_02045;Dbxref=NCBI_GP:TMR48295.1;Name=TMR48295.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374461.1;locus_tag=E3V84_02045;product=30S ribosomal protein S11;protein_id=TMR48295.1;transl_table=11 SOQE01000012.1 Genbank gene 87776 88711 . + . ID=gene-E3V84_02050;Name=E3V84_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02050 SOQE01000012.1 Protein Homology CDS 87776 88711 . + 0 ID=cds-TMR48296.1;Parent=gene-E3V84_02050;Dbxref=NCBI_GP:TMR48296.1;Name=TMR48296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=E3V84_02050;product=DNA-directed RNA polymerase subunit alpha;protein_id=TMR48296.1;transl_table=11 SOQE01000012.1 Genbank gene 88723 89109 . + . ID=gene-E3V84_02055;Name=E3V84_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02055 SOQE01000012.1 Protein Homology CDS 88723 89109 . + 0 ID=cds-TMR48297.1;Parent=gene-E3V84_02055;Dbxref=NCBI_GP:TMR48297.1;Name=TMR48297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=E3V84_02055;product=50S ribosomal protein L17;protein_id=TMR48297.1;transl_table=11 SOQE01000012.1 Genbank gene 89374 89640 . + . ID=gene-E3V84_02060;Name=E3V84_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02060 SOQE01000012.1 Protein Homology CDS 89374 89640 . + 0 ID=cds-TMR48298.1;Parent=gene-E3V84_02060;Dbxref=NCBI_GP:TMR48298.1;Name=TMR48298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357811.2;locus_tag=E3V84_02060;product=ACT domain-containing protein;protein_id=TMR48298.1;transl_table=11 SOQE01000012.1 Genbank gene 89650 90987 . + . ID=gene-E3V84_02065;Name=E3V84_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02065 SOQE01000012.1 Protein Homology CDS 89650 90987 . + 0 ID=cds-TMR48299.1;Parent=gene-E3V84_02065;Dbxref=NCBI_GP:TMR48299.1;Name=TMR48299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=E3V84_02065;product=PFL family protein;protein_id=TMR48299.1;transl_table=11 SOQE01000012.1 Genbank gene 91005 92471 . + . ID=gene-E3V84_02070;Name=E3V84_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02070 SOQE01000012.1 Protein Homology CDS 91005 92471 . + 0 ID=cds-TMR48300.1;Parent=gene-E3V84_02070;Dbxref=NCBI_GP:TMR48300.1;Name=TMR48300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711932.1;locus_tag=E3V84_02070;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR48300.1;transl_table=11 SOQE01000012.1 Genbank gene 92704 93396 . + . ID=gene-E3V84_02075;Name=E3V84_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02075 SOQE01000012.1 Protein Homology CDS 92704 93396 . + 0 ID=cds-TMR48301.1;Parent=gene-E3V84_02075;Dbxref=NCBI_GP:TMR48301.1;Name=TMR48301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241534.1;locus_tag=E3V84_02075;product=histidine phosphatase family protein;protein_id=TMR48301.1;transl_table=11 SOQE01000012.1 Genbank gene 93393 93584 . - . ID=gene-E3V84_02080;Name=E3V84_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02080 SOQE01000012.1 Protein Homology CDS 93393 93584 . - 0 ID=cds-TMR48302.1;Parent=gene-E3V84_02080;Dbxref=NCBI_GP:TMR48302.1;Name=TMR48302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_02080;product=hypothetical protein;protein_id=TMR48302.1;transl_table=11 SOQE01000012.1 Genbank gene 93696 95354 . - . ID=gene-E3V84_02085;Name=E3V84_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02085 SOQE01000012.1 Protein Homology CDS 93696 95354 . - 0 ID=cds-TMR48303.1;Parent=gene-E3V84_02085;Dbxref=NCBI_GP:TMR48303.1;Name=TMR48303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100973.1;locus_tag=E3V84_02085;product=iron ABC transporter permease;protein_id=TMR48303.1;transl_table=11 SOQE01000012.1 Genbank gene 95344 96435 . - . ID=gene-E3V84_02090;Name=E3V84_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02090 SOQE01000012.1 Protein Homology CDS 95344 96435 . - 0 ID=cds-TMR48304.1;Parent=gene-E3V84_02090;Dbxref=NCBI_GP:TMR48304.1;Name=TMR48304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357816.1;locus_tag=E3V84_02090;product=ABC transporter ATP-binding protein;protein_id=TMR48304.1;transl_table=11 SOQE01000012.1 Genbank gene 96448 97494 . - . ID=gene-E3V84_02095;Name=E3V84_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02095 SOQE01000012.1 Protein Homology CDS 96448 97494 . - 0 ID=cds-TMR48305.1;Parent=gene-E3V84_02095;Dbxref=NCBI_GP:TMR48305.1;Name=TMR48305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731174.1;locus_tag=E3V84_02095;product=extracellular solute-binding protein;protein_id=TMR48305.1;transl_table=11 SOQE01000012.1 Genbank gene 97606 98379 . - . ID=gene-E3V84_02100;Name=E3V84_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02100 SOQE01000012.1 Protein Homology CDS 97606 98379 . - 0 ID=cds-TMR48306.1;Parent=gene-E3V84_02100;Dbxref=NCBI_GP:TMR48306.1;Name=TMR48306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475411.1;locus_tag=E3V84_02100;product=response regulator;protein_id=TMR48306.1;transl_table=11 SOQE01000012.1 Genbank gene 98372 100021 . - . ID=gene-E3V84_02105;Name=E3V84_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02105 SOQE01000012.1 Protein Homology CDS 98372 100021 . - 0 ID=cds-TMR48307.1;Parent=gene-E3V84_02105;Dbxref=NCBI_GP:TMR48307.1;Name=TMR48307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019718.1;locus_tag=E3V84_02105;product=sensor histidine kinase;protein_id=TMR48307.1;transl_table=11 SOQE01000012.1 Genbank gene 100169 102670 . + . ID=gene-E3V84_02110;Name=E3V84_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02110 SOQE01000012.1 Protein Homology CDS 100169 102670 . + 0 ID=cds-TMR48308.1;Parent=gene-E3V84_02110;Dbxref=NCBI_GP:TMR48308.1;Name=TMR48308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357829.1;locus_tag=E3V84_02110;product=leucine--tRNA ligase;protein_id=TMR48308.1;transl_table=11 SOQE01000012.1 Genbank gene 102712 103554 . + . ID=gene-E3V84_02115;Name=E3V84_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02115 SOQE01000012.1 Protein Homology CDS 102712 103554 . + 0 ID=cds-TMR48309.1;Parent=gene-E3V84_02115;Dbxref=NCBI_GP:TMR48309.1;Name=TMR48309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081168.1;locus_tag=E3V84_02115;product=hypothetical protein;protein_id=TMR48309.1;transl_table=11 SOQE01000012.1 Genbank gene 103610 104305 . + . ID=gene-E3V84_02120;Name=E3V84_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02120 SOQE01000012.1 Protein Homology CDS 103610 104305 . + 0 ID=cds-TMR48310.1;Parent=gene-E3V84_02120;Dbxref=NCBI_GP:TMR48310.1;Name=TMR48310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357830.1;locus_tag=E3V84_02120;product=N-acetyltransferase;protein_id=TMR48310.1;transl_table=11 SOQE01000012.1 Genbank gene 104317 104733 . + . ID=gene-E3V84_02125;Name=E3V84_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02125 SOQE01000012.1 Protein Homology CDS 104317 104733 . + 0 ID=cds-TMR48311.1;Parent=gene-E3V84_02125;Dbxref=NCBI_GP:TMR48311.1;Name=TMR48311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357831.1;locus_tag=E3V84_02125;product=N-acetyltransferase;protein_id=TMR48311.1;transl_table=11 SOQE01000012.1 Genbank gene 105563 105655 . - . ID=gene-E3V84_02130;Name=E3V84_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02130 SOQE01000012.1 Protein Homology CDS 105563 105655 . - 0 ID=cds-TMR48312.1;Parent=gene-E3V84_02130;Dbxref=NCBI_GP:TMR48312.1;Name=TMR48312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=E3V84_02130;product=type I toxin-antitoxin system Fst family toxin;protein_id=TMR48312.1;transl_table=11 SOQE01000012.1 Genbank gene 105889 106245 . + . ID=gene-E3V84_02135;Name=E3V84_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02135 SOQE01000012.1 Protein Homology CDS 105889 106245 . + 0 ID=cds-TMR48313.1;Parent=gene-E3V84_02135;Dbxref=NCBI_GP:TMR48313.1;Name=TMR48313.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13592.4;locus_tag=E3V84_02135;product=hypothetical protein;protein_id=TMR48313.1;transl_table=11 SOQE01000012.1 Genbank gene 106442 107095 . + . ID=gene-E3V84_02140;Name=E3V84_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02140 SOQE01000012.1 Protein Homology CDS 106442 107095 . + 0 ID=cds-TMR48314.1;Parent=gene-E3V84_02140;Dbxref=NCBI_GP:TMR48314.1;Name=TMR48314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074692.1;locus_tag=E3V84_02140;product=DUF4352 domain-containing protein;protein_id=TMR48314.1;transl_table=11 SOQE01000012.1 Genbank gene 107692 107784 . - . ID=gene-E3V84_02145;Name=E3V84_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02145 SOQE01000012.1 Protein Homology CDS 107692 107784 . - 0 ID=cds-TMR48315.1;Parent=gene-E3V84_02145;Dbxref=NCBI_GP:TMR48315.1;Name=TMR48315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=E3V84_02145;product=type I toxin-antitoxin system Fst family toxin;protein_id=TMR48315.1;transl_table=11 SOQE01000012.1 Genbank gene 107917 108915 . + . ID=gene-E3V84_02150;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=E3V84_02150 SOQE01000012.1 Protein Homology CDS 107917 108915 . + 0 ID=cds-TMR48316.1;Parent=gene-E3V84_02150;Dbxref=NCBI_GP:TMR48316.1;Name=TMR48316.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357832.1;locus_tag=E3V84_02150;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TMR48316.1;transl_table=11 SOQE01000012.1 Genbank gene 108896 109468 . + . ID=gene-E3V84_02155;Name=E3V84_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02155 SOQE01000012.1 Protein Homology CDS 108896 109468 . + 0 ID=cds-TMR48317.1;Parent=gene-E3V84_02155;Dbxref=NCBI_GP:TMR48317.1;Name=TMR48317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357833.1;locus_tag=E3V84_02155;product=nucleotidyltransferase family protein;protein_id=TMR48317.1;transl_table=11 SOQE01000012.1 Genbank gene 109652 109771 . - . ID=gene-E3V84_02160;Name=E3V84_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02160 SOQE01000012.1 Protein Homology CDS 109652 109771 . - 0 ID=cds-TMR48356.1;Parent=gene-E3V84_02160;Dbxref=NCBI_GP:TMR48356.1;Name=TMR48356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_02160;product=DNA alkylation repair protein;protein_id=TMR48356.1;transl_table=11 SOQE01000012.1 Genbank gene 109814 110572 . + . ID=gene-E3V84_02165;Name=E3V84_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02165 SOQE01000012.1 Protein Homology CDS 109814 110572 . + 0 ID=cds-TMR48318.1;Parent=gene-E3V84_02165;Dbxref=NCBI_GP:TMR48318.1;Name=TMR48318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446955.1;locus_tag=E3V84_02165;product=isoprenyl transferase;protein_id=TMR48318.1;transl_table=11 SOQE01000012.1 Genbank gene 110581 111384 . + . ID=gene-E3V84_02170;Name=E3V84_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02170 SOQE01000012.1 Protein Homology CDS 110581 111384 . + 0 ID=cds-TMR48319.1;Parent=gene-E3V84_02170;Dbxref=NCBI_GP:TMR48319.1;Name=TMR48319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357835.1;locus_tag=E3V84_02170;product=phosphatidate cytidylyltransferase;protein_id=TMR48319.1;transl_table=11 SOQE01000012.1 Genbank gene 111406 112665 . + . ID=gene-E3V84_02175;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=E3V84_02175 SOQE01000012.1 Protein Homology CDS 111406 112665 . + 0 ID=cds-TMR48320.1;Parent=gene-E3V84_02175;Dbxref=NCBI_GP:TMR48320.1;Name=TMR48320.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357836.1;locus_tag=E3V84_02175;product=RIP metalloprotease RseP;protein_id=TMR48320.1;transl_table=11 SOQE01000012.1 Genbank gene 112678 114531 . + . ID=gene-E3V84_02180;Name=E3V84_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02180 SOQE01000012.1 Protein Homology CDS 112678 114531 . + 0 ID=cds-TMR48321.1;Parent=gene-E3V84_02180;Dbxref=NCBI_GP:TMR48321.1;Name=TMR48321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357837.1;locus_tag=E3V84_02180;product=proline--tRNA ligase;protein_id=TMR48321.1;transl_table=11 SOQE01000012.1 Genbank gene 114630 116009 . + . ID=gene-E3V84_02185;Name=E3V84_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02185 SOQE01000012.1 Protein Homology CDS 114630 116009 . + 0 ID=cds-TMR48322.1;Parent=gene-E3V84_02185;Dbxref=NCBI_GP:TMR48322.1;Name=TMR48322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357838.1;locus_tag=E3V84_02185;product=glycoside hydrolase family 1 protein;protein_id=TMR48322.1;transl_table=11 SOQE01000012.1 Genbank gene 116201 118009 . + . ID=gene-E3V84_02190;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=E3V84_02190 SOQE01000012.1 Protein Homology CDS 116201 118009 . + 0 ID=cds-TMR48323.1;Parent=gene-E3V84_02190;Dbxref=NCBI_GP:TMR48323.1;Name=TMR48323.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357839.1;locus_tag=E3V84_02190;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=TMR48323.1;transl_table=11 SOQE01000012.1 Genbank gene 118454 120223 . + . ID=gene-E3V84_02195;Name=E3V84_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02195 SOQE01000012.1 Protein Homology CDS 118454 120223 . + 0 ID=cds-TMR48324.1;Parent=gene-E3V84_02195;Dbxref=NCBI_GP:TMR48324.1;Name=TMR48324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357950.1;locus_tag=E3V84_02195;product=PTS mannitol transporter subunit IICBA;protein_id=TMR48324.1;transl_table=11 SOQE01000012.1 Genbank gene 120247 122202 . + . ID=gene-E3V84_02200;Name=E3V84_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02200 SOQE01000012.1 Protein Homology CDS 120247 122202 . + 0 ID=cds-TMR48325.1;Parent=gene-E3V84_02200;Dbxref=NCBI_GP:TMR48325.1;Name=TMR48325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357951.1;locus_tag=E3V84_02200;product=transcription antiterminator;protein_id=TMR48325.1;transl_table=11 SOQE01000012.1 Genbank gene 122204 122641 . + . ID=gene-E3V84_02205;Name=E3V84_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02205 SOQE01000012.1 Protein Homology CDS 122204 122641 . + 0 ID=cds-TMR48326.1;Parent=gene-E3V84_02205;Dbxref=NCBI_GP:TMR48326.1;Name=TMR48326.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357952.1;locus_tag=E3V84_02205;product=PTS mannitol transporter subunit IIA;protein_id=TMR48326.1;transl_table=11 SOQE01000012.1 Genbank gene 122703 123839 . + . ID=gene-E3V84_02210;Name=E3V84_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02210 SOQE01000012.1 Protein Homology CDS 122703 123839 . + 0 ID=cds-TMR48327.1;Parent=gene-E3V84_02210;Dbxref=NCBI_GP:TMR48327.1;Name=TMR48327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357953.1;locus_tag=E3V84_02210;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=TMR48327.1;transl_table=11 SOQE01000012.1 Genbank gene 124039 125088 . + . ID=gene-E3V84_02215;Name=E3V84_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02215 SOQE01000012.1 Protein Homology CDS 124039 125088 . + 0 ID=cds-TMR48328.1;Parent=gene-E3V84_02215;Dbxref=NCBI_GP:TMR48328.1;Name=TMR48328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446949.1;locus_tag=E3V84_02215;product=LLM class flavin-dependent oxidoreductase;protein_id=TMR48328.1;transl_table=11 SOQE01000012.1 Genbank gene 125309 126316 . + . ID=gene-E3V84_02220;Name=E3V84_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02220 SOQE01000012.1 Protein Homology CDS 125309 126316 . + 0 ID=cds-TMR48329.1;Parent=gene-E3V84_02220;Dbxref=NCBI_GP:TMR48329.1;Name=TMR48329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202170.1;locus_tag=E3V84_02220;product=uroporphyrinogen decarboxylase;protein_id=TMR48329.1;transl_table=11 SOQE01000012.1 Genbank gene 126326 126529 . + . ID=gene-E3V84_02225;Name=E3V84_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02225 SOQE01000012.1 Protein Homology CDS 126326 126529 . + 0 ID=cds-TMR48330.1;Parent=gene-E3V84_02225;Dbxref=NCBI_GP:TMR48330.1;Name=TMR48330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823549.1;locus_tag=E3V84_02225;product=hypothetical protein;protein_id=TMR48330.1;transl_table=11 SOQE01000012.1 Genbank gene 126532 127530 . + . ID=gene-E3V84_02230;Name=E3V84_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02230 SOQE01000012.1 Protein Homology CDS 126532 127530 . + 0 ID=cds-TMR48331.1;Parent=gene-E3V84_02230;Dbxref=NCBI_GP:TMR48331.1;Name=TMR48331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291549.1;locus_tag=E3V84_02230;product=uroporphyrinogen decarboxylase;protein_id=TMR48331.1;transl_table=11 SOQE01000012.1 Genbank gene 127542 128420 . + . ID=gene-E3V84_02235;Name=E3V84_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02235 SOQE01000012.1 Protein Homology CDS 127542 128420 . + 0 ID=cds-TMR48332.1;Parent=gene-E3V84_02235;Dbxref=NCBI_GP:TMR48332.1;Name=TMR48332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036020.1;locus_tag=E3V84_02235;product=transporter substrate-binding domain-containing protein;protein_id=TMR48332.1;transl_table=11 SOQE01000012.1 Genbank gene 128598 129290 . + . ID=gene-E3V84_02240;Name=E3V84_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02240 SOQE01000012.1 Protein Homology CDS 128598 129290 . + 0 ID=cds-TMR48333.1;Parent=gene-E3V84_02240;Dbxref=NCBI_GP:TMR48333.1;Name=TMR48333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036019.1;locus_tag=E3V84_02240;product=amino acid ABC transporter permease;protein_id=TMR48333.1;transl_table=11 SOQE01000012.1 Genbank gene 129294 130016 . + . ID=gene-E3V84_02245;Name=E3V84_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02245 SOQE01000012.1 Protein Homology CDS 129294 130016 . + 0 ID=cds-TMR48334.1;Parent=gene-E3V84_02245;Dbxref=NCBI_GP:TMR48334.1;Name=TMR48334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362517.1;locus_tag=E3V84_02245;product=amino acid ABC transporter permease;protein_id=TMR48334.1;transl_table=11 SOQE01000012.1 Genbank gene 130026 130790 . + . ID=gene-E3V84_02250;Name=E3V84_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02250 SOQE01000012.1 Protein Homology CDS 130026 130790 . + 0 ID=cds-TMR48335.1;Parent=gene-E3V84_02250;Dbxref=NCBI_GP:TMR48335.1;Name=TMR48335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036017.1;locus_tag=E3V84_02250;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR48335.1;transl_table=11 SOQE01000012.1 Genbank gene 130866 134726 . - . ID=gene-E3V84_02255;Name=spuA;gbkey=Gene;gene=spuA;gene_biotype=protein_coding;locus_tag=E3V84_02255 SOQE01000012.1 Protein Homology CDS 130866 134726 . - 0 ID=cds-TMR48336.1;Parent=gene-E3V84_02255;Dbxref=NCBI_GP:TMR48336.1;Name=TMR48336.1;gbkey=CDS;gene=spuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357841.1;locus_tag=E3V84_02255;product=LPXTG-anchored pullulanase SpuA;protein_id=TMR48336.1;transl_table=11 SOQE01000012.1 Genbank gene 135308 137305 . + . ID=gene-E3V84_02260;Name=E3V84_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02260 SOQE01000012.1 Protein Homology CDS 135308 137305 . + 0 ID=cds-TMR48337.1;Parent=gene-E3V84_02260;Dbxref=NCBI_GP:TMR48337.1;Name=TMR48337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071074.1;locus_tag=E3V84_02260;product=thiol-activated cytolysin;protein_id=TMR48337.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 137408 137491 . - . ID=gene-E3V84_02265;Name=E3V84_02265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02265;pseudo=true SOQE01000012.1 Protein Homology CDS 137408 137491 . - 0 ID=cds-E3V84_02265;Parent=gene-E3V84_02265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=E3V84_02265;product=cytidylate kinase;pseudo=true;transl_table=11 SOQE01000012.1 Genbank pseudogene 137563 137723 . - . ID=gene-E3V84_02270;Name=E3V84_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02270;pseudo=true SOQE01000012.1 Protein Homology CDS 137563 137723 . - 0 ID=cds-E3V84_02270;Parent=gene-E3V84_02270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163009.1;locus_tag=E3V84_02270;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 137919 138011 . + . ID=gene-E3V84_02275;Name=E3V84_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02275 SOQE01000012.1 Protein Homology CDS 137919 138011 . + 0 ID=cds-TMR48338.1;Parent=gene-E3V84_02275;Dbxref=NCBI_GP:TMR48338.1;Name=TMR48338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036030.1;locus_tag=E3V84_02275;product=D-fructose-6-phosphate amidotransferase;protein_id=TMR48338.1;transl_table=11 SOQE01000012.1 Genbank gene 137998 138411 . + . ID=gene-E3V84_02280;Name=E3V84_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02280 SOQE01000012.1 Protein Homology CDS 137998 138411 . + 0 ID=cds-TMR48339.1;Parent=gene-E3V84_02280;Dbxref=NCBI_GP:TMR48339.1;Name=TMR48339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=E3V84_02280;product=30S ribosomal protein S12;protein_id=TMR48339.1;transl_table=11 SOQE01000012.1 Genbank gene 138431 138901 . + . ID=gene-E3V84_02285;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=E3V84_02285 SOQE01000012.1 Protein Homology CDS 138431 138901 . + 0 ID=cds-TMR48340.1;Parent=gene-E3V84_02285;Dbxref=NCBI_GP:TMR48340.1;Name=TMR48340.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=E3V84_02285;product=30S ribosomal protein S7;protein_id=TMR48340.1;transl_table=11 SOQE01000012.1 Genbank gene 139180 141261 . + . ID=gene-E3V84_02290;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=E3V84_02290 SOQE01000012.1 Protein Homology CDS 139180 141261 . + 0 ID=cds-TMR48341.1;Parent=gene-E3V84_02290;Dbxref=NCBI_GP:TMR48341.1;Name=TMR48341.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357844.1;locus_tag=E3V84_02290;product=elongation factor G;protein_id=TMR48341.1;transl_table=11 SOQE01000012.1 Genbank gene 141365 145756 . + . ID=gene-E3V84_02295;Name=E3V84_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02295 SOQE01000012.1 Protein Homology CDS 141365 145756 . + 0 ID=cds-TMR48342.1;Parent=gene-E3V84_02295;Dbxref=NCBI_GP:TMR48342.1;Name=TMR48342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357845.1;locus_tag=E3V84_02295;product=PolC-type DNA polymerase III;protein_id=TMR48342.1;transl_table=11 SOQE01000012.1 Genbank gene 145794 146471 . + . ID=gene-E3V84_02300;Name=E3V84_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02300 SOQE01000012.1 Protein Homology CDS 145794 146471 . + 0 ID=cds-TMR48343.1;Parent=gene-E3V84_02300;Dbxref=NCBI_GP:TMR48343.1;Name=TMR48343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970260.1;locus_tag=E3V84_02300;product=hypothetical protein;protein_id=TMR48343.1;transl_table=11 SOQE01000012.1 Genbank gene 146485 146637 . + . ID=gene-E3V84_02305;Name=E3V84_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02305 SOQE01000012.1 Protein Homology CDS 146485 146637 . + 0 ID=cds-TMR48344.1;Parent=gene-E3V84_02305;Dbxref=NCBI_GP:TMR48344.1;Name=TMR48344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008869148.1;locus_tag=E3V84_02305;product=hypothetical protein;protein_id=TMR48344.1;transl_table=11 SOQE01000012.1 Genbank gene 146659 147900 . + . ID=gene-E3V84_02310;Name=E3V84_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02310 SOQE01000012.1 Protein Homology CDS 146659 147900 . + 0 ID=cds-TMR48345.1;Parent=gene-E3V84_02310;Dbxref=NCBI_GP:TMR48345.1;Name=TMR48345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357848.1;locus_tag=E3V84_02310;product=aminopeptidase;protein_id=TMR48345.1;transl_table=11 SOQE01000012.1 Genbank gene 147910 148140 . + . ID=gene-E3V84_02315;Name=E3V84_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02315 SOQE01000012.1 Protein Homology CDS 147910 148140 . + 0 ID=cds-TMR48346.1;Parent=gene-E3V84_02315;Dbxref=NCBI_GP:TMR48346.1;Name=TMR48346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357849.1;locus_tag=E3V84_02315;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TMR48346.1;transl_table=11 SOQE01000012.1 Genbank pseudogene 148161 148235 . + . ID=gene-E3V84_02320;Name=E3V84_02320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02320;pseudo=true SOQE01000012.1 Protein Homology CDS 148161 148235 . + 0 ID=cds-E3V84_02320;Parent=gene-E3V84_02320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_02320;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000012.1 Genbank gene 148498 149220 . + . ID=gene-E3V84_02325;Name=E3V84_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02325 SOQE01000012.1 Protein Homology CDS 148498 149220 . + 0 ID=cds-TMR48347.1;Parent=gene-E3V84_02325;Dbxref=NCBI_GP:TMR48347.1;Name=TMR48347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445407.1;locus_tag=E3V84_02325;product=rRNA pseudouridine synthase;protein_id=TMR48347.1;transl_table=11 SOQE01000012.1 Genbank gene 149229 149360 . + . ID=gene-E3V84_02330;Name=E3V84_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02330 SOQE01000012.1 Protein Homology CDS 149229 149360 . + 0 ID=cds-TMR48357.1;Parent=gene-E3V84_02330;Dbxref=NCBI_GP:TMR48357.1;Name=TMR48357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357851.1;locus_tag=E3V84_02330;product=hypothetical protein;protein_id=TMR48357.1;transl_table=11 SOQE01000012.1 Genbank gene 149332 150666 . + . ID=gene-E3V84_02335;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=E3V84_02335 SOQE01000012.1 Protein Homology CDS 149332 150666 . + 0 ID=cds-TMR48348.1;Parent=gene-E3V84_02335;Dbxref=NCBI_GP:TMR48348.1;Name=TMR48348.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357852.1;locus_tag=E3V84_02335;product=aminopeptidase C;protein_id=TMR48348.1;transl_table=11 SOQE01000012.1 Genbank gene 150828 151739 . - . ID=gene-E3V84_02340;Name=E3V84_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02340 SOQE01000012.1 Protein Homology CDS 150828 151739 . - 0 ID=cds-TMR48349.1;Parent=gene-E3V84_02340;Dbxref=NCBI_GP:TMR48349.1;Name=TMR48349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357853.1;locus_tag=E3V84_02340;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=TMR48349.1;transl_table=11 SOQE01000012.1 Genbank gene 151763 152566 . - . ID=gene-E3V84_02345;Name=E3V84_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02345 SOQE01000012.1 Protein Homology CDS 151763 152566 . - 0 ID=cds-TMR48350.1;Parent=gene-E3V84_02345;Dbxref=NCBI_GP:TMR48350.1;Name=TMR48350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357854.1;locus_tag=E3V84_02345;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=TMR48350.1;transl_table=11 SOQE01000012.1 Genbank gene 152594 153583 . - . ID=gene-E3V84_02350;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=E3V84_02350 SOQE01000012.1 Protein Homology CDS 152594 153583 . - 0 ID=cds-TMR48351.1;Parent=gene-E3V84_02350;Dbxref=NCBI_GP:TMR48351.1;Name=TMR48351.1;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021981.1;locus_tag=E3V84_02350;product=PTS mannose transporter subunit IIAB;protein_id=TMR48351.1;transl_table=11 SOQE01000012.1 Genbank gene 153819 154838 . - . ID=gene-E3V84_02355;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=E3V84_02355 SOQE01000012.1 Protein Homology CDS 153819 154838 . - 0 ID=cds-TMR48352.1;Parent=gene-E3V84_02355;Dbxref=NCBI_GP:TMR48352.1;Name=TMR48352.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445415.1;locus_tag=E3V84_02355;product=alcohol dehydrogenase AdhP;protein_id=TMR48352.1;transl_table=11 SOQE01000012.1 Genbank gene 155042 155159 . + . ID=gene-E3V84_02360;Name=E3V84_02360;end_range=155159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02360;partial=true SOQE01000012.1 Protein Homology CDS 155042 155159 . + 0 ID=cds-TMR48353.1;Parent=gene-E3V84_02360;Dbxref=NCBI_GP:TMR48353.1;Name=TMR48353.1;end_range=155159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_02360;partial=true;product=IS630 family transposase;protein_id=TMR48353.1;transl_table=11 ##sequence-region SOQE01000120.1 1 993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000120.1 Genbank region 1 993 . + . ID=SOQE01000120.1:1..993;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000120.1 Genbank gene 90 410 . - . ID=gene-E3V84_12040;Name=E3V84_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12040 SOQE01000120.1 Protein Homology CDS 90 410 . - 0 ID=cds-TMR42680.1;Parent=gene-E3V84_12040;Dbxref=NCBI_GP:TMR42680.1;Name=TMR42680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381729.1;locus_tag=E3V84_12040;product=hypothetical protein;protein_id=TMR42680.1;transl_table=11 SOQE01000120.1 Genbank gene 417 893 . - . ID=gene-E3V84_12045;Name=E3V84_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12045 SOQE01000120.1 Protein Homology CDS 417 893 . - 0 ID=cds-TMR42681.1;Parent=gene-E3V84_12045;Dbxref=NCBI_GP:TMR42681.1;Name=TMR42681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=E3V84_12045;product=hypothetical protein;protein_id=TMR42681.1;transl_table=11 ##sequence-region SOQE01000121.1 1 5902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000121.1 Genbank region 1 5902 . + . ID=SOQE01000121.1:1..5902;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000121.1 Genbank pseudogene 76 387 . - . ID=gene-E3V84_12050;Name=E3V84_12050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12050;pseudo=true SOQE01000121.1 Protein Homology CDS 76 387 . - 0 ID=cds-E3V84_12050;Parent=gene-E3V84_12050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000116.1;locus_tag=E3V84_12050;product=beta-carotene 15%2C15'-monooxygenase;pseudo=true;transl_table=11 SOQE01000121.1 Genbank gene 579 776 . - . ID=gene-E3V84_12055;Name=E3V84_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12055 SOQE01000121.1 GeneMarkS-2+ CDS 579 776 . - 0 ID=cds-TMR42672.1;Parent=gene-E3V84_12055;Dbxref=NCBI_GP:TMR42672.1;Name=TMR42672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_12055;product=hypothetical protein;protein_id=TMR42672.1;transl_table=11 SOQE01000121.1 Genbank gene 1073 1651 . - . ID=gene-E3V84_12060;Name=E3V84_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12060 SOQE01000121.1 Protein Homology CDS 1073 1651 . - 0 ID=cds-TMR42673.1;Parent=gene-E3V84_12060;Dbxref=NCBI_GP:TMR42673.1;Name=TMR42673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445528.1;locus_tag=E3V84_12060;product=shikimate kinase;protein_id=TMR42673.1;transl_table=11 SOQE01000121.1 Genbank gene 1651 2211 . - . ID=gene-E3V84_12065;Name=E3V84_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12065 SOQE01000121.1 Protein Homology CDS 1651 2211 . - 0 ID=cds-TMR42674.1;Parent=gene-E3V84_12065;Dbxref=NCBI_GP:TMR42674.1;Name=TMR42674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445527.1;locus_tag=E3V84_12065;product=N-acetyltransferase;protein_id=TMR42674.1;transl_table=11 SOQE01000121.1 Genbank pseudogene 2198 2775 . - . ID=gene-E3V84_12070;Name=E3V84_12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12070;pseudo=true SOQE01000121.1 Protein Homology CDS 2198 2775 . - 0 ID=cds-E3V84_12070;Parent=gene-E3V84_12070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445526.1;locus_tag=E3V84_12070;product=flavin reductase family protein;pseudo=true;transl_table=11 SOQE01000121.1 Genbank gene 3058 3453 . - . ID=gene-E3V84_12075;Name=E3V84_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12075 SOQE01000121.1 Protein Homology CDS 3058 3453 . - 0 ID=cds-TMR42675.1;Parent=gene-E3V84_12075;Dbxref=NCBI_GP:TMR42675.1;Name=TMR42675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445525.1;locus_tag=E3V84_12075;product=helicase;protein_id=TMR42675.1;transl_table=11 SOQE01000121.1 Genbank gene 3549 3803 . - . ID=gene-E3V84_12080;Name=E3V84_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12080 SOQE01000121.1 Protein Homology CDS 3549 3803 . - 0 ID=cds-TMR42676.1;Parent=gene-E3V84_12080;Dbxref=NCBI_GP:TMR42676.1;Name=TMR42676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358081.1;locus_tag=E3V84_12080;product=DUF1912 family protein;protein_id=TMR42676.1;transl_table=11 SOQE01000121.1 Genbank gene 3813 5147 . - . ID=gene-E3V84_12085;Name=E3V84_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12085 SOQE01000121.1 Protein Homology CDS 3813 5147 . - 0 ID=cds-TMR42677.1;Parent=gene-E3V84_12085;Dbxref=NCBI_GP:TMR42677.1;Name=TMR42677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445523.1;locus_tag=E3V84_12085;product=DUF438 domain-containing protein;protein_id=TMR42677.1;transl_table=11 SOQE01000121.1 Genbank gene 5147 5380 . - . ID=gene-E3V84_12090;Name=E3V84_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12090 SOQE01000121.1 Protein Homology CDS 5147 5380 . - 0 ID=cds-TMR42678.1;Parent=gene-E3V84_12090;Dbxref=NCBI_GP:TMR42678.1;Name=TMR42678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445522.1;locus_tag=E3V84_12090;product=DUF1858 domain-containing protein;protein_id=TMR42678.1;transl_table=11 SOQE01000121.1 Genbank gene 5493 5902 . - . ID=gene-E3V84_12095;Name=E3V84_12095;end_range=5902,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12095;partial=true SOQE01000121.1 Protein Homology CDS 5493 5902 . - 2 ID=cds-TMR42679.1;Parent=gene-E3V84_12095;Dbxref=NCBI_GP:TMR42679.1;Name=TMR42679.1;end_range=5902,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_12095;partial=true;product=hypothetical protein;protein_id=TMR42679.1;transl_table=11 ##sequence-region SOQE01000122.1 1 50503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000122.1 Genbank region 1 50503 . + . ID=SOQE01000122.1:1..50503;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000122.1 Genbank gene 1 158 . + . ID=gene-E3V84_12100;Name=E3V84_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12100;partial=true;start_range=.,1 SOQE01000122.1 Protein Homology CDS 1 158 . + 2 ID=cds-TMR42626.1;Parent=gene-E3V84_12100;Dbxref=NCBI_GP:TMR42626.1;Name=TMR42626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_12100;partial=true;product=IS630 family transposase;protein_id=TMR42626.1;start_range=.,1;transl_table=11 SOQE01000122.1 Genbank pseudogene 247 387 . + . ID=gene-E3V84_12105;Name=E3V84_12105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12105;pseudo=true SOQE01000122.1 Protein Homology CDS 247 387 . + 0 ID=cds-E3V84_12105;Parent=gene-E3V84_12105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_12105;product=ISNCY family transposase;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 414 590 . - . ID=gene-E3V84_12110;Name=E3V84_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12110 SOQE01000122.1 Protein Homology CDS 414 590 . - 0 ID=cds-TMR42627.1;Parent=gene-E3V84_12110;Dbxref=NCBI_GP:TMR42627.1;Name=TMR42627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001858191.1;locus_tag=E3V84_12110;product=glycosyl transferase family 8;protein_id=TMR42627.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 701 899 . - . ID=gene-E3V84_12115;Name=E3V84_12115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12115;pseudo=true SOQE01000122.1 Protein Homology CDS 701 899 . - 0 ID=cds-E3V84_12115;Parent=gene-E3V84_12115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808887.1;locus_tag=E3V84_12115;product=glycosyl transferase family 8;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 1653 3197 . - . ID=gene-E3V84_12120;Name=E3V84_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12120 SOQE01000122.1 Protein Homology CDS 1653 3197 . - 0 ID=cds-TMR42628.1;Parent=gene-E3V84_12120;Dbxref=NCBI_GP:TMR42628.1;Name=TMR42628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=E3V84_12120;product=peptide chain release factor 3;protein_id=TMR42628.1;transl_table=11 SOQE01000122.1 Genbank gene 3410 3712 . + . ID=gene-E3V84_12125;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=E3V84_12125 SOQE01000122.1 Protein Homology CDS 3410 3712 . + 0 ID=cds-TMR42629.1;Parent=gene-E3V84_12125;Dbxref=NCBI_GP:TMR42629.1;Name=TMR42629.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357989.1;locus_tag=E3V84_12125;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=TMR42629.1;transl_table=11 SOQE01000122.1 Genbank gene 3712 5178 . + . ID=gene-E3V84_12130;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=E3V84_12130 SOQE01000122.1 Protein Homology CDS 3712 5178 . + 0 ID=cds-TMR42630.1;Parent=gene-E3V84_12130;Dbxref=NCBI_GP:TMR42630.1;Name=TMR42630.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446768.1;locus_tag=E3V84_12130;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=TMR42630.1;transl_table=11 SOQE01000122.1 Genbank gene 5178 6620 . + . ID=gene-E3V84_12135;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=E3V84_12135 SOQE01000122.1 Protein Homology CDS 5178 6620 . + 0 ID=cds-TMR42631.1;Parent=gene-E3V84_12135;Dbxref=NCBI_GP:TMR42631.1;Name=TMR42631.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357987.1;locus_tag=E3V84_12135;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=TMR42631.1;transl_table=11 SOQE01000122.1 Genbank gene 6751 7311 . + . ID=gene-E3V84_12140;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=E3V84_12140 SOQE01000122.1 Protein Homology CDS 6751 7311 . + 0 ID=cds-TMR42632.1;Parent=gene-E3V84_12140;Dbxref=NCBI_GP:TMR42632.1;Name=TMR42632.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=E3V84_12140;product=elongation factor P;protein_id=TMR42632.1;transl_table=11 SOQE01000122.1 Genbank gene 7333 7722 . + . ID=gene-E3V84_12145;Name=E3V84_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12145 SOQE01000122.1 Protein Homology CDS 7333 7722 . + 0 ID=cds-TMR42633.1;Parent=gene-E3V84_12145;Dbxref=NCBI_GP:TMR42633.1;Name=TMR42633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446772.1;locus_tag=E3V84_12145;product=Asp23/Gls24 family envelope stress response protein;protein_id=TMR42633.1;transl_table=11 SOQE01000122.1 Genbank gene 7715 8140 . + . ID=gene-E3V84_12150;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=E3V84_12150 SOQE01000122.1 Protein Homology CDS 7715 8140 . + 0 ID=cds-TMR42634.1;Parent=gene-E3V84_12150;Dbxref=NCBI_GP:TMR42634.1;Name=TMR42634.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203629.1;locus_tag=E3V84_12150;product=transcription antitermination factor NusB;protein_id=TMR42634.1;transl_table=11 SOQE01000122.1 Genbank gene 8254 9021 . - . ID=gene-E3V84_12155;Name=E3V84_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12155 SOQE01000122.1 Protein Homology CDS 8254 9021 . - 0 ID=cds-TMR42635.1;Parent=gene-E3V84_12155;Dbxref=NCBI_GP:TMR42635.1;Name=TMR42635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357981.1;locus_tag=E3V84_12155;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=TMR42635.1;transl_table=11 SOQE01000122.1 Genbank gene 9018 9884 . - . ID=gene-E3V84_12160;Name=E3V84_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12160 SOQE01000122.1 Protein Homology CDS 9018 9884 . - 0 ID=cds-TMR42636.1;Parent=gene-E3V84_12160;Dbxref=NCBI_GP:TMR42636.1;Name=TMR42636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357980.1;locus_tag=E3V84_12160;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=TMR42636.1;transl_table=11 SOQE01000122.1 Genbank gene 9921 11288 . - . ID=gene-E3V84_12165;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=E3V84_12165 SOQE01000122.1 Protein Homology CDS 9921 11288 . - 0 ID=cds-TMR42637.1;Parent=gene-E3V84_12165;Dbxref=NCBI_GP:TMR42637.1;Name=TMR42637.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357979.1;locus_tag=E3V84_12165;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=TMR42637.1;transl_table=11 SOQE01000122.1 Genbank gene 11300 11722 . - . ID=gene-E3V84_12170;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=E3V84_12170 SOQE01000122.1 Protein Homology CDS 11300 11722 . - 0 ID=cds-TMR42670.1;Parent=gene-E3V84_12170;Dbxref=NCBI_GP:TMR42670.1;Name=TMR42670.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357978.1;locus_tag=E3V84_12170;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=TMR42670.1;transl_table=11 SOQE01000122.1 Genbank gene 11719 12204 . - . ID=gene-E3V84_12175;Name=E3V84_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12175 SOQE01000122.1 Protein Homology CDS 11719 12204 . - 0 ID=cds-TMR42638.1;Parent=gene-E3V84_12175;Dbxref=NCBI_GP:TMR42638.1;Name=TMR42638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357977.1;locus_tag=E3V84_12175;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=TMR42638.1;transl_table=11 SOQE01000122.1 Genbank gene 12207 13442 . - . ID=gene-E3V84_12180;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=E3V84_12180 SOQE01000122.1 Protein Homology CDS 12207 13442 . - 0 ID=cds-TMR42639.1;Parent=gene-E3V84_12180;Dbxref=NCBI_GP:TMR42639.1;Name=TMR42639.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446781.1;locus_tag=E3V84_12180;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=TMR42639.1;transl_table=11 SOQE01000122.1 Genbank gene 13464 14195 . - . ID=gene-E3V84_12185;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=E3V84_12185 SOQE01000122.1 Protein Homology CDS 13464 14195 . - 0 ID=cds-TMR42640.1;Parent=gene-E3V84_12185;Dbxref=NCBI_GP:TMR42640.1;Name=TMR42640.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357975.1;locus_tag=E3V84_12185;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=TMR42640.1;transl_table=11 SOQE01000122.1 Genbank gene 14229 15149 . - . ID=gene-E3V84_12190;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=E3V84_12190 SOQE01000122.1 Protein Homology CDS 14229 15149 . - 0 ID=cds-TMR42641.1;Parent=gene-E3V84_12190;Dbxref=NCBI_GP:TMR42641.1;Name=TMR42641.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357974.1;locus_tag=E3V84_12190;product=ACP S-malonyltransferase;protein_id=TMR42641.1;transl_table=11 SOQE01000122.1 Genbank gene 15142 16116 . - . ID=gene-E3V84_12195;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=E3V84_12195 SOQE01000122.1 Protein Homology CDS 15142 16116 . - 0 ID=cds-TMR42642.1;Parent=gene-E3V84_12195;Dbxref=NCBI_GP:TMR42642.1;Name=TMR42642.1;gbkey=CDS;gene=fabK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357973.1;locus_tag=E3V84_12195;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=TMR42642.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 16222 16305 . + . ID=gene-E3V84_12200;Name=E3V84_12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12200;pseudo=true SOQE01000122.1 Protein Homology CDS 16222 16305 . + 0 ID=cds-E3V84_12200;Parent=gene-E3V84_12200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_12200;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 16339 16563 . - . ID=gene-E3V84_12205;Name=E3V84_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12205 SOQE01000122.1 Protein Homology CDS 16339 16563 . - 0 ID=cds-TMR42643.1;Parent=gene-E3V84_12205;Dbxref=NCBI_GP:TMR42643.1;Name=TMR42643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446785.1;locus_tag=E3V84_12205;product=acyl carrier protein;protein_id=TMR42643.1;transl_table=11 SOQE01000122.1 Genbank gene 16622 17596 . - . ID=gene-E3V84_12210;Name=E3V84_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12210 SOQE01000122.1 Protein Homology CDS 16622 17596 . - 0 ID=cds-TMR42644.1;Parent=gene-E3V84_12210;Dbxref=NCBI_GP:TMR42644.1;Name=TMR42644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357971.1;locus_tag=E3V84_12210;product=ketoacyl-ACP synthase III;protein_id=TMR42644.1;transl_table=11 SOQE01000122.1 Genbank gene 17596 18030 . - . ID=gene-E3V84_12215;Name=E3V84_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12215 SOQE01000122.1 Protein Homology CDS 17596 18030 . - 0 ID=cds-TMR42645.1;Parent=gene-E3V84_12215;Dbxref=NCBI_GP:TMR42645.1;Name=TMR42645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357970.1;locus_tag=E3V84_12215;product=MarR family transcriptional regulator;protein_id=TMR42645.1;transl_table=11 SOQE01000122.1 Genbank gene 18124 18909 . - . ID=gene-E3V84_12220;Name=E3V84_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12220 SOQE01000122.1 Protein Homology CDS 18124 18909 . - 0 ID=cds-TMR42646.1;Parent=gene-E3V84_12220;Dbxref=NCBI_GP:TMR42646.1;Name=TMR42646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357969.1;locus_tag=E3V84_12220;product=enoyl-CoA hydratase;protein_id=TMR42646.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 19091 19192 . + . ID=gene-E3V84_12225;Name=E3V84_12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12225;pseudo=true SOQE01000122.1 Protein Homology CDS 19091 19192 . + 0 ID=cds-E3V84_12225;Parent=gene-E3V84_12225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808883.1;locus_tag=E3V84_12225;product=aspartate kinase;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 19279 20643 . + . ID=gene-E3V84_12230;Name=E3V84_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12230 SOQE01000122.1 Protein Homology CDS 19279 20643 . + 0 ID=cds-TMR42647.1;Parent=gene-E3V84_12230;Dbxref=NCBI_GP:TMR42647.1;Name=TMR42647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357968.1;locus_tag=E3V84_12230;product=aspartate kinase;protein_id=TMR42647.1;transl_table=11 SOQE01000122.1 Genbank gene 20646 21017 . + . ID=gene-E3V84_12235;Name=E3V84_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12235 SOQE01000122.1 Protein Homology CDS 20646 21017 . + 0 ID=cds-TMR42648.1;Parent=gene-E3V84_12235;Dbxref=NCBI_GP:TMR42648.1;Name=TMR42648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357967.1;locus_tag=E3V84_12235;product=DUF956 family protein;protein_id=TMR42648.1;transl_table=11 SOQE01000122.1 Genbank gene 21231 22505 . + . ID=gene-E3V84_12240;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=E3V84_12240 SOQE01000122.1 Protein Homology CDS 21231 22505 . + 0 ID=cds-TMR42649.1;Parent=gene-E3V84_12240;Dbxref=NCBI_GP:TMR42649.1;Name=TMR42649.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446791.1;locus_tag=E3V84_12240;product=serine--tRNA ligase;protein_id=TMR42649.1;transl_table=11 SOQE01000122.1 Genbank gene 22530 23429 . - . ID=gene-E3V84_12245;Name=E3V84_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12245 SOQE01000122.1 Protein Homology CDS 22530 23429 . - 0 ID=cds-TMR42650.1;Parent=gene-E3V84_12245;Dbxref=NCBI_GP:TMR42650.1;Name=TMR42650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446821.1;locus_tag=E3V84_12245;product=TDT family transporter;protein_id=TMR42650.1;transl_table=11 SOQE01000122.1 Genbank gene 23540 24088 . - . ID=gene-E3V84_12250;Name=E3V84_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12250 SOQE01000122.1 Protein Homology CDS 23540 24088 . - 0 ID=cds-TMR42651.1;Parent=gene-E3V84_12250;Dbxref=NCBI_GP:TMR42651.1;Name=TMR42651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446822.1;locus_tag=E3V84_12250;product=carboxymuconolactone decarboxylase family protein;protein_id=TMR42651.1;transl_table=11 SOQE01000122.1 Genbank gene 24411 25733 . - . ID=gene-E3V84_12255;Name=E3V84_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12255 SOQE01000122.1 Protein Homology CDS 24411 25733 . - 0 ID=cds-TMR42652.1;Parent=gene-E3V84_12255;Dbxref=NCBI_GP:TMR42652.1;Name=TMR42652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357963.1;locus_tag=E3V84_12255;product=sodium:alanine symporter family protein;protein_id=TMR42652.1;transl_table=11 SOQE01000122.1 cmsearch riboswitch 25824 25912 . - . ID=id-SOQE01000122.1:25824..25912;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000122.1 Genbank gene 26167 27333 . + . ID=gene-E3V84_12260;Name=E3V84_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12260 SOQE01000122.1 Protein Homology CDS 26167 27333 . + 0 ID=cds-TMR42653.1;Parent=gene-E3V84_12260;Dbxref=NCBI_GP:TMR42653.1;Name=TMR42653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160547.1;locus_tag=E3V84_12260;product=IS30 family transposase;protein_id=TMR42653.1;transl_table=11 SOQE01000122.1 Genbank gene 27621 29957 . - . ID=gene-E3V84_12265;Name=E3V84_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12265 SOQE01000122.1 Protein Homology CDS 27621 29957 . - 0 ID=cds-TMR42654.1;Parent=gene-E3V84_12265;Dbxref=NCBI_GP:TMR42654.1;Name=TMR42654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446834.1;locus_tag=E3V84_12265;product=endonuclease MutS2;protein_id=TMR42654.1;transl_table=11 SOQE01000122.1 Genbank gene 30061 30609 . - . ID=gene-E3V84_12270;Name=E3V84_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12270 SOQE01000122.1 Protein Homology CDS 30061 30609 . - 0 ID=cds-TMR42655.1;Parent=gene-E3V84_12270;Dbxref=NCBI_GP:TMR42655.1;Name=TMR42655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446835.1;locus_tag=E3V84_12270;product=CvpA family protein;protein_id=TMR42655.1;transl_table=11 SOQE01000122.1 Genbank gene 30606 30908 . - . ID=gene-E3V84_12275;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=E3V84_12275 SOQE01000122.1 Protein Homology CDS 30606 30908 . - 0 ID=cds-TMR42656.1;Parent=gene-E3V84_12275;Dbxref=NCBI_GP:TMR42656.1;Name=TMR42656.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446836.1;locus_tag=E3V84_12275;product=cell division protein ZapA;protein_id=TMR42656.1;transl_table=11 SOQE01000122.1 Genbank gene 30995 31876 . + . ID=gene-E3V84_12280;Name=E3V84_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12280 SOQE01000122.1 Protein Homology CDS 30995 31876 . + 0 ID=cds-TMR42657.1;Parent=gene-E3V84_12280;Dbxref=NCBI_GP:TMR42657.1;Name=TMR42657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446837.1;locus_tag=E3V84_12280;product=ribonuclease HIII;protein_id=TMR42657.1;transl_table=11 SOQE01000122.1 Genbank gene 31880 32494 . + . ID=gene-E3V84_12285;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=E3V84_12285 SOQE01000122.1 Protein Homology CDS 31880 32494 . + 0 ID=cds-TMR42658.1;Parent=gene-E3V84_12285;Dbxref=NCBI_GP:TMR42658.1;Name=TMR42658.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357958.1;locus_tag=E3V84_12285;product=signal peptidase I;protein_id=TMR42658.1;transl_table=11 SOQE01000122.1 Genbank gene 32774 35140 . + . ID=gene-E3V84_12290;Name=E3V84_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12290 SOQE01000122.1 Protein Homology CDS 32774 35140 . + 0 ID=cds-TMR42659.1;Parent=gene-E3V84_12290;Dbxref=NCBI_GP:TMR42659.1;Name=TMR42659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446839.1;locus_tag=E3V84_12290;product=ATP-dependent RecD-like DNA helicase;protein_id=TMR42659.1;transl_table=11 SOQE01000122.1 Genbank gene 35294 36577 . - . ID=gene-E3V84_12295;Name=E3V84_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12295 SOQE01000122.1 Protein Homology CDS 35294 36577 . - 0 ID=cds-TMR42660.1;Parent=gene-E3V84_12295;Dbxref=NCBI_GP:TMR42660.1;Name=TMR42660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446840.1;locus_tag=E3V84_12295;product=trigger factor;protein_id=TMR42660.1;transl_table=11 SOQE01000122.1 Genbank gene 37127 38752 . - . ID=gene-E3V84_12300;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=E3V84_12300 SOQE01000122.1 Protein Homology CDS 37127 38752 . - 0 ID=cds-TMR42661.1;Parent=gene-E3V84_12300;Dbxref=NCBI_GP:TMR42661.1;Name=TMR42661.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359290.1;locus_tag=E3V84_12300;product=alpha%2Calpha-phosphotrehalase;protein_id=TMR42661.1;transl_table=11 SOQE01000122.1 Genbank gene 38844 38957 . - . ID=gene-E3V84_12305;Name=E3V84_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12305 SOQE01000122.1 Protein Homology CDS 38844 38957 . - 0 ID=cds-TMR42671.1;Parent=gene-E3V84_12305;Dbxref=NCBI_GP:TMR42671.1;Name=TMR42671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_12305;product=DNA alkylation repair protein;protein_id=TMR42671.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 38930 41047 . - . ID=gene-E3V84_12310;Name=treB;gbkey=Gene;gene=treB;gene_biotype=pseudogene;locus_tag=E3V84_12310;pseudo=true SOQE01000122.1 Protein Homology CDS 38930 41047 . - 0 ID=cds-E3V84_12310;Parent=gene-E3V84_12310;Note=internal stop;gbkey=CDS;gene=treB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359291.1;locus_tag=E3V84_12310;product=PTS trehalose transporter subunit IIBC;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 41082 41792 . + . ID=gene-E3V84_12315;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=E3V84_12315 SOQE01000122.1 Protein Homology CDS 41082 41792 . + 0 ID=cds-TMR42662.1;Parent=gene-E3V84_12315;Dbxref=NCBI_GP:TMR42662.1;Name=TMR42662.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359292.1;locus_tag=E3V84_12315;product=trehalose operon repressor;protein_id=TMR42662.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 41947 43223 . + . ID=gene-E3V84_12320;Name=E3V84_12320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12320;pseudo=true SOQE01000122.1 Protein Homology CDS 41947 43223 . + 0 ID=cds-E3V84_12320;Parent=gene-E3V84_12320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V84_12320;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 43289 44215 . - . ID=gene-E3V84_12325;Name=E3V84_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12325 SOQE01000122.1 Protein Homology CDS 43289 44215 . - 0 ID=cds-TMR42663.1;Parent=gene-E3V84_12325;Dbxref=NCBI_GP:TMR42663.1;Name=TMR42663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445465.1;locus_tag=E3V84_12325;product=ABC transporter ATP-binding protein;protein_id=TMR42663.1;transl_table=11 SOQE01000122.1 Genbank gene 44226 45293 . - . ID=gene-E3V84_12330;Name=E3V84_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12330 SOQE01000122.1 Protein Homology CDS 44226 45293 . - 0 ID=cds-TMR42664.1;Parent=gene-E3V84_12330;Dbxref=NCBI_GP:TMR42664.1;Name=TMR42664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359296.1;locus_tag=E3V84_12330;product=ABC transporter ATP-binding protein;protein_id=TMR42664.1;transl_table=11 SOQE01000122.1 Genbank gene 45302 46228 . - . ID=gene-E3V84_12335;Name=E3V84_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12335 SOQE01000122.1 Protein Homology CDS 45302 46228 . - 0 ID=cds-TMR42665.1;Parent=gene-E3V84_12335;Dbxref=NCBI_GP:TMR42665.1;Name=TMR42665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445463.1;locus_tag=E3V84_12335;product=ABC transporter permease;protein_id=TMR42665.1;transl_table=11 SOQE01000122.1 Genbank gene 46228 47724 . - . ID=gene-E3V84_12340;Name=E3V84_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12340 SOQE01000122.1 Protein Homology CDS 46228 47724 . - 0 ID=cds-TMR42666.1;Parent=gene-E3V84_12340;Dbxref=NCBI_GP:TMR42666.1;Name=TMR42666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359298.1;locus_tag=E3V84_12340;product=ABC transporter permease;protein_id=TMR42666.1;transl_table=11 SOQE01000122.1 Genbank gene 47791 49770 . - . ID=gene-E3V84_12345;Name=E3V84_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12345 SOQE01000122.1 Protein Homology CDS 47791 49770 . - 0 ID=cds-TMR42667.1;Parent=gene-E3V84_12345;Dbxref=NCBI_GP:TMR42667.1;Name=TMR42667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359299.1;locus_tag=E3V84_12345;product=peptide ABC transporter substrate-binding protein;protein_id=TMR42667.1;transl_table=11 SOQE01000122.1 Genbank gene 49897 50079 . + . ID=gene-E3V84_12350;Name=E3V84_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12350 SOQE01000122.1 Protein Homology CDS 49897 50079 . + 0 ID=cds-TMR42668.1;Parent=gene-E3V84_12350;Dbxref=NCBI_GP:TMR42668.1;Name=TMR42668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855484.1;locus_tag=E3V84_12350;product=hypothetical protein;protein_id=TMR42668.1;transl_table=11 SOQE01000122.1 Genbank pseudogene 50063 50248 . - . ID=gene-E3V84_12355;Name=E3V84_12355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_12355;pseudo=true SOQE01000122.1 Protein Homology CDS 50063 50248 . - 0 ID=cds-E3V84_12355;Parent=gene-E3V84_12355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_12355;product=transposase;pseudo=true;transl_table=11 SOQE01000122.1 Genbank gene 50253 50503 . - . ID=gene-E3V84_12360;Name=E3V84_12360;end_range=50503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_12360;partial=true SOQE01000122.1 Protein Homology CDS 50253 50503 . - 2 ID=cds-TMR42669.1;Parent=gene-E3V84_12360;Dbxref=NCBI_GP:TMR42669.1;Name=TMR42669.1;end_range=50503,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_12360;partial=true;product=IS630 family transposase;protein_id=TMR42669.1;transl_table=11 ##sequence-region SOQE01000123.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000123.1 Genbank region 1 1025 . + . ID=SOQE01000123.1:1..1025;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 ##sequence-region SOQE01000124.1 1 4956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000124.1 Genbank region 1 4956 . + . ID=SOQE01000124.1:1..4956;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000124.1 Genbank gene 69 1620 . + . ID=gene-E3V84_12365;Name=E3V84_12365;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V84_12365 SOQE01000124.1 Genbank rRNA 69 1620 . + . ID=rna-E3V84_12365;Parent=gene-E3V84_12365;gbkey=rRNA;locus_tag=E3V84_12365;product=16S ribosomal RNA SOQE01000124.1 Genbank exon 69 1620 . + . ID=exon-E3V84_12365-1;Parent=rna-E3V84_12365;gbkey=rRNA;locus_tag=E3V84_12365;product=16S ribosomal RNA SOQE01000124.1 Genbank gene 1665 1737 . + . ID=gene-E3V84_12370;Name=E3V84_12370;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_12370 SOQE01000124.1 tRNAscan-SE tRNA 1665 1737 . + . ID=rna-E3V84_12370;Parent=gene-E3V84_12370;anticodon=(pos:1698..1700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_12370;product=tRNA-Ala SOQE01000124.1 tRNAscan-SE exon 1665 1737 . + . ID=exon-E3V84_12370-1;Parent=rna-E3V84_12370;anticodon=(pos:1698..1700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_12370;product=tRNA-Ala SOQE01000124.1 Genbank gene 1861 4764 . + . ID=gene-E3V84_12375;Name=E3V84_12375;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V84_12375 SOQE01000124.1 Genbank rRNA 1861 4764 . + . ID=rna-E3V84_12375;Parent=gene-E3V84_12375;gbkey=rRNA;locus_tag=E3V84_12375;product=23S ribosomal RNA SOQE01000124.1 Genbank exon 1861 4764 . + . ID=exon-E3V84_12375-1;Parent=rna-E3V84_12375;gbkey=rRNA;locus_tag=E3V84_12375;product=23S ribosomal RNA SOQE01000124.1 Genbank gene 4840 4955 . + . ID=gene-E3V84_12380;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V84_12380 SOQE01000124.1 cmsearch rRNA 4840 4955 . + . ID=rna-E3V84_12380;Parent=gene-E3V84_12380;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_12380;product=5S ribosomal RNA SOQE01000124.1 cmsearch exon 4840 4955 . + . ID=exon-E3V84_12380-1;Parent=rna-E3V84_12380;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_12380;product=5S ribosomal RNA ##sequence-region SOQE01000013.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000013.1 Genbank region 1 530 . + . ID=SOQE01000013.1:1..530;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000013.1 Genbank pseudogene 162 530 . - . ID=gene-E3V84_02365;Name=E3V84_02365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02365;pseudo=true SOQE01000013.1 Protein Homology CDS 162 530 . - 0 ID=cds-E3V84_02365;Parent=gene-E3V84_02365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339678.1;locus_tag=E3V84_02365;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000014.1 1 25168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000014.1 Genbank region 1 25168 . + . ID=SOQE01000014.1:1..25168;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000014.1 Genbank pseudogene 145 506 . - . ID=gene-E3V84_02370;Name=E3V84_02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02370;pseudo=true SOQE01000014.1 Protein Homology CDS 145 506 . - 0 ID=cds-E3V84_02370;Parent=gene-E3V84_02370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895063.1;locus_tag=E3V84_02370;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000014.1 Genbank pseudogene 514 594 . + . ID=gene-E3V84_02375;Name=E3V84_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02375;pseudo=true SOQE01000014.1 Protein Homology CDS 514 594 . + 0 ID=cds-E3V84_02375;Parent=gene-E3V84_02375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820552.1;locus_tag=E3V84_02375;product=UDP-galactopuranose mutase;pseudo=true;transl_table=11 SOQE01000014.1 Genbank gene 768 1457 . - . ID=gene-E3V84_02380;Name=E3V84_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02380 SOQE01000014.1 Protein Homology CDS 768 1457 . - 0 ID=cds-TMR47920.1;Parent=gene-E3V84_02380;Dbxref=NCBI_GP:TMR47920.1;Name=TMR47920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=E3V84_02380;product=50S ribosomal protein L1;protein_id=TMR47920.1;transl_table=11 SOQE01000014.1 Genbank gene 1441 1668 . + . ID=gene-E3V84_02385;Name=E3V84_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02385 SOQE01000014.1 Protein Homology CDS 1441 1668 . + 0 ID=cds-TMR47921.1;Parent=gene-E3V84_02385;Dbxref=NCBI_GP:TMR47921.1;Name=TMR47921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152039.1;locus_tag=E3V84_02385;product=hypothetical protein;protein_id=TMR47921.1;transl_table=11 SOQE01000014.1 Genbank gene 1665 2090 . - . ID=gene-E3V84_02390;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=E3V84_02390 SOQE01000014.1 Protein Homology CDS 1665 2090 . - 0 ID=cds-TMR47922.1;Parent=gene-E3V84_02390;Dbxref=NCBI_GP:TMR47922.1;Name=TMR47922.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358149.1;locus_tag=E3V84_02390;product=50S ribosomal protein L11;protein_id=TMR47922.1;transl_table=11 SOQE01000014.1 Genbank gene 2399 3115 . - . ID=gene-E3V84_02395;Name=E3V84_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02395 SOQE01000014.1 Protein Homology CDS 2399 3115 . - 0 ID=cds-TMR47923.1;Parent=gene-E3V84_02395;Dbxref=NCBI_GP:TMR47923.1;Name=TMR47923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358148.1;locus_tag=E3V84_02395;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=TMR47923.1;transl_table=11 SOQE01000014.1 Genbank pseudogene 3170 3241 . + . ID=gene-E3V84_02400;Name=E3V84_02400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02400;pseudo=true SOQE01000014.1 Protein Homology CDS 3170 3241 . + 0 ID=cds-E3V84_02400;Parent=gene-E3V84_02400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_02400;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000014.1 Genbank gene 3221 3694 . - . ID=gene-E3V84_02405;Name=E3V84_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02405 SOQE01000014.1 Protein Homology CDS 3221 3694 . - 0 ID=cds-TMR47924.1;Parent=gene-E3V84_02405;Dbxref=NCBI_GP:TMR47924.1;Name=TMR47924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446674.1;locus_tag=E3V84_02405;product=HIT family protein;protein_id=TMR47924.1;transl_table=11 SOQE01000014.1 Genbank gene 3696 4733 . - . ID=gene-E3V84_02410;Name=E3V84_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02410 SOQE01000014.1 Protein Homology CDS 3696 4733 . - 0 ID=cds-TMR47925.1;Parent=gene-E3V84_02410;Dbxref=NCBI_GP:TMR47925.1;Name=TMR47925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446675.1;locus_tag=E3V84_02410;product=M42 family peptidase;protein_id=TMR47925.1;transl_table=11 SOQE01000014.1 Genbank gene 4936 6276 . - . ID=gene-E3V84_02415;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=E3V84_02415 SOQE01000014.1 Protein Homology CDS 4936 6276 . - 0 ID=cds-TMR47926.1;Parent=gene-E3V84_02415;Dbxref=NCBI_GP:TMR47926.1;Name=TMR47926.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446676.1;locus_tag=E3V84_02415;product=branched-chain amino acid transport system II carrier protein;protein_id=TMR47926.1;transl_table=11 SOQE01000014.1 Genbank gene 6433 6720 . - . ID=gene-E3V84_02420;Name=E3V84_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02420 SOQE01000014.1 Protein Homology CDS 6433 6720 . - 0 ID=cds-TMR47927.1;Parent=gene-E3V84_02420;Dbxref=NCBI_GP:TMR47927.1;Name=TMR47927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446677.1;locus_tag=E3V84_02420;product=rhodanese-like domain-containing protein;protein_id=TMR47927.1;transl_table=11 SOQE01000014.1 Genbank gene 6731 6967 . - . ID=gene-E3V84_02425;Name=E3V84_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02425 SOQE01000014.1 Protein Homology CDS 6731 6967 . - 0 ID=cds-TMR47928.1;Parent=gene-E3V84_02425;Dbxref=NCBI_GP:TMR47928.1;Name=TMR47928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1%2CRefSeq:WP_001811927.1;locus_tag=E3V84_02425;product=hypothetical protein;protein_id=TMR47928.1;transl_table=11 SOQE01000014.1 Genbank gene 6971 7549 . - . ID=gene-E3V84_02430;Name=E3V84_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02430 SOQE01000014.1 Protein Homology CDS 6971 7549 . - 0 ID=cds-TMR47929.1;Parent=gene-E3V84_02430;Dbxref=NCBI_GP:TMR47929.1;Name=TMR47929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358142.1;locus_tag=E3V84_02430;product=uracil-DNA glycosylase family protein;protein_id=TMR47929.1;transl_table=11 SOQE01000014.1 Genbank gene 7603 9003 . - . ID=gene-E3V84_02435;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=E3V84_02435 SOQE01000014.1 Protein Homology CDS 7603 9003 . - 0 ID=cds-TMR47930.1;Parent=gene-E3V84_02435;Dbxref=NCBI_GP:TMR47930.1;Name=TMR47930.1;gbkey=CDS;gene=pepV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358141.1;locus_tag=E3V84_02435;product=dipeptidase PepV;protein_id=TMR47930.1;transl_table=11 SOQE01000014.1 Genbank gene 9016 9621 . - . ID=gene-E3V84_02440;Name=E3V84_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02440 SOQE01000014.1 Protein Homology CDS 9016 9621 . - 0 ID=cds-TMR47931.1;Parent=gene-E3V84_02440;Dbxref=NCBI_GP:TMR47931.1;Name=TMR47931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358140.1;locus_tag=E3V84_02440;product=nitroreductase family protein;protein_id=TMR47931.1;transl_table=11 SOQE01000014.1 Genbank gene 9792 10592 . + . ID=gene-E3V84_02445;Name=E3V84_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02445 SOQE01000014.1 Protein Homology CDS 9792 10592 . + 0 ID=cds-TMR47932.1;Parent=gene-E3V84_02445;Dbxref=NCBI_GP:TMR47932.1;Name=TMR47932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446681.1;locus_tag=E3V84_02445;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR47932.1;transl_table=11 SOQE01000014.1 Genbank gene 10658 11491 . - . ID=gene-E3V84_02450;Name=E3V84_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02450 SOQE01000014.1 Protein Homology CDS 10658 11491 . - 0 ID=cds-TMR47933.1;Parent=gene-E3V84_02450;Dbxref=NCBI_GP:TMR47933.1;Name=TMR47933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446682.1;locus_tag=E3V84_02450;product=metallophosphoesterase;protein_id=TMR47933.1;transl_table=11 SOQE01000014.1 Genbank gene 11481 13325 . - . ID=gene-E3V84_02455;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=E3V84_02455 SOQE01000014.1 Protein Homology CDS 11481 13325 . - 0 ID=cds-TMR47934.1;Parent=gene-E3V84_02455;Dbxref=NCBI_GP:TMR47934.1;Name=TMR47934.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358137.1;locus_tag=E3V84_02455;product=excinuclease ABC subunit UvrC;protein_id=TMR47934.1;transl_table=11 SOQE01000014.1 Genbank gene 13365 14066 . - . ID=gene-E3V84_02460;Name=E3V84_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02460 SOQE01000014.1 Protein Homology CDS 13365 14066 . - 0 ID=cds-TMR47935.1;Parent=gene-E3V84_02460;Dbxref=NCBI_GP:TMR47935.1;Name=TMR47935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446684.1;locus_tag=E3V84_02460;product=matrixin family metalloprotease;protein_id=TMR47935.1;transl_table=11 SOQE01000014.1 Genbank gene 14145 15377 . - . ID=gene-E3V84_02465;Name=murN;gbkey=Gene;gene=murN;gene_biotype=protein_coding;locus_tag=E3V84_02465 SOQE01000014.1 Protein Homology CDS 14145 15377 . - 0 ID=cds-TMR47936.1;Parent=gene-E3V84_02465;Dbxref=NCBI_GP:TMR47936.1;Name=TMR47936.1;gbkey=CDS;gene=murN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358135.1;locus_tag=E3V84_02465;product=peptidoglycan bridge formation alanyltransferase MurN;protein_id=TMR47936.1;transl_table=11 SOQE01000014.1 Genbank gene 15382 16602 . - . ID=gene-E3V84_02470;Name=E3V84_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02470 SOQE01000014.1 Protein Homology CDS 15382 16602 . - 0 ID=cds-TMR47937.1;Parent=gene-E3V84_02470;Dbxref=NCBI_GP:TMR47937.1;Name=TMR47937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358134.1;locus_tag=E3V84_02470;product=aminoacyltransferase;protein_id=TMR47937.1;transl_table=11 SOQE01000014.1 Genbank gene 16714 17493 . - . ID=gene-E3V84_02475;Name=E3V84_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02475 SOQE01000014.1 Protein Homology CDS 16714 17493 . - 0 ID=cds-TMR47938.1;Parent=gene-E3V84_02475;Dbxref=NCBI_GP:TMR47938.1;Name=TMR47938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446687.1;locus_tag=E3V84_02475;product=esterase family protein;protein_id=TMR47938.1;transl_table=11 SOQE01000014.1 Genbank gene 17561 19222 . - . ID=gene-E3V84_02480;Name=E3V84_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02480 SOQE01000014.1 Protein Homology CDS 17561 19222 . - 0 ID=cds-TMR47939.1;Parent=gene-E3V84_02480;Dbxref=NCBI_GP:TMR47939.1;Name=TMR47939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446688.1;locus_tag=E3V84_02480;product=ribonuclease J;protein_id=TMR47939.1;transl_table=11 SOQE01000014.1 Genbank gene 19396 21630 . - . ID=gene-E3V84_02485;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=E3V84_02485 SOQE01000014.1 Protein Homology CDS 19396 21630 . - 0 ID=cds-TMR47940.1;Parent=gene-E3V84_02485;Dbxref=NCBI_GP:TMR47940.1;Name=TMR47940.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358131.1;locus_tag=E3V84_02485;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TMR47940.1;transl_table=11 SOQE01000014.1 Genbank gene 21795 22652 . + . ID=gene-E3V84_02490;Name=E3V84_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02490 SOQE01000014.1 Protein Homology CDS 21795 22652 . + 0 ID=cds-TMR47941.1;Parent=gene-E3V84_02490;Dbxref=NCBI_GP:TMR47941.1;Name=TMR47941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229572.1;locus_tag=E3V84_02490;product=ATP-binding cassette domain-containing protein;protein_id=TMR47941.1;transl_table=11 SOQE01000014.1 Genbank gene 22662 23321 . + . ID=gene-E3V84_02495;Name=E3V84_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02495 SOQE01000014.1 Protein Homology CDS 22662 23321 . + 0 ID=cds-TMR47942.1;Parent=gene-E3V84_02495;Dbxref=NCBI_GP:TMR47942.1;Name=TMR47942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446693.1;locus_tag=E3V84_02495;product=amino acid ABC transporter permease;protein_id=TMR47942.1;transl_table=11 SOQE01000014.1 Genbank gene 23738 24940 . + . ID=gene-E3V84_02500;Name=E3V84_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02500 SOQE01000014.1 Protein Homology CDS 23738 24940 . + 0 ID=cds-TMR47943.1;Parent=gene-E3V84_02500;Dbxref=NCBI_GP:TMR47943.1;Name=TMR47943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358125.1;locus_tag=E3V84_02500;product=oxidoreductase;protein_id=TMR47943.1;transl_table=11 SOQE01000014.1 Genbank gene 25080 25168 . - . ID=gene-E3V84_02505;Name=E3V84_02505;end_range=25168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02505;partial=true SOQE01000014.1 Protein Homology CDS 25080 25168 . - 2 ID=cds-TMR47944.1;Parent=gene-E3V84_02505;Dbxref=NCBI_GP:TMR47944.1;Name=TMR47944.1;end_range=25168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_02505;partial=true;product=IS200/IS605 family transposase;protein_id=TMR47944.1;transl_table=11 ##sequence-region SOQE01000015.1 1 10408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000015.1 Genbank region 1 10408 . + . ID=SOQE01000015.1:1..10408;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000015.1 Genbank gene 1 61 . - . ID=gene-E3V84_02510;Name=E3V84_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02510;partial=true;start_range=.,1 SOQE01000015.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR47918.1;Parent=gene-E3V84_02510;Dbxref=NCBI_GP:TMR47918.1;Name=TMR47918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_02510;partial=true;product=IS200/IS605 family transposase;protein_id=TMR47918.1;start_range=.,1;transl_table=11 SOQE01000015.1 Genbank pseudogene 201 1187 . - . ID=gene-E3V84_02515;Name=E3V84_02515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02515;pseudo=true SOQE01000015.1 Protein Homology CDS 201 1187 . - 0 ID=cds-E3V84_02515;Parent=gene-E3V84_02515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445534.1;locus_tag=E3V84_02515;product=DNA primase;pseudo=true;transl_table=11 SOQE01000015.1 Genbank gene 1459 2262 . - . ID=gene-E3V84_02520;Name=E3V84_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02520 SOQE01000015.1 Protein Homology CDS 1459 2262 . - 0 ID=cds-TMR47911.1;Parent=gene-E3V84_02520;Dbxref=NCBI_GP:TMR47911.1;Name=TMR47911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358088.1;locus_tag=E3V84_02520;product=cell filamentation protein Fic;protein_id=TMR47911.1;transl_table=11 SOQE01000015.1 Genbank gene 2619 3185 . - . ID=gene-E3V84_02525;Name=E3V84_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02525 SOQE01000015.1 Protein Homology CDS 2619 3185 . - 0 ID=cds-TMR47912.1;Parent=gene-E3V84_02525;Dbxref=NCBI_GP:TMR47912.1;Name=TMR47912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253751.1;locus_tag=E3V84_02525;product=hypothetical protein;protein_id=TMR47912.1;transl_table=11 SOQE01000015.1 Genbank gene 3175 4518 . - . ID=gene-E3V84_02530;Name=E3V84_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02530 SOQE01000015.1 Protein Homology CDS 3175 4518 . - 0 ID=cds-TMR47913.1;Parent=gene-E3V84_02530;Dbxref=NCBI_GP:TMR47913.1;Name=TMR47913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778677.1;locus_tag=E3V84_02530;product=ATP-binding protein;protein_id=TMR47913.1;transl_table=11 SOQE01000015.1 Genbank gene 4625 7276 . - . ID=gene-E3V84_02535;Name=E3V84_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02535 SOQE01000015.1 Protein Homology CDS 4625 7276 . - 0 ID=cds-TMR47914.1;Parent=gene-E3V84_02535;Dbxref=NCBI_GP:TMR47914.1;Name=TMR47914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732359.1;locus_tag=E3V84_02535;product=valine--tRNA ligase;protein_id=TMR47914.1;transl_table=11 SOQE01000015.1 Genbank gene 7403 8404 . - . ID=gene-E3V84_02540;Name=E3V84_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02540 SOQE01000015.1 Protein Homology CDS 7403 8404 . - 0 ID=cds-TMR47915.1;Parent=gene-E3V84_02540;Dbxref=NCBI_GP:TMR47915.1;Name=TMR47915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147018.1;locus_tag=E3V84_02540;product=cell filamentation protein Fic;protein_id=TMR47915.1;transl_table=11 SOQE01000015.1 Genbank gene 8436 9677 . - . ID=gene-E3V84_02545;Name=E3V84_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02545 SOQE01000015.1 Protein Homology CDS 8436 9677 . - 0 ID=cds-TMR47916.1;Parent=gene-E3V84_02545;Dbxref=NCBI_GP:TMR47916.1;Name=TMR47916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085117.1;locus_tag=E3V84_02545;product=hypothetical protein;protein_id=TMR47916.1;transl_table=11 SOQE01000015.1 Genbank gene 9976 10408 . - . ID=gene-E3V84_02550;Name=E3V84_02550;end_range=10408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02550;partial=true SOQE01000015.1 Protein Homology CDS 9976 10408 . - 1 ID=cds-TMR47917.1;Parent=gene-E3V84_02550;Dbxref=NCBI_GP:TMR47917.1;Name=TMR47917.1;end_range=10408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284867.1;locus_tag=E3V84_02550;partial=true;product=beta-carotene 15%2C15'-monooxygenase;protein_id=TMR47917.1;transl_table=11 ##sequence-region SOQE01000016.1 1 26401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000016.1 Genbank region 1 26401 . + . ID=SOQE01000016.1:1..26401;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000016.1 Genbank gene 260 448 . + . ID=gene-E3V84_02555;Name=E3V84_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02555 SOQE01000016.1 Protein Homology CDS 260 448 . + 0 ID=cds-TMR47881.1;Parent=gene-E3V84_02555;Dbxref=NCBI_GP:TMR47881.1;Name=TMR47881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=E3V84_02555;product=50S ribosomal protein L28;protein_id=TMR47881.1;transl_table=11 SOQE01000016.1 Genbank gene 603 968 . + . ID=gene-E3V84_02560;Name=E3V84_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02560 SOQE01000016.1 Protein Homology CDS 603 968 . + 0 ID=cds-TMR47882.1;Parent=gene-E3V84_02560;Dbxref=NCBI_GP:TMR47882.1;Name=TMR47882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=E3V84_02560;product=Asp23/Gls24 family envelope stress response protein;protein_id=TMR47882.1;transl_table=11 SOQE01000016.1 Genbank gene 971 2638 . + . ID=gene-E3V84_02565;Name=E3V84_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02565 SOQE01000016.1 Protein Homology CDS 971 2638 . + 0 ID=cds-TMR47883.1;Parent=gene-E3V84_02565;Dbxref=NCBI_GP:TMR47883.1;Name=TMR47883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446926.1;locus_tag=E3V84_02565;product=DAK2 domain-containing protein;protein_id=TMR47883.1;transl_table=11 SOQE01000016.1 Genbank gene 2844 4544 . + . ID=gene-E3V84_02570;Name=E3V84_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02570 SOQE01000016.1 Protein Homology CDS 2844 4544 . + 0 ID=cds-TMR47884.1;Parent=gene-E3V84_02570;Dbxref=NCBI_GP:TMR47884.1;Name=TMR47884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446925.1;locus_tag=E3V84_02570;product=acetolactate synthase large subunit;protein_id=TMR47884.1;transl_table=11 SOQE01000016.1 Genbank gene 4537 5013 . + . ID=gene-E3V84_02575;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=E3V84_02575 SOQE01000016.1 Protein Homology CDS 4537 5013 . + 0 ID=cds-TMR47885.1;Parent=gene-E3V84_02575;Dbxref=NCBI_GP:TMR47885.1;Name=TMR47885.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=E3V84_02575;product=acetolactate synthase small subunit;protein_id=TMR47885.1;transl_table=11 SOQE01000016.1 Genbank gene 5079 6101 . + . ID=gene-E3V84_02580;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=E3V84_02580 SOQE01000016.1 Protein Homology CDS 5079 6101 . + 0 ID=cds-TMR47886.1;Parent=gene-E3V84_02580;Dbxref=NCBI_GP:TMR47886.1;Name=TMR47886.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010246.1;locus_tag=E3V84_02580;product=ketol-acid reductoisomerase;protein_id=TMR47886.1;transl_table=11 SOQE01000016.1 Genbank gene 6186 6542 . + . ID=gene-E3V84_02585;Name=E3V84_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02585 SOQE01000016.1 Protein Homology CDS 6186 6542 . + 0 ID=cds-TMR47887.1;Parent=gene-E3V84_02585;Dbxref=NCBI_GP:TMR47887.1;Name=TMR47887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357999.1;locus_tag=E3V84_02585;product=ketol-acid reductoisomerase;protein_id=TMR47887.1;transl_table=11 SOQE01000016.1 Genbank gene 6593 7843 . + . ID=gene-E3V84_02590;Name=E3V84_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02590 SOQE01000016.1 Protein Homology CDS 6593 7843 . + 0 ID=cds-TMR47888.1;Parent=gene-E3V84_02590;Dbxref=NCBI_GP:TMR47888.1;Name=TMR47888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446922.1;locus_tag=E3V84_02590;product=threonine dehydratase;protein_id=TMR47888.1;transl_table=11 SOQE01000016.1 Genbank gene 8673 8888 . + . ID=gene-E3V84_02595;Name=E3V84_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02595 SOQE01000016.1 Protein Homology CDS 8673 8888 . + 0 ID=cds-TMR47889.1;Parent=gene-E3V84_02595;Dbxref=NCBI_GP:TMR47889.1;Name=TMR47889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446921.1;locus_tag=E3V84_02595;product=hypothetical protein;protein_id=TMR47889.1;transl_table=11 SOQE01000016.1 Genbank gene 8997 9737 . - . ID=gene-E3V84_02600;Name=E3V84_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02600 SOQE01000016.1 Protein Homology CDS 8997 9737 . - 0 ID=cds-TMR47890.1;Parent=gene-E3V84_02600;Dbxref=NCBI_GP:TMR47890.1;Name=TMR47890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358002.1;locus_tag=E3V84_02600;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR47890.1;transl_table=11 SOQE01000016.1 Genbank gene 9737 11302 . - . ID=gene-E3V84_02605;Name=E3V84_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02605 SOQE01000016.1 Protein Homology CDS 9737 11302 . - 0 ID=cds-TMR47891.1;Parent=gene-E3V84_02605;Dbxref=NCBI_GP:TMR47891.1;Name=TMR47891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358003.2;locus_tag=E3V84_02605;product=transporter substrate-binding domain-containing protein;protein_id=TMR47891.1;transl_table=11 SOQE01000016.1 Genbank gene 11440 13329 . + . ID=gene-E3V84_02610;Name=E3V84_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02610 SOQE01000016.1 Protein Homology CDS 11440 13329 . + 0 ID=cds-TMR47892.1;Parent=gene-E3V84_02610;Dbxref=NCBI_GP:TMR47892.1;Name=TMR47892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446918.1;locus_tag=E3V84_02610;product=DUF2207 domain-containing protein;protein_id=TMR47892.1;transl_table=11 SOQE01000016.1 Genbank pseudogene 13389 14355 . + . ID=gene-E3V84_02615;Name=E3V84_02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02615;pseudo=true SOQE01000016.1 Protein Homology CDS 13389 14355 . + 0 ID=cds-E3V84_02615;Parent=gene-E3V84_02615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001851140.1;locus_tag=E3V84_02615;product=undecaprenyl-diphosphate phosphatase;pseudo=true;transl_table=11 SOQE01000016.1 Genbank gene 14381 15442 . - . ID=gene-E3V84_02620;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=E3V84_02620 SOQE01000016.1 Protein Homology CDS 14381 15442 . - 0 ID=cds-TMR47893.1;Parent=gene-E3V84_02620;Dbxref=NCBI_GP:TMR47893.1;Name=TMR47893.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446916.1;locus_tag=E3V84_02620;product=DNA polymerase IV;protein_id=TMR47893.1;transl_table=11 SOQE01000016.1 Genbank gene 15681 18005 . + . ID=gene-E3V84_02625;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=E3V84_02625 SOQE01000016.1 Protein Homology CDS 15681 18005 . + 0 ID=cds-TMR47894.1;Parent=gene-E3V84_02625;Dbxref=NCBI_GP:TMR47894.1;Name=TMR47894.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358009.1;locus_tag=E3V84_02625;product=formate C-acetyltransferase;protein_id=TMR47894.1;transl_table=11 SOQE01000016.1 Genbank gene 18245 18331 . - . ID=gene-E3V84_02630;Name=E3V84_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02630 SOQE01000016.1 Protein Homology CDS 18245 18331 . - 0 ID=cds-TMR47901.1;Parent=gene-E3V84_02630;Dbxref=NCBI_GP:TMR47901.1;Name=TMR47901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822400.1;locus_tag=E3V84_02630;product=DNA alkylation repair protein;protein_id=TMR47901.1;transl_table=11 SOQE01000016.1 Genbank pseudogene 18473 19657 . - . ID=gene-E3V84_02635;Name=E3V84_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02635;pseudo=true SOQE01000016.1 Protein Homology CDS 18473 19657 . - 0 ID=cds-E3V84_02635;Parent=gene-E3V84_02635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358020.1;locus_tag=E3V84_02635;product=TrkH family potassium uptake protein;pseudo=true;transl_table=11 SOQE01000016.1 Genbank gene 19661 21010 . - . ID=gene-E3V84_02640;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=E3V84_02640 SOQE01000016.1 Protein Homology CDS 19661 21010 . - 0 ID=cds-TMR47895.1;Parent=gene-E3V84_02640;Dbxref=NCBI_GP:TMR47895.1;Name=TMR47895.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358021.1;locus_tag=E3V84_02640;product=Trk system potassium transporter TrkA;protein_id=TMR47895.1;transl_table=11 SOQE01000016.1 Genbank gene 21197 22045 . + . ID=gene-E3V84_02645;Name=E3V84_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02645 SOQE01000016.1 Protein Homology CDS 21197 22045 . + 0 ID=cds-TMR47896.1;Parent=gene-E3V84_02645;Dbxref=NCBI_GP:TMR47896.1;Name=TMR47896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862942.1;locus_tag=E3V84_02645;product=DNA-directed RNA polymerase subunit delta;protein_id=TMR47896.1;transl_table=11 SOQE01000016.1 Genbank gene 22060 22608 . + . ID=gene-E3V84_02650;Name=E3V84_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02650 SOQE01000016.1 Protein Homology CDS 22060 22608 . + 0 ID=cds-TMR47897.1;Parent=gene-E3V84_02650;Dbxref=NCBI_GP:TMR47897.1;Name=TMR47897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358023.1;locus_tag=E3V84_02650;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=TMR47897.1;transl_table=11 SOQE01000016.1 Genbank gene 22974 24656 . + . ID=gene-E3V84_02655;Name=E3V84_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02655 SOQE01000016.1 Protein Homology CDS 22974 24656 . + 0 ID=cds-TMR47898.1;Parent=gene-E3V84_02655;Dbxref=NCBI_GP:TMR47898.1;Name=TMR47898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358024.1;locus_tag=E3V84_02655;product=ABC transporter ATP-binding protein;protein_id=TMR47898.1;transl_table=11 SOQE01000016.1 Genbank gene 24641 25471 . + . ID=gene-E3V84_02660;Name=E3V84_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02660 SOQE01000016.1 Protein Homology CDS 24641 25471 . + 0 ID=cds-TMR47899.1;Parent=gene-E3V84_02660;Dbxref=NCBI_GP:TMR47899.1;Name=TMR47899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358025.1;locus_tag=E3V84_02660;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TMR47899.1;transl_table=11 SOQE01000016.1 Genbank gene 25664 26167 . + . ID=gene-E3V84_02665;Name=E3V84_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02665 SOQE01000016.1 Protein Homology CDS 25664 26167 . + 0 ID=cds-TMR47900.1;Parent=gene-E3V84_02665;Dbxref=NCBI_GP:TMR47900.1;Name=TMR47900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446908.1;locus_tag=E3V84_02665;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=TMR47900.1;transl_table=11 SOQE01000016.1 Genbank gene 26313 26401 . - . ID=gene-E3V84_02670;Name=E3V84_02670;end_range=26401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02670;partial=true SOQE01000016.1 Protein Homology CDS 26313 26401 . - 2 ID=cds-TMR47902.1;Parent=gene-E3V84_02670;Dbxref=NCBI_GP:TMR47902.1;Name=TMR47902.1;end_range=26401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_02670;partial=true;product=IS200/IS605 family transposase;protein_id=TMR47902.1;transl_table=11 ##sequence-region SOQE01000017.1 1 3967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000017.1 Genbank region 1 3967 . + . ID=SOQE01000017.1:1..3967;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000017.1 Genbank gene 261 1589 . + . ID=gene-E3V84_02675;Name=E3V84_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02675 SOQE01000017.1 Protein Homology CDS 261 1589 . + 0 ID=cds-TMR47875.1;Parent=gene-E3V84_02675;Dbxref=NCBI_GP:TMR47875.1;Name=TMR47875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750730.1;locus_tag=E3V84_02675;product=trypsin-like serine protease;protein_id=TMR47875.1;transl_table=11 SOQE01000017.1 Genbank gene 1607 2599 . + . ID=gene-E3V84_02680;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=protein_coding;locus_tag=E3V84_02680 SOQE01000017.1 Protein Homology CDS 1607 2599 . + 0 ID=cds-TMR47876.1;Parent=gene-E3V84_02680;Dbxref=NCBI_GP:TMR47876.1;Name=TMR47876.1;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V84_02680;product=choline-binding protein CbpJ;protein_id=TMR47876.1;transl_table=11 SOQE01000017.1 Genbank pseudogene 2746 3509 . + . ID=gene-E3V84_02685;Name=E3V84_02685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02685;pseudo=true SOQE01000017.1 Protein Homology CDS 2746 3509 . + 0 ID=cds-E3V84_02685;Parent=gene-E3V84_02685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V84_02685;product=IS3 family transposase;pseudo=true;transl_table=11 SOQE01000017.1 Genbank gene 3515 3967 . - . ID=gene-E3V84_02690;Name=E3V84_02690;end_range=3967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02690;partial=true SOQE01000017.1 Protein Homology CDS 3515 3967 . - 0 ID=cds-TMR47877.1;Parent=gene-E3V84_02690;Dbxref=NCBI_GP:TMR47877.1;Name=TMR47877.1;end_range=3967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_02690;partial=true;product=IS630 family transposase;protein_id=TMR47877.1;transl_table=11 ##sequence-region SOQE01000018.1 1 1483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000018.1 Genbank region 1 1483 . + . ID=SOQE01000018.1:1..1483;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000018.1 Genbank pseudogene 541 682 . + . ID=gene-E3V84_02695;Name=E3V84_02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02695;pseudo=true SOQE01000018.1 Protein Homology CDS 541 682 . + 0 ID=cds-E3V84_02695;Parent=gene-E3V84_02695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_02695;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000018.1 Genbank gene 717 1483 . - . ID=gene-E3V84_02700;Name=E3V84_02700;end_range=1483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02700;partial=true SOQE01000018.1 Protein Homology CDS 717 1483 . - 2 ID=cds-TMR47873.1;Parent=gene-E3V84_02700;Dbxref=NCBI_GP:TMR47873.1;Name=TMR47873.1;end_range=1483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V84_02700;partial=true;product=IS66 family transposase;protein_id=TMR47873.1;transl_table=11 ##sequence-region SOQE01000019.1 1 29801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000019.1 Genbank region 1 29801 . + . ID=SOQE01000019.1:1..29801;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000019.1 Genbank gene 1 423 . + . ID=gene-E3V84_02705;Name=E3V84_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02705;partial=true;start_range=.,1 SOQE01000019.1 Protein Homology CDS 1 423 . + 0 ID=cds-TMR47840.1;Parent=gene-E3V84_02705;Dbxref=NCBI_GP:TMR47840.1;Name=TMR47840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_02705;partial=true;product=IS630 family transposase;protein_id=TMR47840.1;start_range=.,1;transl_table=11 SOQE01000019.1 Genbank pseudogene 456 951 . - . ID=gene-E3V84_02710;Name=E3V84_02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02710;pseudo=true SOQE01000019.1 Protein Homology CDS 456 951 . - 0 ID=cds-E3V84_02710;Parent=gene-E3V84_02710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_02710;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000019.1 Genbank gene 1159 1353 . + . ID=gene-E3V84_02715;Name=E3V84_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02715 SOQE01000019.1 Protein Homology CDS 1159 1353 . + 0 ID=cds-TMR47841.1;Parent=gene-E3V84_02715;Dbxref=NCBI_GP:TMR47841.1;Name=TMR47841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446869.1;locus_tag=E3V84_02715;product=transcriptional regulator;protein_id=TMR47841.1;transl_table=11 SOQE01000019.1 Genbank pseudogene 1369 1910 . + . ID=gene-E3V84_02720;Name=E3V84_02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02720;pseudo=true SOQE01000019.1 Protein Homology CDS 1369 1910 . + 0 ID=cds-E3V84_02720;Parent=gene-E3V84_02720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446870.1;locus_tag=E3V84_02720;product=DUF3278 domain-containing protein;pseudo=true;transl_table=11 SOQE01000019.1 Genbank gene 1921 2163 . + . ID=gene-E3V84_02725;Name=E3V84_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02725 SOQE01000019.1 Protein Homology CDS 1921 2163 . + 0 ID=cds-TMR47842.1;Parent=gene-E3V84_02725;Dbxref=NCBI_GP:TMR47842.1;Name=TMR47842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357894.1;locus_tag=E3V84_02725;product=hypothetical protein;protein_id=TMR47842.1;transl_table=11 SOQE01000019.1 Genbank gene 2174 2500 . + . ID=gene-E3V84_02730;Name=E3V84_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02730 SOQE01000019.1 Protein Homology CDS 2174 2500 . + 0 ID=cds-TMR47843.1;Parent=gene-E3V84_02730;Dbxref=NCBI_GP:TMR47843.1;Name=TMR47843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838777.1;locus_tag=E3V84_02730;product=hypothetical protein;protein_id=TMR47843.1;transl_table=11 SOQE01000019.1 Genbank gene 2527 3105 . + . ID=gene-E3V84_02735;Name=E3V84_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02735 SOQE01000019.1 Protein Homology CDS 2527 3105 . + 0 ID=cds-TMR47844.1;Parent=gene-E3V84_02735;Dbxref=NCBI_GP:TMR47844.1;Name=TMR47844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446872.1;locus_tag=E3V84_02735;product=DUF3278 domain-containing protein;protein_id=TMR47844.1;transl_table=11 SOQE01000019.1 Genbank gene 3102 3578 . + . ID=gene-E3V84_02740;Name=E3V84_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02740 SOQE01000019.1 Protein Homology CDS 3102 3578 . + 0 ID=cds-TMR47845.1;Parent=gene-E3V84_02740;Dbxref=NCBI_GP:TMR47845.1;Name=TMR47845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446873.1;locus_tag=E3V84_02740;product=glutathione peroxidase;protein_id=TMR47845.1;transl_table=11 SOQE01000019.1 Genbank gene 3800 6013 . - . ID=gene-E3V84_02745;Name=E3V84_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02745 SOQE01000019.1 Protein Homology CDS 3800 6013 . - 0 ID=cds-TMR47846.1;Parent=gene-E3V84_02745;Dbxref=NCBI_GP:TMR47846.1;Name=TMR47846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357878.1;locus_tag=E3V84_02745;product=alpha-xylosidase;protein_id=TMR47846.1;transl_table=11 SOQE01000019.1 Genbank gene 6253 6864 . - . ID=gene-E3V84_02750;Name=E3V84_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02750 SOQE01000019.1 Protein Homology CDS 6253 6864 . - 0 ID=cds-TMR47847.1;Parent=gene-E3V84_02750;Dbxref=NCBI_GP:TMR47847.1;Name=TMR47847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595241.1;locus_tag=E3V84_02750;product=cell filamentation protein Fic;protein_id=TMR47847.1;transl_table=11 SOQE01000019.1 Genbank gene 6864 7040 . - . ID=gene-E3V84_02755;Name=E3V84_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02755 SOQE01000019.1 Protein Homology CDS 6864 7040 . - 0 ID=cds-TMR47848.1;Parent=gene-E3V84_02755;Dbxref=NCBI_GP:TMR47848.1;Name=TMR47848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050754.1;locus_tag=E3V84_02755;product=hypothetical protein;protein_id=TMR47848.1;transl_table=11 SOQE01000019.1 Genbank gene 7299 7664 . - . ID=gene-E3V84_02760;Name=E3V84_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02760 SOQE01000019.1 Protein Homology CDS 7299 7664 . - 0 ID=cds-TMR47849.1;Parent=gene-E3V84_02760;Dbxref=NCBI_GP:TMR47849.1;Name=TMR47849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357869.1;locus_tag=E3V84_02760;product=antibiotic biosynthesis monooxygenase;protein_id=TMR47849.1;transl_table=11 SOQE01000019.1 Genbank gene 7713 9149 . - . ID=gene-E3V84_02765;Name=E3V84_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02765 SOQE01000019.1 Protein Homology CDS 7713 9149 . - 0 ID=cds-TMR47850.1;Parent=gene-E3V84_02765;Dbxref=NCBI_GP:TMR47850.1;Name=TMR47850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033146.1;locus_tag=E3V84_02765;product=glycoside hydrolase family 1 protein;protein_id=TMR47850.1;transl_table=11 SOQE01000019.1 Genbank gene 9257 10138 . + . ID=gene-E3V84_02770;Name=E3V84_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02770 SOQE01000019.1 Protein Homology CDS 9257 10138 . + 0 ID=cds-TMR47851.1;Parent=gene-E3V84_02770;Dbxref=NCBI_GP:TMR47851.1;Name=TMR47851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609060.1;locus_tag=E3V84_02770;product=AraC family transcriptional regulator;protein_id=TMR47851.1;transl_table=11 SOQE01000019.1 Genbank gene 10235 11074 . + . ID=gene-E3V84_02775;Name=E3V84_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02775 SOQE01000019.1 Protein Homology CDS 10235 11074 . + 0 ID=cds-TMR47852.1;Parent=gene-E3V84_02775;Dbxref=NCBI_GP:TMR47852.1;Name=TMR47852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372110.1;locus_tag=E3V84_02775;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR47852.1;transl_table=11 SOQE01000019.1 Genbank pseudogene 11104 11685 . + . ID=gene-E3V84_02780;Name=E3V84_02780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02780;pseudo=true SOQE01000019.1 Protein Homology CDS 11104 11685 . + 0 ID=cds-E3V84_02780;Parent=gene-E3V84_02780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030523.1;locus_tag=E3V84_02780;product=histidine phosphatase family protein;pseudo=true;transl_table=11 SOQE01000019.1 Genbank gene 11782 12597 . - . ID=gene-E3V84_02785;Name=E3V84_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02785 SOQE01000019.1 Protein Homology CDS 11782 12597 . - 0 ID=cds-TMR47853.1;Parent=gene-E3V84_02785;Dbxref=NCBI_GP:TMR47853.1;Name=TMR47853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372516.1;locus_tag=E3V84_02785;product=PRD domain-containing protein;protein_id=TMR47853.1;transl_table=11 SOQE01000019.1 Genbank gene 12681 14573 . - . ID=gene-E3V84_02790;Name=E3V84_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02790 SOQE01000019.1 Protein Homology CDS 12681 14573 . - 0 ID=cds-TMR47854.1;Parent=gene-E3V84_02790;Dbxref=NCBI_GP:TMR47854.1;Name=TMR47854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008378661.1;locus_tag=E3V84_02790;product=PTS beta-glucoside transporter subunit EIIBCA;protein_id=TMR47854.1;transl_table=11 SOQE01000019.1 Genbank pseudogene 14863 14940 . - . ID=gene-E3V84_02795;Name=E3V84_02795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02795;pseudo=true SOQE01000019.1 Protein Homology CDS 14863 14940 . - 0 ID=cds-E3V84_02795;Parent=gene-E3V84_02795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809593.1;locus_tag=E3V84_02795;product=cytidylate kinase;pseudo=true;transl_table=11 SOQE01000019.1 Genbank gene 15519 16754 . + . ID=gene-E3V84_02800;Name=E3V84_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02800 SOQE01000019.1 Protein Homology CDS 15519 16754 . + 0 ID=cds-TMR47855.1;Parent=gene-E3V84_02800;Dbxref=NCBI_GP:TMR47855.1;Name=TMR47855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446879.1;locus_tag=E3V84_02800;product=ATP-binding protein;protein_id=TMR47855.1;transl_table=11 SOQE01000019.1 Genbank gene 17156 18019 . - . ID=gene-E3V84_02805;Name=E3V84_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02805 SOQE01000019.1 Protein Homology CDS 17156 18019 . - 0 ID=cds-TMR47856.1;Parent=gene-E3V84_02805;Dbxref=NCBI_GP:TMR47856.1;Name=TMR47856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446457.1;locus_tag=E3V84_02805;product=XRE family transcriptional regulator;protein_id=TMR47856.1;transl_table=11 SOQE01000019.1 Genbank gene 18210 18380 . + . ID=gene-E3V84_02810;Name=E3V84_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02810 SOQE01000019.1 Protein Homology CDS 18210 18380 . + 0 ID=cds-TMR47857.1;Parent=gene-E3V84_02810;Dbxref=NCBI_GP:TMR47857.1;Name=TMR47857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359356.1;locus_tag=E3V84_02810;product=hypothetical protein;protein_id=TMR47857.1;transl_table=11 SOQE01000019.1 Genbank gene 18535 18723 . - . ID=gene-E3V84_02815;Name=E3V84_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02815 SOQE01000019.1 Protein Homology CDS 18535 18723 . - 0 ID=cds-TMR47862.1;Parent=gene-E3V84_02815;Dbxref=NCBI_GP:TMR47862.1;Name=TMR47862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809169.1;locus_tag=E3V84_02815;product=hypothetical protein;protein_id=TMR47862.1;transl_table=11 SOQE01000019.1 Genbank gene 19034 20305 . + . ID=gene-E3V84_02820;Name=E3V84_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02820 SOQE01000019.1 Protein Homology CDS 19034 20305 . + 0 ID=cds-TMR47858.1;Parent=gene-E3V84_02820;Dbxref=NCBI_GP:TMR47858.1;Name=TMR47858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750731.1;locus_tag=E3V84_02820;product=trypsin-like serine protease;protein_id=TMR47858.1;transl_table=11 SOQE01000019.1 Genbank gene 20324 21244 . + . ID=gene-E3V84_02825;Name=E3V84_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02825 SOQE01000019.1 Protein Homology CDS 20324 21244 . + 0 ID=cds-TMR47859.1;Parent=gene-E3V84_02825;Dbxref=NCBI_GP:TMR47859.1;Name=TMR47859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V84_02825;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR47859.1;transl_table=11 SOQE01000019.1 Genbank gene 21492 21905 . - . ID=gene-E3V84_02830;Name=E3V84_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02830 SOQE01000019.1 Protein Homology CDS 21492 21905 . - 0 ID=cds-TMR47860.1;Parent=gene-E3V84_02830;Dbxref=NCBI_GP:TMR47860.1;Name=TMR47860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359367.1;locus_tag=E3V84_02830;product=nucleoside-diphosphate kinase;protein_id=TMR47860.1;transl_table=11 SOQE01000019.1 Genbank gene 22014 25664 . - . ID=gene-E3V84_02835;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=E3V84_02835 SOQE01000019.1 Protein Homology CDS 22014 25664 . - 0 ID=cds-TMR47863.1;Parent=gene-E3V84_02835;Dbxref=NCBI_GP:TMR47863.1;Name=TMR47863.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446946.1;locus_tag=E3V84_02835;product=DNA-directed RNA polymerase subunit beta';protein_id=TMR47863.1;transl_table=11 SOQE01000019.1 Genbank gene 25730 29335 . - . ID=gene-E3V84_02840;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=E3V84_02840 SOQE01000019.1 Protein Homology CDS 25730 29335 . - 0 ID=cds-TMR47861.1;Parent=gene-E3V84_02840;Dbxref=NCBI_GP:TMR47861.1;Name=TMR47861.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446947.1;locus_tag=E3V84_02840;product=DNA-directed RNA polymerase subunit beta;protein_id=TMR47861.1;transl_table=11 ##sequence-region SOQE01000002.1 1 5268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000002.1 Genbank region 1 5268 . + . ID=SOQE01000002.1:1..5268;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000002.1 Genbank gene 1 395 . - . ID=gene-E3V84_00075;Name=E3V84_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00075;partial=true;start_range=.,1 SOQE01000002.1 Protein Homology CDS 1 395 . - 0 ID=cds-TMR48958.1;Parent=gene-E3V84_00075;Dbxref=NCBI_GP:TMR48958.1;Name=TMR48958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_00075;partial=true;product=IS630 family transposase;protein_id=TMR48958.1;start_range=.,1;transl_table=11 SOQE01000002.1 Genbank pseudogene 437 576 . - . ID=gene-E3V84_00080;Name=E3V84_00080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00080;pseudo=true SOQE01000002.1 Protein Homology CDS 437 576 . - 0 ID=cds-E3V84_00080;Parent=gene-E3V84_00080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_00080;product=transposase;pseudo=true;transl_table=11 SOQE01000002.1 Genbank pseudogene 785 1400 . + . ID=gene-E3V84_00085;Name=E3V84_00085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00085;pseudo=true SOQE01000002.1 Protein Homology CDS 785 1400 . + 0 ID=cds-E3V84_00085;Parent=gene-E3V84_00085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=E3V84_00085;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000002.1 Genbank pseudogene 1503 1610 . + . ID=gene-E3V84_00090;Name=E3V84_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00090;pseudo=true SOQE01000002.1 Protein Homology CDS 1503 1610 . + 0 ID=cds-E3V84_00090;Parent=gene-E3V84_00090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00090;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000002.1 Genbank pseudogene 1599 2343 . - . ID=gene-E3V84_00095;Name=E3V84_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00095;pseudo=true SOQE01000002.1 Protein Homology CDS 1599 2343 . - 0 ID=cds-E3V84_00095;Parent=gene-E3V84_00095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358917.1;locus_tag=E3V84_00095;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 SOQE01000002.1 Genbank gene 2639 4018 . + . ID=gene-E3V84_00100;Name=E3V84_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00100 SOQE01000002.1 Protein Homology CDS 2639 4018 . + 0 ID=cds-TMR48959.1;Parent=gene-E3V84_00100;Dbxref=NCBI_GP:TMR48959.1;Name=TMR48959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358916.1;locus_tag=E3V84_00100;product=NADH oxidase;protein_id=TMR48959.1;transl_table=11 SOQE01000002.1 Genbank gene 4696 5049 . + . ID=gene-E3V84_00105;Name=E3V84_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00105 SOQE01000002.1 Protein Homology CDS 4696 5049 . + 0 ID=cds-TMR48960.1;Parent=gene-E3V84_00105;Dbxref=NCBI_GP:TMR48960.1;Name=TMR48960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945719.1;locus_tag=E3V84_00105;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=TMR48960.1;transl_table=11 SOQE01000002.1 Genbank pseudogene 5086 5268 . + . ID=gene-E3V84_00110;Name=E3V84_00110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00110;pseudo=true SOQE01000002.1 Protein Homology CDS 5086 5268 . + 0 ID=cds-E3V84_00110;Parent=gene-E3V84_00110;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_00110;product=transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000020.1 1 34795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000020.1 Genbank region 1 34795 . + . ID=SOQE01000020.1:1..34795;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000020.1 Genbank gene 1 130 . - . ID=gene-E3V84_02845;Name=E3V84_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02845;partial=true;start_range=.,1 SOQE01000020.1 Protein Homology CDS 1 130 . - 0 ID=cds-TMR47776.1;Parent=gene-E3V84_02845;Dbxref=NCBI_GP:TMR47776.1;Name=TMR47776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13701.4;locus_tag=E3V84_02845;partial=true;product=IS1380 family transposase;protein_id=TMR47776.1;start_range=.,1;transl_table=11 SOQE01000020.1 Genbank gene 198 848 . - . ID=gene-E3V84_02850;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=E3V84_02850 SOQE01000020.1 Protein Homology CDS 198 848 . - 0 ID=cds-TMR47777.1;Parent=gene-E3V84_02850;Dbxref=NCBI_GP:TMR47777.1;Name=TMR47777.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359490.1;locus_tag=E3V84_02850;product=phosphate signaling complex protein PhoU;protein_id=TMR47777.1;transl_table=11 SOQE01000020.1 Genbank gene 863 1615 . - . ID=gene-E3V84_02855;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V84_02855 SOQE01000020.1 Protein Homology CDS 863 1615 . - 0 ID=cds-TMR47778.1;Parent=gene-E3V84_02855;Dbxref=NCBI_GP:TMR47778.1;Name=TMR47778.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003101281.1;locus_tag=E3V84_02855;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR47778.1;transl_table=11 SOQE01000020.1 Genbank gene 1617 2432 . - . ID=gene-E3V84_02860;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=E3V84_02860 SOQE01000020.1 Protein Homology CDS 1617 2432 . - 0 ID=cds-TMR47779.1;Parent=gene-E3V84_02860;Dbxref=NCBI_GP:TMR47779.1;Name=TMR47779.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359488.1;locus_tag=E3V84_02860;product=phosphate ABC transporter permease PstA;protein_id=TMR47779.1;transl_table=11 SOQE01000020.1 Genbank gene 2425 3288 . - . ID=gene-E3V84_02865;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=E3V84_02865 SOQE01000020.1 Protein Homology CDS 2425 3288 . - 0 ID=cds-TMR47780.1;Parent=gene-E3V84_02865;Dbxref=NCBI_GP:TMR47780.1;Name=TMR47780.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359487.1;locus_tag=E3V84_02865;product=phosphate ABC transporter permease subunit PstC;protein_id=TMR47780.1;transl_table=11 SOQE01000020.1 Genbank gene 3406 4281 . - . ID=gene-E3V84_02870;Name=E3V84_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02870 SOQE01000020.1 Protein Homology CDS 3406 4281 . - 0 ID=cds-TMR47781.1;Parent=gene-E3V84_02870;Dbxref=NCBI_GP:TMR47781.1;Name=TMR47781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669496.1;locus_tag=E3V84_02870;product=phosphate ABC transporter substrate-binding protein;protein_id=TMR47781.1;transl_table=11 SOQE01000020.1 Genbank gene 4448 5779 . - . ID=gene-E3V84_02875;Name=E3V84_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02875 SOQE01000020.1 Protein Homology CDS 4448 5779 . - 0 ID=cds-TMR47782.1;Parent=gene-E3V84_02875;Dbxref=NCBI_GP:TMR47782.1;Name=TMR47782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359485.1;locus_tag=E3V84_02875;product=two-component sensor histidine kinase;protein_id=TMR47782.1;transl_table=11 SOQE01000020.1 Genbank gene 5780 6487 . - . ID=gene-E3V84_02880;Name=E3V84_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02880 SOQE01000020.1 Protein Homology CDS 5780 6487 . - 0 ID=cds-TMR47783.1;Parent=gene-E3V84_02880;Dbxref=NCBI_GP:TMR47783.1;Name=TMR47783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359484.1;locus_tag=E3V84_02880;product=response regulator transcription factor;protein_id=TMR47783.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 6571 6711 . - . ID=gene-E3V84_02885;Name=E3V84_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02885;pseudo=true SOQE01000020.1 Protein Homology CDS 6571 6711 . - 0 ID=cds-E3V84_02885;Parent=gene-E3V84_02885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359483.1;locus_tag=E3V84_02885;product=cupin;pseudo=true;transl_table=11 SOQE01000020.1 Genbank pseudogene 6704 7216 . + . ID=gene-E3V84_02890;Name=E3V84_02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02890;pseudo=true SOQE01000020.1 Protein Homology CDS 6704 7216 . + 0 ID=cds-E3V84_02890;Parent=gene-E3V84_02890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_02890;product=transposase;pseudo=true;transl_table=11 SOQE01000020.1 Genbank gene 8055 9746 . - . ID=gene-E3V84_02895;Name=E3V84_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02895 SOQE01000020.1 Protein Homology CDS 8055 9746 . - 0 ID=cds-TMR47784.1;Parent=gene-E3V84_02895;Dbxref=NCBI_GP:TMR47784.1;Name=TMR47784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359481.1;locus_tag=E3V84_02895;product=arginine--tRNA ligase;protein_id=TMR47784.1;transl_table=11 SOQE01000020.1 Genbank gene 9882 10328 . + . ID=gene-E3V84_02900;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=E3V84_02900 SOQE01000020.1 Protein Homology CDS 9882 10328 . + 0 ID=cds-TMR47785.1;Parent=gene-E3V84_02900;Dbxref=NCBI_GP:TMR47785.1;Name=TMR47785.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445321.1;locus_tag=E3V84_02900;product=arginine repressor;protein_id=TMR47785.1;transl_table=11 SOQE01000020.1 Genbank gene 10379 12913 . + . ID=gene-E3V84_02905;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=E3V84_02905 SOQE01000020.1 Protein Homology CDS 10379 12913 . + 0 ID=cds-TMR47786.1;Parent=gene-E3V84_02905;Dbxref=NCBI_GP:TMR47786.1;Name=TMR47786.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445322.1;locus_tag=E3V84_02905;product=DNA mismatch repair protein MutS;protein_id=TMR47786.1;transl_table=11 SOQE01000020.1 Genbank gene 13059 14765 . + . ID=gene-E3V84_02910;Name=patA;gbkey=Gene;gene=patA;gene_biotype=protein_coding;locus_tag=E3V84_02910 SOQE01000020.1 Protein Homology CDS 13059 14765 . + 0 ID=cds-TMR47787.1;Parent=gene-E3V84_02910;Dbxref=NCBI_GP:TMR47787.1;Name=TMR47787.1;gbkey=CDS;gene=patA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445323.1;locus_tag=E3V84_02910;product=multidrug efflux ABC transporter subunit PatA;protein_id=TMR47787.1;transl_table=11 SOQE01000020.1 Genbank gene 14767 16533 . + . ID=gene-E3V84_02915;Name=patB;gbkey=Gene;gene=patB;gene_biotype=protein_coding;locus_tag=E3V84_02915 SOQE01000020.1 Protein Homology CDS 14767 16533 . + 0 ID=cds-TMR47788.1;Parent=gene-E3V84_02915;Dbxref=NCBI_GP:TMR47788.1;Name=TMR47788.1;gbkey=CDS;gene=patB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445324.1;locus_tag=E3V84_02915;product=multidrug efflux ABC transporter subunit PatB;protein_id=TMR47788.1;transl_table=11 SOQE01000020.1 Genbank gene 16822 17511 . + . ID=gene-E3V84_02920;Name=E3V84_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02920 SOQE01000020.1 Protein Homology CDS 16822 17511 . + 0 ID=cds-TMR47789.1;Parent=gene-E3V84_02920;Dbxref=NCBI_GP:TMR47789.1;Name=TMR47789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445325.1;locus_tag=E3V84_02920;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=TMR47789.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 17515 17680 . + . ID=gene-E3V84_02925;Name=E3V84_02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02925;pseudo=true SOQE01000020.1 Protein Homology CDS 17515 17680 . + 0 ID=cds-E3V84_02925;Parent=gene-E3V84_02925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359474.1;locus_tag=E3V84_02925;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000020.1 Genbank gene 17682 19031 . + . ID=gene-E3V84_02930;Name=E3V84_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02930 SOQE01000020.1 Protein Homology CDS 17682 19031 . + 0 ID=cds-TMR47790.1;Parent=gene-E3V84_02930;Dbxref=NCBI_GP:TMR47790.1;Name=TMR47790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445327.1;locus_tag=E3V84_02930;product=glucose-6-phosphate isomerase;protein_id=TMR47790.1;transl_table=11 SOQE01000020.1 Genbank gene 19214 20014 . + . ID=gene-E3V84_02935;Name=E3V84_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02935 SOQE01000020.1 Protein Homology CDS 19214 20014 . + 0 ID=cds-TMR47791.1;Parent=gene-E3V84_02935;Dbxref=NCBI_GP:TMR47791.1;Name=TMR47791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_720765.1;locus_tag=E3V84_02935;product=SDR family oxidoreductase;protein_id=TMR47791.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 20077 21903 . + . ID=gene-E3V84_02940;Name=E3V84_02940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02940;pseudo=true SOQE01000020.1 Protein Homology CDS 20077 21903 . + 0 ID=cds-E3V84_02940;Parent=gene-E3V84_02940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660254.1;locus_tag=E3V84_02940;product=PRD domain-containing protein;pseudo=true;transl_table=11 SOQE01000020.1 Genbank gene 21903 22382 . + . ID=gene-E3V84_02945;Name=E3V84_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02945 SOQE01000020.1 Protein Homology CDS 21903 22382 . + 0 ID=cds-TMR47792.1;Parent=gene-E3V84_02945;Dbxref=NCBI_GP:TMR47792.1;Name=TMR47792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192523.1;locus_tag=E3V84_02945;product=transcriptional regulator;protein_id=TMR47792.1;transl_table=11 SOQE01000020.1 Genbank gene 22398 22940 . + . ID=gene-E3V84_02950;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=E3V84_02950 SOQE01000020.1 Protein Homology CDS 22398 22940 . + 0 ID=cds-TMR47793.1;Parent=gene-E3V84_02950;Dbxref=NCBI_GP:TMR47793.1;Name=TMR47793.1;Note=catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_720768.1;locus_tag=E3V84_02950;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=TMR47793.1;transl_table=11 SOQE01000020.1 Genbank gene 22957 23937 . + . ID=gene-E3V84_02955;Name=E3V84_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02955 SOQE01000020.1 Protein Homology CDS 22957 23937 . + 0 ID=cds-TMR47794.1;Parent=gene-E3V84_02955;Dbxref=NCBI_GP:TMR47794.1;Name=TMR47794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377505.1;locus_tag=E3V84_02955;product=PTS sorbitol transporter subunit IIB;protein_id=TMR47794.1;transl_table=11 SOQE01000020.1 Genbank gene 24036 24407 . + . ID=gene-E3V84_02960;Name=E3V84_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02960 SOQE01000020.1 Protein Homology CDS 24036 24407 . + 0 ID=cds-TMR47795.1;Parent=gene-E3V84_02960;Dbxref=NCBI_GP:TMR47795.1;Name=TMR47795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808177.1;locus_tag=E3V84_02960;product=PTS sorbitol transporter subunit IIA;protein_id=TMR47795.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 24807 25283 . + . ID=gene-E3V84_02965;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=pseudogene;locus_tag=E3V84_02965;pseudo=true SOQE01000020.1 Protein Homology CDS 24807 25283 . + 0 ID=cds-E3V84_02965;Parent=gene-E3V84_02965;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445327.1;locus_tag=E3V84_02965;product=glucose-6-phosphate isomerase;pseudo=true;transl_table=11 SOQE01000020.1 Genbank gene 25414 26874 . + . ID=gene-E3V84_02970;Name=E3V84_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02970 SOQE01000020.1 Protein Homology CDS 25414 26874 . + 0 ID=cds-TMR47796.1;Parent=gene-E3V84_02970;Dbxref=NCBI_GP:TMR47796.1;Name=TMR47796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445328.1;locus_tag=E3V84_02970;product=glutamate--tRNA ligase;protein_id=TMR47796.1;transl_table=11 SOQE01000020.1 Genbank gene 26888 27322 . + . ID=gene-E3V84_02975;Name=E3V84_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02975 SOQE01000020.1 Protein Homology CDS 26888 27322 . + 0 ID=cds-TMR47797.1;Parent=gene-E3V84_02975;Dbxref=NCBI_GP:TMR47797.1;Name=TMR47797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359471.1;locus_tag=E3V84_02975;product=cytidine deaminase;protein_id=TMR47797.1;transl_table=11 SOQE01000020.1 Genbank gene 27436 27675 . + . ID=gene-E3V84_02980;Name=E3V84_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02980 SOQE01000020.1 Protein Homology CDS 27436 27675 . + 0 ID=cds-TMR47798.1;Parent=gene-E3V84_02980;Dbxref=NCBI_GP:TMR47798.1;Name=TMR47798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907299.1;locus_tag=E3V84_02980;product=hypothetical protein;protein_id=TMR47798.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 27994 29050 . + . ID=gene-E3V84_02985;Name=E3V84_02985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_02985;pseudo=true SOQE01000020.1 Protein Homology CDS 27994 29050 . + 0 ID=cds-E3V84_02985;Parent=gene-E3V84_02985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359457.1;locus_tag=E3V84_02985;product=alcohol dehydrogenase;pseudo=true;transl_table=11 SOQE01000020.1 Genbank gene 29201 29566 . + . ID=gene-E3V84_02990;Name=E3V84_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02990 SOQE01000020.1 Protein Homology CDS 29201 29566 . + 0 ID=cds-TMR47799.1;Parent=gene-E3V84_02990;Dbxref=NCBI_GP:TMR47799.1;Name=TMR47799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445357.1;locus_tag=E3V84_02990;product=DUF1033 family protein;protein_id=TMR47799.1;transl_table=11 SOQE01000020.1 Genbank gene 29642 30583 . + . ID=gene-E3V84_02995;Name=E3V84_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_02995 SOQE01000020.1 Protein Homology CDS 29642 30583 . + 0 ID=cds-TMR47800.1;Parent=gene-E3V84_02995;Dbxref=NCBI_GP:TMR47800.1;Name=TMR47800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359455.1;locus_tag=E3V84_02995;product=type II/IV secretion system protein;protein_id=TMR47800.1;transl_table=11 SOQE01000020.1 Genbank gene 30531 31547 . + . ID=gene-E3V84_03000;Name=E3V84_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03000 SOQE01000020.1 Protein Homology CDS 30531 31547 . + 0 ID=cds-TMR47806.1;Parent=gene-E3V84_03000;Dbxref=NCBI_GP:TMR47806.1;Name=TMR47806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355375.1;locus_tag=E3V84_03000;product=type II secretion system F family protein;protein_id=TMR47806.1;transl_table=11 SOQE01000020.1 Genbank gene 31549 31872 . + . ID=gene-E3V84_03005;Name=E3V84_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03005 SOQE01000020.1 Protein Homology CDS 31549 31872 . + 0 ID=cds-TMR47801.1;Parent=gene-E3V84_03005;Dbxref=NCBI_GP:TMR47801.1;Name=TMR47801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445360.1;locus_tag=E3V84_03005;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=TMR47801.1;transl_table=11 SOQE01000020.1 Genbank gene 31790 32269 . + . ID=gene-E3V84_03010;Name=E3V84_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03010 SOQE01000020.1 Protein Homology CDS 31790 32269 . + 0 ID=cds-TMR47802.1;Parent=gene-E3V84_03010;Dbxref=NCBI_GP:TMR47802.1;Name=TMR47802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445361.1;locus_tag=E3V84_03010;product=type II secretion system protein;protein_id=TMR47802.1;transl_table=11 SOQE01000020.1 Genbank gene 32274 32534 . + . ID=gene-E3V84_03015;Name=E3V84_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03015 SOQE01000020.1 Protein Homology CDS 32274 32534 . + 0 ID=cds-TMR47803.1;Parent=gene-E3V84_03015;Dbxref=NCBI_GP:TMR47803.1;Name=TMR47803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445362.1;locus_tag=E3V84_03015;product=hypothetical protein;protein_id=TMR47803.1;transl_table=11 SOQE01000020.1 Genbank gene 32497 32958 . + . ID=gene-E3V84_03020;Name=E3V84_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03020 SOQE01000020.1 Protein Homology CDS 32497 32958 . + 0 ID=cds-TMR47804.1;Parent=gene-E3V84_03020;Dbxref=NCBI_GP:TMR47804.1;Name=TMR47804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445363.1;locus_tag=E3V84_03020;product=competence protein ComGF;protein_id=TMR47804.1;transl_table=11 SOQE01000020.1 Genbank gene 32936 33349 . + . ID=gene-E3V84_03025;Name=E3V84_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03025 SOQE01000020.1 Protein Homology CDS 32936 33349 . + 0 ID=cds-TMR47805.1;Parent=gene-E3V84_03025;Dbxref=NCBI_GP:TMR47805.1;Name=TMR47805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359450.1;locus_tag=E3V84_03025;product=competence protein ComGF;protein_id=TMR47805.1;transl_table=11 SOQE01000020.1 Genbank pseudogene 33382 33507 . + . ID=gene-E3V84_03030;Name=E3V84_03030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03030;pseudo=true SOQE01000020.1 Protein Homology CDS 33382 33507 . + 0 ID=cds-E3V84_03030;Parent=gene-E3V84_03030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445365.1;locus_tag=E3V84_03030;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 SOQE01000020.1 Genbank pseudogene 34146 34563 . - . ID=gene-E3V84_03035;Name=E3V84_03035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03035;pseudo=true SOQE01000020.1 Protein Homology CDS 34146 34563 . - 0 ID=cds-E3V84_03035;Parent=gene-E3V84_03035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284935.1;locus_tag=E3V84_03035;product=N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region SOQE01000021.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000021.1 Genbank region 1 511 . + . ID=SOQE01000021.1:1..511;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 ##sequence-region SOQE01000022.1 1 34281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000022.1 Genbank region 1 34281 . + . ID=SOQE01000022.1:1..34281;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000022.1 Genbank gene 1 185 . + . ID=gene-E3V84_03040;Name=E3V84_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03040;partial=true;start_range=.,1 SOQE01000022.1 Protein Homology CDS 1 185 . + 2 ID=cds-TMR47738.1;Parent=gene-E3V84_03040;Dbxref=NCBI_GP:TMR47738.1;Name=TMR47738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=E3V84_03040;partial=true;product=IS1380 family transposase;protein_id=TMR47738.1;start_range=.,1;transl_table=11 SOQE01000022.1 Genbank gene 458 1747 . + . ID=gene-E3V84_03045;Name=E3V84_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03045 SOQE01000022.1 Protein Homology CDS 458 1747 . + 0 ID=cds-TMR47739.1;Parent=gene-E3V84_03045;Dbxref=NCBI_GP:TMR47739.1;Name=TMR47739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359522.1;locus_tag=E3V84_03045;product=histidine--tRNA ligase;protein_id=TMR47739.1;transl_table=11 SOQE01000022.1 Genbank pseudogene 1771 1842 . - . ID=gene-E3V84_03050;Name=E3V84_03050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03050;pseudo=true SOQE01000022.1 Protein Homology CDS 1771 1842 . - 0 ID=cds-E3V84_03050;Parent=gene-E3V84_03050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_03050;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000022.1 Genbank gene 1844 2308 . + . ID=gene-E3V84_03055;Name=E3V84_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03055 SOQE01000022.1 Protein Homology CDS 1844 2308 . + 0 ID=cds-TMR47740.1;Parent=gene-E3V84_03055;Dbxref=NCBI_GP:TMR47740.1;Name=TMR47740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445290.1;locus_tag=E3V84_03055;product=hypothetical protein;protein_id=TMR47740.1;transl_table=11 SOQE01000022.1 Genbank gene 2318 2524 . + . ID=gene-E3V84_03060;Name=E3V84_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03060 SOQE01000022.1 Protein Homology CDS 2318 2524 . + 0 ID=cds-TMR47770.1;Parent=gene-E3V84_03060;Dbxref=NCBI_GP:TMR47770.1;Name=TMR47770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445291.1;locus_tag=E3V84_03060;product=transcriptional regulator;protein_id=TMR47770.1;transl_table=11 SOQE01000022.1 Genbank gene 2524 2712 . + . ID=gene-E3V84_03065;Name=E3V84_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03065 SOQE01000022.1 Protein Homology CDS 2524 2712 . + 0 ID=cds-TMR47741.1;Parent=gene-E3V84_03065;Dbxref=NCBI_GP:TMR47741.1;Name=TMR47741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445292.1;locus_tag=E3V84_03065;product=hypothetical protein;protein_id=TMR47741.1;transl_table=11 SOQE01000022.1 Genbank gene 2718 3467 . + . ID=gene-E3V84_03070;Name=E3V84_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03070 SOQE01000022.1 Protein Homology CDS 2718 3467 . + 0 ID=cds-TMR47742.1;Parent=gene-E3V84_03070;Dbxref=NCBI_GP:TMR47742.1;Name=TMR47742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359518.1;locus_tag=E3V84_03070;product=DUF3169 family protein;protein_id=TMR47742.1;transl_table=11 SOQE01000022.1 Genbank gene 3478 4302 . + . ID=gene-E3V84_03075;Name=E3V84_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03075 SOQE01000022.1 Protein Homology CDS 3478 4302 . + 0 ID=cds-TMR47743.1;Parent=gene-E3V84_03075;Dbxref=NCBI_GP:TMR47743.1;Name=TMR47743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445294.1;locus_tag=E3V84_03075;product=ABC transporter ATP-binding protein;protein_id=TMR47743.1;transl_table=11 SOQE01000022.1 Genbank gene 4295 4993 . + . ID=gene-E3V84_03080;Name=E3V84_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03080 SOQE01000022.1 Protein Homology CDS 4295 4993 . + 0 ID=cds-TMR47744.1;Parent=gene-E3V84_03080;Dbxref=NCBI_GP:TMR47744.1;Name=TMR47744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445295.1;locus_tag=E3V84_03080;product=ABC transporter permease;protein_id=TMR47744.1;transl_table=11 SOQE01000022.1 Genbank gene 5003 5644 . + . ID=gene-E3V84_03085;Name=E3V84_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03085 SOQE01000022.1 Protein Homology CDS 5003 5644 . + 0 ID=cds-TMR47745.1;Parent=gene-E3V84_03085;Dbxref=NCBI_GP:TMR47745.1;Name=TMR47745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359517.1;locus_tag=E3V84_03085;product=CPBP family intramembrane metalloprotease;protein_id=TMR47745.1;transl_table=11 SOQE01000022.1 Genbank gene 5662 5892 . + . ID=gene-E3V84_03090;Name=E3V84_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03090 SOQE01000022.1 Protein Homology CDS 5662 5892 . + 0 ID=cds-TMR47746.1;Parent=gene-E3V84_03090;Dbxref=NCBI_GP:TMR47746.1;Name=TMR47746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445297.1;locus_tag=E3V84_03090;product=hypothetical protein;protein_id=TMR47746.1;transl_table=11 SOQE01000022.1 Genbank gene 6048 7811 . + . ID=gene-E3V84_03095;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=E3V84_03095 SOQE01000022.1 Protein Homology CDS 6048 7811 . + 0 ID=cds-TMR47747.1;Parent=gene-E3V84_03095;Dbxref=NCBI_GP:TMR47747.1;Name=TMR47747.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359515.1;locus_tag=E3V84_03095;product=aspartate--tRNA ligase;protein_id=TMR47747.1;transl_table=11 SOQE01000022.1 Genbank gene 7789 8730 . + . ID=gene-E3V84_03100;Name=E3V84_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03100 SOQE01000022.1 Protein Homology CDS 7789 8730 . + 0 ID=cds-TMR47748.1;Parent=gene-E3V84_03100;Dbxref=NCBI_GP:TMR47748.1;Name=TMR47748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359514.1;locus_tag=E3V84_03100;product=YitT family protein;protein_id=TMR47748.1;transl_table=11 SOQE01000022.1 Genbank gene 8760 9746 . - . ID=gene-E3V84_03105;Name=E3V84_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03105 SOQE01000022.1 Protein Homology CDS 8760 9746 . - 0 ID=cds-TMR47749.1;Parent=gene-E3V84_03105;Dbxref=NCBI_GP:TMR47749.1;Name=TMR47749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359513.1;locus_tag=E3V84_03105;product=LacI family transcriptional regulator;protein_id=TMR47749.1;transl_table=11 SOQE01000022.1 Genbank gene 9756 10556 . - . ID=gene-E3V84_03110;Name=E3V84_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03110 SOQE01000022.1 Protein Homology CDS 9756 10556 . - 0 ID=cds-TMR47750.1;Parent=gene-E3V84_03110;Dbxref=NCBI_GP:TMR47750.1;Name=TMR47750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359512.1;locus_tag=E3V84_03110;product=DUF1189 domain-containing protein;protein_id=TMR47750.1;transl_table=11 SOQE01000022.1 Genbank gene 10818 11660 . - . ID=gene-E3V84_03115;Name=E3V84_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03115 SOQE01000022.1 Protein Homology CDS 10818 11660 . - 0 ID=cds-TMR47751.1;Parent=gene-E3V84_03115;Dbxref=NCBI_GP:TMR47751.1;Name=TMR47751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445302.1;locus_tag=E3V84_03115;product=sugar ABC transporter permease;protein_id=TMR47751.1;transl_table=11 SOQE01000022.1 Genbank gene 11662 12969 . - . ID=gene-E3V84_03120;Name=E3V84_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03120 SOQE01000022.1 Protein Homology CDS 11662 12969 . - 0 ID=cds-TMR47752.1;Parent=gene-E3V84_03120;Dbxref=NCBI_GP:TMR47752.1;Name=TMR47752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359510.1;locus_tag=E3V84_03120;product=sugar ABC transporter permease;protein_id=TMR47752.1;transl_table=11 SOQE01000022.1 Genbank gene 13066 14337 . - . ID=gene-E3V84_03125;Name=E3V84_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03125 SOQE01000022.1 Protein Homology CDS 13066 14337 . - 0 ID=cds-TMR47753.1;Parent=gene-E3V84_03125;Dbxref=NCBI_GP:TMR47753.1;Name=TMR47753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359509.1;locus_tag=E3V84_03125;product=extracellular solute-binding protein;protein_id=TMR47753.1;transl_table=11 SOQE01000022.1 Genbank gene 14998 16515 . + . ID=gene-E3V84_03130;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=E3V84_03130 SOQE01000022.1 Protein Homology CDS 14998 16515 . + 0 ID=cds-TMR47754.1;Parent=gene-E3V84_03130;Dbxref=NCBI_GP:TMR47754.1;Name=TMR47754.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445305.1;locus_tag=E3V84_03130;product=4-alpha-glucanotransferase;protein_id=TMR47754.1;transl_table=11 SOQE01000022.1 Genbank gene 16541 18799 . + . ID=gene-E3V84_03135;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=E3V84_03135 SOQE01000022.1 Protein Homology CDS 16541 18799 . + 0 ID=cds-TMR47755.1;Parent=gene-E3V84_03135;Dbxref=NCBI_GP:TMR47755.1;Name=TMR47755.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359507.1;locus_tag=E3V84_03135;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=TMR47755.1;transl_table=11 SOQE01000022.1 Genbank gene 19133 19339 . + . ID=gene-E3V84_03140;Name=E3V84_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03140 SOQE01000022.1 Protein Homology CDS 19133 19339 . + 0 ID=cds-TMR47756.1;Parent=gene-E3V84_03140;Dbxref=NCBI_GP:TMR47756.1;Name=TMR47756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359505.1;locus_tag=E3V84_03140;product=hypothetical protein;protein_id=TMR47756.1;transl_table=11 SOQE01000022.1 Genbank gene 19692 20540 . - . ID=gene-E3V84_03145;Name=E3V84_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03145 SOQE01000022.1 Protein Homology CDS 19692 20540 . - 0 ID=cds-TMR47757.1;Parent=gene-E3V84_03145;Dbxref=NCBI_GP:TMR47757.1;Name=TMR47757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359504.1;locus_tag=E3V84_03145;product=methyltransferase domain-containing protein;protein_id=TMR47757.1;transl_table=11 SOQE01000022.1 Genbank gene 20691 20969 . + . ID=gene-E3V84_03150;Name=E3V84_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03150 SOQE01000022.1 Protein Homology CDS 20691 20969 . + 0 ID=cds-TMR47758.1;Parent=gene-E3V84_03150;Dbxref=NCBI_GP:TMR47758.1;Name=TMR47758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445308.1;locus_tag=E3V84_03150;product=hypothetical protein;protein_id=TMR47758.1;transl_table=11 SOQE01000022.1 Genbank gene 20971 23031 . + . ID=gene-E3V84_03155;Name=E3V84_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03155 SOQE01000022.1 Protein Homology CDS 20971 23031 . + 0 ID=cds-TMR47759.1;Parent=gene-E3V84_03155;Dbxref=NCBI_GP:TMR47759.1;Name=TMR47759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445309.1;locus_tag=E3V84_03155;product=heavy metal translocating P-type ATPase;protein_id=TMR47759.1;transl_table=11 SOQE01000022.1 Genbank gene 23109 24365 . - . ID=gene-E3V84_03160;Name=E3V84_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03160 SOQE01000022.1 Protein Homology CDS 23109 24365 . - 0 ID=cds-TMR47760.1;Parent=gene-E3V84_03160;Dbxref=NCBI_GP:TMR47760.1;Name=TMR47760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546895.1;locus_tag=E3V84_03160;product=tyrosine--tRNA ligase;protein_id=TMR47760.1;transl_table=11 SOQE01000022.1 Genbank gene 24507 26972 . + . ID=gene-E3V84_03165;Name=E3V84_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03165 SOQE01000022.1 Protein Homology CDS 24507 26972 . + 0 ID=cds-TMR47761.1;Parent=gene-E3V84_03165;Dbxref=NCBI_GP:TMR47761.1;Name=TMR47761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359500.1;locus_tag=E3V84_03165;product=penicillin-binding protein;protein_id=TMR47761.1;transl_table=11 SOQE01000022.1 Genbank gene 27044 27955 . + . ID=gene-E3V84_03170;Name=E3V84_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03170 SOQE01000022.1 Protein Homology CDS 27044 27955 . + 0 ID=cds-TMR47762.1;Parent=gene-E3V84_03170;Dbxref=NCBI_GP:TMR47762.1;Name=TMR47762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445312.1;locus_tag=E3V84_03170;product=EamA/RhaT family transporter;protein_id=TMR47762.1;transl_table=11 SOQE01000022.1 Genbank gene 28186 28884 . + . ID=gene-E3V84_03175;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=E3V84_03175 SOQE01000022.1 Protein Homology CDS 28186 28884 . + 0 ID=cds-TMR47763.1;Parent=gene-E3V84_03175;Dbxref=NCBI_GP:TMR47763.1;Name=TMR47763.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359498.1;locus_tag=E3V84_03175;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=TMR47763.1;transl_table=11 SOQE01000022.1 Genbank gene 28953 30083 . + . ID=gene-E3V84_03180;Name=E3V84_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03180 SOQE01000022.1 Protein Homology CDS 28953 30083 . + 0 ID=cds-TMR47764.1;Parent=gene-E3V84_03180;Dbxref=NCBI_GP:TMR47764.1;Name=TMR47764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445314.1;locus_tag=E3V84_03180;product=N-acetyldiaminopimelate deacetylase;protein_id=TMR47764.1;transl_table=11 SOQE01000022.1 Genbank gene 30095 30634 . + . ID=gene-E3V84_03185;Name=E3V84_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03185 SOQE01000022.1 Protein Homology CDS 30095 30634 . + 0 ID=cds-TMR47765.1;Parent=gene-E3V84_03185;Dbxref=NCBI_GP:TMR47765.1;Name=TMR47765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445315.1;locus_tag=E3V84_03185;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=TMR47765.1;transl_table=11 SOQE01000022.1 Genbank gene 30618 31292 . + . ID=gene-E3V84_03190;Name=E3V84_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03190 SOQE01000022.1 Protein Homology CDS 30618 31292 . + 0 ID=cds-TMR47766.1;Parent=gene-E3V84_03190;Dbxref=NCBI_GP:TMR47766.1;Name=TMR47766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445316.1;locus_tag=E3V84_03190;product=rhomboid family intramembrane serine protease;protein_id=TMR47766.1;transl_table=11 SOQE01000022.1 Genbank gene 31453 32352 . - . ID=gene-E3V84_03195;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=E3V84_03195 SOQE01000022.1 Protein Homology CDS 31453 32352 . - 0 ID=cds-TMR47767.1;Parent=gene-E3V84_03195;Dbxref=NCBI_GP:TMR47767.1;Name=TMR47767.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445317.1;locus_tag=E3V84_03195;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=TMR47767.1;transl_table=11 SOQE01000022.1 Genbank gene 32374 33390 . - . ID=gene-E3V84_03200;Name=E3V84_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03200 SOQE01000022.1 Protein Homology CDS 32374 33390 . - 0 ID=cds-TMR47768.1;Parent=gene-E3V84_03200;Dbxref=NCBI_GP:TMR47768.1;Name=TMR47768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359493.1;locus_tag=E3V84_03200;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=TMR47768.1;transl_table=11 SOQE01000022.1 Genbank gene 33536 34054 . + . ID=gene-E3V84_03205;Name=E3V84_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03205 SOQE01000022.1 Protein Homology CDS 33536 34054 . + 0 ID=cds-TMR47769.1;Parent=gene-E3V84_03205;Dbxref=NCBI_GP:TMR47769.1;Name=TMR47769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359492.1;locus_tag=E3V84_03205;product=XRE family transcriptional regulator;protein_id=TMR47769.1;transl_table=11 ##sequence-region SOQE01000023.1 1 1305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000023.1 Genbank region 1 1305 . + . ID=SOQE01000023.1:1..1305;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000023.1 Genbank gene 1 1008 . - . ID=gene-E3V84_03210;Name=E3V84_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03210;partial=true;start_range=.,1 SOQE01000023.1 Protein Homology CDS 1 1008 . - 0 ID=cds-TMR47703.1;Parent=gene-E3V84_03210;Dbxref=NCBI_GP:TMR47703.1;Name=TMR47703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V84_03210;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR47703.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000024.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000024.1 Genbank region 1 640 . + . ID=SOQE01000024.1:1..640;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000024.1 Genbank pseudogene 1 546 . + . ID=gene-E3V84_03215;Name=E3V84_03215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03215;pseudo=true SOQE01000024.1 Protein Homology CDS 1 546 . + 0 ID=cds-E3V84_03215;Parent=gene-E3V84_03215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=E3V84_03215;product=pblB;pseudo=true;transl_table=11 ##sequence-region SOQE01000025.1 1 1042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000025.1 Genbank region 1 1042 . + . ID=SOQE01000025.1:1..1042;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000025.1 Genbank gene 217 999 . - . ID=gene-E3V84_03220;Name=E3V84_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03220 SOQE01000025.1 Protein Homology CDS 217 999 . - 0 ID=cds-TMR47679.1;Parent=gene-E3V84_03220;Dbxref=NCBI_GP:TMR47679.1;Name=TMR47679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067166.1;locus_tag=E3V84_03220;product=hypothetical protein;protein_id=TMR47679.1;transl_table=11 ##sequence-region SOQE01000026.1 1 17418 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000026.1 Genbank region 1 17418 . + . ID=SOQE01000026.1:1..17418;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000026.1 Genbank pseudogene 1 329 . + . ID=gene-E3V84_03225;Name=E3V84_03225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03225;pseudo=true SOQE01000026.1 Protein Homology CDS 1 329 . + 2 ID=cds-E3V84_03225;Parent=gene-E3V84_03225;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_03225;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000026.1 Genbank gene 451 2226 . - . ID=gene-E3V84_03230;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=E3V84_03230 SOQE01000026.1 Protein Homology CDS 451 2226 . - 0 ID=cds-TMR47642.1;Parent=gene-E3V84_03230;Dbxref=NCBI_GP:TMR47642.1;Name=TMR47642.1;gbkey=CDS;gene=spxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446533.1;locus_tag=E3V84_03230;product=pyruvate oxidase;protein_id=TMR47642.1;transl_table=11 SOQE01000026.1 Genbank gene 2228 2422 . + . ID=gene-E3V84_03235;Name=E3V84_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03235 SOQE01000026.1 Protein Homology CDS 2228 2422 . + 0 ID=cds-TMR47643.1;Parent=gene-E3V84_03235;Dbxref=NCBI_GP:TMR47643.1;Name=TMR47643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843838.1;locus_tag=E3V84_03235;product=hypothetical protein;protein_id=TMR47643.1;transl_table=11 SOQE01000026.1 Genbank gene 2432 4675 . - . ID=gene-E3V84_03240;Name=E3V84_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03240 SOQE01000026.1 Protein Homology CDS 2432 4675 . - 0 ID=cds-TMR47644.1;Parent=gene-E3V84_03240;Dbxref=NCBI_GP:TMR47644.1;Name=TMR47644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446534.1;locus_tag=E3V84_03240;product=heavy metal translocating P-type ATPase;protein_id=TMR47644.1;transl_table=11 SOQE01000026.1 Genbank gene 4685 5056 . - . ID=gene-E3V84_03245;Name=E3V84_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03245 SOQE01000026.1 Protein Homology CDS 4685 5056 . - 0 ID=cds-TMR47645.1;Parent=gene-E3V84_03245;Dbxref=NCBI_GP:TMR47645.1;Name=TMR47645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446535.1;locus_tag=E3V84_03245;product=ATPase;protein_id=TMR47645.1;transl_table=11 SOQE01000026.1 Genbank gene 5067 5462 . - . ID=gene-E3V84_03250;Name=E3V84_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03250 SOQE01000026.1 Protein Homology CDS 5067 5462 . - 0 ID=cds-TMR47659.1;Parent=gene-E3V84_03250;Dbxref=NCBI_GP:TMR47659.1;Name=TMR47659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446536.1;locus_tag=E3V84_03250;product=CopY/TcrY family copper transport repressor;protein_id=TMR47659.1;transl_table=11 SOQE01000026.1 cmsearch riboswitch 5646 5743 . + . ID=id-SOQE01000026.1:5646..5743;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000026.1 Genbank gene 5827 6618 . + . ID=gene-E3V84_03255;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=E3V84_03255 SOQE01000026.1 Protein Homology CDS 5827 6618 . + 0 ID=cds-TMR47646.1;Parent=gene-E3V84_03255;Dbxref=NCBI_GP:TMR47646.1;Name=TMR47646.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358232.1;locus_tag=E3V84_03255;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TMR47646.1;transl_table=11 SOQE01000026.1 Genbank gene 6779 7411 . - . ID=gene-E3V84_03260;Name=E3V84_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03260 SOQE01000026.1 Protein Homology CDS 6779 7411 . - 0 ID=cds-TMR47647.1;Parent=gene-E3V84_03260;Dbxref=NCBI_GP:TMR47647.1;Name=TMR47647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358231.1;locus_tag=E3V84_03260;product=thiamine phosphate synthase;protein_id=TMR47647.1;transl_table=11 SOQE01000026.1 Genbank gene 7404 8207 . - . ID=gene-E3V84_03265;Name=E3V84_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03265 SOQE01000026.1 Protein Homology CDS 7404 8207 . - 0 ID=cds-TMR47648.1;Parent=gene-E3V84_03265;Dbxref=NCBI_GP:TMR47648.1;Name=TMR47648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358230.1;locus_tag=E3V84_03265;product=hydroxyethylthiazole kinase;protein_id=TMR47648.1;transl_table=11 SOQE01000026.1 Genbank gene 8207 8731 . - . ID=gene-E3V84_03270;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=E3V84_03270 SOQE01000026.1 Protein Homology CDS 8207 8731 . - 0 ID=cds-TMR47649.1;Parent=gene-E3V84_03270;Dbxref=NCBI_GP:TMR47649.1;Name=TMR47649.1;gbkey=CDS;gene=thiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358229.1;locus_tag=E3V84_03270;product=energy coupling factor transporter S component ThiW;protein_id=TMR47649.1;transl_table=11 SOQE01000026.1 Genbank gene 8737 9426 . - . ID=gene-E3V84_03275;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=E3V84_03275 SOQE01000026.1 Protein Homology CDS 8737 9426 . - 0 ID=cds-TMR47650.1;Parent=gene-E3V84_03275;Dbxref=NCBI_GP:TMR47650.1;Name=TMR47650.1;gbkey=CDS;gene=tenA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358228.1;locus_tag=E3V84_03275;product=thiaminase II;protein_id=TMR47650.1;transl_table=11 SOQE01000026.1 Genbank gene 9437 10087 . - . ID=gene-E3V84_03280;Name=E3V84_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03280 SOQE01000026.1 Protein Homology CDS 9437 10087 . - 0 ID=cds-TMR47651.1;Parent=gene-E3V84_03280;Dbxref=NCBI_GP:TMR47651.1;Name=TMR47651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358227.1;locus_tag=E3V84_03280;product=cobalt ABC transporter permease;protein_id=TMR47651.1;transl_table=11 SOQE01000026.1 Genbank gene 10089 11474 . - . ID=gene-E3V84_03285;Name=E3V84_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03285 SOQE01000026.1 Protein Homology CDS 10089 11474 . - 0 ID=cds-TMR47652.1;Parent=gene-E3V84_03285;Dbxref=NCBI_GP:TMR47652.1;Name=TMR47652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358226.1;locus_tag=E3V84_03285;product=ABC transporter ATP-binding protein;protein_id=TMR47652.1;transl_table=11 SOQE01000026.1 Genbank gene 11475 12068 . - . ID=gene-E3V84_03290;Name=E3V84_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03290 SOQE01000026.1 Protein Homology CDS 11475 12068 . - 0 ID=cds-TMR47653.1;Parent=gene-E3V84_03290;Dbxref=NCBI_GP:TMR47653.1;Name=TMR47653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358225.1;locus_tag=E3V84_03290;product=cobalt ABC transporter permease;protein_id=TMR47653.1;transl_table=11 SOQE01000026.1 cmsearch riboswitch 12296 12384 . - . ID=id-SOQE01000026.1:12296..12384;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000026.1 Genbank gene 12594 13223 . - . ID=gene-E3V84_03295;Name=E3V84_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03295 SOQE01000026.1 Protein Homology CDS 12594 13223 . - 0 ID=cds-TMR47654.1;Parent=gene-E3V84_03295;Dbxref=NCBI_GP:TMR47654.1;Name=TMR47654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358224.1;locus_tag=E3V84_03295;product=thiamine phosphate synthase;protein_id=TMR47654.1;transl_table=11 SOQE01000026.1 Genbank gene 13225 14028 . - . ID=gene-E3V84_03300;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=E3V84_03300 SOQE01000026.1 Protein Homology CDS 13225 14028 . - 0 ID=cds-TMR47655.1;Parent=gene-E3V84_03300;Dbxref=NCBI_GP:TMR47655.1;Name=TMR47655.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358223.1;locus_tag=E3V84_03300;product=hydroxyethylthiazole kinase;protein_id=TMR47655.1;transl_table=11 SOQE01000026.1 Genbank gene 14318 14986 . - . ID=gene-E3V84_03305;Name=E3V84_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03305 SOQE01000026.1 Protein Homology CDS 14318 14986 . - 0 ID=cds-TMR47656.1;Parent=gene-E3V84_03305;Dbxref=NCBI_GP:TMR47656.1;Name=TMR47656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405341.1;locus_tag=E3V84_03305;product=TenA family protein;protein_id=TMR47656.1;transl_table=11 SOQE01000026.1 cmsearch riboswitch 15203 15291 . - . ID=id-SOQE01000026.1:15203..15291;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000026.1 Genbank gene 15440 16576 . - . ID=gene-E3V84_03310;Name=lctO;gbkey=Gene;gene=lctO;gene_biotype=protein_coding;locus_tag=E3V84_03310 SOQE01000026.1 Protein Homology CDS 15440 16576 . - 0 ID=cds-TMR47657.1;Parent=gene-E3V84_03310;Dbxref=NCBI_GP:TMR47657.1;Name=TMR47657.1;gbkey=CDS;gene=lctO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358221.1;locus_tag=E3V84_03310;product=L-lactate oxidase;protein_id=TMR47657.1;transl_table=11 SOQE01000026.1 Genbank gene 16868 17404 . - . ID=gene-E3V84_03315;Name=E3V84_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03315 SOQE01000026.1 Protein Homology CDS 16868 17404 . - 0 ID=cds-TMR47658.1;Parent=gene-E3V84_03315;Dbxref=NCBI_GP:TMR47658.1;Name=TMR47658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_03315;product=transposase;protein_id=TMR47658.1;transl_table=11 ##sequence-region SOQE01000027.1 1 2444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000027.1 Genbank region 1 2444 . + . ID=SOQE01000027.1:1..2444;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000027.1 Genbank gene 12 518 . + . ID=gene-E3V84_03320;Name=E3V84_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03320 SOQE01000027.1 Protein Homology CDS 12 518 . + 0 ID=cds-TMR47629.1;Parent=gene-E3V84_03320;Dbxref=NCBI_GP:TMR47629.1;Name=TMR47629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284928.1;locus_tag=E3V84_03320;product=restriction endonuclease subunit S;protein_id=TMR47629.1;transl_table=11 SOQE01000027.1 Genbank gene 472 978 . - . ID=gene-E3V84_03325;Name=E3V84_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03325 SOQE01000027.1 Protein Homology CDS 472 978 . - 0 ID=cds-TMR47632.1;Parent=gene-E3V84_03325;Dbxref=NCBI_GP:TMR47632.1;Name=TMR47632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769445.1;locus_tag=E3V84_03325;product=restriction endonuclease subunit S;protein_id=TMR47632.1;transl_table=11 SOQE01000027.1 Genbank gene 1061 1858 . - . ID=gene-E3V84_03330;Name=E3V84_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03330 SOQE01000027.1 Protein Homology CDS 1061 1858 . - 0 ID=cds-TMR47630.1;Parent=gene-E3V84_03330;Dbxref=NCBI_GP:TMR47630.1;Name=TMR47630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358041.1;locus_tag=E3V84_03330;product=integrase;protein_id=TMR47630.1;transl_table=11 SOQE01000027.1 Genbank gene 1915 2444 . - . ID=gene-E3V84_03335;Name=E3V84_03335;end_range=2444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03335;partial=true SOQE01000027.1 Protein Homology CDS 1915 2444 . - 2 ID=cds-TMR47631.1;Parent=gene-E3V84_03335;Dbxref=NCBI_GP:TMR47631.1;Name=TMR47631.1;end_range=2444,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=E3V84_03335;partial=true;product=type I restriction endonuclease subunit S;protein_id=TMR47631.1;transl_table=11 ##sequence-region SOQE01000028.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000028.1 Genbank region 1 784 . + . ID=SOQE01000028.1:1..784;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000028.1 Genbank gene 1 260 . - . ID=gene-E3V84_03340;Name=E3V84_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03340;partial=true;start_range=.,1 SOQE01000028.1 Protein Homology CDS 1 260 . - 0 ID=cds-TMR47611.1;Parent=gene-E3V84_03340;Dbxref=NCBI_GP:TMR47611.1;Name=TMR47611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_03340;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR47611.1;start_range=.,1;transl_table=11 SOQE01000028.1 Genbank pseudogene 301 684 . - . ID=gene-E3V84_03345;Name=E3V84_03345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03345;pseudo=true SOQE01000028.1 Protein Homology CDS 301 684 . - 0 ID=cds-E3V84_03345;Parent=gene-E3V84_03345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=E3V84_03345;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000029.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000029.1 Genbank region 1 979 . + . ID=SOQE01000029.1:1..979;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000029.1 Genbank gene 330 626 . + . ID=gene-E3V84_03350;Name=E3V84_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03350 SOQE01000029.1 Protein Homology CDS 330 626 . + 0 ID=cds-TMR47599.1;Parent=gene-E3V84_03350;Dbxref=NCBI_GP:TMR47599.1;Name=TMR47599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837727.1;locus_tag=E3V84_03350;product=circular bacteriocin%2C circularin A/uberolysin family;protein_id=TMR47599.1;transl_table=11 SOQE01000029.1 Genbank gene 633 979 . + . ID=gene-E3V84_03355;Name=E3V84_03355;end_range=979,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03355;partial=true SOQE01000029.1 Protein Homology CDS 633 979 . + 0 ID=cds-TMR47600.1;Parent=gene-E3V84_03355;Dbxref=NCBI_GP:TMR47600.1;Name=TMR47600.1;end_range=979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698829.1;locus_tag=E3V84_03355;partial=true;product=hypothetical protein;protein_id=TMR47600.1;transl_table=11 ##sequence-region SOQE01000003.1 1 32654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000003.1 Genbank region 1 32654 . + . ID=SOQE01000003.1:1..32654;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000003.1 Genbank pseudogene 1 541 . - . ID=gene-E3V84_00115;Name=E3V84_00115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00115;pseudo=true SOQE01000003.1 Protein Homology CDS 1 541 . - 0 ID=cds-E3V84_00115;Parent=gene-E3V84_00115;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00115;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000003.1 Genbank gene 889 1842 . + . ID=gene-E3V84_00120;Name=E3V84_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00120 SOQE01000003.1 Protein Homology CDS 889 1842 . + 0 ID=cds-TMR48908.1;Parent=gene-E3V84_00120;Dbxref=NCBI_GP:TMR48908.1;Name=TMR48908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359447.1;locus_tag=E3V84_00120;product=class I SAM-dependent methyltransferase;protein_id=TMR48908.1;transl_table=11 SOQE01000003.1 Genbank gene 1892 3082 . + . ID=gene-E3V84_00125;Name=E3V84_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00125 SOQE01000003.1 Protein Homology CDS 1892 3082 . + 0 ID=cds-TMR48909.1;Parent=gene-E3V84_00125;Dbxref=NCBI_GP:TMR48909.1;Name=TMR48909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359446.1;locus_tag=E3V84_00125;product=acetate kinase;protein_id=TMR48909.1;transl_table=11 SOQE01000003.1 Genbank pseudogene 3598 4053 . + . ID=gene-E3V84_00130;Name=E3V84_00130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00130;pseudo=true SOQE01000003.1 Protein Homology CDS 3598 4053 . + 0 ID=cds-E3V84_00130;Parent=gene-E3V84_00130;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446611.1;locus_tag=E3V84_00130;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000003.1 Genbank gene 4059 4604 . + . ID=gene-E3V84_00135;Name=E3V84_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00135 SOQE01000003.1 GeneMarkS-2+ CDS 4059 4604 . + 0 ID=cds-TMR48910.1;Parent=gene-E3V84_00135;Dbxref=NCBI_GP:TMR48910.1;Name=TMR48910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_00135;product=hypothetical protein;protein_id=TMR48910.1;transl_table=11 SOQE01000003.1 Genbank gene 4931 5302 . + . ID=gene-E3V84_00140;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=E3V84_00140 SOQE01000003.1 Protein Homology CDS 4931 5302 . + 0 ID=cds-TMR48911.1;Parent=gene-E3V84_00140;Dbxref=NCBI_GP:TMR48911.1;Name=TMR48911.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359445.1;locus_tag=E3V84_00140;product=ribonuclease P protein component;protein_id=TMR48911.1;transl_table=11 SOQE01000003.1 Genbank gene 5271 6101 . + . ID=gene-E3V84_00145;Name=E3V84_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00145 SOQE01000003.1 Protein Homology CDS 5271 6101 . + 0 ID=cds-TMR48912.1;Parent=gene-E3V84_00145;Dbxref=NCBI_GP:TMR48912.1;Name=TMR48912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359444.1;locus_tag=E3V84_00145;product=membrane protein insertase YidC;protein_id=TMR48912.1;transl_table=11 SOQE01000003.1 Genbank gene 6119 7105 . + . ID=gene-E3V84_00150;Name=E3V84_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00150 SOQE01000003.1 Protein Homology CDS 6119 7105 . + 0 ID=cds-TMR48913.1;Parent=gene-E3V84_00150;Dbxref=NCBI_GP:TMR48913.1;Name=TMR48913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359443.1;locus_tag=E3V84_00150;product=protein jag;protein_id=TMR48913.1;transl_table=11 SOQE01000003.1 Genbank gene 7156 7779 . + . ID=gene-E3V84_00155;Name=E3V84_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00155 SOQE01000003.1 Protein Homology CDS 7156 7779 . + 0 ID=cds-TMR48914.1;Parent=gene-E3V84_00155;Dbxref=NCBI_GP:TMR48914.1;Name=TMR48914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359442.1;locus_tag=E3V84_00155;product=ribonuclease P;protein_id=TMR48914.1;transl_table=11 SOQE01000003.1 Genbank gene 7910 9367 . + . ID=gene-E3V84_00160;Name=E3V84_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00160 SOQE01000003.1 Protein Homology CDS 7910 9367 . + 0 ID=cds-TMR48915.1;Parent=gene-E3V84_00160;Dbxref=NCBI_GP:TMR48915.1;Name=TMR48915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359441.2;locus_tag=E3V84_00160;product=PTS ascorbate transporter subunit IIC;protein_id=TMR48915.1;transl_table=11 SOQE01000003.1 Genbank gene 9390 9671 . + . ID=gene-E3V84_00165;Name=E3V84_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00165 SOQE01000003.1 Protein Homology CDS 9390 9671 . + 0 ID=cds-TMR48916.1;Parent=gene-E3V84_00165;Dbxref=NCBI_GP:TMR48916.1;Name=TMR48916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359440.1;locus_tag=E3V84_00165;product=PTS sugar transporter subunit IIB;protein_id=TMR48916.1;transl_table=11 SOQE01000003.1 Genbank gene 9748 10233 . + . ID=gene-E3V84_00170;Name=E3V84_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00170 SOQE01000003.1 Protein Homology CDS 9748 10233 . + 0 ID=cds-TMR48917.1;Parent=gene-E3V84_00170;Dbxref=NCBI_GP:TMR48917.1;Name=TMR48917.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B functions with enzymes IIB (sgaB%3B ulaB) and IIC (sgaT%3B ulaA) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359439.1;locus_tag=E3V84_00170;product=PTS ascorbate transporter subunit IIA;protein_id=TMR48917.1;transl_table=11 SOQE01000003.1 Genbank gene 10250 10915 . + . ID=gene-E3V84_00175;Name=E3V84_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00175 SOQE01000003.1 Protein Homology CDS 10250 10915 . + 0 ID=cds-TMR48918.1;Parent=gene-E3V84_00175;Dbxref=NCBI_GP:TMR48918.1;Name=TMR48918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166733.1;locus_tag=E3V84_00175;product=3-dehydro-L-gulonate-6-phosphate decarboxylase;protein_id=TMR48918.1;transl_table=11 SOQE01000003.1 Genbank gene 10919 11782 . + . ID=gene-E3V84_00180;Name=E3V84_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00180 SOQE01000003.1 Protein Homology CDS 10919 11782 . + 0 ID=cds-TMR48919.1;Parent=gene-E3V84_00180;Dbxref=NCBI_GP:TMR48919.1;Name=TMR48919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359437.1;locus_tag=E3V84_00180;product=L-ribulose-5-phosphate 3-epimerase;protein_id=TMR48919.1;transl_table=11 SOQE01000003.1 Genbank gene 11784 12488 . + . ID=gene-E3V84_00185;Name=E3V84_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00185 SOQE01000003.1 Protein Homology CDS 11784 12488 . + 0 ID=cds-TMR48920.1;Parent=gene-E3V84_00185;Dbxref=NCBI_GP:TMR48920.1;Name=TMR48920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359436.1;locus_tag=E3V84_00185;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TMR48920.1;transl_table=11 SOQE01000003.1 Genbank gene 12667 14340 . + . ID=gene-E3V84_00190;Name=E3V84_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00190 SOQE01000003.1 Protein Homology CDS 12667 14340 . + 0 ID=cds-TMR48921.1;Parent=gene-E3V84_00190;Dbxref=NCBI_GP:TMR48921.1;Name=TMR48921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359435.1;locus_tag=E3V84_00190;product=transcription antiterminator;protein_id=TMR48921.1;transl_table=11 SOQE01000003.1 Genbank gene 14452 15543 . + . ID=gene-E3V84_00195;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=E3V84_00195 SOQE01000003.1 Protein Homology CDS 14452 15543 . + 0 ID=cds-TMR48922.1;Parent=gene-E3V84_00195;Dbxref=NCBI_GP:TMR48922.1;Name=TMR48922.1;gbkey=CDS;gene=ulaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359434.1;locus_tag=E3V84_00195;product=L-ascorbate 6-phosphate lactonase;protein_id=TMR48922.1;transl_table=11 SOQE01000003.1 Genbank gene 15657 17633 . + . ID=gene-E3V84_00200;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=E3V84_00200 SOQE01000003.1 Protein Homology CDS 15657 17633 . + 0 ID=cds-TMR48923.1;Parent=gene-E3V84_00200;Dbxref=NCBI_GP:TMR48923.1;Name=TMR48923.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445380.1;locus_tag=E3V84_00200;product=transketolase;protein_id=TMR48923.1;transl_table=11 SOQE01000003.1 Genbank gene 17747 18367 . - . ID=gene-E3V84_00205;Name=E3V84_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00205 SOQE01000003.1 Protein Homology CDS 17747 18367 . - 0 ID=cds-TMR48924.1;Parent=gene-E3V84_00205;Dbxref=NCBI_GP:TMR48924.1;Name=TMR48924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277955.1;locus_tag=E3V84_00205;product=hypothetical protein;protein_id=TMR48924.1;transl_table=11 SOQE01000003.1 Genbank gene 18446 18646 . + . ID=gene-E3V84_00210;Name=E3V84_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00210 SOQE01000003.1 Protein Homology CDS 18446 18646 . + 0 ID=cds-TMR48925.1;Parent=gene-E3V84_00210;Dbxref=NCBI_GP:TMR48925.1;Name=TMR48925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868619.1;locus_tag=E3V84_00210;product=hypothetical protein;protein_id=TMR48925.1;transl_table=11 SOQE01000003.1 Genbank gene 18745 19044 . + . ID=gene-E3V84_00215;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=E3V84_00215 SOQE01000003.1 Protein Homology CDS 18745 19044 . + 0 ID=cds-TMR48926.1;Parent=gene-E3V84_00215;Dbxref=NCBI_GP:TMR48926.1;Name=TMR48926.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445381.1;locus_tag=E3V84_00215;product=preprotein translocase subunit YajC;protein_id=TMR48926.1;transl_table=11 SOQE01000003.1 Genbank gene 19091 19534 . + . ID=gene-E3V84_00220;Name=E3V84_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00220 SOQE01000003.1 Protein Homology CDS 19091 19534 . + 0 ID=cds-TMR48927.1;Parent=gene-E3V84_00220;Dbxref=NCBI_GP:TMR48927.1;Name=TMR48927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445382.1;locus_tag=E3V84_00220;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=TMR48927.1;transl_table=11 SOQE01000003.1 Genbank gene 19521 19931 . + . ID=gene-E3V84_00225;Name=E3V84_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00225 SOQE01000003.1 Protein Homology CDS 19521 19931 . + 0 ID=cds-TMR48928.1;Parent=gene-E3V84_00225;Dbxref=NCBI_GP:TMR48928.1;Name=TMR48928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359430.1;locus_tag=E3V84_00225;product=hypothetical protein;protein_id=TMR48928.1;transl_table=11 SOQE01000003.1 Genbank gene 20231 22882 . + . ID=gene-E3V84_00230;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;locus_tag=E3V84_00230 SOQE01000003.1 Protein Homology CDS 20231 22882 . + 0 ID=cds-TMR48929.1;Parent=gene-E3V84_00230;Dbxref=NCBI_GP:TMR48929.1;Name=TMR48929.1;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445384.1;locus_tag=E3V84_00230;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=TMR48929.1;transl_table=11 SOQE01000003.1 Genbank gene 23006 23926 . + . ID=gene-E3V84_00235;Name=E3V84_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00235 SOQE01000003.1 Protein Homology CDS 23006 23926 . + 0 ID=cds-TMR48930.1;Parent=gene-E3V84_00235;Dbxref=NCBI_GP:TMR48930.1;Name=TMR48930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033774.1;locus_tag=E3V84_00235;product=XRE family transcriptional regulator;protein_id=TMR48930.1;transl_table=11 SOQE01000003.1 Genbank gene 24242 24925 . + . ID=gene-E3V84_00240;Name=E3V84_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00240 SOQE01000003.1 Protein Homology CDS 24242 24925 . + 0 ID=cds-TMR48931.1;Parent=gene-E3V84_00240;Dbxref=NCBI_GP:TMR48931.1;Name=TMR48931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183753.1;locus_tag=E3V84_00240;product=ABC transporter ATP-binding protein;protein_id=TMR48931.1;transl_table=11 SOQE01000003.1 Genbank gene 25215 26195 . + . ID=gene-E3V84_00245;Name=E3V84_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00245 SOQE01000003.1 Protein Homology CDS 25215 26195 . + 0 ID=cds-TMR48939.1;Parent=gene-E3V84_00245;Dbxref=NCBI_GP:TMR48939.1;Name=TMR48939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359418.1;locus_tag=E3V84_00245;product=FtsX-like permease family protein;protein_id=TMR48939.1;transl_table=11 SOQE01000003.1 Genbank gene 26372 27379 . + . ID=gene-E3V84_00250;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=E3V84_00250 SOQE01000003.1 Protein Homology CDS 26372 27379 . + 0 ID=cds-TMR48932.1;Parent=gene-E3V84_00250;Dbxref=NCBI_GP:TMR48932.1;Name=TMR48932.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=E3V84_00250;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=TMR48932.1;transl_table=11 SOQE01000003.1 Genbank gene 27448 28323 . - . ID=gene-E3V84_00255;Name=E3V84_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00255 SOQE01000003.1 Protein Homology CDS 27448 28323 . - 0 ID=cds-TMR48933.1;Parent=gene-E3V84_00255;Dbxref=NCBI_GP:TMR48933.1;Name=TMR48933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445386.1;locus_tag=E3V84_00255;product=RluA family pseudouridine synthase;protein_id=TMR48933.1;transl_table=11 SOQE01000003.1 Genbank gene 28410 30605 . + . ID=gene-E3V84_00260;Name=E3V84_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00260 SOQE01000003.1 Protein Homology CDS 28410 30605 . + 0 ID=cds-TMR48934.1;Parent=gene-E3V84_00260;Dbxref=NCBI_GP:TMR48934.1;Name=TMR48934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359415.1;locus_tag=E3V84_00260;product=penicillin-binding protein;protein_id=TMR48934.1;transl_table=11 SOQE01000003.1 Genbank gene 30658 30810 . + . ID=gene-E3V84_00265;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V84_00265 SOQE01000003.1 Protein Homology CDS 30658 30810 . + 0 ID=cds-TMR48935.1;Parent=gene-E3V84_00265;Dbxref=NCBI_GP:TMR48935.1;Name=TMR48935.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359414.1;locus_tag=E3V84_00265;product=50S ribosomal protein L33;protein_id=TMR48935.1;transl_table=11 SOQE01000003.1 Genbank gene 30820 30996 . + . ID=gene-E3V84_00270;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=E3V84_00270 SOQE01000003.1 Protein Homology CDS 30820 30996 . + 0 ID=cds-TMR48936.1;Parent=gene-E3V84_00270;Dbxref=NCBI_GP:TMR48936.1;Name=TMR48936.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359413.1;locus_tag=E3V84_00270;product=preprotein translocase subunit SecE;protein_id=TMR48936.1;transl_table=11 SOQE01000003.1 Genbank gene 31051 31587 . + . ID=gene-E3V84_00275;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=E3V84_00275 SOQE01000003.1 Protein Homology CDS 31051 31587 . + 0 ID=cds-TMR48937.1;Parent=gene-E3V84_00275;Dbxref=NCBI_GP:TMR48937.1;Name=TMR48937.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376740.1;locus_tag=E3V84_00275;product=transcription termination/antitermination protein NusG;protein_id=TMR48937.1;transl_table=11 SOQE01000003.1 Genbank gene 31708 32187 . + . ID=gene-E3V84_00280;Name=E3V84_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00280 SOQE01000003.1 Protein Homology CDS 31708 32187 . + 0 ID=cds-TMR48938.1;Parent=gene-E3V84_00280;Dbxref=NCBI_GP:TMR48938.1;Name=TMR48938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357607.1;locus_tag=E3V84_00280;product=sigma-70 family RNA polymerase sigma factor;protein_id=TMR48938.1;transl_table=11 SOQE01000003.1 Genbank gene 32281 32352 . + . ID=gene-E3V84_00285;Name=E3V84_00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_00285 SOQE01000003.1 tRNAscan-SE tRNA 32281 32352 . + . ID=rna-E3V84_00285;Parent=gene-E3V84_00285;anticodon=(pos:32314..32316);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_00285;product=tRNA-Glu SOQE01000003.1 tRNAscan-SE exon 32281 32352 . + . ID=exon-E3V84_00285-1;Parent=rna-E3V84_00285;anticodon=(pos:32314..32316);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_00285;product=tRNA-Glu SOQE01000003.1 Genbank gene 32594 32654 . + . ID=gene-E3V84_00290;Name=E3V84_00290;end_range=32654,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V84_00290;partial=true SOQE01000003.1 Genbank rRNA 32594 32654 . + . ID=rna-E3V84_00290;Parent=gene-E3V84_00290;end_range=32654,.;gbkey=rRNA;locus_tag=E3V84_00290;partial=true;product=16S ribosomal RNA SOQE01000003.1 Genbank exon 32594 32654 . + . ID=exon-E3V84_00290-1;Parent=rna-E3V84_00290;end_range=32654,.;gbkey=rRNA;locus_tag=E3V84_00290;partial=true;product=16S ribosomal RNA ##sequence-region SOQE01000030.1 1 44675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000030.1 Genbank region 1 44675 . + . ID=SOQE01000030.1:1..44675;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000030.1 Genbank gene 34 630 . + . ID=gene-E3V84_03360;Name=E3V84_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03360 SOQE01000030.1 Protein Homology CDS 34 630 . + 0 ID=cds-TMR47502.1;Parent=gene-E3V84_03360;Dbxref=NCBI_GP:TMR47502.1;Name=TMR47502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687786.1;locus_tag=E3V84_03360;product=ATP-binding cassette domain-containing protein;protein_id=TMR47502.1;transl_table=11 SOQE01000030.1 Genbank gene 611 1102 . + . ID=gene-E3V84_03365;Name=E3V84_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03365 SOQE01000030.1 Protein Homology CDS 611 1102 . + 0 ID=cds-TMR47503.1;Parent=gene-E3V84_03365;Dbxref=NCBI_GP:TMR47503.1;Name=TMR47503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671992.1;locus_tag=E3V84_03365;product=hypothetical protein;protein_id=TMR47503.1;transl_table=11 SOQE01000030.1 Genbank gene 1484 3637 . + . ID=gene-E3V84_03370;Name=E3V84_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03370 SOQE01000030.1 Protein Homology CDS 1484 3637 . + 0 ID=cds-TMR47504.1;Parent=gene-E3V84_03370;Dbxref=NCBI_GP:TMR47504.1;Name=TMR47504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445235.1;locus_tag=E3V84_03370;product=peptide cleavage/export ABC transporter;protein_id=TMR47504.1;transl_table=11 SOQE01000030.1 Genbank gene 3650 4999 . + . ID=gene-E3V84_03375;Name=E3V84_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03375 SOQE01000030.1 Protein Homology CDS 3650 4999 . + 0 ID=cds-TMR47505.1;Parent=gene-E3V84_03375;Dbxref=NCBI_GP:TMR47505.1;Name=TMR47505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445236.1;locus_tag=E3V84_03375;product=HlyD family secretion protein;protein_id=TMR47505.1;transl_table=11 SOQE01000030.1 Genbank gene 5127 5876 . + . ID=gene-E3V84_03380;Name=E3V84_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03380 SOQE01000030.1 Protein Homology CDS 5127 5876 . + 0 ID=cds-TMR47506.1;Parent=gene-E3V84_03380;Dbxref=NCBI_GP:TMR47506.1;Name=TMR47506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357639.1;locus_tag=E3V84_03380;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TMR47506.1;transl_table=11 SOQE01000030.1 Genbank gene 5878 6021 . + . ID=gene-E3V84_03385;Name=E3V84_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03385 SOQE01000030.1 Protein Homology CDS 5878 6021 . + 0 ID=cds-TMR47540.1;Parent=gene-E3V84_03385;Dbxref=NCBI_GP:TMR47540.1;Name=TMR47540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429437.1;locus_tag=E3V84_03385;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TMR47540.1;transl_table=11 SOQE01000030.1 Genbank gene 6078 9803 . + . ID=gene-E3V84_03390;Name=E3V84_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03390 SOQE01000030.1 Protein Homology CDS 6078 9803 . + 0 ID=cds-TMR47507.1;Parent=gene-E3V84_03390;Dbxref=NCBI_GP:TMR47507.1;Name=TMR47507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445238.1;locus_tag=E3V84_03390;product=phosphoribosylformylglycinamidine synthase;protein_id=TMR47507.1;transl_table=11 SOQE01000030.1 Genbank gene 9963 11405 . + . ID=gene-E3V84_03395;Name=E3V84_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03395 SOQE01000030.1 Protein Homology CDS 9963 11405 . + 0 ID=cds-TMR47508.1;Parent=gene-E3V84_03395;Dbxref=NCBI_GP:TMR47508.1;Name=TMR47508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445239.1;locus_tag=E3V84_03395;product=amidophosphoribosyltransferase;protein_id=TMR47508.1;transl_table=11 SOQE01000030.1 Genbank gene 11623 12645 . + . ID=gene-E3V84_03400;Name=E3V84_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03400 SOQE01000030.1 Protein Homology CDS 11623 12645 . + 0 ID=cds-TMR47509.1;Parent=gene-E3V84_03400;Dbxref=NCBI_GP:TMR47509.1;Name=TMR47509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445240.1;locus_tag=E3V84_03400;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=TMR47509.1;transl_table=11 SOQE01000030.1 Genbank gene 12642 13196 . + . ID=gene-E3V84_03405;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=E3V84_03405 SOQE01000030.1 Protein Homology CDS 12642 13196 . + 0 ID=cds-TMR47510.1;Parent=gene-E3V84_03405;Dbxref=NCBI_GP:TMR47510.1;Name=TMR47510.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717485.1;locus_tag=E3V84_03405;product=phosphoribosylglycinamide formyltransferase;protein_id=TMR47510.1;transl_table=11 SOQE01000030.1 Genbank gene 13193 13567 . + . ID=gene-E3V84_03410;Name=E3V84_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03410 SOQE01000030.1 Protein Homology CDS 13193 13567 . + 0 ID=cds-TMR47511.1;Parent=gene-E3V84_03410;Dbxref=NCBI_GP:TMR47511.1;Name=TMR47511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218874.1;locus_tag=E3V84_03410;product=hypothetical protein;protein_id=TMR47511.1;transl_table=11 SOQE01000030.1 Genbank gene 13611 14075 . + . ID=gene-E3V84_03415;Name=E3V84_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03415 SOQE01000030.1 Protein Homology CDS 13611 14075 . + 0 ID=cds-TMR47512.1;Parent=gene-E3V84_03415;Dbxref=NCBI_GP:TMR47512.1;Name=TMR47512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445242.1;locus_tag=E3V84_03415;product=GNAT family N-acetyltransferase;protein_id=TMR47512.1;transl_table=11 SOQE01000030.1 Genbank gene 14077 15624 . + . ID=gene-E3V84_03420;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=E3V84_03420 SOQE01000030.1 Protein Homology CDS 14077 15624 . + 0 ID=cds-TMR47513.1;Parent=gene-E3V84_03420;Dbxref=NCBI_GP:TMR47513.1;Name=TMR47513.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=E3V84_03420;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=TMR47513.1;transl_table=11 SOQE01000030.1 Genbank gene 15746 17008 . + . ID=gene-E3V84_03425;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=E3V84_03425 SOQE01000030.1 Protein Homology CDS 15746 17008 . + 0 ID=cds-TMR47514.1;Parent=gene-E3V84_03425;Dbxref=NCBI_GP:TMR47514.1;Name=TMR47514.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357646.1;locus_tag=E3V84_03425;product=phosphoribosylamine--glycine ligase;protein_id=TMR47514.1;transl_table=11 SOQE01000030.1 Genbank gene 17201 17692 . + . ID=gene-E3V84_03430;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=E3V84_03430 SOQE01000030.1 Protein Homology CDS 17201 17692 . + 0 ID=cds-TMR47515.1;Parent=gene-E3V84_03430;Dbxref=NCBI_GP:TMR47515.1;Name=TMR47515.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445245.1;locus_tag=E3V84_03430;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=TMR47515.1;transl_table=11 SOQE01000030.1 Genbank gene 17679 18770 . + . ID=gene-E3V84_03435;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=E3V84_03435 SOQE01000030.1 Protein Homology CDS 17679 18770 . + 0 ID=cds-TMR47516.1;Parent=gene-E3V84_03435;Dbxref=NCBI_GP:TMR47516.1;Name=TMR47516.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099033.1;locus_tag=E3V84_03435;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=TMR47516.1;transl_table=11 SOQE01000030.1 Genbank gene 18780 19007 . + . ID=gene-E3V84_03440;Name=E3V84_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03440 SOQE01000030.1 Protein Homology CDS 18780 19007 . + 0 ID=cds-TMR47517.1;Parent=gene-E3V84_03440;Dbxref=NCBI_GP:TMR47517.1;Name=TMR47517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357649.1;locus_tag=E3V84_03440;product=phosphoribosylaminoimidazole carboxylase;protein_id=TMR47517.1;transl_table=11 SOQE01000030.1 Genbank gene 19070 20368 . + . ID=gene-E3V84_03445;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=E3V84_03445 SOQE01000030.1 Protein Homology CDS 19070 20368 . + 0 ID=cds-TMR47518.1;Parent=gene-E3V84_03445;Dbxref=NCBI_GP:TMR47518.1;Name=TMR47518.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357650.1;locus_tag=E3V84_03445;product=adenylosuccinate lyase;protein_id=TMR47518.1;transl_table=11 SOQE01000030.1 Genbank gene 20423 24352 . - . ID=gene-E3V84_03450;Name=E3V84_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03450 SOQE01000030.1 Protein Homology CDS 20423 24352 . - 0 ID=cds-TMR47519.1;Parent=gene-E3V84_03450;Dbxref=NCBI_GP:TMR47519.1;Name=TMR47519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357651.1;locus_tag=E3V84_03450;product=YSIRK-type signal peptide-containing protein;protein_id=TMR47519.1;transl_table=11 SOQE01000030.1 Genbank gene 24668 25426 . - . ID=gene-E3V84_03455;Name=E3V84_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03455 SOQE01000030.1 Protein Homology CDS 24668 25426 . - 0 ID=cds-TMR47520.1;Parent=gene-E3V84_03455;Dbxref=NCBI_GP:TMR47520.1;Name=TMR47520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357652.1;locus_tag=E3V84_03455;product=GntR family transcriptional regulator;protein_id=TMR47520.1;transl_table=11 SOQE01000030.1 Genbank gene 25730 27517 . + . ID=gene-E3V84_03460;Name=E3V84_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03460 SOQE01000030.1 Protein Homology CDS 25730 27517 . + 0 ID=cds-TMR47521.1;Parent=gene-E3V84_03460;Dbxref=NCBI_GP:TMR47521.1;Name=TMR47521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357653.1;locus_tag=E3V84_03460;product=beta-galactosidase;protein_id=TMR47521.1;transl_table=11 SOQE01000030.1 Genbank gene 27514 27990 . + . ID=gene-E3V84_03465;Name=E3V84_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03465 SOQE01000030.1 Protein Homology CDS 27514 27990 . + 0 ID=cds-TMR47522.1;Parent=gene-E3V84_03465;Dbxref=NCBI_GP:TMR47522.1;Name=TMR47522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357654.1;locus_tag=E3V84_03465;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=TMR47522.1;transl_table=11 SOQE01000030.1 Genbank gene 28018 28923 . + . ID=gene-E3V84_03470;Name=E3V84_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03470 SOQE01000030.1 Protein Homology CDS 28018 28923 . + 0 ID=cds-TMR47523.1;Parent=gene-E3V84_03470;Dbxref=NCBI_GP:TMR47523.1;Name=TMR47523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357655.1;locus_tag=E3V84_03470;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=TMR47523.1;transl_table=11 SOQE01000030.1 Genbank gene 28910 29725 . + . ID=gene-E3V84_03475;Name=E3V84_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03475 SOQE01000030.1 Protein Homology CDS 28910 29725 . + 0 ID=cds-TMR47524.1;Parent=gene-E3V84_03475;Dbxref=NCBI_GP:TMR47524.1;Name=TMR47524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445253.1;locus_tag=E3V84_03475;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=TMR47524.1;transl_table=11 SOQE01000030.1 Genbank gene 29732 30136 . + . ID=gene-E3V84_03480;Name=E3V84_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03480 SOQE01000030.1 Protein Homology CDS 29732 30136 . + 0 ID=cds-TMR47525.1;Parent=gene-E3V84_03480;Dbxref=NCBI_GP:TMR47525.1;Name=TMR47525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445254.1;locus_tag=E3V84_03480;product=PTS sugar transporter subunit IIA;protein_id=TMR47525.1;transl_table=11 SOQE01000030.1 Genbank gene 30236 31402 . + . ID=gene-E3V84_03485;Name=E3V84_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03485 SOQE01000030.1 Protein Homology CDS 30236 31402 . + 0 ID=cds-TMR47526.1;Parent=gene-E3V84_03485;Dbxref=NCBI_GP:TMR47526.1;Name=TMR47526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445255.1;locus_tag=E3V84_03485;product=SIS domain-containing protein;protein_id=TMR47526.1;transl_table=11 SOQE01000030.1 Genbank gene 31518 32555 . + . ID=gene-E3V84_03490;Name=E3V84_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03490 SOQE01000030.1 Protein Homology CDS 31518 32555 . + 0 ID=cds-TMR47527.1;Parent=gene-E3V84_03490;Dbxref=NCBI_GP:TMR47527.1;Name=TMR47527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357659.1;locus_tag=E3V84_03490;product=galactose mutarotase;protein_id=TMR47527.1;transl_table=11 SOQE01000030.1 Genbank gene 32756 33610 . + . ID=gene-E3V84_03495;Name=E3V84_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03495 SOQE01000030.1 Protein Homology CDS 32756 33610 . + 0 ID=cds-TMR47528.1;Parent=gene-E3V84_03495;Dbxref=NCBI_GP:TMR47528.1;Name=TMR47528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357660.1;locus_tag=E3V84_03495;product=VOC family protein;protein_id=TMR47528.1;transl_table=11 SOQE01000030.1 Genbank gene 33751 34515 . + . ID=gene-E3V84_03500;Name=E3V84_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03500 SOQE01000030.1 Protein Homology CDS 33751 34515 . + 0 ID=cds-TMR47529.1;Parent=gene-E3V84_03500;Dbxref=NCBI_GP:TMR47529.1;Name=TMR47529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357662.1;locus_tag=E3V84_03500;product=phosphorylase;protein_id=TMR47529.1;transl_table=11 SOQE01000030.1 Genbank gene 34729 36108 . + . ID=gene-E3V84_03505;Name=E3V84_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03505 SOQE01000030.1 Protein Homology CDS 34729 36108 . + 0 ID=cds-TMR47530.1;Parent=gene-E3V84_03505;Dbxref=NCBI_GP:TMR47530.1;Name=TMR47530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357664.1;locus_tag=E3V84_03505;product=TrkH family potassium uptake protein;protein_id=TMR47530.1;transl_table=11 SOQE01000030.1 Genbank gene 36122 36787 . + . ID=gene-E3V84_03510;Name=E3V84_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03510 SOQE01000030.1 Protein Homology CDS 36122 36787 . + 0 ID=cds-TMR47531.1;Parent=gene-E3V84_03510;Dbxref=NCBI_GP:TMR47531.1;Name=TMR47531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283900.1;locus_tag=E3V84_03510;product=TrkA family potassium uptake protein;protein_id=TMR47531.1;transl_table=11 SOQE01000030.1 Genbank pseudogene 37030 37104 . - . ID=gene-E3V84_03515;Name=E3V84_03515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03515;pseudo=true SOQE01000030.1 Protein Homology CDS 37030 37104 . - 0 ID=cds-E3V84_03515;Parent=gene-E3V84_03515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_03515;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000030.1 Genbank gene 37141 38157 . + . ID=gene-E3V84_03520;Name=E3V84_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03520 SOQE01000030.1 Protein Homology CDS 37141 38157 . + 0 ID=cds-TMR47532.1;Parent=gene-E3V84_03520;Dbxref=NCBI_GP:TMR47532.1;Name=TMR47532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445261.1;locus_tag=E3V84_03520;product=glycosyltransferase family 2 protein;protein_id=TMR47532.1;transl_table=11 SOQE01000030.1 Genbank gene 38273 40516 . + . ID=gene-E3V84_03525;Name=E3V84_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03525 SOQE01000030.1 Protein Homology CDS 38273 40516 . + 0 ID=cds-TMR47533.1;Parent=gene-E3V84_03525;Dbxref=NCBI_GP:TMR47533.1;Name=TMR47533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445262.1;locus_tag=E3V84_03525;product=YSIRK-type signal peptide-containing protein;protein_id=TMR47533.1;transl_table=11 SOQE01000030.1 Genbank gene 40683 41381 . + . ID=gene-E3V84_03530;Name=E3V84_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03530 SOQE01000030.1 Protein Homology CDS 40683 41381 . + 0 ID=cds-TMR47534.1;Parent=gene-E3V84_03530;Dbxref=NCBI_GP:TMR47534.1;Name=TMR47534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445263.1;locus_tag=E3V84_03530;product=response regulator transcription factor;protein_id=TMR47534.1;transl_table=11 SOQE01000030.1 Genbank gene 41378 42430 . + . ID=gene-E3V84_03535;Name=E3V84_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03535 SOQE01000030.1 Protein Homology CDS 41378 42430 . + 0 ID=cds-TMR47535.1;Parent=gene-E3V84_03535;Dbxref=NCBI_GP:TMR47535.1;Name=TMR47535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445264.1;locus_tag=E3V84_03535;product=HAMP domain-containing histidine kinase;protein_id=TMR47535.1;transl_table=11 SOQE01000030.1 Genbank gene 42625 43236 . + . ID=gene-E3V84_03540;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=E3V84_03540 SOQE01000030.1 Protein Homology CDS 42625 43236 . + 0 ID=cds-TMR47536.1;Parent=gene-E3V84_03540;Dbxref=NCBI_GP:TMR47536.1;Name=TMR47536.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=E3V84_03540;product=30S ribosomal protein S4;protein_id=TMR47536.1;transl_table=11 SOQE01000030.1 Genbank gene 43400 43687 . + . ID=gene-E3V84_03545;Name=E3V84_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03545 SOQE01000030.1 Protein Homology CDS 43400 43687 . + 0 ID=cds-TMR47537.1;Parent=gene-E3V84_03545;Dbxref=NCBI_GP:TMR47537.1;Name=TMR47537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445269.1;locus_tag=E3V84_03545;product=hypothetical protein;protein_id=TMR47537.1;transl_table=11 SOQE01000030.1 Genbank gene 43677 44024 . + . ID=gene-E3V84_03550;Name=E3V84_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03550 SOQE01000030.1 Protein Homology CDS 43677 44024 . + 0 ID=cds-TMR47538.1;Parent=gene-E3V84_03550;Dbxref=NCBI_GP:TMR47538.1;Name=TMR47538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445270.1;locus_tag=E3V84_03550;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR47538.1;transl_table=11 SOQE01000030.1 Genbank gene 44449 44675 . - . ID=gene-E3V84_03555;Name=E3V84_03555;end_range=44675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03555;partial=true SOQE01000030.1 Protein Homology CDS 44449 44675 . - 2 ID=cds-TMR47539.1;Parent=gene-E3V84_03555;Dbxref=NCBI_GP:TMR47539.1;Name=TMR47539.1;end_range=44675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=E3V84_03555;partial=true;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR47539.1;transl_table=11 ##sequence-region SOQE01000031.1 1 1248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000031.1 Genbank region 1 1248 . + . ID=SOQE01000031.1:1..1248;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000031.1 Genbank gene 1 151 . - . ID=gene-E3V84_03560;Name=E3V84_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03560;partial=true;start_range=.,1 SOQE01000031.1 Protein Homology CDS 1 151 . - 0 ID=cds-TMR47454.1;Parent=gene-E3V84_03560;Dbxref=NCBI_GP:TMR47454.1;Name=TMR47454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862835.1;locus_tag=E3V84_03560;partial=true;product=hypothetical protein;protein_id=TMR47454.1;start_range=.,1;transl_table=11 SOQE01000031.1 Genbank gene 224 583 . - . ID=gene-E3V84_03565;Name=E3V84_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03565 SOQE01000031.1 Protein Homology CDS 224 583 . - 0 ID=cds-TMR47456.1;Parent=gene-E3V84_03565;Dbxref=NCBI_GP:TMR47456.1;Name=TMR47456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827621.1;locus_tag=E3V84_03565;product=GMP synthase;protein_id=TMR47456.1;transl_table=11 SOQE01000031.1 Genbank gene 957 1248 . - . ID=gene-E3V84_03570;Name=E3V84_03570;end_range=1248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03570;partial=true SOQE01000031.1 Protein Homology CDS 957 1248 . - 1 ID=cds-TMR47455.1;Parent=gene-E3V84_03570;Dbxref=NCBI_GP:TMR47455.1;Name=TMR47455.1;end_range=1248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237576.1;locus_tag=E3V84_03570;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR47455.1;transl_table=11 ##sequence-region SOQE01000032.1 1 7983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000032.1 Genbank region 1 7983 . + . ID=SOQE01000032.1:1..7983;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000032.1 Genbank gene 1 247 . - . ID=gene-E3V84_03575;Name=E3V84_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03575;partial=true;start_range=.,1 SOQE01000032.1 Protein Homology CDS 1 247 . - 0 ID=cds-TMR47423.1;Parent=gene-E3V84_03575;Dbxref=NCBI_GP:TMR47423.1;Name=TMR47423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359607.1;locus_tag=E3V84_03575;partial=true;product=transposase;protein_id=TMR47423.1;start_range=.,1;transl_table=11 SOQE01000032.1 Genbank pseudogene 287 516 . - . ID=gene-E3V84_03580;Name=E3V84_03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03580;pseudo=true SOQE01000032.1 Protein Homology CDS 287 516 . - 0 ID=cds-E3V84_03580;Parent=gene-E3V84_03580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358889.1;locus_tag=E3V84_03580;product=transposase;pseudo=true;transl_table=11 SOQE01000032.1 Genbank gene 1051 4332 . + . ID=gene-E3V84_03585;Name=E3V84_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03585 SOQE01000032.1 Genbank CDS 1051 4332 . + 0 ID=cds-TMR47424.1;Parent=gene-E3V84_03585;Dbxref=NCBI_GP:TMR47424.1;Name=TMR47424.1;gbkey=CDS;locus_tag=E3V84_03585;product=cell wall-binding protein;protein_id=TMR47424.1;transl_table=11 SOQE01000032.1 Genbank pseudogene 4536 4670 . + . ID=gene-E3V84_03590;Name=E3V84_03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03590;pseudo=true SOQE01000032.1 Protein Homology CDS 4536 4670 . + 0 ID=cds-E3V84_03590;Parent=gene-E3V84_03590;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359398.1;locus_tag=E3V84_03590;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11 SOQE01000032.1 Genbank pseudogene 4784 4993 . - . ID=gene-E3V84_03595;Name=E3V84_03595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03595;pseudo=true SOQE01000032.1 Protein Homology CDS 4784 4993 . - 0 ID=cds-E3V84_03595;Parent=gene-E3V84_03595;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844424.1;locus_tag=E3V84_03595;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000032.1 Genbank gene 4972 5745 . + . ID=gene-E3V84_03600;Name=E3V84_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03600 SOQE01000032.1 Protein Homology CDS 4972 5745 . + 0 ID=cds-TMR47418.1;Parent=gene-E3V84_03600;Dbxref=NCBI_GP:TMR47418.1;Name=TMR47418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359397.1;locus_tag=E3V84_03600;product=TatD family deoxyribonuclease;protein_id=TMR47418.1;transl_table=11 SOQE01000032.1 Genbank gene 5745 6305 . + . ID=gene-E3V84_03605;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=E3V84_03605 SOQE01000032.1 Protein Homology CDS 5745 6305 . + 0 ID=cds-TMR47419.1;Parent=gene-E3V84_03605;Dbxref=NCBI_GP:TMR47419.1;Name=TMR47419.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359396.1;locus_tag=E3V84_03605;product=ribonuclease M5;protein_id=TMR47419.1;transl_table=11 SOQE01000032.1 Genbank gene 6377 7276 . + . ID=gene-E3V84_03610;Name=E3V84_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03610 SOQE01000032.1 Protein Homology CDS 6377 7276 . + 0 ID=cds-TMR47420.1;Parent=gene-E3V84_03610;Dbxref=NCBI_GP:TMR47420.1;Name=TMR47420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359395.1;locus_tag=E3V84_03610;product=XRE family transcriptional regulator;protein_id=TMR47420.1;transl_table=11 SOQE01000032.1 Genbank gene 7596 7754 . - . ID=gene-E3V84_03615;Name=E3V84_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03615 SOQE01000032.1 Protein Homology CDS 7596 7754 . - 0 ID=cds-TMR47421.1;Parent=gene-E3V84_03615;Dbxref=NCBI_GP:TMR47421.1;Name=TMR47421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_03615;product=transposase domain-containing protein;protein_id=TMR47421.1;transl_table=11 SOQE01000032.1 Genbank gene 7825 7983 . - . ID=gene-E3V84_03620;Name=E3V84_03620;end_range=7983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03620;partial=true SOQE01000032.1 Protein Homology CDS 7825 7983 . - 0 ID=cds-TMR47422.1;Parent=gene-E3V84_03620;Dbxref=NCBI_GP:TMR47422.1;Name=TMR47422.1;end_range=7983,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03050.12;locus_tag=E3V84_03620;partial=true;product=IS66 family transposase;protein_id=TMR47422.1;transl_table=11 ##sequence-region SOQE01000033.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000033.1 Genbank region 1 550 . + . ID=SOQE01000033.1:1..550;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000033.1 Genbank gene 365 550 . + . ID=gene-E3V84_03625;Name=E3V84_03625;end_range=550,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03625;partial=true SOQE01000033.1 Protein Homology CDS 365 550 . + 0 ID=cds-TMR47417.1;Parent=gene-E3V84_03625;Dbxref=NCBI_GP:TMR47417.1;Name=TMR47417.1;end_range=550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_03625;partial=true;product=transposase;protein_id=TMR47417.1;transl_table=11 ##sequence-region SOQE01000034.1 1 885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000034.1 Genbank region 1 885 . + . ID=SOQE01000034.1:1..885;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000034.1 Genbank pseudogene 1 815 . - . ID=gene-E3V84_03630;Name=E3V84_03630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03630;pseudo=true SOQE01000034.1 Protein Homology CDS 1 815 . - 0 ID=cds-E3V84_03630;Parent=gene-E3V84_03630;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446457.1;locus_tag=E3V84_03630;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region SOQE01000035.1 1 9547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000035.1 Genbank region 1 9547 . + . ID=SOQE01000035.1:1..9547;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000035.1 Genbank gene 1 83 . - . ID=gene-E3V84_03635;Name=E3V84_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03635;partial=true;start_range=.,1 SOQE01000035.1 Protein Homology CDS 1 83 . - 0 ID=cds-TMR47326.1;Parent=gene-E3V84_03635;Dbxref=NCBI_GP:TMR47326.1;Name=TMR47326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445576.1;locus_tag=E3V84_03635;partial=true;product=DNA-binding protein;protein_id=TMR47326.1;start_range=.,1;transl_table=11 SOQE01000035.1 Genbank gene 80 340 . - . ID=gene-E3V84_03640;Name=E3V84_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03640 SOQE01000035.1 Protein Homology CDS 80 340 . - 0 ID=cds-TMR47305.1;Parent=gene-E3V84_03640;Dbxref=NCBI_GP:TMR47305.1;Name=TMR47305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=E3V84_03640;product=DUF1372 family protein;protein_id=TMR47305.1;transl_table=11 SOQE01000035.1 Genbank gene 337 813 . - . ID=gene-E3V84_03645;Name=E3V84_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03645 SOQE01000035.1 Protein Homology CDS 337 813 . - 0 ID=cds-TMR47306.1;Parent=gene-E3V84_03645;Dbxref=NCBI_GP:TMR47306.1;Name=TMR47306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502465.1;locus_tag=E3V84_03645;product=class I SAM-dependent methyltransferase;protein_id=TMR47306.1;transl_table=11 SOQE01000035.1 Genbank gene 813 1100 . - . ID=gene-E3V84_03650;Name=E3V84_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03650 SOQE01000035.1 Protein Homology CDS 813 1100 . - 0 ID=cds-TMR47307.1;Parent=gene-E3V84_03650;Dbxref=NCBI_GP:TMR47307.1;Name=TMR47307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194857.1;locus_tag=E3V84_03650;product=hypothetical protein;protein_id=TMR47307.1;transl_table=11 SOQE01000035.1 Genbank gene 1100 1591 . - . ID=gene-E3V84_03655;Name=E3V84_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03655 SOQE01000035.1 Protein Homology CDS 1100 1591 . - 0 ID=cds-TMR47308.1;Parent=gene-E3V84_03655;Dbxref=NCBI_GP:TMR47308.1;Name=TMR47308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021764.1;locus_tag=E3V84_03655;product=DUF1642 domain-containing protein;protein_id=TMR47308.1;transl_table=11 SOQE01000035.1 Genbank gene 1584 1772 . - . ID=gene-E3V84_03660;Name=E3V84_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03660 SOQE01000035.1 Protein Homology CDS 1584 1772 . - 0 ID=cds-TMR47309.1;Parent=gene-E3V84_03660;Dbxref=NCBI_GP:TMR47309.1;Name=TMR47309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105096.1;locus_tag=E3V84_03660;product=hypothetical protein;protein_id=TMR47309.1;transl_table=11 SOQE01000035.1 Genbank gene 1759 1926 . - . ID=gene-E3V84_03665;Name=E3V84_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03665 SOQE01000035.1 Protein Homology CDS 1759 1926 . - 0 ID=cds-TMR47310.1;Parent=gene-E3V84_03665;Dbxref=NCBI_GP:TMR47310.1;Name=TMR47310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=E3V84_03665;product=hypothetical protein;protein_id=TMR47310.1;transl_table=11 SOQE01000035.1 Genbank gene 1942 2367 . - . ID=gene-E3V84_03670;Name=E3V84_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03670 SOQE01000035.1 Protein Homology CDS 1942 2367 . - 0 ID=cds-TMR47311.1;Parent=gene-E3V84_03670;Dbxref=NCBI_GP:TMR47311.1;Name=TMR47311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158043.1;locus_tag=E3V84_03670;product=hypothetical protein;protein_id=TMR47311.1;transl_table=11 SOQE01000035.1 Genbank gene 2345 2707 . - . ID=gene-E3V84_03675;Name=E3V84_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03675 SOQE01000035.1 Protein Homology CDS 2345 2707 . - 0 ID=cds-TMR47312.1;Parent=gene-E3V84_03675;Dbxref=NCBI_GP:TMR47312.1;Name=TMR47312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284860.1;locus_tag=E3V84_03675;product=XRE family transcriptional regulator;protein_id=TMR47312.1;transl_table=11 SOQE01000035.1 Genbank gene 2720 3142 . - . ID=gene-E3V84_03680;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=E3V84_03680 SOQE01000035.1 Protein Homology CDS 2720 3142 . - 0 ID=cds-TMR47313.1;Parent=gene-E3V84_03680;Dbxref=NCBI_GP:TMR47313.1;Name=TMR47313.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083754.1;locus_tag=E3V84_03680;product=single-stranded DNA-binding protein;protein_id=TMR47313.1;transl_table=11 SOQE01000035.1 Genbank gene 3146 3769 . - . ID=gene-E3V84_03685;Name=E3V84_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03685 SOQE01000035.1 Protein Homology CDS 3146 3769 . - 0 ID=cds-TMR47314.1;Parent=gene-E3V84_03685;Dbxref=NCBI_GP:TMR47314.1;Name=TMR47314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163474.1;locus_tag=E3V84_03685;product=recombinase;protein_id=TMR47314.1;transl_table=11 SOQE01000035.1 Genbank gene 3780 4253 . - . ID=gene-E3V84_03690;Name=E3V84_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03690 SOQE01000035.1 Protein Homology CDS 3780 4253 . - 0 ID=cds-TMR47315.1;Parent=gene-E3V84_03690;Dbxref=NCBI_GP:TMR47315.1;Name=TMR47315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445560.1;locus_tag=E3V84_03690;product=siphovirus Gp157 family protein;protein_id=TMR47315.1;transl_table=11 SOQE01000035.1 Genbank gene 4822 5169 . - . ID=gene-E3V84_03695;Name=E3V84_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03695 SOQE01000035.1 Protein Homology CDS 4822 5169 . - 0 ID=cds-TMR47316.1;Parent=gene-E3V84_03695;Dbxref=NCBI_GP:TMR47316.1;Name=TMR47316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973630.1;locus_tag=E3V84_03695;product=hypothetical protein;protein_id=TMR47316.1;transl_table=11 SOQE01000035.1 Genbank gene 5169 5426 . - . ID=gene-E3V84_03700;Name=E3V84_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03700 SOQE01000035.1 Protein Homology CDS 5169 5426 . - 0 ID=cds-TMR47317.1;Parent=gene-E3V84_03700;Dbxref=NCBI_GP:TMR47317.1;Name=TMR47317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608473.1;locus_tag=E3V84_03700;product=hypothetical protein;protein_id=TMR47317.1;transl_table=11 SOQE01000035.1 Genbank gene 5514 5780 . - . ID=gene-E3V84_03705;Name=E3V84_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03705 SOQE01000035.1 Protein Homology CDS 5514 5780 . - 0 ID=cds-TMR47318.1;Parent=gene-E3V84_03705;Dbxref=NCBI_GP:TMR47318.1;Name=TMR47318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450962.1;locus_tag=E3V84_03705;product=hypothetical protein;protein_id=TMR47318.1;transl_table=11 SOQE01000035.1 Genbank gene 5899 6138 . + . ID=gene-E3V84_03710;Name=E3V84_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03710 SOQE01000035.1 Protein Homology CDS 5899 6138 . + 0 ID=cds-TMR47319.1;Parent=gene-E3V84_03710;Dbxref=NCBI_GP:TMR47319.1;Name=TMR47319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134992.1;locus_tag=E3V84_03710;product=hypothetical protein;protein_id=TMR47319.1;transl_table=11 SOQE01000035.1 Genbank gene 6558 6725 . + . ID=gene-E3V84_03715;Name=E3V84_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03715 SOQE01000035.1 Protein Homology CDS 6558 6725 . + 0 ID=cds-TMR47320.1;Parent=gene-E3V84_03715;Dbxref=NCBI_GP:TMR47320.1;Name=TMR47320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397654.1;locus_tag=E3V84_03715;product=YjzC family protein;protein_id=TMR47320.1;transl_table=11 SOQE01000035.1 Genbank gene 7017 7235 . - . ID=gene-E3V84_03720;Name=E3V84_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03720 SOQE01000035.1 Protein Homology CDS 7017 7235 . - 0 ID=cds-TMR47321.1;Parent=gene-E3V84_03720;Dbxref=NCBI_GP:TMR47321.1;Name=TMR47321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152772.1;locus_tag=E3V84_03720;product=hypothetical protein;protein_id=TMR47321.1;transl_table=11 SOQE01000035.1 Genbank gene 7174 8028 . - . ID=gene-E3V84_03725;Name=E3V84_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03725 SOQE01000035.1 Protein Homology CDS 7174 8028 . - 0 ID=cds-TMR47322.1;Parent=gene-E3V84_03725;Dbxref=NCBI_GP:TMR47322.1;Name=TMR47322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203052.1;locus_tag=E3V84_03725;product=ATP-binding protein;protein_id=TMR47322.1;transl_table=11 SOQE01000035.1 Genbank gene 8038 8880 . - . ID=gene-E3V84_03730;Name=E3V84_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03730 SOQE01000035.1 Protein Homology CDS 8038 8880 . - 0 ID=cds-TMR47323.1;Parent=gene-E3V84_03730;Dbxref=NCBI_GP:TMR47323.1;Name=TMR47323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236631.1;locus_tag=E3V84_03730;product=DnaD domain protein;protein_id=TMR47323.1;transl_table=11 SOQE01000035.1 Genbank gene 8920 9132 . - . ID=gene-E3V84_03735;Name=E3V84_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03735 SOQE01000035.1 Protein Homology CDS 8920 9132 . - 0 ID=cds-TMR47324.1;Parent=gene-E3V84_03735;Dbxref=NCBI_GP:TMR47324.1;Name=TMR47324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169630.1;locus_tag=E3V84_03735;product=XRE family transcriptional regulator;protein_id=TMR47324.1;transl_table=11 SOQE01000035.1 Genbank gene 9145 9330 . - . ID=gene-E3V84_03740;Name=E3V84_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03740 SOQE01000035.1 Protein Homology CDS 9145 9330 . - 0 ID=cds-TMR47325.1;Parent=gene-E3V84_03740;Dbxref=NCBI_GP:TMR47325.1;Name=TMR47325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263488.1;locus_tag=E3V84_03740;product=XRE family transcriptional regulator;protein_id=TMR47325.1;transl_table=11 ##sequence-region SOQE01000036.1 1 18450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000036.1 Genbank region 1 18450 . + . ID=SOQE01000036.1:1..18450;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000036.1 Genbank gene 252 581 . + . ID=gene-E3V84_03745;Name=E3V84_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03745 SOQE01000036.1 Protein Homology CDS 252 581 . + 0 ID=cds-TMR47278.1;Parent=gene-E3V84_03745;Dbxref=NCBI_GP:TMR47278.1;Name=TMR47278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191486.1;locus_tag=E3V84_03745;product=phage holin;protein_id=TMR47278.1;transl_table=11 SOQE01000036.1 Genbank gene 584 1540 . + . ID=gene-E3V84_03750;Name=E3V84_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03750 SOQE01000036.1 Protein Homology CDS 584 1540 . + 0 ID=cds-TMR47279.1;Parent=gene-E3V84_03750;Dbxref=NCBI_GP:TMR47279.1;Name=TMR47279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445618.1;locus_tag=E3V84_03750;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR47279.1;transl_table=11 SOQE01000036.1 Genbank gene 1717 1923 . + . ID=gene-E3V84_03755;Name=E3V84_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03755 SOQE01000036.1 Protein Homology CDS 1717 1923 . + 0 ID=cds-TMR47280.1;Parent=gene-E3V84_03755;Dbxref=NCBI_GP:TMR47280.1;Name=TMR47280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917045.1;locus_tag=E3V84_03755;product=hypothetical protein;protein_id=TMR47280.1;transl_table=11 SOQE01000036.1 Genbank gene 1907 2338 . + . ID=gene-E3V84_03760;Name=E3V84_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03760 SOQE01000036.1 Protein Homology CDS 1907 2338 . + 0 ID=cds-TMR47281.1;Parent=gene-E3V84_03760;Dbxref=NCBI_GP:TMR47281.1;Name=TMR47281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379281.1;locus_tag=E3V84_03760;product=DUF2335 domain-containing protein;protein_id=TMR47281.1;transl_table=11 SOQE01000036.1 Genbank gene 2525 2713 . - . ID=gene-E3V84_03765;Name=E3V84_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03765 SOQE01000036.1 Protein Homology CDS 2525 2713 . - 0 ID=cds-TMR47282.1;Parent=gene-E3V84_03765;Dbxref=NCBI_GP:TMR47282.1;Name=TMR47282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260128.1;locus_tag=E3V84_03765;product=hypothetical protein;protein_id=TMR47282.1;transl_table=11 SOQE01000036.1 Genbank gene 2867 3064 . + . ID=gene-E3V84_03770;Name=E3V84_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03770 SOQE01000036.1 Protein Homology CDS 2867 3064 . + 0 ID=cds-TMR47283.1;Parent=gene-E3V84_03770;Dbxref=NCBI_GP:TMR47283.1;Name=TMR47283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511309.1;locus_tag=E3V84_03770;product=hypothetical protein;protein_id=TMR47283.1;transl_table=11 SOQE01000036.1 Genbank gene 3412 4083 . + . ID=gene-E3V84_03775;Name=E3V84_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03775 SOQE01000036.1 Protein Homology CDS 3412 4083 . + 0 ID=cds-TMR47284.1;Parent=gene-E3V84_03775;Dbxref=NCBI_GP:TMR47284.1;Name=TMR47284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358598.1;locus_tag=E3V84_03775;product=GTP pyrophosphokinase family protein;protein_id=TMR47284.1;transl_table=11 SOQE01000036.1 Genbank gene 4067 4885 . + . ID=gene-E3V84_03780;Name=E3V84_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03780 SOQE01000036.1 Protein Homology CDS 4067 4885 . + 0 ID=cds-TMR47285.1;Parent=gene-E3V84_03780;Dbxref=NCBI_GP:TMR47285.1;Name=TMR47285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446292.1;locus_tag=E3V84_03780;product=NAD kinase;protein_id=TMR47285.1;transl_table=11 SOQE01000036.1 Genbank gene 4882 5778 . + . ID=gene-E3V84_03785;Name=E3V84_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03785 SOQE01000036.1 Protein Homology CDS 4882 5778 . + 0 ID=cds-TMR47286.1;Parent=gene-E3V84_03785;Dbxref=NCBI_GP:TMR47286.1;Name=TMR47286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446291.1;locus_tag=E3V84_03785;product=RluA family pseudouridine synthase;protein_id=TMR47286.1;transl_table=11 SOQE01000036.1 Genbank gene 5822 6796 . + . ID=gene-E3V84_03790;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=E3V84_03790 SOQE01000036.1 Protein Homology CDS 5822 6796 . + 0 ID=cds-TMR47287.1;Parent=gene-E3V84_03790;Dbxref=NCBI_GP:TMR47287.1;Name=TMR47287.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358601.1;locus_tag=E3V84_03790;product=phosphate acetyltransferase;protein_id=TMR47287.1;transl_table=11 SOQE01000036.1 Genbank gene 7138 7437 . - . ID=gene-E3V84_03795;Name=E3V84_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03795 SOQE01000036.1 Protein Homology CDS 7138 7437 . - 0 ID=cds-TMR47288.1;Parent=gene-E3V84_03795;Dbxref=NCBI_GP:TMR47288.1;Name=TMR47288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358604.1;locus_tag=E3V84_03795;product=YbaB/EbfC family nucleoid-associated protein;protein_id=TMR47288.1;transl_table=11 SOQE01000036.1 Genbank gene 7834 8532 . + . ID=gene-E3V84_03800;Name=E3V84_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03800 SOQE01000036.1 Protein Homology CDS 7834 8532 . + 0 ID=cds-TMR47289.1;Parent=gene-E3V84_03800;Dbxref=NCBI_GP:TMR47289.1;Name=TMR47289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358605.1;locus_tag=E3V84_03800;product=DUF1275 domain-containing protein;protein_id=TMR47289.1;transl_table=11 SOQE01000036.1 Genbank gene 8545 8640 . - . ID=gene-E3V84_03805;Name=E3V84_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03805 SOQE01000036.1 Protein Homology CDS 8545 8640 . - 0 ID=cds-TMR47290.1;Parent=gene-E3V84_03805;Dbxref=NCBI_GP:TMR47290.1;Name=TMR47290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03128.12;locus_tag=E3V84_03805;product=hypothetical protein;protein_id=TMR47290.1;transl_table=11 SOQE01000036.1 Genbank gene 8752 9066 . + . ID=gene-E3V84_03810;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=E3V84_03810 SOQE01000036.1 Protein Homology CDS 8752 9066 . + 0 ID=cds-TMR47291.1;Parent=gene-E3V84_03810;Dbxref=NCBI_GP:TMR47291.1;Name=TMR47291.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=E3V84_03810;product=50S ribosomal protein L21;protein_id=TMR47291.1;transl_table=11 SOQE01000036.1 Genbank gene 9082 9426 . + . ID=gene-E3V84_03815;Name=E3V84_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03815 SOQE01000036.1 Protein Homology CDS 9082 9426 . + 0 ID=cds-TMR47292.1;Parent=gene-E3V84_03815;Dbxref=NCBI_GP:TMR47292.1;Name=TMR47292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613691.1;locus_tag=E3V84_03815;product=ribosomal-processing cysteine protease Prp;protein_id=TMR47292.1;transl_table=11 SOQE01000036.1 Genbank gene 9443 9736 . + . ID=gene-E3V84_03820;Name=E3V84_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03820 SOQE01000036.1 Protein Homology CDS 9443 9736 . + 0 ID=cds-TMR47293.1;Parent=gene-E3V84_03820;Dbxref=NCBI_GP:TMR47293.1;Name=TMR47293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=E3V84_03820;product=50S ribosomal protein L27;protein_id=TMR47293.1;transl_table=11 SOQE01000036.1 Genbank pseudogene 9942 10136 . - . ID=gene-E3V84_03825;Name=E3V84_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03825;pseudo=true SOQE01000036.1 Protein Homology CDS 9942 10136 . - 0 ID=cds-E3V84_03825;Parent=gene-E3V84_03825;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844775.1;locus_tag=E3V84_03825;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQE01000036.1 Genbank pseudogene 10137 10265 . - . ID=gene-E3V84_03830;Name=E3V84_03830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03830;pseudo=true SOQE01000036.1 Protein Homology CDS 10137 10265 . - 0 ID=cds-E3V84_03830;Parent=gene-E3V84_03830;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446195.1;locus_tag=E3V84_03830;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000036.1 Genbank gene 10572 11489 . + . ID=gene-E3V84_03835;Name=E3V84_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03835 SOQE01000036.1 Protein Homology CDS 10572 11489 . + 0 ID=cds-TMR47294.1;Parent=gene-E3V84_03835;Dbxref=NCBI_GP:TMR47294.1;Name=TMR47294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358611.1;locus_tag=E3V84_03835;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=TMR47294.1;transl_table=11 SOQE01000036.1 Genbank gene 11582 12430 . - . ID=gene-E3V84_03840;Name=E3V84_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03840 SOQE01000036.1 Protein Homology CDS 11582 12430 . - 0 ID=cds-TMR47295.1;Parent=gene-E3V84_03840;Dbxref=NCBI_GP:TMR47295.1;Name=TMR47295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358612.1;locus_tag=E3V84_03840;product=YitT family protein;protein_id=TMR47295.1;transl_table=11 SOQE01000036.1 Genbank gene 12572 13411 . + . ID=gene-E3V84_03845;Name=E3V84_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03845 SOQE01000036.1 Protein Homology CDS 12572 13411 . + 0 ID=cds-TMR47296.1;Parent=gene-E3V84_03845;Dbxref=NCBI_GP:TMR47296.1;Name=TMR47296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358613.1;locus_tag=E3V84_03845;product=DegV family protein;protein_id=TMR47296.1;transl_table=11 SOQE01000036.1 Genbank gene 13517 13792 . + . ID=gene-E3V84_03850;Name=E3V84_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03850 SOQE01000036.1 Protein Homology CDS 13517 13792 . + 0 ID=cds-TMR47297.1;Parent=gene-E3V84_03850;Dbxref=NCBI_GP:TMR47297.1;Name=TMR47297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358614.1;locus_tag=E3V84_03850;product=HU family DNA-binding protein;protein_id=TMR47297.1;transl_table=11 SOQE01000036.1 Genbank gene 14215 16116 . + . ID=gene-E3V84_03855;Name=E3V84_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03855 SOQE01000036.1 Protein Homology CDS 14215 16116 . + 0 ID=cds-TMR47298.1;Parent=gene-E3V84_03855;Dbxref=NCBI_GP:TMR47298.1;Name=TMR47298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358615.1;locus_tag=E3V84_03855;product=ABC transporter ATP-binding protein;protein_id=TMR47298.1;transl_table=11 SOQE01000036.1 Genbank gene 16119 16982 . + . ID=gene-E3V84_03860;Name=E3V84_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03860 SOQE01000036.1 Protein Homology CDS 16119 16982 . + 0 ID=cds-TMR47299.1;Parent=gene-E3V84_03860;Dbxref=NCBI_GP:TMR47299.1;Name=TMR47299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446282.1;locus_tag=E3V84_03860;product=MutR family transcriptional regulator;protein_id=TMR47299.1;transl_table=11 SOQE01000036.1 Genbank gene 17062 18240 . + . ID=gene-E3V84_03865;Name=E3V84_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03865 SOQE01000036.1 Protein Homology CDS 17062 18240 . + 0 ID=cds-TMR47300.1;Parent=gene-E3V84_03865;Dbxref=NCBI_GP:TMR47300.1;Name=TMR47300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446281.1;locus_tag=E3V84_03865;product=MFS transporter;protein_id=TMR47300.1;transl_table=11 ##sequence-region SOQE01000037.1 1 5337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000037.1 Genbank region 1 5337 . + . ID=SOQE01000037.1:1..5337;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000037.1 Genbank gene 15 563 . + . ID=gene-E3V84_03870;Name=E3V84_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03870 SOQE01000037.1 Protein Homology CDS 15 563 . + 0 ID=cds-TMR47234.1;Parent=gene-E3V84_03870;Dbxref=NCBI_GP:TMR47234.1;Name=TMR47234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335401.1;locus_tag=E3V84_03870;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR47234.1;transl_table=11 SOQE01000037.1 Genbank gene 574 1851 . + . ID=gene-E3V84_03875;Name=E3V84_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03875 SOQE01000037.1 Protein Homology CDS 574 1851 . + 0 ID=cds-TMR47235.1;Parent=gene-E3V84_03875;Dbxref=NCBI_GP:TMR47235.1;Name=TMR47235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926699.1;locus_tag=E3V84_03875;product=FRG domain-containing protein;protein_id=TMR47235.1;transl_table=11 SOQE01000037.1 Genbank gene 1967 3214 . - . ID=gene-E3V84_03880;Name=E3V84_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03880 SOQE01000037.1 Protein Homology CDS 1967 3214 . - 0 ID=cds-TMR47236.1;Parent=gene-E3V84_03880;Dbxref=NCBI_GP:TMR47236.1;Name=TMR47236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445272.1;locus_tag=E3V84_03880;product=toxic anion resistance protein;protein_id=TMR47236.1;transl_table=11 SOQE01000037.1 Genbank gene 3236 4042 . - . ID=gene-E3V84_03885;Name=E3V84_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03885 SOQE01000037.1 Protein Homology CDS 3236 4042 . - 0 ID=cds-TMR47237.1;Parent=gene-E3V84_03885;Dbxref=NCBI_GP:TMR47237.1;Name=TMR47237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445271.1;locus_tag=E3V84_03885;product=hypothetical protein;protein_id=TMR47237.1;transl_table=11 SOQE01000037.1 Genbank pseudogene 4704 5117 . - . ID=gene-E3V84_03890;Name=E3V84_03890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03890;pseudo=true SOQE01000037.1 Protein Homology CDS 4704 5117 . - 0 ID=cds-E3V84_03890;Parent=gene-E3V84_03890;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611511.1;locus_tag=E3V84_03890;product=IS3 family transposase;pseudo=true;transl_table=11 SOQE01000037.1 Genbank gene 5156 5337 . + . ID=gene-E3V84_03895;Name=E3V84_03895;end_range=5337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03895;partial=true SOQE01000037.1 Protein Homology CDS 5156 5337 . + 0 ID=cds-TMR47238.1;Parent=gene-E3V84_03895;Dbxref=NCBI_GP:TMR47238.1;Name=TMR47238.1;end_range=5337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_03895;partial=true;product=transposase;protein_id=TMR47238.1;transl_table=11 ##sequence-region SOQE01000038.1 1 24833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000038.1 Genbank region 1 24833 . + . ID=SOQE01000038.1:1..24833;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000038.1 Genbank pseudogene 1 774 . - . ID=gene-E3V84_03900;Name=E3V84_03900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03900;pseudo=true SOQE01000038.1 Protein Homology CDS 1 774 . - 0 ID=cds-E3V84_03900;Parent=gene-E3V84_03900;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_03900;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000038.1 Genbank gene 1162 2355 . + . ID=gene-E3V84_03905;Name=E3V84_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03905 SOQE01000038.1 Protein Homology CDS 1162 2355 . + 0 ID=cds-TMR47200.1;Parent=gene-E3V84_03905;Dbxref=NCBI_GP:TMR47200.1;Name=TMR47200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359300.1;locus_tag=E3V84_03905;product=O-antigen ligase family protein;protein_id=TMR47200.1;transl_table=11 SOQE01000038.1 Genbank pseudogene 2579 2743 . + . ID=gene-E3V84_03910;Name=E3V84_03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_03910;pseudo=true SOQE01000038.1 Protein Homology CDS 2579 2743 . + 0 ID=cds-E3V84_03910;Parent=gene-E3V84_03910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514203.1;locus_tag=E3V84_03910;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000038.1 Genbank gene 2792 2998 . + . ID=gene-E3V84_03915;Name=E3V84_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03915 SOQE01000038.1 Protein Homology CDS 2792 2998 . + 0 ID=cds-TMR47201.1;Parent=gene-E3V84_03915;Dbxref=NCBI_GP:TMR47201.1;Name=TMR47201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_03915;product=hypothetical protein;protein_id=TMR47201.1;transl_table=11 SOQE01000038.1 Genbank gene 3226 4011 . + . ID=gene-E3V84_03920;Name=E3V84_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03920 SOQE01000038.1 Protein Homology CDS 3226 4011 . + 0 ID=cds-TMR47202.1;Parent=gene-E3V84_03920;Dbxref=NCBI_GP:TMR47202.1;Name=TMR47202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595585.1;locus_tag=E3V84_03920;product=DUF2785 domain-containing protein;protein_id=TMR47202.1;transl_table=11 SOQE01000038.1 Genbank gene 4122 4790 . + . ID=gene-E3V84_03925;Name=E3V84_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03925 SOQE01000038.1 Protein Homology CDS 4122 4790 . + 0 ID=cds-TMR47203.1;Parent=gene-E3V84_03925;Dbxref=NCBI_GP:TMR47203.1;Name=TMR47203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445685.1;locus_tag=E3V84_03925;product=aquaporin;protein_id=TMR47203.1;transl_table=11 SOQE01000038.1 Genbank gene 4963 5454 . - . ID=gene-E3V84_03930;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=E3V84_03930 SOQE01000038.1 Protein Homology CDS 4963 5454 . - 0 ID=cds-TMR47204.1;Parent=gene-E3V84_03930;Dbxref=NCBI_GP:TMR47204.1;Name=TMR47204.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445686.1;locus_tag=E3V84_03930;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=TMR47204.1;transl_table=11 SOQE01000038.1 Genbank pseudogene 5473 6187 . - . ID=gene-E3V84_03935;Name=queE;gbkey=Gene;gene=queE;gene_biotype=pseudogene;locus_tag=E3V84_03935;pseudo=true SOQE01000038.1 Protein Homology CDS 5473 6187 . - 0 ID=cds-E3V84_03935;Parent=gene-E3V84_03935;Note=frameshifted;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445687.1;locus_tag=E3V84_03935;product=7-carboxy-7-deazaguanine synthase QueE;pseudo=true;transl_table=11 SOQE01000038.1 Genbank gene 6180 6623 . - . ID=gene-E3V84_03940;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=E3V84_03940 SOQE01000038.1 Protein Homology CDS 6180 6623 . - 0 ID=cds-TMR47205.1;Parent=gene-E3V84_03940;Dbxref=NCBI_GP:TMR47205.1;Name=TMR47205.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445688.1;locus_tag=E3V84_03940;product=6-carboxytetrahydropterin synthase QueD;protein_id=TMR47205.1;transl_table=11 SOQE01000038.1 Genbank gene 6623 7276 . - . ID=gene-E3V84_03945;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=E3V84_03945 SOQE01000038.1 Protein Homology CDS 6623 7276 . - 0 ID=cds-TMR47206.1;Parent=gene-E3V84_03945;Dbxref=NCBI_GP:TMR47206.1;Name=TMR47206.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256100.1;locus_tag=E3V84_03945;product=7-cyano-7-deazaguanine synthase QueC;protein_id=TMR47206.1;transl_table=11 SOQE01000038.1 Genbank gene 7478 7792 . - . ID=gene-E3V84_03950;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=E3V84_03950 SOQE01000038.1 Protein Homology CDS 7478 7792 . - 0 ID=cds-TMR47207.1;Parent=gene-E3V84_03950;Dbxref=NCBI_GP:TMR47207.1;Name=TMR47207.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445690.1;locus_tag=E3V84_03950;product=thioredoxin;protein_id=TMR47207.1;transl_table=11 SOQE01000038.1 Genbank gene 7809 8030 . - . ID=gene-E3V84_03955;Name=E3V84_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03955 SOQE01000038.1 Protein Homology CDS 7809 8030 . - 0 ID=cds-TMR47208.1;Parent=gene-E3V84_03955;Dbxref=NCBI_GP:TMR47208.1;Name=TMR47208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445691.1;locus_tag=E3V84_03955;product=DUF4649 family protein;protein_id=TMR47208.1;transl_table=11 SOQE01000038.1 Genbank gene 8130 8510 . - . ID=gene-E3V84_03960;Name=E3V84_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03960 SOQE01000038.1 Protein Homology CDS 8130 8510 . - 0 ID=cds-TMR47209.1;Parent=gene-E3V84_03960;Dbxref=NCBI_GP:TMR47209.1;Name=TMR47209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221621.1;locus_tag=E3V84_03960;product=MarR family transcriptional regulator;protein_id=TMR47209.1;transl_table=11 SOQE01000038.1 Genbank gene 8637 9605 . - . ID=gene-E3V84_03965;Name=E3V84_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03965 SOQE01000038.1 Protein Homology CDS 8637 9605 . - 0 ID=cds-TMR47210.1;Parent=gene-E3V84_03965;Dbxref=NCBI_GP:TMR47210.1;Name=TMR47210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028167.1;locus_tag=E3V84_03965;product=aromatic acid exporter family protein;protein_id=TMR47210.1;transl_table=11 SOQE01000038.1 Genbank gene 9779 10984 . - . ID=gene-E3V84_03970;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=E3V84_03970 SOQE01000038.1 Protein Homology CDS 9779 10984 . - 0 ID=cds-TMR47211.1;Parent=gene-E3V84_03970;Dbxref=NCBI_GP:TMR47211.1;Name=TMR47211.1;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446745.1;locus_tag=E3V84_03970;product=serine/threonine transporter SstT;protein_id=TMR47211.1;transl_table=11 SOQE01000038.1 Genbank gene 11078 11683 . + . ID=gene-E3V84_03975;Name=E3V84_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03975 SOQE01000038.1 Protein Homology CDS 11078 11683 . + 0 ID=cds-TMR47212.1;Parent=gene-E3V84_03975;Dbxref=NCBI_GP:TMR47212.1;Name=TMR47212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359189.1;locus_tag=E3V84_03975;product=mechanosensitive ion channel family protein;protein_id=TMR47212.1;transl_table=11 SOQE01000038.1 Genbank gene 11741 12649 . + . ID=gene-E3V84_03980;Name=E3V84_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03980 SOQE01000038.1 Protein Homology CDS 11741 12649 . + 0 ID=cds-TMR47213.1;Parent=gene-E3V84_03980;Dbxref=NCBI_GP:TMR47213.1;Name=TMR47213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359188.1;locus_tag=E3V84_03980;product=magnesium transporter CorA family protein;protein_id=TMR47213.1;transl_table=11 SOQE01000038.1 Genbank gene 12601 13191 . + . ID=gene-E3V84_03985;Name=E3V84_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_03985 SOQE01000038.1 Protein Homology CDS 12601 13191 . + 0 ID=cds-TMR47214.1;Parent=gene-E3V84_03985;Dbxref=NCBI_GP:TMR47214.1;Name=TMR47214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359187.1;locus_tag=E3V84_03985;product=YqeG family HAD IIIA-type phosphatase;protein_id=TMR47214.1;transl_table=11 SOQE01000038.1 Genbank gene 13194 14300 . + . ID=gene-E3V84_03990;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=E3V84_03990 SOQE01000038.1 Protein Homology CDS 13194 14300 . + 0 ID=cds-TMR47215.1;Parent=gene-E3V84_03990;Dbxref=NCBI_GP:TMR47215.1;Name=TMR47215.1;gbkey=CDS;gene=yqeH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446741.1;locus_tag=E3V84_03990;product=ribosome biogenesis GTPase YqeH;protein_id=TMR47215.1;transl_table=11 SOQE01000038.1 Genbank gene 14513 14824 . + . ID=gene-E3V84_03995;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=E3V84_03995 SOQE01000038.1 Protein Homology CDS 14513 14824 . + 0 ID=cds-TMR47216.1;Parent=gene-E3V84_03995;Dbxref=NCBI_GP:TMR47216.1;Name=TMR47216.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359185.1;locus_tag=E3V84_03995;product=ribosome assembly RNA-binding protein YhbY;protein_id=TMR47216.1;transl_table=11 SOQE01000038.1 Genbank gene 14876 15505 . + . ID=gene-E3V84_04000;Name=E3V84_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04000 SOQE01000038.1 Protein Homology CDS 14876 15505 . + 0 ID=cds-TMR47217.1;Parent=gene-E3V84_04000;Dbxref=NCBI_GP:TMR47217.1;Name=TMR47217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359184.1;locus_tag=E3V84_04000;product=nicotinate-nucleotide adenylyltransferase;protein_id=TMR47217.1;transl_table=11 SOQE01000038.1 Genbank gene 15505 16098 . + . ID=gene-E3V84_04005;Name=E3V84_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04005 SOQE01000038.1 Protein Homology CDS 15505 16098 . + 0 ID=cds-TMR47218.1;Parent=gene-E3V84_04005;Dbxref=NCBI_GP:TMR47218.1;Name=TMR47218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359183.1;locus_tag=E3V84_04005;product=HD domain-containing protein;protein_id=TMR47218.1;transl_table=11 SOQE01000038.1 Genbank gene 16099 16599 . + . ID=gene-E3V84_04010;Name=E3V84_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04010 SOQE01000038.1 Protein Homology CDS 16099 16599 . + 0 ID=cds-TMR47219.1;Parent=gene-E3V84_04010;Dbxref=NCBI_GP:TMR47219.1;Name=TMR47219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359182.1;locus_tag=E3V84_04010;product=cysteine hydrolase;protein_id=TMR47219.1;transl_table=11 SOQE01000038.1 Genbank gene 16612 16965 . + . ID=gene-E3V84_04015;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=E3V84_04015 SOQE01000038.1 Protein Homology CDS 16612 16965 . + 0 ID=cds-TMR47220.1;Parent=gene-E3V84_04015;Dbxref=NCBI_GP:TMR47220.1;Name=TMR47220.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359181.1;locus_tag=E3V84_04015;product=ribosome silencing factor;protein_id=TMR47220.1;transl_table=11 SOQE01000038.1 Genbank gene 17070 17816 . + . ID=gene-E3V84_04020;Name=E3V84_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04020 SOQE01000038.1 Protein Homology CDS 17070 17816 . + 0 ID=cds-TMR47221.1;Parent=gene-E3V84_04020;Dbxref=NCBI_GP:TMR47221.1;Name=TMR47221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359180.1;locus_tag=E3V84_04020;product=class I SAM-dependent methyltransferase;protein_id=TMR47221.1;transl_table=11 SOQE01000038.1 Genbank gene 17826 18923 . + . ID=gene-E3V84_04025;Name=E3V84_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04025 SOQE01000038.1 Protein Homology CDS 17826 18923 . + 0 ID=cds-TMR47222.1;Parent=gene-E3V84_04025;Dbxref=NCBI_GP:TMR47222.1;Name=TMR47222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359179.1;locus_tag=E3V84_04025;product=nucleotidyltransferase;protein_id=TMR47222.1;transl_table=11 SOQE01000038.1 Genbank pseudogene 19078 19152 . - . ID=gene-E3V84_04030;Name=E3V84_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04030;pseudo=true SOQE01000038.1 Protein Homology CDS 19078 19152 . - 0 ID=cds-E3V84_04030;Parent=gene-E3V84_04030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_04030;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000038.1 Genbank gene 19213 19506 . + . ID=gene-E3V84_04035;Name=E3V84_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04035 SOQE01000038.1 Protein Homology CDS 19213 19506 . + 0 ID=cds-TMR47223.1;Parent=gene-E3V84_04035;Dbxref=NCBI_GP:TMR47223.1;Name=TMR47223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359178.1;locus_tag=E3V84_04035;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=TMR47223.1;transl_table=11 SOQE01000038.1 Genbank gene 19510 19764 . + . ID=gene-E3V84_04040;Name=E3V84_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04040 SOQE01000038.1 Protein Homology CDS 19510 19764 . + 0 ID=cds-TMR47224.1;Parent=gene-E3V84_04040;Dbxref=NCBI_GP:TMR47224.1;Name=TMR47224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359177.1;locus_tag=E3V84_04040;product=Txe/YoeB family addiction module toxin;protein_id=TMR47224.1;transl_table=11 SOQE01000038.1 Genbank gene 19980 20114 . + . ID=gene-E3V84_04045;Name=E3V84_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04045 SOQE01000038.1 Protein Homology CDS 19980 20114 . + 0 ID=cds-TMR47225.1;Parent=gene-E3V84_04045;Dbxref=NCBI_GP:TMR47225.1;Name=TMR47225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001815749.1;locus_tag=E3V84_04045;product=restriction endonuclease;protein_id=TMR47225.1;transl_table=11 SOQE01000038.1 Genbank pseudogene 20126 20626 . + . ID=gene-E3V84_04050;Name=E3V84_04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04050;pseudo=true SOQE01000038.1 Protein Homology CDS 20126 20626 . + 0 ID=cds-E3V84_04050;Parent=gene-E3V84_04050;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004832657.1;locus_tag=E3V84_04050;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000038.1 Genbank gene 20724 21509 . + . ID=gene-E3V84_04055;Name=E3V84_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04055 SOQE01000038.1 Protein Homology CDS 20724 21509 . + 0 ID=cds-TMR47226.1;Parent=gene-E3V84_04055;Dbxref=NCBI_GP:TMR47226.1;Name=TMR47226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669600.1;locus_tag=E3V84_04055;product=hypothetical protein;protein_id=TMR47226.1;transl_table=11 SOQE01000038.1 Genbank gene 21610 21930 . + . ID=gene-E3V84_04060;Name=E3V84_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04060 SOQE01000038.1 Protein Homology CDS 21610 21930 . + 0 ID=cds-TMR47227.1;Parent=gene-E3V84_04060;Dbxref=NCBI_GP:TMR47227.1;Name=TMR47227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451507.1;locus_tag=E3V84_04060;product=recombinase;protein_id=TMR47227.1;transl_table=11 SOQE01000038.1 Genbank gene 21982 23595 . + . ID=gene-E3V84_04065;Name=E3V84_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04065 SOQE01000038.1 Protein Homology CDS 21982 23595 . + 0 ID=cds-TMR47228.1;Parent=gene-E3V84_04065;Dbxref=NCBI_GP:TMR47228.1;Name=TMR47228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359176.1;locus_tag=E3V84_04065;product=ribonuclease Y;protein_id=TMR47228.1;transl_table=11 SOQE01000038.1 Genbank gene 23764 23949 . + . ID=gene-E3V84_04070;Name=E3V84_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04070 SOQE01000038.1 Protein Homology CDS 23764 23949 . + 0 ID=cds-TMR47229.1;Parent=gene-E3V84_04070;Dbxref=NCBI_GP:TMR47229.1;Name=TMR47229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V84_04070;product=hypothetical protein;protein_id=TMR47229.1;transl_table=11 SOQE01000038.1 Genbank gene 23930 24280 . + . ID=gene-E3V84_04075;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=E3V84_04075 SOQE01000038.1 Protein Homology CDS 23930 24280 . + 0 ID=cds-TMR47230.1;Parent=gene-E3V84_04075;Dbxref=NCBI_GP:TMR47230.1;Name=TMR47230.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_04075;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR47230.1;transl_table=11 SOQE01000038.1 Genbank gene 24334 24540 . + . ID=gene-E3V84_04080;Name=E3V84_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04080 SOQE01000038.1 Protein Homology CDS 24334 24540 . + 0 ID=cds-TMR47231.1;Parent=gene-E3V84_04080;Dbxref=NCBI_GP:TMR47231.1;Name=TMR47231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=E3V84_04080;product=transposase;protein_id=TMR47231.1;transl_table=11 SOQE01000038.1 Genbank gene 24443 24833 . + . ID=gene-E3V84_04085;Name=E3V84_04085;end_range=24833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04085;partial=true SOQE01000038.1 Protein Homology CDS 24443 24833 . + 0 ID=cds-TMR47232.1;Parent=gene-E3V84_04085;Dbxref=NCBI_GP:TMR47232.1;Name=TMR47232.1;end_range=24833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=E3V84_04085;partial=true;product=transposase;protein_id=TMR47232.1;transl_table=11 ##sequence-region SOQE01000039.1 1 12535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000039.1 Genbank region 1 12535 . + . ID=SOQE01000039.1:1..12535;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000039.1 Genbank gene 1 156 . + . ID=gene-E3V84_04090;Name=E3V84_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04090;partial=true;start_range=.,1 SOQE01000039.1 Protein Homology CDS 1 156 . + 0 ID=cds-TMR47066.1;Parent=gene-E3V84_04090;Dbxref=NCBI_GP:TMR47066.1;Name=TMR47066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_04090;partial=true;product=IS630 family transposase;protein_id=TMR47066.1;start_range=.,1;transl_table=11 SOQE01000039.1 Genbank gene 43 489 . - . ID=gene-E3V84_04095;Name=E3V84_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04095 SOQE01000039.1 Protein Homology CDS 43 489 . - 0 ID=cds-TMR47067.1;Parent=gene-E3V84_04095;Dbxref=NCBI_GP:TMR47067.1;Name=TMR47067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_04095;product=helix-turn-helix domain-containing protein;protein_id=TMR47067.1;transl_table=11 SOQE01000039.1 Genbank gene 965 1378 . - . ID=gene-E3V84_04100;Name=E3V84_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04100 SOQE01000039.1 Protein Homology CDS 965 1378 . - 0 ID=cds-TMR47068.1;Parent=gene-E3V84_04100;Dbxref=NCBI_GP:TMR47068.1;Name=TMR47068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446356.1;locus_tag=E3V84_04100;product=hypothetical protein;protein_id=TMR47068.1;transl_table=11 SOQE01000039.1 Genbank gene 1392 4469 . - . ID=gene-E3V84_04105;Name=E3V84_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04105 SOQE01000039.1 Protein Homology CDS 1392 4469 . - 0 ID=cds-TMR47069.1;Parent=gene-E3V84_04105;Dbxref=NCBI_GP:TMR47069.1;Name=TMR47069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446357.1;locus_tag=E3V84_04105;product=DEAD/DEAH box helicase;protein_id=TMR47069.1;transl_table=11 SOQE01000039.1 Genbank gene 4501 5205 . - . ID=gene-E3V84_04110;Name=E3V84_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04110 SOQE01000039.1 Protein Homology CDS 4501 5205 . - 0 ID=cds-TMR47070.1;Parent=gene-E3V84_04110;Dbxref=NCBI_GP:TMR47070.1;Name=TMR47070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033631.1;locus_tag=E3V84_04110;product=SLATT domain-containing protein;protein_id=TMR47070.1;transl_table=11 SOQE01000039.1 Genbank gene 5207 6895 . - . ID=gene-E3V84_04115;Name=E3V84_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04115 SOQE01000039.1 Protein Homology CDS 5207 6895 . - 0 ID=cds-TMR47076.1;Parent=gene-E3V84_04115;Dbxref=NCBI_GP:TMR47076.1;Name=TMR47076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349001.1;locus_tag=E3V84_04115;product=site-specific DNA-methyltransferase;protein_id=TMR47076.1;transl_table=11 SOQE01000039.1 Genbank gene 7521 9092 . - . ID=gene-E3V84_04120;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=E3V84_04120 SOQE01000039.1 Protein Homology CDS 7521 9092 . - 0 ID=cds-TMR47071.1;Parent=gene-E3V84_04120;Dbxref=NCBI_GP:TMR47071.1;Name=TMR47071.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358759.1;locus_tag=E3V84_04120;product=signal recognition particle protein;protein_id=TMR47071.1;transl_table=11 SOQE01000039.1 Genbank gene 9104 9436 . - . ID=gene-E3V84_04125;Name=E3V84_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04125 SOQE01000039.1 Protein Homology CDS 9104 9436 . - 0 ID=cds-TMR47072.1;Parent=gene-E3V84_04125;Dbxref=NCBI_GP:TMR47072.1;Name=TMR47072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446363.1;locus_tag=E3V84_04125;product=putative DNA-binding protein;protein_id=TMR47072.1;transl_table=11 SOQE01000039.1 Genbank gene 9527 9904 . - . ID=gene-E3V84_04130;Name=E3V84_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04130 SOQE01000039.1 Protein Homology CDS 9527 9904 . - 0 ID=cds-TMR47073.1;Parent=gene-E3V84_04130;Dbxref=NCBI_GP:TMR47073.1;Name=TMR47073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358761.1;locus_tag=E3V84_04130;product=DUF1934 domain-containing protein;protein_id=TMR47073.1;transl_table=11 SOQE01000039.1 Genbank gene 9976 11280 . + . ID=gene-E3V84_04135;Name=E3V84_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04135 SOQE01000039.1 Protein Homology CDS 9976 11280 . + 0 ID=cds-TMR47074.1;Parent=gene-E3V84_04135;Dbxref=NCBI_GP:TMR47074.1;Name=TMR47074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446365.1;locus_tag=E3V84_04135;product=HD domain-containing protein;protein_id=TMR47074.1;transl_table=11 SOQE01000039.1 Genbank gene 11293 12099 . + . ID=gene-E3V84_04140;Name=E3V84_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04140 SOQE01000039.1 Protein Homology CDS 11293 12099 . + 0 ID=cds-TMR47075.1;Parent=gene-E3V84_04140;Dbxref=NCBI_GP:TMR47075.1;Name=TMR47075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358763.1;locus_tag=E3V84_04140;product=sugar-phosphatase;protein_id=TMR47075.1;transl_table=11 SOQE01000039.1 Genbank pseudogene 12306 12413 . - . ID=gene-E3V84_04145;Name=E3V84_04145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04145;pseudo=true SOQE01000039.1 Protein Homology CDS 12306 12413 . - 0 ID=cds-E3V84_04145;Parent=gene-E3V84_04145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=E3V84_04145;product=site-specific recombinase;pseudo=true;transl_table=11 SOQE01000039.1 Genbank gene 12449 12535 . + . ID=gene-E3V84_04150;Name=E3V84_04150;end_range=12535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04150;partial=true SOQE01000039.1 Protein Homology CDS 12449 12535 . + 0 ID=cds-TMR47077.1;Parent=gene-E3V84_04150;Dbxref=NCBI_GP:TMR47077.1;Name=TMR47077.1;end_range=12535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_04150;partial=true;product=IS5/IS1182 family transposase;protein_id=TMR47077.1;transl_table=11 ##sequence-region SOQE01000004.1 1 16768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000004.1 Genbank region 1 16768 . + . ID=SOQE01000004.1:1..16768;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000004.1 Genbank gene 1 1228 . - . ID=gene-E3V84_00295;Name=E3V84_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00295;partial=true;start_range=.,1 SOQE01000004.1 Protein Homology CDS 1 1228 . - 0 ID=cds-TMR48830.1;Parent=gene-E3V84_00295;Dbxref=NCBI_GP:TMR48830.1;Name=TMR48830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=E3V84_00295;partial=true;product=hypothetical protein;protein_id=TMR48830.1;start_range=.,1;transl_table=11 SOQE01000004.1 Genbank gene 1225 1923 . - . ID=gene-E3V84_00300;Name=E3V84_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00300 SOQE01000004.1 Protein Homology CDS 1225 1923 . - 0 ID=cds-TMR48831.1;Parent=gene-E3V84_00300;Dbxref=NCBI_GP:TMR48831.1;Name=TMR48831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499602.1;locus_tag=E3V84_00300;product=phage tail protein;protein_id=TMR48831.1;transl_table=11 SOQE01000004.1 Genbank gene 1923 6098 . - . ID=gene-E3V84_00305;Name=E3V84_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00305 SOQE01000004.1 Protein Homology CDS 1923 6098 . - 0 ID=cds-TMR48832.1;Parent=gene-E3V84_00305;Dbxref=NCBI_GP:TMR48832.1;Name=TMR48832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146321.1;locus_tag=E3V84_00305;product=phage tail tape measure protein;protein_id=TMR48832.1;transl_table=11 SOQE01000004.1 Genbank gene 6155 6385 . - . ID=gene-E3V84_00310;Name=E3V84_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00310 SOQE01000004.1 Protein Homology CDS 6155 6385 . - 0 ID=cds-TMR48833.1;Parent=gene-E3V84_00310;Dbxref=NCBI_GP:TMR48833.1;Name=TMR48833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087359.1;locus_tag=E3V84_00310;product=hypothetical protein;protein_id=TMR48833.1;transl_table=11 SOQE01000004.1 Genbank gene 6634 6927 . - . ID=gene-E3V84_00315;Name=E3V84_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00315 SOQE01000004.1 Protein Homology CDS 6634 6927 . - 0 ID=cds-TMR48834.1;Parent=gene-E3V84_00315;Dbxref=NCBI_GP:TMR48834.1;Name=TMR48834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151570.1;locus_tag=E3V84_00315;product=hypothetical protein;protein_id=TMR48834.1;transl_table=11 SOQE01000004.1 Genbank gene 6973 7569 . - . ID=gene-E3V84_00320;Name=E3V84_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00320 SOQE01000004.1 Protein Homology CDS 6973 7569 . - 0 ID=cds-TMR48835.1;Parent=gene-E3V84_00320;Dbxref=NCBI_GP:TMR48835.1;Name=TMR48835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216339.1;locus_tag=E3V84_00320;product=phage tail protein;protein_id=TMR48835.1;transl_table=11 SOQE01000004.1 Genbank gene 7586 7966 . - . ID=gene-E3V84_00325;Name=E3V84_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00325 SOQE01000004.1 Protein Homology CDS 7586 7966 . - 0 ID=cds-TMR48836.1;Parent=gene-E3V84_00325;Dbxref=NCBI_GP:TMR48836.1;Name=TMR48836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588569.1;locus_tag=E3V84_00325;product=hypothetical protein;protein_id=TMR48836.1;transl_table=11 SOQE01000004.1 Genbank gene 7966 8364 . - . ID=gene-E3V84_00330;Name=E3V84_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00330 SOQE01000004.1 Protein Homology CDS 7966 8364 . - 0 ID=cds-TMR48837.1;Parent=gene-E3V84_00330;Dbxref=NCBI_GP:TMR48837.1;Name=TMR48837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094502.1;locus_tag=E3V84_00330;product=hypothetical protein;protein_id=TMR48837.1;transl_table=11 SOQE01000004.1 Genbank gene 8357 8746 . - . ID=gene-E3V84_00335;Name=E3V84_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00335 SOQE01000004.1 Protein Homology CDS 8357 8746 . - 0 ID=cds-TMR48838.1;Parent=gene-E3V84_00335;Dbxref=NCBI_GP:TMR48838.1;Name=TMR48838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830391.1;locus_tag=E3V84_00335;product=phage head-tail adapter protein;protein_id=TMR48838.1;transl_table=11 SOQE01000004.1 Genbank gene 8733 8921 . - . ID=gene-E3V84_00340;Name=E3V84_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00340 SOQE01000004.1 Protein Homology CDS 8733 8921 . - 0 ID=cds-TMR48839.1;Parent=gene-E3V84_00340;Dbxref=NCBI_GP:TMR48839.1;Name=TMR48839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598695.1;locus_tag=E3V84_00340;product=hypothetical protein;protein_id=TMR48839.1;transl_table=11 SOQE01000004.1 Genbank gene 8914 9204 . - . ID=gene-E3V84_00345;Name=E3V84_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00345 SOQE01000004.1 Protein Homology CDS 8914 9204 . - 0 ID=cds-TMR48840.1;Parent=gene-E3V84_00345;Dbxref=NCBI_GP:TMR48840.1;Name=TMR48840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401889.1;locus_tag=E3V84_00345;product=phage gp6-like head-tail connector protein;protein_id=TMR48840.1;transl_table=11 SOQE01000004.1 Genbank gene 9218 10333 . - . ID=gene-E3V84_00350;Name=E3V84_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00350 SOQE01000004.1 Protein Homology CDS 9218 10333 . - 0 ID=cds-TMR48841.1;Parent=gene-E3V84_00350;Dbxref=NCBI_GP:TMR48841.1;Name=TMR48841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976934.1;locus_tag=E3V84_00350;product=phage major capsid protein;protein_id=TMR48841.1;transl_table=11 SOQE01000004.1 Genbank gene 10352 11074 . - . ID=gene-E3V84_00355;Name=E3V84_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00355 SOQE01000004.1 Protein Homology CDS 10352 11074 . - 0 ID=cds-TMR48842.1;Parent=gene-E3V84_00355;Dbxref=NCBI_GP:TMR48842.1;Name=TMR48842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152604.1;locus_tag=E3V84_00355;product=Clp protease ClpP;protein_id=TMR48842.1;transl_table=11 SOQE01000004.1 Genbank gene 11055 12203 . - . ID=gene-E3V84_00360;Name=E3V84_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00360 SOQE01000004.1 Protein Homology CDS 11055 12203 . - 0 ID=cds-TMR48843.1;Parent=gene-E3V84_00360;Dbxref=NCBI_GP:TMR48843.1;Name=TMR48843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506468.1;locus_tag=E3V84_00360;product=phage portal protein;protein_id=TMR48843.1;transl_table=11 SOQE01000004.1 Genbank gene 12259 13899 . - . ID=gene-E3V84_00365;Name=E3V84_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00365 SOQE01000004.1 Protein Homology CDS 12259 13899 . - 0 ID=cds-TMR48844.1;Parent=gene-E3V84_00365;Dbxref=NCBI_GP:TMR48844.1;Name=TMR48844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623346.1;locus_tag=E3V84_00365;product=terminase large subunit;protein_id=TMR48844.1;transl_table=11 SOQE01000004.1 Genbank gene 13896 14234 . - . ID=gene-E3V84_00370;Name=E3V84_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00370 SOQE01000004.1 Protein Homology CDS 13896 14234 . - 0 ID=cds-TMR48845.1;Parent=gene-E3V84_00370;Dbxref=NCBI_GP:TMR48845.1;Name=TMR48845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000393459.1;locus_tag=E3V84_00370;product=hypothetical protein;protein_id=TMR48845.1;transl_table=11 SOQE01000004.1 Genbank gene 14353 14649 . - . ID=gene-E3V84_00375;Name=E3V84_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00375 SOQE01000004.1 Protein Homology CDS 14353 14649 . - 0 ID=cds-TMR48846.1;Parent=gene-E3V84_00375;Dbxref=NCBI_GP:TMR48846.1;Name=TMR48846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573817.1;locus_tag=E3V84_00375;product=HNH endonuclease;protein_id=TMR48846.1;transl_table=11 SOQE01000004.1 Genbank gene 14863 15405 . - . ID=gene-E3V84_00380;Name=E3V84_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00380 SOQE01000004.1 Protein Homology CDS 14863 15405 . - 0 ID=cds-TMR48847.1;Parent=gene-E3V84_00380;Dbxref=NCBI_GP:TMR48847.1;Name=TMR48847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003029111.1;locus_tag=E3V84_00380;product=site-specific integrase;protein_id=TMR48847.1;transl_table=11 SOQE01000004.1 Genbank gene 15705 16133 . - . ID=gene-E3V84_00385;Name=E3V84_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00385 SOQE01000004.1 Protein Homology CDS 15705 16133 . - 0 ID=cds-TMR48848.1;Parent=gene-E3V84_00385;Dbxref=NCBI_GP:TMR48848.1;Name=TMR48848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=E3V84_00385;product=transcriptional regulator;protein_id=TMR48848.1;transl_table=11 SOQE01000004.1 Genbank gene 16204 16434 . - . ID=gene-E3V84_00390;Name=E3V84_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00390 SOQE01000004.1 Protein Homology CDS 16204 16434 . - 0 ID=cds-TMR48849.1;Parent=gene-E3V84_00390;Dbxref=NCBI_GP:TMR48849.1;Name=TMR48849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998323.1;locus_tag=E3V84_00390;product=XRE family transcriptional regulator;protein_id=TMR48849.1;transl_table=11 SOQE01000004.1 Genbank gene 16424 16603 . - . ID=gene-E3V84_00395;Name=E3V84_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00395 SOQE01000004.1 Protein Homology CDS 16424 16603 . - 0 ID=cds-TMR48850.1;Parent=gene-E3V84_00395;Dbxref=NCBI_GP:TMR48850.1;Name=TMR48850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007110.1;locus_tag=E3V84_00395;product=hypothetical protein;protein_id=TMR48850.1;transl_table=11 SOQE01000004.1 Genbank gene 16596 16768 . - . ID=gene-E3V84_00400;Name=E3V84_00400;end_range=16768,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00400;partial=true SOQE01000004.1 Protein Homology CDS 16596 16768 . - 2 ID=cds-TMR48851.1;Parent=gene-E3V84_00400;Dbxref=NCBI_GP:TMR48851.1;Name=TMR48851.1;end_range=16768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067623.1;locus_tag=E3V84_00400;partial=true;product=DUF3310 domain-containing protein;protein_id=TMR48851.1;transl_table=11 ##sequence-region SOQE01000040.1 1 26383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000040.1 Genbank region 1 26383 . + . ID=SOQE01000040.1:1..26383;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000040.1 Genbank gene 323 1216 . - . ID=gene-E3V84_04155;Name=E3V84_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04155 SOQE01000040.1 Protein Homology CDS 323 1216 . - 0 ID=cds-TMR47033.1;Parent=gene-E3V84_04155;Dbxref=NCBI_GP:TMR47033.1;Name=TMR47033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343891.1;locus_tag=E3V84_04155;product=XRE family transcriptional regulator;protein_id=TMR47033.1;transl_table=11 SOQE01000040.1 Genbank gene 1237 1431 . - . ID=gene-E3V84_04160;Name=E3V84_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04160 SOQE01000040.1 Protein Homology CDS 1237 1431 . - 0 ID=cds-TMR47034.1;Parent=gene-E3V84_04160;Dbxref=NCBI_GP:TMR47034.1;Name=TMR47034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757183.1;locus_tag=E3V84_04160;product=hypothetical protein;protein_id=TMR47034.1;transl_table=11 SOQE01000040.1 Genbank gene 1843 2049 . - . ID=gene-E3V84_04165;Name=E3V84_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04165 SOQE01000040.1 Protein Homology CDS 1843 2049 . - 0 ID=cds-TMR47035.1;Parent=gene-E3V84_04165;Dbxref=NCBI_GP:TMR47035.1;Name=TMR47035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445234.1;locus_tag=E3V84_04165;product=bacteriocin immunity protein;protein_id=TMR47035.1;transl_table=11 SOQE01000040.1 Genbank gene 2127 2306 . - . ID=gene-E3V84_04170;Name=E3V84_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04170 SOQE01000040.1 Protein Homology CDS 2127 2306 . - 0 ID=cds-TMR47036.1;Parent=gene-E3V84_04170;Dbxref=NCBI_GP:TMR47036.1;Name=TMR47036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846994.1;locus_tag=E3V84_04170;product=hypothetical protein;protein_id=TMR47036.1;transl_table=11 SOQE01000040.1 Genbank gene 2387 2602 . - . ID=gene-E3V84_04175;Name=E3V84_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04175 SOQE01000040.1 Protein Homology CDS 2387 2602 . - 0 ID=cds-TMR47037.1;Parent=gene-E3V84_04175;Dbxref=NCBI_GP:TMR47037.1;Name=TMR47037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445233.1;locus_tag=E3V84_04175;product=bacteriocin immunity protein;protein_id=TMR47037.1;transl_table=11 SOQE01000040.1 Genbank gene 2606 2773 . - . ID=gene-E3V84_04180;Name=E3V84_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04180 SOQE01000040.1 Protein Homology CDS 2606 2773 . - 0 ID=cds-TMR47038.1;Parent=gene-E3V84_04180;Dbxref=NCBI_GP:TMR47038.1;Name=TMR47038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284951.1;locus_tag=E3V84_04180;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR47038.1;transl_table=11 SOQE01000040.1 Genbank gene 2782 2982 . - . ID=gene-E3V84_04185;Name=E3V84_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04185 SOQE01000040.1 Protein Homology CDS 2782 2982 . - 0 ID=cds-TMR47039.1;Parent=gene-E3V84_04185;Dbxref=NCBI_GP:TMR47039.1;Name=TMR47039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478863.1;locus_tag=E3V84_04185;product=hypothetical protein;protein_id=TMR47039.1;transl_table=11 SOQE01000040.1 Genbank gene 3010 3204 . - . ID=gene-E3V84_04190;Name=E3V84_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04190 SOQE01000040.1 Protein Homology CDS 3010 3204 . - 0 ID=cds-TMR47040.1;Parent=gene-E3V84_04190;Dbxref=NCBI_GP:TMR47040.1;Name=TMR47040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180816.1;locus_tag=E3V84_04190;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR47040.1;transl_table=11 SOQE01000040.1 Genbank gene 3239 3385 . - . ID=gene-E3V84_04195;Name=E3V84_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04195 SOQE01000040.1 Protein Homology CDS 3239 3385 . - 0 ID=cds-TMR47063.1;Parent=gene-E3V84_04195;Dbxref=NCBI_GP:TMR47063.1;Name=TMR47063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=E3V84_04195;product=hypothetical protein;protein_id=TMR47063.1;transl_table=11 SOQE01000040.1 Genbank gene 3406 3534 . - . ID=gene-E3V84_04200;Name=E3V84_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04200 SOQE01000040.1 Protein Homology CDS 3406 3534 . - 0 ID=cds-TMR47041.1;Parent=gene-E3V84_04200;Dbxref=NCBI_GP:TMR47041.1;Name=TMR47041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=E3V84_04200;product=smi_0059.1 family bacteriocin-like peptide;protein_id=TMR47041.1;transl_table=11 SOQE01000040.1 Genbank gene 4027 5073 . - . ID=gene-E3V84_04205;Name=E3V84_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04205 SOQE01000040.1 Protein Homology CDS 4027 5073 . - 0 ID=cds-TMR47042.1;Parent=gene-E3V84_04205;Dbxref=NCBI_GP:TMR47042.1;Name=TMR47042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446391.1;locus_tag=E3V84_04205;product=hypothetical protein;protein_id=TMR47042.1;transl_table=11 SOQE01000040.1 Genbank pseudogene 5103 6442 . - . ID=gene-E3V84_04210;Name=E3V84_04210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04210;pseudo=true SOQE01000040.1 Protein Homology CDS 5103 6442 . - 0 ID=cds-E3V84_04210;Parent=gene-E3V84_04210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725077.1;locus_tag=E3V84_04210;product=N-acetylmuramoyl-L-alanine amidase family protein;pseudo=true;transl_table=11 SOQE01000040.1 Genbank gene 6489 7664 . - . ID=gene-E3V84_04215;Name=E3V84_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04215 SOQE01000040.1 Protein Homology CDS 6489 7664 . - 0 ID=cds-TMR47043.1;Parent=gene-E3V84_04215;Dbxref=NCBI_GP:TMR47043.1;Name=TMR47043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399520.1;locus_tag=E3V84_04215;product=choline-binding protein C;protein_id=TMR47043.1;transl_table=11 SOQE01000040.1 Genbank gene 7863 8450 . - . ID=gene-E3V84_04220;Name=E3V84_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04220 SOQE01000040.1 Protein Homology CDS 7863 8450 . - 0 ID=cds-TMR47044.1;Parent=gene-E3V84_04220;Dbxref=NCBI_GP:TMR47044.1;Name=TMR47044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446388.1;locus_tag=E3V84_04220;product=recombinase family protein;protein_id=TMR47044.1;transl_table=11 SOQE01000040.1 Genbank gene 9185 9415 . - . ID=gene-E3V84_04225;Name=blpU;gbkey=Gene;gene=blpU;gene_biotype=protein_coding;locus_tag=E3V84_04225 SOQE01000040.1 Protein Homology CDS 9185 9415 . - 0 ID=cds-TMR47045.1;Parent=gene-E3V84_04225;Dbxref=NCBI_GP:TMR47045.1;Name=TMR47045.1;gbkey=CDS;gene=blpU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357634.1;locus_tag=E3V84_04225;product=bacteriocin-like peptide BlpU;protein_id=TMR47045.1;transl_table=11 SOQE01000040.1 Genbank gene 9608 9808 . - . ID=gene-E3V84_04230;Name=E3V84_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04230 SOQE01000040.1 Protein Homology CDS 9608 9808 . - 0 ID=cds-TMR47046.1;Parent=gene-E3V84_04230;Dbxref=NCBI_GP:TMR47046.1;Name=TMR47046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055966.1;locus_tag=E3V84_04230;product=bacteriocin;protein_id=TMR47046.1;transl_table=11 SOQE01000040.1 Genbank gene 9838 10029 . - . ID=gene-E3V84_04235;Name=E3V84_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04235 SOQE01000040.1 Protein Homology CDS 9838 10029 . - 0 ID=cds-TMR47047.1;Parent=gene-E3V84_04235;Dbxref=NCBI_GP:TMR47047.1;Name=TMR47047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439599.1;locus_tag=E3V84_04235;product=hypothetical protein;protein_id=TMR47047.1;transl_table=11 SOQE01000040.1 Genbank gene 10049 10231 . - . ID=gene-E3V84_04240;Name=E3V84_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04240 SOQE01000040.1 Protein Homology CDS 10049 10231 . - 0 ID=cds-TMR47048.1;Parent=gene-E3V84_04240;Dbxref=NCBI_GP:TMR47048.1;Name=TMR47048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435077.1;locus_tag=E3V84_04240;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR47048.1;transl_table=11 SOQE01000040.1 Genbank gene 10342 10473 . - . ID=gene-E3V84_04245;Name=E3V84_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04245 SOQE01000040.1 Protein Homology CDS 10342 10473 . - 0 ID=cds-TMR47064.1;Parent=gene-E3V84_04245;Dbxref=NCBI_GP:TMR47064.1;Name=TMR47064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=E3V84_04245;product=hypothetical protein;protein_id=TMR47064.1;transl_table=11 SOQE01000040.1 Genbank gene 10494 10622 . - . ID=gene-E3V84_04250;Name=E3V84_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04250 SOQE01000040.1 Protein Homology CDS 10494 10622 . - 0 ID=cds-TMR47049.1;Parent=gene-E3V84_04250;Dbxref=NCBI_GP:TMR47049.1;Name=TMR47049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=E3V84_04250;product=smi_0059.1 family bacteriocin-like peptide;protein_id=TMR47049.1;transl_table=11 SOQE01000040.1 Genbank gene 11117 11848 . - . ID=gene-E3V84_04255;Name=E3V84_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04255 SOQE01000040.1 Protein Homology CDS 11117 11848 . - 0 ID=cds-TMR47050.1;Parent=gene-E3V84_04255;Dbxref=NCBI_GP:TMR47050.1;Name=TMR47050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445227.1;locus_tag=E3V84_04255;product=response regulator transcription factor;protein_id=TMR47050.1;transl_table=11 SOQE01000040.1 Genbank gene 11845 13191 . - . ID=gene-E3V84_04260;Name=E3V84_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04260 SOQE01000040.1 Protein Homology CDS 11845 13191 . - 0 ID=cds-TMR47051.1;Parent=gene-E3V84_04260;Dbxref=NCBI_GP:TMR47051.1;Name=TMR47051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445226.1;locus_tag=E3V84_04260;product=GHKL domain-containing protein;protein_id=TMR47051.1;transl_table=11 SOQE01000040.1 Genbank gene 13225 13371 . - . ID=gene-E3V84_04265;Name=E3V84_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04265 SOQE01000040.1 Protein Homology CDS 13225 13371 . - 0 ID=cds-TMR47052.1;Parent=gene-E3V84_04265;Dbxref=NCBI_GP:TMR47052.1;Name=TMR47052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445225.1;locus_tag=E3V84_04265;product=smi_0057.1 family bacteriocin-like peptide;protein_id=TMR47052.1;transl_table=11 SOQE01000040.1 Genbank gene 13524 14753 . - . ID=gene-E3V84_04270;Name=E3V84_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04270 SOQE01000040.1 Protein Homology CDS 13524 14753 . - 0 ID=cds-TMR47053.1;Parent=gene-E3V84_04270;Dbxref=NCBI_GP:TMR47053.1;Name=TMR47053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445224.1;locus_tag=E3V84_04270;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR47053.1;transl_table=11 SOQE01000040.1 Genbank gene 14866 15720 . - . ID=gene-E3V84_04275;Name=E3V84_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04275 SOQE01000040.1 Protein Homology CDS 14866 15720 . - 0 ID=cds-TMR47054.1;Parent=gene-E3V84_04275;Dbxref=NCBI_GP:TMR47054.1;Name=TMR47054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976808.1;locus_tag=E3V84_04275;product=hypothetical protein;protein_id=TMR47054.1;transl_table=11 SOQE01000040.1 Genbank gene 15867 15998 . - . ID=gene-E3V84_04280;Name=E3V84_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04280 SOQE01000040.1 Protein Homology CDS 15867 15998 . - 0 ID=cds-TMR47065.1;Parent=gene-E3V84_04280;Dbxref=NCBI_GP:TMR47065.1;Name=TMR47065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_04280;product=DNA alkylation repair protein;protein_id=TMR47065.1;transl_table=11 SOQE01000040.1 Genbank gene 16001 16234 . - . ID=gene-E3V84_04285;Name=E3V84_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04285 SOQE01000040.1 Protein Homology CDS 16001 16234 . - 0 ID=cds-TMR47055.1;Parent=gene-E3V84_04285;Dbxref=NCBI_GP:TMR47055.1;Name=TMR47055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445221.1;locus_tag=E3V84_04285;product=acyl carrier protein;protein_id=TMR47055.1;transl_table=11 SOQE01000040.1 Genbank gene 16240 17232 . - . ID=gene-E3V84_04290;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=E3V84_04290 SOQE01000040.1 Protein Homology CDS 16240 17232 . - 0 ID=cds-TMR47056.1;Parent=gene-E3V84_04290;Dbxref=NCBI_GP:TMR47056.1;Name=TMR47056.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445220.1;locus_tag=E3V84_04290;product=phosphate acyltransferase PlsX;protein_id=TMR47056.1;transl_table=11 SOQE01000040.1 Genbank gene 17229 17999 . - . ID=gene-E3V84_04295;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=E3V84_04295 SOQE01000040.1 Protein Homology CDS 17229 17999 . - 0 ID=cds-TMR47057.1;Parent=gene-E3V84_04295;Dbxref=NCBI_GP:TMR47057.1;Name=TMR47057.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357630.1;locus_tag=E3V84_04295;product=DNA repair protein RecO;protein_id=TMR47057.1;transl_table=11 SOQE01000040.1 Genbank gene 17996 19165 . - . ID=gene-E3V84_04300;Name=E3V84_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04300 SOQE01000040.1 Protein Homology CDS 17996 19165 . - 0 ID=cds-TMR47058.1;Parent=gene-E3V84_04300;Dbxref=NCBI_GP:TMR47058.1;Name=TMR47058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357629.1;locus_tag=E3V84_04300;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR47058.1;transl_table=11 SOQE01000040.1 Genbank gene 19314 20324 . + . ID=gene-E3V84_04305;Name=E3V84_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04305 SOQE01000040.1 Protein Homology CDS 19314 20324 . + 0 ID=cds-TMR47059.1;Parent=gene-E3V84_04305;Dbxref=NCBI_GP:TMR47059.1;Name=TMR47059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445217.1;locus_tag=E3V84_04305;product=YeiH family putative sulfate export transporter;protein_id=TMR47059.1;transl_table=11 SOQE01000040.1 Genbank pseudogene 20446 20511 . - . ID=gene-E3V84_04310;Name=E3V84_04310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04310;pseudo=true SOQE01000040.1 Protein Homology CDS 20446 20511 . - 0 ID=cds-E3V84_04310;Parent=gene-E3V84_04310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V84_04310;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000040.1 Genbank gene 20552 20989 . - . ID=gene-E3V84_04315;Name=E3V84_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04315 SOQE01000040.1 Protein Homology CDS 20552 20989 . - 0 ID=cds-TMR47060.1;Parent=gene-E3V84_04315;Dbxref=NCBI_GP:TMR47060.1;Name=TMR47060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357627.1;locus_tag=E3V84_04315;product=CoA-binding protein;protein_id=TMR47060.1;transl_table=11 SOQE01000040.1 Genbank gene 21073 23706 . - . ID=gene-E3V84_04320;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=E3V84_04320 SOQE01000040.1 Protein Homology CDS 21073 23706 . - 0 ID=cds-TMR47061.1;Parent=gene-E3V84_04320;Dbxref=NCBI_GP:TMR47061.1;Name=TMR47061.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445215.1;locus_tag=E3V84_04320;product=DNA polymerase I;protein_id=TMR47061.1;transl_table=11 SOQE01000040.1 Genbank pseudogene 23990 24151 . - . ID=gene-E3V84_04325;Name=E3V84_04325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04325;pseudo=true SOQE01000040.1 Protein Homology CDS 23990 24151 . - 0 ID=cds-E3V84_04325;Parent=gene-E3V84_04325;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844241.1;locus_tag=E3V84_04325;product=IS110 family transposase;pseudo=true;transl_table=11 SOQE01000040.1 Genbank pseudogene 24159 24413 . + . ID=gene-E3V84_04330;Name=E3V84_04330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04330;pseudo=true SOQE01000040.1 Protein Homology CDS 24159 24413 . + 0 ID=cds-E3V84_04330;Parent=gene-E3V84_04330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=E3V84_04330;product=IS66 family transposase;pseudo=true;transl_table=11 SOQE01000040.1 Genbank pseudogene 24484 24642 . + . ID=gene-E3V84_04335;Name=E3V84_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04335;pseudo=true SOQE01000040.1 Protein Homology CDS 24484 24642 . + 0 ID=cds-E3V84_04335;Parent=gene-E3V84_04335;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_04335;product=transposase domain-containing protein;pseudo=true;transl_table=11 SOQE01000040.1 Genbank gene 24865 25767 . - . ID=gene-E3V84_04340;Name=E3V84_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04340 SOQE01000040.1 Protein Homology CDS 24865 25767 . - 0 ID=cds-TMR47062.1;Parent=gene-E3V84_04340;Dbxref=NCBI_GP:TMR47062.1;Name=TMR47062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757033.1;locus_tag=E3V84_04340;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR47062.1;transl_table=11 SOQE01000040.1 Genbank pseudogene 25994 26246 . - . ID=gene-E3V84_04345;Name=E3V84_04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04345;pseudo=true SOQE01000040.1 Protein Homology CDS 25994 26246 . - 0 ID=cds-E3V84_04345;Parent=gene-E3V84_04345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839193.1;locus_tag=E3V84_04345;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000040.1 Genbank pseudogene 26247 26383 . - . ID=gene-E3V84_04350;Name=E3V84_04350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04350;pseudo=true SOQE01000040.1 Protein Homology CDS 26247 26383 . - 2 ID=cds-E3V84_04350;Parent=gene-E3V84_04350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_04350;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000041.1 1 7837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000041.1 Genbank region 1 7837 . + . ID=SOQE01000041.1:1..7837;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000041.1 Genbank pseudogene 1 797 . + . ID=gene-E3V84_04355;Name=E3V84_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04355;pseudo=true SOQE01000041.1 Protein Homology CDS 1 797 . + 0 ID=cds-E3V84_04355;Parent=gene-E3V84_04355;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001153874.1;locus_tag=E3V84_04355;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000041.1 Genbank gene 827 3259 . - . ID=gene-E3V84_04360;Name=E3V84_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04360 SOQE01000041.1 Protein Homology CDS 827 3259 . - 0 ID=cds-TMR46994.1;Parent=gene-E3V84_04360;Dbxref=NCBI_GP:TMR46994.1;Name=TMR46994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109706.1;locus_tag=E3V84_04360;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR46994.1;transl_table=11 SOQE01000041.1 Genbank gene 3261 3719 . - . ID=gene-E3V84_04365;Name=E3V84_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04365 SOQE01000041.1 Protein Homology CDS 3261 3719 . - 0 ID=cds-TMR46995.1;Parent=gene-E3V84_04365;Dbxref=NCBI_GP:TMR46995.1;Name=TMR46995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447142.1;locus_tag=E3V84_04365;product=CtsR family transcriptional regulator;protein_id=TMR46995.1;transl_table=11 SOQE01000041.1 Genbank gene 3842 4567 . - . ID=gene-E3V84_04370;Name=E3V84_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04370 SOQE01000041.1 Protein Homology CDS 3842 4567 . - 0 ID=cds-TMR46996.1;Parent=gene-E3V84_04370;Dbxref=NCBI_GP:TMR46996.1;Name=TMR46996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359593.1;locus_tag=E3V84_04370;product=ABC transporter ATP-binding protein;protein_id=TMR46996.1;transl_table=11 SOQE01000041.1 Genbank gene 4567 5574 . - . ID=gene-E3V84_04375;Name=E3V84_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04375 SOQE01000041.1 Protein Homology CDS 4567 5574 . - 0 ID=cds-TMR46997.1;Parent=gene-E3V84_04375;Dbxref=NCBI_GP:TMR46997.1;Name=TMR46997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359594.1;locus_tag=E3V84_04375;product=ABC transporter substrate-binding protein;protein_id=TMR46997.1;transl_table=11 SOQE01000041.1 Genbank gene 5612 6373 . - . ID=gene-E3V84_04380;Name=E3V84_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04380 SOQE01000041.1 Protein Homology CDS 5612 6373 . - 0 ID=cds-TMR46998.1;Parent=gene-E3V84_04380;Dbxref=NCBI_GP:TMR46998.1;Name=TMR46998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447145.1;locus_tag=E3V84_04380;product=ABC transporter permease;protein_id=TMR46998.1;transl_table=11 SOQE01000041.1 Genbank gene 6333 6623 . - . ID=gene-E3V84_04385;Name=E3V84_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04385 SOQE01000041.1 Protein Homology CDS 6333 6623 . - 0 ID=cds-TMR46999.1;Parent=gene-E3V84_04385;Dbxref=NCBI_GP:TMR46999.1;Name=TMR46999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359596.1;locus_tag=E3V84_04385;product=hypothetical protein;protein_id=TMR46999.1;transl_table=11 SOQE01000041.1 cmsearch riboswitch 6693 6795 . - . ID=id-SOQE01000041.1:6693..6795;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000041.1 Genbank pseudogene 6907 7823 . - . ID=gene-E3V84_04390;Name=E3V84_04390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04390;pseudo=true SOQE01000041.1 Protein Homology CDS 6907 7823 . - 0 ID=cds-E3V84_04390;Parent=gene-E3V84_04390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398343.1;locus_tag=E3V84_04390;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region SOQE01000042.1 1 3854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000042.1 Genbank region 1 3854 . + . ID=SOQE01000042.1:1..3854;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000042.1 Genbank gene 1 519 . + . ID=gene-E3V84_04395;Name=E3V84_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04395;partial=true;start_range=.,1 SOQE01000042.1 Protein Homology CDS 1 519 . + 0 ID=cds-TMR46985.1;Parent=gene-E3V84_04395;Dbxref=NCBI_GP:TMR46985.1;Name=TMR46985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_04395;partial=true;product=transposase;protein_id=TMR46985.1;start_range=.,1;transl_table=11 SOQE01000042.1 Genbank gene 828 1742 . - . ID=gene-E3V84_04400;Name=E3V84_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04400 SOQE01000042.1 Protein Homology CDS 828 1742 . - 0 ID=cds-TMR46988.1;Parent=gene-E3V84_04400;Dbxref=NCBI_GP:TMR46988.1;Name=TMR46988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445542.1;locus_tag=E3V84_04400;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR46988.1;transl_table=11 SOQE01000042.1 Genbank gene 1923 3161 . - . ID=gene-E3V84_04405;Name=E3V84_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04405 SOQE01000042.1 Protein Homology CDS 1923 3161 . - 0 ID=cds-TMR46986.1;Parent=gene-E3V84_04405;Dbxref=NCBI_GP:TMR46986.1;Name=TMR46986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722392.1;locus_tag=E3V84_04405;product=peptidase C14;protein_id=TMR46986.1;transl_table=11 SOQE01000042.1 Genbank gene 3254 3854 . + . ID=gene-E3V84_04410;Name=E3V84_04410;end_range=3854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04410;partial=true SOQE01000042.1 Protein Homology CDS 3254 3854 . + 0 ID=cds-TMR46987.1;Parent=gene-E3V84_04410;Dbxref=NCBI_GP:TMR46987.1;Name=TMR46987.1;end_range=3854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=E3V84_04410;partial=true;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR46987.1;transl_table=11 ##sequence-region SOQE01000043.1 1 2757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000043.1 Genbank region 1 2757 . + . ID=SOQE01000043.1:1..2757;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000043.1 Genbank gene 1 120 . - . ID=gene-E3V84_04415;Name=E3V84_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04415;partial=true;start_range=.,1 SOQE01000043.1 Protein Homology CDS 1 120 . - 0 ID=cds-TMR46978.1;Parent=gene-E3V84_04415;Dbxref=NCBI_GP:TMR46978.1;Name=TMR46978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=E3V84_04415;partial=true;product=growth inhibitor PemK;protein_id=TMR46978.1;start_range=.,1;transl_table=11 SOQE01000043.1 Genbank gene 121 876 . - . ID=gene-E3V84_04420;Name=E3V84_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04420 SOQE01000043.1 Protein Homology CDS 121 876 . - 0 ID=cds-TMR46979.1;Parent=gene-E3V84_04420;Dbxref=NCBI_GP:TMR46979.1;Name=TMR46979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377627.1;locus_tag=E3V84_04420;product=helix-turn-helix domain-containing protein;protein_id=TMR46979.1;transl_table=11 SOQE01000043.1 Genbank gene 1045 1320 . + . ID=gene-E3V84_04425;Name=E3V84_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04425 SOQE01000043.1 Protein Homology CDS 1045 1320 . + 0 ID=cds-TMR46980.1;Parent=gene-E3V84_04425;Dbxref=NCBI_GP:TMR46980.1;Name=TMR46980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973618.1;locus_tag=E3V84_04425;product=hypothetical protein;protein_id=TMR46980.1;transl_table=11 SOQE01000043.1 Genbank gene 1393 1536 . + . ID=gene-E3V84_04430;Name=E3V84_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04430 SOQE01000043.1 Protein Homology CDS 1393 1536 . + 0 ID=cds-TMR46981.1;Parent=gene-E3V84_04430;Dbxref=NCBI_GP:TMR46981.1;Name=TMR46981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446472.1;locus_tag=E3V84_04430;product=hypothetical protein;protein_id=TMR46981.1;transl_table=11 SOQE01000043.1 Genbank gene 1834 2544 . - . ID=gene-E3V84_04435;Name=E3V84_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04435 SOQE01000043.1 Protein Homology CDS 1834 2544 . - 0 ID=cds-TMR46982.1;Parent=gene-E3V84_04435;Dbxref=NCBI_GP:TMR46982.1;Name=TMR46982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006951.1;locus_tag=E3V84_04435;product=DUF4145 domain-containing protein;protein_id=TMR46982.1;transl_table=11 ##sequence-region SOQE01000044.1 1 60147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000044.1 Genbank region 1 60147 . + . ID=SOQE01000044.1:1..60147;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000044.1 Genbank gene 637 1764 . + . ID=gene-E3V84_04440;Name=E3V84_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04440 SOQE01000044.1 Protein Homology CDS 637 1764 . + 0 ID=cds-TMR46900.1;Parent=gene-E3V84_04440;Dbxref=NCBI_GP:TMR46900.1;Name=TMR46900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266845.1;locus_tag=E3V84_04440;product=site-specific integrase;protein_id=TMR46900.1;transl_table=11 SOQE01000044.1 Genbank gene 1852 2763 . - . ID=gene-E3V84_04445;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=E3V84_04445 SOQE01000044.1 Protein Homology CDS 1852 2763 . - 0 ID=cds-TMR46901.1;Parent=gene-E3V84_04445;Dbxref=NCBI_GP:TMR46901.1;Name=TMR46901.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359015.1;locus_tag=E3V84_04445;product=DNA-binding protein WhiA;protein_id=TMR46901.1;transl_table=11 SOQE01000044.1 Genbank gene 2760 3737 . - . ID=gene-E3V84_04450;Name=E3V84_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04450 SOQE01000044.1 Protein Homology CDS 2760 3737 . - 0 ID=cds-TMR46902.1;Parent=gene-E3V84_04450;Dbxref=NCBI_GP:TMR46902.1;Name=TMR46902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446657.1;locus_tag=E3V84_04450;product=YvcK family protein;protein_id=TMR46902.1;transl_table=11 SOQE01000044.1 Genbank gene 3734 4624 . - . ID=gene-E3V84_04455;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=E3V84_04455 SOQE01000044.1 Protein Homology CDS 3734 4624 . - 0 ID=cds-TMR46903.1;Parent=gene-E3V84_04455;Dbxref=NCBI_GP:TMR46903.1;Name=TMR46903.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446658.1;locus_tag=E3V84_04455;product=RNase adapter RapZ;protein_id=TMR46903.1;transl_table=11 SOQE01000044.1 Genbank gene 4676 5056 . - . ID=gene-E3V84_04460;Name=E3V84_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04460 SOQE01000044.1 Protein Homology CDS 4676 5056 . - 0 ID=cds-TMR46904.1;Parent=gene-E3V84_04460;Dbxref=NCBI_GP:TMR46904.1;Name=TMR46904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359018.1;locus_tag=E3V84_04460;product=RidA family protein;protein_id=TMR46904.1;transl_table=11 SOQE01000044.1 Genbank gene 5067 5654 . - . ID=gene-E3V84_04465;Name=E3V84_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04465 SOQE01000044.1 Protein Homology CDS 5067 5654 . - 0 ID=cds-TMR46905.1;Parent=gene-E3V84_04465;Dbxref=NCBI_GP:TMR46905.1;Name=TMR46905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035057.1;locus_tag=E3V84_04465;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=TMR46905.1;transl_table=11 SOQE01000044.1 Genbank gene 5663 6895 . - . ID=gene-E3V84_04470;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=E3V84_04470 SOQE01000044.1 Protein Homology CDS 5663 6895 . - 0 ID=cds-TMR46906.1;Parent=gene-E3V84_04470;Dbxref=NCBI_GP:TMR46906.1;Name=TMR46906.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359020.1;locus_tag=E3V84_04470;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TMR46906.1;transl_table=11 SOQE01000044.1 Genbank gene 6927 7097 . - . ID=gene-E3V84_04475;Name=E3V84_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04475 SOQE01000044.1 Protein Homology CDS 6927 7097 . - 0 ID=cds-TMR46907.1;Parent=gene-E3V84_04475;Dbxref=NCBI_GP:TMR46907.1;Name=TMR46907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359021.1;locus_tag=E3V84_04475;product=hypothetical protein;protein_id=TMR46907.1;transl_table=11 SOQE01000044.1 Genbank gene 7097 7603 . - . ID=gene-E3V84_04480;Name=E3V84_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04480 SOQE01000044.1 Protein Homology CDS 7097 7603 . - 0 ID=cds-TMR46908.1;Parent=gene-E3V84_04480;Dbxref=NCBI_GP:TMR46908.1;Name=TMR46908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359022.1;locus_tag=E3V84_04480;product=dihydrofolate reductase;protein_id=TMR46908.1;transl_table=11 SOQE01000044.1 Genbank gene 7733 8251 . - . ID=gene-E3V84_04485;Name=E3V84_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04485 SOQE01000044.1 Protein Homology CDS 7733 8251 . - 0 ID=cds-TMR46909.1;Parent=gene-E3V84_04485;Dbxref=NCBI_GP:TMR46909.1;Name=TMR46909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229877.1;locus_tag=E3V84_04485;product=DNA starvation/stationary phase protection protein;protein_id=TMR46909.1;transl_table=11 SOQE01000044.1 Genbank gene 8902 10392 . - . ID=gene-E3V84_04490;Name=lytC;gbkey=Gene;gene=lytC;gene_biotype=protein_coding;locus_tag=E3V84_04490 SOQE01000044.1 Protein Homology CDS 8902 10392 . - 0 ID=cds-TMR46910.1;Parent=gene-E3V84_04490;Dbxref=NCBI_GP:TMR46910.1;Name=TMR46910.1;gbkey=CDS;gene=lytC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359024.1;locus_tag=E3V84_04490;product=choline binding-anchored murein hydrolase LytC;protein_id=TMR46910.1;transl_table=11 SOQE01000044.1 Genbank gene 10430 11188 . - . ID=gene-E3V84_04495;Name=E3V84_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04495 SOQE01000044.1 Protein Homology CDS 10430 11188 . - 0 ID=cds-TMR46911.1;Parent=gene-E3V84_04495;Dbxref=NCBI_GP:TMR46911.1;Name=TMR46911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446666.1;locus_tag=E3V84_04495;product=triose-phosphate isomerase;protein_id=TMR46911.1;transl_table=11 SOQE01000044.1 Genbank gene 11286 11963 . - . ID=gene-E3V84_04500;Name=E3V84_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04500 SOQE01000044.1 Protein Homology CDS 11286 11963 . - 0 ID=cds-TMR46912.1;Parent=gene-E3V84_04500;Dbxref=NCBI_GP:TMR46912.1;Name=TMR46912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359026.1;locus_tag=E3V84_04500;product=DnaD domain protein;protein_id=TMR46912.1;transl_table=11 SOQE01000044.1 Genbank gene 11972 12916 . - . ID=gene-E3V84_04505;Name=E3V84_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04505 SOQE01000044.1 Protein Homology CDS 11972 12916 . - 0 ID=cds-TMR46913.1;Parent=gene-E3V84_04505;Dbxref=NCBI_GP:TMR46913.1;Name=TMR46913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446668.1;locus_tag=E3V84_04505;product=homoserine O-succinyltransferase;protein_id=TMR46913.1;transl_table=11 SOQE01000044.1 Genbank gene 12900 13091 . - . ID=gene-E3V84_04510;Name=E3V84_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04510 SOQE01000044.1 Protein Homology CDS 12900 13091 . - 0 ID=cds-TMR46952.1;Parent=gene-E3V84_04510;Dbxref=NCBI_GP:TMR46952.1;Name=TMR46952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=E3V84_04510;product=hypothetical protein;protein_id=TMR46952.1;transl_table=11 SOQE01000044.1 Genbank gene 13469 13981 . - . ID=gene-E3V84_04515;Name=E3V84_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04515 SOQE01000044.1 Protein Homology CDS 13469 13981 . - 0 ID=cds-TMR46914.1;Parent=gene-E3V84_04515;Dbxref=NCBI_GP:TMR46914.1;Name=TMR46914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=E3V84_04515;product=adenine phosphoribosyltransferase;protein_id=TMR46914.1;transl_table=11 SOQE01000044.1 Genbank gene 14253 15383 . - . ID=gene-E3V84_04520;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=E3V84_04520 SOQE01000044.1 Protein Homology CDS 14253 15383 . - 0 ID=cds-TMR46915.1;Parent=gene-E3V84_04520;Dbxref=NCBI_GP:TMR46915.1;Name=TMR46915.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359030.1;locus_tag=E3V84_04520;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=TMR46915.1;transl_table=11 SOQE01000044.1 Genbank gene 15664 15749 . - . ID=gene-E3V84_04525;Name=E3V84_04525;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_04525 SOQE01000044.1 tRNAscan-SE tRNA 15664 15749 . - . ID=rna-E3V84_04525;Parent=gene-E3V84_04525;anticodon=(pos:complement(15713..15715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_04525;product=tRNA-Leu SOQE01000044.1 tRNAscan-SE exon 15664 15749 . - . ID=exon-E3V84_04525-1;Parent=rna-E3V84_04525;anticodon=(pos:complement(15713..15715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_04525;product=tRNA-Leu SOQE01000044.1 Genbank gene 15830 16405 . - . ID=gene-E3V84_04530;Name=E3V84_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04530 SOQE01000044.1 Protein Homology CDS 15830 16405 . - 0 ID=cds-TMR46916.1;Parent=gene-E3V84_04530;Dbxref=NCBI_GP:TMR46916.1;Name=TMR46916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359031.1;locus_tag=E3V84_04530;product=cysteine hydrolase;protein_id=TMR46916.1;transl_table=11 SOQE01000044.1 Genbank gene 16405 17193 . - . ID=gene-E3V84_04535;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=E3V84_04535 SOQE01000044.1 Protein Homology CDS 16405 17193 . - 0 ID=cds-TMR46917.1;Parent=gene-E3V84_04535;Dbxref=NCBI_GP:TMR46917.1;Name=TMR46917.1;gbkey=CDS;gene=codY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359032.1;locus_tag=E3V84_04535;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=TMR46917.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 17333 17473 . + . ID=gene-E3V84_04540;Name=E3V84_04540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04540;pseudo=true SOQE01000044.1 Protein Homology CDS 17333 17473 . + 0 ID=cds-E3V84_04540;Parent=gene-E3V84_04540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810071.1;locus_tag=E3V84_04540;product=pyridine nucleotide-disulfide oxidoreductase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 17448 19028 . - . ID=gene-E3V84_04545;Name=E3V84_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04545 SOQE01000044.1 Protein Homology CDS 17448 19028 . - 0 ID=cds-TMR46918.1;Parent=gene-E3V84_04545;Dbxref=NCBI_GP:TMR46918.1;Name=TMR46918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445802.1;locus_tag=E3V84_04545;product=DEAD/DEAH box helicase;protein_id=TMR46918.1;transl_table=11 SOQE01000044.1 Genbank gene 19226 20452 . - . ID=gene-E3V84_04550;Name=E3V84_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04550 SOQE01000044.1 Protein Homology CDS 19226 20452 . - 0 ID=cds-TMR46919.1;Parent=gene-E3V84_04550;Dbxref=NCBI_GP:TMR46919.1;Name=TMR46919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359034.1;locus_tag=E3V84_04550;product=MFS transporter;protein_id=TMR46919.1;transl_table=11 SOQE01000044.1 Genbank gene 20645 21961 . + . ID=gene-E3V84_04555;Name=E3V84_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04555 SOQE01000044.1 Protein Homology CDS 20645 21961 . + 0 ID=cds-TMR46920.1;Parent=gene-E3V84_04555;Dbxref=NCBI_GP:TMR46920.1;Name=TMR46920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359035.1;locus_tag=E3V84_04555;product=FAD-containing oxidoreductase;protein_id=TMR46920.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 22015 22092 . + . ID=gene-E3V84_04560;Name=E3V84_04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04560;pseudo=true SOQE01000044.1 Protein Homology CDS 22015 22092 . + 0 ID=cds-E3V84_04560;Parent=gene-E3V84_04560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_04560;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 22166 23509 . + . ID=gene-E3V84_04565;Name=E3V84_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04565 SOQE01000044.1 Protein Homology CDS 22166 23509 . + 0 ID=cds-TMR46921.1;Parent=gene-E3V84_04565;Dbxref=NCBI_GP:TMR46921.1;Name=TMR46921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359036.1;locus_tag=E3V84_04565;product=Mur ligase family protein;protein_id=TMR46921.1;transl_table=11 SOQE01000044.1 Genbank gene 23509 24291 . + . ID=gene-E3V84_04570;Name=E3V84_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04570 SOQE01000044.1 Protein Homology CDS 23509 24291 . + 0 ID=cds-TMR46922.1;Parent=gene-E3V84_04570;Dbxref=NCBI_GP:TMR46922.1;Name=TMR46922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359037.1;locus_tag=E3V84_04570;product=glutamine amidotransferase;protein_id=TMR46922.1;transl_table=11 SOQE01000044.1 Genbank gene 24418 25500 . + . ID=gene-E3V84_04575;Name=E3V84_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04575 SOQE01000044.1 Protein Homology CDS 24418 25500 . + 0 ID=cds-TMR46923.1;Parent=gene-E3V84_04575;Dbxref=NCBI_GP:TMR46923.1;Name=TMR46923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445796.1;locus_tag=E3V84_04575;product=aminopeptidase P family protein;protein_id=TMR46923.1;transl_table=11 SOQE01000044.1 Genbank gene 25519 26787 . - . ID=gene-E3V84_04580;Name=E3V84_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04580 SOQE01000044.1 Protein Homology CDS 25519 26787 . - 0 ID=cds-TMR46924.1;Parent=gene-E3V84_04580;Dbxref=NCBI_GP:TMR46924.1;Name=TMR46924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961371.1;locus_tag=E3V84_04580;product=GHKL domain-containing protein;protein_id=TMR46924.1;transl_table=11 SOQE01000044.1 Genbank gene 26787 27494 . - . ID=gene-E3V84_04585;Name=E3V84_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04585 SOQE01000044.1 Protein Homology CDS 26787 27494 . - 0 ID=cds-TMR46925.1;Parent=gene-E3V84_04585;Dbxref=NCBI_GP:TMR46925.1;Name=TMR46925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950056.1;locus_tag=E3V84_04585;product=response regulator transcription factor;protein_id=TMR46925.1;transl_table=11 SOQE01000044.1 Genbank gene 27935 29068 . + . ID=gene-E3V84_04590;Name=E3V84_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04590 SOQE01000044.1 Protein Homology CDS 27935 29068 . + 0 ID=cds-TMR46926.1;Parent=gene-E3V84_04590;Dbxref=NCBI_GP:TMR46926.1;Name=TMR46926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014727367.1;locus_tag=E3V84_04590;product=ThiF family adenylyltransferase;protein_id=TMR46926.1;transl_table=11 SOQE01000044.1 Genbank gene 29065 29976 . + . ID=gene-E3V84_04595;Name=E3V84_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04595 SOQE01000044.1 Protein Homology CDS 29065 29976 . + 0 ID=cds-TMR46927.1;Parent=gene-E3V84_04595;Dbxref=NCBI_GP:TMR46927.1;Name=TMR46927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197224.1;locus_tag=E3V84_04595;product=ABC transporter ATP-binding protein;protein_id=TMR46927.1;transl_table=11 SOQE01000044.1 Genbank gene 29978 30700 . + . ID=gene-E3V84_04600;Name=E3V84_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04600 SOQE01000044.1 Protein Homology CDS 29978 30700 . + 0 ID=cds-TMR46928.1;Parent=gene-E3V84_04600;Dbxref=NCBI_GP:TMR46928.1;Name=TMR46928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017479.1;locus_tag=E3V84_04600;product=ABC transporter permease;protein_id=TMR46928.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 30749 31223 . + . ID=gene-E3V84_04605;Name=E3V84_04605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04605;pseudo=true SOQE01000044.1 Protein Homology CDS 30749 31223 . + 0 ID=cds-E3V84_04605;Parent=gene-E3V84_04605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155488.1;locus_tag=E3V84_04605;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 31371 31832 . - . ID=gene-E3V84_04610;Name=E3V84_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04610 SOQE01000044.1 Protein Homology CDS 31371 31832 . - 0 ID=cds-TMR46929.1;Parent=gene-E3V84_04610;Dbxref=NCBI_GP:TMR46929.1;Name=TMR46929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445795.1;locus_tag=E3V84_04610;product=ECF transporter S component;protein_id=TMR46929.1;transl_table=11 SOQE01000044.1 Genbank gene 31810 32583 . - . ID=gene-E3V84_04615;Name=E3V84_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04615 SOQE01000044.1 Protein Homology CDS 31810 32583 . - 0 ID=cds-TMR46930.1;Parent=gene-E3V84_04615;Dbxref=NCBI_GP:TMR46930.1;Name=TMR46930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445794.1;locus_tag=E3V84_04615;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TMR46930.1;transl_table=11 SOQE01000044.1 Genbank gene 32573 33322 . - . ID=gene-E3V84_04620;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=E3V84_04620 SOQE01000044.1 Protein Homology CDS 32573 33322 . - 0 ID=cds-TMR46931.1;Parent=gene-E3V84_04620;Dbxref=NCBI_GP:TMR46931.1;Name=TMR46931.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359044.1;locus_tag=E3V84_04620;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=TMR46931.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 33502 33669 . + . ID=gene-E3V84_04625;Name=E3V84_04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04625;pseudo=true SOQE01000044.1 Protein Homology CDS 33502 33669 . + 0 ID=cds-E3V84_04625;Parent=gene-E3V84_04625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809593.1;locus_tag=E3V84_04625;product=cytidylate kinase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 33641 34792 . - . ID=gene-E3V84_04630;Name=E3V84_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04630 SOQE01000044.1 Protein Homology CDS 33641 34792 . - 0 ID=cds-TMR46932.1;Parent=gene-E3V84_04630;Dbxref=NCBI_GP:TMR46932.1;Name=TMR46932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359046.1;locus_tag=E3V84_04630;product=MFS transporter;protein_id=TMR46932.1;transl_table=11 SOQE01000044.1 Genbank gene 34926 35117 . + . ID=gene-E3V84_04635;Name=E3V84_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04635 SOQE01000044.1 Protein Homology CDS 34926 35117 . + 0 ID=cds-TMR46933.1;Parent=gene-E3V84_04635;Dbxref=NCBI_GP:TMR46933.1;Name=TMR46933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_04635;product=hypothetical protein;protein_id=TMR46933.1;transl_table=11 SOQE01000044.1 Genbank gene 35114 35743 . - . ID=gene-E3V84_04640;Name=E3V84_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04640 SOQE01000044.1 Protein Homology CDS 35114 35743 . - 0 ID=cds-TMR46934.1;Parent=gene-E3V84_04640;Dbxref=NCBI_GP:TMR46934.1;Name=TMR46934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033949.1;locus_tag=E3V84_04640;product=hypothetical protein;protein_id=TMR46934.1;transl_table=11 SOQE01000044.1 Genbank gene 35746 36084 . - . ID=gene-E3V84_04645;Name=E3V84_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04645 SOQE01000044.1 Protein Homology CDS 35746 36084 . - 0 ID=cds-TMR46935.1;Parent=gene-E3V84_04645;Dbxref=NCBI_GP:TMR46935.1;Name=TMR46935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359048.1;locus_tag=E3V84_04645;product=alkylphosphonate utilization protein;protein_id=TMR46935.1;transl_table=11 SOQE01000044.1 Genbank gene 36215 36886 . - . ID=gene-E3V84_04650;Name=E3V84_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04650 SOQE01000044.1 Protein Homology CDS 36215 36886 . - 0 ID=cds-TMR46936.1;Parent=gene-E3V84_04650;Dbxref=NCBI_GP:TMR46936.1;Name=TMR46936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359049.1;locus_tag=E3V84_04650;product=(d)CMP kinase;protein_id=TMR46936.1;transl_table=11 SOQE01000044.1 Genbank gene 36895 37371 . - . ID=gene-E3V84_04655;Name=E3V84_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04655 SOQE01000044.1 Protein Homology CDS 36895 37371 . - 0 ID=cds-TMR46937.1;Parent=gene-E3V84_04655;Dbxref=NCBI_GP:TMR46937.1;Name=TMR46937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359050.1;locus_tag=E3V84_04655;product=LysM domain-containing protein;protein_id=TMR46937.1;transl_table=11 SOQE01000044.1 Genbank gene 37351 37626 . + . ID=gene-E3V84_04660;Name=E3V84_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04660 SOQE01000044.1 Protein Homology CDS 37351 37626 . + 0 ID=cds-TMR46938.1;Parent=gene-E3V84_04660;Dbxref=NCBI_GP:TMR46938.1;Name=TMR46938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359051.1;locus_tag=E3V84_04660;product=ferredoxin;protein_id=TMR46938.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 37690 37791 . - . ID=gene-E3V84_04665;Name=E3V84_04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04665;pseudo=true SOQE01000044.1 Protein Homology CDS 37690 37791 . - 0 ID=cds-E3V84_04665;Parent=gene-E3V84_04665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445786.1;locus_tag=E3V84_04665;product=group 2 glycosyl transferase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 37830 38474 . - . ID=gene-E3V84_04670;Name=E3V84_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04670 SOQE01000044.1 Protein Homology CDS 37830 38474 . - 0 ID=cds-TMR46939.1;Parent=gene-E3V84_04670;Dbxref=NCBI_GP:TMR46939.1;Name=TMR46939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949237.1;locus_tag=E3V84_04670;product=hypothetical protein;protein_id=TMR46939.1;transl_table=11 SOQE01000044.1 Genbank gene 38649 39584 . - . ID=gene-E3V84_04675;Name=E3V84_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04675 SOQE01000044.1 Protein Homology CDS 38649 39584 . - 0 ID=cds-TMR46940.1;Parent=gene-E3V84_04675;Dbxref=NCBI_GP:TMR46940.1;Name=TMR46940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445786.1;locus_tag=E3V84_04675;product=glycosyltransferase;protein_id=TMR46940.1;transl_table=11 SOQE01000044.1 Genbank gene 39586 40605 . - . ID=gene-E3V84_04680;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=E3V84_04680 SOQE01000044.1 Protein Homology CDS 39586 40605 . - 0 ID=cds-TMR46941.1;Parent=gene-E3V84_04680;Dbxref=NCBI_GP:TMR46941.1;Name=TMR46941.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445785.1;locus_tag=E3V84_04680;product=UDP-glucose 4-epimerase GalE;protein_id=TMR46941.1;transl_table=11 SOQE01000044.1 Genbank gene 40584 41033 . - . ID=gene-E3V84_04685;Name=E3V84_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04685 SOQE01000044.1 Protein Homology CDS 40584 41033 . - 0 ID=cds-TMR46942.1;Parent=gene-E3V84_04685;Dbxref=NCBI_GP:TMR46942.1;Name=TMR46942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1%2CRefSeq:WP_009014301.1;locus_tag=E3V84_04685;product=hypothetical protein;protein_id=TMR46942.1;transl_table=11 SOQE01000044.1 Genbank gene 41040 42152 . - . ID=gene-E3V84_04690;Name=E3V84_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04690 SOQE01000044.1 Protein Homology CDS 41040 42152 . - 0 ID=cds-TMR46943.1;Parent=gene-E3V84_04690;Dbxref=NCBI_GP:TMR46943.1;Name=TMR46943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359054.1;locus_tag=E3V84_04690;product=FAD-binding oxidoreductase;protein_id=TMR46943.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 42360 42997 . - . ID=gene-E3V84_04695;Name=E3V84_04695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04695;pseudo=true SOQE01000044.1 Protein Homology CDS 42360 42997 . - 0 ID=cds-E3V84_04695;Parent=gene-E3V84_04695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284783.1;locus_tag=E3V84_04695;product=Abi family protein;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 43953 50579 . - . ID=gene-E3V84_04700;Name=E3V84_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04700 SOQE01000044.1 Protein Homology CDS 43953 50579 . - 0 ID=cds-TMR46944.1;Parent=gene-E3V84_04700;Dbxref=NCBI_GP:TMR46944.1;Name=TMR46944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=E3V84_04700;product=YSIRK-type signal peptide-containing protein;protein_id=TMR46944.1;transl_table=11 SOQE01000044.1 Genbank gene 50996 51793 . - . ID=gene-E3V84_04705;Name=E3V84_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04705 SOQE01000044.1 Protein Homology CDS 50996 51793 . - 0 ID=cds-TMR46945.1;Parent=gene-E3V84_04705;Dbxref=NCBI_GP:TMR46945.1;Name=TMR46945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445782.1;locus_tag=E3V84_04705;product=Nif3-like dinuclear metal center hexameric protein;protein_id=TMR46945.1;transl_table=11 SOQE01000044.1 Genbank gene 51780 52457 . - . ID=gene-E3V84_04710;Name=E3V84_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04710 SOQE01000044.1 Protein Homology CDS 51780 52457 . - 0 ID=cds-TMR46946.1;Parent=gene-E3V84_04710;Dbxref=NCBI_GP:TMR46946.1;Name=TMR46946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445781.1;locus_tag=E3V84_04710;product=tRNA (adenine-N(1))-methyltransferase;protein_id=TMR46946.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 52804 54042 . + . ID=gene-E3V84_04715;Name=E3V84_04715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04715;pseudo=true SOQE01000044.1 Protein Homology CDS 52804 54042 . + 0 ID=cds-E3V84_04715;Parent=gene-E3V84_04715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397624.1;locus_tag=E3V84_04715;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 54255 57377 . + . ID=gene-E3V84_04720;Name=E3V84_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04720 SOQE01000044.1 Protein Homology CDS 54255 57377 . + 0 ID=cds-TMR46947.1;Parent=gene-E3V84_04720;Dbxref=NCBI_GP:TMR46947.1;Name=TMR46947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828348.1;locus_tag=E3V84_04720;product=helicase;protein_id=TMR46947.1;transl_table=11 SOQE01000044.1 Genbank gene 57514 57699 . + . ID=gene-E3V84_04725;Name=E3V84_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04725 SOQE01000044.1 Protein Homology CDS 57514 57699 . + 0 ID=cds-TMR46948.1;Parent=gene-E3V84_04725;Dbxref=NCBI_GP:TMR46948.1;Name=TMR46948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V84_04725;product=hypothetical protein;protein_id=TMR46948.1;transl_table=11 SOQE01000044.1 Genbank gene 57680 58030 . + . ID=gene-E3V84_04730;Name=E3V84_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04730 SOQE01000044.1 Protein Homology CDS 57680 58030 . + 0 ID=cds-TMR46949.1;Parent=gene-E3V84_04730;Dbxref=NCBI_GP:TMR46949.1;Name=TMR46949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_04730;product=IS66 family insertion sequence hypothetical protein;protein_id=TMR46949.1;transl_table=11 SOQE01000044.1 Genbank gene 58084 58416 . + . ID=gene-E3V84_04735;Name=E3V84_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04735 SOQE01000044.1 Protein Homology CDS 58084 58416 . + 0 ID=cds-TMR46950.1;Parent=gene-E3V84_04735;Dbxref=NCBI_GP:TMR46950.1;Name=TMR46950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827621.1;locus_tag=E3V84_04735;product=GMP synthase;protein_id=TMR46950.1;transl_table=11 SOQE01000044.1 Genbank pseudogene 58513 58716 . + . ID=gene-E3V84_04740;Name=E3V84_04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04740;pseudo=true SOQE01000044.1 Protein Homology CDS 58513 58716 . + 0 ID=cds-E3V84_04740;Parent=gene-E3V84_04740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V84_04740;product=IS66 family transposase;pseudo=true;transl_table=11 SOQE01000044.1 Genbank gene 58822 60099 . - . ID=gene-E3V84_04745;Name=E3V84_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04745 SOQE01000044.1 GeneMarkS-2+ CDS 58822 60099 . - 0 ID=cds-TMR46951.1;Parent=gene-E3V84_04745;Dbxref=NCBI_GP:TMR46951.1;Name=TMR46951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_04745;product=hypothetical protein;protein_id=TMR46951.1;transl_table=11 ##sequence-region SOQE01000045.1 1 2091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000045.1 Genbank region 1 2091 . + . ID=SOQE01000045.1:1..2091;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000045.1 Genbank gene 64 381 . - . ID=gene-E3V84_04750;Name=E3V84_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04750 SOQE01000045.1 Protein Homology CDS 64 381 . - 0 ID=cds-TMR46864.1;Parent=gene-E3V84_04750;Dbxref=NCBI_GP:TMR46864.1;Name=TMR46864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331856.1;locus_tag=E3V84_04750;product=transposase;protein_id=TMR46864.1;transl_table=11 SOQE01000045.1 Genbank gene 474 665 . - . ID=gene-E3V84_04755;Name=E3V84_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04755 SOQE01000045.1 Protein Homology CDS 474 665 . - 0 ID=cds-TMR46865.1;Parent=gene-E3V84_04755;Dbxref=NCBI_GP:TMR46865.1;Name=TMR46865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003069.1;locus_tag=E3V84_04755;product=XRE family transcriptional regulator;protein_id=TMR46865.1;transl_table=11 SOQE01000045.1 Genbank gene 736 852 . - . ID=gene-E3V84_04760;Name=E3V84_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04760 SOQE01000045.1 Protein Homology CDS 736 852 . - 0 ID=cds-TMR46866.1;Parent=gene-E3V84_04760;Dbxref=NCBI_GP:TMR46866.1;Name=TMR46866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11083.6;locus_tag=E3V84_04760;product=hypothetical protein;protein_id=TMR46866.1;transl_table=11 SOQE01000045.1 Genbank pseudogene 823 1061 . + . ID=gene-E3V84_04765;Name=E3V84_04765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04765;pseudo=true SOQE01000045.1 Protein Homology CDS 823 1061 . + 0 ID=cds-E3V84_04765;Parent=gene-E3V84_04765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821945.1;locus_tag=E3V84_04765;product=transposase;pseudo=true;transl_table=11 SOQE01000045.1 Genbank gene 1197 2091 . + . ID=gene-E3V84_04770;Name=E3V84_04770;end_range=2091,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04770;partial=true SOQE01000045.1 Protein Homology CDS 1197 2091 . + 0 ID=cds-TMR46867.1;Parent=gene-E3V84_04770;Dbxref=NCBI_GP:TMR46867.1;Name=TMR46867.1;end_range=2091,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033539.1;locus_tag=E3V84_04770;partial=true;product=IS1380 family transposase;protein_id=TMR46867.1;transl_table=11 ##sequence-region SOQE01000046.1 1 51790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000046.1 Genbank region 1 51790 . + . ID=SOQE01000046.1:1..51790;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000046.1 Genbank pseudogene 1 812 . + . ID=gene-E3V84_04775;Name=E3V84_04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04775;pseudo=true SOQE01000046.1 Protein Homology CDS 1 812 . + 1 ID=cds-E3V84_04775;Parent=gene-E3V84_04775;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_04775;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000046.1 Genbank gene 974 1456 . - . ID=gene-E3V84_04780;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=E3V84_04780 SOQE01000046.1 Protein Homology CDS 974 1456 . - 0 ID=cds-TMR46814.1;Parent=gene-E3V84_04780;Dbxref=NCBI_GP:TMR46814.1;Name=TMR46814.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370745.1;locus_tag=E3V84_04780;product=transcription elongation factor GreA;protein_id=TMR46814.1;transl_table=11 SOQE01000046.1 Genbank gene 1518 3188 . - . ID=gene-E3V84_04785;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=E3V84_04785 SOQE01000046.1 Protein Homology CDS 1518 3188 . - 0 ID=cds-TMR46815.1;Parent=gene-E3V84_04785;Dbxref=NCBI_GP:TMR46815.1;Name=TMR46815.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291668.1;locus_tag=E3V84_04785;product=endolytic transglycosylase MltG;protein_id=TMR46815.1;transl_table=11 SOQE01000046.1 Genbank gene 3269 3763 . - . ID=gene-E3V84_04790;Name=E3V84_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04790 SOQE01000046.1 Protein Homology CDS 3269 3763 . - 0 ID=cds-TMR46816.1;Parent=gene-E3V84_04790;Dbxref=NCBI_GP:TMR46816.1;Name=TMR46816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358964.1;locus_tag=E3V84_04790;product=N-acetyltransferase;protein_id=TMR46816.1;transl_table=11 SOQE01000046.1 Genbank gene 3760 4221 . - . ID=gene-E3V84_04795;Name=E3V84_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04795 SOQE01000046.1 Protein Homology CDS 3760 4221 . - 0 ID=cds-TMR46817.1;Parent=gene-E3V84_04795;Dbxref=NCBI_GP:TMR46817.1;Name=TMR46817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358965.1;locus_tag=E3V84_04795;product=GNAT family N-acetyltransferase;protein_id=TMR46817.1;transl_table=11 SOQE01000046.1 Genbank gene 4231 5565 . - . ID=gene-E3V84_04800;Name=E3V84_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04800 SOQE01000046.1 Protein Homology CDS 4231 5565 . - 0 ID=cds-TMR46818.1;Parent=gene-E3V84_04800;Dbxref=NCBI_GP:TMR46818.1;Name=TMR46818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358966.1;locus_tag=E3V84_04800;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=TMR46818.1;transl_table=11 SOQE01000046.1 Genbank gene 5576 6193 . - . ID=gene-E3V84_04805;Name=E3V84_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04805 SOQE01000046.1 Protein Homology CDS 5576 6193 . - 0 ID=cds-TMR46819.1;Parent=gene-E3V84_04805;Dbxref=NCBI_GP:TMR46819.1;Name=TMR46819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358967.1;locus_tag=E3V84_04805;product=cystathionine gamma-synthase;protein_id=TMR46819.1;transl_table=11 SOQE01000046.1 Genbank gene 6241 9339 . - . ID=gene-E3V84_04810;Name=E3V84_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04810 SOQE01000046.1 Protein Homology CDS 6241 9339 . - 0 ID=cds-TMR46820.1;Parent=gene-E3V84_04810;Dbxref=NCBI_GP:TMR46820.1;Name=TMR46820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358968.1;locus_tag=E3V84_04810;product=DEAD/DEAH box helicase;protein_id=TMR46820.1;transl_table=11 SOQE01000046.1 Genbank gene 9432 10598 . - . ID=gene-E3V84_04815;Name=E3V84_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04815 SOQE01000046.1 Protein Homology CDS 9432 10598 . - 0 ID=cds-TMR46821.1;Parent=gene-E3V84_04815;Dbxref=NCBI_GP:TMR46821.1;Name=TMR46821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521357.1;locus_tag=E3V84_04815;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR46821.1;transl_table=11 SOQE01000046.1 Genbank gene 10606 11700 . - . ID=gene-E3V84_04820;Name=E3V84_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04820 SOQE01000046.1 Protein Homology CDS 10606 11700 . - 0 ID=cds-TMR46822.1;Parent=gene-E3V84_04820;Dbxref=NCBI_GP:TMR46822.1;Name=TMR46822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358970.1;locus_tag=E3V84_04820;product=cystathionine gamma-synthase;protein_id=TMR46822.1;transl_table=11 SOQE01000046.1 Genbank gene 11858 13540 . - . ID=gene-E3V84_04825;Name=E3V84_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04825 SOQE01000046.1 Protein Homology CDS 11858 13540 . - 0 ID=cds-TMR46823.1;Parent=gene-E3V84_04825;Dbxref=NCBI_GP:TMR46823.1;Name=TMR46823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768988.1;locus_tag=E3V84_04825;product=ABC transporter ATP-binding protein;protein_id=TMR46823.1;transl_table=11 SOQE01000046.1 Genbank gene 13712 15670 . - . ID=gene-E3V84_04830;Name=E3V84_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04830 SOQE01000046.1 Protein Homology CDS 13712 15670 . - 0 ID=cds-TMR46824.1;Parent=gene-E3V84_04830;Dbxref=NCBI_GP:TMR46824.1;Name=TMR46824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358975.1;locus_tag=E3V84_04830;product=peptide ABC transporter substrate-binding protein;protein_id=TMR46824.1;transl_table=11 SOQE01000046.1 Genbank gene 15875 17497 . - . ID=gene-E3V84_04835;Name=E3V84_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04835 SOQE01000046.1 Protein Homology CDS 15875 17497 . - 0 ID=cds-TMR46825.1;Parent=gene-E3V84_04835;Dbxref=NCBI_GP:TMR46825.1;Name=TMR46825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358976.1;locus_tag=E3V84_04835;product=polysaccharide biosynthesis protein;protein_id=TMR46825.1;transl_table=11 SOQE01000046.1 Genbank gene 17603 19048 . + . ID=gene-E3V84_04840;Name=E3V84_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04840 SOQE01000046.1 Protein Homology CDS 17603 19048 . + 0 ID=cds-TMR46826.1;Parent=gene-E3V84_04840;Dbxref=NCBI_GP:TMR46826.1;Name=TMR46826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358977.1;locus_tag=E3V84_04840;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=TMR46826.1;transl_table=11 SOQE01000046.1 Genbank gene 19095 19286 . - . ID=gene-E3V84_04845;Name=E3V84_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04845 SOQE01000046.1 Protein Homology CDS 19095 19286 . - 0 ID=cds-TMR46827.1;Parent=gene-E3V84_04845;Dbxref=NCBI_GP:TMR46827.1;Name=TMR46827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446615.1;locus_tag=E3V84_04845;product=CsbD family protein;protein_id=TMR46827.1;transl_table=11 SOQE01000046.1 Genbank gene 19387 20037 . - . ID=gene-E3V84_04850;Name=E3V84_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04850 SOQE01000046.1 Protein Homology CDS 19387 20037 . - 0 ID=cds-TMR46828.1;Parent=gene-E3V84_04850;Dbxref=NCBI_GP:TMR46828.1;Name=TMR46828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614493.1;locus_tag=E3V84_04850;product=DUF1803 domain-containing protein;protein_id=TMR46828.1;transl_table=11 SOQE01000046.1 Genbank gene 20021 20515 . - . ID=gene-E3V84_04855;Name=E3V84_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04855 SOQE01000046.1 Protein Homology CDS 20021 20515 . - 0 ID=cds-TMR46829.1;Parent=gene-E3V84_04855;Dbxref=NCBI_GP:TMR46829.1;Name=TMR46829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446617.1;locus_tag=E3V84_04855;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TMR46829.1;transl_table=11 SOQE01000046.1 Genbank pseudogene 20513 20584 . + . ID=gene-E3V84_04860;Name=E3V84_04860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04860;pseudo=true SOQE01000046.1 Protein Homology CDS 20513 20584 . + 0 ID=cds-E3V84_04860;Parent=gene-E3V84_04860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_04860;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000046.1 Genbank gene 20726 21661 . - . ID=gene-E3V84_04865;Name=E3V84_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04865 SOQE01000046.1 Protein Homology CDS 20726 21661 . - 0 ID=cds-TMR46830.1;Parent=gene-E3V84_04865;Dbxref=NCBI_GP:TMR46830.1;Name=TMR46830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=E3V84_04865;product=manganese-dependent inorganic pyrophosphatase;protein_id=TMR46830.1;transl_table=11 SOQE01000046.1 Genbank pseudogene 21689 21766 . - . ID=gene-E3V84_04870;Name=E3V84_04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_04870;pseudo=true SOQE01000046.1 Protein Homology CDS 21689 21766 . - 0 ID=cds-E3V84_04870;Parent=gene-E3V84_04870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512670.1;locus_tag=E3V84_04870;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11 SOQE01000046.1 Genbank gene 21754 21846 . - . ID=gene-E3V84_04875;Name=E3V84_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04875 SOQE01000046.1 Protein Homology CDS 21754 21846 . - 0 ID=cds-TMR46862.1;Parent=gene-E3V84_04875;Dbxref=NCBI_GP:TMR46862.1;Name=TMR46862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V84_04875;product=lysyl-tRNA synthetase;protein_id=TMR46862.1;transl_table=11 SOQE01000046.1 Genbank gene 21932 22228 . - . ID=gene-E3V84_04880;Name=E3V84_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04880 SOQE01000046.1 Protein Homology CDS 21932 22228 . - 0 ID=cds-TMR46831.1;Parent=gene-E3V84_04880;Dbxref=NCBI_GP:TMR46831.1;Name=TMR46831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446619.1;locus_tag=E3V84_04880;product=GIY-YIG nuclease family protein;protein_id=TMR46831.1;transl_table=11 SOQE01000046.1 Genbank gene 22218 22967 . - . ID=gene-E3V84_04885;Name=E3V84_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04885 SOQE01000046.1 Protein Homology CDS 22218 22967 . - 0 ID=cds-TMR46832.1;Parent=gene-E3V84_04885;Dbxref=NCBI_GP:TMR46832.1;Name=TMR46832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390770.1;locus_tag=E3V84_04885;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=TMR46832.1;transl_table=11 SOQE01000046.1 Genbank gene 23021 23380 . - . ID=gene-E3V84_04890;Name=E3V84_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04890 SOQE01000046.1 Protein Homology CDS 23021 23380 . - 0 ID=cds-TMR46833.1;Parent=gene-E3V84_04890;Dbxref=NCBI_GP:TMR46833.1;Name=TMR46833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446621.1;locus_tag=E3V84_04890;product=S1 RNA-binding domain-containing protein;protein_id=TMR46833.1;transl_table=11 SOQE01000046.1 Genbank gene 23382 24782 . - . ID=gene-E3V84_04895;Name=E3V84_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04895 SOQE01000046.1 Protein Homology CDS 23382 24782 . - 0 ID=cds-TMR46834.1;Parent=gene-E3V84_04895;Dbxref=NCBI_GP:TMR46834.1;Name=TMR46834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446622.1;locus_tag=E3V84_04895;product=bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase;protein_id=TMR46834.1;transl_table=11 SOQE01000046.1 Genbank gene 24864 25367 . - . ID=gene-E3V84_04900;Name=E3V84_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04900 SOQE01000046.1 Protein Homology CDS 24864 25367 . - 0 ID=cds-TMR46835.1;Parent=gene-E3V84_04900;Dbxref=NCBI_GP:TMR46835.1;Name=TMR46835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152325.1;locus_tag=E3V84_04900;product=GNAT family N-acetyltransferase;protein_id=TMR46835.1;transl_table=11 SOQE01000046.1 Genbank gene 25591 25830 . - . ID=gene-E3V84_04905;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=E3V84_04905 SOQE01000046.1 Protein Homology CDS 25591 25830 . - 0 ID=cds-TMR46836.1;Parent=gene-E3V84_04905;Dbxref=NCBI_GP:TMR46836.1;Name=TMR46836.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=E3V84_04905;product=30S ribosomal protein S18;protein_id=TMR46836.1;transl_table=11 SOQE01000046.1 Genbank gene 25862 26332 . - . ID=gene-E3V84_04910;Name=E3V84_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04910 SOQE01000046.1 Protein Homology CDS 25862 26332 . - 0 ID=cds-TMR46837.1;Parent=gene-E3V84_04910;Dbxref=NCBI_GP:TMR46837.1;Name=TMR46837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446624.1;locus_tag=E3V84_04910;product=single-stranded DNA-binding protein;protein_id=TMR46837.1;transl_table=11 SOQE01000046.1 Genbank gene 26344 26634 . - . ID=gene-E3V84_04915;Name=E3V84_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04915 SOQE01000046.1 Protein Homology CDS 26344 26634 . - 0 ID=cds-TMR46838.1;Parent=gene-E3V84_04915;Dbxref=NCBI_GP:TMR46838.1;Name=TMR46838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446625.1;locus_tag=E3V84_04915;product=30S ribosomal protein S6;protein_id=TMR46838.1;transl_table=11 SOQE01000046.1 Genbank gene 26787 28130 . - . ID=gene-E3V84_04920;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=E3V84_04920 SOQE01000046.1 Protein Homology CDS 26787 28130 . - 0 ID=cds-TMR46839.1;Parent=gene-E3V84_04920;Dbxref=NCBI_GP:TMR46839.1;Name=TMR46839.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446627.1;locus_tag=E3V84_04920;product=asparagine--tRNA ligase;protein_id=TMR46839.1;transl_table=11 SOQE01000046.1 Genbank gene 28150 28515 . - . ID=gene-E3V84_04925;Name=E3V84_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04925 SOQE01000046.1 Protein Homology CDS 28150 28515 . - 0 ID=cds-TMR46840.1;Parent=gene-E3V84_04925;Dbxref=NCBI_GP:TMR46840.1;Name=TMR46840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446628.1;locus_tag=E3V84_04925;product=VOC family protein;protein_id=TMR46840.1;transl_table=11 SOQE01000046.1 Genbank gene 28508 29695 . - . ID=gene-E3V84_04930;Name=E3V84_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04930 SOQE01000046.1 Protein Homology CDS 28508 29695 . - 0 ID=cds-TMR46841.1;Parent=gene-E3V84_04930;Dbxref=NCBI_GP:TMR46841.1;Name=TMR46841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446629.1;locus_tag=E3V84_04930;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR46841.1;transl_table=11 SOQE01000046.1 Genbank gene 29692 30123 . - . ID=gene-E3V84_04935;Name=E3V84_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04935 SOQE01000046.1 Protein Homology CDS 29692 30123 . - 0 ID=cds-TMR46863.1;Parent=gene-E3V84_04935;Dbxref=NCBI_GP:TMR46863.1;Name=TMR46863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446630.1;locus_tag=E3V84_04935;product=peptidase;protein_id=TMR46863.1;transl_table=11 SOQE01000046.1 Genbank gene 30553 31101 . + . ID=gene-E3V84_04940;Name=E3V84_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04940 SOQE01000046.1 Protein Homology CDS 30553 31101 . + 0 ID=cds-TMR46842.1;Parent=gene-E3V84_04940;Dbxref=NCBI_GP:TMR46842.1;Name=TMR46842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446632.1;locus_tag=E3V84_04940;product=NAD(P)H-dependent oxidoreductase;protein_id=TMR46842.1;transl_table=11 SOQE01000046.1 Genbank gene 31228 31956 . - . ID=gene-E3V84_04945;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=E3V84_04945 SOQE01000046.1 Protein Homology CDS 31228 31956 . - 0 ID=cds-TMR46843.1;Parent=gene-E3V84_04945;Dbxref=NCBI_GP:TMR46843.1;Name=TMR46843.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446635.1;locus_tag=E3V84_04945;product=peroxide stress protein YaaA;protein_id=TMR46843.1;transl_table=11 SOQE01000046.1 Genbank gene 32140 32319 . - . ID=gene-E3V84_04950;Name=E3V84_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04950 SOQE01000046.1 Protein Homology CDS 32140 32319 . - 0 ID=cds-TMR46844.1;Parent=gene-E3V84_04950;Dbxref=NCBI_GP:TMR46844.1;Name=TMR46844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446642.1;locus_tag=E3V84_04950;product=DUF3953 domain-containing protein;protein_id=TMR46844.1;transl_table=11 SOQE01000046.1 Genbank gene 32483 34078 . - . ID=gene-E3V84_04955;Name=E3V84_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04955 SOQE01000046.1 Protein Homology CDS 32483 34078 . - 0 ID=cds-TMR46845.1;Parent=gene-E3V84_04955;Dbxref=NCBI_GP:TMR46845.1;Name=TMR46845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359000.1;locus_tag=E3V84_04955;product=hypothetical protein;protein_id=TMR46845.1;transl_table=11 SOQE01000046.1 Genbank gene 34090 34500 . - . ID=gene-E3V84_04960;Name=E3V84_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04960 SOQE01000046.1 Protein Homology CDS 34090 34500 . - 0 ID=cds-TMR46846.1;Parent=gene-E3V84_04960;Dbxref=NCBI_GP:TMR46846.1;Name=TMR46846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359001.1;locus_tag=E3V84_04960;product=peptide deformylase;protein_id=TMR46846.1;transl_table=11 SOQE01000046.1 Genbank gene 34760 35557 . - . ID=gene-E3V84_04965;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=E3V84_04965 SOQE01000046.1 Protein Homology CDS 34760 35557 . - 0 ID=cds-TMR46847.1;Parent=gene-E3V84_04965;Dbxref=NCBI_GP:TMR46847.1;Name=TMR46847.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277412.1;locus_tag=E3V84_04965;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=TMR46847.1;transl_table=11 SOQE01000046.1 Genbank gene 35570 38266 . - . ID=gene-E3V84_04970;Name=E3V84_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04970 SOQE01000046.1 Protein Homology CDS 35570 38266 . - 0 ID=cds-TMR46848.1;Parent=gene-E3V84_04970;Dbxref=NCBI_GP:TMR46848.1;Name=TMR46848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359003.1;locus_tag=E3V84_04970;product=cation-translocating P-type ATPase;protein_id=TMR46848.1;transl_table=11 SOQE01000046.1 Genbank gene 38574 39758 . + . ID=gene-E3V84_04975;Name=mntE;gbkey=Gene;gene=mntE;gene_biotype=protein_coding;locus_tag=E3V84_04975 SOQE01000046.1 Protein Homology CDS 38574 39758 . + 0 ID=cds-TMR46849.1;Parent=gene-E3V84_04975;Dbxref=NCBI_GP:TMR46849.1;Name=TMR46849.1;gbkey=CDS;gene=mntE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446646.1;locus_tag=E3V84_04975;product=CDF family manganese efflux transporter MntE;protein_id=TMR46849.1;transl_table=11 SOQE01000046.1 Genbank gene 39795 41666 . - . ID=gene-E3V84_04980;Name=E3V84_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04980 SOQE01000046.1 Protein Homology CDS 39795 41666 . - 0 ID=cds-TMR46850.1;Parent=gene-E3V84_04980;Dbxref=NCBI_GP:TMR46850.1;Name=TMR46850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446647.1;locus_tag=E3V84_04980;product=ABC transporter ATP-binding protein;protein_id=TMR46850.1;transl_table=11 SOQE01000046.1 Genbank gene 41663 42862 . - . ID=gene-E3V84_04985;Name=E3V84_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04985 SOQE01000046.1 Protein Homology CDS 41663 42862 . - 0 ID=cds-TMR46851.1;Parent=gene-E3V84_04985;Dbxref=NCBI_GP:TMR46851.1;Name=TMR46851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446648.1;locus_tag=E3V84_04985;product=CCA tRNA nucleotidyltransferase;protein_id=TMR46851.1;transl_table=11 SOQE01000046.1 Genbank gene 42859 43626 . - . ID=gene-E3V84_04990;Name=E3V84_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04990 SOQE01000046.1 Protein Homology CDS 42859 43626 . - 0 ID=cds-TMR46852.1;Parent=gene-E3V84_04990;Dbxref=NCBI_GP:TMR46852.1;Name=TMR46852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359007.1;locus_tag=E3V84_04990;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=TMR46852.1;transl_table=11 SOQE01000046.1 Genbank gene 43903 44751 . - . ID=gene-E3V84_04995;Name=E3V84_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_04995 SOQE01000046.1 Protein Homology CDS 43903 44751 . - 0 ID=cds-TMR46853.1;Parent=gene-E3V84_04995;Dbxref=NCBI_GP:TMR46853.1;Name=TMR46853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359008.1;locus_tag=E3V84_04995;product=DegV family protein;protein_id=TMR46853.1;transl_table=11 SOQE01000046.1 Genbank gene 44753 45127 . - . ID=gene-E3V84_05000;Name=E3V84_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05000 SOQE01000046.1 Protein Homology CDS 44753 45127 . - 0 ID=cds-TMR46854.1;Parent=gene-E3V84_05000;Dbxref=NCBI_GP:TMR46854.1;Name=TMR46854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050081.1;locus_tag=E3V84_05000;product=DUF1149 family protein;protein_id=TMR46854.1;transl_table=11 SOQE01000046.1 Genbank gene 45201 46553 . - . ID=gene-E3V84_05005;Name=E3V84_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05005 SOQE01000046.1 Protein Homology CDS 45201 46553 . - 0 ID=cds-TMR46855.1;Parent=gene-E3V84_05005;Dbxref=NCBI_GP:TMR46855.1;Name=TMR46855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446652.1;locus_tag=E3V84_05005;product=phosphoglucosamine mutase;protein_id=TMR46855.1;transl_table=11 SOQE01000046.1 Genbank gene 46578 47357 . - . ID=gene-E3V84_05010;Name=E3V84_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05010 SOQE01000046.1 Protein Homology CDS 46578 47357 . - 0 ID=cds-TMR46856.1;Parent=gene-E3V84_05010;Dbxref=NCBI_GP:TMR46856.1;Name=TMR46856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359011.1;locus_tag=E3V84_05010;product=hypothetical protein;protein_id=TMR46856.1;transl_table=11 SOQE01000046.1 Genbank gene 47344 48201 . - . ID=gene-E3V84_05015;Name=E3V84_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05015 SOQE01000046.1 Protein Homology CDS 47344 48201 . - 0 ID=cds-TMR46857.1;Parent=gene-E3V84_05015;Dbxref=NCBI_GP:TMR46857.1;Name=TMR46857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446654.1;locus_tag=E3V84_05015;product=TIGR00159 family protein;protein_id=TMR46857.1;transl_table=11 SOQE01000046.1 Genbank pseudogene 48119 48292 . - . ID=gene-E3V84_05020;Name=E3V84_05020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05020;pseudo=true SOQE01000046.1 Protein Homology CDS 48119 48292 . - 0 ID=cds-E3V84_05020;Parent=gene-E3V84_05020;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359013.1;locus_tag=E3V84_05020;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000046.1 Genbank gene 48337 49305 . + . ID=gene-E3V84_05025;Name=E3V84_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05025 SOQE01000046.1 Protein Homology CDS 48337 49305 . + 0 ID=cds-TMR46858.1;Parent=gene-E3V84_05025;Dbxref=NCBI_GP:TMR46858.1;Name=TMR46858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359014.1;locus_tag=E3V84_05025;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=TMR46858.1;transl_table=11 SOQE01000046.1 Genbank gene 49866 50045 . + . ID=gene-E3V84_05030;Name=E3V84_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05030 SOQE01000046.1 Protein Homology CDS 49866 50045 . + 0 ID=cds-TMR46859.1;Parent=gene-E3V84_05030;Dbxref=NCBI_GP:TMR46859.1;Name=TMR46859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209433.1;locus_tag=E3V84_05030;product=hypothetical protein;protein_id=TMR46859.1;transl_table=11 SOQE01000046.1 Genbank gene 50251 51207 . - . ID=gene-E3V84_05035;Name=E3V84_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05035 SOQE01000046.1 Protein Homology CDS 50251 51207 . - 0 ID=cds-TMR46860.1;Parent=gene-E3V84_05035;Dbxref=NCBI_GP:TMR46860.1;Name=TMR46860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=E3V84_05035;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR46860.1;transl_table=11 SOQE01000046.1 Genbank gene 51210 51539 . - . ID=gene-E3V84_05040;Name=E3V84_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05040 SOQE01000046.1 Protein Homology CDS 51210 51539 . - 0 ID=cds-TMR46861.1;Parent=gene-E3V84_05040;Dbxref=NCBI_GP:TMR46861.1;Name=TMR46861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191486.1;locus_tag=E3V84_05040;product=phage holin;protein_id=TMR46861.1;transl_table=11 ##sequence-region SOQE01000047.1 1 20397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000047.1 Genbank region 1 20397 . + . ID=SOQE01000047.1:1..20397;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000047.1 Genbank pseudogene 1 812 . + . ID=gene-E3V84_05045;Name=E3V84_05045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05045;pseudo=true SOQE01000047.1 Protein Homology CDS 1 812 . + 1 ID=cds-E3V84_05045;Parent=gene-E3V84_05045;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_05045;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000047.1 Genbank gene 929 2908 . + . ID=gene-E3V84_05050;Name=E3V84_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05050 SOQE01000047.1 Protein Homology CDS 929 2908 . + 0 ID=cds-TMR46797.1;Parent=gene-E3V84_05050;Dbxref=NCBI_GP:TMR46797.1;Name=TMR46797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357921.1;locus_tag=E3V84_05050;product=peptide ABC transporter substrate-binding protein;protein_id=TMR46797.1;transl_table=11 SOQE01000047.1 Genbank pseudogene 3027 4375 . + . ID=gene-E3V84_05055;Name=E3V84_05055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05055;pseudo=true SOQE01000047.1 Protein Homology CDS 3027 4375 . + 0 ID=cds-E3V84_05055;Parent=gene-E3V84_05055;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V84_05055;product=IS3 family transposase;pseudo=true;transl_table=11 SOQE01000047.1 Genbank gene 4513 6708 . - . ID=gene-E3V84_05060;Name=E3V84_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05060 SOQE01000047.1 Protein Homology CDS 4513 6708 . - 0 ID=cds-TMR46798.1;Parent=gene-E3V84_05060;Dbxref=NCBI_GP:TMR46798.1;Name=TMR46798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446857.1;locus_tag=E3V84_05060;product=PBP1A family penicillin-binding protein;protein_id=TMR46798.1;transl_table=11 SOQE01000047.1 Genbank gene 6705 7301 . - . ID=gene-E3V84_05065;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=E3V84_05065 SOQE01000047.1 Protein Homology CDS 6705 7301 . - 0 ID=cds-TMR46799.1;Parent=gene-E3V84_05065;Dbxref=NCBI_GP:TMR46799.1;Name=TMR46799.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357924.1;locus_tag=E3V84_05065;product=Holliday junction resolvase RecU;protein_id=TMR46799.1;transl_table=11 SOQE01000047.1 Genbank gene 7729 8109 . + . ID=gene-E3V84_05070;Name=E3V84_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05070 SOQE01000047.1 Protein Homology CDS 7729 8109 . + 0 ID=cds-TMR46800.1;Parent=gene-E3V84_05070;Dbxref=NCBI_GP:TMR46800.1;Name=TMR46800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284930.1;locus_tag=E3V84_05070;product=hypothetical protein;protein_id=TMR46800.1;transl_table=11 SOQE01000047.1 Genbank gene 8865 9449 . - . ID=gene-E3V84_05075;Name=E3V84_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05075 SOQE01000047.1 Protein Homology CDS 8865 9449 . - 0 ID=cds-TMR46801.1;Parent=gene-E3V84_05075;Dbxref=NCBI_GP:TMR46801.1;Name=TMR46801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04892.10;locus_tag=E3V84_05075;product=VanZ family protein;protein_id=TMR46801.1;transl_table=11 SOQE01000047.1 Genbank gene 9517 10044 . + . ID=gene-E3V84_05080;Name=E3V84_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05080 SOQE01000047.1 Protein Homology CDS 9517 10044 . + 0 ID=cds-TMR46802.1;Parent=gene-E3V84_05080;Dbxref=NCBI_GP:TMR46802.1;Name=TMR46802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357925.1;locus_tag=E3V84_05080;product=DUF1273 domain-containing protein;protein_id=TMR46802.1;transl_table=11 SOQE01000047.1 Genbank gene 10114 10455 . + . ID=gene-E3V84_05085;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=E3V84_05085 SOQE01000047.1 Protein Homology CDS 10114 10455 . + 0 ID=cds-TMR46803.1;Parent=gene-E3V84_05085;Dbxref=NCBI_GP:TMR46803.1;Name=TMR46803.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446854.1;locus_tag=E3V84_05085;product=cell division regulator GpsB;protein_id=TMR46803.1;transl_table=11 SOQE01000047.1 Genbank gene 10476 10856 . + . ID=gene-E3V84_05090;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=E3V84_05090 SOQE01000047.1 cmsearch RNase_P_RNA 10476 10856 . + . ID=rna-E3V84_05090;Parent=gene-E3V84_05090;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05090;product=RNase P RNA component class B SOQE01000047.1 cmsearch exon 10476 10856 . + . ID=exon-E3V84_05090-1;Parent=rna-E3V84_05090;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05090;product=RNase P RNA component class B SOQE01000047.1 Genbank gene 10940 12097 . + . ID=gene-E3V84_05095;Name=E3V84_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05095 SOQE01000047.1 Protein Homology CDS 10940 12097 . + 0 ID=cds-TMR46804.1;Parent=gene-E3V84_05095;Dbxref=NCBI_GP:TMR46804.1;Name=TMR46804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446853.1;locus_tag=E3V84_05095;product=class I SAM-dependent RNA methyltransferase;protein_id=TMR46804.1;transl_table=11 SOQE01000047.1 Genbank gene 12110 13516 . + . ID=gene-E3V84_05100;Name=mapZ;gbkey=Gene;gene=mapZ;gene_biotype=protein_coding;locus_tag=E3V84_05100 SOQE01000047.1 Protein Homology CDS 12110 13516 . + 0 ID=cds-TMR46805.1;Parent=gene-E3V84_05100;Dbxref=NCBI_GP:TMR46805.1;Name=TMR46805.1;gbkey=CDS;gene=mapZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357928.1;locus_tag=E3V84_05100;product=mid-cell-anchored protein MapZ;protein_id=TMR46805.1;transl_table=11 SOQE01000047.1 Genbank gene 13592 15016 . + . ID=gene-E3V84_05105;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=E3V84_05105 SOQE01000047.1 Protein Homology CDS 13592 15016 . + 0 ID=cds-TMR46806.1;Parent=gene-E3V84_05105;Dbxref=NCBI_GP:TMR46806.1;Name=TMR46806.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185725.1;locus_tag=E3V84_05105;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=TMR46806.1;transl_table=11 SOQE01000047.1 Genbank gene 15028 15717 . + . ID=gene-E3V84_05110;Name=E3V84_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05110 SOQE01000047.1 Protein Homology CDS 15028 15717 . + 0 ID=cds-TMR46807.1;Parent=gene-E3V84_05110;Dbxref=NCBI_GP:TMR46807.1;Name=TMR46807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357930.1;locus_tag=E3V84_05110;product=response regulator transcription factor;protein_id=TMR46807.1;transl_table=11 SOQE01000047.1 Genbank gene 15815 16813 . + . ID=gene-E3V84_05115;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=protein_coding;locus_tag=E3V84_05115 SOQE01000047.1 Protein Homology CDS 15815 16813 . + 0 ID=cds-TMR46808.1;Parent=gene-E3V84_05115;Dbxref=NCBI_GP:TMR46808.1;Name=TMR46808.1;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V84_05115;product=choline-binding protein CbpJ;protein_id=TMR46808.1;transl_table=11 SOQE01000047.1 Genbank gene 16931 18163 . - . ID=gene-E3V84_05120;Name=E3V84_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05120 SOQE01000047.1 Protein Homology CDS 16931 18163 . - 0 ID=cds-TMR46809.1;Parent=gene-E3V84_05120;Dbxref=NCBI_GP:TMR46809.1;Name=TMR46809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765682.1;locus_tag=E3V84_05120;product=MFS transporter;protein_id=TMR46809.1;transl_table=11 SOQE01000047.1 Genbank pseudogene 18206 18613 . - . ID=gene-E3V84_05125;Name=E3V84_05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05125;pseudo=true SOQE01000047.1 Protein Homology CDS 18206 18613 . - 0 ID=cds-E3V84_05125;Parent=gene-E3V84_05125;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499613.1;locus_tag=E3V84_05125;product=lanthionine synthetase;pseudo=true;transl_table=11 SOQE01000047.1 Genbank pseudogene 18681 19018 . - . ID=gene-E3V84_05130;Name=E3V84_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05130;pseudo=true SOQE01000047.1 Protein Homology CDS 18681 19018 . - 0 ID=cds-E3V84_05130;Parent=gene-E3V84_05130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811282.1;locus_tag=E3V84_05130;product=lantibiotic-modifying protein;pseudo=true;transl_table=11 SOQE01000047.1 Genbank pseudogene 19029 19222 . + . ID=gene-E3V84_05135;Name=E3V84_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05135;pseudo=true SOQE01000047.1 Protein Homology CDS 19029 19222 . + 0 ID=cds-E3V84_05135;Parent=gene-E3V84_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315043.1;locus_tag=E3V84_05135;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000047.1 Genbank pseudogene 19513 20106 . - . ID=gene-E3V84_05140;Name=E3V84_05140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05140;pseudo=true SOQE01000047.1 Protein Homology CDS 19513 20106 . - 0 ID=cds-E3V84_05140;Parent=gene-E3V84_05140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V84_05140;product=IS3 family transposase;pseudo=true;transl_table=11 SOQE01000047.1 Genbank gene 20138 20397 . + . ID=gene-E3V84_05145;Name=E3V84_05145;end_range=20397,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05145;partial=true SOQE01000047.1 Protein Homology CDS 20138 20397 . + 0 ID=cds-TMR46810.1;Parent=gene-E3V84_05145;Dbxref=NCBI_GP:TMR46810.1;Name=TMR46810.1;end_range=20397,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_05145;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR46810.1;transl_table=11 ##sequence-region SOQE01000048.1 1 33831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000048.1 Genbank region 1 33831 . + . ID=SOQE01000048.1:1..33831;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000048.1 Genbank gene 1 260 . - . ID=gene-E3V84_05150;Name=E3V84_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05150;partial=true;start_range=.,1 SOQE01000048.1 Protein Homology CDS 1 260 . - 0 ID=cds-TMR46633.1;Parent=gene-E3V84_05150;Dbxref=NCBI_GP:TMR46633.1;Name=TMR46633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_05150;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR46633.1;start_range=.,1;transl_table=11 SOQE01000048.1 Genbank gene 441 779 . + . ID=gene-E3V84_05155;Name=E3V84_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05155 SOQE01000048.1 Protein Homology CDS 441 779 . + 0 ID=cds-TMR46661.1;Parent=gene-E3V84_05155;Dbxref=NCBI_GP:TMR46661.1;Name=TMR46661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359465.1;locus_tag=E3V84_05155;product=MarR family transcriptional regulator;protein_id=TMR46661.1;transl_table=11 SOQE01000048.1 Genbank gene 790 1152 . + . ID=gene-E3V84_05160;Name=E3V84_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05160 SOQE01000048.1 Protein Homology CDS 790 1152 . + 0 ID=cds-TMR46634.1;Parent=gene-E3V84_05160;Dbxref=NCBI_GP:TMR46634.1;Name=TMR46634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022857.1;locus_tag=E3V84_05160;product=DUF1304 domain-containing protein;protein_id=TMR46634.1;transl_table=11 SOQE01000048.1 Genbank gene 1265 1909 . + . ID=gene-E3V84_05165;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=E3V84_05165 SOQE01000048.1 Protein Homology CDS 1265 1909 . + 0 ID=cds-TMR46635.1;Parent=gene-E3V84_05165;Dbxref=NCBI_GP:TMR46635.1;Name=TMR46635.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445350.1;locus_tag=E3V84_05165;product=pyroglutamyl-peptidase I;protein_id=TMR46635.1;transl_table=11 SOQE01000048.1 Genbank gene 2027 2905 . - . ID=gene-E3V84_05170;Name=E3V84_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05170 SOQE01000048.1 Protein Homology CDS 2027 2905 . - 0 ID=cds-TMR46636.1;Parent=gene-E3V84_05170;Dbxref=NCBI_GP:TMR46636.1;Name=TMR46636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445351.1;locus_tag=E3V84_05170;product=DUF975 family protein;protein_id=TMR46636.1;transl_table=11 SOQE01000048.1 Genbank gene 3022 4164 . + . ID=gene-E3V84_05175;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=E3V84_05175 SOQE01000048.1 Protein Homology CDS 3022 4164 . + 0 ID=cds-TMR46637.1;Parent=gene-E3V84_05175;Dbxref=NCBI_GP:TMR46637.1;Name=TMR46637.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298827.1;locus_tag=E3V84_05175;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=TMR46637.1;transl_table=11 SOQE01000048.1 Genbank gene 4265 6082 . + . ID=gene-E3V84_05180;Name=E3V84_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05180 SOQE01000048.1 Protein Homology CDS 4265 6082 . + 0 ID=cds-TMR46638.1;Parent=gene-E3V84_05180;Dbxref=NCBI_GP:TMR46638.1;Name=TMR46638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445353.1;locus_tag=E3V84_05180;product=acetyltransferase;protein_id=TMR46638.1;transl_table=11 SOQE01000048.1 Genbank pseudogene 6339 6740 . + . ID=gene-E3V84_05185;Name=E3V84_05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05185;pseudo=true SOQE01000048.1 Protein Homology CDS 6339 6740 . + 0 ID=cds-E3V84_05185;Parent=gene-E3V84_05185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_05185;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 SOQE01000048.1 Genbank gene 6978 8129 . - . ID=gene-E3V84_05190;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=E3V84_05190 SOQE01000048.1 Protein Homology CDS 6978 8129 . - 0 ID=cds-TMR46639.1;Parent=gene-E3V84_05190;Dbxref=NCBI_GP:TMR46639.1;Name=TMR46639.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359458.1;locus_tag=E3V84_05190;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TMR46639.1;transl_table=11 SOQE01000048.1 Genbank gene 8410 9036 . + . ID=gene-E3V84_05195;Name=E3V84_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05195 SOQE01000048.1 Protein Homology CDS 8410 9036 . + 0 ID=cds-TMR46640.1;Parent=gene-E3V84_05195;Dbxref=NCBI_GP:TMR46640.1;Name=TMR46640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446730.1;locus_tag=E3V84_05195;product=guanylate kinase;protein_id=TMR46640.1;transl_table=11 SOQE01000048.1 Genbank gene 9061 9375 . + . ID=gene-E3V84_05200;Name=E3V84_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05200 SOQE01000048.1 Protein Homology CDS 9061 9375 . + 0 ID=cds-TMR46641.1;Parent=gene-E3V84_05200;Dbxref=NCBI_GP:TMR46641.1;Name=TMR46641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359174.1;locus_tag=E3V84_05200;product=DNA-directed RNA polymerase subunit omega;protein_id=TMR46641.1;transl_table=11 SOQE01000048.1 Genbank gene 9441 11837 . + . ID=gene-E3V84_05205;Name=E3V84_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05205 SOQE01000048.1 Protein Homology CDS 9441 11837 . + 0 ID=cds-TMR46642.1;Parent=gene-E3V84_05205;Dbxref=NCBI_GP:TMR46642.1;Name=TMR46642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446728.1;locus_tag=E3V84_05205;product=primosomal protein N';protein_id=TMR46642.1;transl_table=11 SOQE01000048.1 Genbank gene 11850 12785 . + . ID=gene-E3V84_05210;Name=E3V84_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05210 SOQE01000048.1 Protein Homology CDS 11850 12785 . + 0 ID=cds-TMR46643.1;Parent=gene-E3V84_05210;Dbxref=NCBI_GP:TMR46643.1;Name=TMR46643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446727.1;locus_tag=E3V84_05210;product=methionyl-tRNA formyltransferase;protein_id=TMR46643.1;transl_table=11 SOQE01000048.1 Genbank gene 12775 14091 . + . ID=gene-E3V84_05215;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=E3V84_05215 SOQE01000048.1 Protein Homology CDS 12775 14091 . + 0 ID=cds-TMR46644.1;Parent=gene-E3V84_05215;Dbxref=NCBI_GP:TMR46644.1;Name=TMR46644.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359171.1;locus_tag=E3V84_05215;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=TMR46644.1;transl_table=11 SOQE01000048.1 Genbank gene 14106 14846 . + . ID=gene-E3V84_05220;Name=E3V84_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05220 SOQE01000048.1 Protein Homology CDS 14106 14846 . + 0 ID=cds-TMR46645.1;Parent=gene-E3V84_05220;Dbxref=NCBI_GP:TMR46645.1;Name=TMR46645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359170.1;locus_tag=E3V84_05220;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=TMR46645.1;transl_table=11 SOQE01000048.1 Genbank gene 14843 16822 . + . ID=gene-E3V84_05225;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=E3V84_05225 SOQE01000048.1 Protein Homology CDS 14843 16822 . + 0 ID=cds-TMR46646.1;Parent=gene-E3V84_05225;Dbxref=NCBI_GP:TMR46646.1;Name=TMR46646.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359169.1;locus_tag=E3V84_05225;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=TMR46646.1;transl_table=11 SOQE01000048.1 Genbank gene 16937 17695 . + . ID=gene-E3V84_05230;Name=E3V84_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05230 SOQE01000048.1 Protein Homology CDS 16937 17695 . + 0 ID=cds-TMR46647.1;Parent=gene-E3V84_05230;Dbxref=NCBI_GP:TMR46647.1;Name=TMR46647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446723.1;locus_tag=E3V84_05230;product=threonine/serine exporter;protein_id=TMR46647.1;transl_table=11 SOQE01000048.1 Genbank gene 17697 18146 . + . ID=gene-E3V84_05235;Name=E3V84_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05235 SOQE01000048.1 Protein Homology CDS 17697 18146 . + 0 ID=cds-TMR46648.1;Parent=gene-E3V84_05235;Dbxref=NCBI_GP:TMR46648.1;Name=TMR46648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359167.1;locus_tag=E3V84_05235;product=threonine/serine exporter family protein;protein_id=TMR46648.1;transl_table=11 SOQE01000048.1 Genbank gene 18268 18555 . + . ID=gene-E3V84_05240;Name=E3V84_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05240 SOQE01000048.1 Protein Homology CDS 18268 18555 . + 0 ID=cds-TMR46662.1;Parent=gene-E3V84_05240;Dbxref=NCBI_GP:TMR46662.1;Name=TMR46662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359164.1;locus_tag=E3V84_05240;product=hypothetical protein;protein_id=TMR46662.1;transl_table=11 SOQE01000048.1 Genbank gene 18662 19858 . + . ID=gene-E3V84_05245;Name=E3V84_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05245 SOQE01000048.1 Protein Homology CDS 18662 19858 . + 0 ID=cds-TMR46649.1;Parent=gene-E3V84_05245;Dbxref=NCBI_GP:TMR46649.1;Name=TMR46649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359163.1;locus_tag=E3V84_05245;product=hydroxymethylglutaryl-CoA synthase;protein_id=TMR46649.1;transl_table=11 SOQE01000048.1 Genbank gene 19858 21132 . + . ID=gene-E3V84_05250;Name=E3V84_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05250 SOQE01000048.1 Protein Homology CDS 19858 21132 . + 0 ID=cds-TMR46650.1;Parent=gene-E3V84_05250;Dbxref=NCBI_GP:TMR46650.1;Name=TMR46650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359162.1;locus_tag=E3V84_05250;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=TMR46650.1;transl_table=11 SOQE01000048.1 Genbank gene 21168 22133 . - . ID=gene-E3V84_05255;Name=E3V84_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05255 SOQE01000048.1 Protein Homology CDS 21168 22133 . - 0 ID=cds-TMR46651.1;Parent=gene-E3V84_05255;Dbxref=NCBI_GP:TMR46651.1;Name=TMR46651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446719.1;locus_tag=E3V84_05255;product=LacI family transcriptional regulator;protein_id=TMR46651.1;transl_table=11 SOQE01000048.1 Genbank gene 22114 23568 . - . ID=gene-E3V84_05260;Name=E3V84_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05260 SOQE01000048.1 Protein Homology CDS 22114 23568 . - 0 ID=cds-TMR46652.1;Parent=gene-E3V84_05260;Dbxref=NCBI_GP:TMR46652.1;Name=TMR46652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446718.1;locus_tag=E3V84_05260;product=glycoside hydrolase family 32 protein;protein_id=TMR46652.1;transl_table=11 SOQE01000048.1 Genbank gene 23937 25823 . + . ID=gene-E3V84_05265;Name=E3V84_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05265 SOQE01000048.1 Protein Homology CDS 23937 25823 . + 0 ID=cds-TMR46653.1;Parent=gene-E3V84_05265;Dbxref=NCBI_GP:TMR46653.1;Name=TMR46653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064575.1;locus_tag=E3V84_05265;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=TMR46653.1;transl_table=11 SOQE01000048.1 Genbank gene 25972 26859 . + . ID=gene-E3V84_05270;Name=E3V84_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05270 SOQE01000048.1 Protein Homology CDS 25972 26859 . + 0 ID=cds-TMR46654.1;Parent=gene-E3V84_05270;Dbxref=NCBI_GP:TMR46654.1;Name=TMR46654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446716.1;locus_tag=E3V84_05270;product=ROK family protein;protein_id=TMR46654.1;transl_table=11 SOQE01000048.1 Genbank gene 26902 27519 . - . ID=gene-E3V84_05275;Name=E3V84_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05275 SOQE01000048.1 Protein Homology CDS 26902 27519 . - 0 ID=cds-TMR46655.1;Parent=gene-E3V84_05275;Dbxref=NCBI_GP:TMR46655.1;Name=TMR46655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446715.1;locus_tag=E3V84_05275;product=TVP38/TMEM64 family protein;protein_id=TMR46655.1;transl_table=11 SOQE01000048.1 Genbank pseudogene 27922 28203 . - . ID=gene-E3V84_05280;Name=E3V84_05280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05280;pseudo=true SOQE01000048.1 Protein Homology CDS 27922 28203 . - 0 ID=cds-E3V84_05280;Parent=gene-E3V84_05280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V84_05280;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000048.1 Genbank pseudogene 28200 28349 . + . ID=gene-E3V84_05285;Name=E3V84_05285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05285;pseudo=true SOQE01000048.1 Protein Homology CDS 28200 28349 . + 0 ID=cds-E3V84_05285;Parent=gene-E3V84_05285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267158.1;locus_tag=E3V84_05285;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 SOQE01000048.1 Genbank pseudogene 28543 28623 . - . ID=gene-E3V84_05290;Name=E3V84_05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05290;pseudo=true SOQE01000048.1 Protein Homology CDS 28543 28623 . - 0 ID=cds-E3V84_05290;Parent=gene-E3V84_05290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820552.1;locus_tag=E3V84_05290;product=UDP-galactopyranose mutase;pseudo=true;transl_table=11 SOQE01000048.1 Genbank gene 28740 29651 . + . ID=gene-E3V84_05295;Name=E3V84_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05295 SOQE01000048.1 Protein Homology CDS 28740 29651 . + 0 ID=cds-TMR46656.1;Parent=gene-E3V84_05295;Dbxref=NCBI_GP:TMR46656.1;Name=TMR46656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895307.1;locus_tag=E3V84_05295;product=ABC transporter ATP-binding protein;protein_id=TMR46656.1;transl_table=11 SOQE01000048.1 Genbank gene 29630 30829 . + . ID=gene-E3V84_05300;Name=E3V84_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05300 SOQE01000048.1 Protein Homology CDS 29630 30829 . + 0 ID=cds-TMR46657.1;Parent=gene-E3V84_05300;Dbxref=NCBI_GP:TMR46657.1;Name=TMR46657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359154.1;locus_tag=E3V84_05300;product=ABC transporter permease;protein_id=TMR46657.1;transl_table=11 SOQE01000048.1 Genbank gene 31790 32485 . - . ID=gene-E3V84_05305;Name=E3V84_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05305 SOQE01000048.1 Protein Homology CDS 31790 32485 . - 0 ID=cds-TMR46658.1;Parent=gene-E3V84_05305;Dbxref=NCBI_GP:TMR46658.1;Name=TMR46658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445694.1;locus_tag=E3V84_05305;product=LrgB family protein;protein_id=TMR46658.1;transl_table=11 SOQE01000048.1 Genbank gene 32482 32856 . - . ID=gene-E3V84_05310;Name=E3V84_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05310 SOQE01000048.1 Protein Homology CDS 32482 32856 . - 0 ID=cds-TMR46659.1;Parent=gene-E3V84_05310;Dbxref=NCBI_GP:TMR46659.1;Name=TMR46659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445693.1;locus_tag=E3V84_05310;product=CidA/LrgA family protein;protein_id=TMR46659.1;transl_table=11 SOQE01000048.1 Genbank pseudogene 33041 33343 . - . ID=gene-E3V84_05315;Name=E3V84_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05315;pseudo=true SOQE01000048.1 Protein Homology CDS 33041 33343 . - 0 ID=cds-E3V84_05315;Parent=gene-E3V84_05315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445695.1;locus_tag=E3V84_05315;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 SOQE01000048.1 Genbank gene 33560 33727 . - . ID=gene-E3V84_05320;Name=E3V84_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05320 SOQE01000048.1 Protein Homology CDS 33560 33727 . - 0 ID=cds-TMR46660.1;Parent=gene-E3V84_05320;Dbxref=NCBI_GP:TMR46660.1;Name=TMR46660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285044.1;locus_tag=E3V84_05320;product=choline-binding protein A;protein_id=TMR46660.1;transl_table=11 SOQE01000048.1 Genbank gene 33746 33831 . + . ID=gene-E3V84_05325;Name=E3V84_05325;end_range=33831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05325;partial=true SOQE01000048.1 Protein Homology CDS 33746 33831 . + 0 ID=cds-TMR46663.1;Parent=gene-E3V84_05325;Dbxref=NCBI_GP:TMR46663.1;Name=TMR46663.1;end_range=33831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_05325;partial=true;product=hypothetical protein;protein_id=TMR46663.1;transl_table=11 ##sequence-region SOQE01000049.1 1 1286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000049.1 Genbank region 1 1286 . + . ID=SOQE01000049.1:1..1286;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000049.1 Genbank gene 1 941 . + . ID=gene-E3V84_05330;Name=E3V84_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05330;partial=true;start_range=.,1 SOQE01000049.1 Protein Homology CDS 1 941 . + 2 ID=cds-TMR46632.1;Parent=gene-E3V84_05330;Dbxref=NCBI_GP:TMR46632.1;Name=TMR46632.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V84_05330;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR46632.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000005.1 1 53778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000005.1 Genbank region 1 53778 . + . ID=SOQE01000005.1:1..53778;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000005.1 Genbank gene 1 3508 . - . ID=gene-E3V84_00405;Name=E3V84_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00405;partial=true;start_range=.,1 SOQE01000005.1 Protein Homology CDS 1 3508 . - 0 ID=cds-TMR48759.1;Parent=gene-E3V84_00405;Dbxref=NCBI_GP:TMR48759.1;Name=TMR48759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07554.11%2CHMM:PF07564.9;locus_tag=E3V84_00405;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR48759.1;start_range=.,1;transl_table=11 SOQE01000005.1 Genbank pseudogene 4075 4508 . - . ID=gene-E3V84_00410;Name=E3V84_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00410;pseudo=true SOQE01000005.1 Protein Homology CDS 4075 4508 . - 0 ID=cds-E3V84_00410;Parent=gene-E3V84_00410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096818.1;locus_tag=E3V84_00410;product=preprotein translocase subunit SecB;pseudo=true;transl_table=11 SOQE01000005.1 Genbank gene 4508 4852 . - . ID=gene-E3V84_00415;Name=E3V84_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00415 SOQE01000005.1 Protein Homology CDS 4508 4852 . - 0 ID=cds-TMR48760.1;Parent=gene-E3V84_00415;Dbxref=NCBI_GP:TMR48760.1;Name=TMR48760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002962.1;locus_tag=E3V84_00415;product=hypothetical protein;protein_id=TMR48760.1;transl_table=11 SOQE01000005.1 Genbank gene 4867 5436 . - . ID=gene-E3V84_00420;Name=E3V84_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00420 SOQE01000005.1 Protein Homology CDS 4867 5436 . - 0 ID=cds-TMR48761.1;Parent=gene-E3V84_00420;Dbxref=NCBI_GP:TMR48761.1;Name=TMR48761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509514.1;locus_tag=E3V84_00420;product=hypothetical protein;protein_id=TMR48761.1;transl_table=11 SOQE01000005.1 Genbank pseudogene 5759 6233 . - . ID=gene-E3V84_00425;Name=E3V84_00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00425;pseudo=true SOQE01000005.1 Protein Homology CDS 5759 6233 . - 0 ID=cds-E3V84_00425;Parent=gene-E3V84_00425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335061.1;locus_tag=E3V84_00425;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000005.1 Genbank gene 6943 7305 . - . ID=gene-E3V84_00430;Name=E3V84_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00430 SOQE01000005.1 Protein Homology CDS 6943 7305 . - 0 ID=cds-TMR48762.1;Parent=gene-E3V84_00430;Dbxref=NCBI_GP:TMR48762.1;Name=TMR48762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604884.1;locus_tag=E3V84_00430;product=hypothetical protein;protein_id=TMR48762.1;transl_table=11 SOQE01000005.1 Genbank gene 7568 9448 . - . ID=gene-E3V84_00435;Name=E3V84_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00435 SOQE01000005.1 Protein Homology CDS 7568 9448 . - 0 ID=cds-TMR48763.1;Parent=gene-E3V84_00435;Dbxref=NCBI_GP:TMR48763.1;Name=TMR48763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359540.1;locus_tag=E3V84_00435;product=beta-N-acetylhexosaminidase;protein_id=TMR48763.1;transl_table=11 SOQE01000005.1 Genbank gene 9442 10323 . - . ID=gene-E3V84_00440;Name=E3V84_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00440 SOQE01000005.1 Protein Homology CDS 9442 10323 . - 0 ID=cds-TMR48764.1;Parent=gene-E3V84_00440;Dbxref=NCBI_GP:TMR48764.1;Name=TMR48764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447093.1;locus_tag=E3V84_00440;product=ROK family protein;protein_id=TMR48764.1;transl_table=11 SOQE01000005.1 Genbank gene 10395 13040 . - . ID=gene-E3V84_00445;Name=E3V84_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00445 SOQE01000005.1 Protein Homology CDS 10395 13040 . - 0 ID=cds-TMR48765.1;Parent=gene-E3V84_00445;Dbxref=NCBI_GP:TMR48765.1;Name=TMR48765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447094.1;locus_tag=E3V84_00445;product=alpha-mannosidase;protein_id=TMR48765.1;transl_table=11 SOQE01000005.1 Genbank gene 13131 14411 . - . ID=gene-E3V84_00450;Name=E3V84_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00450 SOQE01000005.1 Protein Homology CDS 13131 14411 . - 0 ID=cds-TMR48766.1;Parent=gene-E3V84_00450;Dbxref=NCBI_GP:TMR48766.1;Name=TMR48766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447095.1;locus_tag=E3V84_00450;product=glycoside hydrolase family 125 protein;protein_id=TMR48766.1;transl_table=11 SOQE01000005.1 Genbank gene 14582 16678 . + . ID=gene-E3V84_00455;Name=E3V84_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00455 SOQE01000005.1 Protein Homology CDS 14582 16678 . + 0 ID=cds-TMR48767.1;Parent=gene-E3V84_00455;Dbxref=NCBI_GP:TMR48767.1;Name=TMR48767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399394.1;locus_tag=E3V84_00455;product=alpha-mannosidase;protein_id=TMR48767.1;transl_table=11 SOQE01000005.1 Genbank pseudogene 16791 23946 . - . ID=gene-E3V84_00460;Name=E3V84_00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00460;pseudo=true SOQE01000005.1 Protein Homology CDS 16791 23946 . - 0 ID=cds-E3V84_00460;Parent=gene-E3V84_00460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446414.1;locus_tag=E3V84_00460;product=DUF1542 domain-containing protein;pseudo=true;transl_table=11 SOQE01000005.1 Genbank gene 25102 25692 . - . ID=gene-E3V84_00465;Name=E3V84_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00465 SOQE01000005.1 Protein Homology CDS 25102 25692 . - 0 ID=cds-TMR48768.1;Parent=gene-E3V84_00465;Dbxref=NCBI_GP:TMR48768.1;Name=TMR48768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490634.1;locus_tag=E3V84_00465;product=adenylosuccinate lyase;protein_id=TMR48768.1;transl_table=11 SOQE01000005.1 Genbank gene 25850 26146 . - . ID=gene-E3V84_00470;Name=E3V84_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00470 SOQE01000005.1 Protein Homology CDS 25850 26146 . - 0 ID=cds-TMR48769.1;Parent=gene-E3V84_00470;Dbxref=NCBI_GP:TMR48769.1;Name=TMR48769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445203.1;locus_tag=E3V84_00470;product=hypothetical protein;protein_id=TMR48769.1;transl_table=11 SOQE01000005.1 Genbank gene 26139 26255 . - . ID=gene-E3V84_00475;Name=E3V84_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00475 SOQE01000005.1 Protein Homology CDS 26139 26255 . - 0 ID=cds-TMR48770.1;Parent=gene-E3V84_00475;Dbxref=NCBI_GP:TMR48770.1;Name=TMR48770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233180.1;locus_tag=E3V84_00475;product=damage-inducible protein CinA;protein_id=TMR48770.1;transl_table=11 SOQE01000005.1 Genbank gene 26303 26695 . - . ID=gene-E3V84_00480;Name=E3V84_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00480 SOQE01000005.1 Protein Homology CDS 26303 26695 . - 0 ID=cds-TMR48771.1;Parent=gene-E3V84_00480;Dbxref=NCBI_GP:TMR48771.1;Name=TMR48771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240924.1;locus_tag=E3V84_00480;product=flagellar assembly protein H domain protein;protein_id=TMR48771.1;transl_table=11 SOQE01000005.1 Genbank gene 26732 27766 . - . ID=gene-E3V84_00485;Name=E3V84_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00485 SOQE01000005.1 Protein Homology CDS 26732 27766 . - 0 ID=cds-TMR48772.1;Parent=gene-E3V84_00485;Dbxref=NCBI_GP:TMR48772.1;Name=TMR48772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=E3V84_00485;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=TMR48772.1;transl_table=11 SOQE01000005.1 Genbank gene 27867 29555 . - . ID=gene-E3V84_00490;Name=E3V84_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00490 SOQE01000005.1 Protein Homology CDS 27867 29555 . - 0 ID=cds-TMR48773.1;Parent=gene-E3V84_00490;Dbxref=NCBI_GP:TMR48773.1;Name=TMR48773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251210.1;locus_tag=E3V84_00490;product=alpha-L-fucosidase;protein_id=TMR48773.1;transl_table=11 SOQE01000005.1 Genbank gene 29557 33345 . - . ID=gene-E3V84_00495;Name=E3V84_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00495 SOQE01000005.1 Protein Homology CDS 29557 33345 . - 0 ID=cds-TMR48774.1;Parent=gene-E3V84_00495;Dbxref=NCBI_GP:TMR48774.1;Name=TMR48774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250572.1;locus_tag=E3V84_00495;product=DUF4982 domain-containing protein;protein_id=TMR48774.1;transl_table=11 SOQE01000005.1 Genbank gene 33583 39867 . - . ID=gene-E3V84_00500;Name=E3V84_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00500 SOQE01000005.1 Protein Homology CDS 33583 39867 . - 0 ID=cds-TMR48775.1;Parent=gene-E3V84_00500;Dbxref=NCBI_GP:TMR48775.1;Name=TMR48775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017374.1;locus_tag=E3V84_00500;product=YSIRK-type signal peptide-containing protein;protein_id=TMR48775.1;transl_table=11 SOQE01000005.1 Genbank pseudogene 40109 40183 . - . ID=gene-E3V84_00505;Name=E3V84_00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00505;pseudo=true SOQE01000005.1 Protein Homology CDS 40109 40183 . - 0 ID=cds-E3V84_00505;Parent=gene-E3V84_00505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=E3V84_00505;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000005.1 Genbank gene 40267 41166 . - . ID=gene-E3V84_00510;Name=E3V84_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00510 SOQE01000005.1 Protein Homology CDS 40267 41166 . - 0 ID=cds-TMR48776.1;Parent=gene-E3V84_00510;Dbxref=NCBI_GP:TMR48776.1;Name=TMR48776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359553.1;locus_tag=E3V84_00510;product=SPFH domain-containing protein;protein_id=TMR48776.1;transl_table=11 SOQE01000005.1 Genbank gene 41408 42265 . + . ID=gene-E3V84_00515;Name=E3V84_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00515 SOQE01000005.1 Protein Homology CDS 41408 42265 . + 0 ID=cds-TMR48777.1;Parent=gene-E3V84_00515;Dbxref=NCBI_GP:TMR48777.1;Name=TMR48777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003004374.1;locus_tag=E3V84_00515;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=TMR48777.1;transl_table=11 SOQE01000005.1 Genbank gene 43350 44315 . - . ID=gene-E3V84_00520;Name=E3V84_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00520 SOQE01000005.1 Protein Homology CDS 43350 44315 . - 0 ID=cds-TMR48778.1;Parent=gene-E3V84_00520;Dbxref=NCBI_GP:TMR48778.1;Name=TMR48778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429453.1;locus_tag=E3V84_00520;product=DUF3644 domain-containing protein;protein_id=TMR48778.1;transl_table=11 SOQE01000005.1 Genbank gene 45240 46745 . - . ID=gene-E3V84_00525;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=E3V84_00525 SOQE01000005.1 Protein Homology CDS 45240 46745 . - 0 ID=cds-TMR48779.1;Parent=gene-E3V84_00525;Dbxref=NCBI_GP:TMR48779.1;Name=TMR48779.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447120.1;locus_tag=E3V84_00525;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=TMR48779.1;transl_table=11 SOQE01000005.1 Genbank gene 46755 47561 . - . ID=gene-E3V84_00530;Name=E3V84_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00530 SOQE01000005.1 Protein Homology CDS 46755 47561 . - 0 ID=cds-TMR48780.1;Parent=gene-E3V84_00530;Dbxref=NCBI_GP:TMR48780.1;Name=TMR48780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447121.1;locus_tag=E3V84_00530;product=metal ABC transporter permease;protein_id=TMR48780.1;transl_table=11 SOQE01000005.1 Genbank gene 47554 48258 . - . ID=gene-E3V84_00535;Name=E3V84_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00535 SOQE01000005.1 Protein Homology CDS 47554 48258 . - 0 ID=cds-TMR48781.1;Parent=gene-E3V84_00535;Dbxref=NCBI_GP:TMR48781.1;Name=TMR48781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359568.1;locus_tag=E3V84_00535;product=metal ABC transporter ATP-binding protein;protein_id=TMR48781.1;transl_table=11 SOQE01000005.1 Genbank gene 48258 48698 . - . ID=gene-E3V84_00540;Name=E3V84_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00540 SOQE01000005.1 Protein Homology CDS 48258 48698 . - 0 ID=cds-TMR48782.1;Parent=gene-E3V84_00540;Dbxref=NCBI_GP:TMR48782.1;Name=TMR48782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447123.1;locus_tag=E3V84_00540;product=MarR family transcriptional regulator;protein_id=TMR48782.1;transl_table=11 SOQE01000005.1 Genbank gene 48850 50118 . - . ID=gene-E3V84_00545;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=E3V84_00545 SOQE01000005.1 Protein Homology CDS 48850 50118 . - 0 ID=cds-TMR48783.1;Parent=gene-E3V84_00545;Dbxref=NCBI_GP:TMR48783.1;Name=TMR48783.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447124.1;locus_tag=E3V84_00545;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=TMR48783.1;transl_table=11 SOQE01000005.1 Genbank gene 50111 50350 . - . ID=gene-E3V84_00550;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=E3V84_00550 SOQE01000005.1 Protein Homology CDS 50111 50350 . - 0 ID=cds-TMR48784.1;Parent=gene-E3V84_00550;Dbxref=NCBI_GP:TMR48784.1;Name=TMR48784.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359571.1;locus_tag=E3V84_00550;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=TMR48784.1;transl_table=11 SOQE01000005.1 Genbank gene 50364 51608 . - . ID=gene-E3V84_00555;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=E3V84_00555 SOQE01000005.1 Protein Homology CDS 50364 51608 . - 0 ID=cds-TMR48785.1;Parent=gene-E3V84_00555;Dbxref=NCBI_GP:TMR48785.1;Name=TMR48785.1;gbkey=CDS;gene=dltB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447126.1;locus_tag=E3V84_00555;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=TMR48785.1;transl_table=11 SOQE01000005.1 Genbank gene 51605 53155 . - . ID=gene-E3V84_00560;Name=E3V84_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00560 SOQE01000005.1 Protein Homology CDS 51605 53155 . - 0 ID=cds-TMR48786.1;Parent=gene-E3V84_00560;Dbxref=NCBI_GP:TMR48786.1;Name=TMR48786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447127.1;locus_tag=E3V84_00560;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=TMR48786.1;transl_table=11 SOQE01000005.1 Genbank gene 53176 53307 . - . ID=gene-E3V84_00565;Name=E3V84_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00565 SOQE01000005.1 Protein Homology CDS 53176 53307 . - 0 ID=cds-TMR48787.1;Parent=gene-E3V84_00565;Dbxref=NCBI_GP:TMR48787.1;Name=TMR48787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036243.1;locus_tag=E3V84_00565;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=TMR48787.1;transl_table=11 SOQE01000005.1 Genbank gene 53468 53778 . + . ID=gene-E3V84_00570;Name=E3V84_00570;end_range=53778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00570;partial=true SOQE01000005.1 Protein Homology CDS 53468 53778 . + 0 ID=cds-TMR48788.1;Parent=gene-E3V84_00570;Dbxref=NCBI_GP:TMR48788.1;Name=TMR48788.1;end_range=53778,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_00570;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR48788.1;transl_table=11 ##sequence-region SOQE01000050.1 1 666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000050.1 Genbank region 1 666 . + . ID=SOQE01000050.1:1..666;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000050.1 Genbank pseudogene 1 143 . + . ID=gene-E3V84_05335;Name=E3V84_05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05335;pseudo=true SOQE01000050.1 Protein Homology CDS 1 143 . + 2 ID=cds-E3V84_05335;Parent=gene-E3V84_05335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_05335;product=ISNCY family transposase;pseudo=true;transl_table=11 SOQE01000050.1 Genbank pseudogene 248 652 . - . ID=gene-E3V84_05340;Name=E3V84_05340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05340;pseudo=true SOQE01000050.1 Protein Homology CDS 248 652 . - 0 ID=cds-E3V84_05340;Parent=gene-E3V84_05340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398343.1;locus_tag=E3V84_05340;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region SOQE01000051.1 1 20748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000051.1 Genbank region 1 20748 . + . ID=SOQE01000051.1:1..20748;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000051.1 Genbank gene 603 881 . - . ID=gene-E3V84_05345;Name=E3V84_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05345 SOQE01000051.1 Protein Homology CDS 603 881 . - 0 ID=cds-TMR46586.1;Parent=gene-E3V84_05345;Dbxref=NCBI_GP:TMR46586.1;Name=TMR46586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762786.1;locus_tag=E3V84_05345;product=hypothetical protein;protein_id=TMR46586.1;transl_table=11 SOQE01000051.1 Genbank pseudogene 866 1121 . - . ID=gene-E3V84_05350;Name=E3V84_05350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05350;pseudo=true SOQE01000051.1 Protein Homology CDS 866 1121 . - 0 ID=cds-E3V84_05350;Parent=gene-E3V84_05350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843963.1;locus_tag=E3V84_05350;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000051.1 Genbank gene 1868 2293 . - . ID=gene-E3V84_05355;Name=E3V84_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05355 SOQE01000051.1 Protein Homology CDS 1868 2293 . - 0 ID=cds-TMR46587.1;Parent=gene-E3V84_05355;Dbxref=NCBI_GP:TMR46587.1;Name=TMR46587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204059.1;locus_tag=E3V84_05355;product=hypothetical protein;protein_id=TMR46587.1;transl_table=11 SOQE01000051.1 Genbank gene 2286 2900 . - . ID=gene-E3V84_05360;Name=E3V84_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05360 SOQE01000051.1 Protein Homology CDS 2286 2900 . - 0 ID=cds-TMR46605.1;Parent=gene-E3V84_05360;Dbxref=NCBI_GP:TMR46605.1;Name=TMR46605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236771.1;locus_tag=E3V84_05360;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR46605.1;transl_table=11 SOQE01000051.1 Genbank gene 3045 3389 . - . ID=gene-E3V84_05365;Name=E3V84_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05365 SOQE01000051.1 Protein Homology CDS 3045 3389 . - 0 ID=cds-TMR46588.1;Parent=gene-E3V84_05365;Dbxref=NCBI_GP:TMR46588.1;Name=TMR46588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056000.1;locus_tag=E3V84_05365;product=XRE family transcriptional regulator;protein_id=TMR46588.1;transl_table=11 SOQE01000051.1 Genbank gene 3760 4710 . - . ID=gene-E3V84_05370;Name=E3V84_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05370 SOQE01000051.1 Protein Homology CDS 3760 4710 . - 0 ID=cds-TMR46589.1;Parent=gene-E3V84_05370;Dbxref=NCBI_GP:TMR46589.1;Name=TMR46589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=E3V84_05370;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR46589.1;transl_table=11 SOQE01000051.1 Genbank gene 5085 6455 . - . ID=gene-E3V84_05375;Name=E3V84_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05375 SOQE01000051.1 Protein Homology CDS 5085 6455 . - 0 ID=cds-TMR46590.1;Parent=gene-E3V84_05375;Dbxref=NCBI_GP:TMR46590.1;Name=TMR46590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446938.1;locus_tag=E3V84_05375;product=MATE family efflux transporter;protein_id=TMR46590.1;transl_table=11 SOQE01000051.1 Genbank gene 6570 7736 . - . ID=gene-E3V84_05380;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=E3V84_05380 SOQE01000051.1 Protein Homology CDS 6570 7736 . - 0 ID=cds-TMR46591.1;Parent=gene-E3V84_05380;Dbxref=NCBI_GP:TMR46591.1;Name=TMR46591.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359349.1;locus_tag=E3V84_05380;product=recombinase RecA;protein_id=TMR46591.1;transl_table=11 SOQE01000051.1 Genbank gene 7791 9047 . - . ID=gene-E3V84_05385;Name=E3V84_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05385 SOQE01000051.1 Protein Homology CDS 7791 9047 . - 0 ID=cds-TMR46592.1;Parent=gene-E3V84_05385;Dbxref=NCBI_GP:TMR46592.1;Name=TMR46592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446940.1;locus_tag=E3V84_05385;product=competence/damage-inducible protein A;protein_id=TMR46592.1;transl_table=11 SOQE01000051.1 Genbank gene 9131 10147 . - . ID=gene-E3V84_05390;Name=E3V84_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05390 SOQE01000051.1 Protein Homology CDS 9131 10147 . - 0 ID=cds-TMR46593.1;Parent=gene-E3V84_05390;Dbxref=NCBI_GP:TMR46593.1;Name=TMR46593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359351.1;locus_tag=E3V84_05390;product=LytR family transcriptional regulator;protein_id=TMR46593.1;transl_table=11 SOQE01000051.1 Genbank gene 10155 10673 . - . ID=gene-E3V84_05395;Name=E3V84_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05395 SOQE01000051.1 Protein Homology CDS 10155 10673 . - 0 ID=cds-TMR46594.1;Parent=gene-E3V84_05395;Dbxref=NCBI_GP:TMR46594.1;Name=TMR46594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446942.1;locus_tag=E3V84_05395;product=GNAT family N-acetyltransferase;protein_id=TMR46594.1;transl_table=11 SOQE01000051.1 Genbank gene 10663 11106 . - . ID=gene-E3V84_05400;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=E3V84_05400 SOQE01000051.1 Protein Homology CDS 10663 11106 . - 0 ID=cds-TMR46595.1;Parent=gene-E3V84_05400;Dbxref=NCBI_GP:TMR46595.1;Name=TMR46595.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446943.1;locus_tag=E3V84_05400;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=TMR46595.1;transl_table=11 SOQE01000051.1 Genbank gene 11185 11271 . - . ID=gene-E3V84_05405;Name=E3V84_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05405 SOQE01000051.1 Protein Homology CDS 11185 11271 . - 0 ID=cds-TMR46606.1;Parent=gene-E3V84_05405;Dbxref=NCBI_GP:TMR46606.1;Name=TMR46606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_05405;product=DNA alkylation repair protein;protein_id=TMR46606.1;transl_table=11 SOQE01000051.1 Genbank gene 11372 11764 . - . ID=gene-E3V84_05410;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=E3V84_05410 SOQE01000051.1 Protein Homology CDS 11372 11764 . - 0 ID=cds-TMR46596.1;Parent=gene-E3V84_05410;Dbxref=NCBI_GP:TMR46596.1;Name=TMR46596.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=E3V84_05410;product=30S ribosomal protein S9;protein_id=TMR46596.1;transl_table=11 SOQE01000051.1 Genbank gene 11784 12230 . - . ID=gene-E3V84_05415;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=E3V84_05415 SOQE01000051.1 Protein Homology CDS 11784 12230 . - 0 ID=cds-TMR46597.1;Parent=gene-E3V84_05415;Dbxref=NCBI_GP:TMR46597.1;Name=TMR46597.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357865.1;locus_tag=E3V84_05415;product=50S ribosomal protein L13;protein_id=TMR46597.1;transl_table=11 SOQE01000051.1 Genbank gene 12585 12902 . + . ID=gene-E3V84_05420;Name=E3V84_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05420 SOQE01000051.1 Protein Homology CDS 12585 12902 . + 0 ID=cds-TMR46598.1;Parent=gene-E3V84_05420;Dbxref=NCBI_GP:TMR46598.1;Name=TMR46598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445423.1;locus_tag=E3V84_05420;product=GTP cyclohydrolase;protein_id=TMR46598.1;transl_table=11 SOQE01000051.1 Genbank gene 13108 13920 . - . ID=gene-E3V84_05425;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=E3V84_05425 SOQE01000051.1 Protein Homology CDS 13108 13920 . - 0 ID=cds-TMR46599.1;Parent=gene-E3V84_05425;Dbxref=NCBI_GP:TMR46599.1;Name=TMR46599.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445422.1;locus_tag=E3V84_05425;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=TMR46599.1;transl_table=11 SOQE01000051.1 Genbank gene 14079 14633 . - . ID=gene-E3V84_05430;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=E3V84_05430 SOQE01000051.1 Protein Homology CDS 14079 14633 . - 0 ID=cds-TMR46607.1;Parent=gene-E3V84_05430;Dbxref=NCBI_GP:TMR46607.1;Name=TMR46607.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357862.1;locus_tag=E3V84_05430;product=GTP cyclohydrolase I FolE;protein_id=TMR46607.1;transl_table=11 SOQE01000051.1 Genbank gene 14614 15936 . - . ID=gene-E3V84_05435;Name=E3V84_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05435 SOQE01000051.1 Protein Homology CDS 14614 15936 . - 0 ID=cds-TMR46600.1;Parent=gene-E3V84_05435;Dbxref=NCBI_GP:TMR46600.1;Name=TMR46600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357861.1;locus_tag=E3V84_05435;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMR46600.1;transl_table=11 SOQE01000051.1 Genbank gene 15938 16882 . - . ID=gene-E3V84_05440;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=E3V84_05440 SOQE01000051.1 Protein Homology CDS 15938 16882 . - 0 ID=cds-TMR46608.1;Parent=gene-E3V84_05440;Dbxref=NCBI_GP:TMR46608.1;Name=TMR46608.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445419.1;locus_tag=E3V84_05440;product=dihydropteroate synthase;protein_id=TMR46608.1;transl_table=11 SOQE01000051.1 Genbank gene 17006 17716 . - . ID=gene-E3V84_05445;Name=E3V84_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05445 SOQE01000051.1 Protein Homology CDS 17006 17716 . - 0 ID=cds-TMR46601.1;Parent=gene-E3V84_05445;Dbxref=NCBI_GP:TMR46601.1;Name=TMR46601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445418.1;locus_tag=E3V84_05445;product=CPBP family intramembrane metalloprotease;protein_id=TMR46601.1;transl_table=11 SOQE01000051.1 Genbank gene 17766 19184 . - . ID=gene-E3V84_05450;Name=E3V84_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05450 SOQE01000051.1 Protein Homology CDS 17766 19184 . - 0 ID=cds-TMR46602.1;Parent=gene-E3V84_05450;Dbxref=NCBI_GP:TMR46602.1;Name=TMR46602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445417.1;locus_tag=E3V84_05450;product=NCS2 family permease;protein_id=TMR46602.1;transl_table=11 SOQE01000051.1 Genbank gene 19374 20186 . + . ID=gene-E3V84_05455;Name=E3V84_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05455 SOQE01000051.1 Protein Homology CDS 19374 20186 . + 0 ID=cds-TMR46603.1;Parent=gene-E3V84_05455;Dbxref=NCBI_GP:TMR46603.1;Name=TMR46603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357857.1;locus_tag=E3V84_05455;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR46603.1;transl_table=11 SOQE01000051.1 Genbank gene 20222 20314 . - . ID=gene-E3V84_05460;Name=E3V84_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05460 SOQE01000051.1 Protein Homology CDS 20222 20314 . - 0 ID=cds-TMR46609.1;Parent=gene-E3V84_05460;Dbxref=NCBI_GP:TMR46609.1;Name=TMR46609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_05460;product=DNA alkylation repair protein;protein_id=TMR46609.1;transl_table=11 SOQE01000051.1 Genbank gene 20366 20748 . - . ID=gene-E3V84_05465;Name=E3V84_05465;end_range=20748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05465;partial=true SOQE01000051.1 Protein Homology CDS 20366 20748 . - 2 ID=cds-TMR46604.1;Parent=gene-E3V84_05465;Dbxref=NCBI_GP:TMR46604.1;Name=TMR46604.1;end_range=20748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_05465;partial=true;product=IS630 family transposase;protein_id=TMR46604.1;transl_table=11 ##sequence-region SOQE01000052.1 1 10866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000052.1 Genbank region 1 10866 . + . ID=SOQE01000052.1:1..10866;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000052.1 Genbank gene 1 83 . - . ID=gene-E3V84_05470;Name=E3V84_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05470;partial=true;start_range=.,1 SOQE01000052.1 Protein Homology CDS 1 83 . - 0 ID=cds-TMR46383.1;Parent=gene-E3V84_05470;Dbxref=NCBI_GP:TMR46383.1;Name=TMR46383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445576.1;locus_tag=E3V84_05470;partial=true;product=DNA-binding protein;protein_id=TMR46383.1;start_range=.,1;transl_table=11 SOQE01000052.1 Genbank gene 80 340 . - . ID=gene-E3V84_05475;Name=E3V84_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05475 SOQE01000052.1 Protein Homology CDS 80 340 . - 0 ID=cds-TMR46360.1;Parent=gene-E3V84_05475;Dbxref=NCBI_GP:TMR46360.1;Name=TMR46360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=E3V84_05475;product=DUF1372 family protein;protein_id=TMR46360.1;transl_table=11 SOQE01000052.1 Genbank gene 498 803 . - . ID=gene-E3V84_05480;Name=E3V84_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05480 SOQE01000052.1 Protein Homology CDS 498 803 . - 0 ID=cds-TMR46361.1;Parent=gene-E3V84_05480;Dbxref=NCBI_GP:TMR46361.1;Name=TMR46361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875946.1;locus_tag=E3V84_05480;product=hypothetical protein;protein_id=TMR46361.1;transl_table=11 SOQE01000052.1 Genbank gene 793 984 . - . ID=gene-E3V84_05485;Name=E3V84_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05485 SOQE01000052.1 Protein Homology CDS 793 984 . - 0 ID=cds-TMR46362.1;Parent=gene-E3V84_05485;Dbxref=NCBI_GP:TMR46362.1;Name=TMR46362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105096.1;locus_tag=E3V84_05485;product=hypothetical protein;protein_id=TMR46362.1;transl_table=11 SOQE01000052.1 Genbank gene 971 1138 . - . ID=gene-E3V84_05490;Name=E3V84_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05490 SOQE01000052.1 Protein Homology CDS 971 1138 . - 0 ID=cds-TMR46363.1;Parent=gene-E3V84_05490;Dbxref=NCBI_GP:TMR46363.1;Name=TMR46363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=E3V84_05490;product=hypothetical protein;protein_id=TMR46363.1;transl_table=11 SOQE01000052.1 Genbank gene 1154 1549 . - . ID=gene-E3V84_05495;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=E3V84_05495 SOQE01000052.1 Protein Homology CDS 1154 1549 . - 0 ID=cds-TMR46364.1;Parent=gene-E3V84_05495;Dbxref=NCBI_GP:TMR46364.1;Name=TMR46364.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609556.1;locus_tag=E3V84_05495;product=single-stranded DNA-binding protein;protein_id=TMR46364.1;transl_table=11 SOQE01000052.1 Genbank gene 1648 1863 . - . ID=gene-E3V84_05500;Name=E3V84_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05500 SOQE01000052.1 Protein Homology CDS 1648 1863 . - 0 ID=cds-TMR46365.1;Parent=gene-E3V84_05500;Dbxref=NCBI_GP:TMR46365.1;Name=TMR46365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891963.1;locus_tag=E3V84_05500;product=hypothetical protein;protein_id=TMR46365.1;transl_table=11 SOQE01000052.1 Genbank gene 1863 2057 . - . ID=gene-E3V84_05505;Name=E3V84_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05505 SOQE01000052.1 Protein Homology CDS 1863 2057 . - 0 ID=cds-TMR46366.1;Parent=gene-E3V84_05505;Dbxref=NCBI_GP:TMR46366.1;Name=TMR46366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470305.1;locus_tag=E3V84_05505;product=hypothetical protein;protein_id=TMR46366.1;transl_table=11 SOQE01000052.1 Genbank gene 2072 2842 . - . ID=gene-E3V84_05510;Name=E3V84_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05510 SOQE01000052.1 Protein Homology CDS 2072 2842 . - 0 ID=cds-TMR46367.1;Parent=gene-E3V84_05510;Dbxref=NCBI_GP:TMR46367.1;Name=TMR46367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228202.1;locus_tag=E3V84_05510;product=DNA replication protein DnaC;protein_id=TMR46367.1;transl_table=11 SOQE01000052.1 Genbank gene 2982 3794 . - . ID=gene-E3V84_05515;Name=E3V84_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05515 SOQE01000052.1 Protein Homology CDS 2982 3794 . - 0 ID=cds-TMR46368.1;Parent=gene-E3V84_05515;Dbxref=NCBI_GP:TMR46368.1;Name=TMR46368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289771.1;locus_tag=E3V84_05515;product=DnaD domain protein;protein_id=TMR46368.1;transl_table=11 SOQE01000052.1 Genbank gene 3787 4083 . - . ID=gene-E3V84_05520;Name=E3V84_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05520 SOQE01000052.1 Protein Homology CDS 3787 4083 . - 0 ID=cds-TMR46369.1;Parent=gene-E3V84_05520;Dbxref=NCBI_GP:TMR46369.1;Name=TMR46369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001156935.1;locus_tag=E3V84_05520;product=hypothetical protein;protein_id=TMR46369.1;transl_table=11 SOQE01000052.1 Genbank gene 4096 4398 . - . ID=gene-E3V84_05525;Name=E3V84_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05525 SOQE01000052.1 Protein Homology CDS 4096 4398 . - 0 ID=cds-TMR46370.1;Parent=gene-E3V84_05525;Dbxref=NCBI_GP:TMR46370.1;Name=TMR46370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462832.1;locus_tag=E3V84_05525;product=hypothetical protein;protein_id=TMR46370.1;transl_table=11 SOQE01000052.1 Genbank gene 4409 5131 . - . ID=gene-E3V84_05530;Name=E3V84_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05530 SOQE01000052.1 Protein Homology CDS 4409 5131 . - 0 ID=cds-TMR46371.1;Parent=gene-E3V84_05530;Dbxref=NCBI_GP:TMR46371.1;Name=TMR46371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060361.1;locus_tag=E3V84_05530;product=hypothetical protein;protein_id=TMR46371.1;transl_table=11 SOQE01000052.1 Genbank gene 5143 5433 . - . ID=gene-E3V84_05535;Name=E3V84_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05535 SOQE01000052.1 Protein Homology CDS 5143 5433 . - 0 ID=cds-TMR46372.1;Parent=gene-E3V84_05535;Dbxref=NCBI_GP:TMR46372.1;Name=TMR46372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398534.1;locus_tag=E3V84_05535;product=hypothetical protein;protein_id=TMR46372.1;transl_table=11 SOQE01000052.1 Genbank gene 5799 6023 . + . ID=gene-E3V84_05540;Name=E3V84_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05540 SOQE01000052.1 Protein Homology CDS 5799 6023 . + 0 ID=cds-TMR46373.1;Parent=gene-E3V84_05540;Dbxref=NCBI_GP:TMR46373.1;Name=TMR46373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040988.1;locus_tag=E3V84_05540;product=hypothetical protein;protein_id=TMR46373.1;transl_table=11 SOQE01000052.1 Genbank gene 6155 6868 . - . ID=gene-E3V84_05545;Name=E3V84_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05545 SOQE01000052.1 Protein Homology CDS 6155 6868 . - 0 ID=cds-TMR46374.1;Parent=gene-E3V84_05545;Dbxref=NCBI_GP:TMR46374.1;Name=TMR46374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002355.1;locus_tag=E3V84_05545;product=hypothetical protein;protein_id=TMR46374.1;transl_table=11 SOQE01000052.1 Genbank gene 6987 7181 . + . ID=gene-E3V84_05550;Name=E3V84_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05550 SOQE01000052.1 GeneMarkS-2+ CDS 6987 7181 . + 0 ID=cds-TMR46375.1;Parent=gene-E3V84_05550;Dbxref=NCBI_GP:TMR46375.1;Name=TMR46375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_05550;product=hypothetical protein;protein_id=TMR46375.1;transl_table=11 SOQE01000052.1 Genbank gene 7400 7930 . + . ID=gene-E3V84_05555;Name=E3V84_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05555 SOQE01000052.1 Protein Homology CDS 7400 7930 . + 0 ID=cds-TMR46376.1;Parent=gene-E3V84_05555;Dbxref=NCBI_GP:TMR46376.1;Name=TMR46376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135684.1;locus_tag=E3V84_05555;product=hypothetical protein;protein_id=TMR46376.1;transl_table=11 SOQE01000052.1 Genbank gene 8129 8320 . - . ID=gene-E3V84_05560;Name=E3V84_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05560 SOQE01000052.1 Protein Homology CDS 8129 8320 . - 0 ID=cds-TMR46377.1;Parent=gene-E3V84_05560;Dbxref=NCBI_GP:TMR46377.1;Name=TMR46377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451679.1;locus_tag=E3V84_05560;product=hypothetical protein;protein_id=TMR46377.1;transl_table=11 SOQE01000052.1 Genbank gene 8330 8527 . - . ID=gene-E3V84_05565;Name=E3V84_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05565 SOQE01000052.1 Protein Homology CDS 8330 8527 . - 0 ID=cds-TMR46378.1;Parent=gene-E3V84_05565;Dbxref=NCBI_GP:TMR46378.1;Name=TMR46378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066214.1;locus_tag=E3V84_05565;product=hypothetical protein;protein_id=TMR46378.1;transl_table=11 SOQE01000052.1 Genbank gene 8539 8724 . - . ID=gene-E3V84_05570;Name=E3V84_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05570 SOQE01000052.1 Protein Homology CDS 8539 8724 . - 0 ID=cds-TMR46379.1;Parent=gene-E3V84_05570;Dbxref=NCBI_GP:TMR46379.1;Name=TMR46379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274132.1;locus_tag=E3V84_05570;product=XRE family transcriptional regulator;protein_id=TMR46379.1;transl_table=11 SOQE01000052.1 Genbank gene 8855 9043 . - . ID=gene-E3V84_05575;Name=E3V84_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05575 SOQE01000052.1 Protein Homology CDS 8855 9043 . - 0 ID=cds-TMR46380.1;Parent=gene-E3V84_05575;Dbxref=NCBI_GP:TMR46380.1;Name=TMR46380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481383.1;locus_tag=E3V84_05575;product=XRE family transcriptional regulator;protein_id=TMR46380.1;transl_table=11 SOQE01000052.1 Genbank gene 9649 10746 . + . ID=gene-E3V84_05580;Name=E3V84_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05580 SOQE01000052.1 Protein Homology CDS 9649 10746 . + 0 ID=cds-TMR46381.1;Parent=gene-E3V84_05580;Dbxref=NCBI_GP:TMR46381.1;Name=TMR46381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285164.1;locus_tag=E3V84_05580;product=helix-turn-helix domain-containing protein;protein_id=TMR46381.1;transl_table=11 SOQE01000052.1 Genbank gene 10747 10866 . + . ID=gene-E3V84_05585;Name=E3V84_05585;end_range=10866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05585;partial=true SOQE01000052.1 Protein Homology CDS 10747 10866 . + 0 ID=cds-TMR46382.1;Parent=gene-E3V84_05585;Dbxref=NCBI_GP:TMR46382.1;Name=TMR46382.1;end_range=10866,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=E3V84_05585;partial=true;product=growth inhibitor PemK;protein_id=TMR46382.1;transl_table=11 ##sequence-region SOQE01000053.1 1 11925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000053.1 Genbank region 1 11925 . + . ID=SOQE01000053.1:1..11925;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000053.1 Genbank gene 11 126 . + . ID=gene-E3V84_05590;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V84_05590 SOQE01000053.1 cmsearch rRNA 11 126 . + . ID=rna-E3V84_05590;Parent=gene-E3V84_05590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05590;product=5S ribosomal RNA SOQE01000053.1 cmsearch exon 11 126 . + . ID=exon-E3V84_05590-1;Parent=rna-E3V84_05590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05590;product=5S ribosomal RNA SOQE01000053.1 Genbank gene 132 205 . + . ID=gene-E3V84_05595;Name=E3V84_05595;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_05595 SOQE01000053.1 tRNAscan-SE tRNA 132 205 . + . ID=rna-E3V84_05595;Parent=gene-E3V84_05595;anticodon=(pos:166..168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_05595;product=tRNA-Asn SOQE01000053.1 tRNAscan-SE exon 132 205 . + . ID=exon-E3V84_05595-1;Parent=rna-E3V84_05595;anticodon=(pos:166..168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_05595;product=tRNA-Asn SOQE01000053.1 Genbank pseudogene 353 472 . - . ID=gene-E3V84_05600;Name=E3V84_05600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05600;pseudo=true SOQE01000053.1 Protein Homology CDS 353 472 . - 0 ID=cds-E3V84_05600;Parent=gene-E3V84_05600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=E3V84_05600;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQE01000053.1 Genbank gene 471 989 . - . ID=gene-E3V84_05605;Name=E3V84_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05605 SOQE01000053.1 Protein Homology CDS 471 989 . - 0 ID=cds-TMR46213.1;Parent=gene-E3V84_05605;Dbxref=NCBI_GP:TMR46213.1;Name=TMR46213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_05605;product=transposase;protein_id=TMR46213.1;transl_table=11 SOQE01000053.1 Genbank gene 976 1302 . - . ID=gene-E3V84_05610;Name=E3V84_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05610 SOQE01000053.1 Protein Homology CDS 976 1302 . - 0 ID=cds-TMR46214.1;Parent=gene-E3V84_05610;Dbxref=NCBI_GP:TMR46214.1;Name=TMR46214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=E3V84_05610;product=transposase;protein_id=TMR46214.1;transl_table=11 SOQE01000053.1 Genbank gene 1575 1811 . + . ID=gene-E3V84_05615;Name=E3V84_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05615 SOQE01000053.1 Protein Homology CDS 1575 1811 . + 0 ID=cds-TMR46215.1;Parent=gene-E3V84_05615;Dbxref=NCBI_GP:TMR46215.1;Name=TMR46215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445191.1;locus_tag=E3V84_05615;product=recombinase RecX;protein_id=TMR46215.1;transl_table=11 SOQE01000053.1 Genbank gene 2042 3328 . + . ID=gene-E3V84_05620;Name=E3V84_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05620 SOQE01000053.1 Protein Homology CDS 2042 3328 . + 0 ID=cds-TMR46225.1;Parent=gene-E3V84_05620;Dbxref=NCBI_GP:TMR46225.1;Name=TMR46225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357615.1;locus_tag=E3V84_05620;product=adenylosuccinate synthase;protein_id=TMR46225.1;transl_table=11 SOQE01000053.1 Genbank gene 3536 4003 . + . ID=gene-E3V84_05625;Name=E3V84_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05625 SOQE01000053.1 Protein Homology CDS 3536 4003 . + 0 ID=cds-TMR46216.1;Parent=gene-E3V84_05625;Dbxref=NCBI_GP:TMR46216.1;Name=TMR46216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357616.1;locus_tag=E3V84_05625;product=nucleoside deaminase;protein_id=TMR46216.1;transl_table=11 SOQE01000053.1 Genbank gene 4036 4133 . + . ID=gene-E3V84_05630;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=E3V84_05630 SOQE01000053.1 cmsearch SRP_RNA 4036 4133 . + . ID=rna-E3V84_05630;Parent=gene-E3V84_05630;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05630;product=signal recognition particle sRNA small type SOQE01000053.1 cmsearch exon 4036 4133 . + . ID=exon-E3V84_05630-1;Parent=rna-E3V84_05630;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_05630;product=signal recognition particle sRNA small type SOQE01000053.1 Genbank gene 4190 4633 . + . ID=gene-E3V84_05635;Name=E3V84_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05635 SOQE01000053.1 Protein Homology CDS 4190 4633 . + 0 ID=cds-TMR46217.1;Parent=gene-E3V84_05635;Dbxref=NCBI_GP:TMR46217.1;Name=TMR46217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445194.1;locus_tag=E3V84_05635;product=dUTP diphosphatase;protein_id=TMR46217.1;transl_table=11 SOQE01000053.1 Genbank gene 4572 5150 . + . ID=gene-E3V84_05640;Name=E3V84_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05640 SOQE01000053.1 Protein Homology CDS 4572 5150 . + 0 ID=cds-TMR46218.1;Parent=gene-E3V84_05640;Dbxref=NCBI_GP:TMR46218.1;Name=TMR46218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357618.1;locus_tag=E3V84_05640;product=histidine phosphatase family protein;protein_id=TMR46218.1;transl_table=11 SOQE01000053.1 Genbank gene 5164 6525 . + . ID=gene-E3V84_05645;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=E3V84_05645 SOQE01000053.1 Protein Homology CDS 5164 6525 . + 0 ID=cds-TMR46219.1;Parent=gene-E3V84_05645;Dbxref=NCBI_GP:TMR46219.1;Name=TMR46219.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155545.1;locus_tag=E3V84_05645;product=DNA repair protein RadA;protein_id=TMR46219.1;transl_table=11 SOQE01000053.1 Genbank gene 6529 7095 . + . ID=gene-E3V84_05650;Name=E3V84_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05650 SOQE01000053.1 Protein Homology CDS 6529 7095 . + 0 ID=cds-TMR46220.1;Parent=gene-E3V84_05650;Dbxref=NCBI_GP:TMR46220.1;Name=TMR46220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357620.1;locus_tag=E3V84_05650;product=carbonic anhydrase;protein_id=TMR46220.1;transl_table=11 SOQE01000053.1 Genbank gene 7120 7935 . + . ID=gene-E3V84_05655;Name=E3V84_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05655 SOQE01000053.1 Protein Homology CDS 7120 7935 . + 0 ID=cds-TMR46221.1;Parent=gene-E3V84_05655;Dbxref=NCBI_GP:TMR46221.1;Name=TMR46221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749763.1;locus_tag=E3V84_05655;product=PrsW family intramembrane metalloprotease;protein_id=TMR46221.1;transl_table=11 SOQE01000053.1 Genbank gene 8080 9048 . + . ID=gene-E3V84_05660;Name=E3V84_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05660 SOQE01000053.1 Protein Homology CDS 8080 9048 . + 0 ID=cds-TMR46222.1;Parent=gene-E3V84_05660;Dbxref=NCBI_GP:TMR46222.1;Name=TMR46222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445201.1;locus_tag=E3V84_05660;product=ribose-phosphate diphosphokinase;protein_id=TMR46222.1;transl_table=11 SOQE01000053.1 Genbank pseudogene 9105 9952 . - . ID=gene-E3V84_05665;Name=E3V84_05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05665;pseudo=true SOQE01000053.1 Protein Homology CDS 9105 9952 . - 0 ID=cds-E3V84_05665;Parent=gene-E3V84_05665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V84_05665;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000053.1 Genbank pseudogene 10242 10430 . - . ID=gene-E3V84_05670;Name=E3V84_05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05670;pseudo=true SOQE01000053.1 Protein Homology CDS 10242 10430 . - 0 ID=cds-E3V84_05670;Parent=gene-E3V84_05670;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818994.1;locus_tag=E3V84_05670;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000053.1 Genbank gene 10637 11035 . + . ID=gene-E3V84_05675;Name=E3V84_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05675 SOQE01000053.1 Protein Homology CDS 10637 11035 . + 0 ID=cds-TMR46223.1;Parent=gene-E3V84_05675;Dbxref=NCBI_GP:TMR46223.1;Name=TMR46223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357624.1;locus_tag=E3V84_05675;product=flagellar assembly protein H domain protein;protein_id=TMR46223.1;transl_table=11 SOQE01000053.1 Genbank pseudogene 11326 11729 . + . ID=gene-E3V84_05680;Name=E3V84_05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05680;pseudo=true SOQE01000053.1 Protein Homology CDS 11326 11729 . + 0 ID=cds-E3V84_05680;Parent=gene-E3V84_05680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386827.1;locus_tag=E3V84_05680;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000053.1 Genbank gene 11769 11925 . + . ID=gene-E3V84_05685;Name=E3V84_05685;end_range=11925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05685;partial=true SOQE01000053.1 Protein Homology CDS 11769 11925 . + 0 ID=cds-TMR46224.1;Parent=gene-E3V84_05685;Dbxref=NCBI_GP:TMR46224.1;Name=TMR46224.1;end_range=11925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_05685;partial=true;product=IS630 family transposase;protein_id=TMR46224.1;transl_table=11 ##sequence-region SOQE01000054.1 1 1319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000054.1 Genbank region 1 1319 . + . ID=SOQE01000054.1:1..1319;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000054.1 Genbank gene 1 487 . - . ID=gene-E3V84_05690;Name=E3V84_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05690;partial=true;start_range=.,1 SOQE01000054.1 Protein Homology CDS 1 487 . - 0 ID=cds-TMR46210.1;Parent=gene-E3V84_05690;Dbxref=NCBI_GP:TMR46210.1;Name=TMR46210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105679.1;locus_tag=E3V84_05690;partial=true;product=hypothetical protein;protein_id=TMR46210.1;start_range=.,1;transl_table=11 SOQE01000054.1 Genbank gene 484 690 . - . ID=gene-E3V84_05695;Name=E3V84_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05695 SOQE01000054.1 Protein Homology CDS 484 690 . - 0 ID=cds-TMR46211.1;Parent=gene-E3V84_05695;Dbxref=NCBI_GP:TMR46211.1;Name=TMR46211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368698.1;locus_tag=E3V84_05695;product=hypothetical protein;protein_id=TMR46211.1;transl_table=11 SOQE01000054.1 Genbank gene 683 1319 . - . ID=gene-E3V84_05700;Name=E3V84_05700;end_range=1319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05700;partial=true SOQE01000054.1 Protein Homology CDS 683 1319 . - 1 ID=cds-TMR46212.1;Parent=gene-E3V84_05700;Dbxref=NCBI_GP:TMR46212.1;Name=TMR46212.1;end_range=1319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015971691.1;locus_tag=E3V84_05700;partial=true;product=tail fiber domain-containing protein;protein_id=TMR46212.1;transl_table=11 ##sequence-region SOQE01000055.1 1 22978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000055.1 Genbank region 1 22978 . + . ID=SOQE01000055.1:1..22978;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000055.1 Genbank pseudogene 1 128 . - . ID=gene-E3V84_05705;Name=E3V84_05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05705;pseudo=true SOQE01000055.1 Protein Homology CDS 1 128 . - 0 ID=cds-E3V84_05705;Parent=gene-E3V84_05705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386634.1;locus_tag=E3V84_05705;product=transposase;pseudo=true;transl_table=11 SOQE01000055.1 Genbank gene 293 1024 . - . ID=gene-E3V84_05710;Name=E3V84_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05710 SOQE01000055.1 Protein Homology CDS 293 1024 . - 0 ID=cds-TMR46166.1;Parent=gene-E3V84_05710;Dbxref=NCBI_GP:TMR46166.1;Name=TMR46166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035477.1;locus_tag=E3V84_05710;product=cyclase family protein;protein_id=TMR46166.1;transl_table=11 SOQE01000055.1 Genbank gene 1279 1815 . + . ID=gene-E3V84_05715;Name=E3V84_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05715 SOQE01000055.1 Protein Homology CDS 1279 1815 . + 0 ID=cds-TMR46167.1;Parent=gene-E3V84_05715;Dbxref=NCBI_GP:TMR46167.1;Name=TMR46167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750390.1;locus_tag=E3V84_05715;product=BioY family transporter;protein_id=TMR46167.1;transl_table=11 SOQE01000055.1 Genbank pseudogene 2194 2730 . - . ID=gene-E3V84_05720;Name=E3V84_05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05720;pseudo=true SOQE01000055.1 Protein Homology CDS 2194 2730 . - 0 ID=cds-E3V84_05720;Parent=gene-E3V84_05720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445287.1;locus_tag=E3V84_05720;product=Rgg/GadR/MutR family transcriptional regulator;pseudo=true;transl_table=11 SOQE01000055.1 Genbank gene 2705 2839 . - . ID=gene-E3V84_05725;Name=E3V84_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05725 SOQE01000055.1 Protein Homology CDS 2705 2839 . - 0 ID=cds-TMR46168.1;Parent=gene-E3V84_05725;Dbxref=NCBI_GP:TMR46168.1;Name=TMR46168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445286.1;locus_tag=E3V84_05725;product=hypothetical protein;protein_id=TMR46168.1;transl_table=11 SOQE01000055.1 Genbank gene 2854 3195 . + . ID=gene-E3V84_05730;Name=E3V84_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05730 SOQE01000055.1 Protein Homology CDS 2854 3195 . + 0 ID=cds-TMR46169.1;Parent=gene-E3V84_05730;Dbxref=NCBI_GP:TMR46169.1;Name=TMR46169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359525.1;locus_tag=E3V84_05730;product=metal-sulfur cluster assembly factor;protein_id=TMR46169.1;transl_table=11 SOQE01000055.1 Genbank gene 3497 5200 . - . ID=gene-E3V84_05735;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=E3V84_05735 SOQE01000055.1 Protein Homology CDS 3497 5200 . - 0 ID=cds-TMR46170.1;Parent=gene-E3V84_05735;Dbxref=NCBI_GP:TMR46170.1;Name=TMR46170.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359526.1;locus_tag=E3V84_05735;product=dihydroxy-acid dehydratase;protein_id=TMR46170.1;transl_table=11 SOQE01000055.1 Genbank gene 5433 6365 . - . ID=gene-E3V84_05740;Name=E3V84_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05740 SOQE01000055.1 Protein Homology CDS 5433 6365 . - 0 ID=cds-TMR46171.1;Parent=gene-E3V84_05740;Dbxref=NCBI_GP:TMR46171.1;Name=TMR46171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445283.1;locus_tag=E3V84_05740;product=transketolase family protein;protein_id=TMR46171.1;transl_table=11 SOQE01000055.1 Genbank gene 6362 7219 . - . ID=gene-E3V84_05745;Name=E3V84_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05745 SOQE01000055.1 Protein Homology CDS 6362 7219 . - 0 ID=cds-TMR46172.1;Parent=gene-E3V84_05745;Dbxref=NCBI_GP:TMR46172.1;Name=TMR46172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445282.1;locus_tag=E3V84_05745;product=transketolase;protein_id=TMR46172.1;transl_table=11 SOQE01000055.1 Genbank gene 7223 8569 . - . ID=gene-E3V84_05750;Name=E3V84_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05750 SOQE01000055.1 Protein Homology CDS 7223 8569 . - 0 ID=cds-TMR46173.1;Parent=gene-E3V84_05750;Dbxref=NCBI_GP:TMR46173.1;Name=TMR46173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359529.1;locus_tag=E3V84_05750;product=PTS ascorbate transporter subunit IIC;protein_id=TMR46173.1;transl_table=11 SOQE01000055.1 Genbank gene 8582 8866 . - . ID=gene-E3V84_05755;Name=E3V84_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05755 SOQE01000055.1 Protein Homology CDS 8582 8866 . - 0 ID=cds-TMR46174.1;Parent=gene-E3V84_05755;Dbxref=NCBI_GP:TMR46174.1;Name=TMR46174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359530.1;locus_tag=E3V84_05755;product=PTS sugar transporter subunit IIB;protein_id=TMR46174.1;transl_table=11 SOQE01000055.1 Genbank gene 8870 10900 . - . ID=gene-E3V84_05760;Name=E3V84_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05760 SOQE01000055.1 Protein Homology CDS 8870 10900 . - 0 ID=cds-TMR46175.1;Parent=gene-E3V84_05760;Dbxref=NCBI_GP:TMR46175.1;Name=TMR46175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359531.1;locus_tag=E3V84_05760;product=BglG family transcription antiterminator;protein_id=TMR46175.1;transl_table=11 SOQE01000055.1 Genbank gene 11052 11231 . + . ID=gene-E3V84_05765;Name=E3V84_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05765 SOQE01000055.1 Protein Homology CDS 11052 11231 . + 0 ID=cds-TMR46176.1;Parent=gene-E3V84_05765;Dbxref=NCBI_GP:TMR46176.1;Name=TMR46176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285121.1;locus_tag=E3V84_05765;product=hypothetical protein;protein_id=TMR46176.1;transl_table=11 SOQE01000055.1 Genbank gene 11257 11433 . + . ID=gene-E3V84_05770;Name=E3V84_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05770 SOQE01000055.1 Protein Homology CDS 11257 11433 . + 0 ID=cds-TMR46185.1;Parent=gene-E3V84_05770;Dbxref=NCBI_GP:TMR46185.1;Name=TMR46185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359533.1;locus_tag=E3V84_05770;product=PTS ascorbate transporter subunit IIC;protein_id=TMR46185.1;transl_table=11 SOQE01000055.1 Genbank gene 11585 11767 . + . ID=gene-E3V84_05775;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=E3V84_05775 SOQE01000055.1 Protein Homology CDS 11585 11767 . + 0 ID=cds-TMR46177.1;Parent=gene-E3V84_05775;Dbxref=NCBI_GP:TMR46177.1;Name=TMR46177.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=E3V84_05775;product=50S ribosomal protein L32;protein_id=TMR46177.1;transl_table=11 SOQE01000055.1 Genbank gene 11783 11932 . + . ID=gene-E3V84_05780;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V84_05780 SOQE01000055.1 Protein Homology CDS 11783 11932 . + 0 ID=cds-TMR46178.1;Parent=gene-E3V84_05780;Dbxref=NCBI_GP:TMR46178.1;Name=TMR46178.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=E3V84_05780;product=50S ribosomal protein L33;protein_id=TMR46178.1;transl_table=11 SOQE01000055.1 Genbank gene 12455 13576 . + . ID=gene-E3V84_05785;Name=E3V84_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05785 SOQE01000055.1 Protein Homology CDS 12455 13576 . + 0 ID=cds-TMR46179.1;Parent=gene-E3V84_05785;Dbxref=NCBI_GP:TMR46179.1;Name=TMR46179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_689104.1;locus_tag=E3V84_05785;product=Fic family protein;protein_id=TMR46179.1;transl_table=11 SOQE01000055.1 Genbank gene 13922 15511 . - . ID=gene-E3V84_05790;Name=E3V84_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05790 SOQE01000055.1 Protein Homology CDS 13922 15511 . - 0 ID=cds-TMR46180.1;Parent=gene-E3V84_05790;Dbxref=NCBI_GP:TMR46180.1;Name=TMR46180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083785.1;locus_tag=E3V84_05790;product=type I restriction-modification system subunit M;protein_id=TMR46180.1;transl_table=11 SOQE01000055.1 Genbank gene 15684 16805 . - . ID=gene-E3V84_05795;Name=E3V84_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05795 SOQE01000055.1 Protein Homology CDS 15684 16805 . - 0 ID=cds-TMR46181.1;Parent=gene-E3V84_05795;Dbxref=NCBI_GP:TMR46181.1;Name=TMR46181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284838.1;locus_tag=E3V84_05795;product=restriction endonuclease subunit S;protein_id=TMR46181.1;transl_table=11 SOQE01000055.1 Genbank gene 16802 17869 . - . ID=gene-E3V84_05800;Name=E3V84_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05800 SOQE01000055.1 Protein Homology CDS 16802 17869 . - 0 ID=cds-TMR46182.1;Parent=gene-E3V84_05800;Dbxref=NCBI_GP:TMR46182.1;Name=TMR46182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429185.1;locus_tag=E3V84_05800;product=phage abortive infection protein;protein_id=TMR46182.1;transl_table=11 SOQE01000055.1 Genbank gene 18130 19371 . + . ID=gene-E3V84_05805;Name=E3V84_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05805 SOQE01000055.1 Protein Homology CDS 18130 19371 . + 0 ID=cds-TMR46183.1;Parent=gene-E3V84_05805;Dbxref=NCBI_GP:TMR46183.1;Name=TMR46183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109412.1;locus_tag=E3V84_05805;product=Fic family protein;protein_id=TMR46183.1;transl_table=11 SOQE01000055.1 Genbank gene 19525 22887 . - . ID=gene-E3V84_05810;Name=E3V84_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05810 SOQE01000055.1 Protein Homology CDS 19525 22887 . - 0 ID=cds-TMR46184.1;Parent=gene-E3V84_05810;Dbxref=NCBI_GP:TMR46184.1;Name=TMR46184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332005.1;locus_tag=E3V84_05810;product=type I restriction endonuclease subunit R;protein_id=TMR46184.1;transl_table=11 ##sequence-region SOQE01000056.1 1 19148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000056.1 Genbank region 1 19148 . + . ID=SOQE01000056.1:1..19148;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000056.1 Genbank gene 675 3011 . - . ID=gene-E3V84_05815;Name=E3V84_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05815 SOQE01000056.1 Protein Homology CDS 675 3011 . - 0 ID=cds-TMR46165.1;Parent=gene-E3V84_05815;Dbxref=NCBI_GP:TMR46165.1;Name=TMR46165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359057.1;locus_tag=E3V84_05815;product=HAD family hydrolase;protein_id=TMR46165.1;transl_table=11 SOQE01000056.1 Genbank gene 3144 3893 . + . ID=gene-E3V84_05820;Name=E3V84_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05820 SOQE01000056.1 Protein Homology CDS 3144 3893 . + 0 ID=cds-TMR46151.1;Parent=gene-E3V84_05820;Dbxref=NCBI_GP:TMR46151.1;Name=TMR46151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500208.1;locus_tag=E3V84_05820;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=TMR46151.1;transl_table=11 SOQE01000056.1 Genbank gene 4184 4798 . - . ID=gene-E3V84_05825;Name=E3V84_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05825 SOQE01000056.1 Protein Homology CDS 4184 4798 . - 0 ID=cds-TMR46152.1;Parent=gene-E3V84_05825;Dbxref=NCBI_GP:TMR46152.1;Name=TMR46152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359059.1;locus_tag=E3V84_05825;product=CadD family cadmium resistance transporter;protein_id=TMR46152.1;transl_table=11 SOQE01000056.1 Genbank gene 5613 5882 . - . ID=gene-E3V84_05830;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=E3V84_05830 SOQE01000056.1 Protein Homology CDS 5613 5882 . - 0 ID=cds-TMR46153.1;Parent=gene-E3V84_05830;Dbxref=NCBI_GP:TMR46153.1;Name=TMR46153.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=E3V84_05830;product=30S ribosomal protein S15;protein_id=TMR46153.1;transl_table=11 SOQE01000056.1 Genbank pseudogene 6335 6447 . + . ID=gene-E3V84_05835;Name=E3V84_05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05835;pseudo=true SOQE01000056.1 Protein Homology CDS 6335 6447 . + 0 ID=cds-E3V84_05835;Parent=gene-E3V84_05835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445771.1;locus_tag=E3V84_05835;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000056.1 Genbank pseudogene 6586 6683 . + . ID=gene-E3V84_05840;Name=E3V84_05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05840;pseudo=true SOQE01000056.1 Protein Homology CDS 6586 6683 . + 0 ID=cds-E3V84_05840;Parent=gene-E3V84_05840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035512.1;locus_tag=E3V84_05840;product=AAA family ATPase;pseudo=true;transl_table=11 SOQE01000056.1 Genbank gene 6769 8712 . + . ID=gene-E3V84_05845;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=E3V84_05845 SOQE01000056.1 Protein Homology CDS 6769 8712 . + 0 ID=cds-TMR46154.1;Parent=gene-E3V84_05845;Dbxref=NCBI_GP:TMR46154.1;Name=TMR46154.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359065.2;locus_tag=E3V84_05845;product=threonine--tRNA ligase;protein_id=TMR46154.1;transl_table=11 SOQE01000056.1 Genbank gene 8759 9733 . - . ID=gene-E3V84_05850;Name=E3V84_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05850 SOQE01000056.1 Protein Homology CDS 8759 9733 . - 0 ID=cds-TMR46155.1;Parent=gene-E3V84_05850;Dbxref=NCBI_GP:TMR46155.1;Name=TMR46155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445767.1;locus_tag=E3V84_05850;product=HAMP domain-containing histidine kinase;protein_id=TMR46155.1;transl_table=11 SOQE01000056.1 Genbank gene 9726 10403 . - . ID=gene-E3V84_05855;Name=E3V84_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05855 SOQE01000056.1 Protein Homology CDS 9726 10403 . - 0 ID=cds-TMR46156.1;Parent=gene-E3V84_05855;Dbxref=NCBI_GP:TMR46156.1;Name=TMR46156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445766.1;locus_tag=E3V84_05855;product=response regulator transcription factor;protein_id=TMR46156.1;transl_table=11 SOQE01000056.1 Genbank gene 10559 11632 . + . ID=gene-E3V84_05860;Name=E3V84_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05860 SOQE01000056.1 Protein Homology CDS 10559 11632 . + 0 ID=cds-TMR46157.1;Parent=gene-E3V84_05860;Dbxref=NCBI_GP:TMR46157.1;Name=TMR46157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445765.1;locus_tag=E3V84_05860;product=DUF2974 domain-containing protein;protein_id=TMR46157.1;transl_table=11 SOQE01000056.1 Genbank gene 11841 12278 . - . ID=gene-E3V84_05865;Name=E3V84_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05865 SOQE01000056.1 Protein Homology CDS 11841 12278 . - 0 ID=cds-TMR46158.1;Parent=gene-E3V84_05865;Dbxref=NCBI_GP:TMR46158.1;Name=TMR46158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359070.1;locus_tag=E3V84_05865;product=Rrf2 family transcriptional regulator;protein_id=TMR46158.1;transl_table=11 SOQE01000056.1 Genbank gene 12355 13203 . - . ID=gene-E3V84_05870;Name=E3V84_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05870 SOQE01000056.1 Protein Homology CDS 12355 13203 . - 0 ID=cds-TMR46159.1;Parent=gene-E3V84_05870;Dbxref=NCBI_GP:TMR46159.1;Name=TMR46159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445763.1;locus_tag=E3V84_05870;product=metallophosphoesterase;protein_id=TMR46159.1;transl_table=11 SOQE01000056.1 Genbank gene 13309 13959 . + . ID=gene-E3V84_05875;Name=E3V84_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05875 SOQE01000056.1 Protein Homology CDS 13309 13959 . + 0 ID=cds-TMR46160.1;Parent=gene-E3V84_05875;Dbxref=NCBI_GP:TMR46160.1;Name=TMR46160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359073.1;locus_tag=E3V84_05875;product=metal-dependent transcriptional regulator;protein_id=TMR46160.1;transl_table=11 SOQE01000056.1 Genbank gene 14124 14537 . + . ID=gene-E3V84_05880;Name=E3V84_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05880 SOQE01000056.1 Protein Homology CDS 14124 14537 . + 0 ID=cds-TMR46161.1;Parent=gene-E3V84_05880;Dbxref=NCBI_GP:TMR46161.1;Name=TMR46161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445761.1;locus_tag=E3V84_05880;product=hypothetical protein;protein_id=TMR46161.1;transl_table=11 SOQE01000056.1 Genbank gene 14576 15019 . - . ID=gene-E3V84_05885;Name=E3V84_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05885 SOQE01000056.1 Protein Homology CDS 14576 15019 . - 0 ID=cds-TMR46162.1;Parent=gene-E3V84_05885;Dbxref=NCBI_GP:TMR46162.1;Name=TMR46162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445760.1;locus_tag=E3V84_05885;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TMR46162.1;transl_table=11 SOQE01000056.1 Genbank gene 15049 17271 . - . ID=gene-E3V84_05890;Name=E3V84_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05890 SOQE01000056.1 Protein Homology CDS 15049 17271 . - 0 ID=cds-TMR46163.1;Parent=gene-E3V84_05890;Dbxref=NCBI_GP:TMR46163.1;Name=TMR46163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445759.1;locus_tag=E3V84_05890;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=TMR46163.1;transl_table=11 SOQE01000056.1 Genbank pseudogene 17562 17627 . + . ID=gene-E3V84_05895;Name=E3V84_05895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05895;pseudo=true SOQE01000056.1 Protein Homology CDS 17562 17627 . + 0 ID=cds-E3V84_05895;Parent=gene-E3V84_05895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V84_05895;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000056.1 Genbank gene 18189 18818 . + . ID=gene-E3V84_05900;Name=E3V84_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05900 SOQE01000056.1 Protein Homology CDS 18189 18818 . + 0 ID=cds-TMR46164.1;Parent=gene-E3V84_05900;Dbxref=NCBI_GP:TMR46164.1;Name=TMR46164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690864.1;locus_tag=E3V84_05900;product=MBL fold metallo-hydrolase;protein_id=TMR46164.1;transl_table=11 SOQE01000056.1 Genbank pseudogene 18866 18937 . + . ID=gene-E3V84_05905;Name=E3V84_05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05905;pseudo=true SOQE01000056.1 Protein Homology CDS 18866 18937 . + 0 ID=cds-E3V84_05905;Parent=gene-E3V84_05905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V84_05905;product=chlorohydrolase;pseudo=true;transl_table=11 ##sequence-region SOQE01000057.1 1 836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000057.1 Genbank region 1 836 . + . ID=SOQE01000057.1:1..836;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000057.1 Genbank gene 1 83 . + . ID=gene-E3V84_05910;Name=E3V84_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05910;partial=true;start_range=.,1 SOQE01000057.1 Protein Homology CDS 1 83 . + 2 ID=cds-TMR46104.1;Parent=gene-E3V84_05910;Dbxref=NCBI_GP:TMR46104.1;Name=TMR46104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834076.1;locus_tag=E3V84_05910;partial=true;product=restriction endonuclease subunit S;protein_id=TMR46104.1;start_range=.,1;transl_table=11 SOQE01000057.1 Genbank pseudogene 95 568 . + . ID=gene-E3V84_05915;Name=E3V84_05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05915;pseudo=true SOQE01000057.1 Protein Homology CDS 95 568 . + 0 ID=cds-E3V84_05915;Parent=gene-E3V84_05915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220760.1;locus_tag=E3V84_05915;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 ##sequence-region SOQE01000058.1 1 3473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000058.1 Genbank region 1 3473 . + . ID=SOQE01000058.1:1..3473;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000058.1 Genbank gene 1 767 . + . ID=gene-E3V84_05920;Name=E3V84_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05920;partial=true;start_range=.,1 SOQE01000058.1 Protein Homology CDS 1 767 . + 2 ID=cds-TMR46082.1;Parent=gene-E3V84_05920;Dbxref=NCBI_GP:TMR46082.1;Name=TMR46082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V84_05920;partial=true;product=IS66 family transposase;protein_id=TMR46082.1;start_range=.,1;transl_table=11 SOQE01000058.1 Genbank gene 1005 3473 . - . ID=gene-E3V84_05925;Name=E3V84_05925;end_range=3473,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05925;partial=true SOQE01000058.1 Protein Homology CDS 1005 3473 . - 0 ID=cds-TMR46083.1;Parent=gene-E3V84_05925;Dbxref=NCBI_GP:TMR46083.1;Name=TMR46083.1;end_range=3473,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19%2CHMM:PF08428.8;locus_tag=E3V84_05925;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR46083.1;transl_table=11 ##sequence-region SOQE01000059.1 1 891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000059.1 Genbank region 1 891 . + . ID=SOQE01000059.1:1..891;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000059.1 Genbank pseudogene 62 244 . - . ID=gene-E3V84_05930;Name=E3V84_05930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05930;pseudo=true SOQE01000059.1 Protein Homology CDS 62 244 . - 0 ID=cds-E3V84_05930;Parent=gene-E3V84_05930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284773.1;locus_tag=E3V84_05930;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000059.1 Genbank gene 226 891 . - . ID=gene-E3V84_05935;Name=E3V84_05935;end_range=891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05935;partial=true SOQE01000059.1 Protein Homology CDS 226 891 . - 0 ID=cds-TMR46080.1;Parent=gene-E3V84_05935;Dbxref=NCBI_GP:TMR46080.1;Name=TMR46080.1;end_range=891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398391.1;locus_tag=E3V84_05935;partial=true;product=ISNCY family transposase;protein_id=TMR46080.1;transl_table=11 ##sequence-region SOQE01000006.1 1 7809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000006.1 Genbank region 1 7809 . + . ID=SOQE01000006.1:1..7809;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000006.1 Genbank pseudogene 146 715 . + . ID=gene-E3V84_00575;Name=E3V84_00575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00575;pseudo=true SOQE01000006.1 Protein Homology CDS 146 715 . + 0 ID=cds-E3V84_00575;Parent=gene-E3V84_00575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473604.1;locus_tag=E3V84_00575;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQE01000006.1 Genbank gene 1455 3806 . + . ID=gene-E3V84_00580;Name=E3V84_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00580 SOQE01000006.1 Protein Homology CDS 1455 3806 . + 0 ID=cds-TMR48743.1;Parent=gene-E3V84_00580;Dbxref=NCBI_GP:TMR48743.1;Name=TMR48743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=E3V84_00580;product=hypothetical protein;protein_id=TMR48743.1;transl_table=11 SOQE01000006.1 Genbank gene 4118 4576 . + . ID=gene-E3V84_00585;Name=E3V84_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00585 SOQE01000006.1 Protein Homology CDS 4118 4576 . + 0 ID=cds-TMR48744.1;Parent=gene-E3V84_00585;Dbxref=NCBI_GP:TMR48744.1;Name=TMR48744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186958.1;locus_tag=E3V84_00585;product=DUF4231 domain-containing protein;protein_id=TMR48744.1;transl_table=11 SOQE01000006.1 Genbank gene 4589 5197 . + . ID=gene-E3V84_00590;Name=E3V84_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00590 SOQE01000006.1 Protein Homology CDS 4589 5197 . + 0 ID=cds-TMR48745.1;Parent=gene-E3V84_00590;Dbxref=NCBI_GP:TMR48745.1;Name=TMR48745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359333.1;locus_tag=E3V84_00590;product=hypothetical protein;protein_id=TMR48745.1;transl_table=11 SOQE01000006.1 Genbank gene 5190 5600 . + . ID=gene-E3V84_00595;Name=E3V84_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00595 SOQE01000006.1 Protein Homology CDS 5190 5600 . + 0 ID=cds-TMR48746.1;Parent=gene-E3V84_00595;Dbxref=NCBI_GP:TMR48746.1;Name=TMR48746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359332.1;locus_tag=E3V84_00595;product=hypothetical protein;protein_id=TMR48746.1;transl_table=11 SOQE01000006.1 Genbank gene 5611 7026 . + . ID=gene-E3V84_00600;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=E3V84_00600 SOQE01000006.1 Protein Homology CDS 5611 7026 . + 0 ID=cds-TMR48747.1;Parent=gene-E3V84_00600;Dbxref=NCBI_GP:TMR48747.1;Name=TMR48747.1;gbkey=CDS;gene=ply;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359331.1;locus_tag=E3V84_00600;product=cholesterol-dependent cytolysin pneumolysin;protein_id=TMR48747.1;transl_table=11 SOQE01000006.1 Genbank pseudogene 7235 7369 . - . ID=gene-E3V84_00605;Name=E3V84_00605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00605;pseudo=true SOQE01000006.1 Protein Homology CDS 7235 7369 . - 0 ID=cds-E3V84_00605;Parent=gene-E3V84_00605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820754.1;locus_tag=E3V84_00605;product=chlorohydrolase;pseudo=true;transl_table=11 ##sequence-region SOQE01000060.1 1 16013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000060.1 Genbank region 1 16013 . + . ID=SOQE01000060.1:1..16013;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000060.1 Genbank gene 251 1309 . + . ID=gene-E3V84_05940;Name=E3V84_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05940 SOQE01000060.1 Protein Homology CDS 251 1309 . + 0 ID=cds-TMR46038.1;Parent=gene-E3V84_05940;Dbxref=NCBI_GP:TMR46038.1;Name=TMR46038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447140.1;locus_tag=E3V84_05940;product=transcriptional regulator;protein_id=TMR46038.1;transl_table=11 SOQE01000060.1 Genbank gene 1319 2098 . + . ID=gene-E3V84_05945;Name=E3V84_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05945 SOQE01000060.1 Protein Homology CDS 1319 2098 . + 0 ID=cds-TMR46039.1;Parent=gene-E3V84_05945;Dbxref=NCBI_GP:TMR46039.1;Name=TMR46039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447139.1;locus_tag=E3V84_05945;product=nicotinamide riboside transporter PnuC;protein_id=TMR46039.1;transl_table=11 SOQE01000060.1 Genbank gene 2100 2870 . + . ID=gene-E3V84_05950;Name=E3V84_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05950 SOQE01000060.1 Protein Homology CDS 2100 2870 . + 0 ID=cds-TMR46040.1;Parent=gene-E3V84_05950;Dbxref=NCBI_GP:TMR46040.1;Name=TMR46040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447138.1;locus_tag=E3V84_05950;product=NUDIX hydrolase;protein_id=TMR46040.1;transl_table=11 SOQE01000060.1 Genbank pseudogene 2944 3173 . - . ID=gene-E3V84_05955;Name=E3V84_05955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_05955;pseudo=true SOQE01000060.1 Protein Homology CDS 2944 3173 . - 0 ID=cds-E3V84_05955;Parent=gene-E3V84_05955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933124.1;locus_tag=E3V84_05955;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000060.1 Genbank gene 3461 4159 . + . ID=gene-E3V84_05960;Name=E3V84_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05960 SOQE01000060.1 Protein Homology CDS 3461 4159 . + 0 ID=cds-TMR46041.1;Parent=gene-E3V84_05960;Dbxref=NCBI_GP:TMR46041.1;Name=TMR46041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447136.1;locus_tag=E3V84_05960;product=hypothetical protein;protein_id=TMR46041.1;transl_table=11 SOQE01000060.1 Genbank gene 4230 5240 . - . ID=gene-E3V84_05965;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=E3V84_05965 SOQE01000060.1 Protein Homology CDS 4230 5240 . - 0 ID=cds-TMR46042.1;Parent=gene-E3V84_05965;Dbxref=NCBI_GP:TMR46042.1;Name=TMR46042.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359585.1;locus_tag=E3V84_05965;product=tRNA dihydrouridine synthase DusB;protein_id=TMR46042.1;transl_table=11 SOQE01000060.1 Genbank gene 5197 6069 . - . ID=gene-E3V84_05970;Name=E3V84_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05970 SOQE01000060.1 Protein Homology CDS 5197 6069 . - 0 ID=cds-TMR46043.1;Parent=gene-E3V84_05970;Dbxref=NCBI_GP:TMR46043.1;Name=TMR46043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357853.1;locus_tag=E3V84_05970;product=Hsp33 family molecular chaperone HslO;protein_id=TMR46043.1;transl_table=11 SOQE01000060.1 Genbank gene 6234 7661 . + . ID=gene-E3V84_05975;Name=E3V84_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05975 SOQE01000060.1 Protein Homology CDS 6234 7661 . + 0 ID=cds-TMR46044.1;Parent=gene-E3V84_05975;Dbxref=NCBI_GP:TMR46044.1;Name=TMR46044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447132.1;locus_tag=E3V84_05975;product=hypothetical protein;protein_id=TMR46044.1;transl_table=11 SOQE01000060.1 Genbank gene 7795 9081 . - . ID=gene-E3V84_05980;Name=E3V84_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05980 SOQE01000060.1 Protein Homology CDS 7795 9081 . - 0 ID=cds-TMR46051.1;Parent=gene-E3V84_05980;Dbxref=NCBI_GP:TMR46051.1;Name=TMR46051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122618.1;locus_tag=E3V84_05980;product=hypothetical protein;protein_id=TMR46051.1;transl_table=11 SOQE01000060.1 Genbank gene 9094 10080 . - . ID=gene-E3V84_05985;Name=E3V84_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05985 SOQE01000060.1 Protein Homology CDS 9094 10080 . - 0 ID=cds-TMR46045.1;Parent=gene-E3V84_05985;Dbxref=NCBI_GP:TMR46045.1;Name=TMR46045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012766920.1;locus_tag=E3V84_05985;product=adenosine deaminase;protein_id=TMR46045.1;transl_table=11 SOQE01000060.1 Genbank gene 10085 10924 . - . ID=gene-E3V84_05990;Name=E3V84_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05990 SOQE01000060.1 Protein Homology CDS 10085 10924 . - 0 ID=cds-TMR46046.1;Parent=gene-E3V84_05990;Dbxref=NCBI_GP:TMR46046.1;Name=TMR46046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916653.1;locus_tag=E3V84_05990;product=restriction endonuclease;protein_id=TMR46046.1;transl_table=11 SOQE01000060.1 Genbank gene 11242 12750 . + . ID=gene-E3V84_05995;Name=E3V84_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_05995 SOQE01000060.1 Protein Homology CDS 11242 12750 . + 0 ID=cds-TMR46047.1;Parent=gene-E3V84_05995;Dbxref=NCBI_GP:TMR46047.1;Name=TMR46047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359582.1;locus_tag=E3V84_05995;product=glycerol kinase;protein_id=TMR46047.1;transl_table=11 SOQE01000060.1 Genbank gene 12792 14618 . + . ID=gene-E3V84_06000;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=E3V84_06000 SOQE01000060.1 Protein Homology CDS 12792 14618 . + 0 ID=cds-TMR46048.1;Parent=gene-E3V84_06000;Dbxref=NCBI_GP:TMR46048.1;Name=TMR46048.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447130.1;locus_tag=E3V84_06000;product=type 1 glycerol-3-phosphate oxidase;protein_id=TMR46048.1;transl_table=11 SOQE01000060.1 Genbank gene 14688 15392 . + . ID=gene-E3V84_06005;Name=E3V84_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06005 SOQE01000060.1 Protein Homology CDS 14688 15392 . + 0 ID=cds-TMR46049.1;Parent=gene-E3V84_06005;Dbxref=NCBI_GP:TMR46049.1;Name=TMR46049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359579.1;locus_tag=E3V84_06005;product=aquaporin family protein;protein_id=TMR46049.1;transl_table=11 SOQE01000060.1 Genbank gene 15588 16013 . - . ID=gene-E3V84_06010;Name=E3V84_06010;end_range=16013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06010;partial=true SOQE01000060.1 Protein Homology CDS 15588 16013 . - 0 ID=cds-TMR46050.1;Parent=gene-E3V84_06010;Dbxref=NCBI_GP:TMR46050.1;Name=TMR46050.1;end_range=16013,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_06010;partial=true;product=IS630 family transposase;protein_id=TMR46050.1;transl_table=11 ##sequence-region SOQE01000061.1 1 15525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000061.1 Genbank region 1 15525 . + . ID=SOQE01000061.1:1..15525;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000061.1 Genbank gene 1 157 . - . ID=gene-E3V84_06015;Name=E3V84_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06015;partial=true;start_range=.,1 SOQE01000061.1 Protein Homology CDS 1 157 . - 0 ID=cds-TMR46027.1;Parent=gene-E3V84_06015;Dbxref=NCBI_GP:TMR46027.1;Name=TMR46027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_06015;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR46027.1;start_range=.,1;transl_table=11 SOQE01000061.1 Genbank gene 242 1342 . - . ID=gene-E3V84_06020;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=E3V84_06020 SOQE01000061.1 Protein Homology CDS 242 1342 . - 0 ID=cds-TMR46028.1;Parent=gene-E3V84_06020;Dbxref=NCBI_GP:TMR46028.1;Name=TMR46028.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446859.1;locus_tag=E3V84_06020;product=UDP-galactopyranose mutase;protein_id=TMR46028.1;transl_table=11 SOQE01000061.1 Genbank pseudogene 1631 3582 . - . ID=gene-E3V84_06025;Name=E3V84_06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06025;pseudo=true SOQE01000061.1 Protein Homology CDS 1631 3582 . - 0 ID=cds-E3V84_06025;Parent=gene-E3V84_06025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093127.1;locus_tag=E3V84_06025;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQE01000061.1 Genbank gene 3778 5385 . - . ID=gene-E3V84_06030;Name=E3V84_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06030 SOQE01000061.1 Protein Homology CDS 3778 5385 . - 0 ID=cds-TMR46029.1;Parent=gene-E3V84_06030;Dbxref=NCBI_GP:TMR46029.1;Name=TMR46029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357904.1;locus_tag=E3V84_06030;product=alpha-glucosidase;protein_id=TMR46029.1;transl_table=11 SOQE01000061.1 Genbank gene 5538 7022 . + . ID=gene-E3V84_06035;Name=E3V84_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06035 SOQE01000061.1 Protein Homology CDS 5538 7022 . + 0 ID=cds-TMR46030.1;Parent=gene-E3V84_06035;Dbxref=NCBI_GP:TMR46030.1;Name=TMR46030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446861.1;locus_tag=E3V84_06035;product=DUF1846 domain-containing protein;protein_id=TMR46030.1;transl_table=11 SOQE01000061.1 Genbank gene 7117 7599 . + . ID=gene-E3V84_06040;Name=E3V84_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06040 SOQE01000061.1 Protein Homology CDS 7117 7599 . + 0 ID=cds-TMR46031.1;Parent=gene-E3V84_06040;Dbxref=NCBI_GP:TMR46031.1;Name=TMR46031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446862.1;locus_tag=E3V84_06040;product=S-ribosylhomocysteine lyase;protein_id=TMR46031.1;transl_table=11 SOQE01000061.1 Genbank pseudogene 7697 7780 . - . ID=gene-E3V84_06045;Name=E3V84_06045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06045;pseudo=true SOQE01000061.1 Protein Homology CDS 7697 7780 . - 0 ID=cds-E3V84_06045;Parent=gene-E3V84_06045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_06045;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000061.1 Genbank gene 7767 9872 . - . ID=gene-E3V84_06050;Name=E3V84_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06050 SOQE01000061.1 Protein Homology CDS 7767 9872 . - 0 ID=cds-TMR46032.1;Parent=gene-E3V84_06050;Dbxref=NCBI_GP:TMR46032.1;Name=TMR46032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446864.1;locus_tag=E3V84_06050;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR46032.1;transl_table=11 SOQE01000061.1 Genbank gene 10314 11294 . - . ID=gene-E3V84_06055;Name=E3V84_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06055 SOQE01000061.1 Protein Homology CDS 10314 11294 . - 0 ID=cds-TMR46033.1;Parent=gene-E3V84_06055;Dbxref=NCBI_GP:TMR46033.1;Name=TMR46033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357899.1;locus_tag=E3V84_06055;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=TMR46033.1;transl_table=11 SOQE01000061.1 Genbank gene 11296 13548 . - . ID=gene-E3V84_06060;Name=E3V84_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06060 SOQE01000061.1 Protein Homology CDS 11296 13548 . - 0 ID=cds-TMR46034.1;Parent=gene-E3V84_06060;Dbxref=NCBI_GP:TMR46034.1;Name=TMR46034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357898.1;locus_tag=E3V84_06060;product=PASTA domain-containing protein;protein_id=TMR46034.1;transl_table=11 SOQE01000061.1 Genbank gene 13552 13869 . - . ID=gene-E3V84_06065;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=E3V84_06065 SOQE01000061.1 Protein Homology CDS 13552 13869 . - 0 ID=cds-TMR46036.1;Parent=gene-E3V84_06065;Dbxref=NCBI_GP:TMR46036.1;Name=TMR46036.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357897.1;locus_tag=E3V84_06065;product=cell division protein FtsL;protein_id=TMR46036.1;transl_table=11 SOQE01000061.1 Genbank gene 13881 14831 . - . ID=gene-E3V84_06070;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=E3V84_06070 SOQE01000061.1 Protein Homology CDS 13881 14831 . - 0 ID=cds-TMR46035.1;Parent=gene-E3V84_06070;Dbxref=NCBI_GP:TMR46035.1;Name=TMR46035.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446868.1;locus_tag=E3V84_06070;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=TMR46035.1;transl_table=11 SOQE01000061.1 Genbank pseudogene 14873 15525 . - . ID=gene-E3V84_06075;Name=E3V84_06075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06075;pseudo=true SOQE01000061.1 Protein Homology CDS 14873 15525 . - 2 ID=cds-E3V84_06075;Parent=gene-E3V84_06075;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_06075;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000062.1 1 12472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000062.1 Genbank region 1 12472 . + . ID=SOQE01000062.1:1..12472;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000062.1 Genbank gene 210 2168 . + . ID=gene-E3V84_06080;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=E3V84_06080 SOQE01000062.1 Protein Homology CDS 210 2168 . + 0 ID=cds-TMR46013.1;Parent=gene-E3V84_06080;Dbxref=NCBI_GP:TMR46013.1;Name=TMR46013.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446280.1;locus_tag=E3V84_06080;product=NAD-dependent DNA ligase LigA;protein_id=TMR46013.1;transl_table=11 SOQE01000062.1 Genbank gene 2171 3130 . + . ID=gene-E3V84_06085;Name=E3V84_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06085 SOQE01000062.1 Protein Homology CDS 2171 3130 . + 0 ID=cds-TMR46014.1;Parent=gene-E3V84_06085;Dbxref=NCBI_GP:TMR46014.1;Name=TMR46014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134183.1;locus_tag=E3V84_06085;product=YegS/Rv2252/BmrU family lipid kinase;protein_id=TMR46014.1;transl_table=11 SOQE01000062.1 Genbank gene 3153 5432 . + . ID=gene-E3V84_06090;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=E3V84_06090 SOQE01000062.1 Protein Homology CDS 3153 5432 . + 0 ID=cds-TMR46015.1;Parent=gene-E3V84_06090;Dbxref=NCBI_GP:TMR46015.1;Name=TMR46015.1;gbkey=CDS;gene=pulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358619.1;locus_tag=E3V84_06090;product=type I pullulanase;protein_id=TMR46015.1;transl_table=11 SOQE01000062.1 Genbank gene 5813 7741 . + . ID=gene-E3V84_06095;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=E3V84_06095 SOQE01000062.1 Protein Homology CDS 5813 7741 . + 0 ID=cds-TMR46016.1;Parent=gene-E3V84_06095;Dbxref=NCBI_GP:TMR46016.1;Name=TMR46016.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358623.1;locus_tag=E3V84_06095;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=TMR46016.1;transl_table=11 SOQE01000062.1 Genbank gene 7731 8873 . + . ID=gene-E3V84_06100;Name=E3V84_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06100 SOQE01000062.1 Protein Homology CDS 7731 8873 . + 0 ID=cds-TMR46017.1;Parent=gene-E3V84_06100;Dbxref=NCBI_GP:TMR46017.1;Name=TMR46017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358624.1;locus_tag=E3V84_06100;product=glucose-1-phosphate adenylyltransferase;protein_id=TMR46017.1;transl_table=11 SOQE01000062.1 Genbank gene 8863 10002 . + . ID=gene-E3V84_06105;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=E3V84_06105 SOQE01000062.1 Protein Homology CDS 8863 10002 . + 0 ID=cds-TMR46018.1;Parent=gene-E3V84_06105;Dbxref=NCBI_GP:TMR46018.1;Name=TMR46018.1;gbkey=CDS;gene=glgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358625.1;locus_tag=E3V84_06105;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=TMR46018.1;transl_table=11 SOQE01000062.1 Genbank gene 9999 11432 . + . ID=gene-E3V84_06110;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=E3V84_06110 SOQE01000062.1 Protein Homology CDS 9999 11432 . + 0 ID=cds-TMR46019.1;Parent=gene-E3V84_06110;Dbxref=NCBI_GP:TMR46019.1;Name=TMR46019.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446274.1;locus_tag=E3V84_06110;product=glycogen synthase GlgA;protein_id=TMR46019.1;transl_table=11 SOQE01000062.1 Genbank gene 11491 12135 . + . ID=gene-E3V84_06115;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=E3V84_06115 SOQE01000062.1 Protein Homology CDS 11491 12135 . + 0 ID=cds-TMR46020.1;Parent=gene-E3V84_06115;Dbxref=NCBI_GP:TMR46020.1;Name=TMR46020.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446273.1;locus_tag=E3V84_06115;product=phosphoserine phosphatase SerB;protein_id=TMR46020.1;transl_table=11 SOQE01000062.1 Genbank gene 12215 12469 . + . ID=gene-E3V84_06120;Name=E3V84_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06120 SOQE01000062.1 Protein Homology CDS 12215 12469 . + 0 ID=cds-TMR46021.1;Parent=gene-E3V84_06120;Dbxref=NCBI_GP:TMR46021.1;Name=TMR46021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_06120;product=helix-turn-helix domain-containing protein;protein_id=TMR46021.1;transl_table=11 ##sequence-region SOQE01000063.1 1 22634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000063.1 Genbank region 1 22634 . + . ID=SOQE01000063.1:1..22634;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000063.1 Genbank gene 1 61 . - . ID=gene-E3V84_06125;Name=E3V84_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06125;partial=true;start_range=.,1 SOQE01000063.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR45986.1;Parent=gene-E3V84_06125;Dbxref=NCBI_GP:TMR45986.1;Name=TMR45986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_06125;partial=true;product=IS200/IS605 family transposase;protein_id=TMR45986.1;start_range=.,1;transl_table=11 SOQE01000063.1 cmsearch riboswitch 251 469 . + . ID=id-SOQE01000063.1:251..469;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQE01000063.1 Genbank gene 634 1197 . + . ID=gene-E3V84_06130;Name=E3V84_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06130 SOQE01000063.1 Protein Homology CDS 634 1197 . + 0 ID=cds-TMR45970.1;Parent=gene-E3V84_06130;Dbxref=NCBI_GP:TMR45970.1;Name=TMR45970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446907.1;locus_tag=E3V84_06130;product=ECF transporter S component;protein_id=TMR45970.1;transl_table=11 SOQE01000063.1 Genbank gene 1187 1837 . + . ID=gene-E3V84_06135;Name=E3V84_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06135 SOQE01000063.1 Protein Homology CDS 1187 1837 . + 0 ID=cds-TMR45971.1;Parent=gene-E3V84_06135;Dbxref=NCBI_GP:TMR45971.1;Name=TMR45971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358028.1;locus_tag=E3V84_06135;product=phosphatase PAP2 family protein;protein_id=TMR45971.1;transl_table=11 SOQE01000063.1 Genbank gene 1949 2821 . + . ID=gene-E3V84_06140;Name=E3V84_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06140 SOQE01000063.1 Protein Homology CDS 1949 2821 . + 0 ID=cds-TMR45972.1;Parent=gene-E3V84_06140;Dbxref=NCBI_GP:TMR45972.1;Name=TMR45972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525616.1;locus_tag=E3V84_06140;product=XRE family transcriptional regulator;protein_id=TMR45972.1;transl_table=11 SOQE01000063.1 Genbank gene 3021 4241 . + . ID=gene-E3V84_06145;Name=E3V84_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06145 SOQE01000063.1 Protein Homology CDS 3021 4241 . + 0 ID=cds-TMR45973.1;Parent=gene-E3V84_06145;Dbxref=NCBI_GP:TMR45973.1;Name=TMR45973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091364.1;locus_tag=E3V84_06145;product=hypothetical protein;protein_id=TMR45973.1;transl_table=11 SOQE01000063.1 Genbank pseudogene 4259 4396 . + . ID=gene-E3V84_06150;Name=E3V84_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06150;pseudo=true SOQE01000063.1 Protein Homology CDS 4259 4396 . + 0 ID=cds-E3V84_06150;Parent=gene-E3V84_06150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358028.1;locus_tag=E3V84_06150;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 SOQE01000063.1 Genbank gene 4992 6149 . + . ID=gene-E3V84_06155;Name=E3V84_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06155 SOQE01000063.1 Protein Homology CDS 4992 6149 . + 0 ID=cds-TMR45974.1;Parent=gene-E3V84_06155;Dbxref=NCBI_GP:TMR45974.1;Name=TMR45974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285020.1;locus_tag=E3V84_06155;product=MFS transporter;protein_id=TMR45974.1;transl_table=11 SOQE01000063.1 Genbank pseudogene 6368 7090 . + . ID=gene-E3V84_06160;Name=E3V84_06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06160;pseudo=true SOQE01000063.1 Protein Homology CDS 6368 7090 . + 0 ID=cds-E3V84_06160;Parent=gene-E3V84_06160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=E3V84_06160;product=IS5 family transposase;pseudo=true;transl_table=11 SOQE01000063.1 Genbank pseudogene 7100 7222 . + . ID=gene-E3V84_06165;Name=E3V84_06165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06165;pseudo=true SOQE01000063.1 Protein Homology CDS 7100 7222 . + 0 ID=cds-E3V84_06165;Parent=gene-E3V84_06165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358029.1;locus_tag=E3V84_06165;product=chromosome partitioning protein ParB;pseudo=true;transl_table=11 SOQE01000063.1 Genbank gene 7227 7676 . + . ID=gene-E3V84_06170;Name=E3V84_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06170 SOQE01000063.1 Protein Homology CDS 7227 7676 . + 0 ID=cds-TMR45975.1;Parent=gene-E3V84_06170;Dbxref=NCBI_GP:TMR45975.1;Name=TMR45975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358030.1;locus_tag=E3V84_06170;product=GNAT family N-acetyltransferase;protein_id=TMR45975.1;transl_table=11 SOQE01000063.1 Genbank gene 7789 8391 . + . ID=gene-E3V84_06175;Name=E3V84_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06175 SOQE01000063.1 Protein Homology CDS 7789 8391 . + 0 ID=cds-TMR45976.1;Parent=gene-E3V84_06175;Dbxref=NCBI_GP:TMR45976.1;Name=TMR45976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445540.1;locus_tag=E3V84_06175;product=DNA-directed RNA polymerase subunit delta;protein_id=TMR45976.1;transl_table=11 SOQE01000063.1 Genbank gene 8781 10388 . + . ID=gene-E3V84_06180;Name=E3V84_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06180 SOQE01000063.1 Protein Homology CDS 8781 10388 . + 0 ID=cds-TMR45977.1;Parent=gene-E3V84_06180;Dbxref=NCBI_GP:TMR45977.1;Name=TMR45977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358032.1;locus_tag=E3V84_06180;product=CTP synthase;protein_id=TMR45977.1;transl_table=11 SOQE01000063.1 Genbank gene 10759 12390 . - . ID=gene-E3V84_06185;Name=E3V84_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06185 SOQE01000063.1 Protein Homology CDS 10759 12390 . - 0 ID=cds-TMR45978.1;Parent=gene-E3V84_06185;Dbxref=NCBI_GP:TMR45978.1;Name=TMR45978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358033.1;locus_tag=E3V84_06185;product=Na/Pi cotransporter family protein;protein_id=TMR45978.1;transl_table=11 SOQE01000063.1 Genbank gene 12688 17703 . + . ID=gene-E3V84_06190;Name=E3V84_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06190 SOQE01000063.1 Protein Homology CDS 12688 17703 . + 0 ID=cds-TMR45979.1;Parent=gene-E3V84_06190;Dbxref=NCBI_GP:TMR45979.1;Name=TMR45979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445484.1;locus_tag=E3V84_06190;product=YSIRK-type signal peptide-containing protein;protein_id=TMR45979.1;transl_table=11 SOQE01000063.1 Genbank gene 17793 18989 . + . ID=gene-E3V84_06195;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=E3V84_06195 SOQE01000063.1 Protein Homology CDS 17793 18989 . + 0 ID=cds-TMR45980.1;Parent=gene-E3V84_06195;Dbxref=NCBI_GP:TMR45980.1;Name=TMR45980.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=E3V84_06195;product=phosphoglycerate kinase;protein_id=TMR45980.1;transl_table=11 SOQE01000063.1 Genbank gene 19463 19990 . + . ID=gene-E3V84_06200;Name=E3V84_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06200 SOQE01000063.1 Protein Homology CDS 19463 19990 . + 0 ID=cds-TMR45981.1;Parent=gene-E3V84_06200;Dbxref=NCBI_GP:TMR45981.1;Name=TMR45981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445486.1;locus_tag=E3V84_06200;product=aromatic acid exporter family protein;protein_id=TMR45981.1;transl_table=11 SOQE01000063.1 Genbank gene 20067 20423 . + . ID=gene-E3V84_06205;Name=E3V84_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06205 SOQE01000063.1 Protein Homology CDS 20067 20423 . + 0 ID=cds-TMR45982.1;Parent=gene-E3V84_06205;Dbxref=NCBI_GP:TMR45982.1;Name=TMR45982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358037.1;locus_tag=E3V84_06205;product=MerR family transcriptional regulator;protein_id=TMR45982.1;transl_table=11 SOQE01000063.1 Genbank gene 20460 21806 . + . ID=gene-E3V84_06210;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=E3V84_06210 SOQE01000063.1 Protein Homology CDS 20460 21806 . + 0 ID=cds-TMR45983.1;Parent=gene-E3V84_06210;Dbxref=NCBI_GP:TMR45983.1;Name=TMR45983.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445488.1;locus_tag=E3V84_06210;product=type I glutamate--ammonia ligase;protein_id=TMR45983.1;transl_table=11 SOQE01000063.1 Genbank gene 21902 22021 . - . ID=gene-E3V84_06215;Name=E3V84_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06215 SOQE01000063.1 Protein Homology CDS 21902 22021 . - 0 ID=cds-TMR45984.1;Parent=gene-E3V84_06215;Dbxref=NCBI_GP:TMR45984.1;Name=TMR45984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808898.1;locus_tag=E3V84_06215;product=glutamine synthetase;protein_id=TMR45984.1;transl_table=11 SOQE01000063.1 Genbank gene 21986 22135 . + . ID=gene-E3V84_06220;Name=E3V84_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06220 SOQE01000063.1 Protein Homology CDS 21986 22135 . + 0 ID=cds-TMR45985.1;Parent=gene-E3V84_06220;Dbxref=NCBI_GP:TMR45985.1;Name=TMR45985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410533.1;locus_tag=E3V84_06220;product=cell envelope;protein_id=TMR45985.1;transl_table=11 SOQE01000063.1 Genbank pseudogene 22509 22634 . + . ID=gene-E3V84_06225;Name=E3V84_06225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06225;pseudo=true SOQE01000063.1 Protein Homology CDS 22509 22634 . + 0 ID=cds-E3V84_06225;Parent=gene-E3V84_06225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358042.1;locus_tag=E3V84_06225;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 ##sequence-region SOQE01000064.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000064.1 Genbank region 1 578 . + . ID=SOQE01000064.1:1..578;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000064.1 Genbank gene 67 540 . + . ID=gene-E3V84_06230;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=E3V84_06230 SOQE01000064.1 Protein Homology CDS 67 540 . + 0 ID=cds-TMR45969.1;Parent=gene-E3V84_06230;Dbxref=NCBI_GP:TMR45969.1;Name=TMR45969.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_06230;product=IS200/IS605 family transposase;protein_id=TMR45969.1;transl_table=11 ##sequence-region SOQE01000065.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000065.1 Genbank region 1 1212 . + . ID=SOQE01000065.1:1..1212;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000065.1 Genbank gene 1 260 . - . ID=gene-E3V84_06235;Name=E3V84_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06235;partial=true;start_range=.,1 SOQE01000065.1 Protein Homology CDS 1 260 . - 0 ID=cds-TMR45963.1;Parent=gene-E3V84_06235;Dbxref=NCBI_GP:TMR45963.1;Name=TMR45963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=E3V84_06235;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR45963.1;start_range=.,1;transl_table=11 SOQE01000065.1 Genbank pseudogene 295 789 . + . ID=gene-E3V84_06240;Name=E3V84_06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06240;pseudo=true SOQE01000065.1 Protein Homology CDS 295 789 . + 0 ID=cds-E3V84_06240;Parent=gene-E3V84_06240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_06240;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000065.1 Genbank gene 839 910 . + . ID=gene-E3V84_06245;Name=E3V84_06245;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06245 SOQE01000065.1 tRNAscan-SE tRNA 839 910 . + . ID=rna-E3V84_06245;Parent=gene-E3V84_06245;anticodon=(pos:872..874);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06245;product=tRNA-Glu SOQE01000065.1 tRNAscan-SE exon 839 910 . + . ID=exon-E3V84_06245-1;Parent=rna-E3V84_06245;anticodon=(pos:872..874);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06245;product=tRNA-Glu SOQE01000065.1 Genbank gene 1152 1212 . + . ID=gene-E3V84_06250;Name=E3V84_06250;end_range=1212,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V84_06250;partial=true SOQE01000065.1 Genbank rRNA 1152 1212 . + . ID=rna-E3V84_06250;Parent=gene-E3V84_06250;end_range=1212,.;gbkey=rRNA;locus_tag=E3V84_06250;partial=true;product=16S ribosomal RNA SOQE01000065.1 Genbank exon 1152 1212 . + . ID=exon-E3V84_06250-1;Parent=rna-E3V84_06250;end_range=1212,.;gbkey=rRNA;locus_tag=E3V84_06250;partial=true;product=16S ribosomal RNA ##sequence-region SOQE01000066.1 1 4199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000066.1 Genbank region 1 4199 . + . ID=SOQE01000066.1:1..4199;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000066.1 Genbank gene 240 410 . + . ID=gene-E3V84_06255;Name=E3V84_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06255 SOQE01000066.1 Protein Homology CDS 240 410 . + 0 ID=cds-TMR45958.1;Parent=gene-E3V84_06255;Dbxref=NCBI_GP:TMR45958.1;Name=TMR45958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359356.1;locus_tag=E3V84_06255;product=hypothetical protein;protein_id=TMR45958.1;transl_table=11 SOQE01000066.1 Genbank gene 575 868 . + . ID=gene-E3V84_06260;Name=E3V84_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06260 SOQE01000066.1 Protein Homology CDS 575 868 . + 0 ID=cds-TMR45959.1;Parent=gene-E3V84_06260;Dbxref=NCBI_GP:TMR45959.1;Name=TMR45959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748217.1;locus_tag=E3V84_06260;product=hypothetical protein;protein_id=TMR45959.1;transl_table=11 SOQE01000066.1 Genbank gene 875 3076 . + . ID=gene-E3V84_06265;Name=E3V84_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06265 SOQE01000066.1 Protein Homology CDS 875 3076 . + 0 ID=cds-TMR45960.1;Parent=gene-E3V84_06265;Dbxref=NCBI_GP:TMR45960.1;Name=TMR45960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221426.1;locus_tag=E3V84_06265;product=ABC transporter permease;protein_id=TMR45960.1;transl_table=11 SOQE01000066.1 Genbank gene 3081 3722 . + . ID=gene-E3V84_06270;Name=E3V84_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06270 SOQE01000066.1 Protein Homology CDS 3081 3722 . + 0 ID=cds-TMR45961.1;Parent=gene-E3V84_06270;Dbxref=NCBI_GP:TMR45961.1;Name=TMR45961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087002.1;locus_tag=E3V84_06270;product=ABC transporter ATP-binding protein;protein_id=TMR45961.1;transl_table=11 SOQE01000066.1 Genbank gene 3970 4199 . - . ID=gene-E3V84_06275;Name=E3V84_06275;end_range=4199,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06275;partial=true SOQE01000066.1 Protein Homology CDS 3970 4199 . - 2 ID=cds-TMR45962.1;Parent=gene-E3V84_06275;Dbxref=NCBI_GP:TMR45962.1;Name=TMR45962.1;end_range=4199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093621.1;locus_tag=E3V84_06275;partial=true;product=XRE family transcriptional regulator;protein_id=TMR45962.1;transl_table=11 ##sequence-region SOQE01000067.1 1 72504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000067.1 Genbank region 1 72504 . + . ID=SOQE01000067.1:1..72504;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000067.1 Genbank gene 182 2455 . + . ID=gene-E3V84_06280;Name=E3V84_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06280 SOQE01000067.1 Protein Homology CDS 182 2455 . + 0 ID=cds-TMR45663.1;Parent=gene-E3V84_06280;Dbxref=NCBI_GP:TMR45663.1;Name=TMR45663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446113.1;locus_tag=E3V84_06280;product=Xaa-Pro dipeptidyl-peptidase;protein_id=TMR45663.1;transl_table=11 SOQE01000067.1 Genbank gene 2472 2942 . + . ID=gene-E3V84_06285;Name=E3V84_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06285 SOQE01000067.1 Protein Homology CDS 2472 2942 . + 0 ID=cds-TMR45664.1;Parent=gene-E3V84_06285;Dbxref=NCBI_GP:TMR45664.1;Name=TMR45664.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358387.1;locus_tag=E3V84_06285;product=arginine repressor;protein_id=TMR45664.1;transl_table=11 SOQE01000067.1 Genbank gene 3475 6825 . - . ID=gene-E3V84_06290;Name=E3V84_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06290 SOQE01000067.1 Protein Homology CDS 3475 6825 . - 0 ID=cds-TMR45665.1;Parent=gene-E3V84_06290;Dbxref=NCBI_GP:TMR45665.1;Name=TMR45665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358386.1;locus_tag=E3V84_06290;product=DEAD/DEAH box helicase;protein_id=TMR45665.1;transl_table=11 SOQE01000067.1 Genbank gene 6855 7436 . - . ID=gene-E3V84_06295;Name=E3V84_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06295 SOQE01000067.1 Protein Homology CDS 6855 7436 . - 0 ID=cds-TMR45666.1;Parent=gene-E3V84_06295;Dbxref=NCBI_GP:TMR45666.1;Name=TMR45666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461386.1;locus_tag=E3V84_06295;product=restriction endonuclease subunit S;protein_id=TMR45666.1;transl_table=11 SOQE01000067.1 Genbank gene 7459 8424 . - . ID=gene-E3V84_06300;Name=E3V84_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06300 SOQE01000067.1 Protein Homology CDS 7459 8424 . - 0 ID=cds-TMR45667.1;Parent=gene-E3V84_06300;Dbxref=NCBI_GP:TMR45667.1;Name=TMR45667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444451.1;locus_tag=E3V84_06300;product=integrase;protein_id=TMR45667.1;transl_table=11 SOQE01000067.1 Genbank gene 8542 8955 . - . ID=gene-E3V84_06305;Name=E3V84_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06305 SOQE01000067.1 Protein Homology CDS 8542 8955 . - 0 ID=cds-TMR45668.1;Parent=gene-E3V84_06305;Dbxref=NCBI_GP:TMR45668.1;Name=TMR45668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158364.1;locus_tag=E3V84_06305;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=TMR45668.1;transl_table=11 SOQE01000067.1 Genbank gene 8952 9188 . - . ID=gene-E3V84_06310;Name=E3V84_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06310 SOQE01000067.1 Protein Homology CDS 8952 9188 . - 0 ID=cds-TMR45669.1;Parent=gene-E3V84_06310;Dbxref=NCBI_GP:TMR45669.1;Name=TMR45669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446198.1;locus_tag=E3V84_06310;product=AbrB family transcriptional regulator;protein_id=TMR45669.1;transl_table=11 SOQE01000067.1 Genbank gene 9248 10369 . - . ID=gene-E3V84_06315;Name=E3V84_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06315 SOQE01000067.1 Protein Homology CDS 9248 10369 . - 0 ID=cds-TMR45670.1;Parent=gene-E3V84_06315;Dbxref=NCBI_GP:TMR45670.1;Name=TMR45670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756162.1;locus_tag=E3V84_06315;product=restriction endonuclease subunit S;protein_id=TMR45670.1;transl_table=11 SOQE01000067.1 Genbank gene 10382 11875 . - . ID=gene-E3V84_06320;Name=E3V84_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06320 SOQE01000067.1 Protein Homology CDS 10382 11875 . - 0 ID=cds-TMR45671.1;Parent=gene-E3V84_06320;Dbxref=NCBI_GP:TMR45671.1;Name=TMR45671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358384.1;locus_tag=E3V84_06320;product=SAM-dependent DNA methyltransferase;protein_id=TMR45671.1;transl_table=11 SOQE01000067.1 Genbank gene 11964 12074 . - . ID=gene-E3V84_06325;Name=E3V84_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06325 SOQE01000067.1 Protein Homology CDS 11964 12074 . - 0 ID=cds-TMR45672.1;Parent=gene-E3V84_06325;Dbxref=NCBI_GP:TMR45672.1;Name=TMR45672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=E3V84_06325;product=lysyl-tRNA synthetase;protein_id=TMR45672.1;transl_table=11 SOQE01000067.1 Genbank gene 12519 13685 . - . ID=gene-E3V84_06330;Name=E3V84_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06330 SOQE01000067.1 Protein Homology CDS 12519 13685 . - 0 ID=cds-TMR45673.1;Parent=gene-E3V84_06330;Dbxref=NCBI_GP:TMR45673.1;Name=TMR45673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903581.1;locus_tag=E3V84_06330;product=ATP-grasp domain-containing protein;protein_id=TMR45673.1;transl_table=11 SOQE01000067.1 Genbank gene 13698 14438 . - . ID=gene-E3V84_06335;Name=E3V84_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06335 SOQE01000067.1 Protein Homology CDS 13698 14438 . - 0 ID=cds-TMR45674.1;Parent=gene-E3V84_06335;Dbxref=NCBI_GP:TMR45674.1;Name=TMR45674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446459.1;locus_tag=E3V84_06335;product=esterase;protein_id=TMR45674.1;transl_table=11 SOQE01000067.1 Genbank gene 14459 15283 . - . ID=gene-E3V84_06340;Name=E3V84_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06340 SOQE01000067.1 Protein Homology CDS 14459 15283 . - 0 ID=cds-TMR45675.1;Parent=gene-E3V84_06340;Dbxref=NCBI_GP:TMR45675.1;Name=TMR45675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446460.1;locus_tag=E3V84_06340;product=alpha/beta hydrolase;protein_id=TMR45675.1;transl_table=11 SOQE01000067.1 Genbank gene 15420 16634 . - . ID=gene-E3V84_06345;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=E3V84_06345 SOQE01000067.1 Protein Homology CDS 15420 16634 . - 0 ID=cds-TMR45676.1;Parent=gene-E3V84_06345;Dbxref=NCBI_GP:TMR45676.1;Name=TMR45676.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446461.1;locus_tag=E3V84_06345;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=TMR45676.1;transl_table=11 SOQE01000067.1 Genbank gene 16643 17785 . - . ID=gene-E3V84_06350;Name=E3V84_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06350 SOQE01000067.1 Protein Homology CDS 16643 17785 . - 0 ID=cds-TMR45677.1;Parent=gene-E3V84_06350;Dbxref=NCBI_GP:TMR45677.1;Name=TMR45677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446462.1;locus_tag=E3V84_06350;product=cysteine desulfurase;protein_id=TMR45677.1;transl_table=11 SOQE01000067.1 Genbank gene 17925 18350 . + . ID=gene-E3V84_06355;Name=E3V84_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06355 SOQE01000067.1 Protein Homology CDS 17925 18350 . + 0 ID=cds-TMR45678.1;Parent=gene-E3V84_06355;Dbxref=NCBI_GP:TMR45678.1;Name=TMR45678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073932.1;locus_tag=E3V84_06355;product=hypothetical protein;protein_id=TMR45678.1;transl_table=11 SOQE01000067.1 Genbank gene 18548 20851 . - . ID=gene-E3V84_06360;Name=E3V84_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06360 SOQE01000067.1 Protein Homology CDS 18548 20851 . - 0 ID=cds-TMR45679.1;Parent=gene-E3V84_06360;Dbxref=NCBI_GP:TMR45679.1;Name=TMR45679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446464.1;locus_tag=E3V84_06360;product=DNA translocase FtsK;protein_id=TMR45679.1;transl_table=11 SOQE01000067.1 Genbank gene 20940 22892 . - . ID=gene-E3V84_06365;Name=E3V84_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06365 SOQE01000067.1 Protein Homology CDS 20940 22892 . - 0 ID=cds-TMR45680.1;Parent=gene-E3V84_06365;Dbxref=NCBI_GP:TMR45680.1;Name=TMR45680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446465.1;locus_tag=E3V84_06365;product=PTS fructose transporter subunit IIC;protein_id=TMR45680.1;transl_table=11 SOQE01000067.1 Genbank gene 22889 23800 . - . ID=gene-E3V84_06370;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=E3V84_06370 SOQE01000067.1 Protein Homology CDS 22889 23800 . - 0 ID=cds-TMR45681.1;Parent=gene-E3V84_06370;Dbxref=NCBI_GP:TMR45681.1;Name=TMR45681.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358373.1;locus_tag=E3V84_06370;product=1-phosphofructokinase;protein_id=TMR45681.1;transl_table=11 SOQE01000067.1 Genbank gene 23797 24537 . - . ID=gene-E3V84_06375;Name=E3V84_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06375 SOQE01000067.1 Protein Homology CDS 23797 24537 . - 0 ID=cds-TMR45682.1;Parent=gene-E3V84_06375;Dbxref=NCBI_GP:TMR45682.1;Name=TMR45682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358372.1;locus_tag=E3V84_06375;product=DeoR/GlpR transcriptional regulator;protein_id=TMR45682.1;transl_table=11 SOQE01000067.1 Genbank gene 24699 24786 . + . ID=gene-E3V84_06380;Name=E3V84_06380;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06380 SOQE01000067.1 tRNAscan-SE tRNA 24699 24786 . + . ID=rna-E3V84_06380;Parent=gene-E3V84_06380;anticodon=(pos:24733..24735);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06380;product=tRNA-Ser SOQE01000067.1 tRNAscan-SE exon 24699 24786 . + . ID=exon-E3V84_06380-1;Parent=rna-E3V84_06380;anticodon=(pos:24733..24735);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06380;product=tRNA-Ser SOQE01000067.1 Genbank gene 25142 25606 . + . ID=gene-E3V84_06385;Name=E3V84_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06385 SOQE01000067.1 Protein Homology CDS 25142 25606 . + 0 ID=cds-TMR45683.1;Parent=gene-E3V84_06385;Dbxref=NCBI_GP:TMR45683.1;Name=TMR45683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049399.1;locus_tag=E3V84_06385;product=TM2 domain-containing protein;protein_id=TMR45683.1;transl_table=11 SOQE01000067.1 Genbank gene 25661 26131 . + . ID=gene-E3V84_06390;Name=E3V84_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06390 SOQE01000067.1 Protein Homology CDS 25661 26131 . + 0 ID=cds-TMR45684.1;Parent=gene-E3V84_06390;Dbxref=NCBI_GP:TMR45684.1;Name=TMR45684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740293.1;locus_tag=E3V84_06390;product=hypothetical protein;protein_id=TMR45684.1;transl_table=11 SOQE01000067.1 Genbank gene 26158 26934 . + . ID=gene-E3V84_06395;Name=E3V84_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06395 SOQE01000067.1 Protein Homology CDS 26158 26934 . + 0 ID=cds-TMR45685.1;Parent=gene-E3V84_06395;Dbxref=NCBI_GP:TMR45685.1;Name=TMR45685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739744.1;locus_tag=E3V84_06395;product=DUF1828 domain-containing protein;protein_id=TMR45685.1;transl_table=11 SOQE01000067.1 Genbank gene 27126 27473 . - . ID=gene-E3V84_06400;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=E3V84_06400 SOQE01000067.1 cmsearch tmRNA 27126 27473 . - . ID=rna-E3V84_06400;Parent=gene-E3V84_06400;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_06400;product=transfer-messenger RNA SOQE01000067.1 cmsearch exon 27126 27473 . - . ID=exon-E3V84_06400-1;Parent=rna-E3V84_06400;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_06400;product=transfer-messenger RNA SOQE01000067.1 Genbank gene 28120 29229 . - . ID=gene-E3V84_06405;Name=E3V84_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06405 SOQE01000067.1 Protein Homology CDS 28120 29229 . - 0 ID=cds-TMR45686.1;Parent=gene-E3V84_06405;Dbxref=NCBI_GP:TMR45686.1;Name=TMR45686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358371.1;locus_tag=E3V84_06405;product=AI-2E family transporter;protein_id=TMR45686.1;transl_table=11 SOQE01000067.1 Genbank gene 29332 30573 . + . ID=gene-E3V84_06410;Name=E3V84_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06410 SOQE01000067.1 Protein Homology CDS 29332 30573 . + 0 ID=cds-TMR45687.1;Parent=gene-E3V84_06410;Dbxref=NCBI_GP:TMR45687.1;Name=TMR45687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358370.1;locus_tag=E3V84_06410;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMR45687.1;transl_table=11 SOQE01000067.1 Genbank gene 30800 32212 . - . ID=gene-E3V84_06415;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=E3V84_06415 SOQE01000067.1 Protein Homology CDS 30800 32212 . - 0 ID=cds-TMR45723.1;Parent=gene-E3V84_06415;Dbxref=NCBI_GP:TMR45723.1;Name=TMR45723.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446031.1;locus_tag=E3V84_06415;product=Fe-S cluster assembly protein SufB;protein_id=TMR45723.1;transl_table=11 SOQE01000067.1 Genbank gene 32270 32710 . - . ID=gene-E3V84_06420;Name=E3V84_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06420 SOQE01000067.1 Protein Homology CDS 32270 32710 . - 0 ID=cds-TMR45688.1;Parent=gene-E3V84_06420;Dbxref=NCBI_GP:TMR45688.1;Name=TMR45688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358368.1;locus_tag=E3V84_06420;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=TMR45688.1;transl_table=11 SOQE01000067.1 Genbank gene 32697 33923 . - . ID=gene-E3V84_06425;Name=E3V84_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06425 SOQE01000067.1 Protein Homology CDS 32697 33923 . - 0 ID=cds-TMR45689.1;Parent=gene-E3V84_06425;Dbxref=NCBI_GP:TMR45689.1;Name=TMR45689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446029.1;locus_tag=E3V84_06425;product=cysteine desulfurase;protein_id=TMR45689.1;transl_table=11 SOQE01000067.1 Genbank gene 33934 35196 . - . ID=gene-E3V84_06430;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=E3V84_06430 SOQE01000067.1 Protein Homology CDS 33934 35196 . - 0 ID=cds-TMR45690.1;Parent=gene-E3V84_06430;Dbxref=NCBI_GP:TMR45690.1;Name=TMR45690.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446028.1;locus_tag=E3V84_06430;product=Fe-S cluster assembly protein SufD;protein_id=TMR45690.1;transl_table=11 SOQE01000067.1 Genbank gene 35224 35994 . - . ID=gene-E3V84_06435;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=E3V84_06435 SOQE01000067.1 Protein Homology CDS 35224 35994 . - 0 ID=cds-TMR45691.1;Parent=gene-E3V84_06435;Dbxref=NCBI_GP:TMR45691.1;Name=TMR45691.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446027.1;locus_tag=E3V84_06435;product=Fe-S cluster assembly ATPase SufC;protein_id=TMR45691.1;transl_table=11 SOQE01000067.1 Genbank gene 36095 36196 . - . ID=gene-E3V84_06440;Name=E3V84_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06440 SOQE01000067.1 Protein Homology CDS 36095 36196 . - 0 ID=cds-TMR45724.1;Parent=gene-E3V84_06440;Dbxref=NCBI_GP:TMR45724.1;Name=TMR45724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V84_06440;product=DNA alkylation repair protein;protein_id=TMR45724.1;transl_table=11 SOQE01000067.1 Genbank gene 36259 36453 . - . ID=gene-E3V84_06445;Name=E3V84_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06445 SOQE01000067.1 Protein Homology CDS 36259 36453 . - 0 ID=cds-TMR45692.1;Parent=gene-E3V84_06445;Dbxref=NCBI_GP:TMR45692.1;Name=TMR45692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358364.1;locus_tag=E3V84_06445;product=DUF3272 family protein;protein_id=TMR45692.1;transl_table=11 SOQE01000067.1 Genbank gene 36481 38136 . - . ID=gene-E3V84_06450;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=E3V84_06450 SOQE01000067.1 Protein Homology CDS 36481 38136 . - 0 ID=cds-TMR45693.1;Parent=gene-E3V84_06450;Dbxref=NCBI_GP:TMR45693.1;Name=TMR45693.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358363.1;locus_tag=E3V84_06450;product=DNA polymerase III subunit gamma/tau;protein_id=TMR45693.1;transl_table=11 SOQE01000067.1 Genbank gene 38136 38633 . - . ID=gene-E3V84_06455;Name=E3V84_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06455 SOQE01000067.1 Protein Homology CDS 38136 38633 . - 0 ID=cds-TMR45694.1;Parent=gene-E3V84_06455;Dbxref=NCBI_GP:TMR45694.1;Name=TMR45694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358362.1;locus_tag=E3V84_06455;product=GAF domain-containing protein;protein_id=TMR45694.1;transl_table=11 SOQE01000067.1 Genbank gene 38720 39922 . - . ID=gene-E3V84_06460;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=E3V84_06460 SOQE01000067.1 Protein Homology CDS 38720 39922 . - 0 ID=cds-TMR45695.1;Parent=gene-E3V84_06460;Dbxref=NCBI_GP:TMR45695.1;Name=TMR45695.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=E3V84_06460;product=30S ribosomal protein S1;protein_id=TMR45695.1;transl_table=11 SOQE01000067.1 Genbank gene 40084 40155 . - . ID=gene-E3V84_06465;Name=E3V84_06465;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06465 SOQE01000067.1 tRNAscan-SE tRNA 40084 40155 . - . ID=rna-E3V84_06465;Parent=gene-E3V84_06465;anticodon=(pos:complement(40121..40123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06465;product=tRNA-Gln SOQE01000067.1 tRNAscan-SE exon 40084 40155 . - . ID=exon-E3V84_06465-1;Parent=rna-E3V84_06465;anticodon=(pos:complement(40121..40123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06465;product=tRNA-Gln SOQE01000067.1 Genbank gene 40165 40245 . - . ID=gene-E3V84_06470;Name=E3V84_06470;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06470 SOQE01000067.1 tRNAscan-SE tRNA 40165 40245 . - . ID=rna-E3V84_06470;Parent=gene-E3V84_06470;anticodon=(pos:complement(40209..40211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06470;product=tRNA-Tyr SOQE01000067.1 tRNAscan-SE exon 40165 40245 . - . ID=exon-E3V84_06470-1;Parent=rna-E3V84_06470;anticodon=(pos:complement(40209..40211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06470;product=tRNA-Tyr SOQE01000067.1 Genbank gene 40295 40525 . - . ID=gene-E3V84_06475;Name=E3V84_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06475 SOQE01000067.1 Protein Homology CDS 40295 40525 . - 0 ID=cds-TMR45696.1;Parent=gene-E3V84_06475;Dbxref=NCBI_GP:TMR45696.1;Name=TMR45696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358357.1;locus_tag=E3V84_06475;product=DUF2969 domain-containing protein;protein_id=TMR45696.1;transl_table=11 SOQE01000067.1 Genbank gene 40693 41337 . - . ID=gene-E3V84_06480;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=E3V84_06480 SOQE01000067.1 Protein Homology CDS 40693 41337 . - 0 ID=cds-TMR45697.1;Parent=gene-E3V84_06480;Dbxref=NCBI_GP:TMR45697.1;Name=TMR45697.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358356.1;locus_tag=E3V84_06480;product=pyroglutamyl-peptidase I;protein_id=TMR45697.1;transl_table=11 SOQE01000067.1 Genbank gene 41352 42275 . - . ID=gene-E3V84_06485;Name=E3V84_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06485 SOQE01000067.1 Protein Homology CDS 41352 42275 . - 0 ID=cds-TMR45698.1;Parent=gene-E3V84_06485;Dbxref=NCBI_GP:TMR45698.1;Name=TMR45698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358355.1;locus_tag=E3V84_06485;product=DUF979 domain-containing protein;protein_id=TMR45698.1;transl_table=11 SOQE01000067.1 Genbank gene 42272 42982 . - . ID=gene-E3V84_06490;Name=E3V84_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06490 SOQE01000067.1 Protein Homology CDS 42272 42982 . - 0 ID=cds-TMR45699.1;Parent=gene-E3V84_06490;Dbxref=NCBI_GP:TMR45699.1;Name=TMR45699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358354.1;locus_tag=E3V84_06490;product=DUF969 domain-containing protein;protein_id=TMR45699.1;transl_table=11 SOQE01000067.1 Genbank gene 43026 44993 . - . ID=gene-E3V84_06495;Name=E3V84_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06495 SOQE01000067.1 Protein Homology CDS 43026 44993 . - 0 ID=cds-TMR45700.1;Parent=gene-E3V84_06495;Dbxref=NCBI_GP:TMR45700.1;Name=TMR45700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446021.1;locus_tag=E3V84_06495;product=peptide ABC transporter substrate-binding protein;protein_id=TMR45700.1;transl_table=11 SOQE01000067.1 Genbank gene 45016 46038 . - . ID=gene-E3V84_06500;Name=E3V84_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06500 SOQE01000067.1 Protein Homology CDS 45016 46038 . - 0 ID=cds-TMR45701.1;Parent=gene-E3V84_06500;Dbxref=NCBI_GP:TMR45701.1;Name=TMR45701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358352.1;locus_tag=E3V84_06500;product=branched-chain amino acid aminotransferase;protein_id=TMR45701.1;transl_table=11 SOQE01000067.1 Genbank gene 46170 48641 . - . ID=gene-E3V84_06505;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=E3V84_06505 SOQE01000067.1 Protein Homology CDS 46170 48641 . - 0 ID=cds-TMR45702.1;Parent=gene-E3V84_06505;Dbxref=NCBI_GP:TMR45702.1;Name=TMR45702.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446019.1;locus_tag=E3V84_06505;product=DNA topoisomerase IV subunit A;protein_id=TMR45702.1;transl_table=11 SOQE01000067.1 Genbank gene 48899 50068 . - . ID=gene-E3V84_06510;Name=E3V84_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06510 SOQE01000067.1 Protein Homology CDS 48899 50068 . - 0 ID=cds-TMR45703.1;Parent=gene-E3V84_06510;Dbxref=NCBI_GP:TMR45703.1;Name=TMR45703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148697.1;locus_tag=E3V84_06510;product=hypothetical protein;protein_id=TMR45703.1;transl_table=11 SOQE01000067.1 Genbank gene 50119 50946 . - . ID=gene-E3V84_06515;Name=ant(6);gbkey=Gene;gene=ant(6);gene_biotype=protein_coding;locus_tag=E3V84_06515 SOQE01000067.1 Protein Homology CDS 50119 50946 . - 0 ID=cds-TMR45704.1;Parent=gene-E3V84_06515;Dbxref=NCBI_GP:TMR45704.1;Name=TMR45704.1;gbkey=CDS;gene=ant(6);inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148702.1;locus_tag=E3V84_06515;product=aminoglycoside 6-adenylyltransferase;protein_id=TMR45704.1;transl_table=11 SOQE01000067.1 Genbank gene 51011 51613 . - . ID=gene-E3V84_06520;Name=E3V84_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06520 SOQE01000067.1 Protein Homology CDS 51011 51613 . - 0 ID=cds-TMR45705.1;Parent=gene-E3V84_06520;Dbxref=NCBI_GP:TMR45705.1;Name=TMR45705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002395946.1;locus_tag=E3V84_06520;product=cell filamentation protein Fic;protein_id=TMR45705.1;transl_table=11 SOQE01000067.1 Genbank gene 51626 51967 . - . ID=gene-E3V84_06525;Name=E3V84_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06525 SOQE01000067.1 Protein Homology CDS 51626 51967 . - 0 ID=cds-TMR45706.1;Parent=gene-E3V84_06525;Dbxref=NCBI_GP:TMR45706.1;Name=TMR45706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247490.1;locus_tag=E3V84_06525;product=hypothetical protein;protein_id=TMR45706.1;transl_table=11 SOQE01000067.1 Genbank gene 52117 53238 . - . ID=gene-E3V84_06530;Name=E3V84_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06530 SOQE01000067.1 Protein Homology CDS 52117 53238 . - 0 ID=cds-TMR45707.1;Parent=gene-E3V84_06530;Dbxref=NCBI_GP:TMR45707.1;Name=TMR45707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=E3V84_06530;product=restriction endonuclease subunit S;protein_id=TMR45707.1;transl_table=11 SOQE01000067.1 Genbank gene 53256 55283 . - . ID=gene-E3V84_06535;Name=E3V84_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06535 SOQE01000067.1 Protein Homology CDS 53256 55283 . - 0 ID=cds-TMR45725.1;Parent=gene-E3V84_06535;Dbxref=NCBI_GP:TMR45725.1;Name=TMR45725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014166.1;locus_tag=E3V84_06535;product=SAM-dependent DNA methyltransferase;protein_id=TMR45725.1;transl_table=11 SOQE01000067.1 Genbank gene 55298 57241 . - . ID=gene-E3V84_06540;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=E3V84_06540 SOQE01000067.1 Protein Homology CDS 55298 57241 . - 0 ID=cds-TMR45708.1;Parent=gene-E3V84_06540;Dbxref=NCBI_GP:TMR45708.1;Name=TMR45708.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358350.1;locus_tag=E3V84_06540;product=DNA topoisomerase IV subunit B;protein_id=TMR45708.1;transl_table=11 SOQE01000067.1 Genbank gene 57377 58018 . + . ID=gene-E3V84_06545;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=E3V84_06545 SOQE01000067.1 Protein Homology CDS 57377 58018 . + 0 ID=cds-TMR45709.1;Parent=gene-E3V84_06545;Dbxref=NCBI_GP:TMR45709.1;Name=TMR45709.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446011.1;locus_tag=E3V84_06545;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=TMR45709.1;transl_table=11 SOQE01000067.1 Genbank gene 58056 59012 . - . ID=gene-E3V84_06550;Name=E3V84_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06550 SOQE01000067.1 Protein Homology CDS 58056 59012 . - 0 ID=cds-TMR45710.1;Parent=gene-E3V84_06550;Dbxref=NCBI_GP:TMR45710.1;Name=TMR45710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446010.1;locus_tag=E3V84_06550;product=ABC transporter permease;protein_id=TMR45710.1;transl_table=11 SOQE01000067.1 Genbank gene 59015 60073 . - . ID=gene-E3V84_06555;Name=E3V84_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06555 SOQE01000067.1 Protein Homology CDS 59015 60073 . - 0 ID=cds-TMR45711.1;Parent=gene-E3V84_06555;Dbxref=NCBI_GP:TMR45711.1;Name=TMR45711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446009.1;locus_tag=E3V84_06555;product=ABC transporter permease;protein_id=TMR45711.1;transl_table=11 SOQE01000067.1 Genbank gene 60066 61601 . - . ID=gene-E3V84_06560;Name=E3V84_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06560 SOQE01000067.1 Protein Homology CDS 60066 61601 . - 0 ID=cds-TMR45712.1;Parent=gene-E3V84_06560;Dbxref=NCBI_GP:TMR45712.1;Name=TMR45712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446008.1;locus_tag=E3V84_06560;product=ABC transporter ATP-binding protein;protein_id=TMR45712.1;transl_table=11 SOQE01000067.1 Genbank gene 61745 62800 . - . ID=gene-E3V84_06565;Name=E3V84_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06565 SOQE01000067.1 Protein Homology CDS 61745 62800 . - 0 ID=cds-TMR45713.1;Parent=gene-E3V84_06565;Dbxref=NCBI_GP:TMR45713.1;Name=TMR45713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446007.1;locus_tag=E3V84_06565;product=BMP family ABC transporter substrate-binding protein;protein_id=TMR45713.1;transl_table=11 SOQE01000067.1 Genbank gene 62890 63279 . - . ID=gene-E3V84_06570;Name=E3V84_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06570 SOQE01000067.1 Protein Homology CDS 62890 63279 . - 0 ID=cds-TMR45714.1;Parent=gene-E3V84_06570;Dbxref=NCBI_GP:TMR45714.1;Name=TMR45714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358340.1;locus_tag=E3V84_06570;product=cytidine deaminase;protein_id=TMR45714.1;transl_table=11 SOQE01000067.1 Genbank gene 63266 63928 . - . ID=gene-E3V84_06575;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=E3V84_06575 SOQE01000067.1 Protein Homology CDS 63266 63928 . - 0 ID=cds-TMR45715.1;Parent=gene-E3V84_06575;Dbxref=NCBI_GP:TMR45715.1;Name=TMR45715.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358339.1;locus_tag=E3V84_06575;product=deoxyribose-phosphate aldolase;protein_id=TMR45715.1;transl_table=11 SOQE01000067.1 Genbank gene 63948 65225 . - . ID=gene-E3V84_06580;Name=E3V84_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06580 SOQE01000067.1 Protein Homology CDS 63948 65225 . - 0 ID=cds-TMR45716.1;Parent=gene-E3V84_06580;Dbxref=NCBI_GP:TMR45716.1;Name=TMR45716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446004.1;locus_tag=E3V84_06580;product=pyrimidine-nucleoside phosphorylase;protein_id=TMR45716.1;transl_table=11 SOQE01000067.1 Genbank gene 65222 65812 . - . ID=gene-E3V84_06585;Name=E3V84_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06585 SOQE01000067.1 Protein Homology CDS 65222 65812 . - 0 ID=cds-TMR45717.1;Parent=gene-E3V84_06585;Dbxref=NCBI_GP:TMR45717.1;Name=TMR45717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446003.1;locus_tag=E3V84_06585;product=class I SAM-dependent methyltransferase;protein_id=TMR45717.1;transl_table=11 SOQE01000067.1 Genbank gene 66021 66425 . - . ID=gene-E3V84_06590;Name=E3V84_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06590 SOQE01000067.1 Protein Homology CDS 66021 66425 . - 0 ID=cds-TMR45718.1;Parent=gene-E3V84_06590;Dbxref=NCBI_GP:TMR45718.1;Name=TMR45718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446000.1;locus_tag=E3V84_06590;product=hypothetical protein;protein_id=TMR45718.1;transl_table=11 SOQE01000067.1 Genbank gene 66625 67545 . + . ID=gene-E3V84_06595;Name=E3V84_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06595 SOQE01000067.1 Protein Homology CDS 66625 67545 . + 0 ID=cds-TMR45719.1;Parent=gene-E3V84_06595;Dbxref=NCBI_GP:TMR45719.1;Name=TMR45719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445999.1;locus_tag=E3V84_06595;product=type I pantothenate kinase;protein_id=TMR45719.1;transl_table=11 SOQE01000067.1 Genbank gene 67613 67849 . + . ID=gene-E3V84_06600;Name=E3V84_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06600 SOQE01000067.1 Protein Homology CDS 67613 67849 . + 0 ID=cds-TMR45720.1;Parent=gene-E3V84_06600;Dbxref=NCBI_GP:TMR45720.1;Name=TMR45720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358334.2;locus_tag=E3V84_06600;product=30S ribosomal protein S20;protein_id=TMR45720.1;transl_table=11 SOQE01000067.1 Genbank pseudogene 67902 68413 . + . ID=gene-E3V84_06605;Name=E3V84_06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06605;pseudo=true SOQE01000067.1 Protein Homology CDS 67902 68413 . + 0 ID=cds-E3V84_06605;Parent=gene-E3V84_06605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684224.1;locus_tag=E3V84_06605;product=DNA topology modulation protein;pseudo=true;transl_table=11 SOQE01000067.1 Genbank gene 68508 69218 . - . ID=gene-E3V84_06610;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=E3V84_06610 SOQE01000067.1 Protein Homology CDS 68508 69218 . - 0 ID=cds-TMR45721.1;Parent=gene-E3V84_06610;Dbxref=NCBI_GP:TMR45721.1;Name=TMR45721.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445995.1;locus_tag=E3V84_06610;product=purine-nucleoside phosphorylase;protein_id=TMR45721.1;transl_table=11 SOQE01000067.1 Genbank pseudogene 70089 70163 . - . ID=gene-E3V84_06615;Name=E3V84_06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06615;pseudo=true SOQE01000067.1 Protein Homology CDS 70089 70163 . - 0 ID=cds-E3V84_06615;Parent=gene-E3V84_06615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=E3V84_06615;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000067.1 Genbank pseudogene 70267 72045 . - . ID=gene-E3V84_06620;Name=E3V84_06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06620;pseudo=true SOQE01000067.1 Protein Homology CDS 70267 72045 . - 0 ID=cds-E3V84_06620;Parent=gene-E3V84_06620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690148.1;locus_tag=E3V84_06620;product=hemolysin;pseudo=true;transl_table=11 SOQE01000067.1 Genbank gene 72052 72504 . - . ID=gene-E3V84_06625;Name=E3V84_06625;end_range=72504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06625;partial=true SOQE01000067.1 Protein Homology CDS 72052 72504 . - 0 ID=cds-TMR45722.1;Parent=gene-E3V84_06625;Dbxref=NCBI_GP:TMR45722.1;Name=TMR45722.1;end_range=72504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_06625;partial=true;product=IS630 family transposase;protein_id=TMR45722.1;transl_table=11 ##sequence-region SOQE01000068.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000068.1 Genbank region 1 967 . + . ID=SOQE01000068.1:1..967;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000068.1 Genbank gene 90 410 . - . ID=gene-E3V84_06630;Name=E3V84_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06630 SOQE01000068.1 Protein Homology CDS 90 410 . - 0 ID=cds-TMR45659.1;Parent=gene-E3V84_06630;Dbxref=NCBI_GP:TMR45659.1;Name=TMR45659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381729.1;locus_tag=E3V84_06630;product=hypothetical protein;protein_id=TMR45659.1;transl_table=11 SOQE01000068.1 Genbank gene 515 967 . - . ID=gene-E3V84_06635;Name=E3V84_06635;end_range=967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06635;partial=true SOQE01000068.1 Protein Homology CDS 515 967 . - 0 ID=cds-TMR45660.1;Parent=gene-E3V84_06635;Dbxref=NCBI_GP:TMR45660.1;Name=TMR45660.1;end_range=967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_06635;partial=true;product=IS630 family transposase;protein_id=TMR45660.1;transl_table=11 ##sequence-region SOQE01000069.1 1 4740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000069.1 Genbank region 1 4740 . + . ID=SOQE01000069.1:1..4740;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000069.1 Genbank gene 1 61 . - . ID=gene-E3V84_06640;Name=E3V84_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06640;partial=true;start_range=.,1 SOQE01000069.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR45621.1;Parent=gene-E3V84_06640;Dbxref=NCBI_GP:TMR45621.1;Name=TMR45621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_06640;partial=true;product=IS200/IS605 family transposase;protein_id=TMR45621.1;start_range=.,1;transl_table=11 SOQE01000069.1 Genbank gene 283 1833 . - . ID=gene-E3V84_06645;Name=E3V84_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06645 SOQE01000069.1 Protein Homology CDS 283 1833 . - 0 ID=cds-TMR45615.1;Parent=gene-E3V84_06645;Dbxref=NCBI_GP:TMR45615.1;Name=TMR45615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446173.1;locus_tag=E3V84_06645;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=TMR45615.1;transl_table=11 SOQE01000069.1 Genbank gene 1849 2628 . - . ID=gene-E3V84_06650;Name=E3V84_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06650 SOQE01000069.1 Protein Homology CDS 1849 2628 . - 0 ID=cds-TMR45616.1;Parent=gene-E3V84_06650;Dbxref=NCBI_GP:TMR45616.1;Name=TMR45616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358638.1;locus_tag=E3V84_06650;product=ribonuclease HII;protein_id=TMR45616.1;transl_table=11 SOQE01000069.1 Genbank gene 2615 3466 . - . ID=gene-E3V84_06655;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=E3V84_06655 SOQE01000069.1 Protein Homology CDS 2615 3466 . - 0 ID=cds-TMR45617.1;Parent=gene-E3V84_06655;Dbxref=NCBI_GP:TMR45617.1;Name=TMR45617.1;gbkey=CDS;gene=ylqF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446175.1;locus_tag=E3V84_06655;product=ribosome biogenesis GTPase YlqF;protein_id=TMR45617.1;transl_table=11 SOQE01000069.1 Genbank pseudogene 3671 3748 . + . ID=gene-E3V84_06660;Name=E3V84_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06660;pseudo=true SOQE01000069.1 Protein Homology CDS 3671 3748 . + 0 ID=cds-E3V84_06660;Parent=gene-E3V84_06660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=E3V84_06660;product=cytidylate kinase;pseudo=true;transl_table=11 SOQE01000069.1 Genbank gene 3837 4187 . + . ID=gene-E3V84_06665;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=E3V84_06665 SOQE01000069.1 Protein Homology CDS 3837 4187 . + 0 ID=cds-TMR45618.1;Parent=gene-E3V84_06665;Dbxref=NCBI_GP:TMR45618.1;Name=TMR45618.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_06665;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR45618.1;transl_table=11 SOQE01000069.1 Genbank gene 4242 4448 . + . ID=gene-E3V84_06670;Name=E3V84_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06670 SOQE01000069.1 Protein Homology CDS 4242 4448 . + 0 ID=cds-TMR45619.1;Parent=gene-E3V84_06670;Dbxref=NCBI_GP:TMR45619.1;Name=TMR45619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=E3V84_06670;product=transposase;protein_id=TMR45619.1;transl_table=11 SOQE01000069.1 Genbank gene 4351 4740 . + . ID=gene-E3V84_06675;Name=E3V84_06675;end_range=4740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06675;partial=true SOQE01000069.1 Protein Homology CDS 4351 4740 . + 0 ID=cds-TMR45620.1;Parent=gene-E3V84_06675;Dbxref=NCBI_GP:TMR45620.1;Name=TMR45620.1;end_range=4740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=E3V84_06675;partial=true;product=transposase;protein_id=TMR45620.1;transl_table=11 ##sequence-region SOQE01000007.1 1 18438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000007.1 Genbank region 1 18438 . + . ID=SOQE01000007.1:1..18438;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000007.1 Genbank pseudogene 41 738 . + . ID=gene-E3V84_00610;Name=E3V84_00610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00610;pseudo=true SOQE01000007.1 Protein Homology CDS 41 738 . + 0 ID=cds-E3V84_00610;Parent=gene-E3V84_00610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00610;product=IS5 family transposase;pseudo=true;transl_table=11 SOQE01000007.1 Genbank pseudogene 841 948 . + . ID=gene-E3V84_00615;Name=E3V84_00615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00615;pseudo=true SOQE01000007.1 Protein Homology CDS 841 948 . + 0 ID=cds-E3V84_00615;Parent=gene-E3V84_00615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_00615;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQE01000007.1 Genbank pseudogene 963 1172 . - . ID=gene-E3V84_00620;Name=E3V84_00620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00620;pseudo=true SOQE01000007.1 Protein Homology CDS 963 1172 . - 0 ID=cds-E3V84_00620;Parent=gene-E3V84_00620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=E3V84_00620;product=site-specific recombinase;pseudo=true;transl_table=11 SOQE01000007.1 Genbank gene 1299 1673 . - . ID=gene-E3V84_00625;Name=E3V84_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00625 SOQE01000007.1 Protein Homology CDS 1299 1673 . - 0 ID=cds-TMR48617.1;Parent=gene-E3V84_00625;Dbxref=NCBI_GP:TMR48617.1;Name=TMR48617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446371.1;locus_tag=E3V84_00625;product=DUF86 domain-containing protein;protein_id=TMR48617.1;transl_table=11 SOQE01000007.1 Genbank gene 1654 1968 . - . ID=gene-E3V84_00630;Name=E3V84_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00630 SOQE01000007.1 Protein Homology CDS 1654 1968 . - 0 ID=cds-TMR48618.1;Parent=gene-E3V84_00630;Dbxref=NCBI_GP:TMR48618.1;Name=TMR48618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446372.1;locus_tag=E3V84_00630;product=nucleotidyltransferase domain-containing protein;protein_id=TMR48618.1;transl_table=11 SOQE01000007.1 Genbank gene 2014 2175 . - . ID=gene-E3V84_00635;Name=E3V84_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00635 SOQE01000007.1 Protein Homology CDS 2014 2175 . - 0 ID=cds-TMR48619.1;Parent=gene-E3V84_00635;Dbxref=NCBI_GP:TMR48619.1;Name=TMR48619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077978.1;locus_tag=E3V84_00635;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=TMR48619.1;transl_table=11 SOQE01000007.1 Genbank gene 2265 2642 . - . ID=gene-E3V84_00640;Name=E3V84_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00640 SOQE01000007.1 Protein Homology CDS 2265 2642 . - 0 ID=cds-TMR48620.1;Parent=gene-E3V84_00640;Dbxref=NCBI_GP:TMR48620.1;Name=TMR48620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002282907.1;locus_tag=E3V84_00640;product=HicB family protein;protein_id=TMR48620.1;transl_table=11 SOQE01000007.1 Genbank gene 2700 2888 . - . ID=gene-E3V84_00645;Name=E3V84_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00645 SOQE01000007.1 Protein Homology CDS 2700 2888 . - 0 ID=cds-TMR48621.1;Parent=gene-E3V84_00645;Dbxref=NCBI_GP:TMR48621.1;Name=TMR48621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003088683.1;locus_tag=E3V84_00645;product=type II toxin-antitoxin system HicA family toxin;protein_id=TMR48621.1;transl_table=11 SOQE01000007.1 Genbank gene 3161 3232 . - . ID=gene-E3V84_00650;Name=E3V84_00650;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_00650 SOQE01000007.1 tRNAscan-SE tRNA 3161 3232 . - . ID=rna-E3V84_00650;Parent=gene-E3V84_00650;anticodon=(pos:complement(3197..3199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_00650;product=tRNA-Arg SOQE01000007.1 tRNAscan-SE exon 3161 3232 . - . ID=exon-E3V84_00650-1;Parent=rna-E3V84_00650;anticodon=(pos:complement(3197..3199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_00650;product=tRNA-Arg SOQE01000007.1 Genbank gene 3273 3620 . - . ID=gene-E3V84_00655;Name=E3V84_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00655 SOQE01000007.1 Protein Homology CDS 3273 3620 . - 0 ID=cds-TMR48622.1;Parent=gene-E3V84_00655;Dbxref=NCBI_GP:TMR48622.1;Name=TMR48622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=E3V84_00655;product=50S ribosomal protein L19;protein_id=TMR48622.1;transl_table=11 SOQE01000007.1 Genbank gene 3739 4068 . - . ID=gene-E3V84_00660;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=E3V84_00660 SOQE01000007.1 Protein Homology CDS 3739 4068 . - 0 ID=cds-TMR48623.1;Parent=gene-E3V84_00660;Dbxref=NCBI_GP:TMR48623.1;Name=TMR48623.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446375.1;locus_tag=E3V84_00660;product=fluoride efflux transporter CrcB;protein_id=TMR48623.1;transl_table=11 SOQE01000007.1 Genbank gene 4062 4436 . - . ID=gene-E3V84_00665;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=E3V84_00665 SOQE01000007.1 Protein Homology CDS 4062 4436 . - 0 ID=cds-TMR48624.1;Parent=gene-E3V84_00665;Dbxref=NCBI_GP:TMR48624.1;Name=TMR48624.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358766.1;locus_tag=E3V84_00665;product=fluoride efflux transporter CrcB;protein_id=TMR48624.1;transl_table=11 SOQE01000007.1 Genbank gene 4433 4699 . - . ID=gene-E3V84_00670;Name=E3V84_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00670 SOQE01000007.1 Protein Homology CDS 4433 4699 . - 0 ID=cds-TMR48625.1;Parent=gene-E3V84_00670;Dbxref=NCBI_GP:TMR48625.1;Name=TMR48625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358767.1;locus_tag=E3V84_00670;product=chorismate mutase;protein_id=TMR48625.1;transl_table=11 SOQE01000007.1 Genbank gene 4815 5258 . - . ID=gene-E3V84_00675;Name=E3V84_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00675 SOQE01000007.1 Protein Homology CDS 4815 5258 . - 0 ID=cds-TMR48626.1;Parent=gene-E3V84_00675;Dbxref=NCBI_GP:TMR48626.1;Name=TMR48626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358768.1;locus_tag=E3V84_00675;product=flavodoxin;protein_id=TMR48626.1;transl_table=11 SOQE01000007.1 Genbank gene 5362 6297 . + . ID=gene-E3V84_00680;Name=E3V84_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00680 SOQE01000007.1 Protein Homology CDS 5362 6297 . + 0 ID=cds-TMR48627.1;Parent=gene-E3V84_00680;Dbxref=NCBI_GP:TMR48627.1;Name=TMR48627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446379.1;locus_tag=E3V84_00680;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=TMR48627.1;transl_table=11 SOQE01000007.1 Genbank gene 6393 6635 . + . ID=gene-E3V84_00685;Name=E3V84_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00685 SOQE01000007.1 Protein Homology CDS 6393 6635 . + 0 ID=cds-TMR48628.1;Parent=gene-E3V84_00685;Dbxref=NCBI_GP:TMR48628.1;Name=TMR48628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358770.1;locus_tag=E3V84_00685;product=type B 50S ribosomal protein L31;protein_id=TMR48628.1;transl_table=11 SOQE01000007.1 Genbank gene 6726 7097 . + . ID=gene-E3V84_00690;Name=E3V84_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00690 SOQE01000007.1 Protein Homology CDS 6726 7097 . + 0 ID=cds-TMR48629.1;Parent=gene-E3V84_00690;Dbxref=NCBI_GP:TMR48629.1;Name=TMR48629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446381.1;locus_tag=E3V84_00690;product=RelB antitoxin;protein_id=TMR48629.1;transl_table=11 SOQE01000007.1 Genbank gene 7087 7446 . + . ID=gene-E3V84_00695;Name=E3V84_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00695 SOQE01000007.1 Protein Homology CDS 7087 7446 . + 0 ID=cds-TMR48630.1;Parent=gene-E3V84_00695;Dbxref=NCBI_GP:TMR48630.1;Name=TMR48630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446382.1;locus_tag=E3V84_00695;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR48630.1;transl_table=11 SOQE01000007.1 Genbank gene 7582 7752 . - . ID=gene-E3V84_00700;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=E3V84_00700 SOQE01000007.1 Protein Homology CDS 7582 7752 . - 0 ID=cds-TMR48631.1;Parent=gene-E3V84_00700;Dbxref=NCBI_GP:TMR48631.1;Name=TMR48631.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446383.1;locus_tag=E3V84_00700;product=twin-arginine translocase TatA/TatE family subunit;protein_id=TMR48631.1;transl_table=11 SOQE01000007.1 Genbank gene 7736 8467 . - . ID=gene-E3V84_00705;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=E3V84_00705 SOQE01000007.1 Protein Homology CDS 7736 8467 . - 0 ID=cds-TMR48632.1;Parent=gene-E3V84_00705;Dbxref=NCBI_GP:TMR48632.1;Name=TMR48632.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446384.1;locus_tag=E3V84_00705;product=twin-arginine translocase subunit TatC;protein_id=TMR48632.1;transl_table=11 SOQE01000007.1 Genbank gene 8468 10156 . - . ID=gene-E3V84_00710;Name=E3V84_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00710 SOQE01000007.1 Protein Homology CDS 8468 10156 . - 0 ID=cds-TMR48633.1;Parent=gene-E3V84_00710;Dbxref=NCBI_GP:TMR48633.1;Name=TMR48633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446385.1;locus_tag=E3V84_00710;product=FTR1 family iron permease;protein_id=TMR48633.1;transl_table=11 SOQE01000007.1 Genbank gene 10131 11345 . - . ID=gene-E3V84_00715;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=E3V84_00715 SOQE01000007.1 Protein Homology CDS 10131 11345 . - 0 ID=cds-TMR48634.1;Parent=gene-E3V84_00715;Dbxref=NCBI_GP:TMR48634.1;Name=TMR48634.1;gbkey=CDS;gene=efeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446386.1;locus_tag=E3V84_00715;product=deferrochelatase/peroxidase EfeB;protein_id=TMR48634.1;transl_table=11 SOQE01000007.1 Genbank gene 11351 12223 . - . ID=gene-E3V84_00720;Name=E3V84_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00720 SOQE01000007.1 Protein Homology CDS 11351 12223 . - 0 ID=cds-TMR48635.1;Parent=gene-E3V84_00720;Dbxref=NCBI_GP:TMR48635.1;Name=TMR48635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446387.1;locus_tag=E3V84_00720;product=EfeM/EfeO family lipoprotein;protein_id=TMR48635.1;transl_table=11 SOQE01000007.1 Genbank gene 12331 12690 . - . ID=gene-E3V84_00725;Name=E3V84_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00725 SOQE01000007.1 Protein Homology CDS 12331 12690 . - 0 ID=cds-TMR48644.1;Parent=gene-E3V84_00725;Dbxref=NCBI_GP:TMR48644.1;Name=TMR48644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284914.1;locus_tag=E3V84_00725;product=hypothetical protein;protein_id=TMR48644.1;transl_table=11 SOQE01000007.1 Genbank gene 12853 12984 . + . ID=gene-E3V84_00730;Name=E3V84_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00730 SOQE01000007.1 Protein Homology CDS 12853 12984 . + 0 ID=cds-TMR48636.1;Parent=gene-E3V84_00730;Dbxref=NCBI_GP:TMR48636.1;Name=TMR48636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446195.1;locus_tag=E3V84_00730;product=hypothetical protein;protein_id=TMR48636.1;transl_table=11 SOQE01000007.1 Genbank gene 12985 13890 . + . ID=gene-E3V84_00735;Name=E3V84_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00735 SOQE01000007.1 Protein Homology CDS 12985 13890 . + 0 ID=cds-TMR48637.1;Parent=gene-E3V84_00735;Dbxref=NCBI_GP:TMR48637.1;Name=TMR48637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358399.1;locus_tag=E3V84_00735;product=permease;protein_id=TMR48637.1;transl_table=11 SOQE01000007.1 Genbank gene 13887 14702 . + . ID=gene-E3V84_00740;Name=E3V84_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00740 SOQE01000007.1 Protein Homology CDS 13887 14702 . + 0 ID=cds-TMR48638.1;Parent=gene-E3V84_00740;Dbxref=NCBI_GP:TMR48638.1;Name=TMR48638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358398.1;locus_tag=E3V84_00740;product=TIGR03943 family protein;protein_id=TMR48638.1;transl_table=11 SOQE01000007.1 Genbank gene 14832 15548 . - . ID=gene-E3V84_00745;Name=E3V84_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00745 SOQE01000007.1 Protein Homology CDS 14832 15548 . - 0 ID=cds-TMR48639.1;Parent=gene-E3V84_00745;Dbxref=NCBI_GP:TMR48639.1;Name=TMR48639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759787.1;locus_tag=E3V84_00745;product=alpha/beta hydrolase;protein_id=TMR48639.1;transl_table=11 SOQE01000007.1 Genbank gene 15552 15863 . - . ID=gene-E3V84_00750;Name=E3V84_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00750 SOQE01000007.1 Protein Homology CDS 15552 15863 . - 0 ID=cds-TMR48640.1;Parent=gene-E3V84_00750;Dbxref=NCBI_GP:TMR48640.1;Name=TMR48640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446201.1;locus_tag=E3V84_00750;product=hypothetical protein;protein_id=TMR48640.1;transl_table=11 SOQE01000007.1 Genbank gene 15976 16155 . - . ID=gene-E3V84_00755;Name=E3V84_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00755 SOQE01000007.1 Protein Homology CDS 15976 16155 . - 0 ID=cds-TMR48641.1;Parent=gene-E3V84_00755;Dbxref=NCBI_GP:TMR48641.1;Name=TMR48641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859476.1;locus_tag=E3V84_00755;product=hypothetical protein;protein_id=TMR48641.1;transl_table=11 SOQE01000007.1 Genbank gene 16168 17040 . - . ID=gene-E3V84_00760;Name=E3V84_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00760 SOQE01000007.1 Protein Homology CDS 16168 17040 . - 0 ID=cds-TMR48642.1;Parent=gene-E3V84_00760;Dbxref=NCBI_GP:TMR48642.1;Name=TMR48642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358393.1;locus_tag=E3V84_00760;product=DUF4300 family protein;protein_id=TMR48642.1;transl_table=11 SOQE01000007.1 Genbank pseudogene 17372 17616 . + . ID=gene-E3V84_00765;Name=E3V84_00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00765;pseudo=true SOQE01000007.1 Protein Homology CDS 17372 17616 . + 0 ID=cds-E3V84_00765;Parent=gene-E3V84_00765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536835.1;locus_tag=E3V84_00765;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 SOQE01000007.1 Genbank gene 17713 17907 . + . ID=gene-E3V84_00770;Name=E3V84_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00770 SOQE01000007.1 Protein Homology CDS 17713 17907 . + 0 ID=cds-TMR48643.1;Parent=gene-E3V84_00770;Dbxref=NCBI_GP:TMR48643.1;Name=TMR48643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284915.1;locus_tag=E3V84_00770;product=S24 family peptidase;protein_id=TMR48643.1;transl_table=11 SOQE01000007.1 Genbank pseudogene 18043 18123 . + . ID=gene-E3V84_00775;Name=E3V84_00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00775;pseudo=true SOQE01000007.1 Protein Homology CDS 18043 18123 . + 0 ID=cds-E3V84_00775;Parent=gene-E3V84_00775;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=E3V84_00775;product=growth inhibitor PemK;pseudo=true;transl_table=11 SOQE01000007.1 Genbank pseudogene 18190 18294 . + . ID=gene-E3V84_00780;Name=E3V84_00780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00780;pseudo=true SOQE01000007.1 Protein Homology CDS 18190 18294 . + 0 ID=cds-E3V84_00780;Parent=gene-E3V84_00780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167984.1;locus_tag=E3V84_00780;product=integrase;pseudo=true;transl_table=11 ##sequence-region SOQE01000070.1 1 2962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000070.1 Genbank region 1 2962 . + . ID=SOQE01000070.1:1..2962;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000070.1 Genbank gene 1 317 . + . ID=gene-E3V84_06680;Name=E3V84_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06680;partial=true;start_range=.,1 SOQE01000070.1 Protein Homology CDS 1 317 . + 2 ID=cds-TMR45613.1;Parent=gene-E3V84_06680;Dbxref=NCBI_GP:TMR45613.1;Name=TMR45613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_06680;partial=true;product=IS630 family transposase;protein_id=TMR45613.1;start_range=.,1;transl_table=11 SOQE01000070.1 Genbank pseudogene 321 958 . + . ID=gene-E3V84_06685;Name=E3V84_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06685;pseudo=true SOQE01000070.1 Protein Homology CDS 321 958 . + 0 ID=cds-E3V84_06685;Parent=gene-E3V84_06685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359306.1;locus_tag=E3V84_06685;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 SOQE01000070.1 Genbank gene 955 1890 . + . ID=gene-E3V84_06690;Name=E3V84_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06690 SOQE01000070.1 Protein Homology CDS 955 1890 . + 0 ID=cds-TMR45614.1;Parent=gene-E3V84_06690;Dbxref=NCBI_GP:TMR45614.1;Name=TMR45614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359307.1;locus_tag=E3V84_06690;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=TMR45614.1;transl_table=11 SOQE01000070.1 Genbank gene 2118 2205 . - . ID=gene-E3V84_06695;Name=E3V84_06695;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06695 SOQE01000070.1 tRNAscan-SE tRNA 2118 2205 . - . ID=rna-E3V84_06695;Parent=gene-E3V84_06695;anticodon=(pos:complement(2169..2171));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06695;product=tRNA-Ser SOQE01000070.1 tRNAscan-SE exon 2118 2205 . - . ID=exon-E3V84_06695-1;Parent=rna-E3V84_06695;anticodon=(pos:complement(2169..2171));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06695;product=tRNA-Ser SOQE01000070.1 Genbank gene 2212 2285 . - . ID=gene-E3V84_06700;Name=E3V84_06700;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06700 SOQE01000070.1 tRNAscan-SE tRNA 2212 2285 . - . ID=rna-E3V84_06700;Parent=gene-E3V84_06700;anticodon=(pos:complement(2249..2251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06700;product=tRNA-Ile SOQE01000070.1 tRNAscan-SE exon 2212 2285 . - . ID=exon-E3V84_06700-1;Parent=rna-E3V84_06700;anticodon=(pos:complement(2249..2251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06700;product=tRNA-Ile SOQE01000070.1 Genbank gene 2321 2391 . - . ID=gene-E3V84_06705;Name=E3V84_06705;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06705 SOQE01000070.1 tRNAscan-SE tRNA 2321 2391 . - . ID=rna-E3V84_06705;Parent=gene-E3V84_06705;anticodon=(pos:complement(2357..2359));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06705;product=tRNA-Gly SOQE01000070.1 tRNAscan-SE exon 2321 2391 . - . ID=exon-E3V84_06705-1;Parent=rna-E3V84_06705;anticodon=(pos:complement(2357..2359));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06705;product=tRNA-Gly SOQE01000070.1 Genbank gene 2411 2483 . - . ID=gene-E3V84_06710;Name=E3V84_06710;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06710 SOQE01000070.1 tRNAscan-SE tRNA 2411 2483 . - . ID=rna-E3V84_06710;Parent=gene-E3V84_06710;anticodon=(pos:complement(2448..2450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06710;product=tRNA-Phe SOQE01000070.1 tRNAscan-SE exon 2411 2483 . - . ID=exon-E3V84_06710-1;Parent=rna-E3V84_06710;anticodon=(pos:complement(2448..2450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06710;product=tRNA-Phe SOQE01000070.1 Genbank gene 2487 2560 . - . ID=gene-E3V84_06715;Name=E3V84_06715;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06715 SOQE01000070.1 tRNAscan-SE tRNA 2487 2560 . - . ID=rna-E3V84_06715;Parent=gene-E3V84_06715;anticodon=(pos:complement(2524..2526));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06715;product=tRNA-Met SOQE01000070.1 tRNAscan-SE exon 2487 2560 . - . ID=exon-E3V84_06715-1;Parent=rna-E3V84_06715;anticodon=(pos:complement(2524..2526));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06715;product=tRNA-Met SOQE01000070.1 Genbank gene 2571 2660 . - . ID=gene-E3V84_06720;Name=E3V84_06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06720 SOQE01000070.1 tRNAscan-SE tRNA 2571 2660 . - . ID=rna-E3V84_06720;Parent=gene-E3V84_06720;anticodon=(pos:complement(2622..2624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06720;product=tRNA-Ser SOQE01000070.1 tRNAscan-SE exon 2571 2660 . - . ID=exon-E3V84_06720-1;Parent=rna-E3V84_06720;anticodon=(pos:complement(2622..2624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06720;product=tRNA-Ser SOQE01000070.1 Genbank gene 2671 2744 . - . ID=gene-E3V84_06725;Name=E3V84_06725;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06725 SOQE01000070.1 tRNAscan-SE tRNA 2671 2744 . - . ID=rna-E3V84_06725;Parent=gene-E3V84_06725;anticodon=(pos:complement(2708..2710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06725;product=tRNA-Met SOQE01000070.1 tRNAscan-SE exon 2671 2744 . - . ID=exon-E3V84_06725-1;Parent=rna-E3V84_06725;anticodon=(pos:complement(2708..2710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06725;product=tRNA-Met SOQE01000070.1 Genbank gene 2758 2831 . - . ID=gene-E3V84_06730;Name=E3V84_06730;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06730 SOQE01000070.1 tRNAscan-SE tRNA 2758 2831 . - . ID=rna-E3V84_06730;Parent=gene-E3V84_06730;anticodon=(pos:complement(2795..2797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06730;product=tRNA-Met SOQE01000070.1 tRNAscan-SE exon 2758 2831 . - . ID=exon-E3V84_06730-1;Parent=rna-E3V84_06730;anticodon=(pos:complement(2795..2797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06730;product=tRNA-Met SOQE01000070.1 Genbank gene 2837 2910 . - . ID=gene-E3V84_06735;Name=E3V84_06735;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_06735 SOQE01000070.1 tRNAscan-SE tRNA 2837 2910 . - . ID=rna-E3V84_06735;Parent=gene-E3V84_06735;anticodon=(pos:complement(2874..2876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06735;product=tRNA-Pro SOQE01000070.1 tRNAscan-SE exon 2837 2910 . - . ID=exon-E3V84_06735-1;Parent=rna-E3V84_06735;anticodon=(pos:complement(2874..2876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_06735;product=tRNA-Pro ##sequence-region SOQE01000071.1 1 50748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000071.1 Genbank region 1 50748 . + . ID=SOQE01000071.1:1..50748;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000071.1 Genbank gene 1 248 . + . ID=gene-E3V84_06740;Name=E3V84_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06740;partial=true;start_range=.,1 SOQE01000071.1 Protein Homology CDS 1 248 . + 2 ID=cds-TMR45567.1;Parent=gene-E3V84_06740;Dbxref=NCBI_GP:TMR45567.1;Name=TMR45567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445214.1;locus_tag=E3V84_06740;partial=true;product=hypothetical protein;protein_id=TMR45567.1;start_range=.,1;transl_table=11 SOQE01000071.1 Genbank gene 1394 1846 . + . ID=gene-E3V84_06745;Name=E3V84_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06745 SOQE01000071.1 Protein Homology CDS 1394 1846 . + 0 ID=cds-TMR45568.1;Parent=gene-E3V84_06745;Dbxref=NCBI_GP:TMR45568.1;Name=TMR45568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359128.1;locus_tag=E3V84_06745;product=YhcH/YjgK/YiaL family protein;protein_id=TMR45568.1;transl_table=11 SOQE01000071.1 Genbank gene 1865 3202 . + . ID=gene-E3V84_06750;Name=E3V84_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06750 SOQE01000071.1 Protein Homology CDS 1865 3202 . + 0 ID=cds-TMR45569.1;Parent=gene-E3V84_06750;Dbxref=NCBI_GP:TMR45569.1;Name=TMR45569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359127.1;locus_tag=E3V84_06750;product=sugar ABC transporter substrate-binding protein;protein_id=TMR45569.1;transl_table=11 SOQE01000071.1 Genbank pseudogene 3281 4164 . + . ID=gene-E3V84_06755;Name=E3V84_06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06755;pseudo=true SOQE01000071.1 Protein Homology CDS 3281 4164 . + 0 ID=cds-E3V84_06755;Parent=gene-E3V84_06755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359126.1;locus_tag=E3V84_06755;product=sugar ABC transporter permease;pseudo=true;transl_table=11 SOQE01000071.1 Genbank gene 4164 4997 . + . ID=gene-E3V84_06760;Name=E3V84_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06760 SOQE01000071.1 Protein Homology CDS 4164 4997 . + 0 ID=cds-TMR45570.1;Parent=gene-E3V84_06760;Dbxref=NCBI_GP:TMR45570.1;Name=TMR45570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359125.1;locus_tag=E3V84_06760;product=carbohydrate ABC transporter permease;protein_id=TMR45570.1;transl_table=11 SOQE01000071.1 Genbank gene 5229 6332 . + . ID=gene-E3V84_06765;Name=E3V84_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06765 SOQE01000071.1 Protein Homology CDS 5229 6332 . + 0 ID=cds-TMR45571.1;Parent=gene-E3V84_06765;Dbxref=NCBI_GP:TMR45571.1;Name=TMR45571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241740.1;locus_tag=E3V84_06765;product=Gfo/Idh/MocA family oxidoreductase;protein_id=TMR45571.1;transl_table=11 SOQE01000071.1 Genbank gene 6512 7210 . + . ID=gene-E3V84_06770;Name=E3V84_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06770 SOQE01000071.1 Protein Homology CDS 6512 7210 . + 0 ID=cds-TMR45572.1;Parent=gene-E3V84_06770;Dbxref=NCBI_GP:TMR45572.1;Name=TMR45572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359122.1;locus_tag=E3V84_06770;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TMR45572.1;transl_table=11 SOQE01000071.1 Genbank gene 7266 8747 . + . ID=gene-E3V84_06775;Name=E3V84_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06775 SOQE01000071.1 Protein Homology CDS 7266 8747 . + 0 ID=cds-TMR45573.1;Parent=gene-E3V84_06775;Dbxref=NCBI_GP:TMR45573.1;Name=TMR45573.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834377.1;locus_tag=E3V84_06775;product=PTS glucose transporter subunit IIBC;protein_id=TMR45573.1;transl_table=11 SOQE01000071.1 Genbank gene 8871 10199 . + . ID=gene-E3V84_06780;Name=E3V84_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06780 SOQE01000071.1 Protein Homology CDS 8871 10199 . + 0 ID=cds-TMR45574.1;Parent=gene-E3V84_06780;Dbxref=NCBI_GP:TMR45574.1;Name=TMR45574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359120.1;locus_tag=E3V84_06780;product=carbohydrate ABC transporter substrate-binding protein;protein_id=TMR45574.1;transl_table=11 SOQE01000071.1 Genbank gene 10421 11317 . + . ID=gene-E3V84_06785;Name=E3V84_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06785 SOQE01000071.1 Protein Homology CDS 10421 11317 . + 0 ID=cds-TMR45575.1;Parent=gene-E3V84_06785;Dbxref=NCBI_GP:TMR45575.1;Name=TMR45575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359119.1;locus_tag=E3V84_06785;product=sugar ABC transporter permease;protein_id=TMR45575.1;transl_table=11 SOQE01000071.1 Genbank gene 11333 12172 . + . ID=gene-E3V84_06790;Name=E3V84_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06790 SOQE01000071.1 Protein Homology CDS 11333 12172 . + 0 ID=cds-TMR45576.1;Parent=gene-E3V84_06790;Dbxref=NCBI_GP:TMR45576.1;Name=TMR45576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359118.1;locus_tag=E3V84_06790;product=carbohydrate ABC transporter permease;protein_id=TMR45576.1;transl_table=11 SOQE01000071.1 Genbank gene 12400 12852 . + . ID=gene-E3V84_06795;Name=E3V84_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06795 SOQE01000071.1 Protein Homology CDS 12400 12852 . + 0 ID=cds-TMR45577.1;Parent=gene-E3V84_06795;Dbxref=NCBI_GP:TMR45577.1;Name=TMR45577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359117.1;locus_tag=E3V84_06795;product=DUF386 family protein;protein_id=TMR45577.1;transl_table=11 SOQE01000071.1 Genbank gene 13136 13330 . + . ID=gene-E3V84_06800;Name=E3V84_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06800 SOQE01000071.1 Protein Homology CDS 13136 13330 . + 0 ID=cds-TMR45610.1;Parent=gene-E3V84_06800;Dbxref=NCBI_GP:TMR45610.1;Name=TMR45610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844411.1;locus_tag=E3V84_06800;product=hypothetical protein;protein_id=TMR45610.1;transl_table=11 SOQE01000071.1 Genbank gene 13413 14057 . + . ID=gene-E3V84_06805;Name=E3V84_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06805 SOQE01000071.1 Protein Homology CDS 13413 14057 . + 0 ID=cds-TMR45578.1;Parent=gene-E3V84_06805;Dbxref=NCBI_GP:TMR45578.1;Name=TMR45578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445724.1;locus_tag=E3V84_06805;product=DUF624 domain-containing protein;protein_id=TMR45578.1;transl_table=11 SOQE01000071.1 Genbank gene 14227 15144 . + . ID=gene-E3V84_06810;Name=E3V84_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06810 SOQE01000071.1 Protein Homology CDS 14227 15144 . + 0 ID=cds-TMR45579.1;Parent=gene-E3V84_06810;Dbxref=NCBI_GP:TMR45579.1;Name=TMR45579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445725.1;locus_tag=E3V84_06810;product=N-acetylneuraminate lyase;protein_id=TMR45579.1;transl_table=11 SOQE01000071.1 Genbank gene 15162 16046 . + . ID=gene-E3V84_06815;Name=E3V84_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06815 SOQE01000071.1 Protein Homology CDS 15162 16046 . + 0 ID=cds-TMR45580.1;Parent=gene-E3V84_06815;Dbxref=NCBI_GP:TMR45580.1;Name=TMR45580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359112.1;locus_tag=E3V84_06815;product=ROK family protein;protein_id=TMR45580.1;transl_table=11 SOQE01000071.1 Genbank gene 16143 16430 . + . ID=gene-E3V84_06820;Name=E3V84_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06820 SOQE01000071.1 Protein Homology CDS 16143 16430 . + 0 ID=cds-TMR45581.1;Parent=gene-E3V84_06820;Dbxref=NCBI_GP:TMR45581.1;Name=TMR45581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445727.1;locus_tag=E3V84_06820;product=hypothetical protein;protein_id=TMR45581.1;transl_table=11 SOQE01000071.1 Genbank gene 16420 16770 . + . ID=gene-E3V84_06825;Name=E3V84_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06825 SOQE01000071.1 Protein Homology CDS 16420 16770 . + 0 ID=cds-TMR45582.1;Parent=gene-E3V84_06825;Dbxref=NCBI_GP:TMR45582.1;Name=TMR45582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445728.1;locus_tag=E3V84_06825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR45582.1;transl_table=11 SOQE01000071.1 Genbank gene 16832 17683 . - . ID=gene-E3V84_06830;Name=E3V84_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06830 SOQE01000071.1 Protein Homology CDS 16832 17683 . - 0 ID=cds-TMR45583.1;Parent=gene-E3V84_06830;Dbxref=NCBI_GP:TMR45583.1;Name=TMR45583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359111.1;locus_tag=E3V84_06830;product=MurR/RpiR family transcriptional regulator;protein_id=TMR45583.1;transl_table=11 SOQE01000071.1 Genbank gene 17987 20044 . + . ID=gene-E3V84_06835;Name=E3V84_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06835 SOQE01000071.1 Protein Homology CDS 17987 20044 . + 0 ID=cds-TMR45584.1;Parent=gene-E3V84_06835;Dbxref=NCBI_GP:TMR45584.1;Name=TMR45584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359110.1;locus_tag=E3V84_06835;product=penicillin-binding protein 2;protein_id=TMR45584.1;transl_table=11 SOQE01000071.1 Genbank gene 20055 20651 . + . ID=gene-E3V84_06840;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=E3V84_06840 SOQE01000071.1 Protein Homology CDS 20055 20651 . + 0 ID=cds-TMR45585.1;Parent=gene-E3V84_06840;Dbxref=NCBI_GP:TMR45585.1;Name=TMR45585.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=E3V84_06840;product=recombination protein RecR;protein_id=TMR45585.1;transl_table=11 SOQE01000071.1 Genbank gene 20828 21871 . + . ID=gene-E3V84_06845;Name=E3V84_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06845 SOQE01000071.1 Protein Homology CDS 20828 21871 . + 0 ID=cds-TMR45586.1;Parent=gene-E3V84_06845;Dbxref=NCBI_GP:TMR45586.1;Name=TMR45586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445732.1;locus_tag=E3V84_06845;product=D-alanine--D-alanine ligase;protein_id=TMR45586.1;transl_table=11 SOQE01000071.1 Genbank gene 21956 23329 . + . ID=gene-E3V84_06850;Name=E3V84_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06850 SOQE01000071.1 Protein Homology CDS 21956 23329 . + 0 ID=cds-TMR45587.1;Parent=gene-E3V84_06850;Dbxref=NCBI_GP:TMR45587.1;Name=TMR45587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445733.1;locus_tag=E3V84_06850;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TMR45587.1;transl_table=11 SOQE01000071.1 Genbank gene 23316 23927 . + . ID=gene-E3V84_06855;Name=E3V84_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06855 SOQE01000071.1 Protein Homology CDS 23316 23927 . + 0 ID=cds-TMR45588.1;Parent=gene-E3V84_06855;Dbxref=NCBI_GP:TMR45588.1;Name=TMR45588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359106.1;locus_tag=E3V84_06855;product=NUDIX domain-containing protein;protein_id=TMR45588.1;transl_table=11 SOQE01000071.1 Genbank gene 24018 24722 . + . ID=gene-E3V84_06860;Name=E3V84_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06860 SOQE01000071.1 Protein Homology CDS 24018 24722 . + 0 ID=cds-TMR45589.1;Parent=gene-E3V84_06860;Dbxref=NCBI_GP:TMR45589.1;Name=TMR45589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359105.1;locus_tag=E3V84_06860;product=TIGR02206 family membrane protein;protein_id=TMR45589.1;transl_table=11 SOQE01000071.1 Genbank gene 24941 26314 . + . ID=gene-E3V84_06865;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=E3V84_06865 SOQE01000071.1 Protein Homology CDS 24941 26314 . + 0 ID=cds-TMR45590.1;Parent=gene-E3V84_06865;Dbxref=NCBI_GP:TMR45590.1;Name=TMR45590.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359104.1;locus_tag=E3V84_06865;product=cell division protein FtsA;protein_id=TMR45590.1;transl_table=11 SOQE01000071.1 Genbank gene 26331 27590 . + . ID=gene-E3V84_06870;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=E3V84_06870 SOQE01000071.1 Protein Homology CDS 26331 27590 . + 0 ID=cds-TMR45591.1;Parent=gene-E3V84_06870;Dbxref=NCBI_GP:TMR45591.1;Name=TMR45591.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359103.1;locus_tag=E3V84_06870;product=cell division protein FtsZ;protein_id=TMR45591.1;transl_table=11 SOQE01000071.1 Genbank gene 27595 28266 . + . ID=gene-E3V84_06875;Name=E3V84_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06875 SOQE01000071.1 Protein Homology CDS 27595 28266 . + 0 ID=cds-TMR45592.1;Parent=gene-E3V84_06875;Dbxref=NCBI_GP:TMR45592.1;Name=TMR45592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359102.1;locus_tag=E3V84_06875;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=TMR45592.1;transl_table=11 SOQE01000071.1 Genbank gene 28276 28815 . + . ID=gene-E3V84_06880;Name=E3V84_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06880 SOQE01000071.1 Protein Homology CDS 28276 28815 . + 0 ID=cds-TMR45593.1;Parent=gene-E3V84_06880;Dbxref=NCBI_GP:TMR45593.1;Name=TMR45593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359101.1;locus_tag=E3V84_06880;product=cell division protein SepF;protein_id=TMR45593.1;transl_table=11 SOQE01000071.1 Genbank gene 28815 29078 . + . ID=gene-E3V84_06885;Name=E3V84_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06885 SOQE01000071.1 Protein Homology CDS 28815 29078 . + 0 ID=cds-TMR45594.1;Parent=gene-E3V84_06885;Dbxref=NCBI_GP:TMR45594.1;Name=TMR45594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359100.1;locus_tag=E3V84_06885;product=YggT family protein;protein_id=TMR45594.1;transl_table=11 SOQE01000071.1 Genbank gene 29009 29860 . + . ID=gene-E3V84_06890;Name=E3V84_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06890 SOQE01000071.1 Protein Homology CDS 29009 29860 . + 0 ID=cds-TMR45595.1;Parent=gene-E3V84_06890;Dbxref=NCBI_GP:TMR45595.1;Name=TMR45595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359099.1;locus_tag=E3V84_06890;product=RNA-binding protein;protein_id=TMR45595.1;transl_table=11 SOQE01000071.1 Genbank pseudogene 29857 30655 . + . ID=gene-E3V84_06895;Name=E3V84_06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_06895;pseudo=true SOQE01000071.1 Protein Homology CDS 29857 30655 . + 0 ID=cds-E3V84_06895;Parent=gene-E3V84_06895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359098.1;locus_tag=E3V84_06895;product=DivIVA domain-containing protein;pseudo=true;transl_table=11 SOQE01000071.1 Genbank gene 30698 30859 . + . ID=gene-E3V84_06900;Name=E3V84_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06900 SOQE01000071.1 Protein Homology CDS 30698 30859 . + 0 ID=cds-TMR45596.1;Parent=gene-E3V84_06900;Dbxref=NCBI_GP:TMR45596.1;Name=TMR45596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359096.1;locus_tag=E3V84_06900;product=hypothetical protein;protein_id=TMR45596.1;transl_table=11 SOQE01000071.1 Genbank gene 31003 33795 . + . ID=gene-E3V84_06905;Name=E3V84_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06905 SOQE01000071.1 Protein Homology CDS 31003 33795 . + 0 ID=cds-TMR45597.1;Parent=gene-E3V84_06905;Dbxref=NCBI_GP:TMR45597.1;Name=TMR45597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359095.1;locus_tag=E3V84_06905;product=isoleucine--tRNA ligase;protein_id=TMR45597.1;transl_table=11 SOQE01000071.1 Genbank gene 33941 34633 . + . ID=gene-E3V84_06910;Name=E3V84_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06910 SOQE01000071.1 Protein Homology CDS 33941 34633 . + 0 ID=cds-TMR45598.1;Parent=gene-E3V84_06910;Dbxref=NCBI_GP:TMR45598.1;Name=TMR45598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359092.1;locus_tag=E3V84_06910;product=phosphoglycerate mutase;protein_id=TMR45598.1;transl_table=11 SOQE01000071.1 Genbank gene 34752 35453 . + . ID=gene-E3V84_06915;Name=E3V84_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06915 SOQE01000071.1 Protein Homology CDS 34752 35453 . + 0 ID=cds-TMR45599.1;Parent=gene-E3V84_06915;Dbxref=NCBI_GP:TMR45599.1;Name=TMR45599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445748.1;locus_tag=E3V84_06915;product=ABC transporter ATP-binding protein;protein_id=TMR45599.1;transl_table=11 SOQE01000071.1 Genbank gene 35455 38163 . + . ID=gene-E3V84_06920;Name=E3V84_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06920 SOQE01000071.1 Protein Homology CDS 35455 38163 . + 0 ID=cds-TMR45600.1;Parent=gene-E3V84_06920;Dbxref=NCBI_GP:TMR45600.1;Name=TMR45600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445749.1;locus_tag=E3V84_06920;product=FtsX-like permease family protein;protein_id=TMR45600.1;transl_table=11 SOQE01000071.1 Genbank gene 38256 38747 . - . ID=gene-E3V84_06925;Name=E3V84_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06925 SOQE01000071.1 Protein Homology CDS 38256 38747 . - 0 ID=cds-TMR45601.1;Parent=gene-E3V84_06925;Dbxref=NCBI_GP:TMR45601.1;Name=TMR45601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445750.1;locus_tag=E3V84_06925;product=thiol peroxidase;protein_id=TMR45601.1;transl_table=11 SOQE01000071.1 Genbank gene 38870 39799 . - . ID=gene-E3V84_06930;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=E3V84_06930 SOQE01000071.1 Protein Homology CDS 38870 39799 . - 0 ID=cds-TMR45602.1;Parent=gene-E3V84_06930;Dbxref=NCBI_GP:TMR45602.1;Name=TMR45602.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445751.1;locus_tag=E3V84_06930;product=metal ABC transporter substrate-binding lipoprotein/adhesin PsaA;protein_id=TMR45602.1;transl_table=11 SOQE01000071.1 Genbank gene 39831 40679 . - . ID=gene-E3V84_06935;Name=E3V84_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06935 SOQE01000071.1 Protein Homology CDS 39831 40679 . - 0 ID=cds-TMR45603.1;Parent=gene-E3V84_06935;Dbxref=NCBI_GP:TMR45603.1;Name=TMR45603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445752.1;locus_tag=E3V84_06935;product=metal ABC transporter permease;protein_id=TMR45603.1;transl_table=11 SOQE01000071.1 Genbank gene 40676 41398 . - . ID=gene-E3V84_06940;Name=E3V84_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06940 SOQE01000071.1 Protein Homology CDS 40676 41398 . - 0 ID=cds-TMR45604.1;Parent=gene-E3V84_06940;Dbxref=NCBI_GP:TMR45604.1;Name=TMR45604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445753.1;locus_tag=E3V84_06940;product=metal ABC transporter ATP-binding protein;protein_id=TMR45604.1;transl_table=11 SOQE01000071.1 Genbank gene 41871 43064 . - . ID=gene-E3V84_06945;Name=E3V84_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06945 SOQE01000071.1 Protein Homology CDS 41871 43064 . - 0 ID=cds-TMR45605.1;Parent=gene-E3V84_06945;Dbxref=NCBI_GP:TMR45605.1;Name=TMR45605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445754.1;locus_tag=E3V84_06945;product=MFS transporter;protein_id=TMR45605.1;transl_table=11 SOQE01000071.1 Genbank gene 43057 44172 . - . ID=gene-E3V84_06950;Name=E3V84_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06950 SOQE01000071.1 Protein Homology CDS 43057 44172 . - 0 ID=cds-TMR45606.1;Parent=gene-E3V84_06950;Dbxref=NCBI_GP:TMR45606.1;Name=TMR45606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445755.1;locus_tag=E3V84_06950;product=ThiF family adenylyltransferase;protein_id=TMR45606.1;transl_table=11 SOQE01000071.1 Genbank gene 44543 46435 . + . ID=gene-E3V84_06955;Name=E3V84_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06955 SOQE01000071.1 Protein Homology CDS 44543 46435 . + 0 ID=cds-TMR45607.1;Parent=gene-E3V84_06955;Dbxref=NCBI_GP:TMR45607.1;Name=TMR45607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359084.1;locus_tag=E3V84_06955;product=endopeptidase;protein_id=TMR45607.1;transl_table=11 SOQE01000071.1 Genbank gene 46618 47259 . + . ID=gene-E3V84_06960;Name=E3V84_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06960 SOQE01000071.1 Protein Homology CDS 46618 47259 . + 0 ID=cds-TMR45608.1;Parent=gene-E3V84_06960;Dbxref=NCBI_GP:TMR45608.1;Name=TMR45608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078992.1;locus_tag=E3V84_06960;product=recombinase family protein;protein_id=TMR45608.1;transl_table=11 SOQE01000071.1 Genbank gene 47668 50421 . + . ID=gene-E3V84_06965;Name=E3V84_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06965 SOQE01000071.1 Protein Homology CDS 47668 50421 . + 0 ID=cds-TMR45609.1;Parent=gene-E3V84_06965;Dbxref=NCBI_GP:TMR45609.1;Name=TMR45609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038248.1;locus_tag=E3V84_06965;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR45609.1;transl_table=11 ##sequence-region SOQE01000072.1 1 54585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000072.1 Genbank region 1 54585 . + . ID=SOQE01000072.1:1..54585;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000072.1 Genbank gene 762 1880 . - . ID=gene-E3V84_06970;Name=cbpD;gbkey=Gene;gene=cbpD;gene_biotype=protein_coding;locus_tag=E3V84_06970 SOQE01000072.1 Protein Homology CDS 762 1880 . - 0 ID=cds-TMR45201.1;Parent=gene-E3V84_06970;Dbxref=NCBI_GP:TMR45201.1;Name=TMR45201.1;gbkey=CDS;gene=cbpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447147.1;locus_tag=E3V84_06970;product=choline binding-anchored murein hydrolase CbpD;protein_id=TMR45201.1;transl_table=11 SOQE01000072.1 Genbank gene 1969 2235 . - . ID=gene-E3V84_06975;Name=E3V84_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06975 SOQE01000072.1 Protein Homology CDS 1969 2235 . - 0 ID=cds-TMR45202.1;Parent=gene-E3V84_06975;Dbxref=NCBI_GP:TMR45202.1;Name=TMR45202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447148.1;locus_tag=E3V84_06975;product=hypothetical protein;protein_id=TMR45202.1;transl_table=11 SOQE01000072.1 Genbank gene 2237 3589 . - . ID=gene-E3V84_06980;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=E3V84_06980 SOQE01000072.1 Protein Homology CDS 2237 3589 . - 0 ID=cds-TMR45203.1;Parent=gene-E3V84_06980;Dbxref=NCBI_GP:TMR45203.1;Name=TMR45203.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359599.1;locus_tag=E3V84_06980;product=replicative DNA helicase;protein_id=TMR45203.1;transl_table=11 SOQE01000072.1 Genbank gene 3633 4085 . - . ID=gene-E3V84_06985;Name=E3V84_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06985 SOQE01000072.1 Protein Homology CDS 3633 4085 . - 0 ID=cds-TMR45204.1;Parent=gene-E3V84_06985;Dbxref=NCBI_GP:TMR45204.1;Name=TMR45204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359600.1;locus_tag=E3V84_06985;product=50S ribosomal protein L9;protein_id=TMR45204.1;transl_table=11 SOQE01000072.1 Genbank gene 4082 6055 . - . ID=gene-E3V84_06990;Name=E3V84_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_06990 SOQE01000072.1 Protein Homology CDS 4082 6055 . - 0 ID=cds-TMR45205.1;Parent=gene-E3V84_06990;Dbxref=NCBI_GP:TMR45205.1;Name=TMR45205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359601.1;locus_tag=E3V84_06990;product=DHH family phosphoesterase;protein_id=TMR45205.1;transl_table=11 SOQE01000072.1 Genbank gene 6191 6739 . - . ID=gene-E3V84_06995;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=E3V84_06995 SOQE01000072.1 Protein Homology CDS 6191 6739 . - 0 ID=cds-TMR45206.1;Parent=gene-E3V84_06995;Dbxref=NCBI_GP:TMR45206.1;Name=TMR45206.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359602.1;locus_tag=E3V84_06995;product=ribosome-associated translation inhibitor RaiA;protein_id=TMR45206.1;transl_table=11 SOQE01000072.1 Genbank gene 6819 7481 . - . ID=gene-E3V84_07000;Name=E3V84_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07000 SOQE01000072.1 Protein Homology CDS 6819 7481 . - 0 ID=cds-TMR45207.1;Parent=gene-E3V84_07000;Dbxref=NCBI_GP:TMR45207.1;Name=TMR45207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359603.1;locus_tag=E3V84_07000;product=ComF family protein;protein_id=TMR45207.1;transl_table=11 SOQE01000072.1 Genbank gene 7478 8776 . - . ID=gene-E3V84_07005;Name=E3V84_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07005 SOQE01000072.1 Protein Homology CDS 7478 8776 . - 0 ID=cds-TMR45208.1;Parent=gene-E3V84_07005;Dbxref=NCBI_GP:TMR45208.1;Name=TMR45208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359604.1;locus_tag=E3V84_07005;product=DNA/RNA helicase;protein_id=TMR45208.1;transl_table=11 SOQE01000072.1 Genbank gene 8832 9467 . + . ID=gene-E3V84_07010;Name=E3V84_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07010 SOQE01000072.1 Protein Homology CDS 8832 9467 . + 0 ID=cds-TMR45209.1;Parent=gene-E3V84_07010;Dbxref=NCBI_GP:TMR45209.1;Name=TMR45209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359605.1;locus_tag=E3V84_07010;product=YigZ family protein;protein_id=TMR45209.1;transl_table=11 SOQE01000072.1 Genbank pseudogene 9572 9655 . + . ID=gene-E3V84_07015;Name=E3V84_07015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07015;pseudo=true SOQE01000072.1 Protein Homology CDS 9572 9655 . + 0 ID=cds-E3V84_07015;Parent=gene-E3V84_07015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863899.1;locus_tag=E3V84_07015;product=PH domain-containing protein;pseudo=true;transl_table=11 SOQE01000072.1 Genbank gene 9752 10678 . + . ID=gene-E3V84_07020;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=E3V84_07020 SOQE01000072.1 Protein Homology CDS 9752 10678 . + 0 ID=cds-TMR45210.1;Parent=gene-E3V84_07020;Dbxref=NCBI_GP:TMR45210.1;Name=TMR45210.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447156.1;locus_tag=E3V84_07020;product=cysteine synthase A;protein_id=TMR45210.1;transl_table=11 SOQE01000072.1 Genbank gene 10800 11840 . - . ID=gene-E3V84_07025;Name=E3V84_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07025 SOQE01000072.1 Protein Homology CDS 10800 11840 . - 0 ID=cds-TMR45211.1;Parent=gene-E3V84_07025;Dbxref=NCBI_GP:TMR45211.1;Name=TMR45211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003053075.1;locus_tag=E3V84_07025;product=elongation factor Ts;protein_id=TMR45211.1;transl_table=11 SOQE01000072.1 Genbank gene 11920 12699 . - . ID=gene-E3V84_07030;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=E3V84_07030 SOQE01000072.1 Protein Homology CDS 11920 12699 . - 0 ID=cds-TMR45212.1;Parent=gene-E3V84_07030;Dbxref=NCBI_GP:TMR45212.1;Name=TMR45212.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447158.1;locus_tag=E3V84_07030;product=30S ribosomal protein S2;protein_id=TMR45212.1;transl_table=11 SOQE01000072.1 Genbank gene 12922 14100 . - . ID=gene-E3V84_07035;Name=E3V84_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07035 SOQE01000072.1 Protein Homology CDS 12922 14100 . - 0 ID=cds-TMR45213.1;Parent=gene-E3V84_07035;Dbxref=NCBI_GP:TMR45213.1;Name=TMR45213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359612.1;locus_tag=E3V84_07035;product=CHAP domain-containing protein;protein_id=TMR45213.1;transl_table=11 SOQE01000072.1 Genbank gene 14194 14688 . - . ID=gene-E3V84_07040;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=E3V84_07040 SOQE01000072.1 Protein Homology CDS 14194 14688 . - 0 ID=cds-TMR45214.1;Parent=gene-E3V84_07040;Dbxref=NCBI_GP:TMR45214.1;Name=TMR45214.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359613.1;locus_tag=E3V84_07040;product=rod shape-determining protein MreD;protein_id=TMR45214.1;transl_table=11 SOQE01000072.1 Genbank gene 14688 15506 . - . ID=gene-E3V84_07045;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=E3V84_07045 SOQE01000072.1 Protein Homology CDS 14688 15506 . - 0 ID=cds-TMR45215.1;Parent=gene-E3V84_07045;Dbxref=NCBI_GP:TMR45215.1;Name=TMR45215.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359614.1;locus_tag=E3V84_07045;product=rod shape-determining protein MreC;protein_id=TMR45215.1;transl_table=11 SOQE01000072.1 Genbank gene 15566 16360 . - . ID=gene-E3V84_07050;Name=E3V84_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07050 SOQE01000072.1 Protein Homology CDS 15566 16360 . - 0 ID=cds-TMR45216.1;Parent=gene-E3V84_07050;Dbxref=NCBI_GP:TMR45216.1;Name=TMR45216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359615.1;locus_tag=E3V84_07050;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TMR45216.1;transl_table=11 SOQE01000072.1 Genbank gene 16353 17192 . - . ID=gene-E3V84_07055;Name=E3V84_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07055 SOQE01000072.1 Protein Homology CDS 16353 17192 . - 0 ID=cds-TMR45217.1;Parent=gene-E3V84_07055;Dbxref=NCBI_GP:TMR45217.1;Name=TMR45217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447163.1;locus_tag=E3V84_07055;product=energy-coupling factor transporter ATPase;protein_id=TMR45217.1;transl_table=11 SOQE01000072.1 Genbank gene 17177 18004 . - . ID=gene-E3V84_07060;Name=E3V84_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07060 SOQE01000072.1 Protein Homology CDS 17177 18004 . - 0 ID=cds-TMR45218.1;Parent=gene-E3V84_07060;Dbxref=NCBI_GP:TMR45218.1;Name=TMR45218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447164.1;locus_tag=E3V84_07060;product=energy-coupling factor transporter ATPase;protein_id=TMR45218.1;transl_table=11 SOQE01000072.1 Genbank gene 18001 18546 . - . ID=gene-E3V84_07065;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=E3V84_07065 SOQE01000072.1 Protein Homology CDS 18001 18546 . - 0 ID=cds-TMR45219.1;Parent=gene-E3V84_07065;Dbxref=NCBI_GP:TMR45219.1;Name=TMR45219.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359618.1;locus_tag=E3V84_07065;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TMR45219.1;transl_table=11 SOQE01000072.1 Genbank gene 18557 19408 . - . ID=gene-E3V84_07070;Name=E3V84_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07070 SOQE01000072.1 Protein Homology CDS 18557 19408 . - 0 ID=cds-TMR45220.1;Parent=gene-E3V84_07070;Dbxref=NCBI_GP:TMR45220.1;Name=TMR45220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359619.1;locus_tag=E3V84_07070;product=helix-turn-helix domain-containing protein;protein_id=TMR45220.1;transl_table=11 SOQE01000072.1 Genbank gene 19441 20724 . - . ID=gene-E3V84_07075;Name=E3V84_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07075 SOQE01000072.1 Protein Homology CDS 19441 20724 . - 0 ID=cds-TMR45221.1;Parent=gene-E3V84_07075;Dbxref=NCBI_GP:TMR45221.1;Name=TMR45221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359620.1;locus_tag=E3V84_07075;product=insulinase family protein;protein_id=TMR45221.1;transl_table=11 SOQE01000072.1 Genbank gene 20721 21971 . - . ID=gene-E3V84_07080;Name=E3V84_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07080 SOQE01000072.1 Protein Homology CDS 20721 21971 . - 0 ID=cds-TMR45222.1;Parent=gene-E3V84_07080;Dbxref=NCBI_GP:TMR45222.1;Name=TMR45222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359621.1;locus_tag=E3V84_07080;product=insulinase family protein;protein_id=TMR45222.1;transl_table=11 SOQE01000072.1 Genbank gene 22130 22498 . + . ID=gene-E3V84_07085;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=E3V84_07085 SOQE01000072.1 Protein Homology CDS 22130 22498 . + 0 ID=cds-TMR45223.1;Parent=gene-E3V84_07085;Dbxref=NCBI_GP:TMR45223.1;Name=TMR45223.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359622.1;locus_tag=E3V84_07085;product=S4 domain-containing protein YaaA;protein_id=TMR45223.1;transl_table=11 SOQE01000072.1 Genbank gene 22501 23598 . + . ID=gene-E3V84_07090;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=E3V84_07090 SOQE01000072.1 Protein Homology CDS 22501 23598 . + 0 ID=cds-TMR45224.1;Parent=gene-E3V84_07090;Dbxref=NCBI_GP:TMR45224.1;Name=TMR45224.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359623.1;locus_tag=E3V84_07090;product=DNA replication/repair protein RecF;protein_id=TMR45224.1;transl_table=11 SOQE01000072.1 Genbank gene 23650 25128 . - . ID=gene-E3V84_07095;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=E3V84_07095 SOQE01000072.1 Protein Homology CDS 23650 25128 . - 0 ID=cds-TMR45225.1;Parent=gene-E3V84_07095;Dbxref=NCBI_GP:TMR45225.1;Name=TMR45225.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447171.1;locus_tag=E3V84_07095;product=IMP dehydrogenase;protein_id=TMR45225.1;transl_table=11 SOQE01000072.1 Genbank gene 25280 26305 . - . ID=gene-E3V84_07100;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=E3V84_07100 SOQE01000072.1 Protein Homology CDS 25280 26305 . - 0 ID=cds-TMR45226.1;Parent=gene-E3V84_07100;Dbxref=NCBI_GP:TMR45226.1;Name=TMR45226.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447172.1;locus_tag=E3V84_07100;product=tryptophan--tRNA ligase;protein_id=TMR45226.1;transl_table=11 SOQE01000072.1 Genbank gene 26511 28133 . + . ID=gene-E3V84_07105;Name=E3V84_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07105 SOQE01000072.1 Protein Homology CDS 26511 28133 . + 0 ID=cds-TMR45227.1;Parent=gene-E3V84_07105;Dbxref=NCBI_GP:TMR45227.1;Name=TMR45227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511338.1;locus_tag=E3V84_07105;product=ATP-binding cassette domain-containing protein;protein_id=TMR45227.1;transl_table=11 SOQE01000072.1 Genbank gene 28193 30736 . + . ID=gene-E3V84_07110;Name=E3V84_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07110 SOQE01000072.1 Protein Homology CDS 28193 30736 . + 0 ID=cds-TMR45228.1;Parent=gene-E3V84_07110;Dbxref=NCBI_GP:TMR45228.1;Name=TMR45228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359627.1;locus_tag=E3V84_07110;product=copper ABC transporter permease;protein_id=TMR45228.1;transl_table=11 SOQE01000072.1 Genbank gene 30766 33405 . - . ID=gene-E3V84_07115;Name=E3V84_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07115 SOQE01000072.1 Protein Homology CDS 30766 33405 . - 0 ID=cds-TMR45229.1;Parent=gene-E3V84_07115;Dbxref=NCBI_GP:TMR45229.1;Name=TMR45229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447175.1;locus_tag=E3V84_07115;product=YhgE/Pip domain-containing protein;protein_id=TMR45229.1;transl_table=11 SOQE01000072.1 Genbank gene 33533 34075 . + . ID=gene-E3V84_07120;Name=E3V84_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07120 SOQE01000072.1 Protein Homology CDS 33533 34075 . + 0 ID=cds-TMR45230.1;Parent=gene-E3V84_07120;Dbxref=NCBI_GP:TMR45230.1;Name=TMR45230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359631.1;locus_tag=E3V84_07120;product=TetR/AcrR family transcriptional regulator;protein_id=TMR45230.1;transl_table=11 SOQE01000072.1 Genbank gene 34116 34189 . - . ID=gene-E3V84_07125;Name=E3V84_07125;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_07125 SOQE01000072.1 tRNAscan-SE tRNA 34116 34189 . - . ID=rna-E3V84_07125;Parent=gene-E3V84_07125;anticodon=(pos:complement(34153..34155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07125;product=tRNA-Asn SOQE01000072.1 tRNAscan-SE exon 34116 34189 . - . ID=exon-E3V84_07125-1;Parent=rna-E3V84_07125;anticodon=(pos:complement(34153..34155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07125;product=tRNA-Asn SOQE01000072.1 Genbank gene 34195 34266 . - . ID=gene-E3V84_07130;Name=E3V84_07130;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_07130 SOQE01000072.1 tRNAscan-SE tRNA 34195 34266 . - . ID=rna-E3V84_07130;Parent=gene-E3V84_07130;anticodon=(pos:complement(34231..34233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07130;product=tRNA-Glu SOQE01000072.1 tRNAscan-SE exon 34195 34266 . - . ID=exon-E3V84_07130-1;Parent=rna-E3V84_07130;anticodon=(pos:complement(34231..34233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07130;product=tRNA-Glu SOQE01000072.1 Genbank gene 34318 35070 . - . ID=gene-E3V84_07135;Name=E3V84_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07135 SOQE01000072.1 Protein Homology CDS 34318 35070 . - 0 ID=cds-TMR45231.1;Parent=gene-E3V84_07135;Dbxref=NCBI_GP:TMR45231.1;Name=TMR45231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359632.1;locus_tag=E3V84_07135;product=response regulator transcription factor;protein_id=TMR45231.1;transl_table=11 SOQE01000072.1 Genbank gene 35067 36392 . - . ID=gene-E3V84_07140;Name=E3V84_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07140 SOQE01000072.1 Protein Homology CDS 35067 36392 . - 0 ID=cds-TMR45232.1;Parent=gene-E3V84_07140;Dbxref=NCBI_GP:TMR45232.1;Name=TMR45232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359633.1;locus_tag=E3V84_07140;product=sensor histidine kinase;protein_id=TMR45232.1;transl_table=11 SOQE01000072.1 Genbank gene 36413 36538 . - . ID=gene-E3V84_07145;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=E3V84_07145 SOQE01000072.1 Protein Homology CDS 36413 36538 . - 0 ID=cds-TMR45233.1;Parent=gene-E3V84_07145;Dbxref=NCBI_GP:TMR45233.1;Name=TMR45233.1;gbkey=CDS;gene=comC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359634.1;locus_tag=E3V84_07145;product=competence-stimulating peptide ComC;protein_id=TMR45233.1;transl_table=11 SOQE01000072.1 Genbank gene 36703 36776 . - . ID=gene-E3V84_07150;Name=E3V84_07150;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_07150 SOQE01000072.1 tRNAscan-SE tRNA 36703 36776 . - . ID=rna-E3V84_07150;Parent=gene-E3V84_07150;anticodon=(pos:complement(36740..36742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07150;product=tRNA-Arg SOQE01000072.1 tRNAscan-SE exon 36703 36776 . - . ID=exon-E3V84_07150-1;Parent=rna-E3V84_07150;anticodon=(pos:complement(36740..36742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_07150;product=tRNA-Arg SOQE01000072.1 Genbank gene 36817 37296 . - . ID=gene-E3V84_07155;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=E3V84_07155 SOQE01000072.1 Protein Homology CDS 36817 37296 . - 0 ID=cds-TMR45234.1;Parent=gene-E3V84_07155;Dbxref=NCBI_GP:TMR45234.1;Name=TMR45234.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359635.1;locus_tag=E3V84_07155;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=TMR45234.1;transl_table=11 SOQE01000072.1 Genbank gene 37467 38660 . + . ID=gene-E3V84_07160;Name=E3V84_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07160 SOQE01000072.1 Protein Homology CDS 37467 38660 . + 0 ID=cds-TMR45235.1;Parent=gene-E3V84_07160;Dbxref=NCBI_GP:TMR45235.1;Name=TMR45235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359636.1;locus_tag=E3V84_07160;product=serine protease;protein_id=TMR45235.1;transl_table=11 SOQE01000072.1 Genbank gene 38718 39476 . + . ID=gene-E3V84_07165;Name=E3V84_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07165 SOQE01000072.1 Protein Homology CDS 38718 39476 . + 0 ID=cds-TMR45236.1;Parent=gene-E3V84_07165;Dbxref=NCBI_GP:TMR45236.1;Name=TMR45236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359637.1;locus_tag=E3V84_07165;product=ParB/RepB/Spo0J family partition protein;protein_id=TMR45236.1;transl_table=11 SOQE01000072.1 Genbank gene 39689 41050 . + . ID=gene-E3V84_07170;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=E3V84_07170 SOQE01000072.1 Protein Homology CDS 39689 41050 . + 0 ID=cds-TMR45237.1;Parent=gene-E3V84_07170;Dbxref=NCBI_GP:TMR45237.1;Name=TMR45237.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357595.1;locus_tag=E3V84_07170;product=chromosomal replication initiator protein DnaA;protein_id=TMR45237.1;transl_table=11 SOQE01000072.1 Genbank gene 41209 42345 . + . ID=gene-E3V84_07175;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=E3V84_07175 SOQE01000072.1 Protein Homology CDS 41209 42345 . + 0 ID=cds-TMR45238.1;Parent=gene-E3V84_07175;Dbxref=NCBI_GP:TMR45238.1;Name=TMR45238.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357596.1;locus_tag=E3V84_07175;product=DNA polymerase III subunit beta;protein_id=TMR45238.1;transl_table=11 SOQE01000072.1 Genbank gene 42410 42604 . + . ID=gene-E3V84_07180;Name=E3V84_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07180 SOQE01000072.1 Protein Homology CDS 42410 42604 . + 0 ID=cds-TMR45239.1;Parent=gene-E3V84_07180;Dbxref=NCBI_GP:TMR45239.1;Name=TMR45239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357597.1;locus_tag=E3V84_07180;product=DUF951 family protein;protein_id=TMR45239.1;transl_table=11 SOQE01000072.1 Genbank gene 42688 43803 . + . ID=gene-E3V84_07185;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=E3V84_07185 SOQE01000072.1 Protein Homology CDS 42688 43803 . + 0 ID=cds-TMR45249.1;Parent=gene-E3V84_07185;Dbxref=NCBI_GP:TMR45249.1;Name=TMR45249.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357598.1;locus_tag=E3V84_07185;product=redox-regulated ATPase YchF;protein_id=TMR45249.1;transl_table=11 SOQE01000072.1 Genbank gene 43875 44444 . + . ID=gene-E3V84_07190;Name=E3V84_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07190 SOQE01000072.1 Protein Homology CDS 43875 44444 . + 0 ID=cds-TMR45240.1;Parent=gene-E3V84_07190;Dbxref=NCBI_GP:TMR45240.1;Name=TMR45240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357599.1;locus_tag=E3V84_07190;product=aminoacyl-tRNA hydrolase;protein_id=TMR45240.1;transl_table=11 SOQE01000072.1 Genbank gene 44445 47954 . + . ID=gene-E3V84_07195;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=E3V84_07195 SOQE01000072.1 Protein Homology CDS 44445 47954 . + 0 ID=cds-TMR45241.1;Parent=gene-E3V84_07195;Dbxref=NCBI_GP:TMR45241.1;Name=TMR45241.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357600.1;locus_tag=E3V84_07195;product=transcription-repair coupling factor;protein_id=TMR45241.1;transl_table=11 SOQE01000072.1 Genbank gene 48012 48278 . + . ID=gene-E3V84_07200;Name=E3V84_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07200 SOQE01000072.1 Protein Homology CDS 48012 48278 . + 0 ID=cds-TMR45242.1;Parent=gene-E3V84_07200;Dbxref=NCBI_GP:TMR45242.1;Name=TMR45242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357601.1;locus_tag=E3V84_07200;product=RNA-binding S4 domain-containing protein;protein_id=TMR45242.1;transl_table=11 SOQE01000072.1 Genbank gene 48271 48639 . + . ID=gene-E3V84_07205;Name=E3V84_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07205 SOQE01000072.1 Protein Homology CDS 48271 48639 . + 0 ID=cds-TMR45243.1;Parent=gene-E3V84_07205;Dbxref=NCBI_GP:TMR45243.1;Name=TMR45243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445184.1;locus_tag=E3V84_07205;product=septum formation initiator family protein;protein_id=TMR45243.1;transl_table=11 SOQE01000072.1 Genbank gene 48759 50027 . + . ID=gene-E3V84_07210;Name=E3V84_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07210 SOQE01000072.1 Protein Homology CDS 48759 50027 . + 0 ID=cds-TMR45244.1;Parent=gene-E3V84_07210;Dbxref=NCBI_GP:TMR45244.1;Name=TMR45244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445185.1;locus_tag=E3V84_07210;product=serine hydrolase;protein_id=TMR45244.1;transl_table=11 SOQE01000072.1 Genbank gene 50024 51301 . + . ID=gene-E3V84_07215;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=E3V84_07215 SOQE01000072.1 Protein Homology CDS 50024 51301 . + 0 ID=cds-TMR45245.1;Parent=gene-E3V84_07215;Dbxref=NCBI_GP:TMR45245.1;Name=TMR45245.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357604.1;locus_tag=E3V84_07215;product=tRNA lysidine(34) synthetase TilS;protein_id=TMR45245.1;transl_table=11 SOQE01000072.1 Genbank gene 51306 51848 . + . ID=gene-E3V84_07220;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=E3V84_07220 SOQE01000072.1 Protein Homology CDS 51306 51848 . + 0 ID=cds-TMR45246.1;Parent=gene-E3V84_07220;Dbxref=NCBI_GP:TMR45246.1;Name=TMR45246.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445187.1;locus_tag=E3V84_07220;product=hypoxanthine phosphoribosyltransferase;protein_id=TMR45246.1;transl_table=11 SOQE01000072.1 Genbank gene 51864 53822 . + . ID=gene-E3V84_07225;Name=E3V84_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07225 SOQE01000072.1 Protein Homology CDS 51864 53822 . + 0 ID=cds-TMR45247.1;Parent=gene-E3V84_07225;Dbxref=NCBI_GP:TMR45247.1;Name=TMR45247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445188.1;locus_tag=E3V84_07225;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=TMR45247.1;transl_table=11 SOQE01000072.1 Genbank gene 53942 54421 . + . ID=gene-E3V84_07230;Name=E3V84_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07230 SOQE01000072.1 Protein Homology CDS 53942 54421 . + 0 ID=cds-TMR45248.1;Parent=gene-E3V84_07230;Dbxref=NCBI_GP:TMR45248.1;Name=TMR45248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588858.1;locus_tag=E3V84_07230;product=sigma-70 family RNA polymerase sigma factor;protein_id=TMR45248.1;transl_table=11 ##sequence-region SOQE01000073.1 1 28642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000073.1 Genbank region 1 28642 . + . ID=SOQE01000073.1:1..28642;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000073.1 Genbank gene 1 767 . + . ID=gene-E3V84_07235;Name=E3V84_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07235;partial=true;start_range=.,1 SOQE01000073.1 Protein Homology CDS 1 767 . + 2 ID=cds-TMR45044.1;Parent=gene-E3V84_07235;Dbxref=NCBI_GP:TMR45044.1;Name=TMR45044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V84_07235;partial=true;product=IS66 family transposase;protein_id=TMR45044.1;start_range=.,1;transl_table=11 SOQE01000073.1 Genbank gene 793 999 . + . ID=gene-E3V84_07240;Name=E3V84_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07240 SOQE01000073.1 Protein Homology CDS 793 999 . + 0 ID=cds-TMR45045.1;Parent=gene-E3V84_07240;Dbxref=NCBI_GP:TMR45045.1;Name=TMR45045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394963.1;locus_tag=E3V84_07240;product=hypothetical protein;protein_id=TMR45045.1;transl_table=11 SOQE01000073.1 Genbank pseudogene 990 1073 . + . ID=gene-E3V84_07245;Name=E3V84_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07245;pseudo=true SOQE01000073.1 Protein Homology CDS 990 1073 . + 0 ID=cds-E3V84_07245;Parent=gene-E3V84_07245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883906.1;locus_tag=E3V84_07245;product=aldose epimerase;pseudo=true;transl_table=11 SOQE01000073.1 Genbank gene 1231 1656 . + . ID=gene-E3V84_07250;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=E3V84_07250 SOQE01000073.1 Protein Homology CDS 1231 1656 . + 0 ID=cds-TMR45046.1;Parent=gene-E3V84_07250;Dbxref=NCBI_GP:TMR45046.1;Name=TMR45046.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446138.1;locus_tag=E3V84_07250;product=galactose-6-phosphate isomerase subunit LacA;protein_id=TMR45046.1;transl_table=11 SOQE01000073.1 Genbank gene 1687 2202 . + . ID=gene-E3V84_07255;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=E3V84_07255 SOQE01000073.1 Protein Homology CDS 1687 2202 . + 0 ID=cds-TMR45047.1;Parent=gene-E3V84_07255;Dbxref=NCBI_GP:TMR45047.1;Name=TMR45047.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358668.1;locus_tag=E3V84_07255;product=galactose-6-phosphate isomerase subunit LacB;protein_id=TMR45047.1;transl_table=11 SOQE01000073.1 Genbank gene 2213 3142 . + . ID=gene-E3V84_07260;Name=E3V84_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07260 SOQE01000073.1 Protein Homology CDS 2213 3142 . + 0 ID=cds-TMR45048.1;Parent=gene-E3V84_07260;Dbxref=NCBI_GP:TMR45048.1;Name=TMR45048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358667.1;locus_tag=E3V84_07260;product=tagatose-6-phosphate kinase;protein_id=TMR45048.1;transl_table=11 SOQE01000073.1 Genbank gene 3144 4124 . + . ID=gene-E3V84_07265;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=E3V84_07265 SOQE01000073.1 Protein Homology CDS 3144 4124 . + 0 ID=cds-TMR45049.1;Parent=gene-E3V84_07265;Dbxref=NCBI_GP:TMR45049.1;Name=TMR45049.1;gbkey=CDS;gene=lacD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358666.1;locus_tag=E3V84_07265;product=tagatose-bisphosphate aldolase;protein_id=TMR45049.1;transl_table=11 SOQE01000073.1 Genbank gene 4525 5001 . + . ID=gene-E3V84_07270;Name=E3V84_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07270 SOQE01000073.1 Protein Homology CDS 4525 5001 . + 0 ID=cds-TMR45074.1;Parent=gene-E3V84_07270;Dbxref=NCBI_GP:TMR45074.1;Name=TMR45074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001849973.1;locus_tag=E3V84_07270;product=hypothetical protein;protein_id=TMR45074.1;transl_table=11 SOQE01000073.1 Genbank gene 5398 6234 . + . ID=gene-E3V84_07275;Name=E3V84_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07275 SOQE01000073.1 Protein Homology CDS 5398 6234 . + 0 ID=cds-TMR45050.1;Parent=gene-E3V84_07275;Dbxref=NCBI_GP:TMR45050.1;Name=TMR45050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446148.1;locus_tag=E3V84_07275;product=transcription antiterminator;protein_id=TMR45050.1;transl_table=11 SOQE01000073.1 Genbank gene 6269 6586 . + . ID=gene-E3V84_07280;Name=E3V84_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07280 SOQE01000073.1 Protein Homology CDS 6269 6586 . + 0 ID=cds-TMR45051.1;Parent=gene-E3V84_07280;Dbxref=NCBI_GP:TMR45051.1;Name=TMR45051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358664.1;locus_tag=E3V84_07280;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=TMR45051.1;transl_table=11 SOQE01000073.1 Genbank gene 6586 8277 . + . ID=gene-E3V84_07285;Name=E3V84_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07285 SOQE01000073.1 Protein Homology CDS 6586 8277 . + 0 ID=cds-TMR45052.1;Parent=gene-E3V84_07285;Dbxref=NCBI_GP:TMR45052.1;Name=TMR45052.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358663.1;locus_tag=E3V84_07285;product=PTS lactose transporter subunit IIBC;protein_id=TMR45052.1;transl_table=11 SOQE01000073.1 Genbank gene 8481 9887 . + . ID=gene-E3V84_07290;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=E3V84_07290 SOQE01000073.1 Protein Homology CDS 8481 9887 . + 0 ID=cds-TMR45053.1;Parent=gene-E3V84_07290;Dbxref=NCBI_GP:TMR45053.1;Name=TMR45053.1;gbkey=CDS;gene=lacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358662.1;locus_tag=E3V84_07290;product=6-phospho-beta-galactosidase;protein_id=TMR45053.1;transl_table=11 SOQE01000073.1 Genbank gene 9929 10186 . + . ID=gene-E3V84_07295;Name=E3V84_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07295 SOQE01000073.1 Protein Homology CDS 9929 10186 . + 0 ID=cds-TMR45054.1;Parent=gene-E3V84_07295;Dbxref=NCBI_GP:TMR45054.1;Name=TMR45054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446152.1;locus_tag=E3V84_07295;product=DUF3884 family protein;protein_id=TMR45054.1;transl_table=11 SOQE01000073.1 Genbank gene 10471 11232 . - . ID=gene-E3V84_07300;Name=E3V84_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07300 SOQE01000073.1 Protein Homology CDS 10471 11232 . - 0 ID=cds-TMR45055.1;Parent=gene-E3V84_07300;Dbxref=NCBI_GP:TMR45055.1;Name=TMR45055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358661.1;locus_tag=E3V84_07300;product=DeoR/GlpR transcriptional regulator;protein_id=TMR45055.1;transl_table=11 SOQE01000073.1 Genbank gene 11566 12528 . - . ID=gene-E3V84_07305;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=E3V84_07305 SOQE01000073.1 Protein Homology CDS 11566 12528 . - 0 ID=cds-TMR45056.1;Parent=gene-E3V84_07305;Dbxref=NCBI_GP:TMR45056.1;Name=TMR45056.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358660.1;locus_tag=E3V84_07305;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=TMR45056.1;transl_table=11 SOQE01000073.1 Genbank gene 12716 14875 . - . ID=gene-E3V84_07310;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=E3V84_07310 SOQE01000073.1 Protein Homology CDS 12716 14875 . - 0 ID=cds-TMR45057.1;Parent=gene-E3V84_07310;Dbxref=NCBI_GP:TMR45057.1;Name=TMR45057.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=E3V84_07310;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=TMR45057.1;transl_table=11 SOQE01000073.1 Genbank gene 14956 15174 . - . ID=gene-E3V84_07315;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=E3V84_07315 SOQE01000073.1 Protein Homology CDS 14956 15174 . - 0 ID=cds-TMR45058.1;Parent=gene-E3V84_07315;Dbxref=NCBI_GP:TMR45058.1;Name=TMR45058.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446156.1;locus_tag=E3V84_07315;product=glutaredoxin-like protein NrdH;protein_id=TMR45058.1;transl_table=11 SOQE01000073.1 Genbank gene 15525 15788 . + . ID=gene-E3V84_07320;Name=E3V84_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07320 SOQE01000073.1 Protein Homology CDS 15525 15788 . + 0 ID=cds-TMR45059.1;Parent=gene-E3V84_07320;Dbxref=NCBI_GP:TMR45059.1;Name=TMR45059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=E3V84_07320;product=phosphocarrier protein HPr;protein_id=TMR45059.1;transl_table=11 SOQE01000073.1 Genbank gene 15794 17527 . + . ID=gene-E3V84_07325;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=E3V84_07325 SOQE01000073.1 Protein Homology CDS 15794 17527 . + 0 ID=cds-TMR45060.1;Parent=gene-E3V84_07325;Dbxref=NCBI_GP:TMR45060.1;Name=TMR45060.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358656.1;locus_tag=E3V84_07325;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=TMR45060.1;transl_table=11 SOQE01000073.1 Genbank gene 17798 18787 . - . ID=gene-E3V84_07330;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=E3V84_07330 SOQE01000073.1 Protein Homology CDS 17798 18787 . - 0 ID=cds-TMR45061.1;Parent=gene-E3V84_07330;Dbxref=NCBI_GP:TMR45061.1;Name=TMR45061.1;gbkey=CDS;gene=dhaQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446161.1;locus_tag=E3V84_07330;product=DhaKLM operon coactivator DhaQ;protein_id=TMR45061.1;transl_table=11 SOQE01000073.1 Genbank gene 18784 19314 . - . ID=gene-E3V84_07335;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=E3V84_07335 SOQE01000073.1 Protein Homology CDS 18784 19314 . - 0 ID=cds-TMR45062.1;Parent=gene-E3V84_07335;Dbxref=NCBI_GP:TMR45062.1;Name=TMR45062.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446162.1;locus_tag=E3V84_07335;product=dihydroxyacetone kinase transcriptional activator DhaS;protein_id=TMR45062.1;transl_table=11 SOQE01000073.1 Genbank gene 19468 20457 . + . ID=gene-E3V84_07340;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=E3V84_07340 SOQE01000073.1 Protein Homology CDS 19468 20457 . + 0 ID=cds-TMR45063.1;Parent=gene-E3V84_07340;Dbxref=NCBI_GP:TMR45063.1;Name=TMR45063.1;gbkey=CDS;gene=dhaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446163.1;locus_tag=E3V84_07340;product=dihydroxyacetone kinase subunit DhaK;protein_id=TMR45063.1;transl_table=11 SOQE01000073.1 Genbank gene 20479 21054 . + . ID=gene-E3V84_07345;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=E3V84_07345 SOQE01000073.1 Protein Homology CDS 20479 21054 . + 0 ID=cds-TMR45064.1;Parent=gene-E3V84_07345;Dbxref=NCBI_GP:TMR45064.1;Name=TMR45064.1;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446164.1;locus_tag=E3V84_07345;product=dihydroxyacetone kinase subunit L;protein_id=TMR45064.1;transl_table=11 SOQE01000073.1 Genbank gene 21054 21428 . + . ID=gene-E3V84_07350;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=E3V84_07350 SOQE01000073.1 Protein Homology CDS 21054 21428 . + 0 ID=cds-TMR45065.1;Parent=gene-E3V84_07350;Dbxref=NCBI_GP:TMR45065.1;Name=TMR45065.1;gbkey=CDS;gene=dhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_688643.1;locus_tag=E3V84_07350;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=TMR45065.1;transl_table=11 SOQE01000073.1 Genbank gene 21874 22566 . + . ID=gene-E3V84_07355;Name=E3V84_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07355 SOQE01000073.1 Protein Homology CDS 21874 22566 . + 0 ID=cds-TMR45066.1;Parent=gene-E3V84_07355;Dbxref=NCBI_GP:TMR45066.1;Name=TMR45066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446166.1;locus_tag=E3V84_07355;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=TMR45066.1;transl_table=11 SOQE01000073.1 Genbank gene 22628 23281 . + . ID=gene-E3V84_07360;Name=E3V84_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07360 SOQE01000073.1 Protein Homology CDS 22628 23281 . + 0 ID=cds-TMR45067.1;Parent=gene-E3V84_07360;Dbxref=NCBI_GP:TMR45067.1;Name=TMR45067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446167.1;locus_tag=E3V84_07360;product=uracil-DNA glycosylase;protein_id=TMR45067.1;transl_table=11 SOQE01000073.1 Genbank gene 23291 23755 . + . ID=gene-E3V84_07365;Name=E3V84_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07365 SOQE01000073.1 Protein Homology CDS 23291 23755 . + 0 ID=cds-TMR45068.1;Parent=gene-E3V84_07365;Dbxref=NCBI_GP:TMR45068.1;Name=TMR45068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446168.1;locus_tag=E3V84_07365;product=8-oxo-dGTP diphosphatase;protein_id=TMR45068.1;transl_table=11 SOQE01000073.1 Genbank gene 23768 25036 . + . ID=gene-E3V84_07370;Name=E3V84_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07370 SOQE01000073.1 Protein Homology CDS 23768 25036 . + 0 ID=cds-TMR45069.1;Parent=gene-E3V84_07370;Dbxref=NCBI_GP:TMR45069.1;Name=TMR45069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358647.1;locus_tag=E3V84_07370;product=dihydroorotase;protein_id=TMR45069.1;transl_table=11 SOQE01000073.1 Genbank gene 25050 25310 . + . ID=gene-E3V84_07375;Name=E3V84_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07375 SOQE01000073.1 Protein Homology CDS 25050 25310 . + 0 ID=cds-TMR45070.1;Parent=gene-E3V84_07375;Dbxref=NCBI_GP:TMR45070.1;Name=TMR45070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398086.1;locus_tag=E3V84_07375;product=hypothetical protein;protein_id=TMR45070.1;transl_table=11 SOQE01000073.1 Genbank gene 25321 26673 . + . ID=gene-E3V84_07380;Name=pdrM;gbkey=Gene;gene=pdrM;gene_biotype=protein_coding;locus_tag=E3V84_07380 SOQE01000073.1 Protein Homology CDS 25321 26673 . + 0 ID=cds-TMR45071.1;Parent=gene-E3V84_07380;Dbxref=NCBI_GP:TMR45071.1;Name=TMR45071.1;gbkey=CDS;gene=pdrM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446170.1;locus_tag=E3V84_07380;product=sodium-coupled multidrug efflux MATE transporter PdrM;protein_id=TMR45071.1;transl_table=11 SOQE01000073.1 Genbank gene 26876 27946 . - . ID=gene-E3V84_07385;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=E3V84_07385 SOQE01000073.1 Protein Homology CDS 26876 27946 . - 0 ID=cds-TMR45072.1;Parent=gene-E3V84_07385;Dbxref=NCBI_GP:TMR45072.1;Name=TMR45072.1;gbkey=CDS;gene=xerS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446171.1;locus_tag=E3V84_07385;product=tyrosine recombinase XerS;protein_id=TMR45072.1;transl_table=11 SOQE01000073.1 Genbank gene 28092 28346 . - . ID=gene-E3V84_07390;Name=E3V84_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07390 SOQE01000073.1 Protein Homology CDS 28092 28346 . - 0 ID=cds-TMR45073.1;Parent=gene-E3V84_07390;Dbxref=NCBI_GP:TMR45073.1;Name=TMR45073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553826.1;locus_tag=E3V84_07390;product=hypothetical protein;protein_id=TMR45073.1;transl_table=11 SOQE01000073.1 Genbank gene 28554 28642 . - . ID=gene-E3V84_07395;Name=E3V84_07395;end_range=28642,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07395;partial=true SOQE01000073.1 Protein Homology CDS 28554 28642 . - 2 ID=cds-TMR45075.1;Parent=gene-E3V84_07395;Dbxref=NCBI_GP:TMR45075.1;Name=TMR45075.1;end_range=28642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_07395;partial=true;product=IS200/IS605 family transposase;protein_id=TMR45075.1;transl_table=11 ##sequence-region SOQE01000074.1 1 25423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000074.1 Genbank region 1 25423 . + . ID=SOQE01000074.1:1..25423;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000074.1 Genbank gene 1 344 . - . ID=gene-E3V84_07400;Name=E3V84_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07400;partial=true;start_range=.,1 SOQE01000074.1 Protein Homology CDS 1 344 . - 0 ID=cds-TMR45016.1;Parent=gene-E3V84_07400;Dbxref=NCBI_GP:TMR45016.1;Name=TMR45016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_07400;partial=true;product=IS630 family transposase;protein_id=TMR45016.1;start_range=.,1;transl_table=11 SOQE01000074.1 Genbank pseudogene 331 656 . - . ID=gene-E3V84_07405;Name=E3V84_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07405;pseudo=true SOQE01000074.1 Protein Homology CDS 331 656 . - 0 ID=cds-E3V84_07405;Parent=gene-E3V84_07405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_07405;product=transposase;pseudo=true;transl_table=11 SOQE01000074.1 Genbank pseudogene 697 957 . - . ID=gene-E3V84_07410;Name=E3V84_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07410;pseudo=true SOQE01000074.1 Protein Homology CDS 697 957 . - 0 ID=cds-E3V84_07410;Parent=gene-E3V84_07410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445640.1;locus_tag=E3V84_07410;product=PaaI family thioesterase;pseudo=true;transl_table=11 SOQE01000074.1 Genbank gene 1027 2508 . - . ID=gene-E3V84_07415;Name=E3V84_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07415 SOQE01000074.1 Protein Homology CDS 1027 2508 . - 0 ID=cds-TMR45017.1;Parent=gene-E3V84_07415;Dbxref=NCBI_GP:TMR45017.1;Name=TMR45017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359259.1;locus_tag=E3V84_07415;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=TMR45017.1;transl_table=11 SOQE01000074.1 Genbank pseudogene 2527 3603 . - . ID=gene-E3V84_07420;Name=E3V84_07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07420;pseudo=true SOQE01000074.1 Protein Homology CDS 2527 3603 . - 0 ID=cds-E3V84_07420;Parent=gene-E3V84_07420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359260.1;locus_tag=E3V84_07420;product=galactokinase;pseudo=true;transl_table=11 SOQE01000074.1 Genbank gene 3708 4715 . + . ID=gene-E3V84_07425;Name=E3V84_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07425 SOQE01000074.1 Protein Homology CDS 3708 4715 . + 0 ID=cds-TMR45018.1;Parent=gene-E3V84_07425;Dbxref=NCBI_GP:TMR45018.1;Name=TMR45018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359261.1;locus_tag=E3V84_07425;product=LacI family DNA-binding transcriptional regulator;protein_id=TMR45018.1;transl_table=11 SOQE01000074.1 Genbank gene 4761 5798 . - . ID=gene-E3V84_07430;Name=E3V84_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07430 SOQE01000074.1 Protein Homology CDS 4761 5798 . - 0 ID=cds-TMR45019.1;Parent=gene-E3V84_07430;Dbxref=NCBI_GP:TMR45019.1;Name=TMR45019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359262.1;locus_tag=E3V84_07430;product=Zn-dependent alcohol dehydrogenase;protein_id=TMR45019.1;transl_table=11 SOQE01000074.1 Genbank gene 5799 6152 . - . ID=gene-E3V84_07435;Name=E3V84_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07435 SOQE01000074.1 Protein Homology CDS 5799 6152 . - 0 ID=cds-TMR45020.1;Parent=gene-E3V84_07435;Dbxref=NCBI_GP:TMR45020.1;Name=TMR45020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359263.1;locus_tag=E3V84_07435;product=MerR family transcriptional regulator;protein_id=TMR45020.1;transl_table=11 SOQE01000074.1 Genbank gene 6396 7295 . - . ID=gene-E3V84_07440;Name=E3V84_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07440 SOQE01000074.1 Protein Homology CDS 6396 7295 . - 0 ID=cds-TMR45021.1;Parent=gene-E3V84_07440;Dbxref=NCBI_GP:TMR45021.1;Name=TMR45021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359264.1;locus_tag=E3V84_07440;product=cation transporter;protein_id=TMR45021.1;transl_table=11 SOQE01000074.1 Genbank gene 7419 7955 . + . ID=gene-E3V84_07445;Name=E3V84_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07445 SOQE01000074.1 Protein Homology CDS 7419 7955 . + 0 ID=cds-TMR45022.1;Parent=gene-E3V84_07445;Dbxref=NCBI_GP:TMR45022.1;Name=TMR45022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359265.1;locus_tag=E3V84_07445;product=TetR/AcrR family transcriptional regulator;protein_id=TMR45022.1;transl_table=11 SOQE01000074.1 Genbank gene 8121 8930 . - . ID=gene-E3V84_07450;Name=E3V84_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07450 SOQE01000074.1 Protein Homology CDS 8121 8930 . - 0 ID=cds-TMR45023.1;Parent=gene-E3V84_07450;Dbxref=NCBI_GP:TMR45023.1;Name=TMR45023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359266.1;locus_tag=E3V84_07450;product=nicotinamide riboside transporter PnuC;protein_id=TMR45023.1;transl_table=11 SOQE01000074.1 Genbank gene 9272 10792 . - . ID=gene-E3V84_07455;Name=E3V84_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07455 SOQE01000074.1 Protein Homology CDS 9272 10792 . - 0 ID=cds-TMR45024.1;Parent=gene-E3V84_07455;Dbxref=NCBI_GP:TMR45024.1;Name=TMR45024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445634.1;locus_tag=E3V84_07455;product=ABC transporter permease/substrate-binding protein;protein_id=TMR45024.1;transl_table=11 SOQE01000074.1 Genbank gene 10785 11513 . - . ID=gene-E3V84_07460;Name=E3V84_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07460 SOQE01000074.1 Protein Homology CDS 10785 11513 . - 0 ID=cds-TMR45025.1;Parent=gene-E3V84_07460;Dbxref=NCBI_GP:TMR45025.1;Name=TMR45025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359270.1;locus_tag=E3V84_07460;product=ABC transporter ATP-binding protein;protein_id=TMR45025.1;transl_table=11 SOQE01000074.1 Genbank gene 11528 11677 . - . ID=gene-E3V84_07465;Name=E3V84_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07465 SOQE01000074.1 Protein Homology CDS 11528 11677 . - 0 ID=cds-TMR45026.1;Parent=gene-E3V84_07465;Dbxref=NCBI_GP:TMR45026.1;Name=TMR45026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014341.1;locus_tag=E3V84_07465;product=polyketide cyclase;protein_id=TMR45026.1;transl_table=11 SOQE01000074.1 Genbank gene 11754 12197 . - . ID=gene-E3V84_07470;Name=E3V84_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07470 SOQE01000074.1 Protein Homology CDS 11754 12197 . - 0 ID=cds-TMR45027.1;Parent=gene-E3V84_07470;Dbxref=NCBI_GP:TMR45027.1;Name=TMR45027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445632.1;locus_tag=E3V84_07470;product=MarR family transcriptional regulator;protein_id=TMR45027.1;transl_table=11 SOQE01000074.1 Genbank gene 13220 13516 . - . ID=gene-E3V84_07475;Name=E3V84_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07475 SOQE01000074.1 Protein Homology CDS 13220 13516 . - 0 ID=cds-TMR45028.1;Parent=gene-E3V84_07475;Dbxref=NCBI_GP:TMR45028.1;Name=TMR45028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445482.1;locus_tag=E3V84_07475;product=bacteriocin immunity protein;protein_id=TMR45028.1;transl_table=11 SOQE01000074.1 Genbank gene 13536 14600 . - . ID=gene-E3V84_07480;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=E3V84_07480 SOQE01000074.1 Protein Homology CDS 13536 14600 . - 0 ID=cds-TMR45029.1;Parent=gene-E3V84_07480;Dbxref=NCBI_GP:TMR45029.1;Name=TMR45029.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445481.1;locus_tag=E3V84_07480;product=glutamyl aminopeptidase;protein_id=TMR45029.1;transl_table=11 SOQE01000074.1 Genbank gene 14823 15797 . + . ID=gene-E3V84_07485;Name=E3V84_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07485 SOQE01000074.1 Protein Homology CDS 14823 15797 . + 0 ID=cds-TMR45030.1;Parent=gene-E3V84_07485;Dbxref=NCBI_GP:TMR45030.1;Name=TMR45030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013875.1;locus_tag=E3V84_07485;product=ABC transporter permease;protein_id=TMR45030.1;transl_table=11 SOQE01000074.1 Genbank gene 15787 16743 . + . ID=gene-E3V84_07490;Name=E3V84_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07490 SOQE01000074.1 Protein Homology CDS 15787 16743 . + 0 ID=cds-TMR45031.1;Parent=gene-E3V84_07490;Dbxref=NCBI_GP:TMR45031.1;Name=TMR45031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359277.1;locus_tag=E3V84_07490;product=ferrichrome ABC transporter permease;protein_id=TMR45031.1;transl_table=11 SOQE01000074.1 Genbank gene 16740 17492 . + . ID=gene-E3V84_07495;Name=E3V84_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07495 SOQE01000074.1 Protein Homology CDS 16740 17492 . + 0 ID=cds-TMR45032.1;Parent=gene-E3V84_07495;Dbxref=NCBI_GP:TMR45032.1;Name=TMR45032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359278.1;locus_tag=E3V84_07495;product=ATP-binding cassette domain-containing protein;protein_id=TMR45032.1;transl_table=11 SOQE01000074.1 Genbank gene 17588 18559 . + . ID=gene-E3V84_07500;Name=E3V84_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07500 SOQE01000074.1 Protein Homology CDS 17588 18559 . + 0 ID=cds-TMR45033.1;Parent=gene-E3V84_07500;Dbxref=NCBI_GP:TMR45033.1;Name=TMR45033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359279.1;locus_tag=E3V84_07500;product=siderophore ABC transporter substrate-binding protein;protein_id=TMR45033.1;transl_table=11 SOQE01000074.1 Genbank gene 18784 19026 . - . ID=gene-E3V84_07505;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=E3V84_07505 SOQE01000074.1 Protein Homology CDS 18784 19026 . - 0 ID=cds-TMR45034.1;Parent=gene-E3V84_07505;Dbxref=NCBI_GP:TMR45034.1;Name=TMR45034.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359280.1;locus_tag=E3V84_07505;product=membrane protein insertion efficiency factor YidD;protein_id=TMR45034.1;transl_table=11 SOQE01000074.1 Genbank gene 19026 19748 . - . ID=gene-E3V84_07510;Name=E3V84_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07510 SOQE01000074.1 Protein Homology CDS 19026 19748 . - 0 ID=cds-TMR45035.1;Parent=gene-E3V84_07510;Dbxref=NCBI_GP:TMR45035.1;Name=TMR45035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359281.1;locus_tag=E3V84_07510;product=rRNA pseudouridine synthase;protein_id=TMR45035.1;transl_table=11 SOQE01000074.1 Genbank gene 19735 20304 . - . ID=gene-E3V84_07515;Name=E3V84_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07515 SOQE01000074.1 Protein Homology CDS 19735 20304 . - 0 ID=cds-TMR45036.1;Parent=gene-E3V84_07515;Dbxref=NCBI_GP:TMR45036.1;Name=TMR45036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359282.1;locus_tag=E3V84_07515;product=segregation/condensation protein B;protein_id=TMR45036.1;transl_table=11 SOQE01000074.1 Genbank gene 20323 21051 . - . ID=gene-E3V84_07520;Name=E3V84_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07520 SOQE01000074.1 Protein Homology CDS 20323 21051 . - 0 ID=cds-TMR45037.1;Parent=gene-E3V84_07520;Dbxref=NCBI_GP:TMR45037.1;Name=TMR45037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359283.1;locus_tag=E3V84_07520;product=segregation/condensation protein A;protein_id=TMR45037.1;transl_table=11 SOQE01000074.1 Genbank gene 21051 21791 . - . ID=gene-E3V84_07525;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=E3V84_07525 SOQE01000074.1 Protein Homology CDS 21051 21791 . - 0 ID=cds-TMR45038.1;Parent=gene-E3V84_07525;Dbxref=NCBI_GP:TMR45038.1;Name=TMR45038.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445475.1;locus_tag=E3V84_07525;product=site-specific tyrosine recombinase XerD;protein_id=TMR45038.1;transl_table=11 SOQE01000074.1 Genbank gene 21782 22243 . - . ID=gene-E3V84_07530;Name=E3V84_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07530 SOQE01000074.1 Protein Homology CDS 21782 22243 . - 0 ID=cds-TMR45039.1;Parent=gene-E3V84_07530;Dbxref=NCBI_GP:TMR45039.1;Name=TMR45039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445474.1;locus_tag=E3V84_07530;product=CBS domain-containing protein;protein_id=TMR45039.1;transl_table=11 SOQE01000074.1 Genbank gene 22240 22761 . - . ID=gene-E3V84_07535;Name=E3V84_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07535 SOQE01000074.1 Protein Homology CDS 22240 22761 . - 0 ID=cds-TMR45040.1;Parent=gene-E3V84_07535;Dbxref=NCBI_GP:TMR45040.1;Name=TMR45040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445473.1;locus_tag=E3V84_07535;product=metallophosphoesterase;protein_id=TMR45040.1;transl_table=11 SOQE01000074.1 Genbank gene 22737 23708 . - . ID=gene-E3V84_07540;Name=E3V84_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07540 SOQE01000074.1 Protein Homology CDS 22737 23708 . - 0 ID=cds-TMR45041.1;Parent=gene-E3V84_07540;Dbxref=NCBI_GP:TMR45041.1;Name=TMR45041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445472.1;locus_tag=E3V84_07540;product=nucleoside-triphosphate diphosphatase;protein_id=TMR45041.1;transl_table=11 SOQE01000074.1 Genbank gene 23705 24499 . - . ID=gene-E3V84_07545;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=E3V84_07545 SOQE01000074.1 Protein Homology CDS 23705 24499 . - 0 ID=cds-TMR45042.1;Parent=gene-E3V84_07545;Dbxref=NCBI_GP:TMR45042.1;Name=TMR45042.1;gbkey=CDS;gene=racE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359288.1;locus_tag=E3V84_07545;product=glutamate racemase;protein_id=TMR45042.1;transl_table=11 SOQE01000074.1 Genbank gene 24703 24951 . - . ID=gene-E3V84_07550;Name=E3V84_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07550 SOQE01000074.1 Protein Homology CDS 24703 24951 . - 0 ID=cds-TMR45043.1;Parent=gene-E3V84_07550;Dbxref=NCBI_GP:TMR45043.1;Name=TMR45043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445470.1;locus_tag=E3V84_07550;product=YneF family protein;protein_id=TMR45043.1;transl_table=11 SOQE01000074.1 Genbank pseudogene 25131 25423 . + . ID=gene-E3V84_07555;Name=E3V84_07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07555;pseudo=true SOQE01000074.1 Protein Homology CDS 25131 25423 . + 0 ID=cds-E3V84_07555;Parent=gene-E3V84_07555;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_07555;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region SOQE01000075.1 1 1993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000075.1 Genbank region 1 1993 . + . ID=SOQE01000075.1:1..1993;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000075.1 Genbank gene 1 297 . - . ID=gene-E3V84_07560;Name=E3V84_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07560;partial=true;start_range=.,1 SOQE01000075.1 GeneMarkS-2+ CDS 1 297 . - 0 ID=cds-TMR45012.1;Parent=gene-E3V84_07560;Dbxref=NCBI_GP:TMR45012.1;Name=TMR45012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_07560;partial=true;product=hypothetical protein;protein_id=TMR45012.1;start_range=.,1;transl_table=11 SOQE01000075.1 Genbank gene 306 1484 . - . ID=gene-E3V84_07565;Name=E3V84_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07565 SOQE01000075.1 Protein Homology CDS 306 1484 . - 0 ID=cds-TMR45013.1;Parent=gene-E3V84_07565;Dbxref=NCBI_GP:TMR45013.1;Name=TMR45013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=E3V84_07565;product=MFS transporter;protein_id=TMR45013.1;transl_table=11 SOQE01000075.1 Genbank gene 1477 1710 . - . ID=gene-E3V84_07570;Name=E3V84_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07570 SOQE01000075.1 GeneMarkS-2+ CDS 1477 1710 . - 0 ID=cds-TMR45014.1;Parent=gene-E3V84_07570;Dbxref=NCBI_GP:TMR45014.1;Name=TMR45014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_07570;product=hypothetical protein;protein_id=TMR45014.1;transl_table=11 SOQE01000075.1 Genbank gene 1784 1993 . - . ID=gene-E3V84_07575;Name=E3V84_07575;end_range=1993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07575;partial=true SOQE01000075.1 Protein Homology CDS 1784 1993 . - 0 ID=cds-TMR45015.1;Parent=gene-E3V84_07575;Dbxref=NCBI_GP:TMR45015.1;Name=TMR45015.1;end_range=1993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514209.1;locus_tag=E3V84_07575;partial=true;product=transposase;protein_id=TMR45015.1;transl_table=11 ##sequence-region SOQE01000076.1 1 16350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000076.1 Genbank region 1 16350 . + . ID=SOQE01000076.1:1..16350;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000076.1 Genbank pseudogene 243 581 . + . ID=gene-E3V84_07580;Name=E3V84_07580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07580;pseudo=true SOQE01000076.1 Protein Homology CDS 243 581 . + 0 ID=cds-E3V84_07580;Parent=gene-E3V84_07580;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398391.1;locus_tag=E3V84_07580;product=ISNCY family transposase;pseudo=true;transl_table=11 SOQE01000076.1 Genbank pseudogene 563 745 . + . ID=gene-E3V84_07585;Name=E3V84_07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07585;pseudo=true SOQE01000076.1 Protein Homology CDS 563 745 . + 0 ID=cds-E3V84_07585;Parent=gene-E3V84_07585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284773.1;locus_tag=E3V84_07585;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000076.1 Genbank gene 1016 1633 . - . ID=gene-E3V84_07590;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=E3V84_07590 SOQE01000076.1 Protein Homology CDS 1016 1633 . - 0 ID=cds-TMR45000.1;Parent=gene-E3V84_07590;Dbxref=NCBI_GP:TMR45000.1;Name=TMR45000.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046307.1;locus_tag=E3V84_07590;product=potassium-transporting ATPase subunit KdpC;protein_id=TMR45000.1;transl_table=11 SOQE01000076.1 Genbank gene 1758 3827 . - . ID=gene-E3V84_07595;Name=E3V84_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07595 SOQE01000076.1 Protein Homology CDS 1758 3827 . - 0 ID=cds-TMR45001.1;Parent=gene-E3V84_07595;Dbxref=NCBI_GP:TMR45001.1;Name=TMR45001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893144.1;locus_tag=E3V84_07595;product=K(+)-transporting ATPase subunit B;protein_id=TMR45001.1;transl_table=11 SOQE01000076.1 Genbank gene 3836 5581 . - . ID=gene-E3V84_07600;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=E3V84_07600 SOQE01000076.1 Protein Homology CDS 3836 5581 . - 0 ID=cds-TMR45002.1;Parent=gene-E3V84_07600;Dbxref=NCBI_GP:TMR45002.1;Name=TMR45002.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893148.1;locus_tag=E3V84_07600;product=potassium-transporting ATPase subunit KdpA;protein_id=TMR45002.1;transl_table=11 SOQE01000076.1 Genbank gene 5594 5671 . - . ID=gene-E3V84_07605;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=E3V84_07605 SOQE01000076.1 Protein Homology CDS 5594 5671 . - 0 ID=cds-TMR45010.1;Parent=gene-E3V84_07605;Dbxref=NCBI_GP:TMR45010.1;Name=TMR45010.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896418.1;locus_tag=E3V84_07605;product=K(+)-transporting ATPase subunit F;protein_id=TMR45010.1;transl_table=11 SOQE01000076.1 Genbank gene 5971 6696 . - . ID=gene-E3V84_07610;Name=E3V84_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07610 SOQE01000076.1 Protein Homology CDS 5971 6696 . - 0 ID=cds-TMR45003.1;Parent=gene-E3V84_07610;Dbxref=NCBI_GP:TMR45003.1;Name=TMR45003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046299.1;locus_tag=E3V84_07610;product=response regulator transcription factor;protein_id=TMR45003.1;transl_table=11 SOQE01000076.1 Genbank gene 6686 9319 . - . ID=gene-E3V84_07615;Name=E3V84_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07615 SOQE01000076.1 Protein Homology CDS 6686 9319 . - 0 ID=cds-TMR45004.1;Parent=gene-E3V84_07615;Dbxref=NCBI_GP:TMR45004.1;Name=TMR45004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046297.1;locus_tag=E3V84_07615;product=sensor histidine kinase KdpD;protein_id=TMR45004.1;transl_table=11 SOQE01000076.1 Genbank pseudogene 9397 10266 . + . ID=gene-E3V84_07620;Name=E3V84_07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07620;pseudo=true SOQE01000076.1 Protein Homology CDS 9397 10266 . + 0 ID=cds-E3V84_07620;Parent=gene-E3V84_07620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238800.1;locus_tag=E3V84_07620;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQE01000076.1 Genbank gene 10334 11824 . - . ID=gene-E3V84_07625;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=E3V84_07625 SOQE01000076.1 Protein Homology CDS 10334 11824 . - 0 ID=cds-TMR45005.1;Parent=gene-E3V84_07625;Dbxref=NCBI_GP:TMR45005.1;Name=TMR45005.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358220.1;locus_tag=E3V84_07625;product=lysine--tRNA ligase;protein_id=TMR45005.1;transl_table=11 SOQE01000076.1 Genbank gene 12212 12844 . - . ID=gene-E3V84_07630;Name=E3V84_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07630 SOQE01000076.1 Protein Homology CDS 12212 12844 . - 0 ID=cds-TMR45006.1;Parent=gene-E3V84_07630;Dbxref=NCBI_GP:TMR45006.1;Name=TMR45006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397976.1;locus_tag=E3V84_07630;product=orotate phosphoribosyltransferase;protein_id=TMR45006.1;transl_table=11 SOQE01000076.1 Genbank gene 12878 13579 . - . ID=gene-E3V84_07635;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=E3V84_07635 SOQE01000076.1 Protein Homology CDS 12878 13579 . - 0 ID=cds-TMR45007.1;Parent=gene-E3V84_07635;Dbxref=NCBI_GP:TMR45007.1;Name=TMR45007.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358207.1;locus_tag=E3V84_07635;product=orotidine-5'-phosphate decarboxylase;protein_id=TMR45007.1;transl_table=11 SOQE01000076.1 Genbank pseudogene 13898 13990 . + . ID=gene-E3V84_07640;Name=E3V84_07640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07640;pseudo=true SOQE01000076.1 Protein Homology CDS 13898 13990 . + 0 ID=cds-E3V84_07640;Parent=gene-E3V84_07640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516271.1;locus_tag=E3V84_07640;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000076.1 Genbank gene 14325 15038 . - . ID=gene-E3V84_07645;Name=E3V84_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07645 SOQE01000076.1 Protein Homology CDS 14325 15038 . - 0 ID=cds-TMR45008.1;Parent=gene-E3V84_07645;Dbxref=NCBI_GP:TMR45008.1;Name=TMR45008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358205.1;locus_tag=E3V84_07645;product=ABC transporter permease;protein_id=TMR45008.1;transl_table=11 SOQE01000076.1 Genbank gene 15031 15684 . - . ID=gene-E3V84_07650;Name=E3V84_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07650 SOQE01000076.1 Protein Homology CDS 15031 15684 . - 0 ID=cds-TMR45009.1;Parent=gene-E3V84_07650;Dbxref=NCBI_GP:TMR45009.1;Name=TMR45009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529917.1;locus_tag=E3V84_07650;product=ABC transporter ATP-binding protein;protein_id=TMR45009.1;transl_table=11 SOQE01000076.1 Genbank gene 15701 15796 . - . ID=gene-E3V84_07655;Name=E3V84_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07655 SOQE01000076.1 Protein Homology CDS 15701 15796 . - 0 ID=cds-TMR45011.1;Parent=gene-E3V84_07655;Dbxref=NCBI_GP:TMR45011.1;Name=TMR45011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=E3V84_07655;product=ATP-binding cassette domain-containing protein;protein_id=TMR45011.1;transl_table=11 ##sequence-region SOQE01000077.1 1 1051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000077.1 Genbank region 1 1051 . + . ID=SOQE01000077.1:1..1051;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000077.1 Genbank gene 1 665 . + . ID=gene-E3V84_07660;Name=E3V84_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07660;partial=true;start_range=.,1 SOQE01000077.1 Protein Homology CDS 1 665 . + 2 ID=cds-TMR44998.1;Parent=gene-E3V84_07660;Dbxref=NCBI_GP:TMR44998.1;Name=TMR44998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698829.1;locus_tag=E3V84_07660;partial=true;product=hypothetical protein;protein_id=TMR44998.1;start_range=.,1;transl_table=11 SOQE01000077.1 Genbank gene 662 1051 . + . ID=gene-E3V84_07665;Name=E3V84_07665;end_range=1051,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07665;partial=true SOQE01000077.1 Protein Homology CDS 662 1051 . + 0 ID=cds-TMR44999.1;Parent=gene-E3V84_07665;Dbxref=NCBI_GP:TMR44999.1;Name=TMR44999.1;end_range=1051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812983.1;locus_tag=E3V84_07665;partial=true;product=hypothetical protein;protein_id=TMR44999.1;transl_table=11 ##sequence-region SOQE01000078.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000078.1 Genbank region 1 636 . + . ID=SOQE01000078.1:1..636;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000078.1 Genbank gene 1 292 . + . ID=gene-E3V84_07670;Name=E3V84_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07670;partial=true;start_range=.,1 SOQE01000078.1 Protein Homology CDS 1 292 . + 1 ID=cds-TMR44985.1;Parent=gene-E3V84_07670;Dbxref=NCBI_GP:TMR44985.1;Name=TMR44985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237576.1;locus_tag=E3V84_07670;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR44985.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000079.1 1 18888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000079.1 Genbank region 1 18888 . + . ID=SOQE01000079.1:1..18888;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000079.1 Genbank gene 342 2192 . - . ID=gene-E3V84_07675;Name=E3V84_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07675 SOQE01000079.1 Protein Homology CDS 342 2192 . - 0 ID=cds-TMR44962.1;Parent=gene-E3V84_07675;Dbxref=NCBI_GP:TMR44962.1;Name=TMR44962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357686.1;locus_tag=E3V84_07675;product=polysaccharide biosynthesis protein;protein_id=TMR44962.1;transl_table=11 SOQE01000079.1 Genbank gene 2260 3390 . - . ID=gene-E3V84_07680;Name=E3V84_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07680 SOQE01000079.1 Protein Homology CDS 2260 3390 . - 0 ID=cds-TMR44963.1;Parent=gene-E3V84_07680;Dbxref=NCBI_GP:TMR44963.1;Name=TMR44963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096213.1;locus_tag=E3V84_07680;product=glycosyltransferase family 2 protein;protein_id=TMR44963.1;transl_table=11 SOQE01000079.1 Genbank gene 3448 4614 . + . ID=gene-E3V84_07685;Name=E3V84_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07685 SOQE01000079.1 Protein Homology CDS 3448 4614 . + 0 ID=cds-TMR44964.1;Parent=gene-E3V84_07685;Dbxref=NCBI_GP:TMR44964.1;Name=TMR44964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357684.1;locus_tag=E3V84_07685;product=MFS transporter;protein_id=TMR44964.1;transl_table=11 SOQE01000079.1 Genbank gene 4753 5079 . + . ID=gene-E3V84_07690;Name=E3V84_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07690 SOQE01000079.1 Protein Homology CDS 4753 5079 . + 0 ID=cds-TMR44965.1;Parent=gene-E3V84_07690;Dbxref=NCBI_GP:TMR44965.1;Name=TMR44965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357683.1;locus_tag=E3V84_07690;product=PadR family transcriptional regulator;protein_id=TMR44965.1;transl_table=11 SOQE01000079.1 Genbank gene 5066 5659 . + . ID=gene-E3V84_07695;Name=E3V84_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07695 SOQE01000079.1 Protein Homology CDS 5066 5659 . + 0 ID=cds-TMR44966.1;Parent=gene-E3V84_07695;Dbxref=NCBI_GP:TMR44966.1;Name=TMR44966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357682.1;locus_tag=E3V84_07695;product=DUF1700 domain-containing protein;protein_id=TMR44966.1;transl_table=11 SOQE01000079.1 Genbank gene 5652 6563 . + . ID=gene-E3V84_07700;Name=E3V84_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07700 SOQE01000079.1 Protein Homology CDS 5652 6563 . + 0 ID=cds-TMR44967.1;Parent=gene-E3V84_07700;Dbxref=NCBI_GP:TMR44967.1;Name=TMR44967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233690.1;locus_tag=E3V84_07700;product=DUF4097 domain-containing protein;protein_id=TMR44967.1;transl_table=11 SOQE01000079.1 Genbank gene 6625 7689 . + . ID=gene-E3V84_07705;Name=E3V84_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07705 SOQE01000079.1 Protein Homology CDS 6625 7689 . + 0 ID=cds-TMR44968.1;Parent=gene-E3V84_07705;Dbxref=NCBI_GP:TMR44968.1;Name=TMR44968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357680.1;locus_tag=E3V84_07705;product=hypothetical protein;protein_id=TMR44968.1;transl_table=11 SOQE01000079.1 Genbank gene 7912 8772 . - . ID=gene-E3V84_07710;Name=E3V84_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07710 SOQE01000079.1 Protein Homology CDS 7912 8772 . - 0 ID=cds-TMR44969.1;Parent=gene-E3V84_07710;Dbxref=NCBI_GP:TMR44969.1;Name=TMR44969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447085.1;locus_tag=E3V84_07710;product=DUF4299 family protein;protein_id=TMR44969.1;transl_table=11 SOQE01000079.1 Genbank gene 8894 9880 . - . ID=gene-E3V84_07715;Name=E3V84_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07715 SOQE01000079.1 Protein Homology CDS 8894 9880 . - 0 ID=cds-TMR44970.1;Parent=gene-E3V84_07715;Dbxref=NCBI_GP:TMR44970.1;Name=TMR44970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357678.1;locus_tag=E3V84_07715;product=rhodanese-related sulfurtransferase;protein_id=TMR44970.1;transl_table=11 SOQE01000079.1 Genbank gene 9831 10037 . - . ID=gene-E3V84_07720;Name=E3V84_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07720 SOQE01000079.1 Protein Homology CDS 9831 10037 . - 0 ID=cds-TMR44971.1;Parent=gene-E3V84_07720;Dbxref=NCBI_GP:TMR44971.1;Name=TMR44971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809283.1;locus_tag=E3V84_07720;product=hypothetical protein;protein_id=TMR44971.1;transl_table=11 SOQE01000079.1 Genbank pseudogene 10305 10421 . - . ID=gene-E3V84_07725;Name=E3V84_07725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07725;pseudo=true SOQE01000079.1 Protein Homology CDS 10305 10421 . - 0 ID=cds-E3V84_07725;Parent=gene-E3V84_07725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800424.1;locus_tag=E3V84_07725;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQE01000079.1 Genbank gene 10699 11091 . + . ID=gene-E3V84_07730;Name=E3V84_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07730 SOQE01000079.1 Protein Homology CDS 10699 11091 . + 0 ID=cds-TMR44972.1;Parent=gene-E3V84_07730;Dbxref=NCBI_GP:TMR44972.1;Name=TMR44972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183091.1;locus_tag=E3V84_07730;product=hypothetical protein;protein_id=TMR44972.1;transl_table=11 SOQE01000079.1 Genbank gene 11239 12315 . + . ID=gene-E3V84_07735;Name=E3V84_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07735 SOQE01000079.1 Protein Homology CDS 11239 12315 . + 0 ID=cds-TMR44973.1;Parent=gene-E3V84_07735;Dbxref=NCBI_GP:TMR44973.1;Name=TMR44973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760378.1;locus_tag=E3V84_07735;product=hypothetical protein;protein_id=TMR44973.1;transl_table=11 SOQE01000079.1 Genbank gene 12316 13137 . + . ID=gene-E3V84_07740;Name=E3V84_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07740 SOQE01000079.1 Protein Homology CDS 12316 13137 . + 0 ID=cds-TMR44974.1;Parent=gene-E3V84_07740;Dbxref=NCBI_GP:TMR44974.1;Name=TMR44974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698614.1;locus_tag=E3V84_07740;product=beta-carotene 15%2C15'-monooxygenase;protein_id=TMR44974.1;transl_table=11 SOQE01000079.1 Genbank gene 13142 13969 . + . ID=gene-E3V84_07745;Name=E3V84_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07745 SOQE01000079.1 Protein Homology CDS 13142 13969 . + 0 ID=cds-TMR44975.1;Parent=gene-E3V84_07745;Dbxref=NCBI_GP:TMR44975.1;Name=TMR44975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402862.1;locus_tag=E3V84_07745;product=hypothetical protein;protein_id=TMR44975.1;transl_table=11 SOQE01000079.1 Genbank gene 13972 14586 . + . ID=gene-E3V84_07750;Name=E3V84_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07750 SOQE01000079.1 Protein Homology CDS 13972 14586 . + 0 ID=cds-TMR44976.1;Parent=gene-E3V84_07750;Dbxref=NCBI_GP:TMR44976.1;Name=TMR44976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130637.1;locus_tag=E3V84_07750;product=ATP-binding cassette domain-containing protein;protein_id=TMR44976.1;transl_table=11 SOQE01000079.1 Genbank gene 14779 16254 . - . ID=gene-E3V84_07755;Name=E3V84_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07755 SOQE01000079.1 Protein Homology CDS 14779 16254 . - 0 ID=cds-TMR44977.1;Parent=gene-E3V84_07755;Dbxref=NCBI_GP:TMR44977.1;Name=TMR44977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447089.1;locus_tag=E3V84_07755;product=DUF3502 domain-containing protein;protein_id=TMR44977.1;transl_table=11 SOQE01000079.1 Genbank gene 16358 17281 . - . ID=gene-E3V84_07760;Name=E3V84_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07760 SOQE01000079.1 Protein Homology CDS 16358 17281 . - 0 ID=cds-TMR44978.1;Parent=gene-E3V84_07760;Dbxref=NCBI_GP:TMR44978.1;Name=TMR44978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357676.1;locus_tag=E3V84_07760;product=carbohydrate ABC transporter permease;protein_id=TMR44978.1;transl_table=11 SOQE01000079.1 Genbank gene 17295 18224 . - . ID=gene-E3V84_07765;Name=E3V84_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07765 SOQE01000079.1 Protein Homology CDS 17295 18224 . - 0 ID=cds-TMR44979.1;Parent=gene-E3V84_07765;Dbxref=NCBI_GP:TMR44979.1;Name=TMR44979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447091.1;locus_tag=E3V84_07765;product=sugar ABC transporter permease;protein_id=TMR44979.1;transl_table=11 SOQE01000079.1 Genbank gene 18592 18888 . - . ID=gene-E3V84_07770;Name=E3V84_07770;end_range=18888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07770;partial=true SOQE01000079.1 Protein Homology CDS 18592 18888 . - 0 ID=cds-TMR44980.1;Parent=gene-E3V84_07770;Dbxref=NCBI_GP:TMR44980.1;Name=TMR44980.1;end_range=18888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_07770;partial=true;product=transposase;protein_id=TMR44980.1;transl_table=11 ##sequence-region SOQE01000008.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000008.1 Genbank region 1 1292 . + . ID=SOQE01000008.1:1..1292;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000008.1 Genbank gene 1 496 . - . ID=gene-E3V84_00785;Name=E3V84_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00785;partial=true;start_range=.,1 SOQE01000008.1 Protein Homology CDS 1 496 . - 0 ID=cds-TMR48614.1;Parent=gene-E3V84_00785;Dbxref=NCBI_GP:TMR48614.1;Name=TMR48614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105679.1;locus_tag=E3V84_00785;partial=true;product=hypothetical protein;protein_id=TMR48614.1;start_range=.,1;transl_table=11 SOQE01000008.1 Genbank gene 493 699 . - . ID=gene-E3V84_00790;Name=E3V84_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00790 SOQE01000008.1 Protein Homology CDS 493 699 . - 0 ID=cds-TMR48615.1;Parent=gene-E3V84_00790;Dbxref=NCBI_GP:TMR48615.1;Name=TMR48615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368698.1;locus_tag=E3V84_00790;product=hypothetical protein;protein_id=TMR48615.1;transl_table=11 SOQE01000008.1 Genbank gene 692 1292 . - . ID=gene-E3V84_00795;Name=E3V84_00795;end_range=1292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00795;partial=true SOQE01000008.1 Protein Homology CDS 692 1292 . - 1 ID=cds-TMR48616.1;Parent=gene-E3V84_00795;Dbxref=NCBI_GP:TMR48616.1;Name=TMR48616.1;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=E3V84_00795;partial=true;product=tail fiber domain-containing protein;protein_id=TMR48616.1;transl_table=11 ##sequence-region SOQE01000080.1 1 55682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000080.1 Genbank region 1 55682 . + . ID=SOQE01000080.1:1..55682;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000080.1 Genbank gene 1 499 . + . ID=gene-E3V84_07775;Name=E3V84_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07775;partial=true;start_range=.,1 SOQE01000080.1 Protein Homology CDS 1 499 . + 1 ID=cds-TMR44878.1;Parent=gene-E3V84_07775;Dbxref=NCBI_GP:TMR44878.1;Name=TMR44878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=E3V84_07775;partial=true;product=IS1380 family transposase;protein_id=TMR44878.1;start_range=.,1;transl_table=11 SOQE01000080.1 Genbank pseudogene 564 752 . - . ID=gene-E3V84_07780;Name=E3V84_07780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07780;pseudo=true SOQE01000080.1 Protein Homology CDS 564 752 . - 0 ID=cds-E3V84_07780;Parent=gene-E3V84_07780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837104.1;locus_tag=E3V84_07780;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000080.1 Genbank gene 1077 7643 . + . ID=gene-E3V84_07785;Name=E3V84_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07785 SOQE01000080.1 Protein Homology CDS 1077 7643 . + 0 ID=cds-TMR44879.1;Parent=gene-E3V84_07785;Dbxref=NCBI_GP:TMR44879.1;Name=TMR44879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358155.1;locus_tag=E3V84_07785;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR44879.1;transl_table=11 SOQE01000080.1 Genbank gene 8124 8432 . + . ID=gene-E3V84_07790;Name=E3V84_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07790 SOQE01000080.1 Protein Homology CDS 8124 8432 . + 0 ID=cds-TMR44880.1;Parent=gene-E3V84_07790;Dbxref=NCBI_GP:TMR44880.1;Name=TMR44880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445821.1;locus_tag=E3V84_07790;product=hypothetical protein;protein_id=TMR44880.1;transl_table=11 SOQE01000080.1 Genbank gene 8402 8512 . - . ID=gene-E3V84_07795;Name=E3V84_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07795 SOQE01000080.1 Protein Homology CDS 8402 8512 . - 0 ID=cds-TMR44919.1;Parent=gene-E3V84_07795;Dbxref=NCBI_GP:TMR44919.1;Name=TMR44919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V84_07795;product=lysyl-tRNA synthetase;protein_id=TMR44919.1;transl_table=11 SOQE01000080.1 Genbank gene 8729 9226 . + . ID=gene-E3V84_07800;Name=E3V84_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07800 SOQE01000080.1 Protein Homology CDS 8729 9226 . + 0 ID=cds-TMR44881.1;Parent=gene-E3V84_07800;Dbxref=NCBI_GP:TMR44881.1;Name=TMR44881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446134.1;locus_tag=E3V84_07800;product=PTS sugar transporter subunit IIA;protein_id=TMR44881.1;transl_table=11 SOQE01000080.1 Genbank gene 9264 9569 . + . ID=gene-E3V84_07805;Name=E3V84_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07805 SOQE01000080.1 Protein Homology CDS 9264 9569 . + 0 ID=cds-TMR44882.1;Parent=gene-E3V84_07805;Dbxref=NCBI_GP:TMR44882.1;Name=TMR44882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358157.1;locus_tag=E3V84_07805;product=PTS sugar transporter subunit IIB;protein_id=TMR44882.1;transl_table=11 SOQE01000080.1 Genbank gene 9617 11092 . + . ID=gene-E3V84_07810;Name=E3V84_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07810 SOQE01000080.1 Protein Homology CDS 9617 11092 . + 0 ID=cds-TMR44883.1;Parent=gene-E3V84_07810;Dbxref=NCBI_GP:TMR44883.1;Name=TMR44883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358158.1;locus_tag=E3V84_07810;product=PTS galactitol transporter subunit IIC;protein_id=TMR44883.1;transl_table=11 SOQE01000080.1 Genbank pseudogene 11214 11279 . + . ID=gene-E3V84_07815;Name=E3V84_07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07815;pseudo=true SOQE01000080.1 Protein Homology CDS 11214 11279 . + 0 ID=cds-E3V84_07815;Parent=gene-E3V84_07815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V84_07815;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000080.1 Genbank gene 11583 18284 . + . ID=gene-E3V84_07820;Name=E3V84_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07820 SOQE01000080.1 Protein Homology CDS 11583 18284 . + 0 ID=cds-TMR44884.1;Parent=gene-E3V84_07820;Dbxref=NCBI_GP:TMR44884.1;Name=TMR44884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358159.1;locus_tag=E3V84_07820;product=DUF4982 domain-containing protein;protein_id=TMR44884.1;transl_table=11 SOQE01000080.1 Genbank gene 18532 19530 . - . ID=gene-E3V84_07825;Name=E3V84_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07825 SOQE01000080.1 Protein Homology CDS 18532 19530 . - 0 ID=cds-TMR44885.1;Parent=gene-E3V84_07825;Dbxref=NCBI_GP:TMR44885.1;Name=TMR44885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125496.1;locus_tag=E3V84_07825;product=DDE transposase;protein_id=TMR44885.1;transl_table=11 SOQE01000080.1 Genbank gene 19744 20103 . - . ID=gene-E3V84_07830;Name=E3V84_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07830 SOQE01000080.1 Protein Homology CDS 19744 20103 . - 0 ID=cds-TMR44886.1;Parent=gene-E3V84_07830;Dbxref=NCBI_GP:TMR44886.1;Name=TMR44886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358162.1;locus_tag=E3V84_07830;product=DUF3397 domain-containing protein;protein_id=TMR44886.1;transl_table=11 SOQE01000080.1 Genbank gene 20027 20704 . + . ID=gene-E3V84_07835;Name=E3V84_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07835 SOQE01000080.1 Protein Homology CDS 20027 20704 . + 0 ID=cds-TMR44887.1;Parent=gene-E3V84_07835;Dbxref=NCBI_GP:TMR44887.1;Name=TMR44887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358163.1;locus_tag=E3V84_07835;product=TIGR01212 family radical SAM protein;protein_id=TMR44887.1;transl_table=11 SOQE01000080.1 Genbank gene 20705 21151 . + . ID=gene-E3V84_07840;Name=E3V84_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07840 SOQE01000080.1 Protein Homology CDS 20705 21151 . + 0 ID=cds-TMR44888.1;Parent=gene-E3V84_07840;Dbxref=NCBI_GP:TMR44888.1;Name=TMR44888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397999.1;locus_tag=E3V84_07840;product=radical SAM protein;protein_id=TMR44888.1;transl_table=11 SOQE01000080.1 Genbank gene 21129 21692 . + . ID=gene-E3V84_07845;Name=E3V84_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07845 SOQE01000080.1 Protein Homology CDS 21129 21692 . + 0 ID=cds-TMR44889.1;Parent=gene-E3V84_07845;Dbxref=NCBI_GP:TMR44889.1;Name=TMR44889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358165.1;locus_tag=E3V84_07845;product=methyltransferase domain-containing protein;protein_id=TMR44889.1;transl_table=11 SOQE01000080.1 Genbank gene 21685 21939 . + . ID=gene-E3V84_07850;Name=E3V84_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07850 SOQE01000080.1 Protein Homology CDS 21685 21939 . + 0 ID=cds-TMR44890.1;Parent=gene-E3V84_07850;Dbxref=NCBI_GP:TMR44890.1;Name=TMR44890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358166.1;locus_tag=E3V84_07850;product=hypothetical protein;protein_id=TMR44890.1;transl_table=11 SOQE01000080.1 Genbank gene 21951 24005 . + . ID=gene-E3V84_07855;Name=E3V84_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07855 SOQE01000080.1 Protein Homology CDS 21951 24005 . + 0 ID=cds-TMR44891.1;Parent=gene-E3V84_07855;Dbxref=NCBI_GP:TMR44891.1;Name=TMR44891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358167.1;locus_tag=E3V84_07855;product=sodium:proton antiporter;protein_id=TMR44891.1;transl_table=11 SOQE01000080.1 Genbank gene 24169 25044 . + . ID=gene-E3V84_07860;Name=E3V84_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07860 SOQE01000080.1 Protein Homology CDS 24169 25044 . + 0 ID=cds-TMR44892.1;Parent=gene-E3V84_07860;Dbxref=NCBI_GP:TMR44892.1;Name=TMR44892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358168.1;locus_tag=E3V84_07860;product=YihY/virulence factor BrkB family protein;protein_id=TMR44892.1;transl_table=11 SOQE01000080.1 Genbank gene 25254 25964 . + . ID=gene-E3V84_07865;Name=E3V84_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07865 SOQE01000080.1 Protein Homology CDS 25254 25964 . + 0 ID=cds-TMR44893.1;Parent=gene-E3V84_07865;Dbxref=NCBI_GP:TMR44893.1;Name=TMR44893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358169.1;locus_tag=E3V84_07865;product=cytochrome c biogenesis protein CcdA;protein_id=TMR44893.1;transl_table=11 SOQE01000080.1 Genbank gene 25984 26550 . + . ID=gene-E3V84_07870;Name=E3V84_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07870 SOQE01000080.1 Protein Homology CDS 25984 26550 . + 0 ID=cds-TMR44894.1;Parent=gene-E3V84_07870;Dbxref=NCBI_GP:TMR44894.1;Name=TMR44894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759281.1;locus_tag=E3V84_07870;product=redoxin domain-containing protein;protein_id=TMR44894.1;transl_table=11 SOQE01000080.1 Genbank gene 26561 27673 . + . ID=gene-E3V84_07875;Name=E3V84_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07875 SOQE01000080.1 Protein Homology CDS 26561 27673 . + 0 ID=cds-TMR44895.1;Parent=gene-E3V84_07875;Dbxref=NCBI_GP:TMR44895.1;Name=TMR44895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358171.1;locus_tag=E3V84_07875;product=peptide-methionine (R)-S-oxide reductase;protein_id=TMR44895.1;transl_table=11 SOQE01000080.1 Genbank gene 28011 28748 . + . ID=gene-E3V84_07880;Name=E3V84_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07880 SOQE01000080.1 Protein Homology CDS 28011 28748 . + 0 ID=cds-TMR44896.1;Parent=gene-E3V84_07880;Dbxref=NCBI_GP:TMR44896.1;Name=TMR44896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446587.1;locus_tag=E3V84_07880;product=response regulator transcription factor;protein_id=TMR44896.1;transl_table=11 SOQE01000080.1 Genbank gene 28745 30436 . + . ID=gene-E3V84_07885;Name=E3V84_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07885 SOQE01000080.1 Protein Homology CDS 28745 30436 . + 0 ID=cds-TMR44897.1;Parent=gene-E3V84_07885;Dbxref=NCBI_GP:TMR44897.1;Name=TMR44897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358173.1;locus_tag=E3V84_07885;product=sensor histidine kinase;protein_id=TMR44897.1;transl_table=11 SOQE01000080.1 Genbank gene 30530 31114 . + . ID=gene-E3V84_07890;Name=E3V84_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07890 SOQE01000080.1 Protein Homology CDS 30530 31114 . + 0 ID=cds-TMR44898.1;Parent=gene-E3V84_07890;Dbxref=NCBI_GP:TMR44898.1;Name=TMR44898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446585.1;locus_tag=E3V84_07890;product=TIGR01440 family protein;protein_id=TMR44898.1;transl_table=11 SOQE01000080.1 Genbank gene 31136 38347 . + . ID=gene-E3V84_07895;Name=E3V84_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07895 SOQE01000080.1 Protein Homology CDS 31136 38347 . + 0 ID=cds-TMR44899.1;Parent=gene-E3V84_07895;Dbxref=NCBI_GP:TMR44899.1;Name=TMR44899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473020.1;locus_tag=E3V84_07895;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR44899.1;transl_table=11 SOQE01000080.1 Genbank gene 38421 40142 . + . ID=gene-E3V84_07900;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=E3V84_07900 SOQE01000080.1 Protein Homology CDS 38421 40142 . + 0 ID=cds-TMR44900.1;Parent=gene-E3V84_07900;Dbxref=NCBI_GP:TMR44900.1;Name=TMR44900.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358176.1;locus_tag=E3V84_07900;product=aminodeoxychorismate synthase component I;protein_id=TMR44900.1;transl_table=11 SOQE01000080.1 Genbank gene 40143 40760 . + . ID=gene-E3V84_07905;Name=E3V84_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07905 SOQE01000080.1 Protein Homology CDS 40143 40760 . + 0 ID=cds-TMR44901.1;Parent=gene-E3V84_07905;Dbxref=NCBI_GP:TMR44901.1;Name=TMR44901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446582.1;locus_tag=E3V84_07905;product=alpha/beta hydrolase;protein_id=TMR44901.1;transl_table=11 SOQE01000080.1 Genbank gene 40810 42177 . + . ID=gene-E3V84_07910;Name=E3V84_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07910 SOQE01000080.1 Protein Homology CDS 40810 42177 . + 0 ID=cds-TMR44902.1;Parent=gene-E3V84_07910;Dbxref=NCBI_GP:TMR44902.1;Name=TMR44902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361341.1;locus_tag=E3V84_07910;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMR44902.1;transl_table=11 SOQE01000080.1 Genbank gene 42282 43241 . + . ID=gene-E3V84_07915;Name=E3V84_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07915 SOQE01000080.1 Protein Homology CDS 42282 43241 . + 0 ID=cds-TMR44903.1;Parent=gene-E3V84_07915;Dbxref=NCBI_GP:TMR44903.1;Name=TMR44903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446580.1;locus_tag=E3V84_07915;product=ROK family glucokinase;protein_id=TMR44903.1;transl_table=11 SOQE01000080.1 Genbank gene 43338 44177 . + . ID=gene-E3V84_07920;Name=E3V84_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07920 SOQE01000080.1 Protein Homology CDS 43338 44177 . + 0 ID=cds-TMR44904.1;Parent=gene-E3V84_07920;Dbxref=NCBI_GP:TMR44904.1;Name=TMR44904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011065.1;locus_tag=E3V84_07920;product=thymidylate synthase;protein_id=TMR44904.1;transl_table=11 SOQE01000080.1 Genbank gene 44391 44561 . - . ID=gene-E3V84_07925;Name=E3V84_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07925 SOQE01000080.1 Protein Homology CDS 44391 44561 . - 0 ID=cds-TMR44905.1;Parent=gene-E3V84_07925;Dbxref=NCBI_GP:TMR44905.1;Name=TMR44905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358180.1;locus_tag=E3V84_07925;product=DUF3042 family protein;protein_id=TMR44905.1;transl_table=11 SOQE01000080.1 Genbank gene 44682 45566 . + . ID=gene-E3V84_07930;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=E3V84_07930 SOQE01000080.1 Protein Homology CDS 44682 45566 . + 0 ID=cds-TMR44906.1;Parent=gene-E3V84_07930;Dbxref=NCBI_GP:TMR44906.1;Name=TMR44906.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446577.1;locus_tag=E3V84_07930;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=TMR44906.1;transl_table=11 SOQE01000080.1 Genbank gene 45559 46797 . + . ID=gene-E3V84_07935;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=E3V84_07935 SOQE01000080.1 Protein Homology CDS 45559 46797 . + 0 ID=cds-TMR44907.1;Parent=gene-E3V84_07935;Dbxref=NCBI_GP:TMR44907.1;Name=TMR44907.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446576.1;locus_tag=E3V84_07935;product=GTPase HflX;protein_id=TMR44907.1;transl_table=11 SOQE01000080.1 Genbank gene 46790 47413 . + . ID=gene-E3V84_07940;Name=E3V84_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07940 SOQE01000080.1 Protein Homology CDS 46790 47413 . + 0 ID=cds-TMR44908.1;Parent=gene-E3V84_07940;Dbxref=NCBI_GP:TMR44908.1;Name=TMR44908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446575.1;locus_tag=E3V84_07940;product=cystathionine beta-lyase;protein_id=TMR44908.1;transl_table=11 SOQE01000080.1 Genbank gene 47428 48357 . + . ID=gene-E3V84_07945;Name=E3V84_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07945 SOQE01000080.1 Protein Homology CDS 47428 48357 . + 0 ID=cds-TMR44909.1;Parent=gene-E3V84_07945;Dbxref=NCBI_GP:TMR44909.1;Name=TMR44909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358185.1;locus_tag=E3V84_07945;product=ribonuclease Z;protein_id=TMR44909.1;transl_table=11 SOQE01000080.1 Genbank gene 48378 49133 . + . ID=gene-E3V84_07950;Name=E3V84_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07950 SOQE01000080.1 Protein Homology CDS 48378 49133 . + 0 ID=cds-TMR44910.1;Parent=gene-E3V84_07950;Dbxref=NCBI_GP:TMR44910.1;Name=TMR44910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446573.1;locus_tag=E3V84_07950;product=SDR family oxidoreductase;protein_id=TMR44910.1;transl_table=11 SOQE01000080.1 Genbank gene 49188 50096 . - . ID=gene-E3V84_07955;Name=E3V84_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07955 SOQE01000080.1 Protein Homology CDS 49188 50096 . - 0 ID=cds-TMR44911.1;Parent=gene-E3V84_07955;Dbxref=NCBI_GP:TMR44911.1;Name=TMR44911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446563.1;locus_tag=E3V84_07955;product=LysR family transcriptional regulator;protein_id=TMR44911.1;transl_table=11 SOQE01000080.1 Genbank gene 50208 50429 . + . ID=gene-E3V84_07960;Name=E3V84_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07960 SOQE01000080.1 Protein Homology CDS 50208 50429 . + 0 ID=cds-TMR44912.1;Parent=gene-E3V84_07960;Dbxref=NCBI_GP:TMR44912.1;Name=TMR44912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446558.1;locus_tag=E3V84_07960;product=DUF910 family protein;protein_id=TMR44912.1;transl_table=11 SOQE01000080.1 Genbank gene 50429 50809 . + . ID=gene-E3V84_07965;Name=E3V84_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07965 SOQE01000080.1 Protein Homology CDS 50429 50809 . + 0 ID=cds-TMR44913.1;Parent=gene-E3V84_07965;Dbxref=NCBI_GP:TMR44913.1;Name=TMR44913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358189.1;locus_tag=E3V84_07965;product=rhodanese-like domain-containing protein;protein_id=TMR44913.1;transl_table=11 SOQE01000080.1 Genbank gene 50896 51129 . + . ID=gene-E3V84_07970;Name=E3V84_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07970 SOQE01000080.1 Protein Homology CDS 50896 51129 . + 0 ID=cds-TMR44914.1;Parent=gene-E3V84_07970;Dbxref=NCBI_GP:TMR44914.1;Name=TMR44914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088017.1;locus_tag=E3V84_07970;product=DUF4190 domain-containing protein;protein_id=TMR44914.1;transl_table=11 SOQE01000080.1 Genbank gene 51171 51896 . - . ID=gene-E3V84_07975;Name=E3V84_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07975 SOQE01000080.1 Protein Homology CDS 51171 51896 . - 0 ID=cds-TMR44915.1;Parent=gene-E3V84_07975;Dbxref=NCBI_GP:TMR44915.1;Name=TMR44915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358191.1;locus_tag=E3V84_07975;product=16S rRNA pseudouridine(516) synthase;protein_id=TMR44915.1;transl_table=11 SOQE01000080.1 Genbank gene 52056 53897 . + . ID=gene-E3V84_07980;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=E3V84_07980 SOQE01000080.1 Protein Homology CDS 52056 53897 . + 0 ID=cds-TMR44916.1;Parent=gene-E3V84_07980;Dbxref=NCBI_GP:TMR44916.1;Name=TMR44916.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446555.1;locus_tag=E3V84_07980;product=translational GTPase TypA;protein_id=TMR44916.1;transl_table=11 SOQE01000080.1 Genbank gene 53917 54171 . + . ID=gene-E3V84_07985;Name=E3V84_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07985 SOQE01000080.1 Protein Homology CDS 53917 54171 . + 0 ID=cds-TMR44917.1;Parent=gene-E3V84_07985;Dbxref=NCBI_GP:TMR44917.1;Name=TMR44917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358193.1;locus_tag=E3V84_07985;product=DUF3165 family protein;protein_id=TMR44917.1;transl_table=11 SOQE01000080.1 Genbank gene 54438 55604 . - . ID=gene-E3V84_07990;Name=E3V84_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_07990 SOQE01000080.1 Protein Homology CDS 54438 55604 . - 0 ID=cds-TMR44918.1;Parent=gene-E3V84_07990;Dbxref=NCBI_GP:TMR44918.1;Name=TMR44918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704683.1;locus_tag=E3V84_07990;product=site-specific integrase;protein_id=TMR44918.1;transl_table=11 ##sequence-region SOQE01000081.1 1 589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000081.1 Genbank region 1 589 . + . ID=SOQE01000081.1:1..589;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000081.1 Genbank pseudogene 1 589 . - . ID=gene-E3V84_07995;Name=E3V84_07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_07995;pseudo=true SOQE01000081.1 Protein Homology CDS 1 589 . - 2 ID=cds-E3V84_07995;Parent=gene-E3V84_07995;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_07995;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000082.1 1 883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000082.1 Genbank region 1 883 . + . ID=SOQE01000082.1:1..883;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000082.1 Genbank gene 112 876 . - . ID=gene-E3V84_08000;Name=E3V84_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08000 SOQE01000082.1 Protein Homology CDS 112 876 . - 0 ID=cds-TMR44877.1;Parent=gene-E3V84_08000;Dbxref=NCBI_GP:TMR44877.1;Name=TMR44877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=E3V84_08000;product=growth inhibitor PemK;protein_id=TMR44877.1;transl_table=11 ##sequence-region SOQE01000083.1 1 41039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000083.1 Genbank region 1 41039 . + . ID=SOQE01000083.1:1..41039;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000083.1 Genbank gene 1 61 . - . ID=gene-E3V84_08005;Name=E3V84_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08005;partial=true;start_range=.,1 SOQE01000083.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR44725.1;Parent=gene-E3V84_08005;Dbxref=NCBI_GP:TMR44725.1;Name=TMR44725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_08005;partial=true;product=IS200/IS605 family transposase;protein_id=TMR44725.1;start_range=.,1;transl_table=11 SOQE01000083.1 Genbank gene 517 1398 . - . ID=gene-E3V84_08010;Name=E3V84_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08010 SOQE01000083.1 Protein Homology CDS 517 1398 . - 0 ID=cds-TMR44694.1;Parent=gene-E3V84_08010;Dbxref=NCBI_GP:TMR44694.1;Name=TMR44694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=E3V84_08010;product=fructose-bisphosphate aldolase;protein_id=TMR44694.1;transl_table=11 SOQE01000083.1 Genbank gene 1539 2867 . - . ID=gene-E3V84_08015;Name=E3V84_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08015 SOQE01000083.1 Protein Homology CDS 1539 2867 . - 0 ID=cds-TMR44695.1;Parent=gene-E3V84_08015;Dbxref=NCBI_GP:TMR44695.1;Name=TMR44695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358123.1;locus_tag=E3V84_08015;product=HAMP domain-containing histidine kinase;protein_id=TMR44695.1;transl_table=11 SOQE01000083.1 Genbank gene 2864 3520 . - . ID=gene-E3V84_08020;Name=E3V84_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08020 SOQE01000083.1 Protein Homology CDS 2864 3520 . - 0 ID=cds-TMR44696.1;Parent=gene-E3V84_08020;Dbxref=NCBI_GP:TMR44696.1;Name=TMR44696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445809.1;locus_tag=E3V84_08020;product=response regulator transcription factor;protein_id=TMR44696.1;transl_table=11 SOQE01000083.1 Genbank gene 3800 4561 . - . ID=gene-E3V84_08025;Name=E3V84_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08025 SOQE01000083.1 Protein Homology CDS 3800 4561 . - 0 ID=cds-TMR44697.1;Parent=gene-E3V84_08025;Dbxref=NCBI_GP:TMR44697.1;Name=TMR44697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284985.1;locus_tag=E3V84_08025;product=hypothetical protein;protein_id=TMR44697.1;transl_table=11 SOQE01000083.1 Genbank gene 4524 6452 . - . ID=gene-E3V84_08030;Name=E3V84_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08030 SOQE01000083.1 Protein Homology CDS 4524 6452 . - 0 ID=cds-TMR44698.1;Parent=gene-E3V84_08030;Dbxref=NCBI_GP:TMR44698.1;Name=TMR44698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250146.1;locus_tag=E3V84_08030;product=LysM peptidoglycan-binding domain-containing protein;protein_id=TMR44698.1;transl_table=11 SOQE01000083.1 Genbank gene 6750 8129 . - . ID=gene-E3V84_08035;Name=E3V84_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08035 SOQE01000083.1 Protein Homology CDS 6750 8129 . - 0 ID=cds-TMR44699.1;Parent=gene-E3V84_08035;Dbxref=NCBI_GP:TMR44699.1;Name=TMR44699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358120.1;locus_tag=E3V84_08035;product=ABC transporter permease;protein_id=TMR44699.1;transl_table=11 SOQE01000083.1 Genbank gene 8185 8832 . - . ID=gene-E3V84_08040;Name=E3V84_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08040 SOQE01000083.1 Protein Homology CDS 8185 8832 . - 0 ID=cds-TMR44700.1;Parent=gene-E3V84_08040;Dbxref=NCBI_GP:TMR44700.1;Name=TMR44700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358119.1;locus_tag=E3V84_08040;product=ABC transporter ATP-binding protein;protein_id=TMR44700.1;transl_table=11 SOQE01000083.1 Genbank gene 8845 10122 . - . ID=gene-E3V84_08045;Name=E3V84_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08045 SOQE01000083.1 Protein Homology CDS 8845 10122 . - 0 ID=cds-TMR44701.1;Parent=gene-E3V84_08045;Dbxref=NCBI_GP:TMR44701.1;Name=TMR44701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358118.1;locus_tag=E3V84_08045;product=ABC transporter permease;protein_id=TMR44701.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 10324 10431 . - . ID=gene-E3V84_08050;Name=E3V84_08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08050;pseudo=true SOQE01000083.1 Protein Homology CDS 10324 10431 . - 0 ID=cds-E3V84_08050;Parent=gene-E3V84_08050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=E3V84_08050;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 10425 10775 . - . ID=gene-E3V84_08055;Name=E3V84_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08055 SOQE01000083.1 Protein Homology CDS 10425 10775 . - 0 ID=cds-TMR44702.1;Parent=gene-E3V84_08055;Dbxref=NCBI_GP:TMR44702.1;Name=TMR44702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_08055;product=IS66 family insertion sequence hypothetical protein;protein_id=TMR44702.1;transl_table=11 SOQE01000083.1 Genbank gene 11112 13997 . - . ID=gene-E3V84_08060;Name=E3V84_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08060 SOQE01000083.1 Protein Homology CDS 11112 13997 . - 0 ID=cds-TMR44703.1;Parent=gene-E3V84_08060;Dbxref=NCBI_GP:TMR44703.1;Name=TMR44703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=E3V84_08060;product=YSIRK-type signal peptide-containing protein;protein_id=TMR44703.1;transl_table=11 SOQE01000083.1 Genbank gene 14105 14356 . - . ID=gene-E3V84_08065;Name=E3V84_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08065 SOQE01000083.1 Protein Homology CDS 14105 14356 . - 0 ID=cds-TMR44704.1;Parent=gene-E3V84_08065;Dbxref=NCBI_GP:TMR44704.1;Name=TMR44704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598576.1;locus_tag=E3V84_08065;product=hypothetical protein;protein_id=TMR44704.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 14676 15132 . - . ID=gene-E3V84_08070;Name=E3V84_08070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08070;pseudo=true SOQE01000083.1 Protein Homology CDS 14676 15132 . - 0 ID=cds-E3V84_08070;Parent=gene-E3V84_08070;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186956.1;locus_tag=E3V84_08070;product=DUF4231 domain-containing protein;pseudo=true;transl_table=11 SOQE01000083.1 Genbank pseudogene 15228 16028 . - . ID=gene-E3V84_08075;Name=E3V84_08075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08075;pseudo=true SOQE01000083.1 Protein Homology CDS 15228 16028 . - 0 ID=cds-E3V84_08075;Parent=gene-E3V84_08075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_08075;product=IS5 family transposase;pseudo=true;transl_table=11 SOQE01000083.1 Genbank pseudogene 16285 16479 . + . ID=gene-E3V84_08080;Name=E3V84_08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08080;pseudo=true SOQE01000083.1 Protein Homology CDS 16285 16479 . + 0 ID=cds-E3V84_08080;Parent=gene-E3V84_08080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_08080;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 16502 16711 . - . ID=gene-E3V84_08085;Name=E3V84_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08085 SOQE01000083.1 Protein Homology CDS 16502 16711 . - 0 ID=cds-TMR44705.1;Parent=gene-E3V84_08085;Dbxref=NCBI_GP:TMR44705.1;Name=TMR44705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856983.1;locus_tag=E3V84_08085;product=hypothetical protein;protein_id=TMR44705.1;transl_table=11 SOQE01000083.1 Genbank gene 16612 17496 . - . ID=gene-E3V84_08090;Name=E3V84_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08090 SOQE01000083.1 Protein Homology CDS 16612 17496 . - 0 ID=cds-TMR44706.1;Parent=gene-E3V84_08090;Dbxref=NCBI_GP:TMR44706.1;Name=TMR44706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358115.1;locus_tag=E3V84_08090;product=PucR family transcriptional regulator;protein_id=TMR44706.1;transl_table=11 SOQE01000083.1 Genbank gene 17500 17886 . - . ID=gene-E3V84_08095;Name=E3V84_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08095 SOQE01000083.1 Protein Homology CDS 17500 17886 . - 0 ID=cds-TMR44707.1;Parent=gene-E3V84_08095;Dbxref=NCBI_GP:TMR44707.1;Name=TMR44707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446696.1;locus_tag=E3V84_08095;product=Mini-ribonuclease 3;protein_id=TMR44707.1;transl_table=11 SOQE01000083.1 Genbank gene 17879 19222 . - . ID=gene-E3V84_08100;Name=E3V84_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08100 SOQE01000083.1 Protein Homology CDS 17879 19222 . - 0 ID=cds-TMR44708.1;Parent=gene-E3V84_08100;Dbxref=NCBI_GP:TMR44708.1;Name=TMR44708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446697.1;locus_tag=E3V84_08100;product=cysteine--tRNA ligase;protein_id=TMR44708.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 19112 19362 . + . ID=gene-E3V84_08105;Name=E3V84_08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08105;pseudo=true SOQE01000083.1 Protein Homology CDS 19112 19362 . + 0 ID=cds-E3V84_08105;Parent=gene-E3V84_08105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822012.1;locus_tag=E3V84_08105;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 19304 20188 . - . ID=gene-E3V84_08110;Name=E3V84_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08110 SOQE01000083.1 Protein Homology CDS 19304 20188 . - 0 ID=cds-TMR44709.1;Parent=gene-E3V84_08110;Dbxref=NCBI_GP:TMR44709.1;Name=TMR44709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446698.1;locus_tag=E3V84_08110;product=GNAT family N-acetyltransferase;protein_id=TMR44709.1;transl_table=11 SOQE01000083.1 Genbank gene 20200 20817 . - . ID=gene-E3V84_08115;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=E3V84_08115 SOQE01000083.1 Protein Homology CDS 20200 20817 . - 0 ID=cds-TMR44710.1;Parent=gene-E3V84_08115;Dbxref=NCBI_GP:TMR44710.1;Name=TMR44710.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358111.1;locus_tag=E3V84_08115;product=serine O-acetyltransferase;protein_id=TMR44710.1;transl_table=11 SOQE01000083.1 Genbank gene 20833 23046 . - . ID=gene-E3V84_08120;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=E3V84_08120 SOQE01000083.1 Protein Homology CDS 20833 23046 . - 0 ID=cds-TMR44711.1;Parent=gene-E3V84_08120;Dbxref=NCBI_GP:TMR44711.1;Name=TMR44711.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446700.1;locus_tag=E3V84_08120;product=polyribonucleotide nucleotidyltransferase;protein_id=TMR44711.1;transl_table=11 SOQE01000083.1 Genbank gene 23153 23371 . + . ID=gene-E3V84_08125;Name=E3V84_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08125 SOQE01000083.1 Protein Homology CDS 23153 23371 . + 0 ID=cds-TMR44712.1;Parent=gene-E3V84_08125;Dbxref=NCBI_GP:TMR44712.1;Name=TMR44712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811622.1;locus_tag=E3V84_08125;product=hypothetical protein;protein_id=TMR44712.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 23395 23610 . + . ID=gene-E3V84_08130;Name=E3V84_08130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08130;pseudo=true SOQE01000083.1 Protein Homology CDS 23395 23610 . + 0 ID=cds-E3V84_08130;Parent=gene-E3V84_08130;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811622.1;locus_tag=E3V84_08130;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 24126 24992 . - . ID=gene-E3V84_08135;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=E3V84_08135 SOQE01000083.1 Protein Homology CDS 24126 24992 . - 0 ID=cds-TMR44713.1;Parent=gene-E3V84_08135;Dbxref=NCBI_GP:TMR44713.1;Name=TMR44713.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446701.1;locus_tag=E3V84_08135;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=TMR44713.1;transl_table=11 SOQE01000083.1 Genbank gene 25086 27335 . - . ID=gene-E3V84_08140;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=E3V84_08140 SOQE01000083.1 Protein Homology CDS 25086 27335 . - 0 ID=cds-TMR44714.1;Parent=gene-E3V84_08140;Dbxref=NCBI_GP:TMR44714.1;Name=TMR44714.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446702.1;locus_tag=E3V84_08140;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TMR44714.1;transl_table=11 SOQE01000083.1 Genbank gene 27614 27730 . - . ID=gene-E3V84_08145;Name=E3V84_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08145 SOQE01000083.1 Protein Homology CDS 27614 27730 . - 0 ID=cds-TMR44715.1;Parent=gene-E3V84_08145;Dbxref=NCBI_GP:TMR44715.1;Name=TMR44715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=E3V84_08145;product=chlorohydrolase;protein_id=TMR44715.1;transl_table=11 SOQE01000083.1 Genbank gene 27751 28017 . - . ID=gene-E3V84_08150;Name=E3V84_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08150 SOQE01000083.1 Protein Homology CDS 27751 28017 . - 0 ID=cds-TMR44716.1;Parent=gene-E3V84_08150;Dbxref=NCBI_GP:TMR44716.1;Name=TMR44716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358107.1;locus_tag=E3V84_08150;product=XRE family transcriptional regulator;protein_id=TMR44716.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 28101 28586 . - . ID=gene-E3V84_08155;Name=E3V84_08155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08155;pseudo=true SOQE01000083.1 Protein Homology CDS 28101 28586 . - 0 ID=cds-E3V84_08155;Parent=gene-E3V84_08155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_08155;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 28742 29743 . + . ID=gene-E3V84_08160;Name=E3V84_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08160 SOQE01000083.1 Protein Homology CDS 28742 29743 . + 0 ID=cds-TMR44717.1;Parent=gene-E3V84_08160;Dbxref=NCBI_GP:TMR44717.1;Name=TMR44717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358104.1;locus_tag=E3V84_08160;product=endonuclease/exonuclease/phosphatase family protein;protein_id=TMR44717.1;transl_table=11 SOQE01000083.1 Genbank gene 29965 32370 . - . ID=gene-E3V84_08165;Name=E3V84_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08165 SOQE01000083.1 Protein Homology CDS 29965 32370 . - 0 ID=cds-TMR44718.1;Parent=gene-E3V84_08165;Dbxref=NCBI_GP:TMR44718.1;Name=TMR44718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446901.1;locus_tag=E3V84_08165;product=phenylalanine--tRNA ligase subunit beta;protein_id=TMR44718.1;transl_table=11 SOQE01000083.1 Genbank gene 32447 32956 . - . ID=gene-E3V84_08170;Name=E3V84_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08170 SOQE01000083.1 Protein Homology CDS 32447 32956 . - 0 ID=cds-TMR44719.1;Parent=gene-E3V84_08170;Dbxref=NCBI_GP:TMR44719.1;Name=TMR44719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358102.1;locus_tag=E3V84_08170;product=N-acetyltransferase;protein_id=TMR44719.1;transl_table=11 SOQE01000083.1 Genbank gene 32956 34002 . - . ID=gene-E3V84_08175;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=E3V84_08175 SOQE01000083.1 Protein Homology CDS 32956 34002 . - 0 ID=cds-TMR44720.1;Parent=gene-E3V84_08175;Dbxref=NCBI_GP:TMR44720.1;Name=TMR44720.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358101.2;locus_tag=E3V84_08175;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TMR44720.1;transl_table=11 SOQE01000083.1 Genbank gene 34594 36009 . - . ID=gene-E3V84_08180;Name=E3V84_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08180 SOQE01000083.1 Protein Homology CDS 34594 36009 . - 0 ID=cds-TMR44721.1;Parent=gene-E3V84_08180;Dbxref=NCBI_GP:TMR44721.1;Name=TMR44721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358100.1;locus_tag=E3V84_08180;product=glycoside hydrolase family 1 protein;protein_id=TMR44721.1;transl_table=11 SOQE01000083.1 Genbank gene 36022 37860 . - . ID=gene-E3V84_08185;Name=E3V84_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08185 SOQE01000083.1 Protein Homology CDS 36022 37860 . - 0 ID=cds-TMR44722.1;Parent=gene-E3V84_08185;Dbxref=NCBI_GP:TMR44722.1;Name=TMR44722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358099.1;locus_tag=E3V84_08185;product=PTS beta-glucoside transporter subunit EIIBCA;protein_id=TMR44722.1;transl_table=11 SOQE01000083.1 Genbank gene 37878 38717 . - . ID=gene-E3V84_08190;Name=E3V84_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08190 SOQE01000083.1 Protein Homology CDS 37878 38717 . - 0 ID=cds-TMR44723.1;Parent=gene-E3V84_08190;Dbxref=NCBI_GP:TMR44723.1;Name=TMR44723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358098.1;locus_tag=E3V84_08190;product=PRD domain-containing protein;protein_id=TMR44723.1;transl_table=11 SOQE01000083.1 Genbank pseudogene 39017 39343 . - . ID=gene-E3V84_08195;Name=E3V84_08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08195;pseudo=true SOQE01000083.1 Protein Homology CDS 39017 39343 . - 0 ID=cds-E3V84_08195;Parent=gene-E3V84_08195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445534.1;locus_tag=E3V84_08195;product=RNA helicase;pseudo=true;transl_table=11 SOQE01000083.1 Genbank gene 39369 40802 . - . ID=gene-E3V84_08200;Name=E3V84_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08200 SOQE01000083.1 Protein Homology CDS 39369 40802 . - 0 ID=cds-TMR44724.1;Parent=gene-E3V84_08200;Dbxref=NCBI_GP:TMR44724.1;Name=TMR44724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860193.1;locus_tag=E3V84_08200;product=DEAD/DEAH box helicase;protein_id=TMR44724.1;transl_table=11 SOQE01000083.1 Genbank gene 40951 41039 . - . ID=gene-E3V84_08205;Name=E3V84_08205;end_range=41039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08205;partial=true SOQE01000083.1 Protein Homology CDS 40951 41039 . - 2 ID=cds-TMR44726.1;Parent=gene-E3V84_08205;Dbxref=NCBI_GP:TMR44726.1;Name=TMR44726.1;end_range=41039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_08205;partial=true;product=IS200/IS605 family transposase;protein_id=TMR44726.1;transl_table=11 ##sequence-region SOQE01000084.1 1 17664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000084.1 Genbank region 1 17664 . + . ID=SOQE01000084.1:1..17664;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000084.1 Genbank gene 1 1234 . - . ID=gene-E3V84_08210;Name=E3V84_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08210;partial=true;start_range=.,1 SOQE01000084.1 Protein Homology CDS 1 1234 . - 0 ID=cds-TMR44625.1;Parent=gene-E3V84_08210;Dbxref=NCBI_GP:TMR44625.1;Name=TMR44625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=E3V84_08210;partial=true;product=hypothetical protein;protein_id=TMR44625.1;start_range=.,1;transl_table=11 SOQE01000084.1 Genbank gene 1239 1589 . - . ID=gene-E3V84_08215;Name=E3V84_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08215 SOQE01000084.1 Protein Homology CDS 1239 1589 . - 0 ID=cds-TMR44626.1;Parent=gene-E3V84_08215;Dbxref=NCBI_GP:TMR44626.1;Name=TMR44626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399159.1;locus_tag=E3V84_08215;product=hypothetical protein;protein_id=TMR44626.1;transl_table=11 SOQE01000084.1 Genbank gene 1598 3625 . - . ID=gene-E3V84_08220;Name=E3V84_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08220 SOQE01000084.1 Protein Homology CDS 1598 3625 . - 0 ID=cds-TMR44646.1;Parent=gene-E3V84_08220;Dbxref=NCBI_GP:TMR44646.1;Name=TMR44646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001852057.1;locus_tag=E3V84_08220;product=hypothetical protein;protein_id=TMR44646.1;transl_table=11 SOQE01000084.1 Genbank pseudogene 4944 5489 . - . ID=gene-E3V84_08225;Name=E3V84_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08225;pseudo=true SOQE01000084.1 Protein Homology CDS 4944 5489 . - 0 ID=cds-E3V84_08225;Parent=gene-E3V84_08225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212172.1;locus_tag=E3V84_08225;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000084.1 Genbank gene 5476 5826 . - . ID=gene-E3V84_08230;Name=E3V84_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08230 SOQE01000084.1 Protein Homology CDS 5476 5826 . - 0 ID=cds-TMR44627.1;Parent=gene-E3V84_08230;Dbxref=NCBI_GP:TMR44627.1;Name=TMR44627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478007.1;locus_tag=E3V84_08230;product=hypothetical protein;protein_id=TMR44627.1;transl_table=11 SOQE01000084.1 Genbank gene 5865 6245 . - . ID=gene-E3V84_08235;Name=E3V84_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08235 SOQE01000084.1 Protein Homology CDS 5865 6245 . - 0 ID=cds-TMR44628.1;Parent=gene-E3V84_08235;Dbxref=NCBI_GP:TMR44628.1;Name=TMR44628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185634.1;locus_tag=E3V84_08235;product=hypothetical protein;protein_id=TMR44628.1;transl_table=11 SOQE01000084.1 Genbank gene 6250 6663 . - . ID=gene-E3V84_08240;Name=E3V84_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08240 SOQE01000084.1 Protein Homology CDS 6250 6663 . - 0 ID=cds-TMR44629.1;Parent=gene-E3V84_08240;Dbxref=NCBI_GP:TMR44629.1;Name=TMR44629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880678.1;locus_tag=E3V84_08240;product=phage tail protein;protein_id=TMR44629.1;transl_table=11 SOQE01000084.1 Genbank gene 6666 7034 . - . ID=gene-E3V84_08245;Name=E3V84_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08245 SOQE01000084.1 Protein Homology CDS 6666 7034 . - 0 ID=cds-TMR44630.1;Parent=gene-E3V84_08245;Dbxref=NCBI_GP:TMR44630.1;Name=TMR44630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608233.1;locus_tag=E3V84_08245;product=hypothetical protein;protein_id=TMR44630.1;transl_table=11 SOQE01000084.1 Genbank gene 7031 7546 . - . ID=gene-E3V84_08250;Name=E3V84_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08250 SOQE01000084.1 Protein Homology CDS 7031 7546 . - 0 ID=cds-TMR44631.1;Parent=gene-E3V84_08250;Dbxref=NCBI_GP:TMR44631.1;Name=TMR44631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284942.1;locus_tag=E3V84_08250;product=HK97 gp10 family phage protein;protein_id=TMR44631.1;transl_table=11 SOQE01000084.1 Genbank gene 7521 7859 . - . ID=gene-E3V84_08255;Name=E3V84_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08255 SOQE01000084.1 Protein Homology CDS 7521 7859 . - 0 ID=cds-TMR44632.1;Parent=gene-E3V84_08255;Dbxref=NCBI_GP:TMR44632.1;Name=TMR44632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478943.1;locus_tag=E3V84_08255;product=hypothetical protein;protein_id=TMR44632.1;transl_table=11 SOQE01000084.1 Genbank gene 7840 8151 . - . ID=gene-E3V84_08260;Name=E3V84_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08260 SOQE01000084.1 Protein Homology CDS 7840 8151 . - 0 ID=cds-TMR44633.1;Parent=gene-E3V84_08260;Dbxref=NCBI_GP:TMR44633.1;Name=TMR44633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866508.1;locus_tag=E3V84_08260;product=phage head-tail adapter protein;protein_id=TMR44633.1;transl_table=11 SOQE01000084.1 Genbank gene 8153 8341 . - . ID=gene-E3V84_08265;Name=E3V84_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08265 SOQE01000084.1 Protein Homology CDS 8153 8341 . - 0 ID=cds-TMR44634.1;Parent=gene-E3V84_08265;Dbxref=NCBI_GP:TMR44634.1;Name=TMR44634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669348.1;locus_tag=E3V84_08265;product=hypothetical protein;protein_id=TMR44634.1;transl_table=11 SOQE01000084.1 Genbank gene 8331 8513 . - . ID=gene-E3V84_08270;Name=E3V84_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08270 SOQE01000084.1 Protein Homology CDS 8331 8513 . - 0 ID=cds-TMR44635.1;Parent=gene-E3V84_08270;Dbxref=NCBI_GP:TMR44635.1;Name=TMR44635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054935.1;locus_tag=E3V84_08270;product=Rho termination protein;protein_id=TMR44635.1;transl_table=11 SOQE01000084.1 Genbank gene 8525 9367 . - . ID=gene-E3V84_08275;Name=E3V84_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08275 SOQE01000084.1 Protein Homology CDS 8525 9367 . - 0 ID=cds-TMR44636.1;Parent=gene-E3V84_08275;Dbxref=NCBI_GP:TMR44636.1;Name=TMR44636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123892.1;locus_tag=E3V84_08275;product=N4-gp56 family major capsid protein;protein_id=TMR44636.1;transl_table=11 SOQE01000084.1 Genbank gene 9373 9942 . - . ID=gene-E3V84_08280;Name=E3V84_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08280 SOQE01000084.1 Protein Homology CDS 9373 9942 . - 0 ID=cds-TMR44637.1;Parent=gene-E3V84_08280;Dbxref=NCBI_GP:TMR44637.1;Name=TMR44637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001559.1;locus_tag=E3V84_08280;product=DUF4355 domain-containing protein;protein_id=TMR44637.1;transl_table=11 SOQE01000084.1 Genbank gene 10232 11728 . - . ID=gene-E3V84_08285;Name=E3V84_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08285 SOQE01000084.1 Protein Homology CDS 10232 11728 . - 0 ID=cds-TMR44647.1;Parent=gene-E3V84_08285;Dbxref=NCBI_GP:TMR44647.1;Name=TMR44647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861581.1;locus_tag=E3V84_08285;product=phage head morphogenesis protein;protein_id=TMR44647.1;transl_table=11 SOQE01000084.1 Genbank pseudogene 11691 12146 . - . ID=gene-E3V84_08290;Name=E3V84_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08290;pseudo=true SOQE01000084.1 Protein Homology CDS 11691 12146 . - 0 ID=cds-E3V84_08290;Parent=gene-E3V84_08290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854690.1;locus_tag=E3V84_08290;product=phage portal protein;pseudo=true;transl_table=11 SOQE01000084.1 Genbank gene 12358 12891 . - . ID=gene-E3V84_08295;Name=E3V84_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08295 SOQE01000084.1 Protein Homology CDS 12358 12891 . - 0 ID=cds-TMR44638.1;Parent=gene-E3V84_08295;Dbxref=NCBI_GP:TMR44638.1;Name=TMR44638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588570.1;locus_tag=E3V84_08295;product=hypothetical protein;protein_id=TMR44638.1;transl_table=11 SOQE01000084.1 Genbank gene 13020 14039 . - . ID=gene-E3V84_08300;Name=E3V84_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08300 SOQE01000084.1 Protein Homology CDS 13020 14039 . - 0 ID=cds-TMR44639.1;Parent=gene-E3V84_08300;Dbxref=NCBI_GP:TMR44639.1;Name=TMR44639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866505.1;locus_tag=E3V84_08300;product=phage portal protein;protein_id=TMR44639.1;transl_table=11 SOQE01000084.1 Genbank gene 14051 15265 . - . ID=gene-E3V84_08305;Name=E3V84_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08305 SOQE01000084.1 Protein Homology CDS 14051 15265 . - 0 ID=cds-TMR44640.1;Parent=gene-E3V84_08305;Dbxref=NCBI_GP:TMR44640.1;Name=TMR44640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182317.1;locus_tag=E3V84_08305;product=PBSX family phage terminase large subunit;protein_id=TMR44640.1;transl_table=11 SOQE01000084.1 Genbank gene 15255 15749 . - . ID=gene-E3V84_08310;Name=E3V84_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08310 SOQE01000084.1 Protein Homology CDS 15255 15749 . - 0 ID=cds-TMR44641.1;Parent=gene-E3V84_08310;Dbxref=NCBI_GP:TMR44641.1;Name=TMR44641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351060.1;locus_tag=E3V84_08310;product=terminase small subunit;protein_id=TMR44641.1;transl_table=11 SOQE01000084.1 Genbank gene 15808 15878 . - . ID=gene-E3V84_08315;Name=E3V84_08315;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_08315 SOQE01000084.1 tRNAscan-SE tRNA 15808 15878 . - . ID=rna-E3V84_08315;Parent=gene-E3V84_08315;anticodon=(pos:complement(15844..15846));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_08315;product=tRNA-Trp SOQE01000084.1 tRNAscan-SE exon 15808 15878 . - . ID=exon-E3V84_08315-1;Parent=rna-E3V84_08315;anticodon=(pos:complement(15844..15846));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_08315;product=tRNA-Trp SOQE01000084.1 Genbank gene 16361 16789 . - . ID=gene-E3V84_08320;Name=E3V84_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08320 SOQE01000084.1 Protein Homology CDS 16361 16789 . - 0 ID=cds-TMR44642.1;Parent=gene-E3V84_08320;Dbxref=NCBI_GP:TMR44642.1;Name=TMR44642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=E3V84_08320;product=transcriptional regulator;protein_id=TMR44642.1;transl_table=11 SOQE01000084.1 Genbank gene 16919 17134 . + . ID=gene-E3V84_08325;Name=E3V84_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08325 SOQE01000084.1 Protein Homology CDS 16919 17134 . + 0 ID=cds-TMR44643.1;Parent=gene-E3V84_08325;Dbxref=NCBI_GP:TMR44643.1;Name=TMR44643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445580.1;locus_tag=E3V84_08325;product=AbrB family transcriptional regulator;protein_id=TMR44643.1;transl_table=11 SOQE01000084.1 Genbank gene 17118 17471 . + . ID=gene-E3V84_08330;Name=E3V84_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08330 SOQE01000084.1 Protein Homology CDS 17118 17471 . + 0 ID=cds-TMR44644.1;Parent=gene-E3V84_08330;Dbxref=NCBI_GP:TMR44644.1;Name=TMR44644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445579.1;locus_tag=E3V84_08330;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=TMR44644.1;transl_table=11 SOQE01000084.1 Genbank gene 17492 17664 . - . ID=gene-E3V84_08335;Name=E3V84_08335;end_range=17664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08335;partial=true SOQE01000084.1 Protein Homology CDS 17492 17664 . - 2 ID=cds-TMR44645.1;Parent=gene-E3V84_08335;Dbxref=NCBI_GP:TMR44645.1;Name=TMR44645.1;end_range=17664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067624.1;locus_tag=E3V84_08335;partial=true;product=DUF3310 domain-containing protein;protein_id=TMR44645.1;transl_table=11 ##sequence-region SOQE01000085.1 1 104468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000085.1 Genbank region 1 104468 . + . ID=SOQE01000085.1:1..104468;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000085.1 Genbank pseudogene 1 329 . + . ID=gene-E3V84_08340;Name=E3V84_08340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08340;pseudo=true SOQE01000085.1 Protein Homology CDS 1 329 . + 2 ID=cds-E3V84_08340;Parent=gene-E3V84_08340;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_08340;product=IS630 family transposase;pseudo=true;transl_table=11 SOQE01000085.1 Genbank gene 747 2066 . - . ID=gene-E3V84_08345;Name=E3V84_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08345 SOQE01000085.1 Protein Homology CDS 747 2066 . - 0 ID=cds-TMR44521.1;Parent=gene-E3V84_08345;Dbxref=NCBI_GP:TMR44521.1;Name=TMR44521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358758.1;locus_tag=E3V84_08345;product=uracil permease;protein_id=TMR44521.1;transl_table=11 SOQE01000085.1 Genbank gene 2333 3046 . - . ID=gene-E3V84_08350;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=E3V84_08350 SOQE01000085.1 Protein Homology CDS 2333 3046 . - 0 ID=cds-TMR44522.1;Parent=gene-E3V84_08350;Dbxref=NCBI_GP:TMR44522.1;Name=TMR44522.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446353.1;locus_tag=E3V84_08350;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=TMR44522.1;transl_table=11 SOQE01000085.1 Genbank gene 3140 3700 . + . ID=gene-E3V84_08355;Name=E3V84_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08355 SOQE01000085.1 Protein Homology CDS 3140 3700 . + 0 ID=cds-TMR44523.1;Parent=gene-E3V84_08355;Dbxref=NCBI_GP:TMR44523.1;Name=TMR44523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358756.1;locus_tag=E3V84_08355;product=LemA family protein;protein_id=TMR44523.1;transl_table=11 SOQE01000085.1 Genbank gene 3702 4601 . + . ID=gene-E3V84_08360;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=E3V84_08360 SOQE01000085.1 Protein Homology CDS 3702 4601 . + 0 ID=cds-TMR44524.1;Parent=gene-E3V84_08360;Dbxref=NCBI_GP:TMR44524.1;Name=TMR44524.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446351.1;locus_tag=E3V84_08360;product=zinc metalloprotease HtpX;protein_id=TMR44524.1;transl_table=11 SOQE01000085.1 Genbank gene 4749 6275 . - . ID=gene-E3V84_08365;Name=E3V84_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08365 SOQE01000085.1 Protein Homology CDS 4749 6275 . - 0 ID=cds-TMR44525.1;Parent=gene-E3V84_08365;Dbxref=NCBI_GP:TMR44525.1;Name=TMR44525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358754.1;locus_tag=E3V84_08365;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=TMR44525.1;transl_table=11 SOQE01000085.1 Genbank gene 6900 7442 . + . ID=gene-E3V84_08370;Name=E3V84_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08370 SOQE01000085.1 Protein Homology CDS 6900 7442 . + 0 ID=cds-TMR44526.1;Parent=gene-E3V84_08370;Dbxref=NCBI_GP:TMR44526.1;Name=TMR44526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358751.1;locus_tag=E3V84_08370;product=DUF177 domain-containing protein;protein_id=TMR44526.1;transl_table=11 SOQE01000085.1 Genbank gene 7442 8071 . + . ID=gene-E3V84_08375;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=E3V84_08375 SOQE01000085.1 Protein Homology CDS 7442 8071 . + 0 ID=cds-TMR44527.1;Parent=gene-E3V84_08375;Dbxref=NCBI_GP:TMR44527.1;Name=TMR44527.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358750.1;locus_tag=E3V84_08375;product=endonuclease III;protein_id=TMR44527.1;transl_table=11 SOQE01000085.1 Genbank gene 8282 8803 . + . ID=gene-E3V84_08380;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=E3V84_08380 SOQE01000085.1 Protein Homology CDS 8282 8803 . + 0 ID=cds-TMR44528.1;Parent=gene-E3V84_08380;Dbxref=NCBI_GP:TMR44528.1;Name=TMR44528.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358749.1;locus_tag=E3V84_08380;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=TMR44528.1;transl_table=11 SOQE01000085.1 Genbank gene 8822 9745 . + . ID=gene-E3V84_08385;Name=E3V84_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08385 SOQE01000085.1 Protein Homology CDS 8822 9745 . + 0 ID=cds-TMR44529.1;Parent=gene-E3V84_08385;Dbxref=NCBI_GP:TMR44529.1;Name=TMR44529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446345.1;locus_tag=E3V84_08385;product=aspartate carbamoyltransferase catalytic subunit;protein_id=TMR44529.1;transl_table=11 SOQE01000085.1 Genbank gene 9795 10874 . + . ID=gene-E3V84_08390;Name=E3V84_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08390 SOQE01000085.1 Protein Homology CDS 9795 10874 . + 0 ID=cds-TMR44530.1;Parent=gene-E3V84_08390;Dbxref=NCBI_GP:TMR44530.1;Name=TMR44530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358747.1;locus_tag=E3V84_08390;product=carbamoyl-phosphate synthase small subunit;protein_id=TMR44530.1;transl_table=11 SOQE01000085.1 Genbank gene 11323 14499 . + . ID=gene-E3V84_08395;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=E3V84_08395 SOQE01000085.1 Protein Homology CDS 11323 14499 . + 0 ID=cds-TMR44531.1;Parent=gene-E3V84_08395;Dbxref=NCBI_GP:TMR44531.1;Name=TMR44531.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446343.1;locus_tag=E3V84_08395;product=carbamoyl-phosphate synthase large subunit;protein_id=TMR44531.1;transl_table=11 SOQE01000085.1 Genbank gene 14569 15378 . - . ID=gene-E3V84_08400;Name=E3V84_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08400 SOQE01000085.1 Protein Homology CDS 14569 15378 . - 0 ID=cds-TMR44532.1;Parent=gene-E3V84_08400;Dbxref=NCBI_GP:TMR44532.1;Name=TMR44532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358745.1;locus_tag=E3V84_08400;product=phosphorylcholine transferase LicD;protein_id=TMR44532.1;transl_table=11 SOQE01000085.1 Genbank gene 15380 16183 . - . ID=gene-E3V84_08405;Name=E3V84_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08405 SOQE01000085.1 Protein Homology CDS 15380 16183 . - 0 ID=cds-TMR44533.1;Parent=gene-E3V84_08405;Dbxref=NCBI_GP:TMR44533.1;Name=TMR44533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358744.1;locus_tag=E3V84_08405;product=phosphorylcholine transferase LicD;protein_id=TMR44533.1;transl_table=11 SOQE01000085.1 Genbank gene 16193 17680 . - . ID=gene-E3V84_08410;Name=tacF;gbkey=Gene;gene=tacF;gene_biotype=protein_coding;locus_tag=E3V84_08410 SOQE01000085.1 Protein Homology CDS 16193 17680 . - 0 ID=cds-TMR44534.1;Parent=gene-E3V84_08410;Dbxref=NCBI_GP:TMR44534.1;Name=TMR44534.1;gbkey=CDS;gene=tacF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358743.1;locus_tag=E3V84_08410;product=type IV teichoic acid flippase;protein_id=TMR44534.1;transl_table=11 SOQE01000085.1 Genbank gene 18016 18723 . + . ID=gene-E3V84_08415;Name=E3V84_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08415 SOQE01000085.1 Protein Homology CDS 18016 18723 . + 0 ID=cds-TMR44535.1;Parent=gene-E3V84_08415;Dbxref=NCBI_GP:TMR44535.1;Name=TMR44535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358742.1;locus_tag=E3V84_08415;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TMR44535.1;transl_table=11 SOQE01000085.1 Genbank gene 18728 19750 . + . ID=gene-E3V84_08420;Name=E3V84_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08420 SOQE01000085.1 Protein Homology CDS 18728 19750 . + 0 ID=cds-TMR44536.1;Parent=gene-E3V84_08420;Dbxref=NCBI_GP:TMR44536.1;Name=TMR44536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446337.1;locus_tag=E3V84_08420;product=ribitol-5-phosphate dehydrogenase;protein_id=TMR44536.1;transl_table=11 SOQE01000085.1 Genbank gene 19767 20636 . + . ID=gene-E3V84_08425;Name=E3V84_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08425 SOQE01000085.1 Protein Homology CDS 19767 20636 . + 0 ID=cds-TMR44537.1;Parent=gene-E3V84_08425;Dbxref=NCBI_GP:TMR44537.1;Name=TMR44537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358740.1;locus_tag=E3V84_08425;product=choline kinase;protein_id=TMR44537.1;transl_table=11 SOQE01000085.1 Genbank gene 20626 21504 . + . ID=gene-E3V84_08430;Name=E3V84_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08430 SOQE01000085.1 Protein Homology CDS 20626 21504 . + 0 ID=cds-TMR44538.1;Parent=gene-E3V84_08430;Dbxref=NCBI_GP:TMR44538.1;Name=TMR44538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446335.1;locus_tag=E3V84_08430;product=DMT family transporter;protein_id=TMR44538.1;transl_table=11 SOQE01000085.1 Genbank gene 21516 22205 . + . ID=gene-E3V84_08435;Name=E3V84_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08435 SOQE01000085.1 Protein Homology CDS 21516 22205 . + 0 ID=cds-TMR44539.1;Parent=gene-E3V84_08435;Dbxref=NCBI_GP:TMR44539.1;Name=TMR44539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446334.1;locus_tag=E3V84_08435;product=CTP--phosphocholine cytidylyltransferase;protein_id=TMR44539.1;transl_table=11 SOQE01000085.1 Genbank gene 22303 23151 . + . ID=gene-E3V84_08440;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=E3V84_08440 SOQE01000085.1 Protein Homology CDS 22303 23151 . + 0 ID=cds-TMR44540.1;Parent=gene-E3V84_08440;Dbxref=NCBI_GP:TMR44540.1;Name=TMR44540.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446333.1;locus_tag=E3V84_08440;product=DNA-protecting protein DprA;protein_id=TMR44540.1;transl_table=11 SOQE01000085.1 Genbank gene 23921 24964 . + . ID=gene-E3V84_08445;Name=E3V84_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08445 SOQE01000085.1 Protein Homology CDS 23921 24964 . + 0 ID=cds-TMR44541.1;Parent=gene-E3V84_08445;Dbxref=NCBI_GP:TMR44541.1;Name=TMR44541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358735.1;locus_tag=E3V84_08445;product=TIGR00341 family protein;protein_id=TMR44541.1;transl_table=11 SOQE01000085.1 Genbank gene 25130 27217 . + . ID=gene-E3V84_08450;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=E3V84_08450 SOQE01000085.1 Protein Homology CDS 25130 27217 . + 0 ID=cds-TMR44542.1;Parent=gene-E3V84_08450;Dbxref=NCBI_GP:TMR44542.1;Name=TMR44542.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446332.1;locus_tag=E3V84_08450;product=type I DNA topoisomerase;protein_id=TMR44542.1;transl_table=11 SOQE01000085.1 Genbank gene 27323 27682 . + . ID=gene-E3V84_08455;Name=E3V84_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08455 SOQE01000085.1 Protein Homology CDS 27323 27682 . + 0 ID=cds-TMR44543.1;Parent=gene-E3V84_08455;Dbxref=NCBI_GP:TMR44543.1;Name=TMR44543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446331.1;locus_tag=E3V84_08455;product=DUF454 domain-containing protein;protein_id=TMR44543.1;transl_table=11 SOQE01000085.1 Genbank gene 27776 28408 . + . ID=gene-E3V84_08460;Name=E3V84_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08460 SOQE01000085.1 Protein Homology CDS 27776 28408 . + 0 ID=cds-TMR44544.1;Parent=gene-E3V84_08460;Dbxref=NCBI_GP:TMR44544.1;Name=TMR44544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358732.1;locus_tag=E3V84_08460;product=copper homeostasis protein CutC;protein_id=TMR44544.1;transl_table=11 SOQE01000085.1 Genbank gene 28452 29108 . + . ID=gene-E3V84_08465;Name=E3V84_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08465 SOQE01000085.1 Protein Homology CDS 28452 29108 . + 0 ID=cds-TMR44545.1;Parent=gene-E3V84_08465;Dbxref=NCBI_GP:TMR44545.1;Name=TMR44545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446329.1;locus_tag=E3V84_08465;product=MmcQ/YjbR family DNA-binding protein;protein_id=TMR44545.1;transl_table=11 SOQE01000085.1 Genbank gene 29423 30985 . + . ID=gene-E3V84_08470;Name=E3V84_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08470 SOQE01000085.1 Protein Homology CDS 29423 30985 . + 0 ID=cds-TMR44546.1;Parent=gene-E3V84_08470;Dbxref=NCBI_GP:TMR44546.1;Name=TMR44546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446328.1;locus_tag=E3V84_08470;product=2-isopropylmalate synthase;protein_id=TMR44546.1;transl_table=11 SOQE01000085.1 Genbank gene 30997 32034 . + . ID=gene-E3V84_08475;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=E3V84_08475 SOQE01000085.1 Protein Homology CDS 30997 32034 . + 0 ID=cds-TMR44547.1;Parent=gene-E3V84_08475;Dbxref=NCBI_GP:TMR44547.1;Name=TMR44547.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446327.1;locus_tag=E3V84_08475;product=3-isopropylmalate dehydrogenase;protein_id=TMR44547.1;transl_table=11 SOQE01000085.1 Genbank gene 32031 32300 . + . ID=gene-E3V84_08480;Name=E3V84_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08480 SOQE01000085.1 Protein Homology CDS 32031 32300 . + 0 ID=cds-TMR44548.1;Parent=gene-E3V84_08480;Dbxref=NCBI_GP:TMR44548.1;Name=TMR44548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358727.1;locus_tag=E3V84_08480;product=DUF1294 domain-containing protein;protein_id=TMR44548.1;transl_table=11 SOQE01000085.1 Genbank gene 32304 33686 . + . ID=gene-E3V84_08485;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=E3V84_08485 SOQE01000085.1 Protein Homology CDS 32304 33686 . + 0 ID=cds-TMR44549.1;Parent=gene-E3V84_08485;Dbxref=NCBI_GP:TMR44549.1;Name=TMR44549.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446325.1;locus_tag=E3V84_08485;product=3-isopropylmalate dehydratase large subunit;protein_id=TMR44549.1;transl_table=11 SOQE01000085.1 Genbank gene 33696 34289 . + . ID=gene-E3V84_08490;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=E3V84_08490 SOQE01000085.1 Protein Homology CDS 33696 34289 . + 0 ID=cds-TMR44550.1;Parent=gene-E3V84_08490;Dbxref=NCBI_GP:TMR44550.1;Name=TMR44550.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446324.1;locus_tag=E3V84_08490;product=3-isopropylmalate dehydratase small subunit;protein_id=TMR44550.1;transl_table=11 SOQE01000085.1 Genbank gene 34317 35096 . + . ID=gene-E3V84_08495;Name=E3V84_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08495 SOQE01000085.1 Protein Homology CDS 34317 35096 . + 0 ID=cds-TMR44551.1;Parent=gene-E3V84_08495;Dbxref=NCBI_GP:TMR44551.1;Name=TMR44551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=E3V84_08495;product=translation factor (SUA5);protein_id=TMR44551.1;transl_table=11 SOQE01000085.1 Genbank gene 35253 36986 . + . ID=gene-E3V84_08500;Name=E3V84_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08500 SOQE01000085.1 Protein Homology CDS 35253 36986 . + 0 ID=cds-TMR44552.1;Parent=gene-E3V84_08500;Dbxref=NCBI_GP:TMR44552.1;Name=TMR44552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895720.1;locus_tag=E3V84_08500;product=McrB family protein;protein_id=TMR44552.1;transl_table=11 SOQE01000085.1 Genbank gene 36946 38286 . + . ID=gene-E3V84_08505;Name=E3V84_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08505 SOQE01000085.1 Protein Homology CDS 36946 38286 . + 0 ID=cds-TMR44553.1;Parent=gene-E3V84_08505;Dbxref=NCBI_GP:TMR44553.1;Name=TMR44553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358722.1;locus_tag=E3V84_08505;product=3-isopropylmalate dehydrogenase;protein_id=TMR44553.1;transl_table=11 SOQE01000085.1 Genbank gene 38461 39447 . + . ID=gene-E3V84_08510;Name=E3V84_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08510 SOQE01000085.1 Protein Homology CDS 38461 39447 . + 0 ID=cds-TMR44554.1;Parent=gene-E3V84_08510;Dbxref=NCBI_GP:TMR44554.1;Name=TMR44554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446322.1;locus_tag=E3V84_08510;product=GMP reductase;protein_id=TMR44554.1;transl_table=11 SOQE01000085.1 Genbank gene 39514 39585 . + . ID=gene-E3V84_08515;Name=E3V84_08515;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_08515 SOQE01000085.1 tRNAscan-SE tRNA 39514 39585 . + . ID=rna-E3V84_08515;Parent=gene-E3V84_08515;anticodon=(pos:39547..39549);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_08515;product=tRNA-Arg SOQE01000085.1 tRNAscan-SE exon 39514 39585 . + . ID=exon-E3V84_08515-1;Parent=rna-E3V84_08515;anticodon=(pos:39547..39549);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_08515;product=tRNA-Arg SOQE01000085.1 Genbank gene 39768 40466 . + . ID=gene-E3V84_08520;Name=E3V84_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08520 SOQE01000085.1 Protein Homology CDS 39768 40466 . + 0 ID=cds-TMR44555.1;Parent=gene-E3V84_08520;Dbxref=NCBI_GP:TMR44555.1;Name=TMR44555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446321.1;locus_tag=E3V84_08520;product=ribonuclease III;protein_id=TMR44555.1;transl_table=11 SOQE01000085.1 Genbank gene 40457 43996 . + . ID=gene-E3V84_08525;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=E3V84_08525 SOQE01000085.1 Protein Homology CDS 40457 43996 . + 0 ID=cds-TMR44556.1;Parent=gene-E3V84_08525;Dbxref=NCBI_GP:TMR44556.1;Name=TMR44556.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446320.1;locus_tag=E3V84_08525;product=chromosome segregation protein SMC;protein_id=TMR44556.1;transl_table=11 SOQE01000085.1 Genbank gene 44190 45041 . - . ID=gene-E3V84_08530;Name=E3V84_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08530 SOQE01000085.1 Protein Homology CDS 44190 45041 . - 0 ID=cds-TMR44557.1;Parent=gene-E3V84_08530;Dbxref=NCBI_GP:TMR44557.1;Name=TMR44557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268807.1;locus_tag=E3V84_08530;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR44557.1;transl_table=11 SOQE01000085.1 Genbank gene 45121 45192 . + . ID=gene-E3V84_08535;Name=shp3;gbkey=Gene;gene=shp3;gene_biotype=protein_coding;locus_tag=E3V84_08535 SOQE01000085.1 Protein Homology CDS 45121 45192 . + 0 ID=cds-TMR44608.1;Parent=gene-E3V84_08535;Dbxref=NCBI_GP:TMR44608.1;Name=TMR44608.1;gbkey=CDS;gene=shp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128650800.1;locus_tag=E3V84_08535;product=peptide pheromone SHP3;protein_id=TMR44608.1;transl_table=11 SOQE01000085.1 Genbank gene 45294 47150 . + . ID=gene-E3V84_08540;Name=E3V84_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08540 SOQE01000085.1 Protein Homology CDS 45294 47150 . + 0 ID=cds-TMR44558.1;Parent=gene-E3V84_08540;Dbxref=NCBI_GP:TMR44558.1;Name=TMR44558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744516.1;locus_tag=E3V84_08540;product=hypothetical protein;protein_id=TMR44558.1;transl_table=11 SOQE01000085.1 Genbank gene 47646 48116 . + . ID=gene-E3V84_08545;Name=E3V84_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08545 SOQE01000085.1 Protein Homology CDS 47646 48116 . + 0 ID=cds-TMR44559.1;Parent=gene-E3V84_08545;Dbxref=NCBI_GP:TMR44559.1;Name=TMR44559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350879.1;locus_tag=E3V84_08545;product=hypothetical protein;protein_id=TMR44559.1;transl_table=11 SOQE01000085.1 Genbank gene 48122 49243 . + . ID=gene-E3V84_08550;Name=E3V84_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08550 SOQE01000085.1 Protein Homology CDS 48122 49243 . + 0 ID=cds-TMR44560.1;Parent=gene-E3V84_08550;Dbxref=NCBI_GP:TMR44560.1;Name=TMR44560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003696521.1;locus_tag=E3V84_08550;product=hypothetical protein;protein_id=TMR44560.1;transl_table=11 SOQE01000085.1 Genbank pseudogene 49247 50178 . + . ID=gene-E3V84_08555;Name=E3V84_08555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08555;pseudo=true SOQE01000085.1 Protein Homology CDS 49247 50178 . + 0 ID=cds-E3V84_08555;Parent=gene-E3V84_08555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144047.1;locus_tag=E3V84_08555;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000085.1 Genbank gene 50165 51391 . + . ID=gene-E3V84_08560;Name=E3V84_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08560 SOQE01000085.1 Protein Homology CDS 50165 51391 . + 0 ID=cds-TMR44561.1;Parent=gene-E3V84_08560;Dbxref=NCBI_GP:TMR44561.1;Name=TMR44561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257305.1;locus_tag=E3V84_08560;product=MFS transporter;protein_id=TMR44561.1;transl_table=11 SOQE01000085.1 Genbank gene 51375 52142 . + . ID=gene-E3V84_08565;Name=E3V84_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08565 SOQE01000085.1 Protein Homology CDS 51375 52142 . + 0 ID=cds-TMR44562.1;Parent=gene-E3V84_08565;Dbxref=NCBI_GP:TMR44562.1;Name=TMR44562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846117.1;locus_tag=E3V84_08565;product=site-specific DNA-methyltransferase;protein_id=TMR44562.1;transl_table=11 SOQE01000085.1 Genbank pseudogene 52164 53329 . + . ID=gene-E3V84_08570;Name=E3V84_08570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08570;pseudo=true SOQE01000085.1 Protein Homology CDS 52164 53329 . + 0 ID=cds-E3V84_08570;Parent=gene-E3V84_08570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705670.1;locus_tag=E3V84_08570;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11 SOQE01000085.1 Genbank pseudogene 53537 53776 . + . ID=gene-E3V84_08575;Name=E3V84_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08575;pseudo=true SOQE01000085.1 Protein Homology CDS 53537 53776 . + 0 ID=cds-E3V84_08575;Parent=gene-E3V84_08575;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001815354.1;locus_tag=E3V84_08575;product=GMP synthase;pseudo=true;transl_table=11 SOQE01000085.1 Genbank gene 53816 53929 . + . ID=gene-E3V84_08580;Name=E3V84_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08580 SOQE01000085.1 Protein Homology CDS 53816 53929 . + 0 ID=cds-TMR44609.1;Parent=gene-E3V84_08580;Dbxref=NCBI_GP:TMR44609.1;Name=TMR44609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03050.12;locus_tag=E3V84_08580;product=hypothetical protein;protein_id=TMR44609.1;transl_table=11 SOQE01000085.1 Genbank gene 54399 55190 . + . ID=gene-E3V84_08585;Name=E3V84_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08585 SOQE01000085.1 Protein Homology CDS 54399 55190 . + 0 ID=cds-TMR44563.1;Parent=gene-E3V84_08585;Dbxref=NCBI_GP:TMR44563.1;Name=TMR44563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153601.1;locus_tag=E3V84_08585;product=HAD family phosphatase;protein_id=TMR44563.1;transl_table=11 SOQE01000085.1 Genbank gene 55190 56008 . + . ID=gene-E3V84_08590;Name=E3V84_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08590 SOQE01000085.1 Protein Homology CDS 55190 56008 . + 0 ID=cds-TMR44564.1;Parent=gene-E3V84_08590;Dbxref=NCBI_GP:TMR44564.1;Name=TMR44564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358717.1;locus_tag=E3V84_08590;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR44564.1;transl_table=11 SOQE01000085.1 Genbank gene 56012 57289 . + . ID=gene-E3V84_08595;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=E3V84_08595 SOQE01000085.1 Protein Homology CDS 56012 57289 . + 0 ID=cds-TMR44565.1;Parent=gene-E3V84_08595;Dbxref=NCBI_GP:TMR44565.1;Name=TMR44565.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358716.1;locus_tag=E3V84_08595;product=signal recognition particle-docking protein FtsY;protein_id=TMR44565.1;transl_table=11 SOQE01000085.1 Genbank gene 57335 58822 . - . ID=gene-E3V84_08600;Name=E3V84_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08600 SOQE01000085.1 Protein Homology CDS 57335 58822 . - 0 ID=cds-TMR44566.1;Parent=gene-E3V84_08600;Dbxref=NCBI_GP:TMR44566.1;Name=TMR44566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358715.1;locus_tag=E3V84_08600;product=glucose-6-phosphate dehydrogenase;protein_id=TMR44566.1;transl_table=11 SOQE01000085.1 Genbank gene 58973 59713 . - . ID=gene-E3V84_08605;Name=E3V84_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08605 SOQE01000085.1 Protein Homology CDS 58973 59713 . - 0 ID=cds-TMR44567.1;Parent=gene-E3V84_08605;Dbxref=NCBI_GP:TMR44567.1;Name=TMR44567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=E3V84_08605;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR44567.1;transl_table=11 SOQE01000085.1 Genbank gene 59713 61878 . - . ID=gene-E3V84_08610;Name=E3V84_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08610 SOQE01000085.1 Protein Homology CDS 59713 61878 . - 0 ID=cds-TMR44568.1;Parent=gene-E3V84_08610;Dbxref=NCBI_GP:TMR44568.1;Name=TMR44568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358713.1;locus_tag=E3V84_08610;product=transporter substrate-binding domain-containing protein;protein_id=TMR44568.1;transl_table=11 SOQE01000085.1 Genbank gene 62051 63004 . + . ID=gene-E3V84_08615;Name=E3V84_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08615 SOQE01000085.1 Protein Homology CDS 62051 63004 . + 0 ID=cds-TMR44569.1;Parent=gene-E3V84_08615;Dbxref=NCBI_GP:TMR44569.1;Name=TMR44569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358712.1;locus_tag=E3V84_08615;product=CPBP family intramembrane metalloprotease;protein_id=TMR44569.1;transl_table=11 SOQE01000085.1 Genbank gene 63081 65069 . + . ID=gene-E3V84_08620;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=E3V84_08620 SOQE01000085.1 Protein Homology CDS 63081 65069 . + 0 ID=cds-TMR44570.1;Parent=gene-E3V84_08620;Dbxref=NCBI_GP:TMR44570.1;Name=TMR44570.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358711.1;locus_tag=E3V84_08620;product=excinuclease ABC subunit B;protein_id=TMR44570.1;transl_table=11 SOQE01000085.1 Genbank gene 65079 65642 . + . ID=gene-E3V84_08625;Name=E3V84_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08625 SOQE01000085.1 Protein Homology CDS 65079 65642 . + 0 ID=cds-TMR44571.1;Parent=gene-E3V84_08625;Dbxref=NCBI_GP:TMR44571.1;Name=TMR44571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358710.1;locus_tag=E3V84_08625;product=N-acetyltransferase;protein_id=TMR44571.1;transl_table=11 SOQE01000085.1 Genbank gene 65608 66096 . + . ID=gene-E3V84_08630;Name=E3V84_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08630 SOQE01000085.1 Protein Homology CDS 65608 66096 . + 0 ID=cds-TMR44572.1;Parent=gene-E3V84_08630;Dbxref=NCBI_GP:TMR44572.1;Name=TMR44572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358709.1;locus_tag=E3V84_08630;product=GNAT family N-acetyltransferase;protein_id=TMR44572.1;transl_table=11 SOQE01000085.1 Genbank gene 66170 66637 . + . ID=gene-E3V84_08635;Name=E3V84_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08635 SOQE01000085.1 Protein Homology CDS 66170 66637 . + 0 ID=cds-TMR44573.1;Parent=gene-E3V84_08635;Dbxref=NCBI_GP:TMR44573.1;Name=TMR44573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446309.1;locus_tag=E3V84_08635;product=8-oxo-dGTP diphosphatase;protein_id=TMR44573.1;transl_table=11 SOQE01000085.1 Genbank gene 66634 67149 . - . ID=gene-E3V84_08640;Name=E3V84_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08640 SOQE01000085.1 Protein Homology CDS 66634 67149 . - 0 ID=cds-TMR44574.1;Parent=gene-E3V84_08640;Dbxref=NCBI_GP:TMR44574.1;Name=TMR44574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358707.1;locus_tag=E3V84_08640;product=transcription repressor NadR;protein_id=TMR44574.1;transl_table=11 SOQE01000085.1 Genbank gene 67161 67688 . - . ID=gene-E3V84_08645;Name=E3V84_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08645 SOQE01000085.1 Protein Homology CDS 67161 67688 . - 0 ID=cds-TMR44575.1;Parent=gene-E3V84_08645;Dbxref=NCBI_GP:TMR44575.1;Name=TMR44575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446307.1;locus_tag=E3V84_08645;product=hypothetical protein;protein_id=TMR44575.1;transl_table=11 SOQE01000085.1 Genbank gene 67866 68429 . - . ID=gene-E3V84_08650;Name=E3V84_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08650 SOQE01000085.1 Protein Homology CDS 67866 68429 . - 0 ID=cds-TMR44576.1;Parent=gene-E3V84_08650;Dbxref=NCBI_GP:TMR44576.1;Name=TMR44576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446306.1;locus_tag=E3V84_08650;product=ECF transporter S component;protein_id=TMR44576.1;transl_table=11 SOQE01000085.1 Genbank gene 68413 68964 . - . ID=gene-E3V84_08655;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=E3V84_08655 SOQE01000085.1 Protein Homology CDS 68413 68964 . - 0 ID=cds-TMR44577.1;Parent=gene-E3V84_08655;Dbxref=NCBI_GP:TMR44577.1;Name=TMR44577.1;gbkey=CDS;gene=coaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358704.1;locus_tag=E3V84_08655;product=phosphopantothenoylcysteine decarboxylase;protein_id=TMR44577.1;transl_table=11 SOQE01000085.1 Genbank gene 68976 69665 . - . ID=gene-E3V84_08660;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=E3V84_08660 SOQE01000085.1 Protein Homology CDS 68976 69665 . - 0 ID=cds-TMR44578.1;Parent=gene-E3V84_08660;Dbxref=NCBI_GP:TMR44578.1;Name=TMR44578.1;gbkey=CDS;gene=coaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446304.1;locus_tag=E3V84_08660;product=phosphopantothenate--cysteine ligase;protein_id=TMR44578.1;transl_table=11 SOQE01000085.1 Genbank gene 69895 71565 . + . ID=gene-E3V84_08665;Name=E3V84_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08665 SOQE01000085.1 Protein Homology CDS 69895 71565 . + 0 ID=cds-TMR44579.1;Parent=gene-E3V84_08665;Dbxref=NCBI_GP:TMR44579.1;Name=TMR44579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358702.1;locus_tag=E3V84_08665;product=formate--tetrahydrofolate ligase;protein_id=TMR44579.1;transl_table=11 SOQE01000085.1 Genbank gene 71981 73156 . + . ID=gene-E3V84_08670;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=E3V84_08670 SOQE01000085.1 Protein Homology CDS 71981 73156 . + 0 ID=cds-TMR44580.1;Parent=gene-E3V84_08670;Dbxref=NCBI_GP:TMR44580.1;Name=TMR44580.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358701.1;locus_tag=E3V84_08670;product=A/G-specific adenine glycosylase;protein_id=TMR44580.1;transl_table=11 SOQE01000085.1 Genbank gene 73212 73916 . + . ID=gene-E3V84_08675;Name=E3V84_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08675 SOQE01000085.1 Protein Homology CDS 73212 73916 . + 0 ID=cds-TMR44581.1;Parent=gene-E3V84_08675;Dbxref=NCBI_GP:TMR44581.1;Name=TMR44581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722069.1;locus_tag=E3V84_08675;product=response regulator transcription factor;protein_id=TMR44581.1;transl_table=11 SOQE01000085.1 Genbank gene 73909 75258 . + . ID=gene-E3V84_08680;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=E3V84_08680 SOQE01000085.1 Protein Homology CDS 73909 75258 . + 0 ID=cds-TMR44582.1;Parent=gene-E3V84_08680;Dbxref=NCBI_GP:TMR44582.1;Name=TMR44582.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358699.1;locus_tag=E3V84_08680;product=cell wall metabolism sensor histidine kinase VicK;protein_id=TMR44582.1;transl_table=11 SOQE01000085.1 Genbank gene 75260 76069 . + . ID=gene-E3V84_08685;Name=E3V84_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08685 SOQE01000085.1 Protein Homology CDS 75260 76069 . + 0 ID=cds-TMR44583.1;Parent=gene-E3V84_08685;Dbxref=NCBI_GP:TMR44583.1;Name=TMR44583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358698.1;locus_tag=E3V84_08685;product=MBL fold metallo-hydrolase;protein_id=TMR44583.1;transl_table=11 SOQE01000085.1 Genbank gene 76100 76402 . + . ID=gene-E3V84_08690;Name=E3V84_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08690 SOQE01000085.1 Protein Homology CDS 76100 76402 . + 0 ID=cds-TMR44584.1;Parent=gene-E3V84_08690;Dbxref=NCBI_GP:TMR44584.1;Name=TMR44584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358697.1;locus_tag=E3V84_08690;product=antitoxin;protein_id=TMR44584.1;transl_table=11 SOQE01000085.1 Genbank gene 76395 76658 . + . ID=gene-E3V84_08695;Name=E3V84_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08695 SOQE01000085.1 Protein Homology CDS 76395 76658 . + 0 ID=cds-TMR44585.1;Parent=gene-E3V84_08695;Dbxref=NCBI_GP:TMR44585.1;Name=TMR44585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358696.1;locus_tag=E3V84_08695;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR44585.1;transl_table=11 SOQE01000085.1 Genbank gene 76734 78617 . + . ID=gene-E3V84_08700;Name=E3V84_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08700 SOQE01000085.1 Protein Homology CDS 76734 78617 . + 0 ID=cds-TMR44586.1;Parent=gene-E3V84_08700;Dbxref=NCBI_GP:TMR44586.1;Name=TMR44586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288742.1;locus_tag=E3V84_08700;product=restriction endonuclease;protein_id=TMR44586.1;transl_table=11 SOQE01000085.1 Genbank gene 78782 82036 . + . ID=gene-E3V84_08705;Name=E3V84_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08705 SOQE01000085.1 Protein Homology CDS 78782 82036 . + 0 ID=cds-TMR44587.1;Parent=gene-E3V84_08705;Dbxref=NCBI_GP:TMR44587.1;Name=TMR44587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358694.1;locus_tag=E3V84_08705;product=restriction endonuclease;protein_id=TMR44587.1;transl_table=11 SOQE01000085.1 Genbank gene 82306 83274 . - . ID=gene-E3V84_08710;Name=E3V84_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08710 SOQE01000085.1 Protein Homology CDS 82306 83274 . - 0 ID=cds-TMR44588.1;Parent=gene-E3V84_08710;Dbxref=NCBI_GP:TMR44588.1;Name=TMR44588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035175.1;locus_tag=E3V84_08710;product=L-lactate dehydrogenase;protein_id=TMR44588.1;transl_table=11 SOQE01000085.1 Genbank gene 83468 85936 . + . ID=gene-E3V84_08715;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=E3V84_08715 SOQE01000085.1 Protein Homology CDS 83468 85936 . + 0 ID=cds-TMR44589.1;Parent=gene-E3V84_08715;Dbxref=NCBI_GP:TMR44589.1;Name=TMR44589.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001152995.1;locus_tag=E3V84_08715;product=DNA gyrase subunit A;protein_id=TMR44589.1;transl_table=11 SOQE01000085.1 Genbank gene 85936 86679 . + . ID=gene-E3V84_08720;Name=E3V84_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08720 SOQE01000085.1 Protein Homology CDS 85936 86679 . + 0 ID=cds-TMR44590.1;Parent=gene-E3V84_08720;Dbxref=NCBI_GP:TMR44590.1;Name=TMR44590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358691.1;locus_tag=E3V84_08720;product=sortase;protein_id=TMR44590.1;transl_table=11 SOQE01000085.1 Genbank gene 86812 87120 . + . ID=gene-E3V84_08725;Name=E3V84_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08725 SOQE01000085.1 Protein Homology CDS 86812 87120 . + 0 ID=cds-TMR44591.1;Parent=gene-E3V84_08725;Dbxref=NCBI_GP:TMR44591.1;Name=TMR44591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291823.1;locus_tag=E3V84_08725;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=TMR44591.1;transl_table=11 SOQE01000085.1 Genbank gene 87216 88490 . + . ID=gene-E3V84_08730;Name=E3V84_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08730 SOQE01000085.1 Protein Homology CDS 87216 88490 . + 0 ID=cds-TMR44592.1;Parent=gene-E3V84_08730;Dbxref=NCBI_GP:TMR44592.1;Name=TMR44592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358687.1;locus_tag=E3V84_08730;product=DUF2130 domain-containing protein;protein_id=TMR44592.1;transl_table=11 SOQE01000085.1 Genbank gene 88501 89379 . + . ID=gene-E3V84_08735;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=E3V84_08735 SOQE01000085.1 Protein Homology CDS 88501 89379 . + 0 ID=cds-TMR44593.1;Parent=gene-E3V84_08735;Dbxref=NCBI_GP:TMR44593.1;Name=TMR44593.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358685.1;locus_tag=E3V84_08735;product=tRNA pseudouridine(55) synthase TruB;protein_id=TMR44593.1;transl_table=11 SOQE01000085.1 Genbank gene 89528 89749 . + . ID=gene-E3V84_08740;Name=E3V84_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08740 SOQE01000085.1 Protein Homology CDS 89528 89749 . + 0 ID=cds-TMR44594.1;Parent=gene-E3V84_08740;Dbxref=NCBI_GP:TMR44594.1;Name=TMR44594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808579.1;locus_tag=E3V84_08740;product=bacteriocin;protein_id=TMR44594.1;transl_table=11 SOQE01000085.1 Genbank gene 89746 90048 . + . ID=gene-E3V84_08745;Name=E3V84_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08745 SOQE01000085.1 Protein Homology CDS 89746 90048 . + 0 ID=cds-TMR44595.1;Parent=gene-E3V84_08745;Dbxref=NCBI_GP:TMR44595.1;Name=TMR44595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358684.1;locus_tag=E3V84_08745;product=bacteriocin immunity protein;protein_id=TMR44595.1;transl_table=11 SOQE01000085.1 Genbank gene 90051 90161 . - . ID=gene-E3V84_08750;Name=E3V84_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08750 SOQE01000085.1 Protein Homology CDS 90051 90161 . - 0 ID=cds-TMR44596.1;Parent=gene-E3V84_08750;Dbxref=NCBI_GP:TMR44596.1;Name=TMR44596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809208.1;locus_tag=E3V84_08750;product=pseudouridine synthase;protein_id=TMR44596.1;transl_table=11 SOQE01000085.1 Genbank gene 90156 90794 . + . ID=gene-E3V84_08755;Name=E3V84_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08755 SOQE01000085.1 Protein Homology CDS 90156 90794 . + 0 ID=cds-TMR44597.1;Parent=gene-E3V84_08755;Dbxref=NCBI_GP:TMR44597.1;Name=TMR44597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446125.1;locus_tag=E3V84_08755;product=uridine kinase;protein_id=TMR44597.1;transl_table=11 SOQE01000085.1 Genbank gene 90922 92262 . + . ID=gene-E3V84_08760;Name=E3V84_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08760 SOQE01000085.1 Protein Homology CDS 90922 92262 . + 0 ID=cds-TMR44598.1;Parent=gene-E3V84_08760;Dbxref=NCBI_GP:TMR44598.1;Name=TMR44598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446126.1;locus_tag=E3V84_08760;product=exodeoxyribonuclease VII large subunit;protein_id=TMR44598.1;transl_table=11 SOQE01000085.1 Genbank gene 92240 92452 . + . ID=gene-E3V84_08765;Name=E3V84_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08765 SOQE01000085.1 Protein Homology CDS 92240 92452 . + 0 ID=cds-TMR44599.1;Parent=gene-E3V84_08765;Dbxref=NCBI_GP:TMR44599.1;Name=TMR44599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358681.1;locus_tag=E3V84_08765;product=exodeoxyribonuclease VII small subunit;protein_id=TMR44599.1;transl_table=11 SOQE01000085.1 Genbank gene 92449 93324 . + . ID=gene-E3V84_08770;Name=E3V84_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08770 SOQE01000085.1 Protein Homology CDS 92449 93324 . + 0 ID=cds-TMR44600.1;Parent=gene-E3V84_08770;Dbxref=NCBI_GP:TMR44600.1;Name=TMR44600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358680.1;locus_tag=E3V84_08770;product=polyprenyl synthetase family protein;protein_id=TMR44600.1;transl_table=11 SOQE01000085.1 Genbank gene 93317 94132 . + . ID=gene-E3V84_08775;Name=E3V84_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08775 SOQE01000085.1 Protein Homology CDS 93317 94132 . + 0 ID=cds-TMR44601.1;Parent=gene-E3V84_08775;Dbxref=NCBI_GP:TMR44601.1;Name=TMR44601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446129.1;locus_tag=E3V84_08775;product=TlyA family RNA methyltransferase;protein_id=TMR44601.1;transl_table=11 SOQE01000085.1 Genbank gene 94125 94556 . + . ID=gene-E3V84_08780;Name=E3V84_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08780 SOQE01000085.1 Protein Homology CDS 94125 94556 . + 0 ID=cds-TMR44602.1;Parent=gene-E3V84_08780;Dbxref=NCBI_GP:TMR44602.1;Name=TMR44602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446130.1;locus_tag=E3V84_08780;product=arginine repressor;protein_id=TMR44602.1;transl_table=11 SOQE01000085.1 Genbank gene 94563 96230 . + . ID=gene-E3V84_08785;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=E3V84_08785 SOQE01000085.1 Protein Homology CDS 94563 96230 . + 0 ID=cds-TMR44603.1;Parent=gene-E3V84_08785;Dbxref=NCBI_GP:TMR44603.1;Name=TMR44603.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446131.1;locus_tag=E3V84_08785;product=DNA repair protein RecN;protein_id=TMR44603.1;transl_table=11 SOQE01000085.1 Genbank gene 96232 96960 . + . ID=gene-E3V84_08790;Name=E3V84_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08790 SOQE01000085.1 Protein Homology CDS 96232 96960 . + 0 ID=cds-TMR44604.1;Parent=gene-E3V84_08790;Dbxref=NCBI_GP:TMR44604.1;Name=TMR44604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446132.1;locus_tag=E3V84_08790;product=serine/threonine protein phosphatase;protein_id=TMR44604.1;transl_table=11 SOQE01000085.1 Genbank gene 97039 98862 . + . ID=gene-E3V84_08795;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=E3V84_08795 SOQE01000085.1 Protein Homology CDS 97039 98862 . + 0 ID=cds-TMR44605.1;Parent=gene-E3V84_08795;Dbxref=NCBI_GP:TMR44605.1;Name=TMR44605.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446133.1;locus_tag=E3V84_08795;product=elongation factor 4;protein_id=TMR44605.1;transl_table=11 SOQE01000085.1 Genbank gene 99195 100106 . + . ID=gene-E3V84_08800;Name=E3V84_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08800 SOQE01000085.1 Protein Homology CDS 99195 100106 . + 0 ID=cds-TMR44606.1;Parent=gene-E3V84_08800;Dbxref=NCBI_GP:TMR44606.1;Name=TMR44606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218323.1;locus_tag=E3V84_08800;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=TMR44606.1;transl_table=11 SOQE01000085.1 Genbank gene 100769 104468 . + . ID=gene-E3V84_08805;Name=E3V84_08805;end_range=104468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08805;partial=true SOQE01000085.1 Protein Homology CDS 100769 104468 . + 0 ID=cds-TMR44607.1;Parent=gene-E3V84_08805;Dbxref=NCBI_GP:TMR44607.1;Name=TMR44607.1;end_range=104468,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9%2CHMM:TIGR01168.1;locus_tag=E3V84_08805;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR44607.1;transl_table=11 ##sequence-region SOQE01000086.1 1 1965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000086.1 Genbank region 1 1965 . + . ID=SOQE01000086.1:1..1965;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000086.1 Genbank gene 100 1833 . - . ID=gene-E3V84_08810;Name=E3V84_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08810 SOQE01000086.1 Protein Homology CDS 100 1833 . - 0 ID=cds-TMR44456.1;Parent=gene-E3V84_08810;Dbxref=NCBI_GP:TMR44456.1;Name=TMR44456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013778385.1;locus_tag=E3V84_08810;product=IS1634 family transposase;protein_id=TMR44456.1;transl_table=11 ##sequence-region SOQE01000087.1 1 610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000087.1 Genbank region 1 610 . + . ID=SOQE01000087.1:1..610;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000087.1 Genbank gene 1 610 . - . ID=gene-E3V84_08815;Name=E3V84_08815;end_range=610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08815;partial=true;start_range=.,1 SOQE01000087.1 Protein Homology CDS 1 610 . - 1 ID=cds-TMR44446.1;Parent=gene-E3V84_08815;Dbxref=NCBI_GP:TMR44446.1;Name=TMR44446.1;end_range=610,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V84_08815;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR44446.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000088.1 1 53998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000088.1 Genbank region 1 53998 . + . ID=SOQE01000088.1:1..53998;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000088.1 Genbank gene 1 61 . - . ID=gene-E3V84_08820;Name=E3V84_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08820;partial=true;start_range=.,1 SOQE01000088.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR44358.1;Parent=gene-E3V84_08820;Dbxref=NCBI_GP:TMR44358.1;Name=TMR44358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_08820;partial=true;product=IS200/IS605 family transposase;protein_id=TMR44358.1;start_range=.,1;transl_table=11 SOQE01000088.1 Genbank gene 240 2237 . - . ID=gene-E3V84_08825;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=E3V84_08825 SOQE01000088.1 Protein Homology CDS 240 2237 . - 0 ID=cds-TMR44303.1;Parent=gene-E3V84_08825;Dbxref=NCBI_GP:TMR44303.1;Name=TMR44303.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358290.2;locus_tag=E3V84_08825;product=methionine--tRNA ligase;protein_id=TMR44303.1;transl_table=11 SOQE01000088.1 Genbank gene 2361 3620 . - . ID=gene-E3V84_08830;Name=E3V84_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08830 SOQE01000088.1 Protein Homology CDS 2361 3620 . - 0 ID=cds-TMR44304.1;Parent=gene-E3V84_08830;Dbxref=NCBI_GP:TMR44304.1;Name=TMR44304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358289.1;locus_tag=E3V84_08830;product=FtsX-like permease family protein;protein_id=TMR44304.1;transl_table=11 SOQE01000088.1 Genbank gene 3622 4323 . - . ID=gene-E3V84_08835;Name=E3V84_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08835 SOQE01000088.1 Protein Homology CDS 3622 4323 . - 0 ID=cds-TMR44305.1;Parent=gene-E3V84_08835;Dbxref=NCBI_GP:TMR44305.1;Name=TMR44305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358288.1;locus_tag=E3V84_08835;product=ABC transporter ATP-binding protein;protein_id=TMR44305.1;transl_table=11 SOQE01000088.1 Genbank gene 4307 5500 . - . ID=gene-E3V84_08840;Name=E3V84_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08840 SOQE01000088.1 Protein Homology CDS 4307 5500 . - 0 ID=cds-TMR44306.1;Parent=gene-E3V84_08840;Dbxref=NCBI_GP:TMR44306.1;Name=TMR44306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358287.1;locus_tag=E3V84_08840;product=efflux RND transporter periplasmic adaptor subunit;protein_id=TMR44306.1;transl_table=11 SOQE01000088.1 Genbank gene 5788 7134 . + . ID=gene-E3V84_08845;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=E3V84_08845 SOQE01000088.1 Protein Homology CDS 5788 7134 . + 0 ID=cds-TMR44307.1;Parent=gene-E3V84_08845;Dbxref=NCBI_GP:TMR44307.1;Name=TMR44307.1;gbkey=CDS;gene=gor;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358286.1;locus_tag=E3V84_08845;product=glutathione-disulfide reductase;protein_id=TMR44307.1;transl_table=11 SOQE01000088.1 Genbank gene 7300 7800 . - . ID=gene-E3V84_08850;Name=E3V84_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08850 SOQE01000088.1 Protein Homology CDS 7300 7800 . - 0 ID=cds-TMR44308.1;Parent=gene-E3V84_08850;Dbxref=NCBI_GP:TMR44308.1;Name=TMR44308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445953.1;locus_tag=E3V84_08850;product=hypothetical protein;protein_id=TMR44308.1;transl_table=11 SOQE01000088.1 Genbank gene 7797 8420 . - . ID=gene-E3V84_08855;Name=E3V84_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08855 SOQE01000088.1 Protein Homology CDS 7797 8420 . - 0 ID=cds-TMR44309.1;Parent=gene-E3V84_08855;Dbxref=NCBI_GP:TMR44309.1;Name=TMR44309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445952.1;locus_tag=E3V84_08855;product=ATP-binding cassette domain-containing protein;protein_id=TMR44309.1;transl_table=11 SOQE01000088.1 Genbank gene 8417 10399 . - . ID=gene-E3V84_08860;Name=E3V84_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08860 SOQE01000088.1 Protein Homology CDS 8417 10399 . - 0 ID=cds-TMR44310.1;Parent=gene-E3V84_08860;Dbxref=NCBI_GP:TMR44310.1;Name=TMR44310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445951.1;locus_tag=E3V84_08860;product=ABC transporter permease;protein_id=TMR44310.1;transl_table=11 SOQE01000088.1 Genbank gene 10465 10803 . - . ID=gene-E3V84_08865;Name=E3V84_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08865 SOQE01000088.1 Protein Homology CDS 10465 10803 . - 0 ID=cds-TMR44311.1;Parent=gene-E3V84_08865;Dbxref=NCBI_GP:TMR44311.1;Name=TMR44311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746107.1;locus_tag=E3V84_08865;product=hypothetical protein;protein_id=TMR44311.1;transl_table=11 SOQE01000088.1 Genbank gene 11229 11765 . + . ID=gene-E3V84_08870;Name=E3V84_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08870 SOQE01000088.1 Protein Homology CDS 11229 11765 . + 0 ID=cds-TMR44312.1;Parent=gene-E3V84_08870;Dbxref=NCBI_GP:TMR44312.1;Name=TMR44312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445950.1;locus_tag=E3V84_08870;product=biotin transporter BioY;protein_id=TMR44312.1;transl_table=11 SOQE01000088.1 Genbank gene 11819 12034 . - . ID=gene-E3V84_08875;Name=E3V84_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08875 SOQE01000088.1 Protein Homology CDS 11819 12034 . - 0 ID=cds-TMR44313.1;Parent=gene-E3V84_08875;Dbxref=NCBI_GP:TMR44313.1;Name=TMR44313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807422.1;locus_tag=E3V84_08875;product=hypothetical protein;protein_id=TMR44313.1;transl_table=11 SOQE01000088.1 Genbank gene 12133 12453 . + . ID=gene-E3V84_08880;Name=E3V84_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08880 SOQE01000088.1 Protein Homology CDS 12133 12453 . + 0 ID=cds-TMR44314.1;Parent=gene-E3V84_08880;Dbxref=NCBI_GP:TMR44314.1;Name=TMR44314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358283.1;locus_tag=E3V84_08880;product=hypothetical protein;protein_id=TMR44314.1;transl_table=11 SOQE01000088.1 Genbank gene 12484 12822 . - . ID=gene-E3V84_08885;Name=E3V84_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08885 SOQE01000088.1 Protein Homology CDS 12484 12822 . - 0 ID=cds-TMR44315.1;Parent=gene-E3V84_08885;Dbxref=NCBI_GP:TMR44315.1;Name=TMR44315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358282.1;locus_tag=E3V84_08885;product=hypothetical protein;protein_id=TMR44315.1;transl_table=11 SOQE01000088.1 Genbank gene 12834 13553 . - . ID=gene-E3V84_08890;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=E3V84_08890 SOQE01000088.1 Protein Homology CDS 12834 13553 . - 0 ID=cds-TMR44359.1;Parent=gene-E3V84_08890;Dbxref=NCBI_GP:TMR44359.1;Name=TMR44359.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445946.1;locus_tag=E3V84_08890;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=TMR44359.1;transl_table=11 SOQE01000088.1 Genbank gene 13543 14061 . - . ID=gene-E3V84_08895;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=E3V84_08895 SOQE01000088.1 Protein Homology CDS 13543 14061 . - 0 ID=cds-TMR44316.1;Parent=gene-E3V84_08895;Dbxref=NCBI_GP:TMR44316.1;Name=TMR44316.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445945.1;locus_tag=E3V84_08895;product=ribosome maturation factor RimM;protein_id=TMR44316.1;transl_table=11 SOQE01000088.1 Genbank gene 14092 14880 . - . ID=gene-E3V84_08900;Name=E3V84_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08900 SOQE01000088.1 Protein Homology CDS 14092 14880 . - 0 ID=cds-TMR44360.1;Parent=gene-E3V84_08900;Dbxref=NCBI_GP:TMR44360.1;Name=TMR44360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445944.1;locus_tag=E3V84_08900;product=alpha/beta hydrolase;protein_id=TMR44360.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 15023 15227 . - . ID=gene-E3V84_08905;Name=E3V84_08905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08905;pseudo=true SOQE01000088.1 Protein Homology CDS 15023 15227 . - 0 ID=cds-E3V84_08905;Parent=gene-E3V84_08905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779614.1;locus_tag=E3V84_08905;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 15457 15696 . - . ID=gene-E3V84_08910;Name=E3V84_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08910 SOQE01000088.1 Protein Homology CDS 15457 15696 . - 0 ID=cds-TMR44317.1;Parent=gene-E3V84_08910;Dbxref=NCBI_GP:TMR44317.1;Name=TMR44317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590445.1;locus_tag=E3V84_08910;product=KH domain-containing protein;protein_id=TMR44317.1;transl_table=11 SOQE01000088.1 Genbank gene 15716 15988 . - . ID=gene-E3V84_08915;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=E3V84_08915 SOQE01000088.1 Protein Homology CDS 15716 15988 . - 0 ID=cds-TMR44318.1;Parent=gene-E3V84_08915;Dbxref=NCBI_GP:TMR44318.1;Name=TMR44318.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=E3V84_08915;product=30S ribosomal protein S16;protein_id=TMR44318.1;transl_table=11 SOQE01000088.1 Genbank gene 16166 16366 . + . ID=gene-E3V84_08920;Name=E3V84_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08920 SOQE01000088.1 Protein Homology CDS 16166 16366 . + 0 ID=cds-TMR44319.1;Parent=gene-E3V84_08920;Dbxref=NCBI_GP:TMR44319.1;Name=TMR44319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092275.1;locus_tag=E3V84_08920;product=hypothetical protein;protein_id=TMR44319.1;transl_table=11 SOQE01000088.1 Genbank gene 16449 16670 . - . ID=gene-E3V84_08925;Name=E3V84_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08925 SOQE01000088.1 Protein Homology CDS 16449 16670 . - 0 ID=cds-TMR44320.1;Parent=gene-E3V84_08925;Dbxref=NCBI_GP:TMR44320.1;Name=TMR44320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_08925;product=hypothetical protein;protein_id=TMR44320.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 16711 16812 . - . ID=gene-E3V84_08930;Name=E3V84_08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08930;pseudo=true SOQE01000088.1 Protein Homology CDS 16711 16812 . - 0 ID=cds-E3V84_08930;Parent=gene-E3V84_08930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893744.1;locus_tag=E3V84_08930;product=30S ribosomal protein S9;pseudo=true;transl_table=11 SOQE01000088.1 Genbank pseudogene 16985 17089 . - . ID=gene-E3V84_08935;Name=E3V84_08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08935;pseudo=true SOQE01000088.1 Protein Homology CDS 16985 17089 . - 0 ID=cds-E3V84_08935;Parent=gene-E3V84_08935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036206.1;locus_tag=E3V84_08935;product=site-specific integrase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 17050 17544 . - . ID=gene-E3V84_08940;Name=E3V84_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08940 SOQE01000088.1 Protein Homology CDS 17050 17544 . - 0 ID=cds-TMR44321.1;Parent=gene-E3V84_08940;Dbxref=NCBI_GP:TMR44321.1;Name=TMR44321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284846.1;locus_tag=E3V84_08940;product=XRE family transcriptional regulator;protein_id=TMR44321.1;transl_table=11 SOQE01000088.1 Genbank gene 17588 17926 . - . ID=gene-E3V84_08945;Name=cadX;gbkey=Gene;gene=cadX;gene_biotype=protein_coding;locus_tag=E3V84_08945 SOQE01000088.1 Protein Homology CDS 17588 17926 . - 0 ID=cds-TMR44322.1;Parent=gene-E3V84_08945;Dbxref=NCBI_GP:TMR44322.1;Name=TMR44322.1;gbkey=CDS;gene=cadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711077.1;locus_tag=E3V84_08945;product=Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX;protein_id=TMR44322.1;transl_table=11 SOQE01000088.1 Genbank gene 17938 18564 . - . ID=gene-E3V84_08950;Name=E3V84_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08950 SOQE01000088.1 Protein Homology CDS 17938 18564 . - 0 ID=cds-TMR44323.1;Parent=gene-E3V84_08950;Dbxref=NCBI_GP:TMR44323.1;Name=TMR44323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035949.1;locus_tag=E3V84_08950;product=CadD family cadmium resistance transporter;protein_id=TMR44323.1;transl_table=11 SOQE01000088.1 Genbank gene 18581 18754 . + . ID=gene-E3V84_08955;Name=E3V84_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08955 SOQE01000088.1 Protein Homology CDS 18581 18754 . + 0 ID=cds-TMR44324.1;Parent=gene-E3V84_08955;Dbxref=NCBI_GP:TMR44324.1;Name=TMR44324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892741.1;locus_tag=E3V84_08955;product=FanG protein;protein_id=TMR44324.1;transl_table=11 SOQE01000088.1 Genbank gene 19186 19764 . + . ID=gene-E3V84_08960;Name=E3V84_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08960 SOQE01000088.1 Protein Homology CDS 19186 19764 . + 0 ID=cds-TMR44325.1;Parent=gene-E3V84_08960;Dbxref=NCBI_GP:TMR44325.1;Name=TMR44325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445940.1;locus_tag=E3V84_08960;product=DUF3796 domain-containing protein;protein_id=TMR44325.1;transl_table=11 SOQE01000088.1 Genbank gene 19767 19991 . + . ID=gene-E3V84_08965;Name=E3V84_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08965 SOQE01000088.1 Protein Homology CDS 19767 19991 . + 0 ID=cds-TMR44326.1;Parent=gene-E3V84_08965;Dbxref=NCBI_GP:TMR44326.1;Name=TMR44326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036207.1;locus_tag=E3V84_08965;product=transcriptional regulator;protein_id=TMR44326.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 20142 20353 . + . ID=gene-E3V84_08970;Name=E3V84_08970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_08970;pseudo=true SOQE01000088.1 Protein Homology CDS 20142 20353 . + 0 ID=cds-E3V84_08970;Parent=gene-E3V84_08970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007554690.1;locus_tag=E3V84_08970;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 20319 20480 . + . ID=gene-E3V84_08975;Name=E3V84_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08975 SOQE01000088.1 Protein Homology CDS 20319 20480 . + 0 ID=cds-TMR44327.1;Parent=gene-E3V84_08975;Dbxref=NCBI_GP:TMR44327.1;Name=TMR44327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284845.1;locus_tag=E3V84_08975;product=hypothetical protein;protein_id=TMR44327.1;transl_table=11 SOQE01000088.1 Genbank gene 20884 21096 . + . ID=gene-E3V84_08980;Name=E3V84_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08980 SOQE01000088.1 Protein Homology CDS 20884 21096 . + 0 ID=cds-TMR44361.1;Parent=gene-E3V84_08980;Dbxref=NCBI_GP:TMR44361.1;Name=TMR44361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358274.1;locus_tag=E3V84_08980;product=hypothetical protein;protein_id=TMR44361.1;transl_table=11 SOQE01000088.1 Genbank gene 21179 21982 . + . ID=gene-E3V84_08985;Name=E3V84_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08985 SOQE01000088.1 Protein Homology CDS 21179 21982 . + 0 ID=cds-TMR44328.1;Parent=gene-E3V84_08985;Dbxref=NCBI_GP:TMR44328.1;Name=TMR44328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358273.1;locus_tag=E3V84_08985;product=peptidylprolyl isomerase;protein_id=TMR44328.1;transl_table=11 SOQE01000088.1 Genbank gene 22037 23578 . - . ID=gene-E3V84_08990;Name=E3V84_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08990 SOQE01000088.1 Protein Homology CDS 22037 23578 . - 0 ID=cds-TMR44329.1;Parent=gene-E3V84_08990;Dbxref=NCBI_GP:TMR44329.1;Name=TMR44329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445936.1;locus_tag=E3V84_08990;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=TMR44329.1;transl_table=11 SOQE01000088.1 Genbank gene 23580 24062 . - . ID=gene-E3V84_08995;Name=E3V84_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_08995 SOQE01000088.1 Protein Homology CDS 23580 24062 . - 0 ID=cds-TMR44330.1;Parent=gene-E3V84_08995;Dbxref=NCBI_GP:TMR44330.1;Name=TMR44330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976721.1;locus_tag=E3V84_08995;product=VanZ family protein;protein_id=TMR44330.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 24062 25127 . - . ID=gene-E3V84_09000;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=E3V84_09000;pseudo=true SOQE01000088.1 Protein Homology CDS 24062 25127 . - 0 ID=cds-E3V84_09000;Parent=gene-E3V84_09000;Note=frameshifted;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445934.1;locus_tag=E3V84_09000;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 25148 25678 . - . ID=gene-E3V84_09005;Name=E3V84_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09005 SOQE01000088.1 Protein Homology CDS 25148 25678 . - 0 ID=cds-TMR44331.1;Parent=gene-E3V84_09005;Dbxref=NCBI_GP:TMR44331.1;Name=TMR44331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445933.1;locus_tag=E3V84_09005;product=DUF1027 domain-containing protein;protein_id=TMR44331.1;transl_table=11 SOQE01000088.1 Genbank gene 25835 26440 . - . ID=gene-E3V84_09010;Name=E3V84_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09010 SOQE01000088.1 Protein Homology CDS 25835 26440 . - 0 ID=cds-TMR44332.1;Parent=gene-E3V84_09010;Dbxref=NCBI_GP:TMR44332.1;Name=TMR44332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358268.1;locus_tag=E3V84_09010;product=superoxide dismutase;protein_id=TMR44332.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 26525 26636 . - . ID=gene-E3V84_09015;Name=E3V84_09015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09015;pseudo=true SOQE01000088.1 Protein Homology CDS 26525 26636 . - 0 ID=cds-E3V84_09015;Parent=gene-E3V84_09015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823338.1;locus_tag=E3V84_09015;product=lysyl-tRNA synthetase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank pseudogene 26797 26871 . - . ID=gene-E3V84_09020;Name=E3V84_09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09020;pseudo=true SOQE01000088.1 Protein Homology CDS 26797 26871 . - 0 ID=cds-E3V84_09020;Parent=gene-E3V84_09020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837117.1;locus_tag=E3V84_09020;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 26947 27984 . - . ID=gene-E3V84_09025;Name=E3V84_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09025 SOQE01000088.1 Protein Homology CDS 26947 27984 . - 0 ID=cds-TMR44333.1;Parent=gene-E3V84_09025;Dbxref=NCBI_GP:TMR44333.1;Name=TMR44333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358267.1;locus_tag=E3V84_09025;product=DNA polymerase III subunit delta;protein_id=TMR44333.1;transl_table=11 SOQE01000088.1 Genbank gene 28018 28953 . - . ID=gene-E3V84_09030;Name=E3V84_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09030 SOQE01000088.1 Protein Homology CDS 28018 28953 . - 0 ID=cds-TMR44334.1;Parent=gene-E3V84_09030;Dbxref=NCBI_GP:TMR44334.1;Name=TMR44334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358266.1;locus_tag=E3V84_09030;product=dihydroorotate oxidase;protein_id=TMR44334.1;transl_table=11 SOQE01000088.1 Genbank gene 29087 29215 . - . ID=gene-E3V84_09035;Name=E3V84_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09035 SOQE01000088.1 Protein Homology CDS 29087 29215 . - 0 ID=cds-TMR44362.1;Parent=gene-E3V84_09035;Dbxref=NCBI_GP:TMR44362.1;Name=TMR44362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809373.1;locus_tag=E3V84_09035;product=dihydroorotate dehydrogenase;protein_id=TMR44362.1;transl_table=11 SOQE01000088.1 Genbank gene 29401 30591 . - . ID=gene-E3V84_09040;Name=E3V84_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09040 SOQE01000088.1 Protein Homology CDS 29401 30591 . - 0 ID=cds-TMR44335.1;Parent=gene-E3V84_09040;Dbxref=NCBI_GP:TMR44335.1;Name=TMR44335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358265.1;locus_tag=E3V84_09040;product=methionine adenosyltransferase;protein_id=TMR44335.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 30753 30994 . + . ID=gene-E3V84_09045;Name=E3V84_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09045;pseudo=true SOQE01000088.1 Protein Homology CDS 30753 30994 . + 0 ID=cds-E3V84_09045;Parent=gene-E3V84_09045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446503.1;locus_tag=E3V84_09045;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 31087 32430 . - . ID=gene-E3V84_09050;Name=E3V84_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09050 SOQE01000088.1 Protein Homology CDS 31087 32430 . - 0 ID=cds-TMR44336.1;Parent=gene-E3V84_09050;Dbxref=NCBI_GP:TMR44336.1;Name=TMR44336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446504.1;locus_tag=E3V84_09050;product=DEAD/DEAH box helicase;protein_id=TMR44336.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 32600 32671 . - . ID=gene-E3V84_09055;Name=E3V84_09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09055;pseudo=true SOQE01000088.1 Protein Homology CDS 32600 32671 . - 0 ID=cds-E3V84_09055;Parent=gene-E3V84_09055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V84_09055;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 32677 33492 . - . ID=gene-E3V84_09060;Name=E3V84_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09060 SOQE01000088.1 Protein Homology CDS 32677 33492 . - 0 ID=cds-TMR44337.1;Parent=gene-E3V84_09060;Dbxref=NCBI_GP:TMR44337.1;Name=TMR44337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358263.1;locus_tag=E3V84_09060;product=hydrolase;protein_id=TMR44337.1;transl_table=11 SOQE01000088.1 Genbank gene 33544 35724 . - . ID=gene-E3V84_09065;Name=E3V84_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09065 SOQE01000088.1 Protein Homology CDS 33544 35724 . - 0 ID=cds-TMR44338.1;Parent=gene-E3V84_09065;Dbxref=NCBI_GP:TMR44338.1;Name=TMR44338.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446506.1;locus_tag=E3V84_09065;product=PTS glucose/maltose transporter subunit IIBCA;protein_id=TMR44338.1;transl_table=11 SOQE01000088.1 Genbank gene 36131 37057 . - . ID=gene-E3V84_09070;Name=E3V84_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09070 SOQE01000088.1 Protein Homology CDS 36131 37057 . - 0 ID=cds-TMR44339.1;Parent=gene-E3V84_09070;Dbxref=NCBI_GP:TMR44339.1;Name=TMR44339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446508.1;locus_tag=E3V84_09070;product=ABC transporter permease;protein_id=TMR44339.1;transl_table=11 SOQE01000088.1 Genbank gene 37050 37742 . - . ID=gene-E3V84_09075;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=E3V84_09075 SOQE01000088.1 Protein Homology CDS 37050 37742 . - 0 ID=cds-TMR44340.1;Parent=gene-E3V84_09075;Dbxref=NCBI_GP:TMR44340.1;Name=TMR44340.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446509.1;locus_tag=E3V84_09075;product=cell division ATP-binding protein FtsE;protein_id=TMR44340.1;transl_table=11 SOQE01000088.1 Genbank gene 37760 38855 . - . ID=gene-E3V84_09080;Name=E3V84_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09080 SOQE01000088.1 Protein Homology CDS 38784 38855 . - 0 ID=cds-TMR44341.1;Parent=gene-E3V84_09080;Dbxref=NCBI_GP:TMR44341.1;Name=TMR44341.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=E3V84_09080;product=peptide chain release factor 2;protein_id=TMR44341.1;transl_table=11 SOQE01000088.1 Protein Homology CDS 37760 38782 . - 0 ID=cds-TMR44341.1;Parent=gene-E3V84_09080;Dbxref=NCBI_GP:TMR44341.1;Name=TMR44341.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=E3V84_09080;product=peptide chain release factor 2;protein_id=TMR44341.1;transl_table=11 SOQE01000088.1 Genbank gene 38963 39619 . - . ID=gene-E3V84_09085;Name=E3V84_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09085 SOQE01000088.1 Protein Homology CDS 38963 39619 . - 0 ID=cds-TMR44342.1;Parent=gene-E3V84_09085;Dbxref=NCBI_GP:TMR44342.1;Name=TMR44342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358258.1;locus_tag=E3V84_09085;product=CBS domain-containing protein;protein_id=TMR44342.1;transl_table=11 SOQE01000088.1 Genbank gene 39872 40582 . - . ID=gene-E3V84_09090;Name=E3V84_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09090 SOQE01000088.1 Protein Homology CDS 39872 40582 . - 0 ID=cds-TMR44343.1;Parent=gene-E3V84_09090;Dbxref=NCBI_GP:TMR44343.1;Name=TMR44343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=E3V84_09090;product=ABC transporter ATP-binding protein;protein_id=TMR44343.1;transl_table=11 SOQE01000088.1 Genbank gene 40582 41346 . - . ID=gene-E3V84_09095;Name=E3V84_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09095 SOQE01000088.1 Protein Homology CDS 40582 41346 . - 0 ID=cds-TMR44344.1;Parent=gene-E3V84_09095;Dbxref=NCBI_GP:TMR44344.1;Name=TMR44344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=E3V84_09095;product=ABC transporter ATP-binding protein;protein_id=TMR44344.1;transl_table=11 SOQE01000088.1 Genbank gene 41346 42302 . - . ID=gene-E3V84_09100;Name=E3V84_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09100 SOQE01000088.1 Protein Homology CDS 41346 42302 . - 0 ID=cds-TMR44345.1;Parent=gene-E3V84_09100;Dbxref=NCBI_GP:TMR44345.1;Name=TMR44345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358255.1;locus_tag=E3V84_09100;product=branched-chain amino acid ABC transporter permease;protein_id=TMR44345.1;transl_table=11 SOQE01000088.1 Genbank gene 42306 43175 . - . ID=gene-E3V84_09105;Name=E3V84_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09105 SOQE01000088.1 Protein Homology CDS 42306 43175 . - 0 ID=cds-TMR44346.1;Parent=gene-E3V84_09105;Dbxref=NCBI_GP:TMR44346.1;Name=TMR44346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446516.1;locus_tag=E3V84_09105;product=branched-chain amino acid ABC transporter permease;protein_id=TMR44346.1;transl_table=11 SOQE01000088.1 Genbank gene 43292 44452 . - . ID=gene-E3V84_09110;Name=E3V84_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09110 SOQE01000088.1 Protein Homology CDS 43292 44452 . - 0 ID=cds-TMR44347.1;Parent=gene-E3V84_09110;Dbxref=NCBI_GP:TMR44347.1;Name=TMR44347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358253.1;locus_tag=E3V84_09110;product=ABC transporter substrate-binding protein;protein_id=TMR44347.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 44554 44756 . - . ID=gene-E3V84_09115;Name=E3V84_09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09115;pseudo=true SOQE01000088.1 Protein Homology CDS 44554 44756 . - 0 ID=cds-E3V84_09115;Parent=gene-E3V84_09115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358251.1;locus_tag=E3V84_09115;product=DUF2129 domain-containing protein;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 44740 44838 . + . ID=gene-E3V84_09120;Name=E3V84_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09120 SOQE01000088.1 Protein Homology CDS 44740 44838 . + 0 ID=cds-TMR44348.1;Parent=gene-E3V84_09120;Dbxref=NCBI_GP:TMR44348.1;Name=TMR44348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809256.1;locus_tag=E3V84_09120;product=Clp protease;protein_id=TMR44348.1;transl_table=11 SOQE01000088.1 Genbank gene 44835 45425 . - . ID=gene-E3V84_09125;Name=E3V84_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09125 SOQE01000088.1 Protein Homology CDS 44835 45425 . - 0 ID=cds-TMR44349.1;Parent=gene-E3V84_09125;Dbxref=NCBI_GP:TMR44349.1;Name=TMR44349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446519.1;locus_tag=E3V84_09125;product=ATP-dependent Clp protease proteolytic subunit;protein_id=TMR44349.1;transl_table=11 SOQE01000088.1 Genbank gene 45599 46228 . - . ID=gene-E3V84_09130;Name=E3V84_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09130 SOQE01000088.1 Protein Homology CDS 45599 46228 . - 0 ID=cds-TMR44350.1;Parent=gene-E3V84_09130;Dbxref=NCBI_GP:TMR44350.1;Name=TMR44350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446520.1;locus_tag=E3V84_09130;product=uracil phosphoribosyltransferase;protein_id=TMR44350.1;transl_table=11 SOQE01000088.1 Genbank gene 46317 46784 . - . ID=gene-E3V84_09135;Name=E3V84_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09135 SOQE01000088.1 Protein Homology CDS 46317 46784 . - 0 ID=cds-TMR44351.1;Parent=gene-E3V84_09135;Dbxref=NCBI_GP:TMR44351.1;Name=TMR44351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358248.1;locus_tag=E3V84_09135;product=deoxycytidylate deaminase;protein_id=TMR44351.1;transl_table=11 SOQE01000088.1 Genbank gene 46803 47360 . - . ID=gene-E3V84_09140;Name=E3V84_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09140 SOQE01000088.1 Protein Homology CDS 46803 47360 . - 0 ID=cds-TMR44352.1;Parent=gene-E3V84_09140;Dbxref=NCBI_GP:TMR44352.1;Name=TMR44352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358247.1;locus_tag=E3V84_09140;product=TetR/AcrR family transcriptional regulator;protein_id=TMR44352.1;transl_table=11 SOQE01000088.1 Genbank gene 47485 48330 . + . ID=gene-E3V84_09145;Name=E3V84_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09145 SOQE01000088.1 Protein Homology CDS 47485 48330 . + 0 ID=cds-TMR44353.1;Parent=gene-E3V84_09145;Dbxref=NCBI_GP:TMR44353.1;Name=TMR44353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358246.1;locus_tag=E3V84_09145;product=DegV family protein;protein_id=TMR44353.1;transl_table=11 SOQE01000088.1 Genbank gene 48389 49564 . + . ID=gene-E3V84_09150;Name=E3V84_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09150 SOQE01000088.1 Protein Homology CDS 48389 49564 . + 0 ID=cds-TMR44354.1;Parent=gene-E3V84_09150;Dbxref=NCBI_GP:TMR44354.1;Name=TMR44354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677051.1;locus_tag=E3V84_09150;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=TMR44354.1;transl_table=11 SOQE01000088.1 Genbank gene 49607 50347 . - . ID=gene-E3V84_09155;Name=E3V84_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09155 SOQE01000088.1 Protein Homology CDS 49607 50347 . - 0 ID=cds-TMR44355.1;Parent=gene-E3V84_09155;Dbxref=NCBI_GP:TMR44355.1;Name=TMR44355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446527.1;locus_tag=E3V84_09155;product=MerR family transcriptional regulator;protein_id=TMR44355.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 50367 50469 . + . ID=gene-E3V84_09160;Name=E3V84_09160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09160;pseudo=true SOQE01000088.1 Protein Homology CDS 50367 50469 . + 0 ID=cds-E3V84_09160;Parent=gene-E3V84_09160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V84_09160;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000088.1 Genbank pseudogene 50687 52026 . + . ID=gene-E3V84_09165;Name=E3V84_09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09165;pseudo=true SOQE01000088.1 Protein Homology CDS 50687 52026 . + 0 ID=cds-E3V84_09165;Parent=gene-E3V84_09165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446528.1;locus_tag=E3V84_09165;product=sodium-dependent transporter;pseudo=true;transl_table=11 SOQE01000088.1 Genbank gene 52066 53010 . - . ID=gene-E3V84_09170;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=E3V84_09170 SOQE01000088.1 Protein Homology CDS 52066 53010 . - 0 ID=cds-TMR44356.1;Parent=gene-E3V84_09170;Dbxref=NCBI_GP:TMR44356.1;Name=TMR44356.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446529.1;locus_tag=E3V84_09170;product=mannose-6-phosphate isomerase%2C class I;protein_id=TMR44356.1;transl_table=11 SOQE01000088.1 Genbank gene 53131 53427 . - . ID=gene-E3V84_09175;Name=E3V84_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09175 SOQE01000088.1 Protein Homology CDS 53131 53427 . - 0 ID=cds-TMR44357.1;Parent=gene-E3V84_09175;Dbxref=NCBI_GP:TMR44357.1;Name=TMR44357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380707.1;locus_tag=E3V84_09175;product=glycosyl hydrolase family protein;protein_id=TMR44357.1;transl_table=11 SOQE01000088.1 Genbank pseudogene 53492 53998 . + . ID=gene-E3V84_09180;Name=E3V84_09180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09180;pseudo=true SOQE01000088.1 Protein Homology CDS 53492 53998 . + 0 ID=cds-E3V84_09180;Parent=gene-E3V84_09180;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_09180;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000089.1 1 8174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000089.1 Genbank region 1 8174 . + . ID=SOQE01000089.1:1..8174;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000089.1 Genbank pseudogene 1 651 . + . ID=gene-E3V84_09185;Name=E3V84_09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09185;pseudo=true SOQE01000089.1 Protein Homology CDS 1 651 . + 0 ID=cds-E3V84_09185;Parent=gene-E3V84_09185;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V84_09185;product=IS30 family transposase;pseudo=true;transl_table=11 SOQE01000089.1 Genbank pseudogene 652 932 . + . ID=gene-E3V84_09190;Name=E3V84_09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09190;pseudo=true SOQE01000089.1 Protein Homology CDS 652 932 . + 0 ID=cds-E3V84_09190;Parent=gene-E3V84_09190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855238.1;locus_tag=E3V84_09190;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000089.1 Genbank gene 1053 1931 . + . ID=gene-E3V84_09195;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=E3V84_09195 SOQE01000089.1 Protein Homology CDS 1053 1931 . + 0 ID=cds-TMR44277.1;Parent=gene-E3V84_09195;Dbxref=NCBI_GP:TMR44277.1;Name=TMR44277.1;gbkey=CDS;gene=mvk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357932.1;locus_tag=E3V84_09195;product=mevalonate kinase;protein_id=TMR44277.1;transl_table=11 SOQE01000089.1 Genbank gene 1913 2866 . + . ID=gene-E3V84_09200;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=E3V84_09200 SOQE01000089.1 Protein Homology CDS 1913 2866 . + 0 ID=cds-TMR44278.1;Parent=gene-E3V84_09200;Dbxref=NCBI_GP:TMR44278.1;Name=TMR44278.1;gbkey=CDS;gene=mvaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446847.1;locus_tag=E3V84_09200;product=diphosphomevalonate decarboxylase;protein_id=TMR44278.1;transl_table=11 SOQE01000089.1 Genbank gene 2853 3860 . + . ID=gene-E3V84_09205;Name=E3V84_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09205 SOQE01000089.1 Protein Homology CDS 2853 3860 . + 0 ID=cds-TMR44279.1;Parent=gene-E3V84_09205;Dbxref=NCBI_GP:TMR44279.1;Name=TMR44279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446846.1;locus_tag=E3V84_09205;product=phosphomevalonate kinase;protein_id=TMR44279.1;transl_table=11 SOQE01000089.1 Genbank gene 3844 4854 . + . ID=gene-E3V84_09210;Name=E3V84_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09210 SOQE01000089.1 Protein Homology CDS 3844 4854 . + 0 ID=cds-TMR44280.1;Parent=gene-E3V84_09210;Dbxref=NCBI_GP:TMR44280.1;Name=TMR44280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357935.1;locus_tag=E3V84_09210;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=TMR44280.1;transl_table=11 SOQE01000089.1 Genbank gene 4931 5629 . + . ID=gene-E3V84_09215;Name=E3V84_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09215 SOQE01000089.1 Protein Homology CDS 4931 5629 . + 0 ID=cds-TMR44281.1;Parent=gene-E3V84_09215;Dbxref=NCBI_GP:TMR44281.1;Name=TMR44281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446844.1;locus_tag=E3V84_09215;product=transporter;protein_id=TMR44281.1;transl_table=11 SOQE01000089.1 Genbank gene 5626 6621 . + . ID=gene-E3V84_09220;Name=E3V84_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09220 SOQE01000089.1 Protein Homology CDS 5626 6621 . + 0 ID=cds-TMR44282.1;Parent=gene-E3V84_09220;Dbxref=NCBI_GP:TMR44282.1;Name=TMR44282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357937.1;locus_tag=E3V84_09220;product=sensor histidine kinase;protein_id=TMR44282.1;transl_table=11 SOQE01000089.1 Genbank gene 6635 7267 . + . ID=gene-E3V84_09225;Name=E3V84_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09225 SOQE01000089.1 Protein Homology CDS 6635 7267 . + 0 ID=cds-TMR44283.1;Parent=gene-E3V84_09225;Dbxref=NCBI_GP:TMR44283.1;Name=TMR44283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446842.1;locus_tag=E3V84_09225;product=response regulator transcription factor;protein_id=TMR44283.1;transl_table=11 SOQE01000089.1 Genbank pseudogene 7268 7508 . + . ID=gene-E3V84_09230;Name=E3V84_09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09230;pseudo=true SOQE01000089.1 Protein Homology CDS 7268 7508 . + 0 ID=cds-E3V84_09230;Parent=gene-E3V84_09230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812384.1;locus_tag=E3V84_09230;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQE01000089.1 Genbank gene 7433 7930 . + . ID=gene-E3V84_09235;Name=E3V84_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09235 SOQE01000089.1 Protein Homology CDS 7433 7930 . + 0 ID=cds-TMR44284.1;Parent=gene-E3V84_09235;Dbxref=NCBI_GP:TMR44284.1;Name=TMR44284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446841.1;locus_tag=E3V84_09235;product=DNA alkylation repair protein;protein_id=TMR44284.1;transl_table=11 ##sequence-region SOQE01000009.1 1 7997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000009.1 Genbank region 1 7997 . + . ID=SOQE01000009.1:1..7997;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000009.1 Genbank gene 96 3224 . + . ID=gene-E3V84_00800;Name=E3V84_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00800 SOQE01000009.1 Protein Homology CDS 96 3224 . + 0 ID=cds-TMR48609.1;Parent=gene-E3V84_00800;Dbxref=NCBI_GP:TMR48609.1;Name=TMR48609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358389.1;locus_tag=E3V84_00800;product=DNA polymerase III subunit alpha;protein_id=TMR48609.1;transl_table=11 SOQE01000009.1 Genbank gene 3307 4314 . + . ID=gene-E3V84_00805;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=E3V84_00805 SOQE01000009.1 Protein Homology CDS 3307 4314 . + 0 ID=cds-TMR48610.1;Parent=gene-E3V84_00805;Dbxref=NCBI_GP:TMR48610.1;Name=TMR48610.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358390.1;locus_tag=E3V84_00805;product=6-phosphofructokinase;protein_id=TMR48610.1;transl_table=11 SOQE01000009.1 Genbank gene 4373 5878 . + . ID=gene-E3V84_00810;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=E3V84_00810 SOQE01000009.1 Protein Homology CDS 4373 5878 . + 0 ID=cds-TMR48611.1;Parent=gene-E3V84_00810;Dbxref=NCBI_GP:TMR48611.1;Name=TMR48611.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358391.1;locus_tag=E3V84_00810;product=pyruvate kinase;protein_id=TMR48611.1;transl_table=11 SOQE01000009.1 Genbank pseudogene 5969 7235 . - . ID=gene-E3V84_00815;Name=E3V84_00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_00815;pseudo=true SOQE01000009.1 Protein Homology CDS 5969 7235 . - 0 ID=cds-E3V84_00815;Parent=gene-E3V84_00815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V84_00815;product=transposase;pseudo=true;transl_table=11 SOQE01000009.1 Genbank gene 7285 7542 . - . ID=gene-E3V84_00820;Name=E3V84_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00820 SOQE01000009.1 Protein Homology CDS 7285 7542 . - 0 ID=cds-TMR48612.1;Parent=gene-E3V84_00820;Dbxref=NCBI_GP:TMR48612.1;Name=TMR48612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V84_00820;product=hypothetical protein;protein_id=TMR48612.1;transl_table=11 SOQE01000009.1 Genbank gene 7619 7846 . - . ID=gene-E3V84_00825;Name=E3V84_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_00825 SOQE01000009.1 Protein Homology CDS 7619 7846 . - 0 ID=cds-TMR48613.1;Parent=gene-E3V84_00825;Dbxref=NCBI_GP:TMR48613.1;Name=TMR48613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167984.1;locus_tag=E3V84_00825;product=integrase;protein_id=TMR48613.1;transl_table=11 ##sequence-region SOQE01000090.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000090.1 Genbank region 1 650 . + . ID=SOQE01000090.1:1..650;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000090.1 Genbank gene 330 608 . + . ID=gene-E3V84_09240;Name=E3V84_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09240 SOQE01000090.1 Protein Homology CDS 330 608 . + 0 ID=cds-TMR44275.1;Parent=gene-E3V84_09240;Dbxref=NCBI_GP:TMR44275.1;Name=TMR44275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134981.1;locus_tag=E3V84_09240;product=hypothetical protein;protein_id=TMR44275.1;transl_table=11 ##sequence-region SOQE01000091.1 1 99145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000091.1 Genbank region 1 99145 . + . ID=SOQE01000091.1:1..99145;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000091.1 Genbank gene 1 159 . + . ID=gene-E3V84_09245;Name=E3V84_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09245;partial=true;start_range=.,1 SOQE01000091.1 Protein Homology CDS 1 159 . + 0 ID=cds-TMR43944.1;Parent=gene-E3V84_09245;Dbxref=NCBI_GP:TMR43944.1;Name=TMR43944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03050.12;locus_tag=E3V84_09245;partial=true;product=IS66 family transposase;protein_id=TMR43944.1;start_range=.,1;transl_table=11 SOQE01000091.1 Genbank gene 230 388 . + . ID=gene-E3V84_09250;Name=E3V84_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09250 SOQE01000091.1 Protein Homology CDS 230 388 . + 0 ID=cds-TMR44037.1;Parent=gene-E3V84_09250;Dbxref=NCBI_GP:TMR44037.1;Name=TMR44037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_09250;product=transposase domain-containing protein;protein_id=TMR44037.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 479 1820 . - . ID=gene-E3V84_09255;Name=E3V84_09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09255;pseudo=true SOQE01000091.1 Protein Homology CDS 479 1820 . - 0 ID=cds-E3V84_09255;Parent=gene-E3V84_09255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V84_09255;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQE01000091.1 Genbank gene 2286 3314 . - . ID=gene-E3V84_09260;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=E3V84_09260 SOQE01000091.1 Protein Homology CDS 2286 3314 . - 0 ID=cds-TMR44038.1;Parent=gene-E3V84_09260;Dbxref=NCBI_GP:TMR44038.1;Name=TMR44038.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445828.1;locus_tag=E3V84_09260;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=TMR44038.1;transl_table=11 SOQE01000091.1 Genbank gene 3465 4172 . + . ID=gene-E3V84_09265;Name=E3V84_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09265 SOQE01000091.1 Protein Homology CDS 3465 4172 . + 0 ID=cds-TMR43945.1;Parent=gene-E3V84_09265;Dbxref=NCBI_GP:TMR43945.1;Name=TMR43945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445829.1;locus_tag=E3V84_09265;product=glucosamine-6-phosphate deaminase;protein_id=TMR43945.1;transl_table=11 SOQE01000091.1 Genbank gene 4311 4487 . + . ID=gene-E3V84_09270;Name=E3V84_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09270 SOQE01000091.1 Protein Homology CDS 4311 4487 . + 0 ID=cds-TMR43946.1;Parent=gene-E3V84_09270;Dbxref=NCBI_GP:TMR43946.1;Name=TMR43946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445830.1;locus_tag=E3V84_09270;product=30S ribosomal protein S21;protein_id=TMR43946.1;transl_table=11 SOQE01000091.1 Genbank gene 4754 5704 . + . ID=gene-E3V84_09275;Name=E3V84_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09275 SOQE01000091.1 Protein Homology CDS 4754 5704 . + 0 ID=cds-TMR43947.1;Parent=gene-E3V84_09275;Dbxref=NCBI_GP:TMR43947.1;Name=TMR43947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358863.1;locus_tag=E3V84_09275;product=HPr kinase/phosphorylase;protein_id=TMR43947.1;transl_table=11 SOQE01000091.1 Genbank gene 5697 6485 . + . ID=gene-E3V84_09280;Name=E3V84_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09280 SOQE01000091.1 Protein Homology CDS 5697 6485 . + 0 ID=cds-TMR43948.1;Parent=gene-E3V84_09280;Dbxref=NCBI_GP:TMR43948.1;Name=TMR43948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445832.1;locus_tag=E3V84_09280;product=prolipoprotein diacylglyceryl transferase;protein_id=TMR43948.1;transl_table=11 SOQE01000091.1 Genbank gene 6486 6869 . + . ID=gene-E3V84_09285;Name=E3V84_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09285 SOQE01000091.1 Protein Homology CDS 6486 6869 . + 0 ID=cds-TMR43949.1;Parent=gene-E3V84_09285;Dbxref=NCBI_GP:TMR43949.1;Name=TMR43949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358861.1;locus_tag=E3V84_09285;product=DUF948 domain-containing protein;protein_id=TMR43949.1;transl_table=11 SOQE01000091.1 Genbank gene 6885 7280 . + . ID=gene-E3V84_09290;Name=E3V84_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09290 SOQE01000091.1 Protein Homology CDS 6885 7280 . + 0 ID=cds-TMR43950.1;Parent=gene-E3V84_09290;Dbxref=NCBI_GP:TMR43950.1;Name=TMR43950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517366.1;locus_tag=E3V84_09290;product=YtxH domain-containing protein;protein_id=TMR43950.1;transl_table=11 SOQE01000091.1 Genbank gene 7639 11736 . + . ID=gene-E3V84_09295;Name=E3V84_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09295 SOQE01000091.1 Protein Homology CDS 7639 11736 . + 0 ID=cds-TMR43951.1;Parent=gene-E3V84_09295;Dbxref=NCBI_GP:TMR43951.1;Name=TMR43951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651637.1;locus_tag=E3V84_09295;product=YSIRK-type signal peptide-containing protein;protein_id=TMR43951.1;transl_table=11 SOQE01000091.1 Genbank gene 11912 13042 . + . ID=gene-E3V84_09300;Name=E3V84_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09300 SOQE01000091.1 Protein Homology CDS 11912 13042 . + 0 ID=cds-TMR43952.1;Parent=gene-E3V84_09300;Dbxref=NCBI_GP:TMR43952.1;Name=TMR43952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445835.1;locus_tag=E3V84_09300;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=TMR43952.1;transl_table=11 SOQE01000091.1 Genbank gene 13047 13784 . + . ID=gene-E3V84_09305;Name=E3V84_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09305 SOQE01000091.1 Protein Homology CDS 13047 13784 . + 0 ID=cds-TMR43953.1;Parent=gene-E3V84_09305;Dbxref=NCBI_GP:TMR43953.1;Name=TMR43953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524776.1;locus_tag=E3V84_09305;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=TMR43953.1;transl_table=11 SOQE01000091.1 Genbank gene 13795 14568 . + . ID=gene-E3V84_09310;Name=E3V84_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09310 SOQE01000091.1 Protein Homology CDS 13795 14568 . + 0 ID=cds-TMR43954.1;Parent=gene-E3V84_09310;Dbxref=NCBI_GP:TMR43954.1;Name=TMR43954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445837.1;locus_tag=E3V84_09310;product=TIGR01457 family HAD-type hydrolase;protein_id=TMR43954.1;transl_table=11 SOQE01000091.1 Genbank gene 14558 15175 . + . ID=gene-E3V84_09315;Name=E3V84_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09315 SOQE01000091.1 Protein Homology CDS 14558 15175 . + 0 ID=cds-TMR43955.1;Parent=gene-E3V84_09315;Dbxref=NCBI_GP:TMR43955.1;Name=TMR43955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445838.1;locus_tag=E3V84_09315;product=TIGR01906 family membrane protein;protein_id=TMR43955.1;transl_table=11 SOQE01000091.1 Genbank gene 15386 15787 . + . ID=gene-E3V84_09320;Name=E3V84_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09320 SOQE01000091.1 Protein Homology CDS 15386 15787 . + 0 ID=cds-TMR43956.1;Parent=gene-E3V84_09320;Dbxref=NCBI_GP:TMR43956.1;Name=TMR43956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358855.1;locus_tag=E3V84_09320;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=TMR43956.1;transl_table=11 SOQE01000091.1 Genbank gene 15787 16065 . + . ID=gene-E3V84_09325;Name=E3V84_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09325 SOQE01000091.1 Protein Homology CDS 15787 16065 . + 0 ID=cds-TMR43957.1;Parent=gene-E3V84_09325;Dbxref=NCBI_GP:TMR43957.1;Name=TMR43957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358854.1;locus_tag=E3V84_09325;product=UPF0223 family protein;protein_id=TMR43957.1;transl_table=11 SOQE01000091.1 Genbank gene 16055 16828 . + . ID=gene-E3V84_09330;Name=E3V84_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09330 SOQE01000091.1 Protein Homology CDS 16055 16828 . + 0 ID=cds-TMR43958.1;Parent=gene-E3V84_09330;Dbxref=NCBI_GP:TMR43958.1;Name=TMR43958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445845.1;locus_tag=E3V84_09330;product=inositol monophosphatase family protein;protein_id=TMR43958.1;transl_table=11 SOQE01000091.1 Genbank gene 16829 18133 . + . ID=gene-E3V84_09335;Name=E3V84_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09335 SOQE01000091.1 Protein Homology CDS 16829 18133 . + 0 ID=cds-TMR43959.1;Parent=gene-E3V84_09335;Dbxref=NCBI_GP:TMR43959.1;Name=TMR43959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445846.1;locus_tag=E3V84_09335;product=23S rRNA methyltransferase;protein_id=TMR43959.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 18313 18445 . + . ID=gene-E3V84_09340;Name=E3V84_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09340;pseudo=true SOQE01000091.1 Protein Homology CDS 18313 18445 . + 0 ID=cds-E3V84_09340;Parent=gene-E3V84_09340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V84_09340;product=lysyl-tRNA synthetase;pseudo=true;transl_table=11 SOQE01000091.1 Genbank gene 18819 19697 . + . ID=gene-E3V84_09345;Name=E3V84_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09345 SOQE01000091.1 Protein Homology CDS 18819 19697 . + 0 ID=cds-TMR43960.1;Parent=gene-E3V84_09345;Dbxref=NCBI_GP:TMR43960.1;Name=TMR43960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358850.1;locus_tag=E3V84_09345;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=TMR43960.1;transl_table=11 SOQE01000091.1 Genbank gene 19697 20614 . + . ID=gene-E3V84_09350;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=E3V84_09350 SOQE01000091.1 Protein Homology CDS 19697 20614 . + 0 ID=cds-TMR43961.1;Parent=gene-E3V84_09350;Dbxref=NCBI_GP:TMR43961.1;Name=TMR43961.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358849.1;locus_tag=E3V84_09350;product=phosphate ABC transporter permease subunit PstC;protein_id=TMR43961.1;transl_table=11 SOQE01000091.1 Genbank gene 20604 21488 . + . ID=gene-E3V84_09355;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=E3V84_09355 SOQE01000091.1 Protein Homology CDS 20604 21488 . + 0 ID=cds-TMR43962.1;Parent=gene-E3V84_09355;Dbxref=NCBI_GP:TMR43962.1;Name=TMR43962.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001201787.1;locus_tag=E3V84_09355;product=phosphate ABC transporter permease PstA;protein_id=TMR43962.1;transl_table=11 SOQE01000091.1 Genbank gene 21499 22302 . + . ID=gene-E3V84_09360;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V84_09360 SOQE01000091.1 Protein Homology CDS 21499 22302 . + 0 ID=cds-TMR43963.1;Parent=gene-E3V84_09360;Dbxref=NCBI_GP:TMR43963.1;Name=TMR43963.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358847.1;locus_tag=E3V84_09360;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR43963.1;transl_table=11 SOQE01000091.1 Genbank gene 22315 23073 . + . ID=gene-E3V84_09365;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V84_09365 SOQE01000091.1 Protein Homology CDS 22315 23073 . + 0 ID=cds-TMR43964.1;Parent=gene-E3V84_09365;Dbxref=NCBI_GP:TMR43964.1;Name=TMR43964.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358846.1;locus_tag=E3V84_09365;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR43964.1;transl_table=11 SOQE01000091.1 Genbank gene 23085 23738 . + . ID=gene-E3V84_09370;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=E3V84_09370 SOQE01000091.1 Protein Homology CDS 23085 23738 . + 0 ID=cds-TMR43965.1;Parent=gene-E3V84_09370;Dbxref=NCBI_GP:TMR43965.1;Name=TMR43965.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358845.1;locus_tag=E3V84_09370;product=phosphate signaling complex protein PhoU;protein_id=TMR43965.1;transl_table=11 SOQE01000091.1 Genbank gene 23830 24297 . + . ID=gene-E3V84_09375;Name=E3V84_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09375 SOQE01000091.1 Protein Homology CDS 23830 24297 . + 0 ID=cds-TMR43966.1;Parent=gene-E3V84_09375;Dbxref=NCBI_GP:TMR43966.1;Name=TMR43966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371660.1;locus_tag=E3V84_09375;product=NUDIX domain-containing protein;protein_id=TMR43966.1;transl_table=11 SOQE01000091.1 Genbank gene 24417 25232 . + . ID=gene-E3V84_09380;Name=E3V84_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09380 SOQE01000091.1 Protein Homology CDS 24417 25232 . + 0 ID=cds-TMR43967.1;Parent=gene-E3V84_09380;Dbxref=NCBI_GP:TMR43967.1;Name=TMR43967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358844.1;locus_tag=E3V84_09380;product=transporter substrate-binding domain-containing protein;protein_id=TMR43967.1;transl_table=11 SOQE01000091.1 Genbank gene 25252 26523 . - . ID=gene-E3V84_09385;Name=E3V84_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09385 SOQE01000091.1 Protein Homology CDS 25252 26523 . - 0 ID=cds-TMR43968.1;Parent=gene-E3V84_09385;Dbxref=NCBI_GP:TMR43968.1;Name=TMR43968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358843.1;locus_tag=E3V84_09385;product=PLP-dependent aminotransferase family protein;protein_id=TMR43968.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 26997 27461 . + . ID=gene-E3V84_09390;Name=E3V84_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09390;pseudo=true SOQE01000091.1 Protein Homology CDS 26997 27461 . + 0 ID=cds-E3V84_09390;Parent=gene-E3V84_09390;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669430.1;locus_tag=E3V84_09390;product=streptococcin A-M57;pseudo=true;transl_table=11 SOQE01000091.1 Genbank gene 27945 28676 . + . ID=gene-E3V84_09395;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=E3V84_09395 SOQE01000091.1 Protein Homology CDS 27945 28676 . + 0 ID=cds-TMR43969.1;Parent=gene-E3V84_09395;Dbxref=NCBI_GP:TMR43969.1;Name=TMR43969.1;gbkey=CDS;gene=budA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358842.1;locus_tag=E3V84_09395;product=acetolactate decarboxylase;protein_id=TMR43969.1;transl_table=11 SOQE01000091.1 Genbank gene 28686 29438 . + . ID=gene-E3V84_09400;Name=E3V84_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09400 SOQE01000091.1 Protein Homology CDS 28686 29438 . + 0 ID=cds-TMR43970.1;Parent=gene-E3V84_09400;Dbxref=NCBI_GP:TMR43970.1;Name=TMR43970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358841.1;locus_tag=E3V84_09400;product=YhfC family intramembrane metalloprotease;protein_id=TMR43970.1;transl_table=11 SOQE01000091.1 Genbank gene 29550 30455 . + . ID=gene-E3V84_09405;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=E3V84_09405 SOQE01000091.1 Protein Homology CDS 29550 30455 . + 0 ID=cds-TMR43971.1;Parent=gene-E3V84_09405;Dbxref=NCBI_GP:TMR43971.1;Name=TMR43971.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445857.1;locus_tag=E3V84_09405;product=UDP-N-acetylmuramate dehydrogenase;protein_id=TMR43971.1;transl_table=11 SOQE01000091.1 Genbank gene 30615 31772 . + . ID=gene-E3V84_09410;Name=E3V84_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09410 SOQE01000091.1 Protein Homology CDS 30615 31772 . + 0 ID=cds-TMR43972.1;Parent=gene-E3V84_09410;Dbxref=NCBI_GP:TMR43972.1;Name=TMR43972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358839.1;locus_tag=E3V84_09410;product=ABC transporter ATP-binding protein;protein_id=TMR43972.1;transl_table=11 SOQE01000091.1 Genbank gene 31753 32559 . + . ID=gene-E3V84_09415;Name=E3V84_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09415 SOQE01000091.1 Protein Homology CDS 31753 32559 . + 0 ID=cds-TMR43973.1;Parent=gene-E3V84_09415;Dbxref=NCBI_GP:TMR43973.1;Name=TMR43973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445859.1;locus_tag=E3V84_09415;product=ABC transporter permease;protein_id=TMR43973.1;transl_table=11 SOQE01000091.1 Genbank gene 32556 33329 . + . ID=gene-E3V84_09420;Name=E3V84_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09420 SOQE01000091.1 Protein Homology CDS 32556 33329 . + 0 ID=cds-TMR43974.1;Parent=gene-E3V84_09420;Dbxref=NCBI_GP:TMR43974.1;Name=TMR43974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358837.1;locus_tag=E3V84_09420;product=ABC transporter permease;protein_id=TMR43974.1;transl_table=11 SOQE01000091.1 Genbank gene 33326 34396 . + . ID=gene-E3V84_09425;Name=E3V84_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09425 SOQE01000091.1 Protein Homology CDS 33326 34396 . + 0 ID=cds-TMR43975.1;Parent=gene-E3V84_09425;Dbxref=NCBI_GP:TMR43975.1;Name=TMR43975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445861.1;locus_tag=E3V84_09425;product=ABC transporter substrate-binding protein;protein_id=TMR43975.1;transl_table=11 SOQE01000091.1 Genbank gene 34549 35082 . + . ID=gene-E3V84_09430;Name=E3V84_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09430 SOQE01000091.1 GeneMarkS-2+ CDS 34549 35082 . + 0 ID=cds-TMR43976.1;Parent=gene-E3V84_09430;Dbxref=NCBI_GP:TMR43976.1;Name=TMR43976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_09430;product=hypothetical protein;protein_id=TMR43976.1;transl_table=11 SOQE01000091.1 Genbank gene 35596 36081 . + . ID=gene-E3V84_09435;Name=E3V84_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09435 SOQE01000091.1 Protein Homology CDS 35596 36081 . + 0 ID=cds-TMR43977.1;Parent=gene-E3V84_09435;Dbxref=NCBI_GP:TMR43977.1;Name=TMR43977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445863.1;locus_tag=E3V84_09435;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=TMR43977.1;transl_table=11 SOQE01000091.1 Genbank gene 36103 38721 . + . ID=gene-E3V84_09440;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=E3V84_09440 SOQE01000091.1 Protein Homology CDS 36103 38721 . + 0 ID=cds-TMR43978.1;Parent=gene-E3V84_09440;Dbxref=NCBI_GP:TMR43978.1;Name=TMR43978.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358833.1;locus_tag=E3V84_09440;product=alanine--tRNA ligase;protein_id=TMR43978.1;transl_table=11 SOQE01000091.1 Genbank gene 38811 40265 . - . ID=gene-E3V84_09445;Name=E3V84_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09445 SOQE01000091.1 Protein Homology CDS 38811 40265 . - 0 ID=cds-TMR43979.1;Parent=gene-E3V84_09445;Dbxref=NCBI_GP:TMR43979.1;Name=TMR43979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445865.1;locus_tag=E3V84_09445;product=alpha-amylase;protein_id=TMR43979.1;transl_table=11 SOQE01000091.1 Genbank gene 40445 41194 . + . ID=gene-E3V84_09450;Name=E3V84_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09450 SOQE01000091.1 Protein Homology CDS 40445 41194 . + 0 ID=cds-TMR43980.1;Parent=gene-E3V84_09450;Dbxref=NCBI_GP:TMR43980.1;Name=TMR43980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445866.1;locus_tag=E3V84_09450;product=ABC transporter ATP-binding protein;protein_id=TMR43980.1;transl_table=11 SOQE01000091.1 Genbank gene 41175 42809 . + . ID=gene-E3V84_09455;Name=E3V84_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09455 SOQE01000091.1 Protein Homology CDS 41175 42809 . + 0 ID=cds-TMR43981.1;Parent=gene-E3V84_09455;Dbxref=NCBI_GP:TMR43981.1;Name=TMR43981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445867.1;locus_tag=E3V84_09455;product=hypothetical protein;protein_id=TMR43981.1;transl_table=11 SOQE01000091.1 Genbank gene 42881 43141 . + . ID=gene-E3V84_09460;Name=E3V84_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09460 SOQE01000091.1 Protein Homology CDS 42881 43141 . + 0 ID=cds-TMR43982.1;Parent=gene-E3V84_09460;Dbxref=NCBI_GP:TMR43982.1;Name=TMR43982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590366.1;locus_tag=E3V84_09460;product=hypothetical protein;protein_id=TMR43982.1;transl_table=11 SOQE01000091.1 Genbank gene 43295 43555 . - . ID=gene-E3V84_09465;Name=E3V84_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09465 SOQE01000091.1 Protein Homology CDS 43295 43555 . - 0 ID=cds-TMR43983.1;Parent=gene-E3V84_09465;Dbxref=NCBI_GP:TMR43983.1;Name=TMR43983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694306.1;locus_tag=E3V84_09465;product=hypothetical protein;protein_id=TMR43983.1;transl_table=11 SOQE01000091.1 Genbank gene 43572 45722 . - . ID=gene-E3V84_09470;Name=E3V84_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09470 SOQE01000091.1 Protein Homology CDS 43572 45722 . - 0 ID=cds-TMR43984.1;Parent=gene-E3V84_09470;Dbxref=NCBI_GP:TMR43984.1;Name=TMR43984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445868.1;locus_tag=E3V84_09470;product=LTA synthase family protein;protein_id=TMR43984.1;transl_table=11 SOQE01000091.1 Genbank gene 45830 47002 . + . ID=gene-E3V84_09475;Name=E3V84_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09475 SOQE01000091.1 Protein Homology CDS 45830 47002 . + 0 ID=cds-TMR43985.1;Parent=gene-E3V84_09475;Dbxref=NCBI_GP:TMR43985.1;Name=TMR43985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358829.1;locus_tag=E3V84_09475;product=class I SAM-dependent rRNA methyltransferase;protein_id=TMR43985.1;transl_table=11 SOQE01000091.1 Genbank gene 46999 47676 . + . ID=gene-E3V84_09480;Name=E3V84_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09480 SOQE01000091.1 Protein Homology CDS 46999 47676 . + 0 ID=cds-TMR43986.1;Parent=gene-E3V84_09480;Dbxref=NCBI_GP:TMR43986.1;Name=TMR43986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358828.1;locus_tag=E3V84_09480;product=type I 3-dehydroquinate dehydratase;protein_id=TMR43986.1;transl_table=11 SOQE01000091.1 Genbank gene 47666 48520 . + . ID=gene-E3V84_09485;Name=E3V84_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09485 SOQE01000091.1 Protein Homology CDS 47666 48520 . + 0 ID=cds-TMR43987.1;Parent=gene-E3V84_09485;Dbxref=NCBI_GP:TMR43987.1;Name=TMR43987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358827.1;locus_tag=E3V84_09485;product=shikimate dehydrogenase;protein_id=TMR43987.1;transl_table=11 SOQE01000091.1 Genbank gene 48539 49606 . + . ID=gene-E3V84_09490;Name=E3V84_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09490 SOQE01000091.1 Protein Homology CDS 48539 49606 . + 0 ID=cds-TMR43988.1;Parent=gene-E3V84_09490;Dbxref=NCBI_GP:TMR43988.1;Name=TMR43988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358826.1;locus_tag=E3V84_09490;product=3-dehydroquinate synthase;protein_id=TMR43988.1;transl_table=11 SOQE01000091.1 Genbank gene 49616 50782 . + . ID=gene-E3V84_09495;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=E3V84_09495 SOQE01000091.1 Protein Homology CDS 49616 50782 . + 0 ID=cds-TMR43989.1;Parent=gene-E3V84_09495;Dbxref=NCBI_GP:TMR43989.1;Name=TMR43989.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358825.1;locus_tag=E3V84_09495;product=chorismate synthase;protein_id=TMR43989.1;transl_table=11 SOQE01000091.1 Genbank gene 50792 51895 . + . ID=gene-E3V84_09500;Name=E3V84_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09500 SOQE01000091.1 Protein Homology CDS 50792 51895 . + 0 ID=cds-TMR43990.1;Parent=gene-E3V84_09500;Dbxref=NCBI_GP:TMR43990.1;Name=TMR43990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358824.1;locus_tag=E3V84_09500;product=prephenate dehydrogenase;protein_id=TMR43990.1;transl_table=11 SOQE01000091.1 Genbank gene 52299 52499 . + . ID=gene-E3V84_09505;Name=E3V84_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09505 SOQE01000091.1 GeneMarkS-2+ CDS 52299 52499 . + 0 ID=cds-TMR43991.1;Parent=gene-E3V84_09505;Dbxref=NCBI_GP:TMR43991.1;Name=TMR43991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_09505;product=hypothetical protein;protein_id=TMR43991.1;transl_table=11 SOQE01000091.1 Genbank gene 52553 52891 . + . ID=gene-E3V84_09510;Name=E3V84_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09510 SOQE01000091.1 Protein Homology CDS 52553 52891 . + 0 ID=cds-TMR43992.1;Parent=gene-E3V84_09510;Dbxref=NCBI_GP:TMR43992.1;Name=TMR43992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358823.1;locus_tag=E3V84_09510;product=YlbF/YmcA family competence regulator;protein_id=TMR43992.1;transl_table=11 SOQE01000091.1 Genbank gene 52982 54265 . + . ID=gene-E3V84_09515;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=E3V84_09515 SOQE01000091.1 Protein Homology CDS 52982 54265 . + 0 ID=cds-TMR43993.1;Parent=gene-E3V84_09515;Dbxref=NCBI_GP:TMR43993.1;Name=TMR43993.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445878.1;locus_tag=E3V84_09515;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TMR43993.1;transl_table=11 SOQE01000091.1 Genbank gene 54258 54734 . + . ID=gene-E3V84_09520;Name=E3V84_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09520 SOQE01000091.1 Protein Homology CDS 54258 54734 . + 0 ID=cds-TMR43994.1;Parent=gene-E3V84_09520;Dbxref=NCBI_GP:TMR43994.1;Name=TMR43994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358821.1;locus_tag=E3V84_09520;product=shikimate kinase;protein_id=TMR43994.1;transl_table=11 SOQE01000091.1 Genbank gene 54731 55579 . + . ID=gene-E3V84_09525;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=E3V84_09525 SOQE01000091.1 Protein Homology CDS 54731 55579 . + 0 ID=cds-TMR43995.1;Parent=gene-E3V84_09525;Dbxref=NCBI_GP:TMR43995.1;Name=TMR43995.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358820.1;locus_tag=E3V84_09525;product=prephenate dehydratase;protein_id=TMR43995.1;transl_table=11 SOQE01000091.1 Genbank gene 55576 56850 . + . ID=gene-E3V84_09530;Name=psr;gbkey=Gene;gene=psr;gene_biotype=protein_coding;locus_tag=E3V84_09530 SOQE01000091.1 Protein Homology CDS 55576 56850 . + 0 ID=cds-TMR43996.1;Parent=gene-E3V84_09530;Dbxref=NCBI_GP:TMR43996.1;Name=TMR43996.1;gbkey=CDS;gene=psr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358819.1;locus_tag=E3V84_09530;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase Psr;protein_id=TMR43996.1;transl_table=11 SOQE01000091.1 Genbank gene 57129 57974 . + . ID=gene-E3V84_09535;Name=E3V84_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09535 SOQE01000091.1 Protein Homology CDS 57129 57974 . + 0 ID=cds-TMR43997.1;Parent=gene-E3V84_09535;Dbxref=NCBI_GP:TMR43997.1;Name=TMR43997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445882.1;locus_tag=E3V84_09535;product=phosphorylcholine transferase LicD;protein_id=TMR43997.1;transl_table=11 SOQE01000091.1 Genbank gene 57910 59067 . + . ID=gene-E3V84_09540;Name=E3V84_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09540 SOQE01000091.1 Protein Homology CDS 57910 59067 . + 0 ID=cds-TMR43998.1;Parent=gene-E3V84_09540;Dbxref=NCBI_GP:TMR43998.1;Name=TMR43998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358817.1;locus_tag=E3V84_09540;product=glycosyltransferase;protein_id=TMR43998.1;transl_table=11 SOQE01000091.1 Genbank gene 59069 60055 . + . ID=gene-E3V84_09545;Name=E3V84_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09545 SOQE01000091.1 Protein Homology CDS 59069 60055 . + 0 ID=cds-TMR43999.1;Parent=gene-E3V84_09545;Dbxref=NCBI_GP:TMR43999.1;Name=TMR43999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358816.1;locus_tag=E3V84_09545;product=glycosyltransferase family 2 protein;protein_id=TMR43999.1;transl_table=11 SOQE01000091.1 Genbank gene 60071 61540 . + . ID=gene-E3V84_09550;Name=E3V84_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09550 SOQE01000091.1 Protein Homology CDS 60071 61540 . + 0 ID=cds-TMR44000.1;Parent=gene-E3V84_09550;Dbxref=NCBI_GP:TMR44000.1;Name=TMR44000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445885.1;locus_tag=E3V84_09550;product=O-antigen polysaccharide polymerase Wzy;protein_id=TMR44000.1;transl_table=11 SOQE01000091.1 Genbank gene 61533 62567 . + . ID=gene-E3V84_09555;Name=E3V84_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09555 SOQE01000091.1 Protein Homology CDS 61533 62567 . + 0 ID=cds-TMR44001.1;Parent=gene-E3V84_09555;Dbxref=NCBI_GP:TMR44001.1;Name=TMR44001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358814.1;locus_tag=E3V84_09555;product=prephenate dehydratase;protein_id=TMR44001.1;transl_table=11 SOQE01000091.1 Genbank gene 62769 63506 . + . ID=gene-E3V84_09560;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=E3V84_09560 SOQE01000091.1 Protein Homology CDS 62769 63506 . + 0 ID=cds-TMR44002.1;Parent=gene-E3V84_09560;Dbxref=NCBI_GP:TMR44002.1;Name=TMR44002.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358813.1;locus_tag=E3V84_09560;product=adaptor protein MecA;protein_id=TMR44002.1;transl_table=11 SOQE01000091.1 Genbank gene 63427 63624 . - . ID=gene-E3V84_09565;Name=E3V84_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09565 SOQE01000091.1 Protein Homology CDS 63427 63624 . - 0 ID=cds-TMR44039.1;Parent=gene-E3V84_09565;Dbxref=NCBI_GP:TMR44039.1;Name=TMR44039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001853345.1;locus_tag=E3V84_09565;product=hypothetical protein;protein_id=TMR44039.1;transl_table=11 SOQE01000091.1 Genbank gene 63659 64945 . + . ID=gene-E3V84_09570;Name=E3V84_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09570 SOQE01000091.1 Protein Homology CDS 63659 64945 . + 0 ID=cds-TMR44003.1;Parent=gene-E3V84_09570;Dbxref=NCBI_GP:TMR44003.1;Name=TMR44003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358812.2;locus_tag=E3V84_09570;product=homoserine dehydrogenase;protein_id=TMR44003.1;transl_table=11 SOQE01000091.1 Genbank gene 64947 65816 . + . ID=gene-E3V84_09575;Name=E3V84_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09575 SOQE01000091.1 Protein Homology CDS 64947 65816 . + 0 ID=cds-TMR44004.1;Parent=gene-E3V84_09575;Dbxref=NCBI_GP:TMR44004.1;Name=TMR44004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358811.1;locus_tag=E3V84_09575;product=homoserine kinase;protein_id=TMR44004.1;transl_table=11 SOQE01000091.1 Genbank gene 66120 67058 . + . ID=gene-E3V84_09580;Name=E3V84_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09580 SOQE01000091.1 Protein Homology CDS 66120 67058 . + 0 ID=cds-TMR44005.1;Parent=gene-E3V84_09580;Dbxref=NCBI_GP:TMR44005.1;Name=TMR44005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358810.1;locus_tag=E3V84_09580;product=peptide-methionine (R)-S-oxide reductase;protein_id=TMR44005.1;transl_table=11 SOQE01000091.1 Genbank gene 67116 68840 . + . ID=gene-E3V84_09585;Name=E3V84_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09585 SOQE01000091.1 Protein Homology CDS 67116 68840 . + 0 ID=cds-TMR44006.1;Parent=gene-E3V84_09585;Dbxref=NCBI_GP:TMR44006.1;Name=TMR44006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358809.1;locus_tag=E3V84_09585;product=ABC transporter ATP-binding protein;protein_id=TMR44006.1;transl_table=11 SOQE01000091.1 Genbank gene 68842 70590 . + . ID=gene-E3V84_09590;Name=E3V84_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09590 SOQE01000091.1 Protein Homology CDS 68842 70590 . + 0 ID=cds-TMR44007.1;Parent=gene-E3V84_09590;Dbxref=NCBI_GP:TMR44007.1;Name=TMR44007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445892.1;locus_tag=E3V84_09590;product=ABC transporter ATP-binding protein;protein_id=TMR44007.1;transl_table=11 SOQE01000091.1 Genbank gene 70982 72241 . + . ID=gene-E3V84_09595;Name=E3V84_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09595 SOQE01000091.1 Protein Homology CDS 70982 72241 . + 0 ID=cds-TMR44008.1;Parent=gene-E3V84_09595;Dbxref=NCBI_GP:TMR44008.1;Name=TMR44008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397889.1;locus_tag=E3V84_09595;product=TRZ/ATZ family protein;protein_id=TMR44008.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 72301 72486 . - . ID=gene-E3V84_09600;Name=E3V84_09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09600;pseudo=true SOQE01000091.1 Protein Homology CDS 72301 72486 . - 0 ID=cds-E3V84_09600;Parent=gene-E3V84_09600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976551.1;locus_tag=E3V84_09600;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000091.1 Genbank gene 72491 72991 . + . ID=gene-E3V84_09605;Name=E3V84_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09605 SOQE01000091.1 Protein Homology CDS 72491 72991 . + 0 ID=cds-TMR44009.1;Parent=gene-E3V84_09605;Dbxref=NCBI_GP:TMR44009.1;Name=TMR44009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=E3V84_09605;product=50S ribosomal protein L10;protein_id=TMR44009.1;transl_table=11 SOQE01000091.1 Genbank gene 73064 73432 . + . ID=gene-E3V84_09610;Name=E3V84_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09610 SOQE01000091.1 Protein Homology CDS 73064 73432 . + 0 ID=cds-TMR44010.1;Parent=gene-E3V84_09610;Dbxref=NCBI_GP:TMR44010.1;Name=TMR44010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=E3V84_09610;product=50S ribosomal protein L7/L12;protein_id=TMR44010.1;transl_table=11 SOQE01000091.1 Genbank gene 73470 73586 . + . ID=gene-E3V84_09615;Name=E3V84_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09615 SOQE01000091.1 Protein Homology CDS 73470 73586 . + 0 ID=cds-TMR44040.1;Parent=gene-E3V84_09615;Dbxref=NCBI_GP:TMR44040.1;Name=TMR44040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822400.1;locus_tag=E3V84_09615;product=DNA alkylation repair protein;protein_id=TMR44040.1;transl_table=11 SOQE01000091.1 Genbank gene 73822 75168 . - . ID=gene-E3V84_09620;Name=E3V84_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09620 SOQE01000091.1 Protein Homology CDS 73822 75168 . - 0 ID=cds-TMR44011.1;Parent=gene-E3V84_09620;Dbxref=NCBI_GP:TMR44011.1;Name=TMR44011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358774.1;locus_tag=E3V84_09620;product=NADP-specific glutamate dehydrogenase;protein_id=TMR44011.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 75459 75552 . + . ID=gene-E3V84_09625;Name=E3V84_09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09625;pseudo=true SOQE01000091.1 Protein Homology CDS 75459 75552 . + 0 ID=cds-E3V84_09625;Parent=gene-E3V84_09625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850150.1;locus_tag=E3V84_09625;product=nuclease;pseudo=true;transl_table=11 SOQE01000091.1 Genbank pseudogene 75609 76143 . + . ID=gene-E3V84_09630;Name=E3V84_09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09630;pseudo=true SOQE01000091.1 Protein Homology CDS 75609 76143 . + 0 ID=cds-E3V84_09630;Parent=gene-E3V84_09630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V84_09630;product=transposase;pseudo=true;transl_table=11 SOQE01000091.1 Genbank gene 76183 76509 . - . ID=gene-E3V84_09635;Name=E3V84_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09635 SOQE01000091.1 Protein Homology CDS 76183 76509 . - 0 ID=cds-TMR44012.1;Parent=gene-E3V84_09635;Dbxref=NCBI_GP:TMR44012.1;Name=TMR44012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V84_09635;product=choline-binding protein;protein_id=TMR44012.1;transl_table=11 SOQE01000091.1 Genbank gene 76520 76948 . - . ID=gene-E3V84_09640;Name=E3V84_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09640 SOQE01000091.1 Protein Homology CDS 76520 76948 . - 0 ID=cds-TMR44013.1;Parent=gene-E3V84_09640;Dbxref=NCBI_GP:TMR44013.1;Name=TMR44013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284893.1;locus_tag=E3V84_09640;product=choline-binding protein C;protein_id=TMR44013.1;transl_table=11 SOQE01000091.1 Genbank gene 76917 77726 . - . ID=gene-E3V84_09645;Name=E3V84_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09645 SOQE01000091.1 Protein Homology CDS 76917 77726 . - 0 ID=cds-TMR44014.1;Parent=gene-E3V84_09645;Dbxref=NCBI_GP:TMR44014.1;Name=TMR44014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358418.1;locus_tag=E3V84_09645;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR44014.1;transl_table=11 SOQE01000091.1 Genbank gene 77945 78616 . + . ID=gene-E3V84_09650;Name=E3V84_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09650 SOQE01000091.1 Protein Homology CDS 77945 78616 . + 0 ID=cds-TMR44015.1;Parent=gene-E3V84_09650;Dbxref=NCBI_GP:TMR44015.1;Name=TMR44015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358420.1;locus_tag=E3V84_09650;product=CPBP family intramembrane metalloprotease;protein_id=TMR44015.1;transl_table=11 SOQE01000091.1 Genbank gene 78709 78873 . - . ID=gene-E3V84_09655;Name=E3V84_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09655 SOQE01000091.1 Protein Homology CDS 78709 78873 . - 0 ID=cds-TMR44016.1;Parent=gene-E3V84_09655;Dbxref=NCBI_GP:TMR44016.1;Name=TMR44016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821532.1;locus_tag=E3V84_09655;product=AraC family transcriptional regulator;protein_id=TMR44016.1;transl_table=11 SOQE01000091.1 Genbank gene 78866 79774 . + . ID=gene-E3V84_09660;Name=E3V84_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09660 SOQE01000091.1 Protein Homology CDS 78866 79774 . + 0 ID=cds-TMR44017.1;Parent=gene-E3V84_09660;Dbxref=NCBI_GP:TMR44017.1;Name=TMR44017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446042.1;locus_tag=E3V84_09660;product=LysR family transcriptional regulator;protein_id=TMR44017.1;transl_table=11 SOQE01000091.1 Genbank gene 79771 80232 . + . ID=gene-E3V84_09665;Name=E3V84_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09665 SOQE01000091.1 Protein Homology CDS 79771 80232 . + 0 ID=cds-TMR44018.1;Parent=gene-E3V84_09665;Dbxref=NCBI_GP:TMR44018.1;Name=TMR44018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358423.1;locus_tag=E3V84_09665;product=signal peptidase II;protein_id=TMR44018.1;transl_table=11 SOQE01000091.1 Genbank gene 80222 81109 . + . ID=gene-E3V84_09670;Name=E3V84_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09670 SOQE01000091.1 Protein Homology CDS 80222 81109 . + 0 ID=cds-TMR44019.1;Parent=gene-E3V84_09670;Dbxref=NCBI_GP:TMR44019.1;Name=TMR44019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446044.1;locus_tag=E3V84_09670;product=RluA family pseudouridine synthase;protein_id=TMR44019.1;transl_table=11 SOQE01000091.1 Genbank gene 81112 82995 . + . ID=gene-E3V84_09675;Name=E3V84_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09675 SOQE01000091.1 Protein Homology CDS 81112 82995 . + 0 ID=cds-TMR44020.1;Parent=gene-E3V84_09675;Dbxref=NCBI_GP:TMR44020.1;Name=TMR44020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358425.1;locus_tag=E3V84_09675;product=MBL fold metallo-hydrolase;protein_id=TMR44020.1;transl_table=11 SOQE01000091.1 Genbank gene 83075 84205 . + . ID=gene-E3V84_09680;Name=E3V84_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09680 SOQE01000091.1 Protein Homology CDS 83075 84205 . + 0 ID=cds-TMR44021.1;Parent=gene-E3V84_09680;Dbxref=NCBI_GP:TMR44021.1;Name=TMR44021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446047.1;locus_tag=E3V84_09680;product=glutamate 5-kinase;protein_id=TMR44021.1;transl_table=11 SOQE01000091.1 Genbank gene 84215 85477 . + . ID=gene-E3V84_09685;Name=E3V84_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09685 SOQE01000091.1 Protein Homology CDS 84215 85477 . + 0 ID=cds-TMR44022.1;Parent=gene-E3V84_09685;Dbxref=NCBI_GP:TMR44022.1;Name=TMR44022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358427.1;locus_tag=E3V84_09685;product=glutamate-5-semialdehyde dehydrogenase;protein_id=TMR44022.1;transl_table=11 SOQE01000091.1 Genbank gene 85481 86278 . + . ID=gene-E3V84_09690;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=E3V84_09690 SOQE01000091.1 Protein Homology CDS 85481 86278 . + 0 ID=cds-TMR44023.1;Parent=gene-E3V84_09690;Dbxref=NCBI_GP:TMR44023.1;Name=TMR44023.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358428.1;locus_tag=E3V84_09690;product=pyrroline-5-carboxylate reductase;protein_id=TMR44023.1;transl_table=11 SOQE01000091.1 Genbank gene 86507 87145 . + . ID=gene-E3V84_09695;Name=E3V84_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09695 SOQE01000091.1 Protein Homology CDS 86507 87145 . + 0 ID=cds-TMR44024.1;Parent=gene-E3V84_09695;Dbxref=NCBI_GP:TMR44024.1;Name=TMR44024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358429.1;locus_tag=E3V84_09695;product=dTMP kinase;protein_id=TMR44024.1;transl_table=11 SOQE01000091.1 Genbank gene 87142 88032 . + . ID=gene-E3V84_09700;Name=E3V84_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09700 SOQE01000091.1 Protein Homology CDS 87142 88032 . + 0 ID=cds-TMR44025.1;Parent=gene-E3V84_09700;Dbxref=NCBI_GP:TMR44025.1;Name=TMR44025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358430.1;locus_tag=E3V84_09700;product=DNA polymerase III subunit delta';protein_id=TMR44025.1;transl_table=11 SOQE01000091.1 Genbank gene 88072 88389 . + . ID=gene-E3V84_09705;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=E3V84_09705 SOQE01000091.1 Protein Homology CDS 88072 88389 . + 0 ID=cds-TMR44026.1;Parent=gene-E3V84_09705;Dbxref=NCBI_GP:TMR44026.1;Name=TMR44026.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446052.1;locus_tag=E3V84_09705;product=DNA replication initiation control protein YabA;protein_id=TMR44026.1;transl_table=11 SOQE01000091.1 Genbank gene 88392 89270 . + . ID=gene-E3V84_09710;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=E3V84_09710 SOQE01000091.1 Protein Homology CDS 88392 89270 . + 0 ID=cds-TMR44027.1;Parent=gene-E3V84_09710;Dbxref=NCBI_GP:TMR44027.1;Name=TMR44027.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166890.1;locus_tag=E3V84_09710;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=TMR44027.1;transl_table=11 SOQE01000091.1 Genbank gene 89843 91177 . + . ID=gene-E3V84_09715;Name=E3V84_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09715 SOQE01000091.1 Protein Homology CDS 89843 91177 . + 0 ID=cds-TMR44028.1;Parent=gene-E3V84_09715;Dbxref=NCBI_GP:TMR44028.1;Name=TMR44028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358438.1;locus_tag=E3V84_09715;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=TMR44028.1;transl_table=11 SOQE01000091.1 Genbank gene 91261 91998 . + . ID=gene-E3V84_09720;Name=E3V84_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09720 SOQE01000091.1 Protein Homology CDS 91261 91998 . + 0 ID=cds-TMR44029.1;Parent=gene-E3V84_09720;Dbxref=NCBI_GP:TMR44029.1;Name=TMR44029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446061.1;locus_tag=E3V84_09720;product=UMP kinase;protein_id=TMR44029.1;transl_table=11 SOQE01000091.1 Genbank gene 92007 92564 . + . ID=gene-E3V84_09725;Name=E3V84_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09725 SOQE01000091.1 Protein Homology CDS 92007 92564 . + 0 ID=cds-TMR44030.1;Parent=gene-E3V84_09725;Dbxref=NCBI_GP:TMR44030.1;Name=TMR44030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=E3V84_09725;product=ribosome recycling factor;protein_id=TMR44030.1;transl_table=11 SOQE01000091.1 Genbank gene 92624 93478 . + . ID=gene-E3V84_09730;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=E3V84_09730 SOQE01000091.1 Protein Homology CDS 92624 93478 . + 0 ID=cds-TMR44031.1;Parent=gene-E3V84_09730;Dbxref=NCBI_GP:TMR44031.1;Name=TMR44031.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446063.1;locus_tag=E3V84_09730;product=RNA-binding virulence regulatory protein CvfB;protein_id=TMR44031.1;transl_table=11 SOQE01000091.1 Genbank gene 93487 93702 . + . ID=gene-E3V84_09735;Name=E3V84_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09735 SOQE01000091.1 Protein Homology CDS 93487 93702 . + 0 ID=cds-TMR44032.1;Parent=gene-E3V84_09735;Dbxref=NCBI_GP:TMR44032.1;Name=TMR44032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446064.1;locus_tag=E3V84_09735;product=YozE family protein;protein_id=TMR44032.1;transl_table=11 SOQE01000091.1 Genbank gene 93787 94791 . + . ID=gene-E3V84_09740;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=E3V84_09740 SOQE01000091.1 Protein Homology CDS 93787 94791 . + 0 ID=cds-TMR44033.1;Parent=gene-E3V84_09740;Dbxref=NCBI_GP:TMR44033.1;Name=TMR44033.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446065.1;locus_tag=E3V84_09740;product=phosphate starvation-inducible protein PhoH;protein_id=TMR44033.1;transl_table=11 SOQE01000091.1 Genbank gene 95004 95573 . + . ID=gene-E3V84_09745;Name=E3V84_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09745 SOQE01000091.1 Protein Homology CDS 95004 95573 . + 0 ID=cds-TMR44034.1;Parent=gene-E3V84_09745;Dbxref=NCBI_GP:TMR44034.1;Name=TMR44034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358449.1;locus_tag=E3V84_09745;product=N-acetyltransferase;protein_id=TMR44034.1;transl_table=11 SOQE01000091.1 Genbank gene 95641 96291 . + . ID=gene-E3V84_09750;Name=E3V84_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09750 SOQE01000091.1 Protein Homology CDS 95641 96291 . + 0 ID=cds-TMR44035.1;Parent=gene-E3V84_09750;Dbxref=NCBI_GP:TMR44035.1;Name=TMR44035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358450.1;locus_tag=E3V84_09750;product=ComEA family DNA-binding protein;protein_id=TMR44035.1;transl_table=11 SOQE01000091.1 Genbank gene 96275 98509 . + . ID=gene-E3V84_09755;Name=E3V84_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09755 SOQE01000091.1 Protein Homology CDS 96275 98509 . + 0 ID=cds-TMR44036.1;Parent=gene-E3V84_09755;Dbxref=NCBI_GP:TMR44036.1;Name=TMR44036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446068.1;locus_tag=E3V84_09755;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=TMR44036.1;transl_table=11 SOQE01000091.1 Genbank pseudogene 98567 99145 . + . ID=gene-E3V84_09760;Name=E3V84_09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09760;pseudo=true SOQE01000091.1 Protein Homology CDS 98567 99145 . + 0 ID=cds-E3V84_09760;Parent=gene-E3V84_09760;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V84_09760;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQE01000092.1 1 9980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000092.1 Genbank region 1 9980 . + . ID=SOQE01000092.1:1..9980;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000092.1 Genbank gene 142 489 . + . ID=gene-E3V84_09765;Name=E3V84_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09765 SOQE01000092.1 Protein Homology CDS 142 489 . + 0 ID=cds-TMR43939.1;Parent=gene-E3V84_09765;Dbxref=NCBI_GP:TMR43939.1;Name=TMR43939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358194.1;locus_tag=E3V84_09765;product=lactococcin 972 family bacteriocin;protein_id=TMR43939.1;transl_table=11 SOQE01000092.1 Genbank gene 561 2582 . + . ID=gene-E3V84_09770;Name=E3V84_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09770 SOQE01000092.1 Protein Homology CDS 561 2582 . + 0 ID=cds-TMR43933.1;Parent=gene-E3V84_09770;Dbxref=NCBI_GP:TMR43933.1;Name=TMR43933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446553.1;locus_tag=E3V84_09770;product=bacteriocin-associated integral membrane family protein;protein_id=TMR43933.1;transl_table=11 SOQE01000092.1 Genbank gene 2584 3225 . + . ID=gene-E3V84_09775;Name=E3V84_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09775 SOQE01000092.1 Protein Homology CDS 2584 3225 . + 0 ID=cds-TMR43934.1;Parent=gene-E3V84_09775;Dbxref=NCBI_GP:TMR43934.1;Name=TMR43934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358196.1;locus_tag=E3V84_09775;product=ABC transporter ATP-binding protein;protein_id=TMR43934.1;transl_table=11 SOQE01000092.1 Genbank gene 3434 4786 . + . ID=gene-E3V84_09780;Name=E3V84_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09780 SOQE01000092.1 Protein Homology CDS 3434 4786 . + 0 ID=cds-TMR43935.1;Parent=gene-E3V84_09780;Dbxref=NCBI_GP:TMR43935.1;Name=TMR43935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446551.1;locus_tag=E3V84_09780;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TMR43935.1;transl_table=11 SOQE01000092.1 Genbank gene 4788 5846 . + . ID=gene-E3V84_09785;Name=E3V84_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09785 SOQE01000092.1 Protein Homology CDS 4788 5846 . + 0 ID=cds-TMR43936.1;Parent=gene-E3V84_09785;Dbxref=NCBI_GP:TMR43936.1;Name=TMR43936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358198.1;locus_tag=E3V84_09785;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=TMR43936.1;transl_table=11 SOQE01000092.1 Genbank gene 5856 7076 . + . ID=gene-E3V84_09790;Name=E3V84_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09790 SOQE01000092.1 Protein Homology CDS 5856 7076 . + 0 ID=cds-TMR43937.1;Parent=gene-E3V84_09790;Dbxref=NCBI_GP:TMR43937.1;Name=TMR43937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446549.1;locus_tag=E3V84_09790;product=cell division protein FtsQ/DivIB;protein_id=TMR43937.1;transl_table=11 SOQE01000092.1 Genbank gene 7713 8561 . + . ID=gene-E3V84_09795;Name=E3V84_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09795 SOQE01000092.1 Protein Homology CDS 7713 8561 . + 0 ID=cds-TMR43938.1;Parent=gene-E3V84_09795;Dbxref=NCBI_GP:TMR43938.1;Name=TMR43938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358201.1;locus_tag=E3V84_09795;product=peptidase M50 family protein;protein_id=TMR43938.1;transl_table=11 SOQE01000092.1 Genbank pseudogene 8545 8733 . + . ID=gene-E3V84_09800;Name=E3V84_09800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09800;pseudo=true SOQE01000092.1 Protein Homology CDS 8545 8733 . + 0 ID=cds-E3V84_09800;Parent=gene-E3V84_09800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828969.1;locus_tag=E3V84_09800;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11 SOQE01000092.1 Genbank pseudogene 8770 9880 . + . ID=gene-E3V84_09805;Name=E3V84_09805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09805;pseudo=true SOQE01000092.1 Protein Homology CDS 8770 9880 . + 0 ID=cds-E3V84_09805;Parent=gene-E3V84_09805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817174.1;locus_tag=E3V84_09805;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11 ##sequence-region SOQE01000093.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000093.1 Genbank region 1 504 . + . ID=SOQE01000093.1:1..504;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000093.1 Genbank gene 1 504 . + . ID=gene-E3V84_09810;Name=E3V84_09810;end_range=504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09810;partial=true;start_range=.,1 SOQE01000093.1 Protein Homology CDS 1 504 . + 1 ID=cds-TMR43910.1;Parent=gene-E3V84_09810;Dbxref=NCBI_GP:TMR43910.1;Name=TMR43910.1;end_range=504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V84_09810;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR43910.1;start_range=.,1;transl_table=11 ##sequence-region SOQE01000094.1 1 19073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000094.1 Genbank region 1 19073 . + . ID=SOQE01000094.1:1..19073;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000094.1 Genbank gene 11 126 . + . ID=gene-E3V84_09815;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V84_09815 SOQE01000094.1 cmsearch rRNA 11 126 . + . ID=rna-E3V84_09815;Parent=gene-E3V84_09815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_09815;product=5S ribosomal RNA SOQE01000094.1 cmsearch exon 11 126 . + . ID=exon-E3V84_09815-1;Parent=rna-E3V84_09815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V84_09815;product=5S ribosomal RNA SOQE01000094.1 Genbank gene 131 203 . + . ID=gene-E3V84_09820;Name=E3V84_09820;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09820 SOQE01000094.1 tRNAscan-SE tRNA 131 203 . + . ID=rna-E3V84_09820;Parent=gene-E3V84_09820;anticodon=(pos:164..166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09820;product=tRNA-Val SOQE01000094.1 tRNAscan-SE exon 131 203 . + . ID=exon-E3V84_09820-1;Parent=rna-E3V84_09820;anticodon=(pos:164..166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09820;product=tRNA-Val SOQE01000094.1 Genbank gene 206 278 . + . ID=gene-E3V84_09825;Name=E3V84_09825;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09825 SOQE01000094.1 tRNAscan-SE tRNA 206 278 . + . ID=rna-E3V84_09825;Parent=gene-E3V84_09825;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09825;product=tRNA-Asp SOQE01000094.1 tRNAscan-SE exon 206 278 . + . ID=exon-E3V84_09825-1;Parent=rna-E3V84_09825;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09825;product=tRNA-Asp SOQE01000094.1 Genbank gene 303 375 . + . ID=gene-E3V84_09830;Name=E3V84_09830;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09830 SOQE01000094.1 tRNAscan-SE tRNA 303 375 . + . ID=rna-E3V84_09830;Parent=gene-E3V84_09830;anticodon=(pos:336..338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09830;product=tRNA-Lys SOQE01000094.1 tRNAscan-SE exon 303 375 . + . ID=exon-E3V84_09830-1;Parent=rna-E3V84_09830;anticodon=(pos:336..338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09830;product=tRNA-Lys SOQE01000094.1 Genbank gene 381 462 . + . ID=gene-E3V84_09835;Name=E3V84_09835;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09835 SOQE01000094.1 tRNAscan-SE tRNA 381 462 . + . ID=rna-E3V84_09835;Parent=gene-E3V84_09835;anticodon=(pos:415..417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09835;product=tRNA-Leu SOQE01000094.1 tRNAscan-SE exon 381 462 . + . ID=exon-E3V84_09835-1;Parent=rna-E3V84_09835;anticodon=(pos:415..417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09835;product=tRNA-Leu SOQE01000094.1 Genbank gene 481 553 . + . ID=gene-E3V84_09840;Name=E3V84_09840;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09840 SOQE01000094.1 tRNAscan-SE tRNA 481 553 . + . ID=rna-E3V84_09840;Parent=gene-E3V84_09840;anticodon=(pos:514..516);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09840;product=tRNA-Thr SOQE01000094.1 tRNAscan-SE exon 481 553 . + . ID=exon-E3V84_09840-1;Parent=rna-E3V84_09840;anticodon=(pos:514..516);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09840;product=tRNA-Thr SOQE01000094.1 Genbank gene 576 647 . + . ID=gene-E3V84_09845;Name=E3V84_09845;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09845 SOQE01000094.1 tRNAscan-SE tRNA 576 647 . + . ID=rna-E3V84_09845;Parent=gene-E3V84_09845;anticodon=(pos:608..610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09845;product=tRNA-Gly SOQE01000094.1 tRNAscan-SE exon 576 647 . + . ID=exon-E3V84_09845-1;Parent=rna-E3V84_09845;anticodon=(pos:608..610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09845;product=tRNA-Gly SOQE01000094.1 Genbank gene 655 740 . + . ID=gene-E3V84_09850;Name=E3V84_09850;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09850 SOQE01000094.1 tRNAscan-SE tRNA 655 740 . + . ID=rna-E3V84_09850;Parent=gene-E3V84_09850;anticodon=(pos:689..691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09850;product=tRNA-Leu SOQE01000094.1 tRNAscan-SE exon 655 740 . + . ID=exon-E3V84_09850-1;Parent=rna-E3V84_09850;anticodon=(pos:689..691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09850;product=tRNA-Leu SOQE01000094.1 Genbank gene 752 825 . + . ID=gene-E3V84_09855;Name=E3V84_09855;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09855 SOQE01000094.1 tRNAscan-SE tRNA 752 825 . + . ID=rna-E3V84_09855;Parent=gene-E3V84_09855;anticodon=(pos:786..788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09855;product=tRNA-Arg SOQE01000094.1 tRNAscan-SE exon 752 825 . + . ID=exon-E3V84_09855-1;Parent=rna-E3V84_09855;anticodon=(pos:786..788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09855;product=tRNA-Arg SOQE01000094.1 Genbank gene 841 914 . + . ID=gene-E3V84_09860;Name=E3V84_09860;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_09860 SOQE01000094.1 tRNAscan-SE tRNA 841 914 . + . ID=rna-E3V84_09860;Parent=gene-E3V84_09860;anticodon=(pos:875..877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09860;product=tRNA-Pro SOQE01000094.1 tRNAscan-SE exon 841 914 . + . ID=exon-E3V84_09860-1;Parent=rna-E3V84_09860;anticodon=(pos:875..877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_09860;product=tRNA-Pro SOQE01000094.1 Genbank gene 1519 1725 . + . ID=gene-E3V84_09865;Name=E3V84_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09865 SOQE01000094.1 Protein Homology CDS 1519 1725 . + 0 ID=cds-TMR43884.1;Parent=gene-E3V84_09865;Dbxref=NCBI_GP:TMR43884.1;Name=TMR43884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359410.1;locus_tag=E3V84_09865;product=hypothetical protein;protein_id=TMR43884.1;transl_table=11 SOQE01000094.1 Genbank gene 1722 1886 . + . ID=gene-E3V84_09870;Name=E3V84_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09870 SOQE01000094.1 Protein Homology CDS 1722 1886 . + 0 ID=cds-TMR43885.1;Parent=gene-E3V84_09870;Dbxref=NCBI_GP:TMR43885.1;Name=TMR43885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445395.1;locus_tag=E3V84_09870;product=hypothetical protein;protein_id=TMR43885.1;transl_table=11 SOQE01000094.1 Genbank gene 1903 2787 . + . ID=gene-E3V84_09875;Name=E3V84_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09875 SOQE01000094.1 Protein Homology CDS 1903 2787 . + 0 ID=cds-TMR43886.1;Parent=gene-E3V84_09875;Dbxref=NCBI_GP:TMR43886.1;Name=TMR43886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445396.1;locus_tag=E3V84_09875;product=ABC transporter ATP-binding protein;protein_id=TMR43886.1;transl_table=11 SOQE01000094.1 Genbank gene 2789 3526 . + . ID=gene-E3V84_09880;Name=E3V84_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09880 SOQE01000094.1 Protein Homology CDS 2789 3526 . + 0 ID=cds-TMR43887.1;Parent=gene-E3V84_09880;Dbxref=NCBI_GP:TMR43887.1;Name=TMR43887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445397.1;locus_tag=E3V84_09880;product=ABC transporter permease;protein_id=TMR43887.1;transl_table=11 SOQE01000094.1 Genbank gene 3526 4623 . + . ID=gene-E3V84_09885;Name=E3V84_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09885 SOQE01000094.1 Protein Homology CDS 3526 4623 . + 0 ID=cds-TMR43888.1;Parent=gene-E3V84_09885;Dbxref=NCBI_GP:TMR43888.1;Name=TMR43888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001848091.1;locus_tag=E3V84_09885;product=sensor histidine kinase;protein_id=TMR43888.1;transl_table=11 SOQE01000094.1 Genbank gene 4624 5223 . + . ID=gene-E3V84_09890;Name=E3V84_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09890 SOQE01000094.1 Protein Homology CDS 4624 5223 . + 0 ID=cds-TMR43889.1;Parent=gene-E3V84_09890;Dbxref=NCBI_GP:TMR43889.1;Name=TMR43889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359406.1;locus_tag=E3V84_09890;product=response regulator transcription factor;protein_id=TMR43889.1;transl_table=11 SOQE01000094.1 Genbank gene 5541 6551 . + . ID=gene-E3V84_09895;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=E3V84_09895 SOQE01000094.1 Protein Homology CDS 5541 6551 . + 0 ID=cds-TMR43890.1;Parent=gene-E3V84_09895;Dbxref=NCBI_GP:TMR43890.1;Name=TMR43890.1;gbkey=CDS;gene=ccpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445424.1;locus_tag=E3V84_09895;product=catabolite control protein A;protein_id=TMR43890.1;transl_table=11 SOQE01000094.1 Genbank gene 6615 7322 . + . ID=gene-E3V84_09900;Name=E3V84_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09900 SOQE01000094.1 GeneMarkS-2+ CDS 6615 7322 . + 0 ID=cds-TMR43891.1;Parent=gene-E3V84_09900;Dbxref=NCBI_GP:TMR43891.1;Name=TMR43891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V84_09900;product=hypothetical protein;protein_id=TMR43891.1;transl_table=11 SOQE01000094.1 Genbank gene 7351 8313 . - . ID=gene-E3V84_09905;Name=E3V84_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09905 SOQE01000094.1 Protein Homology CDS 7351 8313 . - 0 ID=cds-TMR43892.1;Parent=gene-E3V84_09905;Dbxref=NCBI_GP:TMR43892.1;Name=TMR43892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359404.1;locus_tag=E3V84_09905;product=asparaginase;protein_id=TMR43892.1;transl_table=11 SOQE01000094.1 Genbank gene 8379 9770 . + . ID=gene-E3V84_09910;Name=E3V84_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09910 SOQE01000094.1 Protein Homology CDS 8379 9770 . + 0 ID=cds-TMR43893.1;Parent=gene-E3V84_09910;Dbxref=NCBI_GP:TMR43893.1;Name=TMR43893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445426.1;locus_tag=E3V84_09910;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR43893.1;transl_table=11 SOQE01000094.1 Genbank gene 9767 9889 . + . ID=gene-E3V84_09915;Name=E3V84_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09915 SOQE01000094.1 Protein Homology CDS 9767 9889 . + 0 ID=cds-TMR43894.1;Parent=gene-E3V84_09915;Dbxref=NCBI_GP:TMR43894.1;Name=TMR43894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V84_09915;product=chlorohydrolase;protein_id=TMR43894.1;transl_table=11 SOQE01000094.1 Genbank gene 9962 10414 . - . ID=gene-E3V84_09920;Name=E3V84_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09920 SOQE01000094.1 Protein Homology CDS 9962 10414 . - 0 ID=cds-TMR43895.1;Parent=gene-E3V84_09920;Dbxref=NCBI_GP:TMR43895.1;Name=TMR43895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445427.1;locus_tag=E3V84_09920;product=universal stress protein;protein_id=TMR43895.1;transl_table=11 SOQE01000094.1 Genbank gene 10579 10878 . + . ID=gene-E3V84_09925;Name=E3V84_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09925 SOQE01000094.1 Protein Homology CDS 10579 10878 . + 0 ID=cds-TMR43902.1;Parent=gene-E3V84_09925;Dbxref=NCBI_GP:TMR43902.1;Name=TMR43902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445428.1;locus_tag=E3V84_09925;product=hypothetical protein;protein_id=TMR43902.1;transl_table=11 SOQE01000094.1 Genbank gene 11035 12249 . + . ID=gene-E3V84_09930;Name=E3V84_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09930 SOQE01000094.1 Protein Homology CDS 11035 12249 . + 0 ID=cds-TMR43896.1;Parent=gene-E3V84_09930;Dbxref=NCBI_GP:TMR43896.1;Name=TMR43896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445429.1;locus_tag=E3V84_09930;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR43896.1;transl_table=11 SOQE01000094.1 Genbank gene 12394 12528 . + . ID=gene-E3V84_09935;Name=E3V84_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09935 SOQE01000094.1 Protein Homology CDS 12394 12528 . + 0 ID=cds-TMR43897.1;Parent=gene-E3V84_09935;Dbxref=NCBI_GP:TMR43897.1;Name=TMR43897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=E3V84_09935;product=50S ribosomal protein L34;protein_id=TMR43897.1;transl_table=11 SOQE01000094.1 Genbank gene 13141 14568 . + . ID=gene-E3V84_09940;Name=E3V84_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09940 SOQE01000094.1 Protein Homology CDS 13141 14568 . + 0 ID=cds-TMR43898.1;Parent=gene-E3V84_09940;Dbxref=NCBI_GP:TMR43898.1;Name=TMR43898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=E3V84_09940;product=YSIRK-type signal peptide-containing protein;protein_id=TMR43898.1;transl_table=11 SOQE01000094.1 Genbank gene 14544 16397 . + . ID=gene-E3V84_09945;Name=E3V84_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09945 SOQE01000094.1 Protein Homology CDS 14544 16397 . + 0 ID=cds-TMR43899.1;Parent=gene-E3V84_09945;Dbxref=NCBI_GP:TMR43899.1;Name=TMR43899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08428.8;locus_tag=E3V84_09945;product=hypothetical protein;protein_id=TMR43899.1;transl_table=11 SOQE01000094.1 Genbank gene 16372 18069 . + . ID=gene-E3V84_09950;Name=E3V84_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09950 SOQE01000094.1 Protein Homology CDS 16372 18069 . + 0 ID=cds-TMR43900.1;Parent=gene-E3V84_09950;Dbxref=NCBI_GP:TMR43900.1;Name=TMR43900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08428.8;locus_tag=E3V84_09950;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR43900.1;transl_table=11 SOQE01000094.1 Genbank gene 18307 19073 . - . ID=gene-E3V84_09955;Name=E3V84_09955;end_range=19073,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09955;partial=true SOQE01000094.1 Protein Homology CDS 18307 19073 . - 2 ID=cds-TMR43901.1;Parent=gene-E3V84_09955;Dbxref=NCBI_GP:TMR43901.1;Name=TMR43901.1;end_range=19073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V84_09955;partial=true;product=IS66 family transposase;protein_id=TMR43901.1;transl_table=11 ##sequence-region SOQE01000095.1 1 4498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000095.1 Genbank region 1 4498 . + . ID=SOQE01000095.1:1..4498;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000095.1 Genbank gene 249 419 . + . ID=gene-E3V84_09960;Name=E3V84_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09960 SOQE01000095.1 Protein Homology CDS 249 419 . + 0 ID=cds-TMR43855.1;Parent=gene-E3V84_09960;Dbxref=NCBI_GP:TMR43855.1;Name=TMR43855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359356.1;locus_tag=E3V84_09960;product=hypothetical protein;protein_id=TMR43855.1;transl_table=11 SOQE01000095.1 Genbank gene 734 1030 . + . ID=gene-E3V84_09965;Name=E3V84_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09965 SOQE01000095.1 Protein Homology CDS 734 1030 . + 0 ID=cds-TMR43856.1;Parent=gene-E3V84_09965;Dbxref=NCBI_GP:TMR43856.1;Name=TMR43856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911560.1;locus_tag=E3V84_09965;product=lactococcin 972 family bacteriocin;protein_id=TMR43856.1;transl_table=11 SOQE01000095.1 Genbank gene 1133 3148 . + . ID=gene-E3V84_09970;Name=E3V84_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09970 SOQE01000095.1 Protein Homology CDS 1133 3148 . + 0 ID=cds-TMR43857.1;Parent=gene-E3V84_09970;Dbxref=NCBI_GP:TMR43857.1;Name=TMR43857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677978.1;locus_tag=E3V84_09970;product=bacteriocin-associated integral membrane family protein;protein_id=TMR43857.1;transl_table=11 SOQE01000095.1 Genbank gene 3150 3782 . + . ID=gene-E3V84_09975;Name=E3V84_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09975 SOQE01000095.1 Protein Homology CDS 3150 3782 . + 0 ID=cds-TMR43858.1;Parent=gene-E3V84_09975;Dbxref=NCBI_GP:TMR43858.1;Name=TMR43858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359365.1;locus_tag=E3V84_09975;product=ABC transporter ATP-binding protein;protein_id=TMR43858.1;transl_table=11 SOQE01000095.1 Genbank gene 3923 4201 . + . ID=gene-E3V84_09980;Name=E3V84_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_09980 SOQE01000095.1 Protein Homology CDS 3923 4201 . + 0 ID=cds-TMR43859.1;Parent=gene-E3V84_09980;Dbxref=NCBI_GP:TMR43859.1;Name=TMR43859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843943.1;locus_tag=E3V84_09980;product=competence protein ComA;protein_id=TMR43859.1;transl_table=11 SOQE01000095.1 Genbank pseudogene 4269 4498 . - . ID=gene-E3V84_09985;Name=E3V84_09985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09985;pseudo=true SOQE01000095.1 Protein Homology CDS 4269 4498 . - 2 ID=cds-E3V84_09985;Parent=gene-E3V84_09985;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093621.1;locus_tag=E3V84_09985;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region SOQE01000096.1 1 5029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000096.1 Genbank region 1 5029 . + . ID=SOQE01000096.1:1..5029;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000096.1 Genbank gene 272 1468 . + . ID=gene-E3V84_09990;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=E3V84_09990 SOQE01000096.1 Protein Homology CDS 272 1468 . + 0 ID=cds-TMR43847.1;Parent=gene-E3V84_09990;Dbxref=NCBI_GP:TMR43847.1;Name=TMR43847.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=E3V84_09990;product=elongation factor Tu;protein_id=TMR43847.1;transl_table=11 SOQE01000096.1 Genbank pseudogene 1565 1639 . + . ID=gene-E3V84_09995;Name=E3V84_09995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_09995;pseudo=true SOQE01000096.1 Protein Homology CDS 1565 1639 . + 0 ID=cds-E3V84_09995;Parent=gene-E3V84_09995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V84_09995;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000096.1 Genbank gene 2091 2225 . + . ID=gene-E3V84_10000;Name=E3V84_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10000 SOQE01000096.1 Protein Homology CDS 2091 2225 . + 0 ID=cds-TMR43851.1;Parent=gene-E3V84_10000;Dbxref=NCBI_GP:TMR43851.1;Name=TMR43851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238277.1;locus_tag=E3V84_10000;product=lysyl-tRNA synthetase;protein_id=TMR43851.1;transl_table=11 SOQE01000096.1 Genbank gene 2218 3300 . - . ID=gene-E3V84_10005;Name=E3V84_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10005 SOQE01000096.1 Protein Homology CDS 2218 3300 . - 0 ID=cds-TMR43848.1;Parent=gene-E3V84_10005;Dbxref=NCBI_GP:TMR43848.1;Name=TMR43848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358929.1;locus_tag=E3V84_10005;product=DEAD/DEAH box helicase;protein_id=TMR43848.1;transl_table=11 SOQE01000096.1 Genbank gene 3297 4274 . - . ID=gene-E3V84_10010;Name=E3V84_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10010 SOQE01000096.1 Protein Homology CDS 3297 4274 . - 0 ID=cds-TMR43849.1;Parent=gene-E3V84_10010;Dbxref=NCBI_GP:TMR43849.1;Name=TMR43849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446036.1;locus_tag=E3V84_10010;product=Gfo/Idh/MocA family oxidoreductase;protein_id=TMR43849.1;transl_table=11 SOQE01000096.1 Genbank gene 4471 5028 . + . ID=gene-E3V84_10015;Name=E3V84_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10015 SOQE01000096.1 Protein Homology CDS 4471 5028 . + 0 ID=cds-TMR43850.1;Parent=gene-E3V84_10015;Dbxref=NCBI_GP:TMR43850.1;Name=TMR43850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445202.1;locus_tag=E3V84_10015;product=hypothetical protein;protein_id=TMR43850.1;transl_table=11 ##sequence-region SOQE01000097.1 1 26727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000097.1 Genbank region 1 26727 . + . ID=SOQE01000097.1:1..26727;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000097.1 Genbank gene 287 357 . + . ID=gene-E3V84_10020;Name=E3V84_10020;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V84_10020 SOQE01000097.1 tRNAscan-SE tRNA 287 357 . + . ID=rna-E3V84_10020;Parent=gene-E3V84_10020;anticodon=(pos:319..321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_10020;product=tRNA-Cys SOQE01000097.1 tRNAscan-SE exon 287 357 . + . ID=exon-E3V84_10020-1;Parent=rna-E3V84_10020;anticodon=(pos:319..321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V84_10020;product=tRNA-Cys SOQE01000097.1 Genbank gene 546 1877 . - . ID=gene-E3V84_10025;Name=E3V84_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10025 SOQE01000097.1 Protein Homology CDS 546 1877 . - 0 ID=cds-TMR43774.1;Parent=gene-E3V84_10025;Dbxref=NCBI_GP:TMR43774.1;Name=TMR43774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359370.1;locus_tag=E3V84_10025;product=HlyC/CorC family transporter;protein_id=TMR43774.1;transl_table=11 SOQE01000097.1 Genbank gene 2140 2970 . - . ID=gene-E3V84_10030;Name=E3V84_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10030 SOQE01000097.1 Protein Homology CDS 2140 2970 . - 0 ID=cds-TMR43775.1;Parent=gene-E3V84_10030;Dbxref=NCBI_GP:TMR43775.1;Name=TMR43775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445459.1;locus_tag=E3V84_10030;product=DNA/RNA non-specific endonuclease;protein_id=TMR43775.1;transl_table=11 SOQE01000097.1 Genbank gene 3009 3203 . - . ID=gene-E3V84_10035;Name=E3V84_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10035 SOQE01000097.1 Protein Homology CDS 3009 3203 . - 0 ID=cds-TMR43805.1;Parent=gene-E3V84_10035;Dbxref=NCBI_GP:TMR43805.1;Name=TMR43805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445458.1;locus_tag=E3V84_10035;product=DNA-directed RNA polymerase subunit beta;protein_id=TMR43805.1;transl_table=11 SOQE01000097.1 Genbank gene 3190 4473 . - . ID=gene-E3V84_10040;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=E3V84_10040 SOQE01000097.1 Protein Homology CDS 3190 4473 . - 0 ID=cds-TMR43776.1;Parent=gene-E3V84_10040;Dbxref=NCBI_GP:TMR43776.1;Name=TMR43776.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359373.1;locus_tag=E3V84_10040;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMR43776.1;transl_table=11 SOQE01000097.1 Genbank gene 4497 4727 . - . ID=gene-E3V84_10045;Name=E3V84_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10045 SOQE01000097.1 Protein Homology CDS 4497 4727 . - 0 ID=cds-TMR43777.1;Parent=gene-E3V84_10045;Dbxref=NCBI_GP:TMR43777.1;Name=TMR43777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008719807.1;locus_tag=E3V84_10045;product=DUF1146 domain-containing protein;protein_id=TMR43777.1;transl_table=11 SOQE01000097.1 Genbank gene 4785 5822 . - . ID=gene-E3V84_10050;Name=E3V84_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10050 SOQE01000097.1 Protein Homology CDS 4785 5822 . - 0 ID=cds-TMR43778.1;Parent=gene-E3V84_10050;Dbxref=NCBI_GP:TMR43778.1;Name=TMR43778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359374.1;locus_tag=E3V84_10050;product=PDZ domain-containing protein;protein_id=TMR43778.1;transl_table=11 SOQE01000097.1 Genbank gene 5806 6294 . - . ID=gene-E3V84_10055;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=E3V84_10055 SOQE01000097.1 Protein Homology CDS 5806 6294 . - 0 ID=cds-TMR43779.1;Parent=gene-E3V84_10055;Dbxref=NCBI_GP:TMR43779.1;Name=TMR43779.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359375.1;locus_tag=E3V84_10055;product=pantetheine-phosphate adenylyltransferase;protein_id=TMR43779.1;transl_table=11 SOQE01000097.1 Genbank gene 6284 6823 . - . ID=gene-E3V84_10060;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=E3V84_10060 SOQE01000097.1 Protein Homology CDS 6284 6823 . - 0 ID=cds-TMR43780.1;Parent=gene-E3V84_10060;Dbxref=NCBI_GP:TMR43780.1;Name=TMR43780.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359376.1;locus_tag=E3V84_10060;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TMR43780.1;transl_table=11 SOQE01000097.1 Genbank gene 6888 7880 . - . ID=gene-E3V84_10065;Name=E3V84_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10065 SOQE01000097.1 Protein Homology CDS 6888 7880 . - 0 ID=cds-TMR43781.1;Parent=gene-E3V84_10065;Dbxref=NCBI_GP:TMR43781.1;Name=TMR43781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445453.1;locus_tag=E3V84_10065;product=aspartate--ammonia ligase;protein_id=TMR43781.1;transl_table=11 SOQE01000097.1 Genbank pseudogene 7854 7986 . + . ID=gene-E3V84_10070;Name=E3V84_10070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10070;pseudo=true SOQE01000097.1 Protein Homology CDS 7854 7986 . + 0 ID=cds-E3V84_10070;Parent=gene-E3V84_10070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816583.1;locus_tag=E3V84_10070;product=OxaA precursor;pseudo=true;transl_table=11 SOQE01000097.1 Genbank gene 7992 8675 . - . ID=gene-E3V84_10075;Name=E3V84_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10075 SOQE01000097.1 Protein Homology CDS 7992 8675 . - 0 ID=cds-TMR43782.1;Parent=gene-E3V84_10075;Dbxref=NCBI_GP:TMR43782.1;Name=TMR43782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445452.1;locus_tag=E3V84_10075;product=Bax inhibitor-1/YccA family protein;protein_id=TMR43782.1;transl_table=11 SOQE01000097.1 Genbank gene 8730 9470 . - . ID=gene-E3V84_10080;Name=E3V84_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10080 SOQE01000097.1 Protein Homology CDS 8730 9470 . - 0 ID=cds-TMR43783.1;Parent=gene-E3V84_10080;Dbxref=NCBI_GP:TMR43783.1;Name=TMR43783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445451.1;locus_tag=E3V84_10080;product=RNA methyltransferase;protein_id=TMR43783.1;transl_table=11 SOQE01000097.1 Genbank gene 9504 9782 . + . ID=gene-E3V84_10085;Name=E3V84_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10085 SOQE01000097.1 Protein Homology CDS 9504 9782 . + 0 ID=cds-TMR43784.1;Parent=gene-E3V84_10085;Dbxref=NCBI_GP:TMR43784.1;Name=TMR43784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359381.1;locus_tag=E3V84_10085;product=acylphosphatase;protein_id=TMR43784.1;transl_table=11 SOQE01000097.1 Genbank gene 9860 10786 . + . ID=gene-E3V84_10090;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=E3V84_10090 SOQE01000097.1 Protein Homology CDS 9860 10786 . + 0 ID=cds-TMR43785.1;Parent=gene-E3V84_10090;Dbxref=NCBI_GP:TMR43785.1;Name=TMR43785.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359382.1;locus_tag=E3V84_10090;product=membrane protein insertase YidC;protein_id=TMR43785.1;transl_table=11 SOQE01000097.1 Genbank gene 10861 11655 . - . ID=gene-E3V84_10095;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=E3V84_10095 SOQE01000097.1 Protein Homology CDS 10861 11655 . - 0 ID=cds-TMR43786.1;Parent=gene-E3V84_10095;Dbxref=NCBI_GP:TMR43786.1;Name=TMR43786.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359383.1;locus_tag=E3V84_10095;product=pyruvate formate lyase-activating protein;protein_id=TMR43786.1;transl_table=11 SOQE01000097.1 Genbank gene 11781 13031 . - . ID=gene-E3V84_10100;Name=E3V84_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10100 SOQE01000097.1 Protein Homology CDS 11781 13031 . - 0 ID=cds-TMR43787.1;Parent=gene-E3V84_10100;Dbxref=NCBI_GP:TMR43787.1;Name=TMR43787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445443.1;locus_tag=E3V84_10100;product=diaminopimelate decarboxylase;protein_id=TMR43787.1;transl_table=11 SOQE01000097.1 Genbank gene 13092 13919 . - . ID=gene-E3V84_10105;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=E3V84_10105 SOQE01000097.1 Protein Homology CDS 13092 13919 . - 0 ID=cds-TMR43788.1;Parent=gene-E3V84_10105;Dbxref=NCBI_GP:TMR43788.1;Name=TMR43788.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359385.1;locus_tag=E3V84_10105;product=pur operon repressor;protein_id=TMR43788.1;transl_table=11 SOQE01000097.1 Genbank gene 13885 14181 . + . ID=gene-E3V84_10110;Name=E3V84_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10110 SOQE01000097.1 Protein Homology CDS 13885 14181 . + 0 ID=cds-TMR43789.1;Parent=gene-E3V84_10110;Dbxref=NCBI_GP:TMR43789.1;Name=TMR43789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843947.1;locus_tag=E3V84_10110;product=hypothetical protein;protein_id=TMR43789.1;transl_table=11 SOQE01000097.1 Genbank gene 14183 15127 . - . ID=gene-E3V84_10115;Name=E3V84_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10115 SOQE01000097.1 Protein Homology CDS 14183 15127 . - 0 ID=cds-TMR43790.1;Parent=gene-E3V84_10115;Dbxref=NCBI_GP:TMR43790.1;Name=TMR43790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703190.1;locus_tag=E3V84_10115;product=HD domain-containing protein;protein_id=TMR43790.1;transl_table=11 SOQE01000097.1 Genbank gene 15117 16415 . - . ID=gene-E3V84_10120;Name=E3V84_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10120 SOQE01000097.1 Protein Homology CDS 15117 16415 . - 0 ID=cds-TMR43791.1;Parent=gene-E3V84_10120;Dbxref=NCBI_GP:TMR43791.1;Name=TMR43791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445439.1;locus_tag=E3V84_10120;product=DNA recombination protein RmuC;protein_id=TMR43791.1;transl_table=11 SOQE01000097.1 Genbank gene 16375 17037 . - . ID=gene-E3V84_10125;Name=E3V84_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10125 SOQE01000097.1 Protein Homology CDS 16375 17037 . - 0 ID=cds-TMR43792.1;Parent=gene-E3V84_10125;Dbxref=NCBI_GP:TMR43792.1;Name=TMR43792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445438.1;locus_tag=E3V84_10125;product=thiamine diphosphokinase;protein_id=TMR43792.1;transl_table=11 SOQE01000097.1 Genbank gene 17000 17656 . - . ID=gene-E3V84_10130;Name=E3V84_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10130 SOQE01000097.1 Protein Homology CDS 17000 17656 . - 0 ID=cds-TMR43793.1;Parent=gene-E3V84_10130;Dbxref=NCBI_GP:TMR43793.1;Name=TMR43793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359389.1;locus_tag=E3V84_10130;product=ribulose-phosphate 3-epimerase;protein_id=TMR43793.1;transl_table=11 SOQE01000097.1 Genbank gene 17667 18545 . - . ID=gene-E3V84_10135;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=E3V84_10135 SOQE01000097.1 Protein Homology CDS 17667 18545 . - 0 ID=cds-TMR43794.1;Parent=gene-E3V84_10135;Dbxref=NCBI_GP:TMR43794.1;Name=TMR43794.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359390.1;locus_tag=E3V84_10135;product=ribosome small subunit-dependent GTPase A;protein_id=TMR43794.1;transl_table=11 SOQE01000097.1 Genbank gene 18746 19144 . - . ID=gene-E3V84_10140;Name=E3V84_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10140 SOQE01000097.1 Protein Homology CDS 18746 19144 . - 0 ID=cds-TMR43795.1;Parent=gene-E3V84_10140;Dbxref=NCBI_GP:TMR43795.1;Name=TMR43795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230068.1;locus_tag=E3V84_10140;product=hypothetical protein;protein_id=TMR43795.1;transl_table=11 SOQE01000097.1 Genbank gene 19138 19911 . - . ID=gene-E3V84_10145;Name=E3V84_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10145 SOQE01000097.1 Protein Homology CDS 19138 19911 . - 0 ID=cds-TMR43796.1;Parent=gene-E3V84_10145;Dbxref=NCBI_GP:TMR43796.1;Name=TMR43796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227792.1;locus_tag=E3V84_10145;product=cell surface protein;protein_id=TMR43796.1;transl_table=11 SOQE01000097.1 Genbank gene 20601 21473 . - . ID=gene-E3V84_10150;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=E3V84_10150 SOQE01000097.1 Protein Homology CDS 20601 21473 . - 0 ID=cds-TMR43797.1;Parent=gene-E3V84_10150;Dbxref=NCBI_GP:TMR43797.1;Name=TMR43797.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445435.1;locus_tag=E3V84_10150;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=TMR43797.1;transl_table=11 SOQE01000097.1 Genbank gene 21754 22071 . - . ID=gene-E3V84_10155;Name=E3V84_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10155 SOQE01000097.1 Protein Homology CDS 21754 22071 . - 0 ID=cds-TMR43798.1;Parent=gene-E3V84_10155;Dbxref=NCBI_GP:TMR43798.1;Name=TMR43798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359392.1;locus_tag=E3V84_10155;product=hypothetical protein;protein_id=TMR43798.1;transl_table=11 SOQE01000097.1 Genbank gene 22058 22699 . - . ID=gene-E3V84_10160;Name=E3V84_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10160 SOQE01000097.1 Protein Homology CDS 22058 22699 . - 0 ID=cds-TMR43799.1;Parent=gene-E3V84_10160;Dbxref=NCBI_GP:TMR43799.1;Name=TMR43799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359393.1;locus_tag=E3V84_10160;product=ABC transporter ATP-binding protein;protein_id=TMR43799.1;transl_table=11 SOQE01000097.1 Genbank gene 22701 24743 . - . ID=gene-E3V84_10165;Name=E3V84_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10165 SOQE01000097.1 Protein Homology CDS 22701 24743 . - 0 ID=cds-TMR43800.1;Parent=gene-E3V84_10165;Dbxref=NCBI_GP:TMR43800.1;Name=TMR43800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359394.1;locus_tag=E3V84_10165;product=bacteriocin-associated integral membrane family protein;protein_id=TMR43800.1;transl_table=11 SOQE01000097.1 Genbank gene 25657 25842 . + . ID=gene-E3V84_10170;Name=E3V84_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10170 SOQE01000097.1 Protein Homology CDS 25657 25842 . + 0 ID=cds-TMR43801.1;Parent=gene-E3V84_10170;Dbxref=NCBI_GP:TMR43801.1;Name=TMR43801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V84_10170;product=hypothetical protein;protein_id=TMR43801.1;transl_table=11 SOQE01000097.1 Genbank gene 25823 26173 . + . ID=gene-E3V84_10175;Name=E3V84_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10175 SOQE01000097.1 Protein Homology CDS 25823 26173 . + 0 ID=cds-TMR43802.1;Parent=gene-E3V84_10175;Dbxref=NCBI_GP:TMR43802.1;Name=TMR43802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V84_10175;product=IS66 family insertion sequence hypothetical protein;protein_id=TMR43802.1;transl_table=11 SOQE01000097.1 Genbank gene 26228 26434 . + . ID=gene-E3V84_10180;Name=E3V84_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10180 SOQE01000097.1 Protein Homology CDS 26228 26434 . + 0 ID=cds-TMR43803.1;Parent=gene-E3V84_10180;Dbxref=NCBI_GP:TMR43803.1;Name=TMR43803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=E3V84_10180;product=transposase;protein_id=TMR43803.1;transl_table=11 SOQE01000097.1 Genbank gene 26337 26727 . + . ID=gene-E3V84_10185;Name=E3V84_10185;end_range=26727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10185;partial=true SOQE01000097.1 Protein Homology CDS 26337 26727 . + 0 ID=cds-TMR43804.1;Parent=gene-E3V84_10185;Dbxref=NCBI_GP:TMR43804.1;Name=TMR43804.1;end_range=26727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=E3V84_10185;partial=true;product=transposase;protein_id=TMR43804.1;transl_table=11 ##sequence-region SOQE01000098.1 1 28089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000098.1 Genbank region 1 28089 . + . ID=SOQE01000098.1:1..28089;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000098.1 Genbank gene 1 444 . - . ID=gene-E3V84_10190;Name=E3V84_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10190;partial=true;start_range=.,1 SOQE01000098.1 Protein Homology CDS 1 444 . - 0 ID=cds-TMR43675.1;Parent=gene-E3V84_10190;Dbxref=NCBI_GP:TMR43675.1;Name=TMR43675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V84_10190;partial=true;product=transposase;protein_id=TMR43675.1;start_range=.,1;transl_table=11 SOQE01000098.1 Genbank gene 431 757 . - . ID=gene-E3V84_10195;Name=E3V84_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10195 SOQE01000098.1 Protein Homology CDS 431 757 . - 0 ID=cds-TMR43676.1;Parent=gene-E3V84_10195;Dbxref=NCBI_GP:TMR43676.1;Name=TMR43676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V84_10195;product=transposase;protein_id=TMR43676.1;transl_table=11 SOQE01000098.1 Genbank gene 967 5760 . - . ID=gene-E3V84_10200;Name=E3V84_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10200 SOQE01000098.1 Protein Homology CDS 967 5760 . - 0 ID=cds-TMR43677.1;Parent=gene-E3V84_10200;Dbxref=NCBI_GP:TMR43677.1;Name=TMR43677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446500.1;locus_tag=E3V84_10200;product=serine protease;protein_id=TMR43677.1;transl_table=11 SOQE01000098.1 Genbank gene 6230 6382 . - . ID=gene-E3V84_10205;Name=E3V84_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10205 SOQE01000098.1 Protein Homology CDS 6230 6382 . - 0 ID=cds-TMR43697.1;Parent=gene-E3V84_10205;Dbxref=NCBI_GP:TMR43697.1;Name=TMR43697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V84_10205;product=transposase domain-containing protein;protein_id=TMR43697.1;transl_table=11 SOQE01000098.1 Genbank gene 6631 8358 . - . ID=gene-E3V84_10210;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=E3V84_10210 SOQE01000098.1 Protein Homology CDS 6631 8358 . - 0 ID=cds-TMR43678.1;Parent=gene-E3V84_10210;Dbxref=NCBI_GP:TMR43678.1;Name=TMR43678.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445977.1;locus_tag=E3V84_10210;product=septation ring formation regulator EzrA;protein_id=TMR43678.1;transl_table=11 SOQE01000098.1 Genbank gene 8440 10386 . - . ID=gene-E3V84_10215;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=E3V84_10215 SOQE01000098.1 Protein Homology CDS 8440 10386 . - 0 ID=cds-TMR43679.1;Parent=gene-E3V84_10215;Dbxref=NCBI_GP:TMR43679.1;Name=TMR43679.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358309.1;locus_tag=E3V84_10215;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=TMR43679.1;transl_table=11 SOQE01000098.1 Genbank gene 10401 10973 . - . ID=gene-E3V84_10220;Name=E3V84_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10220 SOQE01000098.1 Protein Homology CDS 10401 10973 . - 0 ID=cds-TMR43680.1;Parent=gene-E3V84_10220;Dbxref=NCBI_GP:TMR43680.1;Name=TMR43680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358308.1;locus_tag=E3V84_10220;product=HAD family hydrolase;protein_id=TMR43680.1;transl_table=11 SOQE01000098.1 Genbank gene 11049 11603 . - . ID=gene-E3V84_10225;Name=E3V84_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10225 SOQE01000098.1 Protein Homology CDS 11049 11603 . - 0 ID=cds-TMR43681.1;Parent=gene-E3V84_10225;Dbxref=NCBI_GP:TMR43681.1;Name=TMR43681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445973.1;locus_tag=E3V84_10225;product=DJ-1/PfpI family protein;protein_id=TMR43681.1;transl_table=11 SOQE01000098.1 Genbank gene 11614 12837 . - . ID=gene-E3V84_10230;Name=E3V84_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10230 SOQE01000098.1 Protein Homology CDS 11614 12837 . - 0 ID=cds-TMR43682.1;Parent=gene-E3V84_10230;Dbxref=NCBI_GP:TMR43682.1;Name=TMR43682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445972.1;locus_tag=E3V84_10230;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=TMR43682.1;transl_table=11 SOQE01000098.1 Genbank gene 12874 15324 . - . ID=gene-E3V84_10235;Name=E3V84_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10235 SOQE01000098.1 Protein Homology CDS 12874 15324 . - 0 ID=cds-TMR43683.1;Parent=gene-E3V84_10235;Dbxref=NCBI_GP:TMR43683.1;Name=TMR43683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358305.1;locus_tag=E3V84_10235;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=TMR43683.1;transl_table=11 SOQE01000098.1 Genbank gene 15308 15496 . - . ID=gene-E3V84_10240;Name=E3V84_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10240 SOQE01000098.1 Protein Homology CDS 15308 15496 . - 0 ID=cds-TMR43684.1;Parent=gene-E3V84_10240;Dbxref=NCBI_GP:TMR43684.1;Name=TMR43684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242435.1;locus_tag=E3V84_10240;product=hypothetical protein;protein_id=TMR43684.1;transl_table=11 SOQE01000098.1 Genbank gene 15524 16453 . - . ID=gene-E3V84_10245;Name=E3V84_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10245 SOQE01000098.1 Protein Homology CDS 15524 16453 . - 0 ID=cds-TMR43685.1;Parent=gene-E3V84_10245;Dbxref=NCBI_GP:TMR43685.1;Name=TMR43685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445970.1;locus_tag=E3V84_10245;product=U32 family peptidase;protein_id=TMR43685.1;transl_table=11 SOQE01000098.1 Genbank gene 16593 16880 . + . ID=gene-E3V84_10250;Name=E3V84_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10250 SOQE01000098.1 Protein Homology CDS 16593 16880 . + 0 ID=cds-TMR43686.1;Parent=gene-E3V84_10250;Dbxref=NCBI_GP:TMR43686.1;Name=TMR43686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358303.1;locus_tag=E3V84_10250;product=DUF3270 family protein;protein_id=TMR43686.1;transl_table=11 SOQE01000098.1 Genbank gene 17050 18384 . - . ID=gene-E3V84_10255;Name=E3V84_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10255 SOQE01000098.1 Protein Homology CDS 17050 18384 . - 0 ID=cds-TMR43687.1;Parent=gene-E3V84_10255;Dbxref=NCBI_GP:TMR43687.1;Name=TMR43687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358302.1;locus_tag=E3V84_10255;product=HAMP domain-containing histidine kinase;protein_id=TMR43687.1;transl_table=11 SOQE01000098.1 Genbank gene 18374 19048 . - . ID=gene-E3V84_10260;Name=E3V84_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10260 SOQE01000098.1 Protein Homology CDS 18374 19048 . - 0 ID=cds-TMR43688.1;Parent=gene-E3V84_10260;Dbxref=NCBI_GP:TMR43688.1;Name=TMR43688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445967.1;locus_tag=E3V84_10260;product=response regulator transcription factor;protein_id=TMR43688.1;transl_table=11 SOQE01000098.1 Genbank gene 19155 21701 . - . ID=gene-E3V84_10265;Name=E3V84_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10265 SOQE01000098.1 Protein Homology CDS 19155 21701 . - 0 ID=cds-TMR43689.1;Parent=gene-E3V84_10265;Dbxref=NCBI_GP:TMR43689.1;Name=TMR43689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445966.1;locus_tag=E3V84_10265;product=aminopeptidase;protein_id=TMR43689.1;transl_table=11 SOQE01000098.1 Genbank gene 21824 22264 . - . ID=gene-E3V84_10270;Name=E3V84_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10270 SOQE01000098.1 Protein Homology CDS 21824 22264 . - 0 ID=cds-TMR43690.1;Parent=gene-E3V84_10270;Dbxref=NCBI_GP:TMR43690.1;Name=TMR43690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358299.1;locus_tag=E3V84_10270;product=ASCH domain-containing protein;protein_id=TMR43690.1;transl_table=11 SOQE01000098.1 Genbank pseudogene 22239 23103 . - . ID=gene-E3V84_10275;Name=E3V84_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10275;pseudo=true SOQE01000098.1 Protein Homology CDS 22239 23103 . - 0 ID=cds-E3V84_10275;Parent=gene-E3V84_10275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358298.1;locus_tag=E3V84_10275;product=PEP-utilizing enzyme%2C TIM barrel domain protein;pseudo=true;transl_table=11 SOQE01000098.1 Genbank gene 23139 23867 . - . ID=gene-E3V84_10280;Name=E3V84_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10280 SOQE01000098.1 Protein Homology CDS 23139 23867 . - 0 ID=cds-TMR43691.1;Parent=gene-E3V84_10280;Dbxref=NCBI_GP:TMR43691.1;Name=TMR43691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358297.1;locus_tag=E3V84_10280;product=GNAT family N-acetyltransferase;protein_id=TMR43691.1;transl_table=11 SOQE01000098.1 Genbank pseudogene 23875 24354 . - . ID=gene-E3V84_10285;Name=E3V84_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10285;pseudo=true SOQE01000098.1 Protein Homology CDS 23875 24354 . - 0 ID=cds-E3V84_10285;Parent=gene-E3V84_10285;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445962.1;locus_tag=E3V84_10285;product=NUDIX domain-containing protein;pseudo=true;transl_table=11 SOQE01000098.1 Genbank gene 24364 25062 . - . ID=gene-E3V84_10290;Name=E3V84_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10290 SOQE01000098.1 Protein Homology CDS 24364 25062 . - 0 ID=cds-TMR43692.1;Parent=gene-E3V84_10290;Dbxref=NCBI_GP:TMR43692.1;Name=TMR43692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358295.1;locus_tag=E3V84_10290;product=3-oxoacyl-ACP reductase;protein_id=TMR43692.1;transl_table=11 SOQE01000098.1 Genbank gene 25055 25291 . - . ID=gene-E3V84_10295;Name=E3V84_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10295 SOQE01000098.1 Protein Homology CDS 25055 25291 . - 0 ID=cds-TMR43693.1;Parent=gene-E3V84_10295;Dbxref=NCBI_GP:TMR43693.1;Name=TMR43693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445960.1;locus_tag=E3V84_10295;product=DUF2829 domain-containing protein;protein_id=TMR43693.1;transl_table=11 SOQE01000098.1 Genbank gene 25391 26317 . - . ID=gene-E3V84_10300;Name=E3V84_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10300 SOQE01000098.1 Protein Homology CDS 25391 26317 . - 0 ID=cds-TMR43694.1;Parent=gene-E3V84_10300;Dbxref=NCBI_GP:TMR43694.1;Name=TMR43694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445959.1;locus_tag=E3V84_10300;product=aldo/keto reductase family oxidoreductase;protein_id=TMR43694.1;transl_table=11 SOQE01000098.1 Genbank gene 26390 27205 . - . ID=gene-E3V84_10305;Name=E3V84_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10305 SOQE01000098.1 Protein Homology CDS 26390 27205 . - 0 ID=cds-TMR43695.1;Parent=gene-E3V84_10305;Dbxref=NCBI_GP:TMR43695.1;Name=TMR43695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358292.1;locus_tag=E3V84_10305;product=hypothetical protein;protein_id=TMR43695.1;transl_table=11 SOQE01000098.1 Genbank gene 27209 27532 . - . ID=gene-E3V84_10310;Name=E3V84_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10310 SOQE01000098.1 Protein Homology CDS 27209 27532 . - 0 ID=cds-TMR43696.1;Parent=gene-E3V84_10310;Dbxref=NCBI_GP:TMR43696.1;Name=TMR43696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358291.1;locus_tag=E3V84_10310;product=PadR family transcriptional regulator;protein_id=TMR43696.1;transl_table=11 SOQE01000098.1 Genbank pseudogene 27790 27855 . - . ID=gene-E3V84_10315;Name=E3V84_10315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10315;pseudo=true SOQE01000098.1 Protein Homology CDS 27790 27855 . - 0 ID=cds-E3V84_10315;Parent=gene-E3V84_10315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V84_10315;product=chlorohydrolase;pseudo=true;transl_table=11 SOQE01000098.1 Genbank gene 28001 28089 . - . ID=gene-E3V84_10320;Name=E3V84_10320;end_range=28089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10320;partial=true SOQE01000098.1 Protein Homology CDS 28001 28089 . - 2 ID=cds-TMR43698.1;Parent=gene-E3V84_10320;Dbxref=NCBI_GP:TMR43698.1;Name=TMR43698.1;end_range=28089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V84_10320;partial=true;product=IS200/IS605 family transposase;protein_id=TMR43698.1;transl_table=11 ##sequence-region SOQE01000099.1 1 24389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQE01000099.1 Genbank region 1 24389 . + . ID=SOQE01000099.1:1..24389;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=Belgium;gbkey=Src;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN918 SOQE01000099.1 Genbank gene 1 118 . - . ID=gene-E3V84_10325;Name=E3V84_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10325;partial=true;start_range=.,1 SOQE01000099.1 Protein Homology CDS 1 118 . - 0 ID=cds-TMR43602.1;Parent=gene-E3V84_10325;Dbxref=NCBI_GP:TMR43602.1;Name=TMR43602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V84_10325;partial=true;product=IS630 family transposase;protein_id=TMR43602.1;start_range=.,1;transl_table=11 SOQE01000099.1 Genbank gene 290 757 . + . ID=gene-E3V84_10330;Name=E3V84_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10330 SOQE01000099.1 Protein Homology CDS 290 757 . + 0 ID=cds-TMR43603.1;Parent=gene-E3V84_10330;Dbxref=NCBI_GP:TMR43603.1;Name=TMR43603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358961.1;locus_tag=E3V84_10330;product=GNAT family N-acetyltransferase;protein_id=TMR43603.1;transl_table=11 SOQE01000099.1 Genbank gene 1187 1387 . + . ID=gene-E3V84_10335;Name=E3V84_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10335 SOQE01000099.1 Protein Homology CDS 1187 1387 . + 0 ID=cds-TMR43604.1;Parent=gene-E3V84_10335;Dbxref=NCBI_GP:TMR43604.1;Name=TMR43604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358959.1;locus_tag=E3V84_10335;product=F0F1 ATP synthase subunit C;protein_id=TMR43604.1;transl_table=11 SOQE01000099.1 Genbank gene 1422 2138 . + . ID=gene-E3V84_10340;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=E3V84_10340 SOQE01000099.1 Protein Homology CDS 1422 2138 . + 0 ID=cds-TMR43605.1;Parent=gene-E3V84_10340;Dbxref=NCBI_GP:TMR43605.1;Name=TMR43605.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358958.1;locus_tag=E3V84_10340;product=F0F1 ATP synthase subunit A;protein_id=TMR43605.1;transl_table=11 SOQE01000099.1 Genbank gene 2152 2646 . + . ID=gene-E3V84_10345;Name=E3V84_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10345 SOQE01000099.1 Protein Homology CDS 2152 2646 . + 0 ID=cds-TMR43606.1;Parent=gene-E3V84_10345;Dbxref=NCBI_GP:TMR43606.1;Name=TMR43606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446421.1;locus_tag=E3V84_10345;product=ATP synthase F0 subunit B;protein_id=TMR43606.1;transl_table=11 SOQE01000099.1 Genbank gene 2646 3182 . + . ID=gene-E3V84_10350;Name=E3V84_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10350 SOQE01000099.1 Protein Homology CDS 2646 3182 . + 0 ID=cds-TMR43607.1;Parent=gene-E3V84_10350;Dbxref=NCBI_GP:TMR43607.1;Name=TMR43607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358956.1;locus_tag=E3V84_10350;product=F0F1 ATP synthase subunit delta;protein_id=TMR43607.1;transl_table=11 SOQE01000099.1 Genbank gene 3197 4702 . + . ID=gene-E3V84_10355;Name=E3V84_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10355 SOQE01000099.1 Protein Homology CDS 3197 4702 . + 0 ID=cds-TMR43608.1;Parent=gene-E3V84_10355;Dbxref=NCBI_GP:TMR43608.1;Name=TMR43608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446419.1;locus_tag=E3V84_10355;product=F0F1 ATP synthase subunit alpha;protein_id=TMR43608.1;transl_table=11 SOQE01000099.1 Genbank gene 4718 5596 . + . ID=gene-E3V84_10360;Name=E3V84_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10360 SOQE01000099.1 Protein Homology CDS 4718 5596 . + 0 ID=cds-TMR43609.1;Parent=gene-E3V84_10360;Dbxref=NCBI_GP:TMR43609.1;Name=TMR43609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358954.1;locus_tag=E3V84_10360;product=F0F1 ATP synthase subunit gamma;protein_id=TMR43609.1;transl_table=11 SOQE01000099.1 Genbank gene 5682 7088 . + . ID=gene-E3V84_10365;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=E3V84_10365 SOQE01000099.1 Protein Homology CDS 5682 7088 . + 0 ID=cds-TMR43610.1;Parent=gene-E3V84_10365;Dbxref=NCBI_GP:TMR43610.1;Name=TMR43610.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=E3V84_10365;product=F0F1 ATP synthase subunit beta;protein_id=TMR43610.1;transl_table=11 SOQE01000099.1 Genbank gene 7099 7518 . + . ID=gene-E3V84_10370;Name=E3V84_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10370 SOQE01000099.1 Protein Homology CDS 7099 7518 . + 0 ID=cds-TMR43611.1;Parent=gene-E3V84_10370;Dbxref=NCBI_GP:TMR43611.1;Name=TMR43611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358952.1;locus_tag=E3V84_10370;product=F0F1 ATP synthase subunit epsilon;protein_id=TMR43611.1;transl_table=11 SOQE01000099.1 Genbank gene 7762 8775 . - . ID=gene-E3V84_10375;Name=E3V84_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10375 SOQE01000099.1 Protein Homology CDS 7762 8775 . - 0 ID=cds-TMR43612.1;Parent=gene-E3V84_10375;Dbxref=NCBI_GP:TMR43612.1;Name=TMR43612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358951.1;locus_tag=E3V84_10375;product=6-phosphogluconolactonase;protein_id=TMR43612.1;transl_table=11 SOQE01000099.1 Genbank gene 8919 10085 . + . ID=gene-E3V84_10380;Name=E3V84_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10380 SOQE01000099.1 Protein Homology CDS 8919 10085 . + 0 ID=cds-TMR43613.1;Parent=gene-E3V84_10380;Dbxref=NCBI_GP:TMR43613.1;Name=TMR43613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358950.1;locus_tag=E3V84_10380;product=AI-2E family transporter;protein_id=TMR43613.1;transl_table=11 SOQE01000099.1 Genbank gene 10093 11304 . + . ID=gene-E3V84_10385;Name=E3V84_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10385 SOQE01000099.1 Protein Homology CDS 10093 11304 . + 0 ID=cds-TMR43622.1;Parent=gene-E3V84_10385;Dbxref=NCBI_GP:TMR43622.1;Name=TMR43622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446408.1;locus_tag=E3V84_10385;product=tetratricopeptide repeat protein;protein_id=TMR43622.1;transl_table=11 SOQE01000099.1 Genbank gene 11450 12091 . + . ID=gene-E3V84_10390;Name=E3V84_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10390 SOQE01000099.1 Protein Homology CDS 11450 12091 . + 0 ID=cds-TMR43614.1;Parent=gene-E3V84_10390;Dbxref=NCBI_GP:TMR43614.1;Name=TMR43614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446407.1;locus_tag=E3V84_10390;product=amino acid ABC transporter permease;protein_id=TMR43614.1;transl_table=11 SOQE01000099.1 Genbank gene 12101 12730 . + . ID=gene-E3V84_10395;Name=E3V84_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10395 SOQE01000099.1 Protein Homology CDS 12101 12730 . + 0 ID=cds-TMR43615.1;Parent=gene-E3V84_10395;Dbxref=NCBI_GP:TMR43615.1;Name=TMR43615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358947.1;locus_tag=E3V84_10395;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR43615.1;transl_table=11 SOQE01000099.1 Genbank gene 12743 13579 . + . ID=gene-E3V84_10400;Name=E3V84_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10400 SOQE01000099.1 Protein Homology CDS 12743 13579 . + 0 ID=cds-TMR43616.1;Parent=gene-E3V84_10400;Dbxref=NCBI_GP:TMR43616.1;Name=TMR43616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358946.1;locus_tag=E3V84_10400;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR43616.1;transl_table=11 SOQE01000099.1 Genbank gene 13495 13731 . - . ID=gene-E3V84_10405;Name=E3V84_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10405 SOQE01000099.1 Protein Homology CDS 13495 13731 . - 0 ID=cds-TMR43617.1;Parent=gene-E3V84_10405;Dbxref=NCBI_GP:TMR43617.1;Name=TMR43617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844800.1;locus_tag=E3V84_10405;product=hypothetical protein;protein_id=TMR43617.1;transl_table=11 SOQE01000099.1 Genbank gene 13856 14203 . - . ID=gene-E3V84_10410;Name=E3V84_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10410 SOQE01000099.1 Protein Homology CDS 13856 14203 . - 0 ID=cds-TMR43618.1;Parent=gene-E3V84_10410;Dbxref=NCBI_GP:TMR43618.1;Name=TMR43618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446285.1;locus_tag=E3V84_10410;product=thioredoxin;protein_id=TMR43618.1;transl_table=11 SOQE01000099.1 Genbank gene 14315 16033 . - . ID=gene-E3V84_10415;Name=E3V84_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10415 SOQE01000099.1 Protein Homology CDS 14315 16033 . - 0 ID=cds-TMR43619.1;Parent=gene-E3V84_10415;Dbxref=NCBI_GP:TMR43619.1;Name=TMR43619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446284.1;locus_tag=E3V84_10415;product=phospho-sugar mutase;protein_id=TMR43619.1;transl_table=11 SOQE01000099.1 Genbank pseudogene 16312 16440 . + . ID=gene-E3V84_10420;Name=E3V84_10420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10420;pseudo=true SOQE01000099.1 Protein Homology CDS 16312 16440 . + 0 ID=cds-E3V84_10420;Parent=gene-E3V84_10420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=E3V84_10420;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQE01000099.1 Genbank pseudogene 18736 19357 . + . ID=gene-E3V84_10425;Name=E3V84_10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10425;pseudo=true SOQE01000099.1 Protein Homology CDS 18736 19357 . + 0 ID=cds-E3V84_10425;Parent=gene-E3V84_10425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818859.1;locus_tag=E3V84_10425;product=hypothetical protein;pseudo=true;transl_table=11 SOQE01000099.1 Genbank pseudogene 19315 19623 . + . ID=gene-E3V84_10430;Name=E3V84_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10430;pseudo=true SOQE01000099.1 Protein Homology CDS 19315 19623 . + 0 ID=cds-E3V84_10430;Parent=gene-E3V84_10430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248972.1;locus_tag=E3V84_10430;product=cell surface protein;pseudo=true;transl_table=11 SOQE01000099.1 Genbank pseudogene 20206 20799 . + . ID=gene-E3V84_10435;Name=E3V84_10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10435;pseudo=true SOQE01000099.1 Protein Homology CDS 20206 20799 . + 0 ID=cds-E3V84_10435;Parent=gene-E3V84_10435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237972.1;locus_tag=E3V84_10435;product=adhesin;pseudo=true;transl_table=11 SOQE01000099.1 Genbank gene 21709 22359 . + . ID=gene-E3V84_10440;Name=E3V84_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10440 SOQE01000099.1 Protein Homology CDS 21709 22359 . + 0 ID=cds-TMR43623.1;Parent=gene-E3V84_10440;Dbxref=NCBI_GP:TMR43623.1;Name=TMR43623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248972.1;locus_tag=E3V84_10440;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR43623.1;transl_table=11 SOQE01000099.1 Genbank gene 22582 23451 . + . ID=gene-E3V84_10445;Name=E3V84_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10445 SOQE01000099.1 Protein Homology CDS 22582 23451 . + 0 ID=cds-TMR43620.1;Parent=gene-E3V84_10445;Dbxref=NCBI_GP:TMR43620.1;Name=TMR43620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358937.1;locus_tag=E3V84_10445;product=aquaporin family protein;protein_id=TMR43620.1;transl_table=11 SOQE01000099.1 Genbank gene 23613 23804 . - . ID=gene-E3V84_10450;Name=E3V84_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V84_10450 SOQE01000099.1 Protein Homology CDS 23613 23804 . - 0 ID=cds-TMR43621.1;Parent=gene-E3V84_10450;Dbxref=NCBI_GP:TMR43621.1;Name=TMR43621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461753.1;locus_tag=E3V84_10450;product=hypothetical protein;protein_id=TMR43621.1;transl_table=11 SOQE01000099.1 Genbank pseudogene 24068 24389 . - . ID=gene-E3V84_10455;Name=E3V84_10455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V84_10455;pseudo=true SOQE01000099.1 Protein Homology CDS 24068 24389 . - 1 ID=cds-E3V84_10455;Parent=gene-E3V84_10455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V84_10455;product=IS30 family transposase;pseudo=true;transl_table=11 ###