##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM589062v1 #!genome-build-accession NCBI_Assembly:GCA_005890625.1 #!annotation-date 03/21/2019 17:52:57 #!annotation-source NCBI ##sequence-region SOQV01000001.1 1 53066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000001.1 Genbank region 1 53066 . + . ID=SOQV01000001.1:1..53066;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000001.1 Genbank gene 288 596 . + . ID=gene-E3V42_00005;Name=E3V42_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00005 SOQV01000001.1 Protein Homology CDS 288 596 . + 0 ID=cds-TMR85620.1;Parent=gene-E3V42_00005;Dbxref=NCBI_GP:TMR85620.1;Name=TMR85620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445821.1;locus_tag=E3V42_00005;product=hypothetical protein;protein_id=TMR85620.1;transl_table=11 SOQV01000001.1 Genbank gene 566 676 . - . ID=gene-E3V42_00010;Name=E3V42_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00010 SOQV01000001.1 Protein Homology CDS 566 676 . - 0 ID=cds-TMR85670.1;Parent=gene-E3V42_00010;Dbxref=NCBI_GP:TMR85670.1;Name=TMR85670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V42_00010;product=lysyl-tRNA synthetase;protein_id=TMR85670.1;transl_table=11 SOQV01000001.1 Genbank gene 892 1389 . + . ID=gene-E3V42_00015;Name=E3V42_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00015 SOQV01000001.1 Protein Homology CDS 892 1389 . + 0 ID=cds-TMR85621.1;Parent=gene-E3V42_00015;Dbxref=NCBI_GP:TMR85621.1;Name=TMR85621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446134.1;locus_tag=E3V42_00015;product=PTS sugar transporter subunit IIA;protein_id=TMR85621.1;transl_table=11 SOQV01000001.1 Genbank gene 1427 1732 . + . ID=gene-E3V42_00020;Name=E3V42_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00020 SOQV01000001.1 Protein Homology CDS 1427 1732 . + 0 ID=cds-TMR85622.1;Parent=gene-E3V42_00020;Dbxref=NCBI_GP:TMR85622.1;Name=TMR85622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358157.1;locus_tag=E3V42_00020;product=PTS sugar transporter subunit IIB;protein_id=TMR85622.1;transl_table=11 SOQV01000001.1 Genbank gene 1780 3255 . + . ID=gene-E3V42_00025;Name=E3V42_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00025 SOQV01000001.1 Protein Homology CDS 1780 3255 . + 0 ID=cds-TMR85623.1;Parent=gene-E3V42_00025;Dbxref=NCBI_GP:TMR85623.1;Name=TMR85623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358158.1;locus_tag=E3V42_00025;product=PTS galactitol transporter subunit IIC;protein_id=TMR85623.1;transl_table=11 SOQV01000001.1 Genbank gene 3356 3613 . + . ID=gene-E3V42_00030;Name=E3V42_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00030 SOQV01000001.1 Protein Homology CDS 3356 3613 . + 0 ID=cds-TMR85624.1;Parent=gene-E3V42_00030;Dbxref=NCBI_GP:TMR85624.1;Name=TMR85624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V42_00030;product=hypothetical protein;protein_id=TMR85624.1;transl_table=11 SOQV01000001.1 Genbank gene 3701 10402 . + . ID=gene-E3V42_00035;Name=E3V42_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00035 SOQV01000001.1 Protein Homology CDS 3701 10402 . + 0 ID=cds-TMR85625.1;Parent=gene-E3V42_00035;Dbxref=NCBI_GP:TMR85625.1;Name=TMR85625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358159.1;locus_tag=E3V42_00035;product=DUF4982 domain-containing protein;protein_id=TMR85625.1;transl_table=11 SOQV01000001.1 Genbank gene 10650 11648 . - . ID=gene-E3V42_00040;Name=E3V42_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00040 SOQV01000001.1 Protein Homology CDS 10650 11648 . - 0 ID=cds-TMR85626.1;Parent=gene-E3V42_00040;Dbxref=NCBI_GP:TMR85626.1;Name=TMR85626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125496.1;locus_tag=E3V42_00040;product=DDE transposase;protein_id=TMR85626.1;transl_table=11 SOQV01000001.1 Genbank gene 11858 12217 . - . ID=gene-E3V42_00045;Name=E3V42_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00045 SOQV01000001.1 Protein Homology CDS 11858 12217 . - 0 ID=cds-TMR85627.1;Parent=gene-E3V42_00045;Dbxref=NCBI_GP:TMR85627.1;Name=TMR85627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358162.1;locus_tag=E3V42_00045;product=DUF3397 domain-containing protein;protein_id=TMR85627.1;transl_table=11 SOQV01000001.1 Genbank gene 12141 12818 . + . ID=gene-E3V42_00050;Name=E3V42_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00050 SOQV01000001.1 Protein Homology CDS 12141 12818 . + 0 ID=cds-TMR85628.1;Parent=gene-E3V42_00050;Dbxref=NCBI_GP:TMR85628.1;Name=TMR85628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358163.1;locus_tag=E3V42_00050;product=TIGR01212 family radical SAM protein;protein_id=TMR85628.1;transl_table=11 SOQV01000001.1 Genbank gene 12819 13265 . + . ID=gene-E3V42_00055;Name=E3V42_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00055 SOQV01000001.1 Protein Homology CDS 12819 13265 . + 0 ID=cds-TMR85629.1;Parent=gene-E3V42_00055;Dbxref=NCBI_GP:TMR85629.1;Name=TMR85629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397999.1;locus_tag=E3V42_00055;product=radical SAM protein;protein_id=TMR85629.1;transl_table=11 SOQV01000001.1 Genbank gene 13243 13806 . + . ID=gene-E3V42_00060;Name=E3V42_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00060 SOQV01000001.1 Protein Homology CDS 13243 13806 . + 0 ID=cds-TMR85630.1;Parent=gene-E3V42_00060;Dbxref=NCBI_GP:TMR85630.1;Name=TMR85630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358165.1;locus_tag=E3V42_00060;product=methyltransferase domain-containing protein;protein_id=TMR85630.1;transl_table=11 SOQV01000001.1 Genbank gene 13799 14053 . + . ID=gene-E3V42_00065;Name=E3V42_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00065 SOQV01000001.1 Protein Homology CDS 13799 14053 . + 0 ID=cds-TMR85631.1;Parent=gene-E3V42_00065;Dbxref=NCBI_GP:TMR85631.1;Name=TMR85631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358166.1;locus_tag=E3V42_00065;product=hypothetical protein;protein_id=TMR85631.1;transl_table=11 SOQV01000001.1 Genbank gene 14065 16119 . + . ID=gene-E3V42_00070;Name=E3V42_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00070 SOQV01000001.1 Protein Homology CDS 14065 16119 . + 0 ID=cds-TMR85632.1;Parent=gene-E3V42_00070;Dbxref=NCBI_GP:TMR85632.1;Name=TMR85632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358167.1;locus_tag=E3V42_00070;product=sodium:proton antiporter;protein_id=TMR85632.1;transl_table=11 SOQV01000001.1 Genbank gene 16283 17158 . + . ID=gene-E3V42_00075;Name=E3V42_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00075 SOQV01000001.1 Protein Homology CDS 16283 17158 . + 0 ID=cds-TMR85633.1;Parent=gene-E3V42_00075;Dbxref=NCBI_GP:TMR85633.1;Name=TMR85633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358168.1;locus_tag=E3V42_00075;product=YihY/virulence factor BrkB family protein;protein_id=TMR85633.1;transl_table=11 SOQV01000001.1 Genbank gene 17368 18078 . + . ID=gene-E3V42_00080;Name=E3V42_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00080 SOQV01000001.1 Protein Homology CDS 17368 18078 . + 0 ID=cds-TMR85634.1;Parent=gene-E3V42_00080;Dbxref=NCBI_GP:TMR85634.1;Name=TMR85634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358169.1;locus_tag=E3V42_00080;product=cytochrome c biogenesis protein CcdA;protein_id=TMR85634.1;transl_table=11 SOQV01000001.1 Genbank gene 18098 18664 . + . ID=gene-E3V42_00085;Name=E3V42_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00085 SOQV01000001.1 Protein Homology CDS 18098 18664 . + 0 ID=cds-TMR85635.1;Parent=gene-E3V42_00085;Dbxref=NCBI_GP:TMR85635.1;Name=TMR85635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759281.1;locus_tag=E3V42_00085;product=redoxin domain-containing protein;protein_id=TMR85635.1;transl_table=11 SOQV01000001.1 Genbank gene 18675 19787 . + . ID=gene-E3V42_00090;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=E3V42_00090 SOQV01000001.1 Protein Homology CDS 18675 19787 . + 0 ID=cds-TMR85636.1;Parent=gene-E3V42_00090;Dbxref=NCBI_GP:TMR85636.1;Name=TMR85636.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358171.1;locus_tag=E3V42_00090;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=TMR85636.1;transl_table=11 SOQV01000001.1 Genbank gene 20125 20862 . + . ID=gene-E3V42_00095;Name=E3V42_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00095 SOQV01000001.1 Protein Homology CDS 20125 20862 . + 0 ID=cds-TMR85637.1;Parent=gene-E3V42_00095;Dbxref=NCBI_GP:TMR85637.1;Name=TMR85637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446587.1;locus_tag=E3V42_00095;product=response regulator transcription factor;protein_id=TMR85637.1;transl_table=11 SOQV01000001.1 Genbank gene 20859 22550 . + . ID=gene-E3V42_00100;Name=E3V42_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00100 SOQV01000001.1 Protein Homology CDS 20859 22550 . + 0 ID=cds-TMR85638.1;Parent=gene-E3V42_00100;Dbxref=NCBI_GP:TMR85638.1;Name=TMR85638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358173.1;locus_tag=E3V42_00100;product=sensor histidine kinase;protein_id=TMR85638.1;transl_table=11 SOQV01000001.1 Genbank gene 22644 23228 . + . ID=gene-E3V42_00105;Name=E3V42_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00105 SOQV01000001.1 Protein Homology CDS 22644 23228 . + 0 ID=cds-TMR85639.1;Parent=gene-E3V42_00105;Dbxref=NCBI_GP:TMR85639.1;Name=TMR85639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446585.1;locus_tag=E3V42_00105;product=TIGR01440 family protein;protein_id=TMR85639.1;transl_table=11 SOQV01000001.1 Genbank gene 23250 30257 . + . ID=gene-E3V42_00110;Name=E3V42_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00110 SOQV01000001.1 Protein Homology CDS 23250 30257 . + 0 ID=cds-TMR85640.1;Parent=gene-E3V42_00110;Dbxref=NCBI_GP:TMR85640.1;Name=TMR85640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472959.1;locus_tag=E3V42_00110;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR85640.1;transl_table=11 SOQV01000001.1 Genbank gene 30318 32039 . + . ID=gene-E3V42_00115;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=E3V42_00115 SOQV01000001.1 Protein Homology CDS 30318 32039 . + 0 ID=cds-TMR85641.1;Parent=gene-E3V42_00115;Dbxref=NCBI_GP:TMR85641.1;Name=TMR85641.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358176.1;locus_tag=E3V42_00115;product=aminodeoxychorismate synthase component I;protein_id=TMR85641.1;transl_table=11 SOQV01000001.1 Genbank gene 32040 32657 . + . ID=gene-E3V42_00120;Name=E3V42_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00120 SOQV01000001.1 Protein Homology CDS 32040 32657 . + 0 ID=cds-TMR85642.1;Parent=gene-E3V42_00120;Dbxref=NCBI_GP:TMR85642.1;Name=TMR85642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446582.1;locus_tag=E3V42_00120;product=alpha/beta hydrolase;protein_id=TMR85642.1;transl_table=11 SOQV01000001.1 Genbank gene 32707 34074 . + . ID=gene-E3V42_00125;Name=E3V42_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00125 SOQV01000001.1 Protein Homology CDS 32707 34074 . + 0 ID=cds-TMR85643.1;Parent=gene-E3V42_00125;Dbxref=NCBI_GP:TMR85643.1;Name=TMR85643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361341.1;locus_tag=E3V42_00125;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMR85643.1;transl_table=11 SOQV01000001.1 Genbank gene 34179 35138 . + . ID=gene-E3V42_00130;Name=E3V42_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00130 SOQV01000001.1 Protein Homology CDS 34179 35138 . + 0 ID=cds-TMR85644.1;Parent=gene-E3V42_00130;Dbxref=NCBI_GP:TMR85644.1;Name=TMR85644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446580.1;locus_tag=E3V42_00130;product=ROK family glucokinase;protein_id=TMR85644.1;transl_table=11 SOQV01000001.1 Genbank gene 35236 36075 . + . ID=gene-E3V42_00135;Name=E3V42_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00135 SOQV01000001.1 Protein Homology CDS 35236 36075 . + 0 ID=cds-TMR85645.1;Parent=gene-E3V42_00135;Dbxref=NCBI_GP:TMR85645.1;Name=TMR85645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011065.1;locus_tag=E3V42_00135;product=thymidylate synthase;protein_id=TMR85645.1;transl_table=11 SOQV01000001.1 Genbank gene 36289 36459 . - . ID=gene-E3V42_00140;Name=E3V42_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00140 SOQV01000001.1 Protein Homology CDS 36289 36459 . - 0 ID=cds-TMR85646.1;Parent=gene-E3V42_00140;Dbxref=NCBI_GP:TMR85646.1;Name=TMR85646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358180.1;locus_tag=E3V42_00140;product=DUF3042 family protein;protein_id=TMR85646.1;transl_table=11 SOQV01000001.1 Genbank gene 36580 37464 . + . ID=gene-E3V42_00145;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=E3V42_00145 SOQV01000001.1 Protein Homology CDS 36580 37464 . + 0 ID=cds-TMR85647.1;Parent=gene-E3V42_00145;Dbxref=NCBI_GP:TMR85647.1;Name=TMR85647.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446577.1;locus_tag=E3V42_00145;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=TMR85647.1;transl_table=11 SOQV01000001.1 Genbank gene 37457 38695 . + . ID=gene-E3V42_00150;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=E3V42_00150 SOQV01000001.1 Protein Homology CDS 37457 38695 . + 0 ID=cds-TMR85648.1;Parent=gene-E3V42_00150;Dbxref=NCBI_GP:TMR85648.1;Name=TMR85648.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446576.1;locus_tag=E3V42_00150;product=GTPase HflX;protein_id=TMR85648.1;transl_table=11 SOQV01000001.1 Genbank gene 38688 39311 . + . ID=gene-E3V42_00155;Name=E3V42_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00155 SOQV01000001.1 Protein Homology CDS 38688 39311 . + 0 ID=cds-TMR85649.1;Parent=gene-E3V42_00155;Dbxref=NCBI_GP:TMR85649.1;Name=TMR85649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446575.1;locus_tag=E3V42_00155;product=cystathionine beta-lyase;protein_id=TMR85649.1;transl_table=11 SOQV01000001.1 Genbank gene 39326 40255 . + . ID=gene-E3V42_00160;Name=E3V42_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00160 SOQV01000001.1 Protein Homology CDS 39326 40255 . + 0 ID=cds-TMR85650.1;Parent=gene-E3V42_00160;Dbxref=NCBI_GP:TMR85650.1;Name=TMR85650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358185.1;locus_tag=E3V42_00160;product=ribonuclease Z;protein_id=TMR85650.1;transl_table=11 SOQV01000001.1 Genbank gene 40276 41031 . + . ID=gene-E3V42_00165;Name=E3V42_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00165 SOQV01000001.1 Protein Homology CDS 40276 41031 . + 0 ID=cds-TMR85651.1;Parent=gene-E3V42_00165;Dbxref=NCBI_GP:TMR85651.1;Name=TMR85651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446573.1;locus_tag=E3V42_00165;product=SDR family oxidoreductase;protein_id=TMR85651.1;transl_table=11 SOQV01000001.1 Genbank gene 41086 41994 . - . ID=gene-E3V42_00170;Name=E3V42_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00170 SOQV01000001.1 Protein Homology CDS 41086 41994 . - 0 ID=cds-TMR85652.1;Parent=gene-E3V42_00170;Dbxref=NCBI_GP:TMR85652.1;Name=TMR85652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446563.1;locus_tag=E3V42_00170;product=LysR family transcriptional regulator;protein_id=TMR85652.1;transl_table=11 SOQV01000001.1 Genbank gene 42106 42327 . + . ID=gene-E3V42_00175;Name=E3V42_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00175 SOQV01000001.1 Protein Homology CDS 42106 42327 . + 0 ID=cds-TMR85653.1;Parent=gene-E3V42_00175;Dbxref=NCBI_GP:TMR85653.1;Name=TMR85653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446558.1;locus_tag=E3V42_00175;product=DUF910 family protein;protein_id=TMR85653.1;transl_table=11 SOQV01000001.1 Genbank gene 42327 42707 . + . ID=gene-E3V42_00180;Name=E3V42_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00180 SOQV01000001.1 Protein Homology CDS 42327 42707 . + 0 ID=cds-TMR85654.1;Parent=gene-E3V42_00180;Dbxref=NCBI_GP:TMR85654.1;Name=TMR85654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358189.1;locus_tag=E3V42_00180;product=rhodanese-like domain-containing protein;protein_id=TMR85654.1;transl_table=11 SOQV01000001.1 Genbank gene 42794 43027 . + . ID=gene-E3V42_00185;Name=E3V42_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00185 SOQV01000001.1 Protein Homology CDS 42794 43027 . + 0 ID=cds-TMR85655.1;Parent=gene-E3V42_00185;Dbxref=NCBI_GP:TMR85655.1;Name=TMR85655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088017.1;locus_tag=E3V42_00185;product=DUF4190 domain-containing protein;protein_id=TMR85655.1;transl_table=11 SOQV01000001.1 Genbank gene 43069 43794 . - . ID=gene-E3V42_00190;Name=E3V42_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00190 SOQV01000001.1 Protein Homology CDS 43069 43794 . - 0 ID=cds-TMR85656.1;Parent=gene-E3V42_00190;Dbxref=NCBI_GP:TMR85656.1;Name=TMR85656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358191.1;locus_tag=E3V42_00190;product=rRNA pseudouridine synthase;protein_id=TMR85656.1;transl_table=11 SOQV01000001.1 Genbank gene 43956 45797 . + . ID=gene-E3V42_00195;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=E3V42_00195 SOQV01000001.1 Protein Homology CDS 43956 45797 . + 0 ID=cds-TMR85657.1;Parent=gene-E3V42_00195;Dbxref=NCBI_GP:TMR85657.1;Name=TMR85657.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446555.1;locus_tag=E3V42_00195;product=translational GTPase TypA;protein_id=TMR85657.1;transl_table=11 SOQV01000001.1 Genbank gene 45817 46071 . + . ID=gene-E3V42_00200;Name=E3V42_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00200 SOQV01000001.1 Protein Homology CDS 45817 46071 . + 0 ID=cds-TMR85658.1;Parent=gene-E3V42_00200;Dbxref=NCBI_GP:TMR85658.1;Name=TMR85658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358193.1;locus_tag=E3V42_00200;product=DUF3165 family protein;protein_id=TMR85658.1;transl_table=11 SOQV01000001.1 Genbank gene 46339 47505 . - . ID=gene-E3V42_00205;Name=E3V42_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00205 SOQV01000001.1 Protein Homology CDS 46339 47505 . - 0 ID=cds-TMR85659.1;Parent=gene-E3V42_00205;Dbxref=NCBI_GP:TMR85659.1;Name=TMR85659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704683.1;locus_tag=E3V42_00205;product=site-specific integrase;protein_id=TMR85659.1;transl_table=11 SOQV01000001.1 Genbank pseudogene 47504 47690 . + . ID=gene-E3V42_00210;Name=E3V42_00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00210;pseudo=true SOQV01000001.1 Protein Homology CDS 47504 47690 . + 0 ID=cds-E3V42_00210;Parent=gene-E3V42_00210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243484.1;locus_tag=E3V42_00210;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000001.1 Genbank gene 47660 48127 . - . ID=gene-E3V42_00215;Name=E3V42_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00215 SOQV01000001.1 Protein Homology CDS 47660 48127 . - 0 ID=cds-TMR85660.1;Parent=gene-E3V42_00215;Dbxref=NCBI_GP:TMR85660.1;Name=TMR85660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080839.1;locus_tag=E3V42_00215;product=XRE family transcriptional regulator;protein_id=TMR85660.1;transl_table=11 SOQV01000001.1 Genbank gene 48285 48473 . + . ID=gene-E3V42_00220;Name=E3V42_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00220 SOQV01000001.1 Protein Homology CDS 48285 48473 . + 0 ID=cds-TMR85661.1;Parent=gene-E3V42_00220;Dbxref=NCBI_GP:TMR85661.1;Name=TMR85661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000909238.1;locus_tag=E3V42_00220;product=XRE family transcriptional regulator;protein_id=TMR85661.1;transl_table=11 SOQV01000001.1 Genbank gene 48641 48949 . + . ID=gene-E3V42_00225;Name=E3V42_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00225 SOQV01000001.1 Protein Homology CDS 48641 48949 . + 0 ID=cds-TMR85662.1;Parent=gene-E3V42_00225;Dbxref=NCBI_GP:TMR85662.1;Name=TMR85662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060826.1;locus_tag=E3V42_00225;product=hypothetical protein;protein_id=TMR85662.1;transl_table=11 SOQV01000001.1 Genbank gene 49064 49492 . + . ID=gene-E3V42_00230;Name=E3V42_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00230 SOQV01000001.1 Protein Homology CDS 49064 49492 . + 0 ID=cds-TMR85663.1;Parent=gene-E3V42_00230;Dbxref=NCBI_GP:TMR85663.1;Name=TMR85663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516652.1;locus_tag=E3V42_00230;product=hypothetical protein;protein_id=TMR85663.1;transl_table=11 SOQV01000001.1 Genbank gene 49857 50306 . + . ID=gene-E3V42_00235;Name=E3V42_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00235 SOQV01000001.1 Protein Homology CDS 49857 50306 . + 0 ID=cds-TMR85664.1;Parent=gene-E3V42_00235;Dbxref=NCBI_GP:TMR85664.1;Name=TMR85664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447108.1;locus_tag=E3V42_00235;product=hypothetical protein;protein_id=TMR85664.1;transl_table=11 SOQV01000001.1 Genbank gene 50303 50518 . + . ID=gene-E3V42_00240;Name=E3V42_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00240 SOQV01000001.1 Protein Homology CDS 50303 50518 . + 0 ID=cds-TMR85665.1;Parent=gene-E3V42_00240;Dbxref=NCBI_GP:TMR85665.1;Name=TMR85665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447106.1;locus_tag=E3V42_00240;product=hypothetical protein;protein_id=TMR85665.1;transl_table=11 SOQV01000001.1 Genbank gene 50515 50772 . + . ID=gene-E3V42_00245;Name=E3V42_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00245 SOQV01000001.1 Protein Homology CDS 50515 50772 . + 0 ID=cds-TMR85666.1;Parent=gene-E3V42_00245;Dbxref=NCBI_GP:TMR85666.1;Name=TMR85666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447105.1;locus_tag=E3V42_00245;product=hypothetical protein;protein_id=TMR85666.1;transl_table=11 SOQV01000001.1 Genbank gene 50787 51059 . + . ID=gene-E3V42_00250;Name=E3V42_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00250 SOQV01000001.1 Protein Homology CDS 50787 51059 . + 0 ID=cds-TMR85667.1;Parent=gene-E3V42_00250;Dbxref=NCBI_GP:TMR85667.1;Name=TMR85667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492129.1;locus_tag=E3V42_00250;product=hypothetical protein;protein_id=TMR85667.1;transl_table=11 SOQV01000001.1 Genbank gene 51056 51571 . + . ID=gene-E3V42_00255;Name=E3V42_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00255 SOQV01000001.1 Protein Homology CDS 51056 51571 . + 0 ID=cds-TMR85668.1;Parent=gene-E3V42_00255;Dbxref=NCBI_GP:TMR85668.1;Name=TMR85668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263812.1;locus_tag=E3V42_00255;product=hypothetical protein;protein_id=TMR85668.1;transl_table=11 SOQV01000001.1 Genbank gene 51564 52958 . + . ID=gene-E3V42_00260;Name=E3V42_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00260 SOQV01000001.1 Protein Homology CDS 51564 52958 . + 0 ID=cds-TMR85669.1;Parent=gene-E3V42_00260;Dbxref=NCBI_GP:TMR85669.1;Name=TMR85669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083579.1;locus_tag=E3V42_00260;product=virulence-associated protein E;protein_id=TMR85669.1;transl_table=11 ##sequence-region SOQV01000010.1 1 25828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000010.1 Genbank region 1 25828 . + . ID=SOQV01000010.1:1..25828;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000010.1 Genbank pseudogene 1 244 . - . ID=gene-E3V42_00870;Name=E3V42_00870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00870;pseudo=true SOQV01000010.1 Protein Homology CDS 1 244 . - 0 ID=cds-E3V42_00870;Parent=gene-E3V42_00870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358042.1;locus_tag=E3V42_00870;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 SOQV01000010.1 Genbank gene 618 767 . - . ID=gene-E3V42_00875;Name=E3V42_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00875 SOQV01000010.1 Protein Homology CDS 618 767 . - 0 ID=cds-TMR85416.1;Parent=gene-E3V42_00875;Dbxref=NCBI_GP:TMR85416.1;Name=TMR85416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410533.1;locus_tag=E3V42_00875;product=cell envelope;protein_id=TMR85416.1;transl_table=11 SOQV01000010.1 Genbank gene 732 851 . + . ID=gene-E3V42_00880;Name=E3V42_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00880 SOQV01000010.1 Protein Homology CDS 732 851 . + 0 ID=cds-TMR85417.1;Parent=gene-E3V42_00880;Dbxref=NCBI_GP:TMR85417.1;Name=TMR85417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808898.1;locus_tag=E3V42_00880;product=glutamine synthetase;protein_id=TMR85417.1;transl_table=11 SOQV01000010.1 Genbank gene 947 2293 . - . ID=gene-E3V42_00885;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=E3V42_00885 SOQV01000010.1 Protein Homology CDS 947 2293 . - 0 ID=cds-TMR85418.1;Parent=gene-E3V42_00885;Dbxref=NCBI_GP:TMR85418.1;Name=TMR85418.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358038.1;locus_tag=E3V42_00885;product=type I glutamate--ammonia ligase;protein_id=TMR85418.1;transl_table=11 SOQV01000010.1 Genbank gene 2330 2686 . - . ID=gene-E3V42_00890;Name=E3V42_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00890 SOQV01000010.1 Protein Homology CDS 2330 2686 . - 0 ID=cds-TMR85419.1;Parent=gene-E3V42_00890;Dbxref=NCBI_GP:TMR85419.1;Name=TMR85419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358037.1;locus_tag=E3V42_00890;product=MerR family transcriptional regulator;protein_id=TMR85419.1;transl_table=11 SOQV01000010.1 Genbank gene 2763 3290 . - . ID=gene-E3V42_00895;Name=E3V42_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00895 SOQV01000010.1 Protein Homology CDS 2763 3290 . - 0 ID=cds-TMR85420.1;Parent=gene-E3V42_00895;Dbxref=NCBI_GP:TMR85420.1;Name=TMR85420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445486.1;locus_tag=E3V42_00895;product=aromatic acid exporter family protein;protein_id=TMR85420.1;transl_table=11 SOQV01000010.1 Genbank pseudogene 3472 3637 . + . ID=gene-E3V42_00900;Name=E3V42_00900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00900;pseudo=true SOQV01000010.1 Protein Homology CDS 3472 3637 . + 0 ID=cds-E3V42_00900;Parent=gene-E3V42_00900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_00900;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000010.1 Genbank gene 3719 4915 . - . ID=gene-E3V42_00905;Name=E3V42_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00905 SOQV01000010.1 Protein Homology CDS 3719 4915 . - 0 ID=cds-TMR85421.1;Parent=gene-E3V42_00905;Dbxref=NCBI_GP:TMR85421.1;Name=TMR85421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=E3V42_00905;product=phosphoglycerate kinase;protein_id=TMR85421.1;transl_table=11 SOQV01000010.1 Genbank gene 5005 10020 . - . ID=gene-E3V42_00910;Name=E3V42_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00910 SOQV01000010.1 Protein Homology CDS 5005 10020 . - 0 ID=cds-TMR85422.1;Parent=gene-E3V42_00910;Dbxref=NCBI_GP:TMR85422.1;Name=TMR85422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445484.1;locus_tag=E3V42_00910;product=YSIRK-type signal peptide-containing protein;protein_id=TMR85422.1;transl_table=11 SOQV01000010.1 Genbank pseudogene 10314 11096 . + . ID=gene-E3V42_00915;Name=E3V42_00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00915;pseudo=true SOQV01000010.1 Protein Homology CDS 10314 11096 . + 0 ID=cds-E3V42_00915;Parent=gene-E3V42_00915;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001852504.1;locus_tag=E3V42_00915;product=Na/Pi cotransporter family protein;pseudo=true;transl_table=11 SOQV01000010.1 Genbank pseudogene 11358 11945 . + . ID=gene-E3V42_00920;Name=E3V42_00920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00920;pseudo=true SOQV01000010.1 Protein Homology CDS 11358 11945 . + 0 ID=cds-E3V42_00920;Parent=gene-E3V42_00920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550058.1;locus_tag=E3V42_00920;product=Na/Pi cotransporter family protein;pseudo=true;transl_table=11 SOQV01000010.1 Genbank gene 12504 14111 . - . ID=gene-E3V42_00925;Name=E3V42_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00925 SOQV01000010.1 Protein Homology CDS 12504 14111 . - 0 ID=cds-TMR85423.1;Parent=gene-E3V42_00925;Dbxref=NCBI_GP:TMR85423.1;Name=TMR85423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358032.1;locus_tag=E3V42_00925;product=CTP synthase;protein_id=TMR85423.1;transl_table=11 SOQV01000010.1 Genbank gene 14501 15100 . - . ID=gene-E3V42_00930;Name=E3V42_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00930 SOQV01000010.1 Protein Homology CDS 14501 15100 . - 0 ID=cds-TMR85424.1;Parent=gene-E3V42_00930;Dbxref=NCBI_GP:TMR85424.1;Name=TMR85424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445540.1;locus_tag=E3V42_00930;product=DNA-directed RNA polymerase subunit delta;protein_id=TMR85424.1;transl_table=11 SOQV01000010.1 Genbank gene 15213 15692 . - . ID=gene-E3V42_00935;Name=E3V42_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00935 SOQV01000010.1 Protein Homology CDS 15213 15692 . - 0 ID=cds-TMR85425.1;Parent=gene-E3V42_00935;Dbxref=NCBI_GP:TMR85425.1;Name=TMR85425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446904.1;locus_tag=E3V42_00935;product=GNAT family N-acetyltransferase;protein_id=TMR85425.1;transl_table=11 SOQV01000010.1 Genbank gene 15667 16086 . - . ID=gene-E3V42_00940;Name=E3V42_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00940 SOQV01000010.1 Protein Homology CDS 15667 16086 . - 0 ID=cds-TMR85426.1;Parent=gene-E3V42_00940;Dbxref=NCBI_GP:TMR85426.1;Name=TMR85426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446905.1;locus_tag=E3V42_00940;product=chromosome partitioning protein ParB;protein_id=TMR85426.1;transl_table=11 SOQV01000010.1 Genbank gene 16114 16764 . - . ID=gene-E3V42_00945;Name=E3V42_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00945 SOQV01000010.1 Protein Homology CDS 16114 16764 . - 0 ID=cds-TMR85427.1;Parent=gene-E3V42_00945;Dbxref=NCBI_GP:TMR85427.1;Name=TMR85427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358028.1;locus_tag=E3V42_00945;product=phosphatase PAP2 family protein;protein_id=TMR85427.1;transl_table=11 SOQV01000010.1 Genbank gene 16754 17317 . - . ID=gene-E3V42_00950;Name=E3V42_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00950 SOQV01000010.1 Protein Homology CDS 16754 17317 . - 0 ID=cds-TMR85428.1;Parent=gene-E3V42_00950;Dbxref=NCBI_GP:TMR85428.1;Name=TMR85428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446907.1;locus_tag=E3V42_00950;product=ECF transporter S component;protein_id=TMR85428.1;transl_table=11 SOQV01000010.1 cmsearch riboswitch 17481 17699 . - . ID=id-SOQV01000010.1:17481..17699;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000010.1 Genbank gene 17753 18256 . - . ID=gene-E3V42_00955;Name=E3V42_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00955 SOQV01000010.1 Protein Homology CDS 17753 18256 . - 0 ID=cds-TMR85429.1;Parent=gene-E3V42_00955;Dbxref=NCBI_GP:TMR85429.1;Name=TMR85429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446908.1;locus_tag=E3V42_00955;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=TMR85429.1;transl_table=11 SOQV01000010.1 Genbank gene 18449 19279 . - . ID=gene-E3V42_00960;Name=E3V42_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00960 SOQV01000010.1 Protein Homology CDS 18449 19279 . - 0 ID=cds-TMR85430.1;Parent=gene-E3V42_00960;Dbxref=NCBI_GP:TMR85430.1;Name=TMR85430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446909.1;locus_tag=E3V42_00960;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TMR85430.1;transl_table=11 SOQV01000010.1 Genbank gene 19264 20943 . - . ID=gene-E3V42_00965;Name=E3V42_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00965 SOQV01000010.1 Protein Homology CDS 19264 20943 . - 0 ID=cds-TMR85431.1;Parent=gene-E3V42_00965;Dbxref=NCBI_GP:TMR85431.1;Name=TMR85431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358024.1;locus_tag=E3V42_00965;product=ABC transporter ATP-binding protein;protein_id=TMR85431.1;transl_table=11 SOQV01000010.1 Genbank gene 21227 21772 . - . ID=gene-E3V42_00970;Name=E3V42_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00970 SOQV01000010.1 Protein Homology CDS 21227 21772 . - 0 ID=cds-TMR85432.1;Parent=gene-E3V42_00970;Dbxref=NCBI_GP:TMR85432.1;Name=TMR85432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358023.1;locus_tag=E3V42_00970;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=TMR85432.1;transl_table=11 SOQV01000010.1 Genbank gene 21788 22636 . - . ID=gene-E3V42_00975;Name=E3V42_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00975 SOQV01000010.1 Protein Homology CDS 21788 22636 . - 0 ID=cds-TMR85433.1;Parent=gene-E3V42_00975;Dbxref=NCBI_GP:TMR85433.1;Name=TMR85433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446912.1;locus_tag=E3V42_00975;product=DNA-directed RNA polymerase subunit delta;protein_id=TMR85433.1;transl_table=11 SOQV01000010.1 Genbank gene 22823 24172 . + . ID=gene-E3V42_00980;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=E3V42_00980 SOQV01000010.1 Protein Homology CDS 22823 24172 . + 0 ID=cds-TMR85434.1;Parent=gene-E3V42_00980;Dbxref=NCBI_GP:TMR85434.1;Name=TMR85434.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446913.1;locus_tag=E3V42_00980;product=Trk system potassium transporter TrkA;protein_id=TMR85434.1;transl_table=11 SOQV01000010.1 Genbank pseudogene 24176 25363 . + . ID=gene-E3V42_00985;Name=E3V42_00985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00985;pseudo=true SOQV01000010.1 Protein Homology CDS 24176 25363 . + 0 ID=cds-E3V42_00985;Parent=gene-E3V42_00985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358020.1;locus_tag=E3V42_00985;product=TrkH family potassium uptake protein;pseudo=true;transl_table=11 ##sequence-region SOQV01000100.1 1 4277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000100.1 Genbank region 1 4277 . + . ID=SOQV01000100.1:1..4277;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000100.1 Genbank gene 1 307 . + . ID=gene-E3V42_10580;Name=E3V42_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10580;partial=true;start_range=.,1 SOQV01000100.1 Protein Homology CDS 1 307 . + 1 ID=cds-TMR82290.1;Parent=gene-E3V42_10580;Dbxref=NCBI_GP:TMR82290.1;Name=TMR82290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093621.1;locus_tag=E3V42_10580;partial=true;product=XRE family transcriptional regulator;protein_id=TMR82290.1;start_range=.,1;transl_table=11 SOQV01000100.1 Genbank gene 555 1196 . - . ID=gene-E3V42_10585;Name=E3V42_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10585 SOQV01000100.1 Protein Homology CDS 555 1196 . - 0 ID=cds-TMR82291.1;Parent=gene-E3V42_10585;Dbxref=NCBI_GP:TMR82291.1;Name=TMR82291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087002.1;locus_tag=E3V42_10585;product=ABC transporter ATP-binding protein;protein_id=TMR82291.1;transl_table=11 SOQV01000100.1 Genbank gene 1201 3402 . - . ID=gene-E3V42_10590;Name=E3V42_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10590 SOQV01000100.1 Protein Homology CDS 1201 3402 . - 0 ID=cds-TMR82292.1;Parent=gene-E3V42_10590;Dbxref=NCBI_GP:TMR82292.1;Name=TMR82292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221426.1;locus_tag=E3V42_10590;product=ABC transporter permease;protein_id=TMR82292.1;transl_table=11 SOQV01000100.1 Genbank gene 3409 3702 . - . ID=gene-E3V42_10595;Name=E3V42_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10595 SOQV01000100.1 Protein Homology CDS 3409 3702 . - 0 ID=cds-TMR82293.1;Parent=gene-E3V42_10595;Dbxref=NCBI_GP:TMR82293.1;Name=TMR82293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748217.1;locus_tag=E3V42_10595;product=hypothetical protein;protein_id=TMR82293.1;transl_table=11 ##sequence-region SOQV01000101.1 1 24324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000101.1 Genbank region 1 24324 . + . ID=SOQV01000101.1:1..24324;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000101.1 Genbank pseudogene 451 528 . - . ID=gene-E3V42_10600;Name=E3V42_10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10600;pseudo=true SOQV01000101.1 Protein Homology CDS 451 528 . - 0 ID=cds-E3V42_10600;Parent=gene-E3V42_10600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397737.1;locus_tag=E3V42_10600;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQV01000101.1 Genbank gene 604 2217 . - . ID=gene-E3V42_10605;Name=E3V42_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10605 SOQV01000101.1 Protein Homology CDS 604 2217 . - 0 ID=cds-TMR82176.1;Parent=gene-E3V42_10605;Dbxref=NCBI_GP:TMR82176.1;Name=TMR82176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359176.1;locus_tag=E3V42_10605;product=ribonuclease Y;protein_id=TMR82176.1;transl_table=11 SOQV01000101.1 Genbank gene 2269 2589 . - . ID=gene-E3V42_10610;Name=E3V42_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10610 SOQV01000101.1 Protein Homology CDS 2269 2589 . - 0 ID=cds-TMR82205.1;Parent=gene-E3V42_10610;Dbxref=NCBI_GP:TMR82205.1;Name=TMR82205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451507.1;locus_tag=E3V42_10610;product=recombinase;protein_id=TMR82205.1;transl_table=11 SOQV01000101.1 Genbank gene 2690 3475 . - . ID=gene-E3V42_10615;Name=E3V42_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10615 SOQV01000101.1 Protein Homology CDS 2690 3475 . - 0 ID=cds-TMR82177.1;Parent=gene-E3V42_10615;Dbxref=NCBI_GP:TMR82177.1;Name=TMR82177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669600.1;locus_tag=E3V42_10615;product=hypothetical protein;protein_id=TMR82177.1;transl_table=11 SOQV01000101.1 Genbank pseudogene 3573 4073 . - . ID=gene-E3V42_10620;Name=E3V42_10620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10620;pseudo=true SOQV01000101.1 Protein Homology CDS 3573 4073 . - 0 ID=cds-E3V42_10620;Parent=gene-E3V42_10620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004832657.1;locus_tag=E3V42_10620;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000101.1 Genbank gene 4085 4219 . - . ID=gene-E3V42_10625;Name=E3V42_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10625 SOQV01000101.1 Protein Homology CDS 4085 4219 . - 0 ID=cds-TMR82178.1;Parent=gene-E3V42_10625;Dbxref=NCBI_GP:TMR82178.1;Name=TMR82178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001815749.1;locus_tag=E3V42_10625;product=restriction endonuclease;protein_id=TMR82178.1;transl_table=11 SOQV01000101.1 Genbank gene 4435 4689 . - . ID=gene-E3V42_10630;Name=E3V42_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10630 SOQV01000101.1 Protein Homology CDS 4435 4689 . - 0 ID=cds-TMR82179.1;Parent=gene-E3V42_10630;Dbxref=NCBI_GP:TMR82179.1;Name=TMR82179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359177.1;locus_tag=E3V42_10630;product=Txe/YoeB family addiction module toxin;protein_id=TMR82179.1;transl_table=11 SOQV01000101.1 Genbank gene 4693 4986 . - . ID=gene-E3V42_10635;Name=E3V42_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10635 SOQV01000101.1 Protein Homology CDS 4693 4986 . - 0 ID=cds-TMR82180.1;Parent=gene-E3V42_10635;Dbxref=NCBI_GP:TMR82180.1;Name=TMR82180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359178.1;locus_tag=E3V42_10635;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=TMR82180.1;transl_table=11 SOQV01000101.1 Genbank pseudogene 5047 5121 . + . ID=gene-E3V42_10640;Name=E3V42_10640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10640;pseudo=true SOQV01000101.1 Protein Homology CDS 5047 5121 . + 0 ID=cds-E3V42_10640;Parent=gene-E3V42_10640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_10640;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000101.1 Genbank gene 5276 6373 . - . ID=gene-E3V42_10645;Name=E3V42_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10645 SOQV01000101.1 Protein Homology CDS 5276 6373 . - 0 ID=cds-TMR82181.1;Parent=gene-E3V42_10645;Dbxref=NCBI_GP:TMR82181.1;Name=TMR82181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359179.1;locus_tag=E3V42_10645;product=nucleotidyltransferase;protein_id=TMR82181.1;transl_table=11 SOQV01000101.1 Genbank gene 6383 7129 . - . ID=gene-E3V42_10650;Name=E3V42_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10650 SOQV01000101.1 Protein Homology CDS 6383 7129 . - 0 ID=cds-TMR82182.1;Parent=gene-E3V42_10650;Dbxref=NCBI_GP:TMR82182.1;Name=TMR82182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359180.1;locus_tag=E3V42_10650;product=class I SAM-dependent methyltransferase;protein_id=TMR82182.1;transl_table=11 SOQV01000101.1 Genbank gene 7234 7587 . - . ID=gene-E3V42_10655;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=E3V42_10655 SOQV01000101.1 Protein Homology CDS 7234 7587 . - 0 ID=cds-TMR82183.1;Parent=gene-E3V42_10655;Dbxref=NCBI_GP:TMR82183.1;Name=TMR82183.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359181.1;locus_tag=E3V42_10655;product=ribosome silencing factor;protein_id=TMR82183.1;transl_table=11 SOQV01000101.1 Genbank gene 7600 8100 . - . ID=gene-E3V42_10660;Name=E3V42_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10660 SOQV01000101.1 Protein Homology CDS 7600 8100 . - 0 ID=cds-TMR82184.1;Parent=gene-E3V42_10660;Dbxref=NCBI_GP:TMR82184.1;Name=TMR82184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359182.1;locus_tag=E3V42_10660;product=cysteine hydrolase;protein_id=TMR82184.1;transl_table=11 SOQV01000101.1 Genbank gene 8101 8694 . - . ID=gene-E3V42_10665;Name=E3V42_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10665 SOQV01000101.1 Protein Homology CDS 8101 8694 . - 0 ID=cds-TMR82185.1;Parent=gene-E3V42_10665;Dbxref=NCBI_GP:TMR82185.1;Name=TMR82185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359183.1;locus_tag=E3V42_10665;product=HD domain-containing protein;protein_id=TMR82185.1;transl_table=11 SOQV01000101.1 Genbank gene 8694 9323 . - . ID=gene-E3V42_10670;Name=E3V42_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10670 SOQV01000101.1 Protein Homology CDS 8694 9323 . - 0 ID=cds-TMR82186.1;Parent=gene-E3V42_10670;Dbxref=NCBI_GP:TMR82186.1;Name=TMR82186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359184.1;locus_tag=E3V42_10670;product=nicotinate-nucleotide adenylyltransferase;protein_id=TMR82186.1;transl_table=11 SOQV01000101.1 Genbank gene 9375 9686 . - . ID=gene-E3V42_10675;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=E3V42_10675 SOQV01000101.1 Protein Homology CDS 9375 9686 . - 0 ID=cds-TMR82187.1;Parent=gene-E3V42_10675;Dbxref=NCBI_GP:TMR82187.1;Name=TMR82187.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359185.1;locus_tag=E3V42_10675;product=ribosome assembly RNA-binding protein YhbY;protein_id=TMR82187.1;transl_table=11 SOQV01000101.1 Genbank gene 9899 11005 . - . ID=gene-E3V42_10680;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=E3V42_10680 SOQV01000101.1 Protein Homology CDS 9899 11005 . - 0 ID=cds-TMR82188.1;Parent=gene-E3V42_10680;Dbxref=NCBI_GP:TMR82188.1;Name=TMR82188.1;gbkey=CDS;gene=yqeH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446741.1;locus_tag=E3V42_10680;product=ribosome biogenesis GTPase YqeH;protein_id=TMR82188.1;transl_table=11 SOQV01000101.1 Genbank gene 11008 11598 . - . ID=gene-E3V42_10685;Name=E3V42_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10685 SOQV01000101.1 Protein Homology CDS 11008 11598 . - 0 ID=cds-TMR82189.1;Parent=gene-E3V42_10685;Dbxref=NCBI_GP:TMR82189.1;Name=TMR82189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359187.1;locus_tag=E3V42_10685;product=YqeG family HAD IIIA-type phosphatase;protein_id=TMR82189.1;transl_table=11 SOQV01000101.1 Genbank gene 11550 12458 . - . ID=gene-E3V42_10690;Name=E3V42_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10690 SOQV01000101.1 Protein Homology CDS 11550 12458 . - 0 ID=cds-TMR82190.1;Parent=gene-E3V42_10690;Dbxref=NCBI_GP:TMR82190.1;Name=TMR82190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359188.1;locus_tag=E3V42_10690;product=magnesium transporter CorA family protein;protein_id=TMR82190.1;transl_table=11 SOQV01000101.1 Genbank gene 12516 13121 . - . ID=gene-E3V42_10695;Name=E3V42_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10695 SOQV01000101.1 Protein Homology CDS 12516 13121 . - 0 ID=cds-TMR82191.1;Parent=gene-E3V42_10695;Dbxref=NCBI_GP:TMR82191.1;Name=TMR82191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359189.1;locus_tag=E3V42_10695;product=mechanosensitive ion channel family protein;protein_id=TMR82191.1;transl_table=11 SOQV01000101.1 Genbank gene 13215 14420 . + . ID=gene-E3V42_10700;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=E3V42_10700 SOQV01000101.1 Protein Homology CDS 13215 14420 . + 0 ID=cds-TMR82192.1;Parent=gene-E3V42_10700;Dbxref=NCBI_GP:TMR82192.1;Name=TMR82192.1;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446745.1;locus_tag=E3V42_10700;product=serine/threonine transporter SstT;protein_id=TMR82192.1;transl_table=11 SOQV01000101.1 Genbank gene 14488 15456 . + . ID=gene-E3V42_10705;Name=E3V42_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10705 SOQV01000101.1 Protein Homology CDS 14488 15456 . + 0 ID=cds-TMR82193.1;Parent=gene-E3V42_10705;Dbxref=NCBI_GP:TMR82193.1;Name=TMR82193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028167.1;locus_tag=E3V42_10705;product=aromatic acid exporter family protein;protein_id=TMR82193.1;transl_table=11 SOQV01000101.1 Genbank gene 15583 15963 . + . ID=gene-E3V42_10710;Name=E3V42_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10710 SOQV01000101.1 Protein Homology CDS 15583 15963 . + 0 ID=cds-TMR82194.1;Parent=gene-E3V42_10710;Dbxref=NCBI_GP:TMR82194.1;Name=TMR82194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221621.1;locus_tag=E3V42_10710;product=MarR family transcriptional regulator;protein_id=TMR82194.1;transl_table=11 SOQV01000101.1 Genbank gene 16061 16282 . + . ID=gene-E3V42_10715;Name=E3V42_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10715 SOQV01000101.1 Protein Homology CDS 16061 16282 . + 0 ID=cds-TMR82195.1;Parent=gene-E3V42_10715;Dbxref=NCBI_GP:TMR82195.1;Name=TMR82195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445691.1;locus_tag=E3V42_10715;product=DUF4649 family protein;protein_id=TMR82195.1;transl_table=11 SOQV01000101.1 Genbank gene 16299 16613 . + . ID=gene-E3V42_10720;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=E3V42_10720 SOQV01000101.1 Protein Homology CDS 16299 16613 . + 0 ID=cds-TMR82196.1;Parent=gene-E3V42_10720;Dbxref=NCBI_GP:TMR82196.1;Name=TMR82196.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445690.1;locus_tag=E3V42_10720;product=thioredoxin;protein_id=TMR82196.1;transl_table=11 SOQV01000101.1 Genbank gene 16815 17468 . + . ID=gene-E3V42_10725;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=E3V42_10725 SOQV01000101.1 Protein Homology CDS 16815 17468 . + 0 ID=cds-TMR82197.1;Parent=gene-E3V42_10725;Dbxref=NCBI_GP:TMR82197.1;Name=TMR82197.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445689.1;locus_tag=E3V42_10725;product=7-cyano-7-deazaguanine synthase QueC;protein_id=TMR82197.1;transl_table=11 SOQV01000101.1 Genbank gene 17468 17911 . + . ID=gene-E3V42_10730;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=E3V42_10730 SOQV01000101.1 Protein Homology CDS 17468 17911 . + 0 ID=cds-TMR82198.1;Parent=gene-E3V42_10730;Dbxref=NCBI_GP:TMR82198.1;Name=TMR82198.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445688.1;locus_tag=E3V42_10730;product=6-carboxytetrahydropterin synthase QueD;protein_id=TMR82198.1;transl_table=11 SOQV01000101.1 Genbank gene 17904 18620 . + . ID=gene-E3V42_10735;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=E3V42_10735 SOQV01000101.1 Protein Homology CDS 17904 18620 . + 0 ID=cds-TMR82199.1;Parent=gene-E3V42_10735;Dbxref=NCBI_GP:TMR82199.1;Name=TMR82199.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445687.1;locus_tag=E3V42_10735;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=TMR82199.1;transl_table=11 SOQV01000101.1 Genbank gene 18639 19130 . + . ID=gene-E3V42_10740;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=E3V42_10740 SOQV01000101.1 Protein Homology CDS 18639 19130 . + 0 ID=cds-TMR82200.1;Parent=gene-E3V42_10740;Dbxref=NCBI_GP:TMR82200.1;Name=TMR82200.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445686.1;locus_tag=E3V42_10740;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=TMR82200.1;transl_table=11 SOQV01000101.1 Genbank gene 19303 19971 . - . ID=gene-E3V42_10745;Name=E3V42_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10745 SOQV01000101.1 Protein Homology CDS 19303 19971 . - 0 ID=cds-TMR82201.1;Parent=gene-E3V42_10745;Dbxref=NCBI_GP:TMR82201.1;Name=TMR82201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445685.1;locus_tag=E3V42_10745;product=aquaporin;protein_id=TMR82201.1;transl_table=11 SOQV01000101.1 Genbank gene 20081 20872 . - . ID=gene-E3V42_10750;Name=E3V42_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10750 SOQV01000101.1 Protein Homology CDS 20081 20872 . - 0 ID=cds-TMR82202.1;Parent=gene-E3V42_10750;Dbxref=NCBI_GP:TMR82202.1;Name=TMR82202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445683.1;locus_tag=E3V42_10750;product=DUF2785 domain-containing protein;protein_id=TMR82202.1;transl_table=11 SOQV01000101.1 Genbank gene 21107 21556 . - . ID=gene-E3V42_10755;Name=E3V42_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10755 SOQV01000101.1 Protein Homology CDS 21107 21556 . - 0 ID=cds-TMR82203.1;Parent=gene-E3V42_10755;Dbxref=NCBI_GP:TMR82203.1;Name=TMR82203.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_10755;product=transposase;protein_id=TMR82203.1;transl_table=11 SOQV01000101.1 Genbank gene 21750 22943 . - . ID=gene-E3V42_10760;Name=E3V42_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10760 SOQV01000101.1 Protein Homology CDS 21750 22943 . - 0 ID=cds-TMR82204.1;Parent=gene-E3V42_10760;Dbxref=NCBI_GP:TMR82204.1;Name=TMR82204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359300.1;locus_tag=E3V42_10760;product=O-antigen ligase family protein;protein_id=TMR82204.1;transl_table=11 SOQV01000101.1 Genbank pseudogene 23331 23567 . + . ID=gene-E3V42_10765;Name=E3V42_10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10765;pseudo=true SOQV01000101.1 Protein Homology CDS 23331 23567 . + 0 ID=cds-E3V42_10765;Parent=gene-E3V42_10765;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_10765;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000101.1 Genbank gene 23690 24324 . + . ID=gene-E3V42_10770;Name=E3V42_10770;end_range=24324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10770;partial=true SOQV01000101.1 Protein Homology CDS 23690 24324 . + 0 ID=cds-TMR82206.1;Parent=gene-E3V42_10770;Dbxref=NCBI_GP:TMR82206.1;Name=TMR82206.1;end_range=24324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_10770;partial=true;product=IS30 family transposase;protein_id=TMR82206.1;transl_table=11 ##sequence-region SOQV01000102.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000102.1 Genbank region 1 598 . + . ID=SOQV01000102.1:1..598;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000102.1 Genbank gene 1 60 . - . ID=gene-E3V42_10775;Name=E3V42_10775;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V42_10775;partial=true;start_range=.,1 SOQV01000102.1 Genbank rRNA 1 60 . - . ID=rna-E3V42_10775;Parent=gene-E3V42_10775;gbkey=rRNA;locus_tag=E3V42_10775;partial=true;product=16S ribosomal RNA;start_range=.,1 SOQV01000102.1 Genbank exon 1 60 . - . ID=exon-E3V42_10775-1;Parent=rna-E3V42_10775;gbkey=rRNA;locus_tag=E3V42_10775;partial=true;product=16S ribosomal RNA;start_range=.,1 SOQV01000102.1 Genbank gene 302 373 . - . ID=gene-E3V42_10780;Name=E3V42_10780;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_10780 SOQV01000102.1 tRNAscan-SE tRNA 302 373 . - . ID=rna-E3V42_10780;Parent=gene-E3V42_10780;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_10780;product=tRNA-Glu SOQV01000102.1 tRNAscan-SE exon 302 373 . - . ID=exon-E3V42_10780-1;Parent=rna-E3V42_10780;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_10780;product=tRNA-Glu ##sequence-region SOQV01000103.1 1 29872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000103.1 Genbank region 1 29872 . + . ID=SOQV01000103.1:1..29872;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000103.1 Genbank pseudogene 1 284 . - . ID=gene-E3V42_10785;Name=E3V42_10785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10785;pseudo=true SOQV01000103.1 Protein Homology CDS 1 284 . - 0 ID=cds-E3V42_10785;Parent=gene-E3V42_10785;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_10785;product=transposase family protein;pseudo=true;transl_table=11 SOQV01000103.1 Genbank pseudogene 321 1502 . - . ID=gene-E3V42_10790;Name=E3V42_10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10790;pseudo=true SOQV01000103.1 Protein Homology CDS 321 1502 . - 0 ID=cds-E3V42_10790;Parent=gene-E3V42_10790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358469.1;locus_tag=E3V42_10790;product=MFS transporter;pseudo=true;transl_table=11 SOQV01000103.1 Genbank gene 1489 2094 . - . ID=gene-E3V42_10795;Name=E3V42_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10795 SOQV01000103.1 Protein Homology CDS 1489 2094 . - 0 ID=cds-TMR82078.1;Parent=gene-E3V42_10795;Dbxref=NCBI_GP:TMR82078.1;Name=TMR82078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446084.1;locus_tag=E3V42_10795;product=dephospho-CoA kinase;protein_id=TMR82078.1;transl_table=11 SOQV01000103.1 Genbank gene 2094 2918 . - . ID=gene-E3V42_10800;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=E3V42_10800 SOQV01000103.1 Protein Homology CDS 2094 2918 . - 0 ID=cds-TMR82079.1;Parent=gene-E3V42_10800;Dbxref=NCBI_GP:TMR82079.1;Name=TMR82079.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446083.1;locus_tag=E3V42_10800;product=DNA-formamidopyrimidine glycosylase;protein_id=TMR82079.1;transl_table=11 SOQV01000103.1 Genbank gene 2967 3866 . - . ID=gene-E3V42_10805;Name=E3V42_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10805 SOQV01000103.1 Protein Homology CDS 2967 3866 . - 0 ID=cds-TMR82080.1;Parent=gene-E3V42_10805;Dbxref=NCBI_GP:TMR82080.1;Name=TMR82080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935752.1;locus_tag=E3V42_10805;product=GTPase Era;protein_id=TMR82080.1;transl_table=11 SOQV01000103.1 Genbank gene 3883 4278 . - . ID=gene-E3V42_10810;Name=E3V42_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10810 SOQV01000103.1 Protein Homology CDS 3883 4278 . - 0 ID=cds-TMR82081.1;Parent=gene-E3V42_10810;Dbxref=NCBI_GP:TMR82081.1;Name=TMR82081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358464.1;locus_tag=E3V42_10810;product=diacylglycerol kinase;protein_id=TMR82081.1;transl_table=11 SOQV01000103.1 Genbank gene 4259 4756 . - . ID=gene-E3V42_10815;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=E3V42_10815 SOQV01000103.1 Protein Homology CDS 4259 4756 . - 0 ID=cds-TMR82082.1;Parent=gene-E3V42_10815;Dbxref=NCBI_GP:TMR82082.1;Name=TMR82082.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=E3V42_10815;product=rRNA maturation RNase YbeY;protein_id=TMR82082.1;transl_table=11 SOQV01000103.1 Genbank gene 4861 6516 . + . ID=gene-E3V42_10820;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=E3V42_10820 SOQV01000103.1 Protein Homology CDS 4861 6516 . + 0 ID=cds-TMR82083.1;Parent=gene-E3V42_10820;Dbxref=NCBI_GP:TMR82083.1;Name=TMR82083.1;gbkey=CDS;gene=pavA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446079.1;locus_tag=E3V42_10820;product=fibronectin-binding protein PavA;protein_id=TMR82083.1;transl_table=11 SOQV01000103.1 Genbank gene 6577 8610 . - . ID=gene-E3V42_10825;Name=E3V42_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10825 SOQV01000103.1 Protein Homology CDS 6577 8610 . - 0 ID=cds-TMR82084.1;Parent=gene-E3V42_10825;Dbxref=NCBI_GP:TMR82084.1;Name=TMR82084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358461.1;locus_tag=E3V42_10825;product=endo-beta-N-acetylglucosaminidase;protein_id=TMR82084.1;transl_table=11 SOQV01000103.1 Genbank gene 8652 9590 . - . ID=gene-E3V42_10830;Name=E3V42_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10830 SOQV01000103.1 Protein Homology CDS 8652 9590 . - 0 ID=cds-TMR82085.1;Parent=gene-E3V42_10830;Dbxref=NCBI_GP:TMR82085.1;Name=TMR82085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358460.2;locus_tag=E3V42_10830;product=dihydroorotate dehydrogenase;protein_id=TMR82085.1;transl_table=11 SOQV01000103.1 Genbank gene 9601 10401 . - . ID=gene-E3V42_10835;Name=E3V42_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10835 SOQV01000103.1 Protein Homology CDS 9601 10401 . - 0 ID=cds-TMR82086.1;Parent=gene-E3V42_10835;Dbxref=NCBI_GP:TMR82086.1;Name=TMR82086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446076.1;locus_tag=E3V42_10835;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=TMR82086.1;transl_table=11 SOQV01000103.1 Genbank gene 10649 11029 . - . ID=gene-E3V42_10840;Name=E3V42_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10840 SOQV01000103.1 Protein Homology CDS 10649 11029 . - 0 ID=cds-TMR82087.1;Parent=gene-E3V42_10840;Dbxref=NCBI_GP:TMR82087.1;Name=TMR82087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446074.1;locus_tag=E3V42_10840;product=lactoylglutathione lyase;protein_id=TMR82087.1;transl_table=11 SOQV01000103.1 Genbank gene 11087 11446 . - . ID=gene-E3V42_10845;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=E3V42_10845 SOQV01000103.1 Protein Homology CDS 11087 11446 . - 0 ID=cds-TMR82088.1;Parent=gene-E3V42_10845;Dbxref=NCBI_GP:TMR82088.1;Name=TMR82088.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=E3V42_10845;product=50S ribosomal protein L20;protein_id=TMR82088.1;transl_table=11 SOQV01000103.1 Genbank gene 11498 11698 . - . ID=gene-E3V42_10850;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=E3V42_10850 SOQV01000103.1 Protein Homology CDS 11498 11698 . - 0 ID=cds-TMR82089.1;Parent=gene-E3V42_10850;Dbxref=NCBI_GP:TMR82089.1;Name=TMR82089.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=E3V42_10850;product=50S ribosomal protein L35;protein_id=TMR82089.1;transl_table=11 SOQV01000103.1 Genbank gene 11731 12288 . - . ID=gene-E3V42_10855;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=E3V42_10855 SOQV01000103.1 Protein Homology CDS 11731 12288 . - 0 ID=cds-TMR82090.1;Parent=gene-E3V42_10855;Dbxref=NCBI_GP:TMR82090.1;Name=TMR82090.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446071.1;locus_tag=E3V42_10855;product=translation initiation factor IF-3;protein_id=TMR82090.1;transl_table=11 SOQV01000103.1 Genbank gene 12572 13756 . - . ID=gene-E3V42_10860;Name=E3V42_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10860 SOQV01000103.1 Protein Homology CDS 12572 13756 . - 0 ID=cds-TMR82091.1;Parent=gene-E3V42_10860;Dbxref=NCBI_GP:TMR82091.1;Name=TMR82091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655960.1;locus_tag=E3V42_10860;product=hypothetical protein;protein_id=TMR82091.1;transl_table=11 SOQV01000103.1 Genbank gene 13753 14346 . - . ID=gene-E3V42_10865;Name=E3V42_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10865 SOQV01000103.1 Protein Homology CDS 13753 14346 . - 0 ID=cds-TMR82092.1;Parent=gene-E3V42_10865;Dbxref=NCBI_GP:TMR82092.1;Name=TMR82092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397557.1;locus_tag=E3V42_10865;product=ABC transporter ATP-binding protein;protein_id=TMR82092.1;transl_table=11 SOQV01000103.1 Genbank gene 14379 14597 . - . ID=gene-E3V42_10870;Name=E3V42_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10870 SOQV01000103.1 Protein Homology CDS 14379 14597 . - 0 ID=cds-TMR82104.1;Parent=gene-E3V42_10870;Dbxref=NCBI_GP:TMR82104.1;Name=TMR82104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813351.1;locus_tag=E3V42_10870;product=hypothetical protein;protein_id=TMR82104.1;transl_table=11 SOQV01000103.1 Genbank pseudogene 14743 15582 . - . ID=gene-E3V42_10875;Name=E3V42_10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10875;pseudo=true SOQV01000103.1 Protein Homology CDS 14743 15582 . - 0 ID=cds-E3V42_10875;Parent=gene-E3V42_10875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004897104.1;locus_tag=E3V42_10875;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000103.1 Genbank pseudogene 15620 15829 . + . ID=gene-E3V42_10880;Name=E3V42_10880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10880;pseudo=true SOQV01000103.1 Protein Homology CDS 15620 15829 . + 0 ID=cds-E3V42_10880;Parent=gene-E3V42_10880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446493.1;locus_tag=E3V42_10880;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 SOQV01000103.1 Genbank gene 15929 16186 . - . ID=gene-E3V42_10885;Name=E3V42_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10885 SOQV01000103.1 Protein Homology CDS 15929 16186 . - 0 ID=cds-TMR82093.1;Parent=gene-E3V42_10885;Dbxref=NCBI_GP:TMR82093.1;Name=TMR82093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446496.1;locus_tag=E3V42_10885;product=DUF896 family protein;protein_id=TMR82093.1;transl_table=11 SOQV01000103.1 Genbank gene 16228 18264 . - . ID=gene-E3V42_10890;Name=E3V42_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10890 SOQV01000103.1 Protein Homology CDS 16228 18264 . - 0 ID=cds-TMR82094.1;Parent=gene-E3V42_10890;Dbxref=NCBI_GP:TMR82094.1;Name=TMR82094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446497.1;locus_tag=E3V42_10890;product=glycine--tRNA ligase subunit beta;protein_id=TMR82094.1;transl_table=11 SOQV01000103.1 Genbank gene 18476 19393 . - . ID=gene-E3V42_10895;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=E3V42_10895 SOQV01000103.1 Protein Homology CDS 18476 19393 . - 0 ID=cds-TMR82095.1;Parent=gene-E3V42_10895;Dbxref=NCBI_GP:TMR82095.1;Name=TMR82095.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446498.1;locus_tag=E3V42_10895;product=glycine--tRNA ligase subunit alpha;protein_id=TMR82095.1;transl_table=11 SOQV01000103.1 Genbank gene 19761 20522 . - . ID=gene-E3V42_10900;Name=E3V42_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10900 SOQV01000103.1 Protein Homology CDS 19761 20522 . - 0 ID=cds-TMR82096.1;Parent=gene-E3V42_10900;Dbxref=NCBI_GP:TMR82096.1;Name=TMR82096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035812.1;locus_tag=E3V42_10900;product=elongation factor Tu;protein_id=TMR82096.1;transl_table=11 SOQV01000103.1 Genbank gene 20795 21637 . - . ID=gene-E3V42_10905;Name=E3V42_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10905 SOQV01000103.1 Protein Homology CDS 20795 21637 . - 0 ID=cds-TMR82097.1;Parent=gene-E3V42_10905;Dbxref=NCBI_GP:TMR82097.1;Name=TMR82097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358925.1;locus_tag=E3V42_10905;product=aldo/keto reductase;protein_id=TMR82097.1;transl_table=11 SOQV01000103.1 Genbank gene 21751 23142 . - . ID=gene-E3V42_10910;Name=E3V42_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10910 SOQV01000103.1 Protein Homology CDS 21751 23142 . - 0 ID=cds-TMR82098.1;Parent=gene-E3V42_10910;Dbxref=NCBI_GP:TMR82098.1;Name=TMR82098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358926.1;locus_tag=E3V42_10910;product=peptidoglycan GlcNAc deacetylase;protein_id=TMR82098.1;transl_table=11 SOQV01000103.1 Genbank gene 23377 23976 . - . ID=gene-E3V42_10915;Name=E3V42_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10915 SOQV01000103.1 Protein Homology CDS 23377 23976 . - 0 ID=cds-TMR82099.1;Parent=gene-E3V42_10915;Dbxref=NCBI_GP:TMR82099.1;Name=TMR82099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998388.1;locus_tag=E3V42_10915;product=hypothetical protein;protein_id=TMR82099.1;transl_table=11 SOQV01000103.1 Genbank pseudogene 24464 24583 . - . ID=gene-E3V42_10920;Name=E3V42_10920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10920;pseudo=true SOQV01000103.1 Protein Homology CDS 24464 24583 . - 0 ID=cds-E3V42_10920;Parent=gene-E3V42_10920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240924.1;locus_tag=E3V42_10920;product=flagellar assembly protein H domain protein;pseudo=true;transl_table=11 SOQV01000103.1 Genbank gene 24580 25554 . - . ID=gene-E3V42_10925;Name=E3V42_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10925 SOQV01000103.1 Protein Homology CDS 24580 25554 . - 0 ID=cds-TMR82100.1;Parent=gene-E3V42_10925;Dbxref=NCBI_GP:TMR82100.1;Name=TMR82100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603336.1;locus_tag=E3V42_10925;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=TMR82100.1;transl_table=11 SOQV01000103.1 Genbank gene 25751 26728 . + . ID=gene-E3V42_10930;Name=E3V42_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10930 SOQV01000103.1 Protein Homology CDS 25751 26728 . + 0 ID=cds-TMR82101.1;Parent=gene-E3V42_10930;Dbxref=NCBI_GP:TMR82101.1;Name=TMR82101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446036.1;locus_tag=E3V42_10930;product=Gfo/Idh/MocA family oxidoreductase;protein_id=TMR82101.1;transl_table=11 SOQV01000103.1 Genbank gene 26725 27807 . + . ID=gene-E3V42_10935;Name=E3V42_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10935 SOQV01000103.1 Protein Homology CDS 26725 27807 . + 0 ID=cds-TMR82102.1;Parent=gene-E3V42_10935;Dbxref=NCBI_GP:TMR82102.1;Name=TMR82102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358929.1;locus_tag=E3V42_10935;product=DEAD/DEAH box helicase;protein_id=TMR82102.1;transl_table=11 SOQV01000103.1 Genbank gene 27800 27934 . - . ID=gene-E3V42_10940;Name=E3V42_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10940 SOQV01000103.1 Protein Homology CDS 27800 27934 . - 0 ID=cds-TMR82105.1;Parent=gene-E3V42_10940;Dbxref=NCBI_GP:TMR82105.1;Name=TMR82105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238277.1;locus_tag=E3V42_10940;product=lysyl-tRNA synthetase;protein_id=TMR82105.1;transl_table=11 SOQV01000103.1 Genbank pseudogene 28161 28235 . - . ID=gene-E3V42_10945;Name=E3V42_10945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10945;pseudo=true SOQV01000103.1 Protein Homology CDS 28161 28235 . - 0 ID=cds-E3V42_10945;Parent=gene-E3V42_10945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_10945;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000103.1 Genbank gene 28332 29528 . - . ID=gene-E3V42_10950;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=E3V42_10950 SOQV01000103.1 Protein Homology CDS 28332 29528 . - 0 ID=cds-TMR82103.1;Parent=gene-E3V42_10950;Dbxref=NCBI_GP:TMR82103.1;Name=TMR82103.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=E3V42_10950;product=elongation factor Tu;protein_id=TMR82103.1;transl_table=11 ##sequence-region SOQV01000104.1 1 54356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000104.1 Genbank region 1 54356 . + . ID=SOQV01000104.1:1..54356;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000104.1 Genbank gene 541 1659 . - . ID=gene-E3V42_10955;Name=cbpD;gbkey=Gene;gene=cbpD;gene_biotype=protein_coding;locus_tag=E3V42_10955 SOQV01000104.1 Protein Homology CDS 541 1659 . - 0 ID=cds-TMR81961.1;Parent=gene-E3V42_10955;Dbxref=NCBI_GP:TMR81961.1;Name=TMR81961.1;gbkey=CDS;gene=cbpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447147.1;locus_tag=E3V42_10955;product=choline binding-anchored murein hydrolase CbpD;protein_id=TMR81961.1;transl_table=11 SOQV01000104.1 Genbank gene 1748 2014 . - . ID=gene-E3V42_10960;Name=E3V42_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10960 SOQV01000104.1 Protein Homology CDS 1748 2014 . - 0 ID=cds-TMR81962.1;Parent=gene-E3V42_10960;Dbxref=NCBI_GP:TMR81962.1;Name=TMR81962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447148.1;locus_tag=E3V42_10960;product=hypothetical protein;protein_id=TMR81962.1;transl_table=11 SOQV01000104.1 Genbank gene 2016 3368 . - . ID=gene-E3V42_10965;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=E3V42_10965 SOQV01000104.1 Protein Homology CDS 2016 3368 . - 0 ID=cds-TMR81963.1;Parent=gene-E3V42_10965;Dbxref=NCBI_GP:TMR81963.1;Name=TMR81963.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359599.1;locus_tag=E3V42_10965;product=replicative DNA helicase;protein_id=TMR81963.1;transl_table=11 SOQV01000104.1 Genbank gene 3412 3864 . - . ID=gene-E3V42_10970;Name=E3V42_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10970 SOQV01000104.1 Protein Homology CDS 3412 3864 . - 0 ID=cds-TMR81964.1;Parent=gene-E3V42_10970;Dbxref=NCBI_GP:TMR81964.1;Name=TMR81964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359600.1;locus_tag=E3V42_10970;product=50S ribosomal protein L9;protein_id=TMR81964.1;transl_table=11 SOQV01000104.1 Genbank gene 3861 5834 . - . ID=gene-E3V42_10975;Name=E3V42_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10975 SOQV01000104.1 Protein Homology CDS 3861 5834 . - 0 ID=cds-TMR81965.1;Parent=gene-E3V42_10975;Dbxref=NCBI_GP:TMR81965.1;Name=TMR81965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359601.1;locus_tag=E3V42_10975;product=DHH family phosphoesterase;protein_id=TMR81965.1;transl_table=11 SOQV01000104.1 Genbank gene 5970 6518 . - . ID=gene-E3V42_10980;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=E3V42_10980 SOQV01000104.1 Protein Homology CDS 5970 6518 . - 0 ID=cds-TMR81966.1;Parent=gene-E3V42_10980;Dbxref=NCBI_GP:TMR81966.1;Name=TMR81966.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359602.1;locus_tag=E3V42_10980;product=ribosome-associated translation inhibitor RaiA;protein_id=TMR81966.1;transl_table=11 SOQV01000104.1 Genbank gene 6598 7260 . - . ID=gene-E3V42_10985;Name=E3V42_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10985 SOQV01000104.1 Protein Homology CDS 6598 7260 . - 0 ID=cds-TMR81967.1;Parent=gene-E3V42_10985;Dbxref=NCBI_GP:TMR81967.1;Name=TMR81967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359603.1;locus_tag=E3V42_10985;product=ComF family protein;protein_id=TMR81967.1;transl_table=11 SOQV01000104.1 Genbank gene 7257 8555 . - . ID=gene-E3V42_10990;Name=E3V42_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10990 SOQV01000104.1 Protein Homology CDS 7257 8555 . - 0 ID=cds-TMR81968.1;Parent=gene-E3V42_10990;Dbxref=NCBI_GP:TMR81968.1;Name=TMR81968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359604.1;locus_tag=E3V42_10990;product=DEAD/DEAH box helicase;protein_id=TMR81968.1;transl_table=11 SOQV01000104.1 Genbank gene 8611 9246 . + . ID=gene-E3V42_10995;Name=E3V42_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10995 SOQV01000104.1 Protein Homology CDS 8611 9246 . + 0 ID=cds-TMR81969.1;Parent=gene-E3V42_10995;Dbxref=NCBI_GP:TMR81969.1;Name=TMR81969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359605.1;locus_tag=E3V42_10995;product=YigZ family protein;protein_id=TMR81969.1;transl_table=11 SOQV01000104.1 Genbank pseudogene 9351 9434 . + . ID=gene-E3V42_11000;Name=E3V42_11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11000;pseudo=true SOQV01000104.1 Protein Homology CDS 9351 9434 . + 0 ID=cds-E3V42_11000;Parent=gene-E3V42_11000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863899.1;locus_tag=E3V42_11000;product=PH domain-containing protein;pseudo=true;transl_table=11 SOQV01000104.1 Genbank gene 9531 10457 . + . ID=gene-E3V42_11005;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=E3V42_11005 SOQV01000104.1 Protein Homology CDS 9531 10457 . + 0 ID=cds-TMR81970.1;Parent=gene-E3V42_11005;Dbxref=NCBI_GP:TMR81970.1;Name=TMR81970.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447156.1;locus_tag=E3V42_11005;product=cysteine synthase A;protein_id=TMR81970.1;transl_table=11 SOQV01000104.1 Genbank gene 10579 11619 . - . ID=gene-E3V42_11010;Name=E3V42_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11010 SOQV01000104.1 Protein Homology CDS 10579 11619 . - 0 ID=cds-TMR81971.1;Parent=gene-E3V42_11010;Dbxref=NCBI_GP:TMR81971.1;Name=TMR81971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003053075.1;locus_tag=E3V42_11010;product=elongation factor Ts;protein_id=TMR81971.1;transl_table=11 SOQV01000104.1 Genbank gene 11699 12478 . - . ID=gene-E3V42_11015;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=E3V42_11015 SOQV01000104.1 Protein Homology CDS 11699 12478 . - 0 ID=cds-TMR81972.1;Parent=gene-E3V42_11015;Dbxref=NCBI_GP:TMR81972.1;Name=TMR81972.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447158.1;locus_tag=E3V42_11015;product=30S ribosomal protein S2;protein_id=TMR81972.1;transl_table=11 SOQV01000104.1 Genbank gene 12701 13879 . - . ID=gene-E3V42_11020;Name=E3V42_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11020 SOQV01000104.1 Protein Homology CDS 12701 13879 . - 0 ID=cds-TMR81973.1;Parent=gene-E3V42_11020;Dbxref=NCBI_GP:TMR81973.1;Name=TMR81973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359612.1;locus_tag=E3V42_11020;product=CHAP domain-containing protein;protein_id=TMR81973.1;transl_table=11 SOQV01000104.1 Genbank gene 13973 14467 . - . ID=gene-E3V42_11025;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=E3V42_11025 SOQV01000104.1 Protein Homology CDS 13973 14467 . - 0 ID=cds-TMR81974.1;Parent=gene-E3V42_11025;Dbxref=NCBI_GP:TMR81974.1;Name=TMR81974.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359613.1;locus_tag=E3V42_11025;product=rod shape-determining protein MreD;protein_id=TMR81974.1;transl_table=11 SOQV01000104.1 Genbank gene 14467 15285 . - . ID=gene-E3V42_11030;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=E3V42_11030 SOQV01000104.1 Protein Homology CDS 14467 15285 . - 0 ID=cds-TMR81975.1;Parent=gene-E3V42_11030;Dbxref=NCBI_GP:TMR81975.1;Name=TMR81975.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359614.1;locus_tag=E3V42_11030;product=rod shape-determining protein MreC;protein_id=TMR81975.1;transl_table=11 SOQV01000104.1 Genbank gene 15345 16139 . - . ID=gene-E3V42_11035;Name=E3V42_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11035 SOQV01000104.1 Protein Homology CDS 15345 16139 . - 0 ID=cds-TMR81976.1;Parent=gene-E3V42_11035;Dbxref=NCBI_GP:TMR81976.1;Name=TMR81976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359615.1;locus_tag=E3V42_11035;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TMR81976.1;transl_table=11 SOQV01000104.1 Genbank gene 16132 16971 . - . ID=gene-E3V42_11040;Name=E3V42_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11040 SOQV01000104.1 Protein Homology CDS 16132 16971 . - 0 ID=cds-TMR81977.1;Parent=gene-E3V42_11040;Dbxref=NCBI_GP:TMR81977.1;Name=TMR81977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447163.1;locus_tag=E3V42_11040;product=energy-coupling factor transporter ATPase;protein_id=TMR81977.1;transl_table=11 SOQV01000104.1 Genbank gene 16956 17783 . - . ID=gene-E3V42_11045;Name=E3V42_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11045 SOQV01000104.1 Protein Homology CDS 16956 17783 . - 0 ID=cds-TMR81978.1;Parent=gene-E3V42_11045;Dbxref=NCBI_GP:TMR81978.1;Name=TMR81978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447164.1;locus_tag=E3V42_11045;product=energy-coupling factor transporter ATPase;protein_id=TMR81978.1;transl_table=11 SOQV01000104.1 Genbank gene 17780 18325 . - . ID=gene-E3V42_11050;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=E3V42_11050 SOQV01000104.1 Protein Homology CDS 17780 18325 . - 0 ID=cds-TMR81979.1;Parent=gene-E3V42_11050;Dbxref=NCBI_GP:TMR81979.1;Name=TMR81979.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359618.1;locus_tag=E3V42_11050;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TMR81979.1;transl_table=11 SOQV01000104.1 Genbank gene 18336 19187 . - . ID=gene-E3V42_11055;Name=E3V42_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11055 SOQV01000104.1 Protein Homology CDS 18336 19187 . - 0 ID=cds-TMR81980.1;Parent=gene-E3V42_11055;Dbxref=NCBI_GP:TMR81980.1;Name=TMR81980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359619.1;locus_tag=E3V42_11055;product=helix-turn-helix domain-containing protein;protein_id=TMR81980.1;transl_table=11 SOQV01000104.1 Genbank gene 19220 20503 . - . ID=gene-E3V42_11060;Name=E3V42_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11060 SOQV01000104.1 Protein Homology CDS 19220 20503 . - 0 ID=cds-TMR81981.1;Parent=gene-E3V42_11060;Dbxref=NCBI_GP:TMR81981.1;Name=TMR81981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359620.1;locus_tag=E3V42_11060;product=insulinase family protein;protein_id=TMR81981.1;transl_table=11 SOQV01000104.1 Genbank gene 20500 21750 . - . ID=gene-E3V42_11065;Name=E3V42_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11065 SOQV01000104.1 Protein Homology CDS 20500 21750 . - 0 ID=cds-TMR81982.1;Parent=gene-E3V42_11065;Dbxref=NCBI_GP:TMR81982.1;Name=TMR81982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359621.1;locus_tag=E3V42_11065;product=insulinase family protein;protein_id=TMR81982.1;transl_table=11 SOQV01000104.1 Genbank gene 21909 22277 . + . ID=gene-E3V42_11070;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=E3V42_11070 SOQV01000104.1 Protein Homology CDS 21909 22277 . + 0 ID=cds-TMR81983.1;Parent=gene-E3V42_11070;Dbxref=NCBI_GP:TMR81983.1;Name=TMR81983.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359622.1;locus_tag=E3V42_11070;product=S4 domain-containing protein YaaA;protein_id=TMR81983.1;transl_table=11 SOQV01000104.1 Genbank gene 22280 23377 . + . ID=gene-E3V42_11075;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=E3V42_11075 SOQV01000104.1 Protein Homology CDS 22280 23377 . + 0 ID=cds-TMR81984.1;Parent=gene-E3V42_11075;Dbxref=NCBI_GP:TMR81984.1;Name=TMR81984.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266672.1;locus_tag=E3V42_11075;product=DNA replication/repair protein RecF;protein_id=TMR81984.1;transl_table=11 SOQV01000104.1 Genbank gene 23427 24905 . - . ID=gene-E3V42_11080;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=E3V42_11080 SOQV01000104.1 Protein Homology CDS 23427 24905 . - 0 ID=cds-TMR81985.1;Parent=gene-E3V42_11080;Dbxref=NCBI_GP:TMR81985.1;Name=TMR81985.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359624.1;locus_tag=E3V42_11080;product=IMP dehydrogenase;protein_id=TMR81985.1;transl_table=11 SOQV01000104.1 Genbank gene 25057 26082 . - . ID=gene-E3V42_11085;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=E3V42_11085 SOQV01000104.1 Protein Homology CDS 25057 26082 . - 0 ID=cds-TMR81986.1;Parent=gene-E3V42_11085;Dbxref=NCBI_GP:TMR81986.1;Name=TMR81986.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447172.1;locus_tag=E3V42_11085;product=tryptophan--tRNA ligase;protein_id=TMR81986.1;transl_table=11 SOQV01000104.1 Genbank gene 26288 27910 . + . ID=gene-E3V42_11090;Name=E3V42_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11090 SOQV01000104.1 Protein Homology CDS 26288 27910 . + 0 ID=cds-TMR81987.1;Parent=gene-E3V42_11090;Dbxref=NCBI_GP:TMR81987.1;Name=TMR81987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511338.1;locus_tag=E3V42_11090;product=ATP-binding cassette domain-containing protein;protein_id=TMR81987.1;transl_table=11 SOQV01000104.1 Genbank gene 27970 30513 . + . ID=gene-E3V42_11095;Name=E3V42_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11095 SOQV01000104.1 Protein Homology CDS 27970 30513 . + 0 ID=cds-TMR81988.1;Parent=gene-E3V42_11095;Dbxref=NCBI_GP:TMR81988.1;Name=TMR81988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359627.1;locus_tag=E3V42_11095;product=copper ABC transporter permease;protein_id=TMR81988.1;transl_table=11 SOQV01000104.1 Genbank gene 30543 33182 . - . ID=gene-E3V42_11100;Name=E3V42_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11100 SOQV01000104.1 Protein Homology CDS 30543 33182 . - 0 ID=cds-TMR82008.1;Parent=gene-E3V42_11100;Dbxref=NCBI_GP:TMR82008.1;Name=TMR82008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447175.1;locus_tag=E3V42_11100;product=YhgE/Pip domain-containing protein;protein_id=TMR82008.1;transl_table=11 SOQV01000104.1 Genbank gene 33310 33852 . + . ID=gene-E3V42_11105;Name=E3V42_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11105 SOQV01000104.1 Protein Homology CDS 33310 33852 . + 0 ID=cds-TMR81989.1;Parent=gene-E3V42_11105;Dbxref=NCBI_GP:TMR81989.1;Name=TMR81989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359631.1;locus_tag=E3V42_11105;product=TetR/AcrR family transcriptional regulator;protein_id=TMR81989.1;transl_table=11 SOQV01000104.1 Genbank gene 33893 33966 . - . ID=gene-E3V42_11110;Name=E3V42_11110;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_11110 SOQV01000104.1 tRNAscan-SE tRNA 33893 33966 . - . ID=rna-E3V42_11110;Parent=gene-E3V42_11110;anticodon=(pos:complement(33930..33932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11110;product=tRNA-Asn SOQV01000104.1 tRNAscan-SE exon 33893 33966 . - . ID=exon-E3V42_11110-1;Parent=rna-E3V42_11110;anticodon=(pos:complement(33930..33932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11110;product=tRNA-Asn SOQV01000104.1 Genbank gene 33972 34043 . - . ID=gene-E3V42_11115;Name=E3V42_11115;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_11115 SOQV01000104.1 tRNAscan-SE tRNA 33972 34043 . - . ID=rna-E3V42_11115;Parent=gene-E3V42_11115;anticodon=(pos:complement(34008..34010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11115;product=tRNA-Glu SOQV01000104.1 tRNAscan-SE exon 33972 34043 . - . ID=exon-E3V42_11115-1;Parent=rna-E3V42_11115;anticodon=(pos:complement(34008..34010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11115;product=tRNA-Glu SOQV01000104.1 Genbank gene 34095 34847 . - . ID=gene-E3V42_11120;Name=E3V42_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11120 SOQV01000104.1 Protein Homology CDS 34095 34847 . - 0 ID=cds-TMR81990.1;Parent=gene-E3V42_11120;Dbxref=NCBI_GP:TMR81990.1;Name=TMR81990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359632.1;locus_tag=E3V42_11120;product=response regulator transcription factor;protein_id=TMR81990.1;transl_table=11 SOQV01000104.1 Genbank gene 34844 36169 . - . ID=gene-E3V42_11125;Name=E3V42_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11125 SOQV01000104.1 Protein Homology CDS 34844 36169 . - 0 ID=cds-TMR81991.1;Parent=gene-E3V42_11125;Dbxref=NCBI_GP:TMR81991.1;Name=TMR81991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359633.1;locus_tag=E3V42_11125;product=sensor histidine kinase;protein_id=TMR81991.1;transl_table=11 SOQV01000104.1 Genbank gene 36190 36315 . - . ID=gene-E3V42_11130;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=E3V42_11130 SOQV01000104.1 Protein Homology CDS 36190 36315 . - 0 ID=cds-TMR81992.1;Parent=gene-E3V42_11130;Dbxref=NCBI_GP:TMR81992.1;Name=TMR81992.1;gbkey=CDS;gene=comC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359634.1;locus_tag=E3V42_11130;product=competence-stimulating peptide ComC;protein_id=TMR81992.1;transl_table=11 SOQV01000104.1 Genbank gene 36480 36553 . - . ID=gene-E3V42_11135;Name=E3V42_11135;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_11135 SOQV01000104.1 tRNAscan-SE tRNA 36480 36553 . - . ID=rna-E3V42_11135;Parent=gene-E3V42_11135;anticodon=(pos:complement(36517..36519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11135;product=tRNA-Arg SOQV01000104.1 tRNAscan-SE exon 36480 36553 . - . ID=exon-E3V42_11135-1;Parent=rna-E3V42_11135;anticodon=(pos:complement(36517..36519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11135;product=tRNA-Arg SOQV01000104.1 Genbank gene 36594 37073 . - . ID=gene-E3V42_11140;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=E3V42_11140 SOQV01000104.1 Protein Homology CDS 36594 37073 . - 0 ID=cds-TMR81993.1;Parent=gene-E3V42_11140;Dbxref=NCBI_GP:TMR81993.1;Name=TMR81993.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359635.1;locus_tag=E3V42_11140;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=TMR81993.1;transl_table=11 SOQV01000104.1 Genbank gene 37244 38437 . + . ID=gene-E3V42_11145;Name=E3V42_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11145 SOQV01000104.1 Protein Homology CDS 37244 38437 . + 0 ID=cds-TMR81994.1;Parent=gene-E3V42_11145;Dbxref=NCBI_GP:TMR81994.1;Name=TMR81994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359636.1;locus_tag=E3V42_11145;product=serine protease;protein_id=TMR81994.1;transl_table=11 SOQV01000104.1 Genbank gene 38495 39253 . + . ID=gene-E3V42_11150;Name=E3V42_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11150 SOQV01000104.1 Protein Homology CDS 38495 39253 . + 0 ID=cds-TMR81995.1;Parent=gene-E3V42_11150;Dbxref=NCBI_GP:TMR81995.1;Name=TMR81995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359637.1;locus_tag=E3V42_11150;product=ParB/RepB/Spo0J family partition protein;protein_id=TMR81995.1;transl_table=11 SOQV01000104.1 Genbank gene 39466 40827 . + . ID=gene-E3V42_11155;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=E3V42_11155 SOQV01000104.1 Protein Homology CDS 39466 40827 . + 0 ID=cds-TMR81996.1;Parent=gene-E3V42_11155;Dbxref=NCBI_GP:TMR81996.1;Name=TMR81996.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357595.1;locus_tag=E3V42_11155;product=chromosomal replication initiator protein DnaA;protein_id=TMR81996.1;transl_table=11 SOQV01000104.1 Genbank gene 40986 42122 . + . ID=gene-E3V42_11160;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=E3V42_11160 SOQV01000104.1 Protein Homology CDS 40986 42122 . + 0 ID=cds-TMR81997.1;Parent=gene-E3V42_11160;Dbxref=NCBI_GP:TMR81997.1;Name=TMR81997.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357596.1;locus_tag=E3V42_11160;product=DNA polymerase III subunit beta;protein_id=TMR81997.1;transl_table=11 SOQV01000104.1 Genbank gene 42187 42381 . + . ID=gene-E3V42_11165;Name=E3V42_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11165 SOQV01000104.1 Protein Homology CDS 42187 42381 . + 0 ID=cds-TMR81998.1;Parent=gene-E3V42_11165;Dbxref=NCBI_GP:TMR81998.1;Name=TMR81998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357597.1;locus_tag=E3V42_11165;product=DUF951 family protein;protein_id=TMR81998.1;transl_table=11 SOQV01000104.1 Genbank gene 42465 43580 . + . ID=gene-E3V42_11170;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=E3V42_11170 SOQV01000104.1 Protein Homology CDS 42465 43580 . + 0 ID=cds-TMR82009.1;Parent=gene-E3V42_11170;Dbxref=NCBI_GP:TMR82009.1;Name=TMR82009.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357598.1;locus_tag=E3V42_11170;product=redox-regulated ATPase YchF;protein_id=TMR82009.1;transl_table=11 SOQV01000104.1 Genbank gene 43652 44221 . + . ID=gene-E3V42_11175;Name=E3V42_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11175 SOQV01000104.1 Protein Homology CDS 43652 44221 . + 0 ID=cds-TMR81999.1;Parent=gene-E3V42_11175;Dbxref=NCBI_GP:TMR81999.1;Name=TMR81999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445181.1;locus_tag=E3V42_11175;product=aminoacyl-tRNA hydrolase;protein_id=TMR81999.1;transl_table=11 SOQV01000104.1 Genbank gene 44222 47725 . + . ID=gene-E3V42_11180;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=E3V42_11180 SOQV01000104.1 Protein Homology CDS 44222 47725 . + 0 ID=cds-TMR82000.1;Parent=gene-E3V42_11180;Dbxref=NCBI_GP:TMR82000.1;Name=TMR82000.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357600.1;locus_tag=E3V42_11180;product=transcription-repair coupling factor;protein_id=TMR82000.1;transl_table=11 SOQV01000104.1 Genbank gene 47783 48049 . + . ID=gene-E3V42_11185;Name=E3V42_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11185 SOQV01000104.1 Protein Homology CDS 47783 48049 . + 0 ID=cds-TMR82001.1;Parent=gene-E3V42_11185;Dbxref=NCBI_GP:TMR82001.1;Name=TMR82001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357601.1;locus_tag=E3V42_11185;product=RNA-binding S4 domain-containing protein;protein_id=TMR82001.1;transl_table=11 SOQV01000104.1 Genbank gene 48042 48410 . + . ID=gene-E3V42_11190;Name=E3V42_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11190 SOQV01000104.1 Protein Homology CDS 48042 48410 . + 0 ID=cds-TMR82002.1;Parent=gene-E3V42_11190;Dbxref=NCBI_GP:TMR82002.1;Name=TMR82002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445184.1;locus_tag=E3V42_11190;product=septum formation initiator family protein;protein_id=TMR82002.1;transl_table=11 SOQV01000104.1 Genbank gene 48530 49798 . + . ID=gene-E3V42_11195;Name=E3V42_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11195 SOQV01000104.1 Protein Homology CDS 48530 49798 . + 0 ID=cds-TMR82003.1;Parent=gene-E3V42_11195;Dbxref=NCBI_GP:TMR82003.1;Name=TMR82003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445185.1;locus_tag=E3V42_11195;product=serine hydrolase;protein_id=TMR82003.1;transl_table=11 SOQV01000104.1 Genbank gene 49795 51072 . + . ID=gene-E3V42_11200;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=E3V42_11200 SOQV01000104.1 Protein Homology CDS 49795 51072 . + 0 ID=cds-TMR82004.1;Parent=gene-E3V42_11200;Dbxref=NCBI_GP:TMR82004.1;Name=TMR82004.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357604.1;locus_tag=E3V42_11200;product=tRNA lysidine(34) synthetase TilS;protein_id=TMR82004.1;transl_table=11 SOQV01000104.1 Genbank gene 51077 51619 . + . ID=gene-E3V42_11205;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=E3V42_11205 SOQV01000104.1 Protein Homology CDS 51077 51619 . + 0 ID=cds-TMR82005.1;Parent=gene-E3V42_11205;Dbxref=NCBI_GP:TMR82005.1;Name=TMR82005.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445187.1;locus_tag=E3V42_11205;product=hypoxanthine phosphoribosyltransferase;protein_id=TMR82005.1;transl_table=11 SOQV01000104.1 Genbank gene 51635 53593 . + . ID=gene-E3V42_11210;Name=E3V42_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11210 SOQV01000104.1 Protein Homology CDS 51635 53593 . + 0 ID=cds-TMR82006.1;Parent=gene-E3V42_11210;Dbxref=NCBI_GP:TMR82006.1;Name=TMR82006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445188.1;locus_tag=E3V42_11210;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=TMR82006.1;transl_table=11 SOQV01000104.1 Genbank gene 53713 54192 . + . ID=gene-E3V42_11215;Name=E3V42_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11215 SOQV01000104.1 Protein Homology CDS 53713 54192 . + 0 ID=cds-TMR82007.1;Parent=gene-E3V42_11215;Dbxref=NCBI_GP:TMR82007.1;Name=TMR82007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588858.1;locus_tag=E3V42_11215;product=sigma-70 family RNA polymerase sigma factor;protein_id=TMR82007.1;transl_table=11 ##sequence-region SOQV01000105.1 1 37991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000105.1 Genbank region 1 37991 . + . ID=SOQV01000105.1:1..37991;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000105.1 Genbank gene 1 157 . - . ID=gene-E3V42_11220;Name=E3V42_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11220;partial=true;start_range=.,1 SOQV01000105.1 Protein Homology CDS 1 157 . - 0 ID=cds-TMR81905.1;Parent=gene-E3V42_11220;Dbxref=NCBI_GP:TMR81905.1;Name=TMR81905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_11220;partial=true;product=IS630 family transposase;protein_id=TMR81905.1;start_range=.,1;transl_table=11 SOQV01000105.1 Genbank gene 633 1085 . - . ID=gene-E3V42_11225;Name=E3V42_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11225 SOQV01000105.1 Protein Homology CDS 633 1085 . - 0 ID=cds-TMR81906.1;Parent=gene-E3V42_11225;Dbxref=NCBI_GP:TMR81906.1;Name=TMR81906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446356.1;locus_tag=E3V42_11225;product=hypothetical protein;protein_id=TMR81906.1;transl_table=11 SOQV01000105.1 Genbank gene 1099 4176 . - . ID=gene-E3V42_11230;Name=E3V42_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11230 SOQV01000105.1 Protein Homology CDS 1099 4176 . - 0 ID=cds-TMR81907.1;Parent=gene-E3V42_11230;Dbxref=NCBI_GP:TMR81907.1;Name=TMR81907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446357.1;locus_tag=E3V42_11230;product=DEAD/DEAH box helicase;protein_id=TMR81907.1;transl_table=11 SOQV01000105.1 Genbank gene 4240 4725 . - . ID=gene-E3V42_11235;Name=E3V42_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11235 SOQV01000105.1 GeneMarkS-2+ CDS 4240 4725 . - 0 ID=cds-TMR81908.1;Parent=gene-E3V42_11235;Dbxref=NCBI_GP:TMR81908.1;Name=TMR81908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_11235;product=hypothetical protein;protein_id=TMR81908.1;transl_table=11 SOQV01000105.1 Genbank gene 4729 6417 . - . ID=gene-E3V42_11240;Name=E3V42_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11240 SOQV01000105.1 Protein Homology CDS 4729 6417 . - 0 ID=cds-TMR81909.1;Parent=gene-E3V42_11240;Dbxref=NCBI_GP:TMR81909.1;Name=TMR81909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349001.1;locus_tag=E3V42_11240;product=site-specific DNA-methyltransferase;protein_id=TMR81909.1;transl_table=11 SOQV01000105.1 Genbank pseudogene 6595 6696 . - . ID=gene-E3V42_11245;Name=E3V42_11245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11245;pseudo=true SOQV01000105.1 Protein Homology CDS 6595 6696 . - 0 ID=cds-E3V42_11245;Parent=gene-E3V42_11245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248054.1;locus_tag=E3V42_11245;product=adenine methyltransferase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank gene 7113 8684 . - . ID=gene-E3V42_11250;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=E3V42_11250 SOQV01000105.1 Protein Homology CDS 7113 8684 . - 0 ID=cds-TMR81910.1;Parent=gene-E3V42_11250;Dbxref=NCBI_GP:TMR81910.1;Name=TMR81910.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358759.1;locus_tag=E3V42_11250;product=signal recognition particle protein;protein_id=TMR81910.1;transl_table=11 SOQV01000105.1 Genbank gene 8696 9028 . - . ID=gene-E3V42_11255;Name=E3V42_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11255 SOQV01000105.1 Protein Homology CDS 8696 9028 . - 0 ID=cds-TMR81911.1;Parent=gene-E3V42_11255;Dbxref=NCBI_GP:TMR81911.1;Name=TMR81911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446363.1;locus_tag=E3V42_11255;product=putative DNA-binding protein;protein_id=TMR81911.1;transl_table=11 SOQV01000105.1 Genbank gene 9129 9506 . - . ID=gene-E3V42_11260;Name=E3V42_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11260 SOQV01000105.1 Protein Homology CDS 9129 9506 . - 0 ID=cds-TMR81912.1;Parent=gene-E3V42_11260;Dbxref=NCBI_GP:TMR81912.1;Name=TMR81912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358761.1;locus_tag=E3V42_11260;product=DUF1934 domain-containing protein;protein_id=TMR81912.1;transl_table=11 SOQV01000105.1 Genbank gene 9578 10882 . + . ID=gene-E3V42_11265;Name=E3V42_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11265 SOQV01000105.1 Protein Homology CDS 9578 10882 . + 0 ID=cds-TMR81913.1;Parent=gene-E3V42_11265;Dbxref=NCBI_GP:TMR81913.1;Name=TMR81913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446365.1;locus_tag=E3V42_11265;product=HD domain-containing protein;protein_id=TMR81913.1;transl_table=11 SOQV01000105.1 Genbank gene 10895 11701 . + . ID=gene-E3V42_11270;Name=E3V42_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11270 SOQV01000105.1 Protein Homology CDS 10895 11701 . + 0 ID=cds-TMR81914.1;Parent=gene-E3V42_11270;Dbxref=NCBI_GP:TMR81914.1;Name=TMR81914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358763.1;locus_tag=E3V42_11270;product=sugar-phosphatase;protein_id=TMR81914.1;transl_table=11 SOQV01000105.1 Genbank pseudogene 11908 12015 . - . ID=gene-E3V42_11275;Name=E3V42_11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11275;pseudo=true SOQV01000105.1 Protein Homology CDS 11908 12015 . - 0 ID=cds-E3V42_11275;Parent=gene-E3V42_11275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=E3V42_11275;product=site-specific recombinase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank pseudogene 12051 12748 . + . ID=gene-E3V42_11280;Name=E3V42_11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11280;pseudo=true SOQV01000105.1 Protein Homology CDS 12051 12748 . + 0 ID=cds-E3V42_11280;Parent=gene-E3V42_11280;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_11280;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank pseudogene 12851 12958 . + . ID=gene-E3V42_11285;Name=E3V42_11285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11285;pseudo=true SOQV01000105.1 Protein Homology CDS 12851 12958 . + 0 ID=cds-E3V42_11285;Parent=gene-E3V42_11285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_11285;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank pseudogene 12973 13182 . - . ID=gene-E3V42_11290;Name=E3V42_11290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11290;pseudo=true SOQV01000105.1 Protein Homology CDS 12973 13182 . - 0 ID=cds-E3V42_11290;Parent=gene-E3V42_11290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=E3V42_11290;product=site-specific recombinase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank gene 13309 13683 . - . ID=gene-E3V42_11295;Name=E3V42_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11295 SOQV01000105.1 Protein Homology CDS 13309 13683 . - 0 ID=cds-TMR81915.1;Parent=gene-E3V42_11295;Dbxref=NCBI_GP:TMR81915.1;Name=TMR81915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446371.1;locus_tag=E3V42_11295;product=DUF86 domain-containing protein;protein_id=TMR81915.1;transl_table=11 SOQV01000105.1 Genbank gene 13658 13978 . - . ID=gene-E3V42_11300;Name=E3V42_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11300 SOQV01000105.1 Protein Homology CDS 13658 13978 . - 0 ID=cds-TMR81916.1;Parent=gene-E3V42_11300;Dbxref=NCBI_GP:TMR81916.1;Name=TMR81916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446372.1;locus_tag=E3V42_11300;product=nucleotidyltransferase domain-containing protein;protein_id=TMR81916.1;transl_table=11 SOQV01000105.1 Genbank gene 14024 14185 . - . ID=gene-E3V42_11305;Name=E3V42_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11305 SOQV01000105.1 Protein Homology CDS 14024 14185 . - 0 ID=cds-TMR81917.1;Parent=gene-E3V42_11305;Dbxref=NCBI_GP:TMR81917.1;Name=TMR81917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077978.1;locus_tag=E3V42_11305;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=TMR81917.1;transl_table=11 SOQV01000105.1 Genbank gene 14275 14652 . - . ID=gene-E3V42_11310;Name=E3V42_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11310 SOQV01000105.1 Protein Homology CDS 14275 14652 . - 0 ID=cds-TMR81918.1;Parent=gene-E3V42_11310;Dbxref=NCBI_GP:TMR81918.1;Name=TMR81918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002282907.1;locus_tag=E3V42_11310;product=HicB family protein;protein_id=TMR81918.1;transl_table=11 SOQV01000105.1 Genbank gene 14710 14898 . - . ID=gene-E3V42_11315;Name=E3V42_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11315 SOQV01000105.1 Protein Homology CDS 14710 14898 . - 0 ID=cds-TMR81919.1;Parent=gene-E3V42_11315;Dbxref=NCBI_GP:TMR81919.1;Name=TMR81919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003088683.1;locus_tag=E3V42_11315;product=type II toxin-antitoxin system HicA family toxin;protein_id=TMR81919.1;transl_table=11 SOQV01000105.1 Genbank gene 15171 15242 . - . ID=gene-E3V42_11320;Name=E3V42_11320;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_11320 SOQV01000105.1 tRNAscan-SE tRNA 15171 15242 . - . ID=rna-E3V42_11320;Parent=gene-E3V42_11320;anticodon=(pos:complement(15207..15209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11320;product=tRNA-Arg SOQV01000105.1 tRNAscan-SE exon 15171 15242 . - . ID=exon-E3V42_11320-1;Parent=rna-E3V42_11320;anticodon=(pos:complement(15207..15209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_11320;product=tRNA-Arg SOQV01000105.1 Genbank gene 15283 15630 . - . ID=gene-E3V42_11325;Name=E3V42_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11325 SOQV01000105.1 Protein Homology CDS 15283 15630 . - 0 ID=cds-TMR81920.1;Parent=gene-E3V42_11325;Dbxref=NCBI_GP:TMR81920.1;Name=TMR81920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=E3V42_11325;product=50S ribosomal protein L19;protein_id=TMR81920.1;transl_table=11 SOQV01000105.1 Genbank gene 15749 16078 . - . ID=gene-E3V42_11330;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=E3V42_11330 SOQV01000105.1 Protein Homology CDS 15749 16078 . - 0 ID=cds-TMR81921.1;Parent=gene-E3V42_11330;Dbxref=NCBI_GP:TMR81921.1;Name=TMR81921.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446375.1;locus_tag=E3V42_11330;product=fluoride efflux transporter CrcB;protein_id=TMR81921.1;transl_table=11 SOQV01000105.1 Genbank gene 16072 16446 . - . ID=gene-E3V42_11335;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=E3V42_11335 SOQV01000105.1 Protein Homology CDS 16072 16446 . - 0 ID=cds-TMR81922.1;Parent=gene-E3V42_11335;Dbxref=NCBI_GP:TMR81922.1;Name=TMR81922.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358766.1;locus_tag=E3V42_11335;product=fluoride efflux transporter CrcB;protein_id=TMR81922.1;transl_table=11 SOQV01000105.1 Genbank gene 16443 16709 . - . ID=gene-E3V42_11340;Name=E3V42_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11340 SOQV01000105.1 Protein Homology CDS 16443 16709 . - 0 ID=cds-TMR81923.1;Parent=gene-E3V42_11340;Dbxref=NCBI_GP:TMR81923.1;Name=TMR81923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358767.1;locus_tag=E3V42_11340;product=chorismate mutase;protein_id=TMR81923.1;transl_table=11 SOQV01000105.1 Genbank gene 16825 17268 . - . ID=gene-E3V42_11345;Name=E3V42_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11345 SOQV01000105.1 Protein Homology CDS 16825 17268 . - 0 ID=cds-TMR81924.1;Parent=gene-E3V42_11345;Dbxref=NCBI_GP:TMR81924.1;Name=TMR81924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358768.1;locus_tag=E3V42_11345;product=flavodoxin;protein_id=TMR81924.1;transl_table=11 SOQV01000105.1 Genbank gene 17372 18307 . + . ID=gene-E3V42_11350;Name=E3V42_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11350 SOQV01000105.1 Protein Homology CDS 17372 18307 . + 0 ID=cds-TMR81925.1;Parent=gene-E3V42_11350;Dbxref=NCBI_GP:TMR81925.1;Name=TMR81925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446379.1;locus_tag=E3V42_11350;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=TMR81925.1;transl_table=11 SOQV01000105.1 Genbank gene 18403 18645 . + . ID=gene-E3V42_11355;Name=E3V42_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11355 SOQV01000105.1 Protein Homology CDS 18403 18645 . + 0 ID=cds-TMR81926.1;Parent=gene-E3V42_11355;Dbxref=NCBI_GP:TMR81926.1;Name=TMR81926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358770.1;locus_tag=E3V42_11355;product=type B 50S ribosomal protein L31;protein_id=TMR81926.1;transl_table=11 SOQV01000105.1 Genbank gene 18736 19107 . + . ID=gene-E3V42_11360;Name=E3V42_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11360 SOQV01000105.1 Protein Homology CDS 18736 19107 . + 0 ID=cds-TMR81927.1;Parent=gene-E3V42_11360;Dbxref=NCBI_GP:TMR81927.1;Name=TMR81927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446381.1;locus_tag=E3V42_11360;product=RelB antitoxin;protein_id=TMR81927.1;transl_table=11 SOQV01000105.1 Genbank gene 19097 19456 . + . ID=gene-E3V42_11365;Name=E3V42_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11365 SOQV01000105.1 Protein Homology CDS 19097 19456 . + 0 ID=cds-TMR81928.1;Parent=gene-E3V42_11365;Dbxref=NCBI_GP:TMR81928.1;Name=TMR81928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446382.1;locus_tag=E3V42_11365;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR81928.1;transl_table=11 SOQV01000105.1 Genbank gene 19592 19762 . - . ID=gene-E3V42_11370;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=E3V42_11370 SOQV01000105.1 Protein Homology CDS 19592 19762 . - 0 ID=cds-TMR81929.1;Parent=gene-E3V42_11370;Dbxref=NCBI_GP:TMR81929.1;Name=TMR81929.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446383.1;locus_tag=E3V42_11370;product=twin-arginine translocase TatA/TatE family subunit;protein_id=TMR81929.1;transl_table=11 SOQV01000105.1 Genbank gene 19746 20477 . - . ID=gene-E3V42_11375;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=E3V42_11375 SOQV01000105.1 Protein Homology CDS 19746 20477 . - 0 ID=cds-TMR81930.1;Parent=gene-E3V42_11375;Dbxref=NCBI_GP:TMR81930.1;Name=TMR81930.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446384.1;locus_tag=E3V42_11375;product=twin-arginine translocase subunit TatC;protein_id=TMR81930.1;transl_table=11 SOQV01000105.1 Genbank gene 20478 22166 . - . ID=gene-E3V42_11380;Name=E3V42_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11380 SOQV01000105.1 Protein Homology CDS 20478 22166 . - 0 ID=cds-TMR81931.1;Parent=gene-E3V42_11380;Dbxref=NCBI_GP:TMR81931.1;Name=TMR81931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446385.1;locus_tag=E3V42_11380;product=FTR1 family iron permease;protein_id=TMR81931.1;transl_table=11 SOQV01000105.1 Genbank gene 22141 23355 . - . ID=gene-E3V42_11385;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=E3V42_11385 SOQV01000105.1 Protein Homology CDS 22141 23355 . - 0 ID=cds-TMR81932.1;Parent=gene-E3V42_11385;Dbxref=NCBI_GP:TMR81932.1;Name=TMR81932.1;gbkey=CDS;gene=efeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446386.1;locus_tag=E3V42_11385;product=deferrochelatase/peroxidase EfeB;protein_id=TMR81932.1;transl_table=11 SOQV01000105.1 Genbank gene 23361 24233 . - . ID=gene-E3V42_11390;Name=E3V42_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11390 SOQV01000105.1 Protein Homology CDS 23361 24233 . - 0 ID=cds-TMR81933.1;Parent=gene-E3V42_11390;Dbxref=NCBI_GP:TMR81933.1;Name=TMR81933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446387.1;locus_tag=E3V42_11390;product=EfeM/EfeO family lipoprotein;protein_id=TMR81933.1;transl_table=11 SOQV01000105.1 Genbank gene 24341 24700 . - . ID=gene-E3V42_11395;Name=E3V42_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11395 SOQV01000105.1 Protein Homology CDS 24341 24700 . - 0 ID=cds-TMR81945.1;Parent=gene-E3V42_11395;Dbxref=NCBI_GP:TMR81945.1;Name=TMR81945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284914.1;locus_tag=E3V42_11395;product=hypothetical protein;protein_id=TMR81945.1;transl_table=11 SOQV01000105.1 Genbank gene 24863 24994 . + . ID=gene-E3V42_11400;Name=E3V42_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11400 SOQV01000105.1 Protein Homology CDS 24863 24994 . + 0 ID=cds-TMR81934.1;Parent=gene-E3V42_11400;Dbxref=NCBI_GP:TMR81934.1;Name=TMR81934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446195.1;locus_tag=E3V42_11400;product=hypothetical protein;protein_id=TMR81934.1;transl_table=11 SOQV01000105.1 Genbank gene 24995 25900 . + . ID=gene-E3V42_11405;Name=E3V42_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11405 SOQV01000105.1 Protein Homology CDS 24995 25900 . + 0 ID=cds-TMR81935.1;Parent=gene-E3V42_11405;Dbxref=NCBI_GP:TMR81935.1;Name=TMR81935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358399.1;locus_tag=E3V42_11405;product=permease;protein_id=TMR81935.1;transl_table=11 SOQV01000105.1 Genbank gene 25897 26712 . + . ID=gene-E3V42_11410;Name=E3V42_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11410 SOQV01000105.1 Protein Homology CDS 25897 26712 . + 0 ID=cds-TMR81936.1;Parent=gene-E3V42_11410;Dbxref=NCBI_GP:TMR81936.1;Name=TMR81936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358398.1;locus_tag=E3V42_11410;product=TIGR03943 family protein;protein_id=TMR81936.1;transl_table=11 SOQV01000105.1 Genbank gene 26841 27557 . - . ID=gene-E3V42_11415;Name=E3V42_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11415 SOQV01000105.1 Protein Homology CDS 26841 27557 . - 0 ID=cds-TMR81937.1;Parent=gene-E3V42_11415;Dbxref=NCBI_GP:TMR81937.1;Name=TMR81937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358397.1;locus_tag=E3V42_11415;product=alpha/beta hydrolase;protein_id=TMR81937.1;transl_table=11 SOQV01000105.1 Genbank gene 27561 27872 . - . ID=gene-E3V42_11420;Name=E3V42_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11420 SOQV01000105.1 Protein Homology CDS 27561 27872 . - 0 ID=cds-TMR81938.1;Parent=gene-E3V42_11420;Dbxref=NCBI_GP:TMR81938.1;Name=TMR81938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446201.1;locus_tag=E3V42_11420;product=hypothetical protein;protein_id=TMR81938.1;transl_table=11 SOQV01000105.1 Genbank gene 27985 28164 . - . ID=gene-E3V42_11425;Name=E3V42_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11425 SOQV01000105.1 Protein Homology CDS 27985 28164 . - 0 ID=cds-TMR81939.1;Parent=gene-E3V42_11425;Dbxref=NCBI_GP:TMR81939.1;Name=TMR81939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859476.1;locus_tag=E3V42_11425;product=hypothetical protein;protein_id=TMR81939.1;transl_table=11 SOQV01000105.1 Genbank gene 28177 29049 . - . ID=gene-E3V42_11430;Name=E3V42_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11430 SOQV01000105.1 Protein Homology CDS 28177 29049 . - 0 ID=cds-TMR81940.1;Parent=gene-E3V42_11430;Dbxref=NCBI_GP:TMR81940.1;Name=TMR81940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358393.1;locus_tag=E3V42_11430;product=DUF4300 family protein;protein_id=TMR81940.1;transl_table=11 SOQV01000105.1 Genbank pseudogene 29522 30037 . + . ID=gene-E3V42_11435;Name=E3V42_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11435;pseudo=true SOQV01000105.1 Protein Homology CDS 29522 30037 . + 0 ID=cds-E3V42_11435;Parent=gene-E3V42_11435;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001023158.1;locus_tag=E3V42_11435;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 SOQV01000105.1 Genbank gene 30187 30453 . + . ID=gene-E3V42_11440;Name=E3V42_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11440 SOQV01000105.1 Protein Homology CDS 30187 30453 . + 0 ID=cds-TMR81946.1;Parent=gene-E3V42_11440;Dbxref=NCBI_GP:TMR81946.1;Name=TMR81946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167984.1;locus_tag=E3V42_11440;product=integrase;protein_id=TMR81946.1;transl_table=11 SOQV01000105.1 Genbank gene 30530 30742 . + . ID=gene-E3V42_11445;Name=E3V42_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11445 SOQV01000105.1 Protein Homology CDS 30530 30742 . + 0 ID=cds-TMR81941.1;Parent=gene-E3V42_11445;Dbxref=NCBI_GP:TMR81941.1;Name=TMR81941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_11445;product=hypothetical protein;protein_id=TMR81941.1;transl_table=11 SOQV01000105.1 Genbank pseudogene 30792 32058 . + . ID=gene-E3V42_11450;Name=E3V42_11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11450;pseudo=true SOQV01000105.1 Protein Homology CDS 30792 32058 . + 0 ID=cds-E3V42_11450;Parent=gene-E3V42_11450;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V42_11450;product=transposase;pseudo=true;transl_table=11 SOQV01000105.1 Genbank gene 32149 33654 . - . ID=gene-E3V42_11455;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=E3V42_11455 SOQV01000105.1 Protein Homology CDS 32149 33654 . - 0 ID=cds-TMR81942.1;Parent=gene-E3V42_11455;Dbxref=NCBI_GP:TMR81942.1;Name=TMR81942.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358391.1;locus_tag=E3V42_11455;product=pyruvate kinase;protein_id=TMR81942.1;transl_table=11 SOQV01000105.1 Genbank gene 33713 34720 . - . ID=gene-E3V42_11460;Name=E3V42_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11460 SOQV01000105.1 Protein Homology CDS 33713 34720 . - 0 ID=cds-TMR81943.1;Parent=gene-E3V42_11460;Dbxref=NCBI_GP:TMR81943.1;Name=TMR81943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358390.1;locus_tag=E3V42_11460;product=ATP-dependent 6-phosphofructokinase;protein_id=TMR81943.1;transl_table=11 SOQV01000105.1 Genbank gene 34803 37931 . - . ID=gene-E3V42_11465;Name=E3V42_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11465 SOQV01000105.1 Protein Homology CDS 34803 37931 . - 0 ID=cds-TMR81944.1;Parent=gene-E3V42_11465;Dbxref=NCBI_GP:TMR81944.1;Name=TMR81944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358389.1;locus_tag=E3V42_11465;product=DNA polymerase III subunit alpha;protein_id=TMR81944.1;transl_table=11 ##sequence-region SOQV01000106.1 1 25917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000106.1 Genbank region 1 25917 . + . ID=SOQV01000106.1:1..25917;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000106.1 Genbank gene 360 599 . - . ID=gene-E3V42_11470;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=E3V42_11470 SOQV01000106.1 Protein Homology CDS 360 599 . - 0 ID=cds-TMR81687.1;Parent=gene-E3V42_11470;Dbxref=NCBI_GP:TMR81687.1;Name=TMR81687.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=E3V42_11470;product=30S ribosomal protein S18;protein_id=TMR81687.1;transl_table=11 SOQV01000106.1 Genbank gene 631 1101 . - . ID=gene-E3V42_11475;Name=E3V42_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11475 SOQV01000106.1 Protein Homology CDS 631 1101 . - 0 ID=cds-TMR81688.1;Parent=gene-E3V42_11475;Dbxref=NCBI_GP:TMR81688.1;Name=TMR81688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446624.1;locus_tag=E3V42_11475;product=single-stranded DNA-binding protein;protein_id=TMR81688.1;transl_table=11 SOQV01000106.1 Genbank gene 1113 1403 . - . ID=gene-E3V42_11480;Name=E3V42_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11480 SOQV01000106.1 Protein Homology CDS 1113 1403 . - 0 ID=cds-TMR81689.1;Parent=gene-E3V42_11480;Dbxref=NCBI_GP:TMR81689.1;Name=TMR81689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446625.1;locus_tag=E3V42_11480;product=30S ribosomal protein S6;protein_id=TMR81689.1;transl_table=11 SOQV01000106.1 Genbank gene 1556 2899 . - . ID=gene-E3V42_11485;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=E3V42_11485 SOQV01000106.1 Protein Homology CDS 1556 2899 . - 0 ID=cds-TMR81690.1;Parent=gene-E3V42_11485;Dbxref=NCBI_GP:TMR81690.1;Name=TMR81690.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446627.1;locus_tag=E3V42_11485;product=asparagine--tRNA ligase;protein_id=TMR81690.1;transl_table=11 SOQV01000106.1 Genbank gene 2919 3284 . - . ID=gene-E3V42_11490;Name=E3V42_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11490 SOQV01000106.1 Protein Homology CDS 2919 3284 . - 0 ID=cds-TMR81691.1;Parent=gene-E3V42_11490;Dbxref=NCBI_GP:TMR81691.1;Name=TMR81691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446628.1;locus_tag=E3V42_11490;product=VOC family protein;protein_id=TMR81691.1;transl_table=11 SOQV01000106.1 Genbank gene 3277 4464 . - . ID=gene-E3V42_11495;Name=E3V42_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11495 SOQV01000106.1 Protein Homology CDS 3277 4464 . - 0 ID=cds-TMR81692.1;Parent=gene-E3V42_11495;Dbxref=NCBI_GP:TMR81692.1;Name=TMR81692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446629.1;locus_tag=E3V42_11495;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR81692.1;transl_table=11 SOQV01000106.1 Genbank gene 4461 4892 . - . ID=gene-E3V42_11500;Name=E3V42_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11500 SOQV01000106.1 Protein Homology CDS 4461 4892 . - 0 ID=cds-TMR81712.1;Parent=gene-E3V42_11500;Dbxref=NCBI_GP:TMR81712.1;Name=TMR81712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446630.1;locus_tag=E3V42_11500;product=peptidase;protein_id=TMR81712.1;transl_table=11 SOQV01000106.1 Genbank gene 5207 5755 . + . ID=gene-E3V42_11505;Name=E3V42_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11505 SOQV01000106.1 Protein Homology CDS 5207 5755 . + 0 ID=cds-TMR81693.1;Parent=gene-E3V42_11505;Dbxref=NCBI_GP:TMR81693.1;Name=TMR81693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446632.1;locus_tag=E3V42_11505;product=NAD(P)H-dependent oxidoreductase;protein_id=TMR81693.1;transl_table=11 SOQV01000106.1 Genbank gene 5880 6608 . - . ID=gene-E3V42_11510;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=E3V42_11510 SOQV01000106.1 Protein Homology CDS 5880 6608 . - 0 ID=cds-TMR81694.1;Parent=gene-E3V42_11510;Dbxref=NCBI_GP:TMR81694.1;Name=TMR81694.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446635.1;locus_tag=E3V42_11510;product=peroxide stress protein YaaA;protein_id=TMR81694.1;transl_table=11 SOQV01000106.1 Genbank gene 6755 6934 . - . ID=gene-E3V42_11515;Name=E3V42_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11515 SOQV01000106.1 Protein Homology CDS 6755 6934 . - 0 ID=cds-TMR81695.1;Parent=gene-E3V42_11515;Dbxref=NCBI_GP:TMR81695.1;Name=TMR81695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446642.1;locus_tag=E3V42_11515;product=DUF3953 domain-containing protein;protein_id=TMR81695.1;transl_table=11 SOQV01000106.1 Genbank gene 7131 7310 . - . ID=gene-E3V42_11520;Name=E3V42_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11520 SOQV01000106.1 Protein Homology CDS 7131 7310 . - 0 ID=cds-TMR81696.1;Parent=gene-E3V42_11520;Dbxref=NCBI_GP:TMR81696.1;Name=TMR81696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446642.1;locus_tag=E3V42_11520;product=DUF3953 domain-containing protein;protein_id=TMR81696.1;transl_table=11 SOQV01000106.1 Genbank gene 7474 9069 . - . ID=gene-E3V42_11525;Name=E3V42_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11525 SOQV01000106.1 Protein Homology CDS 7474 9069 . - 0 ID=cds-TMR81697.1;Parent=gene-E3V42_11525;Dbxref=NCBI_GP:TMR81697.1;Name=TMR81697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359000.1;locus_tag=E3V42_11525;product=hypothetical protein;protein_id=TMR81697.1;transl_table=11 SOQV01000106.1 Genbank gene 9081 9491 . - . ID=gene-E3V42_11530;Name=E3V42_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11530 SOQV01000106.1 Protein Homology CDS 9081 9491 . - 0 ID=cds-TMR81698.1;Parent=gene-E3V42_11530;Dbxref=NCBI_GP:TMR81698.1;Name=TMR81698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359001.1;locus_tag=E3V42_11530;product=peptide deformylase;protein_id=TMR81698.1;transl_table=11 SOQV01000106.1 Genbank gene 9752 10549 . - . ID=gene-E3V42_11535;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=E3V42_11535 SOQV01000106.1 Protein Homology CDS 9752 10549 . - 0 ID=cds-TMR81699.1;Parent=gene-E3V42_11535;Dbxref=NCBI_GP:TMR81699.1;Name=TMR81699.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277412.1;locus_tag=E3V42_11535;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=TMR81699.1;transl_table=11 SOQV01000106.1 Genbank gene 10562 13258 . - . ID=gene-E3V42_11540;Name=E3V42_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11540 SOQV01000106.1 Protein Homology CDS 10562 13258 . - 0 ID=cds-TMR81700.1;Parent=gene-E3V42_11540;Dbxref=NCBI_GP:TMR81700.1;Name=TMR81700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359003.1;locus_tag=E3V42_11540;product=cation-translocating P-type ATPase;protein_id=TMR81700.1;transl_table=11 SOQV01000106.1 Genbank gene 13566 14750 . + . ID=gene-E3V42_11545;Name=mntE;gbkey=Gene;gene=mntE;gene_biotype=protein_coding;locus_tag=E3V42_11545 SOQV01000106.1 Protein Homology CDS 13566 14750 . + 0 ID=cds-TMR81701.1;Parent=gene-E3V42_11545;Dbxref=NCBI_GP:TMR81701.1;Name=TMR81701.1;gbkey=CDS;gene=mntE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446646.1;locus_tag=E3V42_11545;product=CDF family manganese efflux transporter MntE;protein_id=TMR81701.1;transl_table=11 SOQV01000106.1 Genbank gene 14787 16658 . - . ID=gene-E3V42_11550;Name=E3V42_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11550 SOQV01000106.1 Protein Homology CDS 14787 16658 . - 0 ID=cds-TMR81702.1;Parent=gene-E3V42_11550;Dbxref=NCBI_GP:TMR81702.1;Name=TMR81702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359005.1;locus_tag=E3V42_11550;product=ABC transporter ATP-binding protein;protein_id=TMR81702.1;transl_table=11 SOQV01000106.1 Genbank gene 16655 17854 . - . ID=gene-E3V42_11555;Name=E3V42_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11555 SOQV01000106.1 Protein Homology CDS 16655 17854 . - 0 ID=cds-TMR81703.1;Parent=gene-E3V42_11555;Dbxref=NCBI_GP:TMR81703.1;Name=TMR81703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446648.1;locus_tag=E3V42_11555;product=CCA tRNA nucleotidyltransferase;protein_id=TMR81703.1;transl_table=11 SOQV01000106.1 Genbank gene 17851 18618 . - . ID=gene-E3V42_11560;Name=E3V42_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11560 SOQV01000106.1 Protein Homology CDS 17851 18618 . - 0 ID=cds-TMR81704.1;Parent=gene-E3V42_11560;Dbxref=NCBI_GP:TMR81704.1;Name=TMR81704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359007.1;locus_tag=E3V42_11560;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=TMR81704.1;transl_table=11 SOQV01000106.1 Genbank gene 18782 19630 . - . ID=gene-E3V42_11565;Name=E3V42_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11565 SOQV01000106.1 Protein Homology CDS 18782 19630 . - 0 ID=cds-TMR81705.1;Parent=gene-E3V42_11565;Dbxref=NCBI_GP:TMR81705.1;Name=TMR81705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359008.1;locus_tag=E3V42_11565;product=DegV family protein;protein_id=TMR81705.1;transl_table=11 SOQV01000106.1 Genbank gene 19632 20006 . - . ID=gene-E3V42_11570;Name=E3V42_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11570 SOQV01000106.1 Protein Homology CDS 19632 20006 . - 0 ID=cds-TMR81706.1;Parent=gene-E3V42_11570;Dbxref=NCBI_GP:TMR81706.1;Name=TMR81706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050081.1;locus_tag=E3V42_11570;product=DUF1149 family protein;protein_id=TMR81706.1;transl_table=11 SOQV01000106.1 Genbank gene 20080 21432 . - . ID=gene-E3V42_11575;Name=E3V42_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11575 SOQV01000106.1 Protein Homology CDS 20080 21432 . - 0 ID=cds-TMR81707.1;Parent=gene-E3V42_11575;Dbxref=NCBI_GP:TMR81707.1;Name=TMR81707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446652.1;locus_tag=E3V42_11575;product=phosphoglucosamine mutase;protein_id=TMR81707.1;transl_table=11 SOQV01000106.1 Genbank gene 21457 22236 . - . ID=gene-E3V42_11580;Name=E3V42_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11580 SOQV01000106.1 Protein Homology CDS 21457 22236 . - 0 ID=cds-TMR81708.1;Parent=gene-E3V42_11580;Dbxref=NCBI_GP:TMR81708.1;Name=TMR81708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359011.1;locus_tag=E3V42_11580;product=hypothetical protein;protein_id=TMR81708.1;transl_table=11 SOQV01000106.1 Genbank gene 22223 23080 . - . ID=gene-E3V42_11585;Name=E3V42_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11585 SOQV01000106.1 Protein Homology CDS 22223 23080 . - 0 ID=cds-TMR81709.1;Parent=gene-E3V42_11585;Dbxref=NCBI_GP:TMR81709.1;Name=TMR81709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446654.1;locus_tag=E3V42_11585;product=TIGR00159 family protein;protein_id=TMR81709.1;transl_table=11 SOQV01000106.1 Genbank pseudogene 22998 23171 . - . ID=gene-E3V42_11590;Name=E3V42_11590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11590;pseudo=true SOQV01000106.1 Protein Homology CDS 22998 23171 . - 0 ID=cds-E3V42_11590;Parent=gene-E3V42_11590;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359013.1;locus_tag=E3V42_11590;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000106.1 Genbank gene 23216 24184 . + . ID=gene-E3V42_11595;Name=E3V42_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11595 SOQV01000106.1 Protein Homology CDS 23216 24184 . + 0 ID=cds-TMR81710.1;Parent=gene-E3V42_11595;Dbxref=NCBI_GP:TMR81710.1;Name=TMR81710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359014.1;locus_tag=E3V42_11595;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=TMR81710.1;transl_table=11 SOQV01000106.1 Genbank gene 24745 24924 . + . ID=gene-E3V42_11600;Name=E3V42_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11600 SOQV01000106.1 Protein Homology CDS 24745 24924 . + 0 ID=cds-TMR81711.1;Parent=gene-E3V42_11600;Dbxref=NCBI_GP:TMR81711.1;Name=TMR81711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209433.1;locus_tag=E3V42_11600;product=hypothetical protein;protein_id=TMR81711.1;transl_table=11 SOQV01000106.1 Genbank gene 25131 25904 . - . ID=gene-E3V42_11605;Name=E3V42_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11605 SOQV01000106.1 Protein Homology CDS 25131 25904 . - 0 ID=cds-TMR81713.1;Parent=gene-E3V42_11605;Dbxref=NCBI_GP:TMR81713.1;Name=TMR81713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860723.1;locus_tag=E3V42_11605;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR81713.1;transl_table=11 ##sequence-region SOQV01000107.1 1 28285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000107.1 Genbank region 1 28285 . + . ID=SOQV01000107.1:1..28285;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000107.1 Genbank pseudogene 438 572 . + . ID=gene-E3V42_11610;Name=E3V42_11610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11610;pseudo=true SOQV01000107.1 Protein Homology CDS 438 572 . + 0 ID=cds-E3V42_11610;Parent=gene-E3V42_11610;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820754.1;locus_tag=E3V42_11610;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000107.1 Genbank gene 781 2196 . - . ID=gene-E3V42_11615;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=E3V42_11615 SOQV01000107.1 Protein Homology CDS 781 2196 . - 0 ID=cds-TMR81657.1;Parent=gene-E3V42_11615;Dbxref=NCBI_GP:TMR81657.1;Name=TMR81657.1;gbkey=CDS;gene=ply;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359331.1;locus_tag=E3V42_11615;product=cholesterol-dependent cytolysin pneumolysin;protein_id=TMR81657.1;transl_table=11 SOQV01000107.1 Genbank gene 2207 2617 . - . ID=gene-E3V42_11620;Name=E3V42_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11620 SOQV01000107.1 Protein Homology CDS 2207 2617 . - 0 ID=cds-TMR81658.1;Parent=gene-E3V42_11620;Dbxref=NCBI_GP:TMR81658.1;Name=TMR81658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359332.1;locus_tag=E3V42_11620;product=hypothetical protein;protein_id=TMR81658.1;transl_table=11 SOQV01000107.1 Genbank gene 2610 3218 . - . ID=gene-E3V42_11625;Name=E3V42_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11625 SOQV01000107.1 Protein Homology CDS 2610 3218 . - 0 ID=cds-TMR81659.1;Parent=gene-E3V42_11625;Dbxref=NCBI_GP:TMR81659.1;Name=TMR81659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359333.1;locus_tag=E3V42_11625;product=hypothetical protein;protein_id=TMR81659.1;transl_table=11 SOQV01000107.1 Genbank gene 3231 3689 . - . ID=gene-E3V42_11630;Name=E3V42_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11630 SOQV01000107.1 Protein Homology CDS 3231 3689 . - 0 ID=cds-TMR81660.1;Parent=gene-E3V42_11630;Dbxref=NCBI_GP:TMR81660.1;Name=TMR81660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186958.1;locus_tag=E3V42_11630;product=DUF4231 domain-containing protein;protein_id=TMR81660.1;transl_table=11 SOQV01000107.1 Genbank gene 4001 6757 . - . ID=gene-E3V42_11635;Name=E3V42_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11635 SOQV01000107.1 Protein Homology CDS 4001 6757 . - 0 ID=cds-TMR81661.1;Parent=gene-E3V42_11635;Dbxref=NCBI_GP:TMR81661.1;Name=TMR81661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399288.1;locus_tag=E3V42_11635;product=YSIRK-type signal peptide-containing protein;protein_id=TMR81661.1;transl_table=11 SOQV01000107.1 Genbank gene 7538 7816 . - . ID=gene-E3V42_11640;Name=E3V42_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11640 SOQV01000107.1 Protein Homology CDS 7538 7816 . - 0 ID=cds-TMR81662.1;Parent=gene-E3V42_11640;Dbxref=NCBI_GP:TMR81662.1;Name=TMR81662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762786.1;locus_tag=E3V42_11640;product=hypothetical protein;protein_id=TMR81662.1;transl_table=11 SOQV01000107.1 Genbank pseudogene 7801 8056 . - . ID=gene-E3V42_11645;Name=E3V42_11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11645;pseudo=true SOQV01000107.1 Protein Homology CDS 7801 8056 . - 0 ID=cds-E3V42_11645;Parent=gene-E3V42_11645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843963.1;locus_tag=E3V42_11645;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000107.1 Genbank gene 8803 9228 . - . ID=gene-E3V42_11650;Name=E3V42_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11650 SOQV01000107.1 Protein Homology CDS 8803 9228 . - 0 ID=cds-TMR81663.1;Parent=gene-E3V42_11650;Dbxref=NCBI_GP:TMR81663.1;Name=TMR81663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204059.1;locus_tag=E3V42_11650;product=hypothetical protein;protein_id=TMR81663.1;transl_table=11 SOQV01000107.1 Genbank gene 9221 9835 . - . ID=gene-E3V42_11655;Name=E3V42_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11655 SOQV01000107.1 Protein Homology CDS 9221 9835 . - 0 ID=cds-TMR81682.1;Parent=gene-E3V42_11655;Dbxref=NCBI_GP:TMR81682.1;Name=TMR81682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236771.1;locus_tag=E3V42_11655;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR81682.1;transl_table=11 SOQV01000107.1 Genbank gene 9980 10324 . - . ID=gene-E3V42_11660;Name=E3V42_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11660 SOQV01000107.1 Protein Homology CDS 9980 10324 . - 0 ID=cds-TMR81664.1;Parent=gene-E3V42_11660;Dbxref=NCBI_GP:TMR81664.1;Name=TMR81664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056000.1;locus_tag=E3V42_11660;product=XRE family transcriptional regulator;protein_id=TMR81664.1;transl_table=11 SOQV01000107.1 Genbank gene 10695 11645 . - . ID=gene-E3V42_11665;Name=E3V42_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11665 SOQV01000107.1 Protein Homology CDS 10695 11645 . - 0 ID=cds-TMR81665.1;Parent=gene-E3V42_11665;Dbxref=NCBI_GP:TMR81665.1;Name=TMR81665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=E3V42_11665;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR81665.1;transl_table=11 SOQV01000107.1 Genbank gene 12020 13390 . - . ID=gene-E3V42_11670;Name=E3V42_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11670 SOQV01000107.1 Protein Homology CDS 12020 13390 . - 0 ID=cds-TMR81666.1;Parent=gene-E3V42_11670;Dbxref=NCBI_GP:TMR81666.1;Name=TMR81666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446938.1;locus_tag=E3V42_11670;product=MATE family efflux transporter;protein_id=TMR81666.1;transl_table=11 SOQV01000107.1 Genbank gene 13505 14671 . - . ID=gene-E3V42_11675;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=E3V42_11675 SOQV01000107.1 Protein Homology CDS 13505 14671 . - 0 ID=cds-TMR81667.1;Parent=gene-E3V42_11675;Dbxref=NCBI_GP:TMR81667.1;Name=TMR81667.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359349.1;locus_tag=E3V42_11675;product=recombinase RecA;protein_id=TMR81667.1;transl_table=11 SOQV01000107.1 Genbank gene 14726 15982 . - . ID=gene-E3V42_11680;Name=E3V42_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11680 SOQV01000107.1 Protein Homology CDS 14726 15982 . - 0 ID=cds-TMR81668.1;Parent=gene-E3V42_11680;Dbxref=NCBI_GP:TMR81668.1;Name=TMR81668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446940.1;locus_tag=E3V42_11680;product=competence/damage-inducible protein A;protein_id=TMR81668.1;transl_table=11 SOQV01000107.1 Genbank gene 16066 17082 . - . ID=gene-E3V42_11685;Name=E3V42_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11685 SOQV01000107.1 Protein Homology CDS 16066 17082 . - 0 ID=cds-TMR81669.1;Parent=gene-E3V42_11685;Dbxref=NCBI_GP:TMR81669.1;Name=TMR81669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359351.1;locus_tag=E3V42_11685;product=LytR family transcriptional regulator;protein_id=TMR81669.1;transl_table=11 SOQV01000107.1 Genbank gene 17090 17608 . - . ID=gene-E3V42_11690;Name=E3V42_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11690 SOQV01000107.1 Protein Homology CDS 17090 17608 . - 0 ID=cds-TMR81670.1;Parent=gene-E3V42_11690;Dbxref=NCBI_GP:TMR81670.1;Name=TMR81670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446942.1;locus_tag=E3V42_11690;product=GNAT family N-acetyltransferase;protein_id=TMR81670.1;transl_table=11 SOQV01000107.1 Genbank gene 17598 18041 . - . ID=gene-E3V42_11695;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=E3V42_11695 SOQV01000107.1 Protein Homology CDS 17598 18041 . - 0 ID=cds-TMR81671.1;Parent=gene-E3V42_11695;Dbxref=NCBI_GP:TMR81671.1;Name=TMR81671.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446943.1;locus_tag=E3V42_11695;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=TMR81671.1;transl_table=11 SOQV01000107.1 Genbank gene 18231 18851 . - . ID=gene-E3V42_11700;Name=E3V42_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11700 SOQV01000107.1 Protein Homology CDS 18231 18851 . - 0 ID=cds-TMR81672.1;Parent=gene-E3V42_11700;Dbxref=NCBI_GP:TMR81672.1;Name=TMR81672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359354.1;locus_tag=E3V42_11700;product=hypothetical protein;protein_id=TMR81672.1;transl_table=11 SOQV01000107.1 Genbank gene 18982 19068 . - . ID=gene-E3V42_11705;Name=E3V42_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11705 SOQV01000107.1 Protein Homology CDS 18982 19068 . - 0 ID=cds-TMR81683.1;Parent=gene-E3V42_11705;Dbxref=NCBI_GP:TMR81683.1;Name=TMR81683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_11705;product=DNA alkylation repair protein;protein_id=TMR81683.1;transl_table=11 SOQV01000107.1 Genbank gene 19169 19561 . - . ID=gene-E3V42_11710;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=E3V42_11710 SOQV01000107.1 Protein Homology CDS 19169 19561 . - 0 ID=cds-TMR81673.1;Parent=gene-E3V42_11710;Dbxref=NCBI_GP:TMR81673.1;Name=TMR81673.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=E3V42_11710;product=30S ribosomal protein S9;protein_id=TMR81673.1;transl_table=11 SOQV01000107.1 Genbank gene 19581 20027 . - . ID=gene-E3V42_11715;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=E3V42_11715 SOQV01000107.1 Protein Homology CDS 19581 20027 . - 0 ID=cds-TMR81674.1;Parent=gene-E3V42_11715;Dbxref=NCBI_GP:TMR81674.1;Name=TMR81674.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357865.1;locus_tag=E3V42_11715;product=50S ribosomal protein L13;protein_id=TMR81674.1;transl_table=11 SOQV01000107.1 Genbank gene 20382 20699 . + . ID=gene-E3V42_11720;Name=E3V42_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11720 SOQV01000107.1 Protein Homology CDS 20382 20699 . + 0 ID=cds-TMR81675.1;Parent=gene-E3V42_11720;Dbxref=NCBI_GP:TMR81675.1;Name=TMR81675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445423.1;locus_tag=E3V42_11720;product=GTP cyclohydrolase;protein_id=TMR81675.1;transl_table=11 SOQV01000107.1 Genbank gene 20905 21717 . - . ID=gene-E3V42_11725;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=E3V42_11725 SOQV01000107.1 Protein Homology CDS 20905 21717 . - 0 ID=cds-TMR81676.1;Parent=gene-E3V42_11725;Dbxref=NCBI_GP:TMR81676.1;Name=TMR81676.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445422.1;locus_tag=E3V42_11725;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=TMR81676.1;transl_table=11 SOQV01000107.1 Genbank gene 21876 22430 . - . ID=gene-E3V42_11730;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=E3V42_11730 SOQV01000107.1 Protein Homology CDS 21876 22430 . - 0 ID=cds-TMR81684.1;Parent=gene-E3V42_11730;Dbxref=NCBI_GP:TMR81684.1;Name=TMR81684.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357862.1;locus_tag=E3V42_11730;product=GTP cyclohydrolase I FolE;protein_id=TMR81684.1;transl_table=11 SOQV01000107.1 Genbank gene 22411 23733 . - . ID=gene-E3V42_11735;Name=E3V42_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11735 SOQV01000107.1 Protein Homology CDS 22411 23733 . - 0 ID=cds-TMR81677.1;Parent=gene-E3V42_11735;Dbxref=NCBI_GP:TMR81677.1;Name=TMR81677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357861.1;locus_tag=E3V42_11735;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMR81677.1;transl_table=11 SOQV01000107.1 Genbank gene 23735 24679 . - . ID=gene-E3V42_11740;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=E3V42_11740 SOQV01000107.1 Protein Homology CDS 23735 24679 . - 0 ID=cds-TMR81685.1;Parent=gene-E3V42_11740;Dbxref=NCBI_GP:TMR81685.1;Name=TMR81685.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445419.1;locus_tag=E3V42_11740;product=dihydropteroate synthase;protein_id=TMR81685.1;transl_table=11 SOQV01000107.1 Genbank gene 24803 25513 . - . ID=gene-E3V42_11745;Name=E3V42_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11745 SOQV01000107.1 Protein Homology CDS 24803 25513 . - 0 ID=cds-TMR81678.1;Parent=gene-E3V42_11745;Dbxref=NCBI_GP:TMR81678.1;Name=TMR81678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445418.1;locus_tag=E3V42_11745;product=CPBP family intramembrane metalloprotease;protein_id=TMR81678.1;transl_table=11 SOQV01000107.1 Genbank gene 25563 26981 . - . ID=gene-E3V42_11750;Name=E3V42_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11750 SOQV01000107.1 Protein Homology CDS 25563 26981 . - 0 ID=cds-TMR81679.1;Parent=gene-E3V42_11750;Dbxref=NCBI_GP:TMR81679.1;Name=TMR81679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445417.1;locus_tag=E3V42_11750;product=NCS2 family permease;protein_id=TMR81679.1;transl_table=11 SOQV01000107.1 Genbank gene 27171 27983 . + . ID=gene-E3V42_11755;Name=E3V42_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11755 SOQV01000107.1 Protein Homology CDS 27171 27983 . + 0 ID=cds-TMR81680.1;Parent=gene-E3V42_11755;Dbxref=NCBI_GP:TMR81680.1;Name=TMR81680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357857.1;locus_tag=E3V42_11755;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR81680.1;transl_table=11 SOQV01000107.1 Genbank gene 28019 28111 . - . ID=gene-E3V42_11760;Name=E3V42_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11760 SOQV01000107.1 Protein Homology CDS 28019 28111 . - 0 ID=cds-TMR81686.1;Parent=gene-E3V42_11760;Dbxref=NCBI_GP:TMR81686.1;Name=TMR81686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_11760;product=DNA alkylation repair protein;protein_id=TMR81686.1;transl_table=11 SOQV01000107.1 Genbank gene 28163 28285 . - . ID=gene-E3V42_11765;Name=E3V42_11765;end_range=28285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11765;partial=true SOQV01000107.1 Protein Homology CDS 28163 28285 . - 0 ID=cds-TMR81681.1;Parent=gene-E3V42_11765;Dbxref=NCBI_GP:TMR81681.1;Name=TMR81681.1;end_range=28285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_11765;partial=true;product=IS630 family transposase;protein_id=TMR81681.1;transl_table=11 ##sequence-region SOQV01000108.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000108.1 Genbank region 1 526 . + . ID=SOQV01000108.1:1..526;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000108.1 Genbank gene 47 232 . + . ID=gene-E3V42_11770;Name=E3V42_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11770 SOQV01000108.1 Protein Homology CDS 47 232 . + 0 ID=cds-TMR81632.1;Parent=gene-E3V42_11770;Dbxref=NCBI_GP:TMR81632.1;Name=TMR81632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=E3V42_11770;product=hypothetical protein;protein_id=TMR81632.1;transl_table=11 SOQV01000108.1 Genbank gene 213 526 . + . ID=gene-E3V42_11775;Name=tnpB;end_range=526,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=E3V42_11775;partial=true SOQV01000108.1 Protein Homology CDS 213 526 . + 0 ID=cds-TMR81633.1;Parent=gene-E3V42_11775;Dbxref=NCBI_GP:TMR81633.1;Name=TMR81633.1;end_range=526,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V42_11775;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR81633.1;transl_table=11 ##sequence-region SOQV01000109.1 1 4241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000109.1 Genbank region 1 4241 . + . ID=SOQV01000109.1:1..4241;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000109.1 Genbank gene 449 4241 . - . ID=gene-E3V42_11780;Name=E3V42_11780;end_range=4241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11780;partial=true SOQV01000109.1 Protein Homology CDS 449 4241 . - 1 ID=cds-TMR81630.1;Parent=gene-E3V42_11780;Dbxref=NCBI_GP:TMR81630.1;Name=TMR81630.1;end_range=4241,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_11780;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR81630.1;transl_table=11 ##sequence-region SOQV01000011.1 1 31035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000011.1 Genbank region 1 31035 . + . ID=SOQV01000011.1:1..31035;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000011.1 Genbank gene 196 450 . + . ID=gene-E3V42_00990;Name=E3V42_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00990 SOQV01000011.1 Protein Homology CDS 196 450 . + 0 ID=cds-TMR85354.1;Parent=gene-E3V42_00990;Dbxref=NCBI_GP:TMR85354.1;Name=TMR85354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553826.1;locus_tag=E3V42_00990;product=hypothetical protein;protein_id=TMR85354.1;transl_table=11 SOQV01000011.1 Genbank gene 596 1666 . + . ID=gene-E3V42_00995;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=E3V42_00995 SOQV01000011.1 Protein Homology CDS 596 1666 . + 0 ID=cds-TMR85355.1;Parent=gene-E3V42_00995;Dbxref=NCBI_GP:TMR85355.1;Name=TMR85355.1;gbkey=CDS;gene=xerS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446171.1;locus_tag=E3V42_00995;product=tyrosine recombinase XerS;protein_id=TMR85355.1;transl_table=11 SOQV01000011.1 Genbank gene 1880 3232 . - . ID=gene-E3V42_01000;Name=pdrM;gbkey=Gene;gene=pdrM;gene_biotype=protein_coding;locus_tag=E3V42_01000 SOQV01000011.1 Protein Homology CDS 1880 3232 . - 0 ID=cds-TMR85356.1;Parent=gene-E3V42_01000;Dbxref=NCBI_GP:TMR85356.1;Name=TMR85356.1;gbkey=CDS;gene=pdrM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446170.1;locus_tag=E3V42_01000;product=sodium-coupled multidrug efflux MATE transporter PdrM;protein_id=TMR85356.1;transl_table=11 SOQV01000011.1 Genbank gene 3243 3503 . - . ID=gene-E3V42_01005;Name=E3V42_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01005 SOQV01000011.1 Protein Homology CDS 3243 3503 . - 0 ID=cds-TMR85357.1;Parent=gene-E3V42_01005;Dbxref=NCBI_GP:TMR85357.1;Name=TMR85357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398086.1;locus_tag=E3V42_01005;product=hypothetical protein;protein_id=TMR85357.1;transl_table=11 SOQV01000011.1 Genbank gene 3517 4785 . - . ID=gene-E3V42_01010;Name=E3V42_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01010 SOQV01000011.1 Protein Homology CDS 3517 4785 . - 0 ID=cds-TMR85358.1;Parent=gene-E3V42_01010;Dbxref=NCBI_GP:TMR85358.1;Name=TMR85358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358647.1;locus_tag=E3V42_01010;product=dihydroorotase;protein_id=TMR85358.1;transl_table=11 SOQV01000011.1 Genbank gene 4798 5262 . - . ID=gene-E3V42_01015;Name=E3V42_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01015 SOQV01000011.1 Protein Homology CDS 4798 5262 . - 0 ID=cds-TMR85359.1;Parent=gene-E3V42_01015;Dbxref=NCBI_GP:TMR85359.1;Name=TMR85359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446168.1;locus_tag=E3V42_01015;product=8-oxo-dGTP diphosphatase;protein_id=TMR85359.1;transl_table=11 SOQV01000011.1 Genbank gene 5272 5925 . - . ID=gene-E3V42_01020;Name=E3V42_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01020 SOQV01000011.1 Protein Homology CDS 5272 5925 . - 0 ID=cds-TMR85360.1;Parent=gene-E3V42_01020;Dbxref=NCBI_GP:TMR85360.1;Name=TMR85360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446167.1;locus_tag=E3V42_01020;product=uracil-DNA glycosylase;protein_id=TMR85360.1;transl_table=11 SOQV01000011.1 Genbank gene 5987 6679 . - . ID=gene-E3V42_01025;Name=E3V42_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01025 SOQV01000011.1 Protein Homology CDS 5987 6679 . - 0 ID=cds-TMR85361.1;Parent=gene-E3V42_01025;Dbxref=NCBI_GP:TMR85361.1;Name=TMR85361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446166.1;locus_tag=E3V42_01025;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=TMR85361.1;transl_table=11 SOQV01000011.1 Genbank gene 6798 7010 . - . ID=gene-E3V42_01030;Name=E3V42_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01030 SOQV01000011.1 Protein Homology CDS 6798 7010 . - 0 ID=cds-TMR85386.1;Parent=gene-E3V42_01030;Dbxref=NCBI_GP:TMR85386.1;Name=TMR85386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014185.1;locus_tag=E3V42_01030;product=hypothetical protein;protein_id=TMR85386.1;transl_table=11 SOQV01000011.1 Genbank gene 7059 7271 . - . ID=gene-E3V42_01035;Name=E3V42_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01035 SOQV01000011.1 Protein Homology CDS 7059 7271 . - 0 ID=cds-TMR85362.1;Parent=gene-E3V42_01035;Dbxref=NCBI_GP:TMR85362.1;Name=TMR85362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989849.1;locus_tag=E3V42_01035;product=hypothetical protein;protein_id=TMR85362.1;transl_table=11 SOQV01000011.1 Genbank gene 7383 7562 . - . ID=gene-E3V42_01040;Name=E3V42_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01040 SOQV01000011.1 Protein Homology CDS 7383 7562 . - 0 ID=cds-TMR85363.1;Parent=gene-E3V42_01040;Dbxref=NCBI_GP:TMR85363.1;Name=TMR85363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475581.1;locus_tag=E3V42_01040;product=hypothetical protein;protein_id=TMR85363.1;transl_table=11 SOQV01000011.1 Genbank gene 7774 8676 . - . ID=gene-E3V42_01045;Name=E3V42_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01045 SOQV01000011.1 Protein Homology CDS 7774 8676 . - 0 ID=cds-TMR85364.1;Parent=gene-E3V42_01045;Dbxref=NCBI_GP:TMR85364.1;Name=TMR85364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357711.1;locus_tag=E3V42_01045;product=hypothetical protein;protein_id=TMR85364.1;transl_table=11 SOQV01000011.1 Genbank gene 8839 9570 . - . ID=gene-E3V42_01050;Name=E3V42_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01050 SOQV01000011.1 Protein Homology CDS 8839 9570 . - 0 ID=cds-TMR85365.1;Parent=gene-E3V42_01050;Dbxref=NCBI_GP:TMR85365.1;Name=TMR85365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866696.1;locus_tag=E3V42_01050;product=hypothetical protein;protein_id=TMR85365.1;transl_table=11 SOQV01000011.1 Genbank gene 10203 10577 . - . ID=gene-E3V42_01055;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=E3V42_01055 SOQV01000011.1 Protein Homology CDS 10203 10577 . - 0 ID=cds-TMR85366.1;Parent=gene-E3V42_01055;Dbxref=NCBI_GP:TMR85366.1;Name=TMR85366.1;gbkey=CDS;gene=dhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_688643.1;locus_tag=E3V42_01055;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=TMR85366.1;transl_table=11 SOQV01000011.1 Genbank gene 10577 11152 . - . ID=gene-E3V42_01060;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=E3V42_01060 SOQV01000011.1 Protein Homology CDS 10577 11152 . - 0 ID=cds-TMR85367.1;Parent=gene-E3V42_01060;Dbxref=NCBI_GP:TMR85367.1;Name=TMR85367.1;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446164.1;locus_tag=E3V42_01060;product=dihydroxyacetone kinase subunit L;protein_id=TMR85367.1;transl_table=11 SOQV01000011.1 Genbank gene 11174 12163 . - . ID=gene-E3V42_01065;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=E3V42_01065 SOQV01000011.1 Protein Homology CDS 11174 12163 . - 0 ID=cds-TMR85368.1;Parent=gene-E3V42_01065;Dbxref=NCBI_GP:TMR85368.1;Name=TMR85368.1;gbkey=CDS;gene=dhaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446163.1;locus_tag=E3V42_01065;product=dihydroxyacetone kinase subunit DhaK;protein_id=TMR85368.1;transl_table=11 SOQV01000011.1 Genbank gene 12317 12847 . + . ID=gene-E3V42_01070;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=E3V42_01070 SOQV01000011.1 Protein Homology CDS 12317 12847 . + 0 ID=cds-TMR85369.1;Parent=gene-E3V42_01070;Dbxref=NCBI_GP:TMR85369.1;Name=TMR85369.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446162.1;locus_tag=E3V42_01070;product=dihydroxyacetone kinase transcriptional activator DhaS;protein_id=TMR85369.1;transl_table=11 SOQV01000011.1 Genbank gene 12844 13833 . + . ID=gene-E3V42_01075;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=E3V42_01075 SOQV01000011.1 Protein Homology CDS 12844 13833 . + 0 ID=cds-TMR85370.1;Parent=gene-E3V42_01075;Dbxref=NCBI_GP:TMR85370.1;Name=TMR85370.1;gbkey=CDS;gene=dhaQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446161.1;locus_tag=E3V42_01075;product=DhaKLM operon coactivator DhaQ;protein_id=TMR85370.1;transl_table=11 SOQV01000011.1 Genbank gene 14104 15837 . - . ID=gene-E3V42_01080;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=E3V42_01080 SOQV01000011.1 Protein Homology CDS 14104 15837 . - 0 ID=cds-TMR85371.1;Parent=gene-E3V42_01080;Dbxref=NCBI_GP:TMR85371.1;Name=TMR85371.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446158.1;locus_tag=E3V42_01080;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=TMR85371.1;transl_table=11 SOQV01000011.1 Genbank gene 15843 16106 . - . ID=gene-E3V42_01085;Name=E3V42_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01085 SOQV01000011.1 Protein Homology CDS 15843 16106 . - 0 ID=cds-TMR85372.1;Parent=gene-E3V42_01085;Dbxref=NCBI_GP:TMR85372.1;Name=TMR85372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=E3V42_01085;product=phosphocarrier protein HPr;protein_id=TMR85372.1;transl_table=11 SOQV01000011.1 Genbank gene 16457 16675 . + . ID=gene-E3V42_01090;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=E3V42_01090 SOQV01000011.1 Protein Homology CDS 16457 16675 . + 0 ID=cds-TMR85373.1;Parent=gene-E3V42_01090;Dbxref=NCBI_GP:TMR85373.1;Name=TMR85373.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446156.1;locus_tag=E3V42_01090;product=glutaredoxin-like protein NrdH;protein_id=TMR85373.1;transl_table=11 SOQV01000011.1 Genbank gene 16756 18915 . + . ID=gene-E3V42_01095;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=E3V42_01095 SOQV01000011.1 Protein Homology CDS 16756 18915 . + 0 ID=cds-TMR85374.1;Parent=gene-E3V42_01095;Dbxref=NCBI_GP:TMR85374.1;Name=TMR85374.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=E3V42_01095;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=TMR85374.1;transl_table=11 SOQV01000011.1 Genbank gene 19102 20064 . + . ID=gene-E3V42_01100;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=E3V42_01100 SOQV01000011.1 Protein Homology CDS 19102 20064 . + 0 ID=cds-TMR85375.1;Parent=gene-E3V42_01100;Dbxref=NCBI_GP:TMR85375.1;Name=TMR85375.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358660.1;locus_tag=E3V42_01100;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=TMR85375.1;transl_table=11 SOQV01000011.1 Genbank gene 20398 21159 . + . ID=gene-E3V42_01105;Name=E3V42_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01105 SOQV01000011.1 Protein Homology CDS 20398 21159 . + 0 ID=cds-TMR85376.1;Parent=gene-E3V42_01105;Dbxref=NCBI_GP:TMR85376.1;Name=TMR85376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358661.1;locus_tag=E3V42_01105;product=DeoR/GlpR transcriptional regulator;protein_id=TMR85376.1;transl_table=11 SOQV01000011.1 Genbank gene 21444 21701 . - . ID=gene-E3V42_01110;Name=E3V42_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01110 SOQV01000011.1 Protein Homology CDS 21444 21701 . - 0 ID=cds-TMR85377.1;Parent=gene-E3V42_01110;Dbxref=NCBI_GP:TMR85377.1;Name=TMR85377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446152.1;locus_tag=E3V42_01110;product=DUF3884 family protein;protein_id=TMR85377.1;transl_table=11 SOQV01000011.1 Genbank gene 21743 23149 . - . ID=gene-E3V42_01115;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=E3V42_01115 SOQV01000011.1 Protein Homology CDS 21743 23149 . - 0 ID=cds-TMR85378.1;Parent=gene-E3V42_01115;Dbxref=NCBI_GP:TMR85378.1;Name=TMR85378.1;gbkey=CDS;gene=lacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358662.1;locus_tag=E3V42_01115;product=6-phospho-beta-galactosidase;protein_id=TMR85378.1;transl_table=11 SOQV01000011.1 Genbank gene 23353 25044 . - . ID=gene-E3V42_01120;Name=E3V42_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01120 SOQV01000011.1 Protein Homology CDS 23353 25044 . - 0 ID=cds-TMR85379.1;Parent=gene-E3V42_01120;Dbxref=NCBI_GP:TMR85379.1;Name=TMR85379.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358663.1;locus_tag=E3V42_01120;product=PTS lactose transporter subunit IIBC;protein_id=TMR85379.1;transl_table=11 SOQV01000011.1 Genbank gene 25044 25361 . - . ID=gene-E3V42_01125;Name=E3V42_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01125 SOQV01000011.1 Protein Homology CDS 25044 25361 . - 0 ID=cds-TMR85380.1;Parent=gene-E3V42_01125;Dbxref=NCBI_GP:TMR85380.1;Name=TMR85380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358664.1;locus_tag=E3V42_01125;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=TMR85380.1;transl_table=11 SOQV01000011.1 Genbank gene 25396 26232 . - . ID=gene-E3V42_01130;Name=E3V42_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01130 SOQV01000011.1 Protein Homology CDS 25396 26232 . - 0 ID=cds-TMR85381.1;Parent=gene-E3V42_01130;Dbxref=NCBI_GP:TMR85381.1;Name=TMR85381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446148.1;locus_tag=E3V42_01130;product=transcription antiterminator;protein_id=TMR85381.1;transl_table=11 SOQV01000011.1 Genbank gene 26628 27104 . - . ID=gene-E3V42_01135;Name=E3V42_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01135 SOQV01000011.1 Protein Homology CDS 26628 27104 . - 0 ID=cds-TMR85387.1;Parent=gene-E3V42_01135;Dbxref=NCBI_GP:TMR85387.1;Name=TMR85387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001849973.1;locus_tag=E3V42_01135;product=hypothetical protein;protein_id=TMR85387.1;transl_table=11 SOQV01000011.1 Genbank gene 27503 28483 . - . ID=gene-E3V42_01140;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=E3V42_01140 SOQV01000011.1 Protein Homology CDS 27503 28483 . - 0 ID=cds-TMR85382.1;Parent=gene-E3V42_01140;Dbxref=NCBI_GP:TMR85382.1;Name=TMR85382.1;gbkey=CDS;gene=lacD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446141.1;locus_tag=E3V42_01140;product=tagatose-bisphosphate aldolase;protein_id=TMR85382.1;transl_table=11 SOQV01000011.1 Genbank gene 28485 29414 . - . ID=gene-E3V42_01145;Name=E3V42_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01145 SOQV01000011.1 Protein Homology CDS 28485 29414 . - 0 ID=cds-TMR85383.1;Parent=gene-E3V42_01145;Dbxref=NCBI_GP:TMR85383.1;Name=TMR85383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446140.1;locus_tag=E3V42_01145;product=tagatose-6-phosphate kinase;protein_id=TMR85383.1;transl_table=11 SOQV01000011.1 Genbank gene 29425 29940 . - . ID=gene-E3V42_01150;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=E3V42_01150 SOQV01000011.1 Protein Homology CDS 29425 29940 . - 0 ID=cds-TMR85384.1;Parent=gene-E3V42_01150;Dbxref=NCBI_GP:TMR85384.1;Name=TMR85384.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358668.1;locus_tag=E3V42_01150;product=galactose-6-phosphate isomerase subunit LacB;protein_id=TMR85384.1;transl_table=11 SOQV01000011.1 Genbank gene 30089 30514 . - . ID=gene-E3V42_01155;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=E3V42_01155 SOQV01000011.1 Protein Homology CDS 30089 30514 . - 0 ID=cds-TMR85385.1;Parent=gene-E3V42_01155;Dbxref=NCBI_GP:TMR85385.1;Name=TMR85385.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446138.1;locus_tag=E3V42_01155;product=galactose-6-phosphate isomerase subunit LacA;protein_id=TMR85385.1;transl_table=11 SOQV01000011.1 Genbank pseudogene 30672 30755 . - . ID=gene-E3V42_01160;Name=E3V42_01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01160;pseudo=true SOQV01000011.1 Protein Homology CDS 30672 30755 . - 0 ID=cds-E3V42_01160;Parent=gene-E3V42_01160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883906.1;locus_tag=E3V42_01160;product=aldose epimerase;pseudo=true;transl_table=11 ##sequence-region SOQV01000110.1 1 24568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000110.1 Genbank region 1 24568 . + . ID=SOQV01000110.1:1..24568;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000110.1 Genbank pseudogene 1 273 . + . ID=gene-E3V42_11785;Name=E3V42_11785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11785;pseudo=true SOQV01000110.1 Protein Homology CDS 1 273 . + 0 ID=cds-E3V42_11785;Parent=gene-E3V42_11785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_11785;product=transposase;pseudo=true;transl_table=11 SOQV01000110.1 Genbank pseudogene 376 483 . + . ID=gene-E3V42_11790;Name=E3V42_11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11790;pseudo=true SOQV01000110.1 Protein Homology CDS 376 483 . + 0 ID=cds-E3V42_11790;Parent=gene-E3V42_11790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_11790;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000110.1 Genbank gene 516 1343 . + . ID=gene-E3V42_11795;Name=E3V42_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11795 SOQV01000110.1 Protein Homology CDS 516 1343 . + 0 ID=cds-TMR81563.1;Parent=gene-E3V42_11795;Dbxref=NCBI_GP:TMR81563.1;Name=TMR81563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446477.1;locus_tag=E3V42_11795;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR81563.1;transl_table=11 SOQV01000110.1 Genbank pseudogene 1393 1727 . + . ID=gene-E3V42_11800;Name=E3V42_11800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11800;pseudo=true SOQV01000110.1 Protein Homology CDS 1393 1727 . + 0 ID=cds-E3V42_11800;Parent=gene-E3V42_11800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446476.1;locus_tag=E3V42_11800;product=1-alkyl-2-acetylglycerophosphocholine esterase;pseudo=true;transl_table=11 SOQV01000110.1 Genbank pseudogene 1761 3087 . - . ID=gene-E3V42_11805;Name=E3V42_11805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11805;pseudo=true SOQV01000110.1 Protein Homology CDS 1761 3087 . - 0 ID=cds-E3V42_11805;Parent=gene-E3V42_11805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V42_11805;product=transposase;pseudo=true;transl_table=11 SOQV01000110.1 Genbank gene 3111 3293 . + . ID=gene-E3V42_11810;Name=E3V42_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11810 SOQV01000110.1 Protein Homology CDS 3111 3293 . + 0 ID=cds-TMR81564.1;Parent=gene-E3V42_11810;Dbxref=NCBI_GP:TMR81564.1;Name=TMR81564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446476.1;locus_tag=E3V42_11810;product=DNA polymerase IV;protein_id=TMR81564.1;transl_table=11 SOQV01000110.1 Genbank gene 3377 4102 . + . ID=gene-E3V42_11815;Name=E3V42_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11815 SOQV01000110.1 Protein Homology CDS 3377 4102 . + 0 ID=cds-TMR81565.1;Parent=gene-E3V42_11815;Dbxref=NCBI_GP:TMR81565.1;Name=TMR81565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446454.1;locus_tag=E3V42_11815;product=proteinase;protein_id=TMR81565.1;transl_table=11 SOQV01000110.1 Genbank gene 4099 5034 . + . ID=gene-E3V42_11820;Name=E3V42_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11820 SOQV01000110.1 Protein Homology CDS 4099 5034 . + 0 ID=cds-TMR81566.1;Parent=gene-E3V42_11820;Dbxref=NCBI_GP:TMR81566.1;Name=TMR81566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446453.1;locus_tag=E3V42_11820;product=class A beta-lactamase-related serine hydrolase;protein_id=TMR81566.1;transl_table=11 SOQV01000110.1 Genbank gene 5043 5939 . + . ID=gene-E3V42_11825;Name=E3V42_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11825 SOQV01000110.1 Protein Homology CDS 5043 5939 . + 0 ID=cds-TMR81567.1;Parent=gene-E3V42_11825;Dbxref=NCBI_GP:TMR81567.1;Name=TMR81567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446452.1;locus_tag=E3V42_11825;product=EamA family transporter;protein_id=TMR81567.1;transl_table=11 SOQV01000110.1 Genbank gene 6089 6787 . - . ID=gene-E3V42_11830;Name=E3V42_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11830 SOQV01000110.1 Protein Homology CDS 6089 6787 . - 0 ID=cds-TMR81568.1;Parent=gene-E3V42_11830;Dbxref=NCBI_GP:TMR81568.1;Name=TMR81568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446451.1;locus_tag=E3V42_11830;product=GntR family transcriptional regulator;protein_id=TMR81568.1;transl_table=11 SOQV01000110.1 Genbank gene 7042 8604 . + . ID=gene-E3V42_11835;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=E3V42_11835 SOQV01000110.1 Protein Homology CDS 7042 8604 . + 0 ID=cds-TMR81569.1;Parent=gene-E3V42_11835;Dbxref=NCBI_GP:TMR81569.1;Name=TMR81569.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446450.1;locus_tag=E3V42_11835;product=glutamine-hydrolyzing GMP synthase;protein_id=TMR81569.1;transl_table=11 SOQV01000110.1 Genbank gene 8774 9985 . + . ID=gene-E3V42_11840;Name=E3V42_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11840 SOQV01000110.1 Protein Homology CDS 8774 9985 . + 0 ID=cds-TMR81570.1;Parent=gene-E3V42_11840;Dbxref=NCBI_GP:TMR81570.1;Name=TMR81570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015926228.1;locus_tag=E3V42_11840;product=type II restriction endonuclease;protein_id=TMR81570.1;transl_table=11 SOQV01000110.1 Genbank gene 10015 11130 . - . ID=gene-E3V42_11845;Name=E3V42_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11845 SOQV01000110.1 Protein Homology CDS 10015 11130 . - 0 ID=cds-TMR81571.1;Parent=gene-E3V42_11845;Dbxref=NCBI_GP:TMR81571.1;Name=TMR81571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016476470.1;locus_tag=E3V42_11845;product=DNA cytosine methyltransferase;protein_id=TMR81571.1;transl_table=11 SOQV01000110.1 Genbank gene 11619 12905 . + . ID=gene-E3V42_11850;Name=E3V42_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11850 SOQV01000110.1 Protein Homology CDS 11619 12905 . + 0 ID=cds-TMR81572.1;Parent=gene-E3V42_11850;Dbxref=NCBI_GP:TMR81572.1;Name=TMR81572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446424.1;locus_tag=E3V42_11850;product=U32 family peptidase;protein_id=TMR81572.1;transl_table=11 SOQV01000110.1 Genbank gene 13289 14134 . + . ID=gene-E3V42_11855;Name=E3V42_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11855 SOQV01000110.1 Protein Homology CDS 13289 14134 . + 0 ID=cds-TMR81573.1;Parent=gene-E3V42_11855;Dbxref=NCBI_GP:TMR81573.1;Name=TMR81573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452046.1;locus_tag=E3V42_11855;product=ABC transporter ATP-binding protein;protein_id=TMR81573.1;transl_table=11 SOQV01000110.1 Genbank pseudogene 14150 14871 . + . ID=gene-E3V42_11860;Name=E3V42_11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11860;pseudo=true SOQV01000110.1 Protein Homology CDS 14150 14871 . + 0 ID=cds-E3V42_11860;Parent=gene-E3V42_11860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358873.1;locus_tag=E3V42_11860;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000110.1 Genbank gene 15227 15466 . + . ID=gene-E3V42_11865;Name=E3V42_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11865 SOQV01000110.1 Protein Homology CDS 15227 15466 . + 0 ID=cds-TMR81574.1;Parent=gene-E3V42_11865;Dbxref=NCBI_GP:TMR81574.1;Name=TMR81574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358872.1;locus_tag=E3V42_11865;product=transcriptional regulator;protein_id=TMR81574.1;transl_table=11 SOQV01000110.1 Genbank gene 15456 15944 . + . ID=gene-E3V42_11870;Name=E3V42_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11870 SOQV01000110.1 Protein Homology CDS 15456 15944 . + 0 ID=cds-TMR81575.1;Parent=gene-E3V42_11870;Dbxref=NCBI_GP:TMR81575.1;Name=TMR81575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446595.1;locus_tag=E3V42_11870;product=hypothetical protein;protein_id=TMR81575.1;transl_table=11 SOQV01000110.1 Genbank gene 16060 17520 . + . ID=gene-E3V42_11875;Name=E3V42_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11875 SOQV01000110.1 Protein Homology CDS 16060 17520 . + 0 ID=cds-TMR81576.1;Parent=gene-E3V42_11875;Dbxref=NCBI_GP:TMR81576.1;Name=TMR81576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446594.1;locus_tag=E3V42_11875;product=nicotinate phosphoribosyltransferase;protein_id=TMR81576.1;transl_table=11 SOQV01000110.1 Genbank gene 17517 18341 . + . ID=gene-E3V42_11880;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=E3V42_11880 SOQV01000110.1 Protein Homology CDS 17517 18341 . + 0 ID=cds-TMR81577.1;Parent=gene-E3V42_11880;Dbxref=NCBI_GP:TMR81577.1;Name=TMR81577.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446593.1;locus_tag=E3V42_11880;product=ammonia-dependent NAD(+) synthetase;protein_id=TMR81577.1;transl_table=11 SOQV01000110.1 Genbank gene 18691 19242 . + . ID=gene-E3V42_11885;Name=E3V42_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11885 SOQV01000110.1 Protein Homology CDS 18691 19242 . + 0 ID=cds-TMR81578.1;Parent=gene-E3V42_11885;Dbxref=NCBI_GP:TMR81578.1;Name=TMR81578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358868.1;locus_tag=E3V42_11885;product=N-acetyltransferase;protein_id=TMR81578.1;transl_table=11 SOQV01000110.1 Genbank gene 19872 20441 . + . ID=gene-E3V42_11890;Name=E3V42_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11890 SOQV01000110.1 Protein Homology CDS 19872 20441 . + 0 ID=cds-TMR81579.1;Parent=gene-E3V42_11890;Dbxref=NCBI_GP:TMR81579.1;Name=TMR81579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017291.1;locus_tag=E3V42_11890;product=hypothetical protein;protein_id=TMR81579.1;transl_table=11 SOQV01000110.1 Genbank gene 20438 24271 . + . ID=gene-E3V42_11895;Name=E3V42_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11895 SOQV01000110.1 Protein Homology CDS 20438 24271 . + 0 ID=cds-TMR81580.1;Parent=gene-E3V42_11895;Dbxref=NCBI_GP:TMR81580.1;Name=TMR81580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458172.1;locus_tag=E3V42_11895;product=hypothetical protein;protein_id=TMR81580.1;transl_table=11 ##sequence-region SOQV01000111.1 1 590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000111.1 Genbank region 1 590 . + . ID=SOQV01000111.1:1..590;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000111.1 Genbank gene 6 590 . + . ID=gene-E3V42_11900;Name=E3V42_11900;end_range=590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11900;partial=true SOQV01000111.1 Protein Homology CDS 6 590 . + 0 ID=cds-TMR81551.1;Parent=gene-E3V42_11900;Dbxref=NCBI_GP:TMR81551.1;Name=TMR81551.1;end_range=590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_035184117.1;locus_tag=E3V42_11900;partial=true;product=ribonucleoside-triphosphate reductase%2C adenosylcobalamin-dependent;protein_id=TMR81551.1;transl_table=11 ##sequence-region SOQV01000112.1 1 2814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000112.1 Genbank region 1 2814 . + . ID=SOQV01000112.1:1..2814;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000112.1 Genbank gene 1 572 . + . ID=gene-E3V42_11905;Name=E3V42_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11905;partial=true;start_range=.,1 SOQV01000112.1 Protein Homology CDS 1 572 . + 2 ID=cds-TMR81548.1;Parent=gene-E3V42_11905;Dbxref=NCBI_GP:TMR81548.1;Name=TMR81548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_11905;partial=true;product=IS630 family transposase;protein_id=TMR81548.1;start_range=.,1;transl_table=11 SOQV01000112.1 Genbank gene 689 2668 . + . ID=gene-E3V42_11910;Name=E3V42_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11910 SOQV01000112.1 Protein Homology CDS 689 2668 . + 0 ID=cds-TMR81549.1;Parent=gene-E3V42_11910;Dbxref=NCBI_GP:TMR81549.1;Name=TMR81549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357921.1;locus_tag=E3V42_11910;product=peptide ABC transporter substrate-binding protein;protein_id=TMR81549.1;transl_table=11 SOQV01000112.1 Genbank gene 2725 2814 . + . ID=gene-E3V42_11915;Name=E3V42_11915;end_range=2814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11915;partial=true SOQV01000112.1 Protein Homology CDS 2725 2814 . + 0 ID=cds-TMR81550.1;Parent=gene-E3V42_11915;Dbxref=NCBI_GP:TMR81550.1;Name=TMR81550.1;end_range=2814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950561.1;locus_tag=E3V42_11915;partial=true;product=transposase;protein_id=TMR81550.1;transl_table=11 ##sequence-region SOQV01000113.1 1 24124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000113.1 Genbank region 1 24124 . + . ID=SOQV01000113.1:1..24124;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000113.1 Genbank pseudogene 173 253 . + . ID=gene-E3V42_11920;Name=E3V42_11920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_11920;pseudo=true SOQV01000113.1 Protein Homology CDS 173 253 . + 0 ID=cds-E3V42_11920;Parent=gene-E3V42_11920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237583.1;locus_tag=E3V42_11920;product=N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000113.1 Genbank gene 336 1736 . + . ID=gene-E3V42_11925;Name=E3V42_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11925 SOQV01000113.1 Protein Homology CDS 336 1736 . + 0 ID=cds-TMR81456.1;Parent=gene-E3V42_11925;Dbxref=NCBI_GP:TMR81456.1;Name=TMR81456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446622.1;locus_tag=E3V42_11925;product=bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase;protein_id=TMR81456.1;transl_table=11 SOQV01000113.1 Genbank gene 1738 2097 . + . ID=gene-E3V42_11930;Name=E3V42_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11930 SOQV01000113.1 Protein Homology CDS 1738 2097 . + 0 ID=cds-TMR81457.1;Parent=gene-E3V42_11930;Dbxref=NCBI_GP:TMR81457.1;Name=TMR81457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446621.1;locus_tag=E3V42_11930;product=S1 RNA-binding domain-containing protein;protein_id=TMR81457.1;transl_table=11 SOQV01000113.1 Genbank gene 2151 2900 . + . ID=gene-E3V42_11935;Name=E3V42_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11935 SOQV01000113.1 Protein Homology CDS 2151 2900 . + 0 ID=cds-TMR81458.1;Parent=gene-E3V42_11935;Dbxref=NCBI_GP:TMR81458.1;Name=TMR81458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390770.1;locus_tag=E3V42_11935;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=TMR81458.1;transl_table=11 SOQV01000113.1 Genbank gene 2890 3174 . + . ID=gene-E3V42_11940;Name=E3V42_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11940 SOQV01000113.1 Protein Homology CDS 2890 3174 . + 0 ID=cds-TMR81459.1;Parent=gene-E3V42_11940;Dbxref=NCBI_GP:TMR81459.1;Name=TMR81459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358983.1;locus_tag=E3V42_11940;product=GIY-YIG nuclease family protein;protein_id=TMR81459.1;transl_table=11 SOQV01000113.1 Genbank gene 3260 4195 . + . ID=gene-E3V42_11945;Name=E3V42_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11945 SOQV01000113.1 Protein Homology CDS 3260 4195 . + 0 ID=cds-TMR81460.1;Parent=gene-E3V42_11945;Dbxref=NCBI_GP:TMR81460.1;Name=TMR81460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=E3V42_11945;product=manganese-dependent inorganic pyrophosphatase;protein_id=TMR81460.1;transl_table=11 SOQV01000113.1 Genbank gene 4282 4794 . + . ID=gene-E3V42_11950;Name=E3V42_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11950 SOQV01000113.1 Protein Homology CDS 4282 4794 . + 0 ID=cds-TMR81461.1;Parent=gene-E3V42_11950;Dbxref=NCBI_GP:TMR81461.1;Name=TMR81461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358981.1;locus_tag=E3V42_11950;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TMR81461.1;transl_table=11 SOQV01000113.1 Genbank gene 4778 5428 . + . ID=gene-E3V42_11955;Name=E3V42_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11955 SOQV01000113.1 Protein Homology CDS 4778 5428 . + 0 ID=cds-TMR81462.1;Parent=gene-E3V42_11955;Dbxref=NCBI_GP:TMR81462.1;Name=TMR81462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446616.1;locus_tag=E3V42_11955;product=DUF1803 domain-containing protein;protein_id=TMR81462.1;transl_table=11 SOQV01000113.1 Genbank gene 5528 5725 . + . ID=gene-E3V42_11960;Name=E3V42_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11960 SOQV01000113.1 Protein Homology CDS 5528 5725 . + 0 ID=cds-TMR81463.1;Parent=gene-E3V42_11960;Dbxref=NCBI_GP:TMR81463.1;Name=TMR81463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051196.1;locus_tag=E3V42_11960;product=CsbD family protein;protein_id=TMR81463.1;transl_table=11 SOQV01000113.1 Genbank gene 5771 7216 . - . ID=gene-E3V42_11965;Name=E3V42_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11965 SOQV01000113.1 Protein Homology CDS 5771 7216 . - 0 ID=cds-TMR81464.1;Parent=gene-E3V42_11965;Dbxref=NCBI_GP:TMR81464.1;Name=TMR81464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358977.1;locus_tag=E3V42_11965;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=TMR81464.1;transl_table=11 SOQV01000113.1 Genbank gene 7322 8944 . + . ID=gene-E3V42_11970;Name=E3V42_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11970 SOQV01000113.1 Protein Homology CDS 7322 8944 . + 0 ID=cds-TMR81465.1;Parent=gene-E3V42_11970;Dbxref=NCBI_GP:TMR81465.1;Name=TMR81465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358976.1;locus_tag=E3V42_11970;product=polysaccharide biosynthesis protein;protein_id=TMR81465.1;transl_table=11 SOQV01000113.1 Genbank gene 9150 11108 . + . ID=gene-E3V42_11975;Name=E3V42_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11975 SOQV01000113.1 Protein Homology CDS 9150 11108 . + 0 ID=cds-TMR81466.1;Parent=gene-E3V42_11975;Dbxref=NCBI_GP:TMR81466.1;Name=TMR81466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358975.1;locus_tag=E3V42_11975;product=peptide ABC transporter substrate-binding protein;protein_id=TMR81466.1;transl_table=11 SOQV01000113.1 Genbank gene 11280 12962 . + . ID=gene-E3V42_11980;Name=E3V42_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11980 SOQV01000113.1 Protein Homology CDS 11280 12962 . + 0 ID=cds-TMR81467.1;Parent=gene-E3V42_11980;Dbxref=NCBI_GP:TMR81467.1;Name=TMR81467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768988.1;locus_tag=E3V42_11980;product=ABC transporter ATP-binding protein;protein_id=TMR81467.1;transl_table=11 SOQV01000113.1 Genbank gene 13120 14214 . + . ID=gene-E3V42_11985;Name=E3V42_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11985 SOQV01000113.1 Protein Homology CDS 13120 14214 . + 0 ID=cds-TMR81468.1;Parent=gene-E3V42_11985;Dbxref=NCBI_GP:TMR81468.1;Name=TMR81468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358970.1;locus_tag=E3V42_11985;product=cystathionine gamma-synthase;protein_id=TMR81468.1;transl_table=11 SOQV01000113.1 Genbank gene 14222 15388 . + . ID=gene-E3V42_11990;Name=E3V42_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11990 SOQV01000113.1 Protein Homology CDS 14222 15388 . + 0 ID=cds-TMR81469.1;Parent=gene-E3V42_11990;Dbxref=NCBI_GP:TMR81469.1;Name=TMR81469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521357.1;locus_tag=E3V42_11990;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR81469.1;transl_table=11 SOQV01000113.1 Genbank gene 15481 18579 . + . ID=gene-E3V42_11995;Name=E3V42_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_11995 SOQV01000113.1 Protein Homology CDS 15481 18579 . + 0 ID=cds-TMR81470.1;Parent=gene-E3V42_11995;Dbxref=NCBI_GP:TMR81470.1;Name=TMR81470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358968.1;locus_tag=E3V42_11995;product=DEAD/DEAH box helicase;protein_id=TMR81470.1;transl_table=11 SOQV01000113.1 Genbank gene 18627 19244 . + . ID=gene-E3V42_12000;Name=E3V42_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_12000 SOQV01000113.1 Protein Homology CDS 18627 19244 . + 0 ID=cds-TMR81471.1;Parent=gene-E3V42_12000;Dbxref=NCBI_GP:TMR81471.1;Name=TMR81471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358967.1;locus_tag=E3V42_12000;product=cystathionine gamma-synthase;protein_id=TMR81471.1;transl_table=11 SOQV01000113.1 Genbank gene 19255 20589 . + . ID=gene-E3V42_12005;Name=E3V42_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_12005 SOQV01000113.1 Protein Homology CDS 19255 20589 . + 0 ID=cds-TMR81472.1;Parent=gene-E3V42_12005;Dbxref=NCBI_GP:TMR81472.1;Name=TMR81472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358966.1;locus_tag=E3V42_12005;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=TMR81472.1;transl_table=11 SOQV01000113.1 Genbank gene 20599 21060 . + . ID=gene-E3V42_12010;Name=E3V42_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_12010 SOQV01000113.1 Protein Homology CDS 20599 21060 . + 0 ID=cds-TMR81473.1;Parent=gene-E3V42_12010;Dbxref=NCBI_GP:TMR81473.1;Name=TMR81473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358965.1;locus_tag=E3V42_12010;product=GNAT family N-acetyltransferase;protein_id=TMR81473.1;transl_table=11 SOQV01000113.1 Genbank gene 21057 21551 . + . ID=gene-E3V42_12015;Name=E3V42_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_12015 SOQV01000113.1 Protein Homology CDS 21057 21551 . + 0 ID=cds-TMR81474.1;Parent=gene-E3V42_12015;Dbxref=NCBI_GP:TMR81474.1;Name=TMR81474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358964.1;locus_tag=E3V42_12015;product=GNAT family N-acetyltransferase;protein_id=TMR81474.1;transl_table=11 SOQV01000113.1 Genbank gene 21632 23296 . + . ID=gene-E3V42_12020;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=E3V42_12020 SOQV01000113.1 Protein Homology CDS 21632 23296 . + 0 ID=cds-TMR81475.1;Parent=gene-E3V42_12020;Dbxref=NCBI_GP:TMR81475.1;Name=TMR81475.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291668.1;locus_tag=E3V42_12020;product=endolytic transglycosylase MltG;protein_id=TMR81475.1;transl_table=11 SOQV01000113.1 Genbank gene 23358 23840 . + . ID=gene-E3V42_12025;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=E3V42_12025 SOQV01000113.1 Protein Homology CDS 23358 23840 . + 0 ID=cds-TMR81476.1;Parent=gene-E3V42_12025;Dbxref=NCBI_GP:TMR81476.1;Name=TMR81476.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370745.1;locus_tag=E3V42_12025;product=transcription elongation factor GreA;protein_id=TMR81476.1;transl_table=11 SOQV01000113.1 Genbank gene 24002 24124 . - . ID=gene-E3V42_12030;Name=E3V42_12030;end_range=24124,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_12030;partial=true SOQV01000113.1 Protein Homology CDS 24002 24124 . - 0 ID=cds-TMR81477.1;Parent=gene-E3V42_12030;Dbxref=NCBI_GP:TMR81477.1;Name=TMR81477.1;end_range=24124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_12030;partial=true;product=IS630 family transposase;protein_id=TMR81477.1;transl_table=11 ##sequence-region SOQV01000012.1 1 1045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000012.1 Genbank region 1 1045 . + . ID=SOQV01000012.1:1..1045;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 ##sequence-region SOQV01000013.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000013.1 Genbank region 1 1059 . + . ID=SOQV01000013.1:1..1059;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000013.1 Genbank gene 5 1052 . - . ID=gene-E3V42_01165;Name=E3V42_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01165 SOQV01000013.1 Protein Homology CDS 556 1052 . - 0 ID=cds-TMR85349.1;Parent=gene-E3V42_01165;Dbxref=NCBI_GP:TMR85349.1;Name=TMR85349.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_01165;product=IS630 family transposase;protein_id=TMR85349.1;transl_table=11 SOQV01000013.1 Protein Homology CDS 5 557 . - 1 ID=cds-TMR85349.1;Parent=gene-E3V42_01165;Dbxref=NCBI_GP:TMR85349.1;Name=TMR85349.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_01165;product=IS630 family transposase;protein_id=TMR85349.1;transl_table=11 ##sequence-region SOQV01000014.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000014.1 Genbank region 1 720 . + . ID=SOQV01000014.1:1..720;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000014.1 Genbank gene 349 420 . + . ID=gene-E3V42_01170;Name=E3V42_01170;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_01170 SOQV01000014.1 tRNAscan-SE tRNA 349 420 . + . ID=rna-E3V42_01170;Parent=gene-E3V42_01170;anticodon=(pos:382..384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_01170;product=tRNA-Glu SOQV01000014.1 tRNAscan-SE exon 349 420 . + . ID=exon-E3V42_01170-1;Parent=rna-E3V42_01170;anticodon=(pos:382..384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_01170;product=tRNA-Glu ##sequence-region SOQV01000015.1 1 615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000015.1 Genbank region 1 615 . + . ID=SOQV01000015.1:1..615;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000015.1 Genbank pseudogene 1 615 . - . ID=gene-E3V42_01175;Name=E3V42_01175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01175;pseudo=true SOQV01000015.1 Protein Homology CDS 1 615 . - 2 ID=cds-E3V42_01175;Parent=gene-E3V42_01175;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V42_01175;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000016.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000016.1 Genbank region 1 1025 . + . ID=SOQV01000016.1:1..1025;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000016.1 Genbank pseudogene 1 290 . + . ID=gene-E3V42_01180;Name=E3V42_01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01180;pseudo=true SOQV01000016.1 Protein Homology CDS 1 290 . + 2 ID=cds-E3V42_01180;Parent=gene-E3V42_01180;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=E3V42_01180;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000016.1 Genbank gene 463 789 . + . ID=gene-E3V42_01185;Name=E3V42_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01185 SOQV01000016.1 Protein Homology CDS 463 789 . + 0 ID=cds-TMR85325.1;Parent=gene-E3V42_01185;Dbxref=NCBI_GP:TMR85325.1;Name=TMR85325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=E3V42_01185;product=transposase;protein_id=TMR85325.1;transl_table=11 SOQV01000016.1 Genbank gene 776 1025 . + . ID=gene-E3V42_01190;Name=E3V42_01190;end_range=1025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01190;partial=true SOQV01000016.1 GeneMarkS-2+ CDS 776 1025 . + 0 ID=cds-TMR85326.1;Parent=gene-E3V42_01190;Dbxref=NCBI_GP:TMR85326.1;Name=TMR85326.1;end_range=1025,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_01190;partial=true;product=IS630 family transposase;protein_id=TMR85326.1;transl_table=11 ##sequence-region SOQV01000017.1 1 648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000017.1 Genbank region 1 648 . + . ID=SOQV01000017.1:1..648;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000017.1 Genbank gene 1 220 . + . ID=gene-E3V42_01195;Name=E3V42_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01195;partial=true;start_range=.,1 SOQV01000017.1 Protein Homology CDS 1 220 . + 1 ID=cds-TMR85324.1;Parent=gene-E3V42_01195;Dbxref=NCBI_GP:TMR85324.1;Name=TMR85324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142808.1;locus_tag=E3V42_01195;partial=true;product=IS1634 family transposase;protein_id=TMR85324.1;start_range=.,1;transl_table=11 SOQV01000017.1 Genbank pseudogene 343 423 . - . ID=gene-E3V42_01200;Name=E3V42_01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01200;pseudo=true SOQV01000017.1 Protein Homology CDS 343 423 . - 0 ID=cds-E3V42_01200;Parent=gene-E3V42_01200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237583.1;locus_tag=E3V42_01200;product=N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region SOQV01000018.1 1 23863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000018.1 Genbank region 1 23863 . + . ID=SOQV01000018.1:1..23863;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000018.1 Genbank gene 1 120 . - . ID=gene-E3V42_01205;Name=E3V42_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01205;partial=true;start_range=.,1 SOQV01000018.1 Protein Homology CDS 1 120 . - 0 ID=cds-TMR85295.1;Parent=gene-E3V42_01205;Dbxref=NCBI_GP:TMR85295.1;Name=TMR85295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_01205;partial=true;product=IS630 family transposase;protein_id=TMR85295.1;start_range=.,1;transl_table=11 SOQV01000018.1 Genbank gene 292 759 . + . ID=gene-E3V42_01210;Name=E3V42_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01210 SOQV01000018.1 Protein Homology CDS 292 759 . + 0 ID=cds-TMR85296.1;Parent=gene-E3V42_01210;Dbxref=NCBI_GP:TMR85296.1;Name=TMR85296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358961.1;locus_tag=E3V42_01210;product=GNAT family N-acetyltransferase;protein_id=TMR85296.1;transl_table=11 SOQV01000018.1 Genbank gene 1189 1389 . + . ID=gene-E3V42_01215;Name=E3V42_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01215 SOQV01000018.1 Protein Homology CDS 1189 1389 . + 0 ID=cds-TMR85297.1;Parent=gene-E3V42_01215;Dbxref=NCBI_GP:TMR85297.1;Name=TMR85297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358959.1;locus_tag=E3V42_01215;product=F0F1 ATP synthase subunit C;protein_id=TMR85297.1;transl_table=11 SOQV01000018.1 Genbank gene 1424 2140 . + . ID=gene-E3V42_01220;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=E3V42_01220 SOQV01000018.1 Protein Homology CDS 1424 2140 . + 0 ID=cds-TMR85298.1;Parent=gene-E3V42_01220;Dbxref=NCBI_GP:TMR85298.1;Name=TMR85298.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358958.1;locus_tag=E3V42_01220;product=F0F1 ATP synthase subunit A;protein_id=TMR85298.1;transl_table=11 SOQV01000018.1 Genbank gene 2154 2648 . + . ID=gene-E3V42_01225;Name=E3V42_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01225 SOQV01000018.1 Protein Homology CDS 2154 2648 . + 0 ID=cds-TMR85299.1;Parent=gene-E3V42_01225;Dbxref=NCBI_GP:TMR85299.1;Name=TMR85299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446421.1;locus_tag=E3V42_01225;product=ATP synthase F0 subunit B;protein_id=TMR85299.1;transl_table=11 SOQV01000018.1 Genbank gene 2648 3184 . + . ID=gene-E3V42_01230;Name=E3V42_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01230 SOQV01000018.1 Protein Homology CDS 2648 3184 . + 0 ID=cds-TMR85300.1;Parent=gene-E3V42_01230;Dbxref=NCBI_GP:TMR85300.1;Name=TMR85300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358956.1;locus_tag=E3V42_01230;product=F0F1 ATP synthase subunit delta;protein_id=TMR85300.1;transl_table=11 SOQV01000018.1 Genbank gene 3199 4704 . + . ID=gene-E3V42_01235;Name=E3V42_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01235 SOQV01000018.1 Protein Homology CDS 3199 4704 . + 0 ID=cds-TMR85301.1;Parent=gene-E3V42_01235;Dbxref=NCBI_GP:TMR85301.1;Name=TMR85301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446419.1;locus_tag=E3V42_01235;product=F0F1 ATP synthase subunit alpha;protein_id=TMR85301.1;transl_table=11 SOQV01000018.1 Genbank gene 4720 5598 . + . ID=gene-E3V42_01240;Name=E3V42_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01240 SOQV01000018.1 Protein Homology CDS 4720 5598 . + 0 ID=cds-TMR85302.1;Parent=gene-E3V42_01240;Dbxref=NCBI_GP:TMR85302.1;Name=TMR85302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446418.1;locus_tag=E3V42_01240;product=F0F1 ATP synthase subunit gamma;protein_id=TMR85302.1;transl_table=11 SOQV01000018.1 Genbank gene 5789 7195 . + . ID=gene-E3V42_01245;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=E3V42_01245 SOQV01000018.1 Protein Homology CDS 5789 7195 . + 0 ID=cds-TMR85303.1;Parent=gene-E3V42_01245;Dbxref=NCBI_GP:TMR85303.1;Name=TMR85303.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=E3V42_01245;product=F0F1 ATP synthase subunit beta;protein_id=TMR85303.1;transl_table=11 SOQV01000018.1 Genbank gene 7206 7625 . + . ID=gene-E3V42_01250;Name=E3V42_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01250 SOQV01000018.1 Protein Homology CDS 7206 7625 . + 0 ID=cds-TMR85304.1;Parent=gene-E3V42_01250;Dbxref=NCBI_GP:TMR85304.1;Name=TMR85304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358952.1;locus_tag=E3V42_01250;product=F0F1 ATP synthase subunit epsilon;protein_id=TMR85304.1;transl_table=11 SOQV01000018.1 Genbank gene 7869 8882 . - . ID=gene-E3V42_01255;Name=E3V42_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01255 SOQV01000018.1 Protein Homology CDS 7869 8882 . - 0 ID=cds-TMR85305.1;Parent=gene-E3V42_01255;Dbxref=NCBI_GP:TMR85305.1;Name=TMR85305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358951.1;locus_tag=E3V42_01255;product=6-phosphogluconolactonase;protein_id=TMR85305.1;transl_table=11 SOQV01000018.1 Genbank gene 9026 10192 . + . ID=gene-E3V42_01260;Name=E3V42_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01260 SOQV01000018.1 Protein Homology CDS 9026 10192 . + 0 ID=cds-TMR85306.1;Parent=gene-E3V42_01260;Dbxref=NCBI_GP:TMR85306.1;Name=TMR85306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358950.1;locus_tag=E3V42_01260;product=AI-2E family transporter;protein_id=TMR85306.1;transl_table=11 SOQV01000018.1 Genbank gene 10200 11411 . + . ID=gene-E3V42_01265;Name=E3V42_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01265 SOQV01000018.1 Protein Homology CDS 10200 11411 . + 0 ID=cds-TMR85315.1;Parent=gene-E3V42_01265;Dbxref=NCBI_GP:TMR85315.1;Name=TMR85315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446408.1;locus_tag=E3V42_01265;product=tetratricopeptide repeat protein;protein_id=TMR85315.1;transl_table=11 SOQV01000018.1 Genbank gene 11557 12198 . + . ID=gene-E3V42_01270;Name=E3V42_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01270 SOQV01000018.1 Protein Homology CDS 11557 12198 . + 0 ID=cds-TMR85307.1;Parent=gene-E3V42_01270;Dbxref=NCBI_GP:TMR85307.1;Name=TMR85307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446407.1;locus_tag=E3V42_01270;product=amino acid ABC transporter permease;protein_id=TMR85307.1;transl_table=11 SOQV01000018.1 Genbank gene 12208 12837 . + . ID=gene-E3V42_01275;Name=E3V42_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01275 SOQV01000018.1 Protein Homology CDS 12208 12837 . + 0 ID=cds-TMR85308.1;Parent=gene-E3V42_01275;Dbxref=NCBI_GP:TMR85308.1;Name=TMR85308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358947.1;locus_tag=E3V42_01275;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR85308.1;transl_table=11 SOQV01000018.1 Genbank gene 12850 13686 . + . ID=gene-E3V42_01280;Name=E3V42_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01280 SOQV01000018.1 Protein Homology CDS 12850 13686 . + 0 ID=cds-TMR85309.1;Parent=gene-E3V42_01280;Dbxref=NCBI_GP:TMR85309.1;Name=TMR85309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358946.1;locus_tag=E3V42_01280;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR85309.1;transl_table=11 SOQV01000018.1 Genbank gene 13602 13838 . - . ID=gene-E3V42_01285;Name=E3V42_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01285 SOQV01000018.1 Protein Homology CDS 13602 13838 . - 0 ID=cds-TMR85310.1;Parent=gene-E3V42_01285;Dbxref=NCBI_GP:TMR85310.1;Name=TMR85310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844800.1;locus_tag=E3V42_01285;product=hypothetical protein;protein_id=TMR85310.1;transl_table=11 SOQV01000018.1 Genbank gene 13965 14312 . - . ID=gene-E3V42_01290;Name=E3V42_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01290 SOQV01000018.1 Protein Homology CDS 13965 14312 . - 0 ID=cds-TMR85311.1;Parent=gene-E3V42_01290;Dbxref=NCBI_GP:TMR85311.1;Name=TMR85311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446285.1;locus_tag=E3V42_01290;product=thiol reductase thioredoxin;protein_id=TMR85311.1;transl_table=11 SOQV01000018.1 Genbank gene 14424 16142 . - . ID=gene-E3V42_01295;Name=E3V42_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01295 SOQV01000018.1 Protein Homology CDS 14424 16142 . - 0 ID=cds-TMR85312.1;Parent=gene-E3V42_01295;Dbxref=NCBI_GP:TMR85312.1;Name=TMR85312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446284.1;locus_tag=E3V42_01295;product=phospho-sugar mutase;protein_id=TMR85312.1;transl_table=11 SOQV01000018.1 Genbank pseudogene 16423 16551 . + . ID=gene-E3V42_01300;Name=E3V42_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01300;pseudo=true SOQV01000018.1 Protein Homology CDS 16423 16551 . + 0 ID=cds-E3V42_01300;Parent=gene-E3V42_01300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=E3V42_01300;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQV01000018.1 Genbank pseudogene 18847 19468 . + . ID=gene-E3V42_01305;Name=E3V42_01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01305;pseudo=true SOQV01000018.1 Protein Homology CDS 18847 19468 . + 0 ID=cds-E3V42_01305;Parent=gene-E3V42_01305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818859.1;locus_tag=E3V42_01305;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000018.1 Genbank pseudogene 19426 19734 . + . ID=gene-E3V42_01310;Name=E3V42_01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01310;pseudo=true SOQV01000018.1 Protein Homology CDS 19426 19734 . + 0 ID=cds-E3V42_01310;Parent=gene-E3V42_01310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248972.1;locus_tag=E3V42_01310;product=cell surface protein;pseudo=true;transl_table=11 SOQV01000018.1 Genbank gene 20929 21579 . + . ID=gene-E3V42_01315;Name=E3V42_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01315 SOQV01000018.1 Protein Homology CDS 20929 21579 . + 0 ID=cds-TMR85316.1;Parent=gene-E3V42_01315;Dbxref=NCBI_GP:TMR85316.1;Name=TMR85316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248972.1;locus_tag=E3V42_01315;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR85316.1;transl_table=11 SOQV01000018.1 Genbank gene 21802 22671 . + . ID=gene-E3V42_01320;Name=E3V42_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01320 SOQV01000018.1 Protein Homology CDS 21802 22671 . + 0 ID=cds-TMR85313.1;Parent=gene-E3V42_01320;Dbxref=NCBI_GP:TMR85313.1;Name=TMR85313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358937.1;locus_tag=E3V42_01320;product=aquaporin family protein;protein_id=TMR85313.1;transl_table=11 SOQV01000018.1 Genbank gene 22833 23024 . - . ID=gene-E3V42_01325;Name=E3V42_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01325 SOQV01000018.1 Protein Homology CDS 22833 23024 . - 0 ID=cds-TMR85314.1;Parent=gene-E3V42_01325;Dbxref=NCBI_GP:TMR85314.1;Name=TMR85314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461753.1;locus_tag=E3V42_01325;product=hypothetical protein;protein_id=TMR85314.1;transl_table=11 SOQV01000018.1 Genbank pseudogene 23289 23729 . - . ID=gene-E3V42_01330;Name=E3V42_01330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01330;pseudo=true SOQV01000018.1 Protein Homology CDS 23289 23729 . - 0 ID=cds-E3V42_01330;Parent=gene-E3V42_01330;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V42_01330;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000019.1 1 1061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000019.1 Genbank region 1 1061 . + . ID=SOQV01000019.1:1..1061;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000019.1 Genbank gene 1 256 . - . ID=gene-E3V42_01335;Name=E3V42_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01335;partial=true;start_range=.,1 SOQV01000019.1 Protein Homology CDS 1 256 . - 0 ID=cds-TMR85292.1;Parent=gene-E3V42_01335;Dbxref=NCBI_GP:TMR85292.1;Name=TMR85292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538659.1;locus_tag=E3V42_01335;partial=true;product=hypothetical protein;protein_id=TMR85292.1;start_range=.,1;transl_table=11 SOQV01000019.1 Genbank gene 288 479 . + . ID=gene-E3V42_01340;Name=E3V42_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01340 SOQV01000019.1 Protein Homology CDS 288 479 . + 0 ID=cds-TMR85293.1;Parent=gene-E3V42_01340;Dbxref=NCBI_GP:TMR85293.1;Name=TMR85293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165985.1;locus_tag=E3V42_01340;product=Rop family plasmid primer RNA-binding protein;protein_id=TMR85293.1;transl_table=11 ##sequence-region SOQV01000002.1 1 2217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000002.1 Genbank region 1 2217 . + . ID=SOQV01000002.1:1..2217;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000002.1 Genbank pseudogene 1 142 . + . ID=gene-E3V42_00265;Name=E3V42_00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00265;pseudo=true SOQV01000002.1 Protein Homology CDS 1 142 . + 0 ID=cds-E3V42_00265;Parent=gene-E3V42_00265;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837346.1;locus_tag=E3V42_00265;product=type I restriction endonuclease subunit S;pseudo=true;transl_table=11 SOQV01000002.1 Genbank gene 139 639 . + . ID=gene-E3V42_00270;Name=E3V42_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00270 SOQV01000002.1 Protein Homology CDS 139 639 . + 0 ID=cds-TMR85613.1;Parent=gene-E3V42_00270;Dbxref=NCBI_GP:TMR85613.1;Name=TMR85613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284928.1;locus_tag=E3V42_00270;product=restriction endonuclease subunit S;protein_id=TMR85613.1;transl_table=11 SOQV01000002.1 Genbank gene 599 1042 . - . ID=gene-E3V42_00275;Name=E3V42_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00275 SOQV01000002.1 Protein Homology CDS 599 1042 . - 0 ID=cds-TMR85616.1;Parent=gene-E3V42_00275;Dbxref=NCBI_GP:TMR85616.1;Name=TMR85616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284929.1;locus_tag=E3V42_00275;product=restriction endonuclease subunit S;protein_id=TMR85616.1;transl_table=11 SOQV01000002.1 Genbank gene 1152 1949 . - . ID=gene-E3V42_00280;Name=E3V42_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00280 SOQV01000002.1 Protein Homology CDS 1152 1949 . - 0 ID=cds-TMR85614.1;Parent=gene-E3V42_00280;Dbxref=NCBI_GP:TMR85614.1;Name=TMR85614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651176.1;locus_tag=E3V42_00280;product=integrase;protein_id=TMR85614.1;transl_table=11 SOQV01000002.1 Genbank gene 2006 2217 . - . ID=gene-E3V42_00285;Name=E3V42_00285;end_range=2217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00285;partial=true SOQV01000002.1 Protein Homology CDS 2006 2217 . - 2 ID=cds-TMR85615.1;Parent=gene-E3V42_00285;Dbxref=NCBI_GP:TMR85615.1;Name=TMR85615.1;end_range=2217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017333.1;locus_tag=E3V42_00285;partial=true;product=type I restriction endonuclease subunit S;protein_id=TMR85615.1;transl_table=11 ##sequence-region SOQV01000020.1 1 3229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000020.1 Genbank region 1 3229 . + . ID=SOQV01000020.1:1..3229;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000020.1 Genbank gene 1 931 . + . ID=gene-E3V42_01345;Name=E3V42_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01345;partial=true;start_range=.,1 SOQV01000020.1 Protein Homology CDS 1 931 . + 1 ID=cds-TMR85269.1;Parent=gene-E3V42_01345;Dbxref=NCBI_GP:TMR85269.1;Name=TMR85269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_01345;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR85269.1;start_range=.,1;transl_table=11 SOQV01000020.1 Genbank pseudogene 1090 2382 . - . ID=gene-E3V42_01350;Name=E3V42_01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01350;pseudo=true SOQV01000020.1 Protein Homology CDS 1090 2382 . - 0 ID=cds-E3V42_01350;Parent=gene-E3V42_01350;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002948696.1;locus_tag=E3V42_01350;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQV01000020.1 Genbank pseudogene 2460 2624 . - . ID=gene-E3V42_01355;Name=E3V42_01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01355;pseudo=true SOQV01000020.1 Protein Homology CDS 2460 2624 . - 0 ID=cds-E3V42_01355;Parent=gene-E3V42_01355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822315.1;locus_tag=E3V42_01355;product=transposase;pseudo=true;transl_table=11 SOQV01000020.1 Genbank gene 2631 2990 . + . ID=gene-E3V42_01360;Name=E3V42_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01360 SOQV01000020.1 Protein Homology CDS 2631 2990 . + 0 ID=cds-TMR85271.1;Parent=gene-E3V42_01360;Dbxref=NCBI_GP:TMR85271.1;Name=TMR85271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_01360;product=transposase;protein_id=TMR85271.1;transl_table=11 SOQV01000020.1 Genbank gene 2977 3229 . + . ID=gene-E3V42_01365;Name=E3V42_01365;end_range=3229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01365;partial=true SOQV01000020.1 GeneMarkS-2+ CDS 2977 3229 . + 0 ID=cds-TMR85270.1;Parent=gene-E3V42_01365;Dbxref=NCBI_GP:TMR85270.1;Name=TMR85270.1;end_range=3229,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_01365;partial=true;product=IS630 family transposase;protein_id=TMR85270.1;transl_table=11 ##sequence-region SOQV01000021.1 1 34425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000021.1 Genbank region 1 34425 . + . ID=SOQV01000021.1:1..34425;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000021.1 Genbank gene 1 856 . - . ID=gene-E3V42_01370;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=E3V42_01370;partial=true;start_range=.,1 SOQV01000021.1 Protein Homology CDS 1 856 . - 0 ID=cds-TMR85235.1;Parent=gene-E3V42_01370;Dbxref=NCBI_GP:TMR85235.1;Name=TMR85235.1;gbkey=CDS;gene=ltrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446251.1;locus_tag=E3V42_01370;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=TMR85235.1;start_range=.,1;transl_table=11 SOQV01000021.1 Genbank gene 1701 3005 . - . ID=gene-E3V42_01375;Name=E3V42_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01375 SOQV01000021.1 Protein Homology CDS 1701 3005 . - 0 ID=cds-TMR85236.1;Parent=gene-E3V42_01375;Dbxref=NCBI_GP:TMR85236.1;Name=TMR85236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022813.1;locus_tag=E3V42_01375;product=phosphopyruvate hydratase;protein_id=TMR85236.1;transl_table=11 SOQV01000021.1 Genbank gene 3169 3615 . + . ID=gene-E3V42_01380;Name=E3V42_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01380 SOQV01000021.1 Protein Homology CDS 3169 3615 . + 0 ID=cds-TMR85237.1;Parent=gene-E3V42_01380;Dbxref=NCBI_GP:TMR85237.1;Name=TMR85237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358629.1;locus_tag=E3V42_01380;product=DUF1694 domain-containing protein;protein_id=TMR85237.1;transl_table=11 SOQV01000021.1 Genbank gene 3612 4739 . - . ID=gene-E3V42_01385;Name=E3V42_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01385 SOQV01000021.1 Protein Homology CDS 3612 4739 . - 0 ID=cds-TMR85238.1;Parent=gene-E3V42_01385;Dbxref=NCBI_GP:TMR85238.1;Name=TMR85238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358628.1;locus_tag=E3V42_01385;product=glycerate kinase;protein_id=TMR85238.1;transl_table=11 SOQV01000021.1 Genbank gene 4736 5380 . - . ID=gene-E3V42_01390;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=E3V42_01390 SOQV01000021.1 Protein Homology CDS 4736 5380 . - 0 ID=cds-TMR85239.1;Parent=gene-E3V42_01390;Dbxref=NCBI_GP:TMR85239.1;Name=TMR85239.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446273.1;locus_tag=E3V42_01390;product=phosphoserine phosphatase SerB;protein_id=TMR85239.1;transl_table=11 SOQV01000021.1 Genbank gene 5439 6872 . - . ID=gene-E3V42_01395;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=E3V42_01395 SOQV01000021.1 Protein Homology CDS 5439 6872 . - 0 ID=cds-TMR85240.1;Parent=gene-E3V42_01395;Dbxref=NCBI_GP:TMR85240.1;Name=TMR85240.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446274.1;locus_tag=E3V42_01395;product=glycogen synthase GlgA;protein_id=TMR85240.1;transl_table=11 SOQV01000021.1 Genbank gene 6869 8008 . - . ID=gene-E3V42_01400;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=E3V42_01400 SOQV01000021.1 Protein Homology CDS 6869 8008 . - 0 ID=cds-TMR85241.1;Parent=gene-E3V42_01400;Dbxref=NCBI_GP:TMR85241.1;Name=TMR85241.1;gbkey=CDS;gene=glgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358625.1;locus_tag=E3V42_01400;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=TMR85241.1;transl_table=11 SOQV01000021.1 Genbank gene 7998 9140 . - . ID=gene-E3V42_01405;Name=E3V42_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01405 SOQV01000021.1 Protein Homology CDS 7998 9140 . - 0 ID=cds-TMR85242.1;Parent=gene-E3V42_01405;Dbxref=NCBI_GP:TMR85242.1;Name=TMR85242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358624.1;locus_tag=E3V42_01405;product=glucose-1-phosphate adenylyltransferase;protein_id=TMR85242.1;transl_table=11 SOQV01000021.1 Genbank gene 9130 11058 . - . ID=gene-E3V42_01410;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=E3V42_01410 SOQV01000021.1 Protein Homology CDS 9130 11058 . - 0 ID=cds-TMR85243.1;Parent=gene-E3V42_01410;Dbxref=NCBI_GP:TMR85243.1;Name=TMR85243.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358623.1;locus_tag=E3V42_01410;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=TMR85243.1;transl_table=11 SOQV01000021.1 Genbank gene 11440 13719 . - . ID=gene-E3V42_01415;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=E3V42_01415 SOQV01000021.1 Protein Homology CDS 11440 13719 . - 0 ID=cds-TMR85244.1;Parent=gene-E3V42_01415;Dbxref=NCBI_GP:TMR85244.1;Name=TMR85244.1;gbkey=CDS;gene=pulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358619.1;locus_tag=E3V42_01415;product=type I pullulanase;protein_id=TMR85244.1;transl_table=11 SOQV01000021.1 Genbank gene 13742 14701 . - . ID=gene-E3V42_01420;Name=E3V42_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01420 SOQV01000021.1 Protein Homology CDS 13742 14701 . - 0 ID=cds-TMR85245.1;Parent=gene-E3V42_01420;Dbxref=NCBI_GP:TMR85245.1;Name=TMR85245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134183.1;locus_tag=E3V42_01420;product=YegS/Rv2252/BmrU family lipid kinase;protein_id=TMR85245.1;transl_table=11 SOQV01000021.1 Genbank gene 14704 16662 . - . ID=gene-E3V42_01425;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=E3V42_01425 SOQV01000021.1 Protein Homology CDS 14704 16662 . - 0 ID=cds-TMR85246.1;Parent=gene-E3V42_01425;Dbxref=NCBI_GP:TMR85246.1;Name=TMR85246.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446280.1;locus_tag=E3V42_01425;product=NAD-dependent DNA ligase LigA;protein_id=TMR85246.1;transl_table=11 SOQV01000021.1 Genbank gene 16755 17933 . - . ID=gene-E3V42_01430;Name=E3V42_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01430 SOQV01000021.1 Protein Homology CDS 16755 17933 . - 0 ID=cds-TMR85247.1;Parent=gene-E3V42_01430;Dbxref=NCBI_GP:TMR85247.1;Name=TMR85247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358617.1;locus_tag=E3V42_01430;product=MFS transporter;protein_id=TMR85247.1;transl_table=11 SOQV01000021.1 Genbank gene 18013 18876 . - . ID=gene-E3V42_01435;Name=E3V42_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01435 SOQV01000021.1 Protein Homology CDS 18013 18876 . - 0 ID=cds-TMR85248.1;Parent=gene-E3V42_01435;Dbxref=NCBI_GP:TMR85248.1;Name=TMR85248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446282.1;locus_tag=E3V42_01435;product=MutR family transcriptional regulator;protein_id=TMR85248.1;transl_table=11 SOQV01000021.1 Genbank gene 18879 20780 . - . ID=gene-E3V42_01440;Name=E3V42_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01440 SOQV01000021.1 Protein Homology CDS 18879 20780 . - 0 ID=cds-TMR85249.1;Parent=gene-E3V42_01440;Dbxref=NCBI_GP:TMR85249.1;Name=TMR85249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358615.1;locus_tag=E3V42_01440;product=ABC transporter ATP-binding protein;protein_id=TMR85249.1;transl_table=11 SOQV01000021.1 Genbank gene 21208 21483 . - . ID=gene-E3V42_01445;Name=E3V42_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01445 SOQV01000021.1 Protein Homology CDS 21208 21483 . - 0 ID=cds-TMR85250.1;Parent=gene-E3V42_01445;Dbxref=NCBI_GP:TMR85250.1;Name=TMR85250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358614.1;locus_tag=E3V42_01445;product=HU family DNA-binding protein;protein_id=TMR85250.1;transl_table=11 SOQV01000021.1 Genbank gene 21589 22428 . - . ID=gene-E3V42_01450;Name=E3V42_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01450 SOQV01000021.1 Protein Homology CDS 21589 22428 . - 0 ID=cds-TMR85251.1;Parent=gene-E3V42_01450;Dbxref=NCBI_GP:TMR85251.1;Name=TMR85251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358613.1;locus_tag=E3V42_01450;product=DegV family protein;protein_id=TMR85251.1;transl_table=11 SOQV01000021.1 Genbank gene 22569 23417 . + . ID=gene-E3V42_01455;Name=E3V42_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01455 SOQV01000021.1 Protein Homology CDS 22569 23417 . + 0 ID=cds-TMR85252.1;Parent=gene-E3V42_01455;Dbxref=NCBI_GP:TMR85252.1;Name=TMR85252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358612.1;locus_tag=E3V42_01455;product=YitT family protein;protein_id=TMR85252.1;transl_table=11 SOQV01000021.1 Genbank gene 23510 24427 . - . ID=gene-E3V42_01460;Name=E3V42_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01460 SOQV01000021.1 Protein Homology CDS 23510 24427 . - 0 ID=cds-TMR85253.1;Parent=gene-E3V42_01460;Dbxref=NCBI_GP:TMR85253.1;Name=TMR85253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358611.1;locus_tag=E3V42_01460;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=TMR85253.1;transl_table=11 SOQV01000021.1 Genbank pseudogene 24735 24863 . + . ID=gene-E3V42_01465;Name=E3V42_01465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01465;pseudo=true SOQV01000021.1 Protein Homology CDS 24735 24863 . + 0 ID=cds-E3V42_01465;Parent=gene-E3V42_01465;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446195.1;locus_tag=E3V42_01465;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000021.1 Genbank pseudogene 24906 25009 . + . ID=gene-E3V42_01470;Name=E3V42_01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01470;pseudo=true SOQV01000021.1 Protein Homology CDS 24906 25009 . + 0 ID=cds-E3V42_01470;Parent=gene-E3V42_01470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446197.1;locus_tag=E3V42_01470;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQV01000021.1 Genbank gene 25275 25568 . - . ID=gene-E3V42_01475;Name=E3V42_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01475 SOQV01000021.1 Protein Homology CDS 25275 25568 . - 0 ID=cds-TMR85254.1;Parent=gene-E3V42_01475;Dbxref=NCBI_GP:TMR85254.1;Name=TMR85254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=E3V42_01475;product=50S ribosomal protein L27;protein_id=TMR85254.1;transl_table=11 SOQV01000021.1 Genbank gene 25585 25929 . - . ID=gene-E3V42_01480;Name=E3V42_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01480 SOQV01000021.1 Protein Homology CDS 25585 25929 . - 0 ID=cds-TMR85255.1;Parent=gene-E3V42_01480;Dbxref=NCBI_GP:TMR85255.1;Name=TMR85255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613691.1;locus_tag=E3V42_01480;product=ribosomal-processing cysteine protease Prp;protein_id=TMR85255.1;transl_table=11 SOQV01000021.1 Genbank gene 25945 26259 . - . ID=gene-E3V42_01485;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=E3V42_01485 SOQV01000021.1 Protein Homology CDS 25945 26259 . - 0 ID=cds-TMR85256.1;Parent=gene-E3V42_01485;Dbxref=NCBI_GP:TMR85256.1;Name=TMR85256.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=E3V42_01485;product=50S ribosomal protein L21;protein_id=TMR85256.1;transl_table=11 SOQV01000021.1 Genbank gene 26371 26466 . + . ID=gene-E3V42_01490;Name=E3V42_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01490 SOQV01000021.1 Protein Homology CDS 26371 26466 . + 0 ID=cds-TMR85257.1;Parent=gene-E3V42_01490;Dbxref=NCBI_GP:TMR85257.1;Name=TMR85257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03128.12;locus_tag=E3V42_01490;product=hypothetical protein;protein_id=TMR85257.1;transl_table=11 SOQV01000021.1 Genbank gene 26479 27177 . - . ID=gene-E3V42_01495;Name=E3V42_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01495 SOQV01000021.1 Protein Homology CDS 26479 27177 . - 0 ID=cds-TMR85258.1;Parent=gene-E3V42_01495;Dbxref=NCBI_GP:TMR85258.1;Name=TMR85258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358605.1;locus_tag=E3V42_01495;product=DUF1275 domain-containing protein;protein_id=TMR85258.1;transl_table=11 SOQV01000021.1 Genbank gene 27580 27879 . + . ID=gene-E3V42_01500;Name=E3V42_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01500 SOQV01000021.1 Protein Homology CDS 27580 27879 . + 0 ID=cds-TMR85259.1;Parent=gene-E3V42_01500;Dbxref=NCBI_GP:TMR85259.1;Name=TMR85259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358604.1;locus_tag=E3V42_01500;product=YbaB/EbfC family nucleoid-associated protein;protein_id=TMR85259.1;transl_table=11 SOQV01000021.1 Genbank gene 28223 29197 . - . ID=gene-E3V42_01505;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=E3V42_01505 SOQV01000021.1 Protein Homology CDS 28223 29197 . - 0 ID=cds-TMR85260.1;Parent=gene-E3V42_01505;Dbxref=NCBI_GP:TMR85260.1;Name=TMR85260.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358601.1;locus_tag=E3V42_01505;product=phosphate acetyltransferase;protein_id=TMR85260.1;transl_table=11 SOQV01000021.1 Genbank gene 29241 30137 . - . ID=gene-E3V42_01510;Name=E3V42_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01510 SOQV01000021.1 Protein Homology CDS 29241 30137 . - 0 ID=cds-TMR85261.1;Parent=gene-E3V42_01510;Dbxref=NCBI_GP:TMR85261.1;Name=TMR85261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446291.1;locus_tag=E3V42_01510;product=RluA family pseudouridine synthase;protein_id=TMR85261.1;transl_table=11 SOQV01000021.1 Genbank gene 30134 30952 . - . ID=gene-E3V42_01515;Name=E3V42_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01515 SOQV01000021.1 Protein Homology CDS 30134 30952 . - 0 ID=cds-TMR85262.1;Parent=gene-E3V42_01515;Dbxref=NCBI_GP:TMR85262.1;Name=TMR85262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446292.1;locus_tag=E3V42_01515;product=NAD kinase;protein_id=TMR85262.1;transl_table=11 SOQV01000021.1 Genbank gene 30936 31607 . - . ID=gene-E3V42_01520;Name=E3V42_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01520 SOQV01000021.1 Protein Homology CDS 30936 31607 . - 0 ID=cds-TMR85263.1;Parent=gene-E3V42_01520;Dbxref=NCBI_GP:TMR85263.1;Name=TMR85263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358598.1;locus_tag=E3V42_01520;product=GTP pyrophosphokinase family protein;protein_id=TMR85263.1;transl_table=11 SOQV01000021.1 Genbank gene 31955 32152 . - . ID=gene-E3V42_01525;Name=E3V42_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01525 SOQV01000021.1 Protein Homology CDS 31955 32152 . - 0 ID=cds-TMR85264.1;Parent=gene-E3V42_01525;Dbxref=NCBI_GP:TMR85264.1;Name=TMR85264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511309.1;locus_tag=E3V42_01525;product=hypothetical protein;protein_id=TMR85264.1;transl_table=11 SOQV01000021.1 Genbank gene 32306 32494 . + . ID=gene-E3V42_01530;Name=E3V42_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01530 SOQV01000021.1 Protein Homology CDS 32306 32494 . + 0 ID=cds-TMR85265.1;Parent=gene-E3V42_01530;Dbxref=NCBI_GP:TMR85265.1;Name=TMR85265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260128.1;locus_tag=E3V42_01530;product=hypothetical protein;protein_id=TMR85265.1;transl_table=11 SOQV01000021.1 Genbank gene 32841 33272 . - . ID=gene-E3V42_01535;Name=E3V42_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01535 SOQV01000021.1 Protein Homology CDS 32841 33272 . - 0 ID=cds-TMR85266.1;Parent=gene-E3V42_01535;Dbxref=NCBI_GP:TMR85266.1;Name=TMR85266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379281.1;locus_tag=E3V42_01535;product=DUF2335 domain-containing protein;protein_id=TMR85266.1;transl_table=11 SOQV01000021.1 Genbank gene 33256 33462 . - . ID=gene-E3V42_01540;Name=E3V42_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01540 SOQV01000021.1 Protein Homology CDS 33256 33462 . - 0 ID=cds-TMR85267.1;Parent=gene-E3V42_01540;Dbxref=NCBI_GP:TMR85267.1;Name=TMR85267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917045.1;locus_tag=E3V42_01540;product=hypothetical protein;protein_id=TMR85267.1;transl_table=11 SOQV01000021.1 Genbank gene 33639 34412 . - . ID=gene-E3V42_01545;Name=E3V42_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01545 SOQV01000021.1 Protein Homology CDS 33639 34412 . - 0 ID=cds-TMR85268.1;Parent=gene-E3V42_01545;Dbxref=NCBI_GP:TMR85268.1;Name=TMR85268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860723.1;locus_tag=E3V42_01545;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR85268.1;transl_table=11 ##sequence-region SOQV01000022.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000022.1 Genbank region 1 527 . + . ID=SOQV01000022.1:1..527;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000022.1 Genbank gene 15 455 . + . ID=gene-E3V42_01550;Name=E3V42_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01550 SOQV01000022.1 Protein Homology CDS 15 455 . + 0 ID=cds-TMR85171.1;Parent=gene-E3V42_01550;Dbxref=NCBI_GP:TMR85171.1;Name=TMR85171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_01550;product=transposase;protein_id=TMR85171.1;transl_table=11 ##sequence-region SOQV01000023.1 1 15382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000023.1 Genbank region 1 15382 . + . ID=SOQV01000023.1:1..15382;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000023.1 Genbank pseudogene 348 552 . + . ID=gene-E3V42_01555;Name=E3V42_01555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01555;pseudo=true SOQV01000023.1 Protein Homology CDS 348 552 . + 0 ID=cds-E3V42_01555;Parent=gene-E3V42_01555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779614.1;locus_tag=E3V42_01555;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 SOQV01000023.1 Genbank gene 695 1483 . + . ID=gene-E3V42_01560;Name=E3V42_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01560 SOQV01000023.1 Protein Homology CDS 695 1483 . + 0 ID=cds-TMR85154.1;Parent=gene-E3V42_01560;Dbxref=NCBI_GP:TMR85154.1;Name=TMR85154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445944.1;locus_tag=E3V42_01560;product=alpha/beta hydrolase;protein_id=TMR85154.1;transl_table=11 SOQV01000023.1 Genbank gene 1514 2032 . + . ID=gene-E3V42_01565;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=E3V42_01565 SOQV01000023.1 Protein Homology CDS 1514 2032 . + 0 ID=cds-TMR85155.1;Parent=gene-E3V42_01565;Dbxref=NCBI_GP:TMR85155.1;Name=TMR85155.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445945.1;locus_tag=E3V42_01565;product=ribosome maturation factor RimM;protein_id=TMR85155.1;transl_table=11 SOQV01000023.1 Genbank gene 2022 2741 . + . ID=gene-E3V42_01570;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=E3V42_01570 SOQV01000023.1 Protein Homology CDS 2022 2741 . + 0 ID=cds-TMR85156.1;Parent=gene-E3V42_01570;Dbxref=NCBI_GP:TMR85156.1;Name=TMR85156.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445946.1;locus_tag=E3V42_01570;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=TMR85156.1;transl_table=11 SOQV01000023.1 Genbank gene 2753 3091 . + . ID=gene-E3V42_01575;Name=E3V42_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01575 SOQV01000023.1 Protein Homology CDS 2753 3091 . + 0 ID=cds-TMR85157.1;Parent=gene-E3V42_01575;Dbxref=NCBI_GP:TMR85157.1;Name=TMR85157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358282.1;locus_tag=E3V42_01575;product=hypothetical protein;protein_id=TMR85157.1;transl_table=11 SOQV01000023.1 Genbank gene 3122 3442 . - . ID=gene-E3V42_01580;Name=E3V42_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01580 SOQV01000023.1 Protein Homology CDS 3122 3442 . - 0 ID=cds-TMR85158.1;Parent=gene-E3V42_01580;Dbxref=NCBI_GP:TMR85158.1;Name=TMR85158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358283.1;locus_tag=E3V42_01580;product=hypothetical protein;protein_id=TMR85158.1;transl_table=11 SOQV01000023.1 Genbank gene 3541 3756 . + . ID=gene-E3V42_01585;Name=E3V42_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01585 SOQV01000023.1 Protein Homology CDS 3541 3756 . + 0 ID=cds-TMR85159.1;Parent=gene-E3V42_01585;Dbxref=NCBI_GP:TMR85159.1;Name=TMR85159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807422.1;locus_tag=E3V42_01585;product=hypothetical protein;protein_id=TMR85159.1;transl_table=11 SOQV01000023.1 Genbank gene 3810 4346 . - . ID=gene-E3V42_01590;Name=E3V42_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01590 SOQV01000023.1 Protein Homology CDS 3810 4346 . - 0 ID=cds-TMR85160.1;Parent=gene-E3V42_01590;Dbxref=NCBI_GP:TMR85160.1;Name=TMR85160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445950.1;locus_tag=E3V42_01590;product=biotin transporter BioY;protein_id=TMR85160.1;transl_table=11 SOQV01000023.1 Genbank gene 4580 4918 . + . ID=gene-E3V42_01595;Name=E3V42_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01595 SOQV01000023.1 Protein Homology CDS 4580 4918 . + 0 ID=cds-TMR85161.1;Parent=gene-E3V42_01595;Dbxref=NCBI_GP:TMR85161.1;Name=TMR85161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746107.1;locus_tag=E3V42_01595;product=hypothetical protein;protein_id=TMR85161.1;transl_table=11 SOQV01000023.1 Genbank gene 4984 6966 . + . ID=gene-E3V42_01600;Name=E3V42_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01600 SOQV01000023.1 Protein Homology CDS 4984 6966 . + 0 ID=cds-TMR85162.1;Parent=gene-E3V42_01600;Dbxref=NCBI_GP:TMR85162.1;Name=TMR85162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445951.1;locus_tag=E3V42_01600;product=ABC transporter permease;protein_id=TMR85162.1;transl_table=11 SOQV01000023.1 Genbank gene 6963 7586 . + . ID=gene-E3V42_01605;Name=E3V42_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01605 SOQV01000023.1 Protein Homology CDS 6963 7586 . + 0 ID=cds-TMR85163.1;Parent=gene-E3V42_01605;Dbxref=NCBI_GP:TMR85163.1;Name=TMR85163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445952.1;locus_tag=E3V42_01605;product=ATP-binding cassette domain-containing protein;protein_id=TMR85163.1;transl_table=11 SOQV01000023.1 Genbank gene 7583 8083 . + . ID=gene-E3V42_01610;Name=E3V42_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01610 SOQV01000023.1 Protein Homology CDS 7583 8083 . + 0 ID=cds-TMR85164.1;Parent=gene-E3V42_01610;Dbxref=NCBI_GP:TMR85164.1;Name=TMR85164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445953.1;locus_tag=E3V42_01610;product=hypothetical protein;protein_id=TMR85164.1;transl_table=11 SOQV01000023.1 Genbank gene 8249 9595 . - . ID=gene-E3V42_01615;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=E3V42_01615 SOQV01000023.1 Protein Homology CDS 8249 9595 . - 0 ID=cds-TMR85165.1;Parent=gene-E3V42_01615;Dbxref=NCBI_GP:TMR85165.1;Name=TMR85165.1;gbkey=CDS;gene=gor;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358286.1;locus_tag=E3V42_01615;product=glutathione-disulfide reductase;protein_id=TMR85165.1;transl_table=11 SOQV01000023.1 Genbank gene 9883 11076 . + . ID=gene-E3V42_01620;Name=E3V42_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01620 SOQV01000023.1 Protein Homology CDS 9883 11076 . + 0 ID=cds-TMR85166.1;Parent=gene-E3V42_01620;Dbxref=NCBI_GP:TMR85166.1;Name=TMR85166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358287.1;locus_tag=E3V42_01620;product=efflux RND transporter periplasmic adaptor subunit;protein_id=TMR85166.1;transl_table=11 SOQV01000023.1 Genbank gene 11060 11761 . + . ID=gene-E3V42_01625;Name=E3V42_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01625 SOQV01000023.1 Protein Homology CDS 11060 11761 . + 0 ID=cds-TMR85167.1;Parent=gene-E3V42_01625;Dbxref=NCBI_GP:TMR85167.1;Name=TMR85167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358288.1;locus_tag=E3V42_01625;product=ABC transporter ATP-binding protein;protein_id=TMR85167.1;transl_table=11 SOQV01000023.1 Genbank gene 11763 13022 . + . ID=gene-E3V42_01630;Name=E3V42_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01630 SOQV01000023.1 Protein Homology CDS 11763 13022 . + 0 ID=cds-TMR85168.1;Parent=gene-E3V42_01630;Dbxref=NCBI_GP:TMR85168.1;Name=TMR85168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358289.1;locus_tag=E3V42_01630;product=FtsX-like permease family protein;protein_id=TMR85168.1;transl_table=11 SOQV01000023.1 Genbank gene 13146 15143 . + . ID=gene-E3V42_01635;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=E3V42_01635 SOQV01000023.1 Protein Homology CDS 13146 15143 . + 0 ID=cds-TMR85169.1;Parent=gene-E3V42_01635;Dbxref=NCBI_GP:TMR85169.1;Name=TMR85169.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358290.2;locus_tag=E3V42_01635;product=methionine--tRNA ligase;protein_id=TMR85169.1;transl_table=11 SOQV01000023.1 Genbank gene 15322 15382 . + . ID=gene-E3V42_01640;Name=E3V42_01640;end_range=15382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01640;partial=true SOQV01000023.1 Protein Homology CDS 15322 15382 . + 0 ID=cds-TMR85170.1;Parent=gene-E3V42_01640;Dbxref=NCBI_GP:TMR85170.1;Name=TMR85170.1;end_range=15382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V42_01640;partial=true;product=IS200/IS605 family transposase;protein_id=TMR85170.1;transl_table=11 ##sequence-region SOQV01000024.1 1 18139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000024.1 Genbank region 1 18139 . + . ID=SOQV01000024.1:1..18139;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000024.1 Genbank pseudogene 147 221 . - . ID=gene-E3V42_01645;Name=E3V42_01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01645;pseudo=true SOQV01000024.1 Protein Homology CDS 147 221 . - 0 ID=cds-E3V42_01645;Parent=gene-E3V42_01645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_01645;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000024.1 Genbank gene 278 1765 . + . ID=gene-E3V42_01650;Name=tacF;gbkey=Gene;gene=tacF;gene_biotype=protein_coding;locus_tag=E3V42_01650 SOQV01000024.1 Protein Homology CDS 278 1765 . + 0 ID=cds-TMR85140.1;Parent=gene-E3V42_01650;Dbxref=NCBI_GP:TMR85140.1;Name=TMR85140.1;gbkey=CDS;gene=tacF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358743.1;locus_tag=E3V42_01650;product=type IV teichoic acid flippase;protein_id=TMR85140.1;transl_table=11 SOQV01000024.1 Genbank gene 1775 2578 . + . ID=gene-E3V42_01655;Name=E3V42_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01655 SOQV01000024.1 Protein Homology CDS 1775 2578 . + 0 ID=cds-TMR85141.1;Parent=gene-E3V42_01655;Dbxref=NCBI_GP:TMR85141.1;Name=TMR85141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358744.1;locus_tag=E3V42_01655;product=phosphorylcholine transferase LicD;protein_id=TMR85141.1;transl_table=11 SOQV01000024.1 Genbank gene 2580 3389 . + . ID=gene-E3V42_01660;Name=E3V42_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01660 SOQV01000024.1 Protein Homology CDS 2580 3389 . + 0 ID=cds-TMR85142.1;Parent=gene-E3V42_01660;Dbxref=NCBI_GP:TMR85142.1;Name=TMR85142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358745.1;locus_tag=E3V42_01660;product=phosphorylcholine transferase LicD;protein_id=TMR85142.1;transl_table=11 SOQV01000024.1 Genbank gene 3661 6837 . - . ID=gene-E3V42_01665;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=E3V42_01665 SOQV01000024.1 Protein Homology CDS 3661 6837 . - 0 ID=cds-TMR85143.1;Parent=gene-E3V42_01665;Dbxref=NCBI_GP:TMR85143.1;Name=TMR85143.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446343.1;locus_tag=E3V42_01665;product=carbamoyl-phosphate synthase large subunit;protein_id=TMR85143.1;transl_table=11 SOQV01000024.1 Genbank gene 7285 8364 . - . ID=gene-E3V42_01670;Name=E3V42_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01670 SOQV01000024.1 Protein Homology CDS 7285 8364 . - 0 ID=cds-TMR85144.1;Parent=gene-E3V42_01670;Dbxref=NCBI_GP:TMR85144.1;Name=TMR85144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358747.1;locus_tag=E3V42_01670;product=carbamoyl-phosphate synthase small subunit;protein_id=TMR85144.1;transl_table=11 SOQV01000024.1 Genbank gene 8414 9337 . - . ID=gene-E3V42_01675;Name=E3V42_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01675 SOQV01000024.1 Protein Homology CDS 8414 9337 . - 0 ID=cds-TMR85145.1;Parent=gene-E3V42_01675;Dbxref=NCBI_GP:TMR85145.1;Name=TMR85145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446345.1;locus_tag=E3V42_01675;product=aspartate carbamoyltransferase catalytic subunit;protein_id=TMR85145.1;transl_table=11 SOQV01000024.1 Genbank gene 9356 9877 . - . ID=gene-E3V42_01680;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=E3V42_01680 SOQV01000024.1 Protein Homology CDS 9356 9877 . - 0 ID=cds-TMR85146.1;Parent=gene-E3V42_01680;Dbxref=NCBI_GP:TMR85146.1;Name=TMR85146.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358749.1;locus_tag=E3V42_01680;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=TMR85146.1;transl_table=11 SOQV01000024.1 Genbank gene 10088 10717 . - . ID=gene-E3V42_01685;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=E3V42_01685 SOQV01000024.1 Protein Homology CDS 10088 10717 . - 0 ID=cds-TMR85147.1;Parent=gene-E3V42_01685;Dbxref=NCBI_GP:TMR85147.1;Name=TMR85147.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358750.1;locus_tag=E3V42_01685;product=endonuclease III;protein_id=TMR85147.1;transl_table=11 SOQV01000024.1 Genbank gene 10717 11259 . - . ID=gene-E3V42_01690;Name=E3V42_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01690 SOQV01000024.1 Protein Homology CDS 10717 11259 . - 0 ID=cds-TMR85148.1;Parent=gene-E3V42_01690;Dbxref=NCBI_GP:TMR85148.1;Name=TMR85148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358751.1;locus_tag=E3V42_01690;product=DUF177 domain-containing protein;protein_id=TMR85148.1;transl_table=11 SOQV01000024.1 Genbank gene 11884 13410 . + . ID=gene-E3V42_01695;Name=E3V42_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01695 SOQV01000024.1 Protein Homology CDS 11884 13410 . + 0 ID=cds-TMR85149.1;Parent=gene-E3V42_01695;Dbxref=NCBI_GP:TMR85149.1;Name=TMR85149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358754.1;locus_tag=E3V42_01695;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=TMR85149.1;transl_table=11 SOQV01000024.1 Genbank gene 13558 14457 . - . ID=gene-E3V42_01700;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=E3V42_01700 SOQV01000024.1 Protein Homology CDS 13558 14457 . - 0 ID=cds-TMR85150.1;Parent=gene-E3V42_01700;Dbxref=NCBI_GP:TMR85150.1;Name=TMR85150.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446351.1;locus_tag=E3V42_01700;product=zinc metalloprotease HtpX;protein_id=TMR85150.1;transl_table=11 SOQV01000024.1 Genbank gene 14459 15019 . - . ID=gene-E3V42_01705;Name=E3V42_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01705 SOQV01000024.1 Protein Homology CDS 14459 15019 . - 0 ID=cds-TMR85151.1;Parent=gene-E3V42_01705;Dbxref=NCBI_GP:TMR85151.1;Name=TMR85151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358756.1;locus_tag=E3V42_01705;product=LemA family protein;protein_id=TMR85151.1;transl_table=11 SOQV01000024.1 Genbank gene 15113 15826 . + . ID=gene-E3V42_01710;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=E3V42_01710 SOQV01000024.1 Protein Homology CDS 15113 15826 . + 0 ID=cds-TMR85152.1;Parent=gene-E3V42_01710;Dbxref=NCBI_GP:TMR85152.1;Name=TMR85152.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446353.1;locus_tag=E3V42_01710;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=TMR85152.1;transl_table=11 SOQV01000024.1 Genbank gene 16093 17412 . + . ID=gene-E3V42_01715;Name=E3V42_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01715 SOQV01000024.1 Protein Homology CDS 16093 17412 . + 0 ID=cds-TMR85153.1;Parent=gene-E3V42_01715;Dbxref=NCBI_GP:TMR85153.1;Name=TMR85153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358758.1;locus_tag=E3V42_01715;product=uracil permease;protein_id=TMR85153.1;transl_table=11 SOQV01000024.1 Genbank pseudogene 17830 18139 . - . ID=gene-E3V42_01720;Name=E3V42_01720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01720;pseudo=true SOQV01000024.1 Protein Homology CDS 17830 18139 . - 2 ID=cds-E3V42_01720;Parent=gene-E3V42_01720;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_01720;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000025.1 1 7240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000025.1 Genbank region 1 7240 . + . ID=SOQV01000025.1:1..7240;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000025.1 Genbank gene 1 297 . - . ID=gene-E3V42_01725;Name=E3V42_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01725;partial=true;start_range=.,1 SOQV01000025.1 Protein Homology CDS 1 297 . - 0 ID=cds-TMR85115.1;Parent=gene-E3V42_01725;Dbxref=NCBI_GP:TMR85115.1;Name=TMR85115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445618.1;locus_tag=E3V42_01725;partial=true;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR85115.1;start_range=.,1;transl_table=11 SOQV01000025.1 Genbank gene 297 632 . - . ID=gene-E3V42_01730;Name=E3V42_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01730 SOQV01000025.1 Protein Homology CDS 297 632 . - 0 ID=cds-TMR85116.1;Parent=gene-E3V42_01730;Dbxref=NCBI_GP:TMR85116.1;Name=TMR85116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445617.1;locus_tag=E3V42_01730;product=phage holin;protein_id=TMR85116.1;transl_table=11 SOQV01000025.1 Genbank gene 973 1755 . - . ID=gene-E3V42_01735;Name=E3V42_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01735 SOQV01000025.1 Protein Homology CDS 973 1755 . - 0 ID=cds-TMR85117.1;Parent=gene-E3V42_01735;Dbxref=NCBI_GP:TMR85117.1;Name=TMR85117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067166.1;locus_tag=E3V42_01735;product=hypothetical protein;protein_id=TMR85117.1;transl_table=11 SOQV01000025.1 Genbank gene 1761 2081 . - . ID=gene-E3V42_01740;Name=E3V42_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01740 SOQV01000025.1 Protein Homology CDS 1761 2081 . - 0 ID=cds-TMR85118.1;Parent=gene-E3V42_01740;Dbxref=NCBI_GP:TMR85118.1;Name=TMR85118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381729.1;locus_tag=E3V42_01740;product=hypothetical protein;protein_id=TMR85118.1;transl_table=11 SOQV01000025.1 Genbank gene 2088 2564 . - . ID=gene-E3V42_01745;Name=E3V42_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01745 SOQV01000025.1 Protein Homology CDS 2088 2564 . - 0 ID=cds-TMR85119.1;Parent=gene-E3V42_01745;Dbxref=NCBI_GP:TMR85119.1;Name=TMR85119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=E3V42_01745;product=hypothetical protein;protein_id=TMR85119.1;transl_table=11 SOQV01000025.1 Genbank gene 2580 2858 . - . ID=gene-E3V42_01750;Name=E3V42_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01750 SOQV01000025.1 Protein Homology CDS 2580 2858 . - 0 ID=cds-TMR85120.1;Parent=gene-E3V42_01750;Dbxref=NCBI_GP:TMR85120.1;Name=TMR85120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134981.1;locus_tag=E3V42_01750;product=hypothetical protein;protein_id=TMR85120.1;transl_table=11 SOQV01000025.1 Genbank gene 3014 3547 . - . ID=gene-E3V42_01755;Name=E3V42_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01755 SOQV01000025.1 Protein Homology CDS 3014 3547 . - 0 ID=cds-TMR85121.1;Parent=gene-E3V42_01755;Dbxref=NCBI_GP:TMR85121.1;Name=TMR85121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105679.1;locus_tag=E3V42_01755;product=hypothetical protein;protein_id=TMR85121.1;transl_table=11 SOQV01000025.1 Genbank gene 3544 3750 . - . ID=gene-E3V42_01760;Name=E3V42_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01760 SOQV01000025.1 Protein Homology CDS 3544 3750 . - 0 ID=cds-TMR85122.1;Parent=gene-E3V42_01760;Dbxref=NCBI_GP:TMR85122.1;Name=TMR85122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368698.1;locus_tag=E3V42_01760;product=hypothetical protein;protein_id=TMR85122.1;transl_table=11 SOQV01000025.1 Genbank gene 3743 7240 . - . ID=gene-E3V42_01765;Name=E3V42_01765;end_range=7240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01765;partial=true SOQV01000025.1 Protein Homology CDS 3743 7240 . - 0 ID=cds-TMR85123.1;Parent=gene-E3V42_01765;Dbxref=NCBI_GP:TMR85123.1;Name=TMR85123.1;end_range=7240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=E3V42_01765;partial=true;product=hypothetical protein;protein_id=TMR85123.1;transl_table=11 ##sequence-region SOQV01000026.1 1 30533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000026.1 Genbank region 1 30533 . + . ID=SOQV01000026.1:1..30533;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000026.1 Genbank gene 1 1008 . - . ID=gene-E3V42_01770;Name=E3V42_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01770;partial=true;start_range=.,1 SOQV01000026.1 Protein Homology CDS 1 1008 . - 0 ID=cds-TMR85067.1;Parent=gene-E3V42_01770;Dbxref=NCBI_GP:TMR85067.1;Name=TMR85067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_01770;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR85067.1;start_range=.,1;transl_table=11 SOQV01000026.1 Genbank pseudogene 1614 1952 . + . ID=gene-E3V42_01775;Name=E3V42_01775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01775;pseudo=true SOQV01000026.1 Protein Homology CDS 1614 1952 . + 0 ID=cds-E3V42_01775;Parent=gene-E3V42_01775;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398391.1;locus_tag=E3V42_01775;product=ISNCY family transposase;pseudo=true;transl_table=11 SOQV01000026.1 Genbank pseudogene 1934 2116 . + . ID=gene-E3V42_01780;Name=E3V42_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01780;pseudo=true SOQV01000026.1 Protein Homology CDS 1934 2116 . + 0 ID=cds-E3V42_01780;Parent=gene-E3V42_01780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284773.1;locus_tag=E3V42_01780;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000026.1 Genbank gene 2388 3005 . - . ID=gene-E3V42_01785;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=E3V42_01785 SOQV01000026.1 Protein Homology CDS 2388 3005 . - 0 ID=cds-TMR85068.1;Parent=gene-E3V42_01785;Dbxref=NCBI_GP:TMR85068.1;Name=TMR85068.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046307.1;locus_tag=E3V42_01785;product=potassium-transporting ATPase subunit KdpC;protein_id=TMR85068.1;transl_table=11 SOQV01000026.1 Genbank gene 3130 5199 . - . ID=gene-E3V42_01790;Name=E3V42_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01790 SOQV01000026.1 Protein Homology CDS 3130 5199 . - 0 ID=cds-TMR85069.1;Parent=gene-E3V42_01790;Dbxref=NCBI_GP:TMR85069.1;Name=TMR85069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893144.1;locus_tag=E3V42_01790;product=K(+)-transporting ATPase subunit B;protein_id=TMR85069.1;transl_table=11 SOQV01000026.1 Genbank gene 5208 6953 . - . ID=gene-E3V42_01795;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=E3V42_01795 SOQV01000026.1 Protein Homology CDS 5208 6953 . - 0 ID=cds-TMR85070.1;Parent=gene-E3V42_01795;Dbxref=NCBI_GP:TMR85070.1;Name=TMR85070.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893148.1;locus_tag=E3V42_01795;product=potassium-transporting ATPase subunit KdpA;protein_id=TMR85070.1;transl_table=11 SOQV01000026.1 Genbank gene 6966 7043 . - . ID=gene-E3V42_01800;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=E3V42_01800 SOQV01000026.1 Protein Homology CDS 6966 7043 . - 0 ID=cds-TMR85086.1;Parent=gene-E3V42_01800;Dbxref=NCBI_GP:TMR85086.1;Name=TMR85086.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896418.1;locus_tag=E3V42_01800;product=K(+)-transporting ATPase subunit F;protein_id=TMR85086.1;transl_table=11 SOQV01000026.1 Genbank gene 7343 8068 . - . ID=gene-E3V42_01805;Name=E3V42_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01805 SOQV01000026.1 Protein Homology CDS 7343 8068 . - 0 ID=cds-TMR85071.1;Parent=gene-E3V42_01805;Dbxref=NCBI_GP:TMR85071.1;Name=TMR85071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046299.1;locus_tag=E3V42_01805;product=response regulator transcription factor;protein_id=TMR85071.1;transl_table=11 SOQV01000026.1 Genbank gene 8058 10691 . - . ID=gene-E3V42_01810;Name=E3V42_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01810 SOQV01000026.1 Protein Homology CDS 8058 10691 . - 0 ID=cds-TMR85072.1;Parent=gene-E3V42_01810;Dbxref=NCBI_GP:TMR85072.1;Name=TMR85072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046297.1;locus_tag=E3V42_01810;product=sensor histidine kinase KdpD;protein_id=TMR85072.1;transl_table=11 SOQV01000026.1 Genbank pseudogene 10769 11637 . + . ID=gene-E3V42_01815;Name=E3V42_01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01815;pseudo=true SOQV01000026.1 Protein Homology CDS 10769 11637 . + 0 ID=cds-E3V42_01815;Parent=gene-E3V42_01815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238800.1;locus_tag=E3V42_01815;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQV01000026.1 Genbank gene 11705 13195 . - . ID=gene-E3V42_01820;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=E3V42_01820 SOQV01000026.1 Protein Homology CDS 11705 13195 . - 0 ID=cds-TMR85073.1;Parent=gene-E3V42_01820;Dbxref=NCBI_GP:TMR85073.1;Name=TMR85073.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358220.1;locus_tag=E3V42_01820;product=lysine--tRNA ligase;protein_id=TMR85073.1;transl_table=11 SOQV01000026.1 Genbank gene 13583 14215 . - . ID=gene-E3V42_01825;Name=E3V42_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01825 SOQV01000026.1 Protein Homology CDS 13583 14215 . - 0 ID=cds-TMR85074.1;Parent=gene-E3V42_01825;Dbxref=NCBI_GP:TMR85074.1;Name=TMR85074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397976.1;locus_tag=E3V42_01825;product=orotate phosphoribosyltransferase;protein_id=TMR85074.1;transl_table=11 SOQV01000026.1 Genbank gene 14249 14950 . - . ID=gene-E3V42_01830;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=E3V42_01830 SOQV01000026.1 Protein Homology CDS 14249 14950 . - 0 ID=cds-TMR85075.1;Parent=gene-E3V42_01830;Dbxref=NCBI_GP:TMR85075.1;Name=TMR85075.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358207.1;locus_tag=E3V42_01830;product=orotidine-5'-phosphate decarboxylase;protein_id=TMR85075.1;transl_table=11 SOQV01000026.1 Genbank pseudogene 15269 15361 . + . ID=gene-E3V42_01835;Name=E3V42_01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01835;pseudo=true SOQV01000026.1 Protein Homology CDS 15269 15361 . + 0 ID=cds-E3V42_01835;Parent=gene-E3V42_01835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516271.1;locus_tag=E3V42_01835;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000026.1 Genbank gene 15696 16409 . - . ID=gene-E3V42_01840;Name=E3V42_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01840 SOQV01000026.1 Protein Homology CDS 15696 16409 . - 0 ID=cds-TMR85076.1;Parent=gene-E3V42_01840;Dbxref=NCBI_GP:TMR85076.1;Name=TMR85076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358205.1;locus_tag=E3V42_01840;product=ABC transporter permease;protein_id=TMR85076.1;transl_table=11 SOQV01000026.1 Genbank pseudogene 16402 17235 . - . ID=gene-E3V42_01845;Name=E3V42_01845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01845;pseudo=true SOQV01000026.1 Protein Homology CDS 16402 17235 . - 0 ID=cds-E3V42_01845;Parent=gene-E3V42_01845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398769.1;locus_tag=E3V42_01845;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 SOQV01000026.1 Genbank pseudogene 17446 18486 . - . ID=gene-E3V42_01850;Name=E3V42_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01850;pseudo=true SOQV01000026.1 Protein Homology CDS 17446 18486 . - 0 ID=cds-E3V42_01850;Parent=gene-E3V42_01850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817174.1;locus_tag=E3V42_01850;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11 SOQV01000026.1 Genbank pseudogene 18589 18777 . - . ID=gene-E3V42_01855;Name=E3V42_01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_01855;pseudo=true SOQV01000026.1 Protein Homology CDS 18589 18777 . - 0 ID=cds-E3V42_01855;Parent=gene-E3V42_01855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828969.1;locus_tag=E3V42_01855;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11 SOQV01000026.1 Genbank gene 18761 19609 . - . ID=gene-E3V42_01860;Name=E3V42_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01860 SOQV01000026.1 Protein Homology CDS 18761 19609 . - 0 ID=cds-TMR85077.1;Parent=gene-E3V42_01860;Dbxref=NCBI_GP:TMR85077.1;Name=TMR85077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358201.1;locus_tag=E3V42_01860;product=peptidase M50 family protein;protein_id=TMR85077.1;transl_table=11 SOQV01000026.1 Genbank gene 20247 21467 . - . ID=gene-E3V42_01865;Name=E3V42_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01865 SOQV01000026.1 Protein Homology CDS 20247 21467 . - 0 ID=cds-TMR85078.1;Parent=gene-E3V42_01865;Dbxref=NCBI_GP:TMR85078.1;Name=TMR85078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446549.1;locus_tag=E3V42_01865;product=cell division protein FtsQ/DivIB;protein_id=TMR85078.1;transl_table=11 SOQV01000026.1 Genbank gene 21477 22535 . - . ID=gene-E3V42_01870;Name=E3V42_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01870 SOQV01000026.1 Protein Homology CDS 21477 22535 . - 0 ID=cds-TMR85079.1;Parent=gene-E3V42_01870;Dbxref=NCBI_GP:TMR85079.1;Name=TMR85079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358198.1;locus_tag=E3V42_01870;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=TMR85079.1;transl_table=11 SOQV01000026.1 Genbank gene 22537 23889 . - . ID=gene-E3V42_01875;Name=E3V42_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01875 SOQV01000026.1 Protein Homology CDS 22537 23889 . - 0 ID=cds-TMR85080.1;Parent=gene-E3V42_01875;Dbxref=NCBI_GP:TMR85080.1;Name=TMR85080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446551.1;locus_tag=E3V42_01875;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TMR85080.1;transl_table=11 SOQV01000026.1 Genbank gene 24098 24739 . - . ID=gene-E3V42_01880;Name=E3V42_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01880 SOQV01000026.1 Protein Homology CDS 24098 24739 . - 0 ID=cds-TMR85081.1;Parent=gene-E3V42_01880;Dbxref=NCBI_GP:TMR85081.1;Name=TMR85081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358196.1;locus_tag=E3V42_01880;product=ABC transporter ATP-binding protein;protein_id=TMR85081.1;transl_table=11 SOQV01000026.1 Genbank gene 24741 26762 . - . ID=gene-E3V42_01885;Name=E3V42_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01885 SOQV01000026.1 Protein Homology CDS 24741 26762 . - 0 ID=cds-TMR85082.1;Parent=gene-E3V42_01885;Dbxref=NCBI_GP:TMR85082.1;Name=TMR85082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358195.1;locus_tag=E3V42_01885;product=bacteriocin-associated integral membrane family protein;protein_id=TMR85082.1;transl_table=11 SOQV01000026.1 Genbank gene 26833 27132 . - . ID=gene-E3V42_01890;Name=E3V42_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01890 SOQV01000026.1 Protein Homology CDS 26833 27132 . - 0 ID=cds-TMR85083.1;Parent=gene-E3V42_01890;Dbxref=NCBI_GP:TMR85083.1;Name=TMR85083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397967.1;locus_tag=E3V42_01890;product=lactococcin 972 family bacteriocin;protein_id=TMR85083.1;transl_table=11 SOQV01000026.1 Genbank gene 28147 28977 . - . ID=gene-E3V42_01895;Name=E3V42_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01895 SOQV01000026.1 GeneMarkS-2+ CDS 28147 28977 . - 0 ID=cds-TMR85084.1;Parent=gene-E3V42_01895;Dbxref=NCBI_GP:TMR85084.1;Name=TMR85084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_01895;product=hypothetical protein;protein_id=TMR85084.1;transl_table=11 SOQV01000026.1 Genbank gene 28981 30126 . - . ID=gene-E3V42_01900;Name=E3V42_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01900 SOQV01000026.1 Protein Homology CDS 28981 30126 . - 0 ID=cds-TMR85085.1;Parent=gene-E3V42_01900;Dbxref=NCBI_GP:TMR85085.1;Name=TMR85085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013671.1;locus_tag=E3V42_01900;product=phage major capsid protein;protein_id=TMR85085.1;transl_table=11 ##sequence-region SOQV01000027.1 1 522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000027.1 Genbank region 1 522 . + . ID=SOQV01000027.1:1..522;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000027.1 Genbank gene 1 522 . + . ID=gene-E3V42_01905;Name=E3V42_01905;end_range=522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01905;partial=true;start_range=.,1 SOQV01000027.1 Protein Homology CDS 1 522 . + 0 ID=cds-TMR85066.1;Parent=gene-E3V42_01905;Dbxref=NCBI_GP:TMR85066.1;Name=TMR85066.1;end_range=522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446457.1;locus_tag=E3V42_01905;partial=true;product=XRE family transcriptional regulator;protein_id=TMR85066.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000028.1 1 5036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000028.1 Genbank region 1 5036 . + . ID=SOQV01000028.1:1..5036;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000028.1 Genbank gene 436 726 . + . ID=gene-E3V42_01910;Name=E3V42_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01910 SOQV01000028.1 Protein Homology CDS 436 726 . + 0 ID=cds-TMR85056.1;Parent=gene-E3V42_01910;Dbxref=NCBI_GP:TMR85056.1;Name=TMR85056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398534.1;locus_tag=E3V42_01910;product=hypothetical protein;protein_id=TMR85056.1;transl_table=11 SOQV01000028.1 Genbank gene 738 1460 . + . ID=gene-E3V42_01915;Name=E3V42_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01915 SOQV01000028.1 Protein Homology CDS 738 1460 . + 0 ID=cds-TMR85057.1;Parent=gene-E3V42_01915;Dbxref=NCBI_GP:TMR85057.1;Name=TMR85057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060361.1;locus_tag=E3V42_01915;product=hypothetical protein;protein_id=TMR85057.1;transl_table=11 SOQV01000028.1 Genbank gene 1471 1794 . + . ID=gene-E3V42_01920;Name=E3V42_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01920 SOQV01000028.1 Protein Homology CDS 1471 1794 . + 0 ID=cds-TMR85058.1;Parent=gene-E3V42_01920;Dbxref=NCBI_GP:TMR85058.1;Name=TMR85058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462820.1;locus_tag=E3V42_01920;product=hypothetical protein;protein_id=TMR85058.1;transl_table=11 SOQV01000028.1 Genbank gene 1807 2103 . + . ID=gene-E3V42_01925;Name=E3V42_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01925 SOQV01000028.1 Protein Homology CDS 1807 2103 . + 0 ID=cds-TMR85059.1;Parent=gene-E3V42_01925;Dbxref=NCBI_GP:TMR85059.1;Name=TMR85059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001156935.1;locus_tag=E3V42_01925;product=hypothetical protein;protein_id=TMR85059.1;transl_table=11 SOQV01000028.1 Genbank gene 2096 2905 . + . ID=gene-E3V42_01930;Name=E3V42_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01930 SOQV01000028.1 Protein Homology CDS 2096 2905 . + 0 ID=cds-TMR85060.1;Parent=gene-E3V42_01930;Dbxref=NCBI_GP:TMR85060.1;Name=TMR85060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289771.1;locus_tag=E3V42_01930;product=DnaD domain protein;protein_id=TMR85060.1;transl_table=11 SOQV01000028.1 Genbank gene 3045 3815 . + . ID=gene-E3V42_01935;Name=E3V42_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01935 SOQV01000028.1 Protein Homology CDS 3045 3815 . + 0 ID=cds-TMR85061.1;Parent=gene-E3V42_01935;Dbxref=NCBI_GP:TMR85061.1;Name=TMR85061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228202.1;locus_tag=E3V42_01935;product=DNA replication protein DnaC;protein_id=TMR85061.1;transl_table=11 SOQV01000028.1 Genbank gene 3830 4024 . + . ID=gene-E3V42_01940;Name=E3V42_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01940 SOQV01000028.1 Protein Homology CDS 3830 4024 . + 0 ID=cds-TMR85062.1;Parent=gene-E3V42_01940;Dbxref=NCBI_GP:TMR85062.1;Name=TMR85062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470305.1;locus_tag=E3V42_01940;product=hypothetical protein;protein_id=TMR85062.1;transl_table=11 SOQV01000028.1 Genbank gene 4024 4248 . + . ID=gene-E3V42_01945;Name=E3V42_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01945 SOQV01000028.1 Protein Homology CDS 4024 4248 . + 0 ID=cds-TMR85063.1;Parent=gene-E3V42_01945;Dbxref=NCBI_GP:TMR85063.1;Name=TMR85063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891962.1;locus_tag=E3V42_01945;product=hypothetical protein;protein_id=TMR85063.1;transl_table=11 SOQV01000028.1 Genbank gene 4339 4734 . + . ID=gene-E3V42_01950;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=E3V42_01950 SOQV01000028.1 Protein Homology CDS 4339 4734 . + 0 ID=cds-TMR85064.1;Parent=gene-E3V42_01950;Dbxref=NCBI_GP:TMR85064.1;Name=TMR85064.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015980196.1;locus_tag=E3V42_01950;product=single-stranded DNA-binding protein;protein_id=TMR85064.1;transl_table=11 SOQV01000028.1 Genbank gene 4750 4917 . + . ID=gene-E3V42_01955;Name=E3V42_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01955 SOQV01000028.1 Protein Homology CDS 4750 4917 . + 0 ID=cds-TMR85065.1;Parent=gene-E3V42_01955;Dbxref=NCBI_GP:TMR85065.1;Name=TMR85065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=E3V42_01955;product=hypothetical protein;protein_id=TMR85065.1;transl_table=11 ##sequence-region SOQV01000029.1 1 5022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000029.1 Genbank region 1 5022 . + . ID=SOQV01000029.1:1..5022;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000029.1 Genbank gene 1 61 . - . ID=gene-E3V42_01960;Name=E3V42_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01960;partial=true;start_range=.,1 SOQV01000029.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR85033.1;Parent=gene-E3V42_01960;Dbxref=NCBI_GP:TMR85033.1;Name=TMR85033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V42_01960;partial=true;product=IS200/IS605 family transposase;protein_id=TMR85033.1;start_range=.,1;transl_table=11 SOQV01000029.1 Genbank gene 367 1176 . - . ID=gene-E3V42_01965;Name=E3V42_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01965 SOQV01000029.1 Protein Homology CDS 367 1176 . - 0 ID=cds-TMR85030.1;Parent=gene-E3V42_01965;Dbxref=NCBI_GP:TMR85030.1;Name=TMR85030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715517.1;locus_tag=E3V42_01965;product=RepB family plasmid replication initiator protein;protein_id=TMR85030.1;transl_table=11 SOQV01000029.1 Genbank gene 2153 3655 . - . ID=gene-E3V42_01970;Name=E3V42_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01970 SOQV01000029.1 Protein Homology CDS 2153 3655 . - 0 ID=cds-TMR85031.1;Parent=gene-E3V42_01970;Dbxref=NCBI_GP:TMR85031.1;Name=TMR85031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121181.1;locus_tag=E3V42_01970;product=plasmid recombination protein;protein_id=TMR85031.1;transl_table=11 SOQV01000029.1 Genbank gene 4079 4381 . - . ID=gene-E3V42_01975;Name=E3V42_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01975 SOQV01000029.1 Protein Homology CDS 4079 4381 . - 0 ID=cds-TMR85034.1;Parent=gene-E3V42_01975;Dbxref=NCBI_GP:TMR85034.1;Name=TMR85034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003007068.1;locus_tag=E3V42_01975;product=hypothetical protein;protein_id=TMR85034.1;transl_table=11 SOQV01000029.1 Genbank gene 4431 4889 . + . ID=gene-E3V42_01980;Name=E3V42_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01980 SOQV01000029.1 GeneMarkS-2+ CDS 4431 4889 . + 0 ID=cds-TMR85032.1;Parent=gene-E3V42_01980;Dbxref=NCBI_GP:TMR85032.1;Name=TMR85032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_01980;product=hypothetical protein;protein_id=TMR85032.1;transl_table=11 ##sequence-region SOQV01000003.1 1 6287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000003.1 Genbank region 1 6287 . + . ID=SOQV01000003.1:1..6287;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000003.1 Genbank gene 372 2189 . - . ID=gene-E3V42_00290;Name=E3V42_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00290 SOQV01000003.1 Protein Homology CDS 372 2189 . - 0 ID=cds-TMR85608.1;Parent=gene-E3V42_00290;Dbxref=NCBI_GP:TMR85608.1;Name=TMR85608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445353.1;locus_tag=E3V42_00290;product=acetyltransferase;protein_id=TMR85608.1;transl_table=11 SOQV01000003.1 Genbank gene 2290 3432 . - . ID=gene-E3V42_00295;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=E3V42_00295 SOQV01000003.1 Protein Homology CDS 2290 3432 . - 0 ID=cds-TMR85609.1;Parent=gene-E3V42_00295;Dbxref=NCBI_GP:TMR85609.1;Name=TMR85609.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298827.1;locus_tag=E3V42_00295;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=TMR85609.1;transl_table=11 SOQV01000003.1 Genbank gene 3549 4427 . + . ID=gene-E3V42_00300;Name=E3V42_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00300 SOQV01000003.1 Protein Homology CDS 3549 4427 . + 0 ID=cds-TMR85610.1;Parent=gene-E3V42_00300;Dbxref=NCBI_GP:TMR85610.1;Name=TMR85610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445351.1;locus_tag=E3V42_00300;product=DUF975 family protein;protein_id=TMR85610.1;transl_table=11 SOQV01000003.1 Genbank pseudogene 4545 5189 . - . ID=gene-E3V42_00305;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=pseudogene;locus_tag=E3V42_00305;pseudo=true SOQV01000003.1 Protein Homology CDS 4545 5189 . - 0 ID=cds-E3V42_00305;Parent=gene-E3V42_00305;Note=internal stop;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445350.1;locus_tag=E3V42_00305;product=pyroglutamyl-peptidase I;pseudo=true;transl_table=11 SOQV01000003.1 Genbank gene 5301 5663 . - . ID=gene-E3V42_00310;Name=E3V42_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00310 SOQV01000003.1 Protein Homology CDS 5301 5663 . - 0 ID=cds-TMR85611.1;Parent=gene-E3V42_00310;Dbxref=NCBI_GP:TMR85611.1;Name=TMR85611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022857.1;locus_tag=E3V42_00310;product=DUF1304 domain-containing protein;protein_id=TMR85611.1;transl_table=11 SOQV01000003.1 Genbank gene 5674 6012 . - . ID=gene-E3V42_00315;Name=E3V42_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00315 SOQV01000003.1 Protein Homology CDS 5674 6012 . - 0 ID=cds-TMR85612.1;Parent=gene-E3V42_00315;Dbxref=NCBI_GP:TMR85612.1;Name=TMR85612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359465.1;locus_tag=E3V42_00315;product=MarR family transcriptional regulator;protein_id=TMR85612.1;transl_table=11 ##sequence-region SOQV01000030.1 1 5480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000030.1 Genbank region 1 5480 . + . ID=SOQV01000030.1:1..5480;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000030.1 Genbank gene 218 1222 . + . ID=gene-E3V42_01985;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=E3V42_01985 SOQV01000030.1 Protein Homology CDS 218 1222 . + 0 ID=cds-TMR85026.1;Parent=gene-E3V42_01985;Dbxref=NCBI_GP:TMR85026.1;Name=TMR85026.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446065.1;locus_tag=E3V42_01985;product=phosphate starvation-inducible protein PhoH;protein_id=TMR85026.1;transl_table=11 SOQV01000030.1 Genbank gene 1435 2004 . + . ID=gene-E3V42_01990;Name=E3V42_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01990 SOQV01000030.1 Protein Homology CDS 1435 2004 . + 0 ID=cds-TMR85027.1;Parent=gene-E3V42_01990;Dbxref=NCBI_GP:TMR85027.1;Name=TMR85027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358449.1;locus_tag=E3V42_01990;product=N-acetyltransferase;protein_id=TMR85027.1;transl_table=11 SOQV01000030.1 Genbank gene 2072 2722 . + . ID=gene-E3V42_01995;Name=E3V42_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_01995 SOQV01000030.1 Protein Homology CDS 2072 2722 . + 0 ID=cds-TMR85028.1;Parent=gene-E3V42_01995;Dbxref=NCBI_GP:TMR85028.1;Name=TMR85028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358450.1;locus_tag=E3V42_01995;product=ComEA family DNA-binding protein;protein_id=TMR85028.1;transl_table=11 SOQV01000030.1 Genbank gene 2706 4940 . + . ID=gene-E3V42_02000;Name=E3V42_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02000 SOQV01000030.1 Protein Homology CDS 2706 4940 . + 0 ID=cds-TMR85029.1;Parent=gene-E3V42_02000;Dbxref=NCBI_GP:TMR85029.1;Name=TMR85029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446068.1;locus_tag=E3V42_02000;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=TMR85029.1;transl_table=11 SOQV01000030.1 Genbank pseudogene 4998 5480 . + . ID=gene-E3V42_02005;Name=E3V42_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02005;pseudo=true SOQV01000030.1 Protein Homology CDS 4998 5480 . + 0 ID=cds-E3V42_02005;Parent=gene-E3V42_02005;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_02005;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000031.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000031.1 Genbank region 1 790 . + . ID=SOQV01000031.1:1..790;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000031.1 Genbank pseudogene 1 657 . + . ID=gene-E3V42_02010;Name=E3V42_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02010;pseudo=true SOQV01000031.1 Protein Homology CDS 1 657 . + 1 ID=cds-E3V42_02010;Parent=gene-E3V42_02010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_02010;product=IS630 family transposase;pseudo=true;transl_table=11 SOQV01000031.1 Genbank pseudogene 658 790 . - . ID=gene-E3V42_02015;Name=E3V42_02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02015;pseudo=true SOQV01000031.1 Protein Homology CDS 658 790 . - 1 ID=cds-E3V42_02015;Parent=gene-E3V42_02015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_02015;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000032.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000032.1 Genbank region 1 536 . + . ID=SOQV01000032.1:1..536;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000032.1 Genbank gene 40 536 . + . ID=gene-E3V42_02020;Name=E3V42_02020;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02020;partial=true SOQV01000032.1 Protein Homology CDS 40 536 . + 0 ID=cds-TMR85020.1;Parent=gene-E3V42_02020;Dbxref=NCBI_GP:TMR85020.1;Name=TMR85020.1;end_range=536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810185.1;locus_tag=E3V42_02020;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=TMR85020.1;transl_table=11 ##sequence-region SOQV01000033.1 1 5372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000033.1 Genbank region 1 5372 . + . ID=SOQV01000033.1:1..5372;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000033.1 Genbank gene 1 242 . - . ID=gene-E3V42_02025;Name=E3V42_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02025;partial=true;start_range=.,1 SOQV01000033.1 Protein Homology CDS 1 242 . - 0 ID=cds-TMR85015.1;Parent=gene-E3V42_02025;Dbxref=NCBI_GP:TMR85015.1;Name=TMR85015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_02025;partial=true;product=transposase;protein_id=TMR85015.1;start_range=.,1;transl_table=11 SOQV01000033.1 Genbank pseudogene 281 694 . + . ID=gene-E3V42_02030;Name=E3V42_02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02030;pseudo=true SOQV01000033.1 Protein Homology CDS 281 694 . + 0 ID=cds-E3V42_02030;Parent=gene-E3V42_02030;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611511.1;locus_tag=E3V42_02030;product=IS3 family transposase;pseudo=true;transl_table=11 SOQV01000033.1 Genbank gene 1356 2162 . + . ID=gene-E3V42_02035;Name=E3V42_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02035 SOQV01000033.1 Protein Homology CDS 1356 2162 . + 0 ID=cds-TMR85016.1;Parent=gene-E3V42_02035;Dbxref=NCBI_GP:TMR85016.1;Name=TMR85016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445271.1;locus_tag=E3V42_02035;product=hypothetical protein;protein_id=TMR85016.1;transl_table=11 SOQV01000033.1 Genbank gene 2184 3431 . + . ID=gene-E3V42_02040;Name=E3V42_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02040 SOQV01000033.1 Protein Homology CDS 2184 3431 . + 0 ID=cds-TMR85017.1;Parent=gene-E3V42_02040;Dbxref=NCBI_GP:TMR85017.1;Name=TMR85017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445272.1;locus_tag=E3V42_02040;product=toxic anion resistance protein;protein_id=TMR85017.1;transl_table=11 SOQV01000033.1 Genbank gene 3547 4824 . - . ID=gene-E3V42_02045;Name=E3V42_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02045 SOQV01000033.1 Protein Homology CDS 3547 4824 . - 0 ID=cds-TMR85018.1;Parent=gene-E3V42_02045;Dbxref=NCBI_GP:TMR85018.1;Name=TMR85018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926699.1;locus_tag=E3V42_02045;product=FRG domain-containing protein;protein_id=TMR85018.1;transl_table=11 SOQV01000033.1 Genbank gene 4835 5372 . - . ID=gene-E3V42_02050;Name=E3V42_02050;end_range=5372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02050;partial=true SOQV01000033.1 Protein Homology CDS 4835 5372 . - 1 ID=cds-TMR85019.1;Parent=gene-E3V42_02050;Dbxref=NCBI_GP:TMR85019.1;Name=TMR85019.1;end_range=5372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335401.1;locus_tag=E3V42_02050;partial=true;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR85019.1;transl_table=11 ##sequence-region SOQV01000034.1 1 16022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000034.1 Genbank region 1 16022 . + . ID=SOQV01000034.1:1..16022;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000034.1 Genbank gene 1 441 . + . ID=gene-E3V42_02055;Name=E3V42_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02055;partial=true;start_range=.,1 SOQV01000034.1 Protein Homology CDS 1 441 . + 0 ID=cds-TMR84972.1;Parent=gene-E3V42_02055;Dbxref=NCBI_GP:TMR84972.1;Name=TMR84972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=E3V42_02055;partial=true;product=IS3 family transposase;protein_id=TMR84972.1;start_range=.,1;transl_table=11 SOQV01000034.1 Genbank gene 733 927 . - . ID=gene-E3V42_02060;Name=E3V42_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02060 SOQV01000034.1 Protein Homology CDS 733 927 . - 0 ID=cds-TMR84973.1;Parent=gene-E3V42_02060;Dbxref=NCBI_GP:TMR84973.1;Name=TMR84973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315043.1;locus_tag=E3V42_02060;product=hypothetical protein;protein_id=TMR84973.1;transl_table=11 SOQV01000034.1 Genbank gene 938 1276 . + . ID=gene-E3V42_02065;Name=E3V42_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02065 SOQV01000034.1 Protein Homology CDS 938 1276 . + 0 ID=cds-TMR84974.1;Parent=gene-E3V42_02065;Dbxref=NCBI_GP:TMR84974.1;Name=TMR84974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811282.1;locus_tag=E3V42_02065;product=lantibiotic-modifying protein;protein_id=TMR84974.1;transl_table=11 SOQV01000034.1 Genbank gene 1176 1763 . + . ID=gene-E3V42_02070;Name=E3V42_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02070 SOQV01000034.1 Protein Homology CDS 1176 1763 . + 0 ID=cds-TMR84975.1;Parent=gene-E3V42_02070;Dbxref=NCBI_GP:TMR84975.1;Name=TMR84975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818729.1;locus_tag=E3V42_02070;product=lanthionine synthetase;protein_id=TMR84975.1;transl_table=11 SOQV01000034.1 Genbank gene 1806 3038 . + . ID=gene-E3V42_02075;Name=E3V42_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02075 SOQV01000034.1 Protein Homology CDS 1806 3038 . + 0 ID=cds-TMR84976.1;Parent=gene-E3V42_02075;Dbxref=NCBI_GP:TMR84976.1;Name=TMR84976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765682.1;locus_tag=E3V42_02075;product=MFS transporter;protein_id=TMR84976.1;transl_table=11 SOQV01000034.1 Genbank gene 3157 4155 . - . ID=gene-E3V42_02080;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=protein_coding;locus_tag=E3V42_02080 SOQV01000034.1 Protein Homology CDS 3157 4155 . - 0 ID=cds-TMR84977.1;Parent=gene-E3V42_02080;Dbxref=NCBI_GP:TMR84977.1;Name=TMR84977.1;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V42_02080;product=choline-binding protein CbpJ;protein_id=TMR84977.1;transl_table=11 SOQV01000034.1 Genbank gene 4253 4942 . - . ID=gene-E3V42_02085;Name=E3V42_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02085 SOQV01000034.1 Protein Homology CDS 4253 4942 . - 0 ID=cds-TMR84978.1;Parent=gene-E3V42_02085;Dbxref=NCBI_GP:TMR84978.1;Name=TMR84978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357930.1;locus_tag=E3V42_02085;product=response regulator transcription factor;protein_id=TMR84978.1;transl_table=11 SOQV01000034.1 Genbank gene 4954 6378 . - . ID=gene-E3V42_02090;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=E3V42_02090 SOQV01000034.1 Protein Homology CDS 4954 6378 . - 0 ID=cds-TMR84979.1;Parent=gene-E3V42_02090;Dbxref=NCBI_GP:TMR84979.1;Name=TMR84979.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185725.1;locus_tag=E3V42_02090;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=TMR84979.1;transl_table=11 SOQV01000034.1 Genbank gene 6454 7860 . - . ID=gene-E3V42_02095;Name=mapZ;gbkey=Gene;gene=mapZ;gene_biotype=protein_coding;locus_tag=E3V42_02095 SOQV01000034.1 Protein Homology CDS 6454 7860 . - 0 ID=cds-TMR84980.1;Parent=gene-E3V42_02095;Dbxref=NCBI_GP:TMR84980.1;Name=TMR84980.1;gbkey=CDS;gene=mapZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357928.1;locus_tag=E3V42_02095;product=mid-cell-anchored protein MapZ;protein_id=TMR84980.1;transl_table=11 SOQV01000034.1 Genbank gene 7873 9030 . - . ID=gene-E3V42_02100;Name=E3V42_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02100 SOQV01000034.1 Protein Homology CDS 7873 9030 . - 0 ID=cds-TMR84981.1;Parent=gene-E3V42_02100;Dbxref=NCBI_GP:TMR84981.1;Name=TMR84981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446853.1;locus_tag=E3V42_02100;product=class I SAM-dependent RNA methyltransferase;protein_id=TMR84981.1;transl_table=11 SOQV01000034.1 Genbank gene 9115 9495 . - . ID=gene-E3V42_02105;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=E3V42_02105 SOQV01000034.1 cmsearch RNase_P_RNA 9115 9495 . - . ID=rna-E3V42_02105;Parent=gene-E3V42_02105;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_02105;product=RNase P RNA component class B SOQV01000034.1 cmsearch exon 9115 9495 . - . ID=exon-E3V42_02105-1;Parent=rna-E3V42_02105;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_02105;product=RNase P RNA component class B SOQV01000034.1 Genbank gene 9516 9857 . - . ID=gene-E3V42_02110;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=E3V42_02110 SOQV01000034.1 Protein Homology CDS 9516 9857 . - 0 ID=cds-TMR84982.1;Parent=gene-E3V42_02110;Dbxref=NCBI_GP:TMR84982.1;Name=TMR84982.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446854.1;locus_tag=E3V42_02110;product=cell division regulator GpsB;protein_id=TMR84982.1;transl_table=11 SOQV01000034.1 Genbank gene 9927 10454 . - . ID=gene-E3V42_02115;Name=E3V42_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02115 SOQV01000034.1 Protein Homology CDS 9927 10454 . - 0 ID=cds-TMR84983.1;Parent=gene-E3V42_02115;Dbxref=NCBI_GP:TMR84983.1;Name=TMR84983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357925.1;locus_tag=E3V42_02115;product=DUF1273 domain-containing protein;protein_id=TMR84983.1;transl_table=11 SOQV01000034.1 Genbank gene 10522 11106 . + . ID=gene-E3V42_02120;Name=E3V42_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02120 SOQV01000034.1 Protein Homology CDS 10522 11106 . + 0 ID=cds-TMR84984.1;Parent=gene-E3V42_02120;Dbxref=NCBI_GP:TMR84984.1;Name=TMR84984.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04892.10;locus_tag=E3V42_02120;product=VanZ family protein;protein_id=TMR84984.1;transl_table=11 SOQV01000034.1 Genbank gene 11862 12242 . - . ID=gene-E3V42_02125;Name=E3V42_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02125 SOQV01000034.1 Protein Homology CDS 11862 12242 . - 0 ID=cds-TMR84985.1;Parent=gene-E3V42_02125;Dbxref=NCBI_GP:TMR84985.1;Name=TMR84985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284930.1;locus_tag=E3V42_02125;product=hypothetical protein;protein_id=TMR84985.1;transl_table=11 SOQV01000034.1 Genbank gene 12656 13252 . + . ID=gene-E3V42_02130;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=E3V42_02130 SOQV01000034.1 Protein Homology CDS 12656 13252 . + 0 ID=cds-TMR84986.1;Parent=gene-E3V42_02130;Dbxref=NCBI_GP:TMR84986.1;Name=TMR84986.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357924.1;locus_tag=E3V42_02130;product=Holliday junction resolvase RecU;protein_id=TMR84986.1;transl_table=11 SOQV01000034.1 Genbank gene 13249 15444 . + . ID=gene-E3V42_02135;Name=E3V42_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02135 SOQV01000034.1 Protein Homology CDS 13249 15444 . + 0 ID=cds-TMR84987.1;Parent=gene-E3V42_02135;Dbxref=NCBI_GP:TMR84987.1;Name=TMR84987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446857.1;locus_tag=E3V42_02135;product=PBP1A family penicillin-binding protein;protein_id=TMR84987.1;transl_table=11 SOQV01000034.1 Genbank gene 15582 16022 . - . ID=gene-E3V42_02140;Name=E3V42_02140;end_range=16022,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02140;partial=true SOQV01000034.1 Protein Homology CDS 15582 16022 . - 0 ID=cds-TMR84988.1;Parent=gene-E3V42_02140;Dbxref=NCBI_GP:TMR84988.1;Name=TMR84988.1;end_range=16022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=E3V42_02140;partial=true;product=IS3 family transposase;protein_id=TMR84988.1;transl_table=11 ##sequence-region SOQV01000035.1 1 19740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000035.1 Genbank region 1 19740 . + . ID=SOQV01000035.1:1..19740;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000035.1 Genbank gene 1 1210 . - . ID=gene-E3V42_02145;Name=E3V42_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02145;partial=true;start_range=.,1 SOQV01000035.1 Protein Homology CDS 1 1210 . - 0 ID=cds-TMR84940.1;Parent=gene-E3V42_02145;Dbxref=NCBI_GP:TMR84940.1;Name=TMR84940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=E3V42_02145;partial=true;product=hypothetical protein;protein_id=TMR84940.1;start_range=.,1;transl_table=11 SOQV01000035.1 Genbank gene 1207 1905 . - . ID=gene-E3V42_02150;Name=E3V42_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02150 SOQV01000035.1 Protein Homology CDS 1207 1905 . - 0 ID=cds-TMR84941.1;Parent=gene-E3V42_02150;Dbxref=NCBI_GP:TMR84941.1;Name=TMR84941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499602.1;locus_tag=E3V42_02150;product=phage tail protein;protein_id=TMR84941.1;transl_table=11 SOQV01000035.1 Genbank gene 1905 6080 . - . ID=gene-E3V42_02155;Name=E3V42_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02155 SOQV01000035.1 Protein Homology CDS 1905 6080 . - 0 ID=cds-TMR84942.1;Parent=gene-E3V42_02155;Dbxref=NCBI_GP:TMR84942.1;Name=TMR84942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146321.1;locus_tag=E3V42_02155;product=phage tail tape measure protein;protein_id=TMR84942.1;transl_table=11 SOQV01000035.1 Genbank gene 6137 6367 . - . ID=gene-E3V42_02160;Name=E3V42_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02160 SOQV01000035.1 Protein Homology CDS 6137 6367 . - 0 ID=cds-TMR84943.1;Parent=gene-E3V42_02160;Dbxref=NCBI_GP:TMR84943.1;Name=TMR84943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087359.1;locus_tag=E3V42_02160;product=hypothetical protein;protein_id=TMR84943.1;transl_table=11 SOQV01000035.1 Genbank gene 6616 6909 . - . ID=gene-E3V42_02165;Name=E3V42_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02165 SOQV01000035.1 Protein Homology CDS 6616 6909 . - 0 ID=cds-TMR84944.1;Parent=gene-E3V42_02165;Dbxref=NCBI_GP:TMR84944.1;Name=TMR84944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151570.1;locus_tag=E3V42_02165;product=hypothetical protein;protein_id=TMR84944.1;transl_table=11 SOQV01000035.1 Genbank gene 6955 7551 . - . ID=gene-E3V42_02170;Name=E3V42_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02170 SOQV01000035.1 Protein Homology CDS 6955 7551 . - 0 ID=cds-TMR84945.1;Parent=gene-E3V42_02170;Dbxref=NCBI_GP:TMR84945.1;Name=TMR84945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216339.1;locus_tag=E3V42_02170;product=phage tail protein;protein_id=TMR84945.1;transl_table=11 SOQV01000035.1 Genbank gene 7568 7948 . - . ID=gene-E3V42_02175;Name=E3V42_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02175 SOQV01000035.1 Protein Homology CDS 7568 7948 . - 0 ID=cds-TMR84946.1;Parent=gene-E3V42_02175;Dbxref=NCBI_GP:TMR84946.1;Name=TMR84946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588569.1;locus_tag=E3V42_02175;product=hypothetical protein;protein_id=TMR84946.1;transl_table=11 SOQV01000035.1 Genbank gene 7948 8346 . - . ID=gene-E3V42_02180;Name=E3V42_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02180 SOQV01000035.1 Protein Homology CDS 7948 8346 . - 0 ID=cds-TMR84947.1;Parent=gene-E3V42_02180;Dbxref=NCBI_GP:TMR84947.1;Name=TMR84947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094502.1;locus_tag=E3V42_02180;product=hypothetical protein;protein_id=TMR84947.1;transl_table=11 SOQV01000035.1 Genbank gene 8339 8728 . - . ID=gene-E3V42_02185;Name=E3V42_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02185 SOQV01000035.1 Protein Homology CDS 8339 8728 . - 0 ID=cds-TMR84948.1;Parent=gene-E3V42_02185;Dbxref=NCBI_GP:TMR84948.1;Name=TMR84948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830391.1;locus_tag=E3V42_02185;product=phage head-tail adapter protein;protein_id=TMR84948.1;transl_table=11 SOQV01000035.1 Genbank gene 8715 8903 . - . ID=gene-E3V42_02190;Name=E3V42_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02190 SOQV01000035.1 Protein Homology CDS 8715 8903 . - 0 ID=cds-TMR84949.1;Parent=gene-E3V42_02190;Dbxref=NCBI_GP:TMR84949.1;Name=TMR84949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598695.1;locus_tag=E3V42_02190;product=hypothetical protein;protein_id=TMR84949.1;transl_table=11 SOQV01000035.1 Genbank gene 8896 9186 . - . ID=gene-E3V42_02195;Name=E3V42_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02195 SOQV01000035.1 Protein Homology CDS 8896 9186 . - 0 ID=cds-TMR84950.1;Parent=gene-E3V42_02195;Dbxref=NCBI_GP:TMR84950.1;Name=TMR84950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401889.1;locus_tag=E3V42_02195;product=phage gp6-like head-tail connector protein;protein_id=TMR84950.1;transl_table=11 SOQV01000035.1 Genbank gene 9200 10315 . - . ID=gene-E3V42_02200;Name=E3V42_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02200 SOQV01000035.1 Protein Homology CDS 9200 10315 . - 0 ID=cds-TMR84951.1;Parent=gene-E3V42_02200;Dbxref=NCBI_GP:TMR84951.1;Name=TMR84951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976934.1;locus_tag=E3V42_02200;product=phage major capsid protein;protein_id=TMR84951.1;transl_table=11 SOQV01000035.1 Genbank gene 10334 11056 . - . ID=gene-E3V42_02205;Name=E3V42_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02205 SOQV01000035.1 Protein Homology CDS 10334 11056 . - 0 ID=cds-TMR84952.1;Parent=gene-E3V42_02205;Dbxref=NCBI_GP:TMR84952.1;Name=TMR84952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152604.1;locus_tag=E3V42_02205;product=Clp protease ClpP;protein_id=TMR84952.1;transl_table=11 SOQV01000035.1 Genbank gene 11037 12185 . - . ID=gene-E3V42_02210;Name=E3V42_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02210 SOQV01000035.1 Protein Homology CDS 11037 12185 . - 0 ID=cds-TMR84953.1;Parent=gene-E3V42_02210;Dbxref=NCBI_GP:TMR84953.1;Name=TMR84953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506468.1;locus_tag=E3V42_02210;product=phage portal protein;protein_id=TMR84953.1;transl_table=11 SOQV01000035.1 Genbank gene 12241 13881 . - . ID=gene-E3V42_02215;Name=E3V42_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02215 SOQV01000035.1 Protein Homology CDS 12241 13881 . - 0 ID=cds-TMR84954.1;Parent=gene-E3V42_02215;Dbxref=NCBI_GP:TMR84954.1;Name=TMR84954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623346.1;locus_tag=E3V42_02215;product=terminase large subunit;protein_id=TMR84954.1;transl_table=11 SOQV01000035.1 Genbank gene 13878 14216 . - . ID=gene-E3V42_02220;Name=E3V42_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02220 SOQV01000035.1 Protein Homology CDS 13878 14216 . - 0 ID=cds-TMR84955.1;Parent=gene-E3V42_02220;Dbxref=NCBI_GP:TMR84955.1;Name=TMR84955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000393459.1;locus_tag=E3V42_02220;product=hypothetical protein;protein_id=TMR84955.1;transl_table=11 SOQV01000035.1 Genbank gene 14336 14632 . - . ID=gene-E3V42_02225;Name=E3V42_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02225 SOQV01000035.1 Protein Homology CDS 14336 14632 . - 0 ID=cds-TMR84956.1;Parent=gene-E3V42_02225;Dbxref=NCBI_GP:TMR84956.1;Name=TMR84956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573817.1;locus_tag=E3V42_02225;product=HNH endonuclease;protein_id=TMR84956.1;transl_table=11 SOQV01000035.1 Genbank gene 14846 15388 . - . ID=gene-E3V42_02230;Name=E3V42_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02230 SOQV01000035.1 Protein Homology CDS 14846 15388 . - 0 ID=cds-TMR84957.1;Parent=gene-E3V42_02230;Dbxref=NCBI_GP:TMR84957.1;Name=TMR84957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003029111.1;locus_tag=E3V42_02230;product=site-specific integrase;protein_id=TMR84957.1;transl_table=11 SOQV01000035.1 Genbank gene 15688 16116 . - . ID=gene-E3V42_02235;Name=E3V42_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02235 SOQV01000035.1 Protein Homology CDS 15688 16116 . - 0 ID=cds-TMR84958.1;Parent=gene-E3V42_02235;Dbxref=NCBI_GP:TMR84958.1;Name=TMR84958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=E3V42_02235;product=transcriptional regulator;protein_id=TMR84958.1;transl_table=11 SOQV01000035.1 Genbank gene 16187 16417 . - . ID=gene-E3V42_02240;Name=E3V42_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02240 SOQV01000035.1 Protein Homology CDS 16187 16417 . - 0 ID=cds-TMR84959.1;Parent=gene-E3V42_02240;Dbxref=NCBI_GP:TMR84959.1;Name=TMR84959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998323.1;locus_tag=E3V42_02240;product=XRE family transcriptional regulator;protein_id=TMR84959.1;transl_table=11 SOQV01000035.1 Genbank gene 16407 16586 . - . ID=gene-E3V42_02245;Name=E3V42_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02245 SOQV01000035.1 Protein Homology CDS 16407 16586 . - 0 ID=cds-TMR84960.1;Parent=gene-E3V42_02245;Dbxref=NCBI_GP:TMR84960.1;Name=TMR84960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007110.1;locus_tag=E3V42_02245;product=hypothetical protein;protein_id=TMR84960.1;transl_table=11 SOQV01000035.1 Genbank gene 16579 16815 . - . ID=gene-E3V42_02250;Name=E3V42_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02250 SOQV01000035.1 Protein Homology CDS 16579 16815 . - 0 ID=cds-TMR84961.1;Parent=gene-E3V42_02250;Dbxref=NCBI_GP:TMR84961.1;Name=TMR84961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067623.1;locus_tag=E3V42_02250;product=DUF3310 domain-containing protein;protein_id=TMR84961.1;transl_table=11 SOQV01000035.1 Genbank gene 16812 17234 . - . ID=gene-E3V42_02255;Name=E3V42_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02255 SOQV01000035.1 Protein Homology CDS 16812 17234 . - 0 ID=cds-TMR84962.1;Parent=gene-E3V42_02255;Dbxref=NCBI_GP:TMR84962.1;Name=TMR84962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187974.1;locus_tag=E3V42_02255;product=hypothetical protein;protein_id=TMR84962.1;transl_table=11 SOQV01000035.1 Genbank gene 17231 17722 . - . ID=gene-E3V42_02260;Name=E3V42_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02260 SOQV01000035.1 Protein Homology CDS 17231 17722 . - 0 ID=cds-TMR84963.1;Parent=gene-E3V42_02260;Dbxref=NCBI_GP:TMR84963.1;Name=TMR84963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022916.1;locus_tag=E3V42_02260;product=DNA-binding protein;protein_id=TMR84963.1;transl_table=11 SOQV01000035.1 Genbank gene 17719 17979 . - . ID=gene-E3V42_02265;Name=E3V42_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02265 SOQV01000035.1 Protein Homology CDS 17719 17979 . - 0 ID=cds-TMR84964.1;Parent=gene-E3V42_02265;Dbxref=NCBI_GP:TMR84964.1;Name=TMR84964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=E3V42_02265;product=DUF1372 family protein;protein_id=TMR84964.1;transl_table=11 SOQV01000035.1 Genbank gene 17976 18452 . - . ID=gene-E3V42_02270;Name=E3V42_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02270 SOQV01000035.1 Protein Homology CDS 17976 18452 . - 0 ID=cds-TMR84965.1;Parent=gene-E3V42_02270;Dbxref=NCBI_GP:TMR84965.1;Name=TMR84965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502465.1;locus_tag=E3V42_02270;product=class I SAM-dependent methyltransferase;protein_id=TMR84965.1;transl_table=11 SOQV01000035.1 Genbank gene 18452 18739 . - . ID=gene-E3V42_02275;Name=E3V42_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02275 SOQV01000035.1 Protein Homology CDS 18452 18739 . - 0 ID=cds-TMR84966.1;Parent=gene-E3V42_02275;Dbxref=NCBI_GP:TMR84966.1;Name=TMR84966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194857.1;locus_tag=E3V42_02275;product=hypothetical protein;protein_id=TMR84966.1;transl_table=11 SOQV01000035.1 Genbank gene 18739 19224 . - . ID=gene-E3V42_02280;Name=E3V42_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02280 SOQV01000035.1 Protein Homology CDS 18739 19224 . - 0 ID=cds-TMR84967.1;Parent=gene-E3V42_02280;Dbxref=NCBI_GP:TMR84967.1;Name=TMR84967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021761.1;locus_tag=E3V42_02280;product=DUF1642 domain-containing protein;protein_id=TMR84967.1;transl_table=11 SOQV01000035.1 Genbank gene 19226 19540 . - . ID=gene-E3V42_02285;Name=E3V42_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02285 SOQV01000035.1 Protein Homology CDS 19226 19540 . - 0 ID=cds-TMR84969.1;Parent=gene-E3V42_02285;Dbxref=NCBI_GP:TMR84969.1;Name=TMR84969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854688.1;locus_tag=E3V42_02285;product=hypothetical protein;protein_id=TMR84969.1;transl_table=11 SOQV01000035.1 Genbank gene 19515 19740 . - . ID=gene-E3V42_02290;Name=E3V42_02290;end_range=19740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02290;partial=true SOQV01000035.1 Protein Homology CDS 19515 19740 . - 1 ID=cds-TMR84968.1;Parent=gene-E3V42_02290;Dbxref=NCBI_GP:TMR84968.1;Name=TMR84968.1;end_range=19740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284828.1;locus_tag=E3V42_02290;partial=true;product=hypothetical protein;protein_id=TMR84968.1;transl_table=11 ##sequence-region SOQV01000036.1 1 548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000036.1 Genbank region 1 548 . + . ID=SOQV01000036.1:1..548;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000036.1 Genbank gene 1 347 . + . ID=gene-E3V42_02295;Name=E3V42_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02295;partial=true;start_range=.,1 SOQV01000036.1 Protein Homology CDS 1 347 . + 2 ID=cds-TMR84891.1;Parent=gene-E3V42_02295;Dbxref=NCBI_GP:TMR84891.1;Name=TMR84891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V42_02295;partial=true;product=IS30 family transposase;protein_id=TMR84891.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000037.1 1 26690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000037.1 Genbank region 1 26690 . + . ID=SOQV01000037.1:1..26690;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000037.1 Genbank gene 1 61 . - . ID=gene-E3V42_02300;Name=E3V42_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02300;partial=true;start_range=.,1 SOQV01000037.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR84874.1;Parent=gene-E3V42_02300;Dbxref=NCBI_GP:TMR84874.1;Name=TMR84874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V42_02300;partial=true;product=IS200/IS605 family transposase;protein_id=TMR84874.1;start_range=.,1;transl_table=11 SOQV01000037.1 Genbank gene 376 1269 . - . ID=gene-E3V42_02305;Name=E3V42_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02305 SOQV01000037.1 Protein Homology CDS 376 1269 . - 0 ID=cds-TMR84843.1;Parent=gene-E3V42_02305;Dbxref=NCBI_GP:TMR84843.1;Name=TMR84843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343891.1;locus_tag=E3V42_02305;product=XRE family transcriptional regulator;protein_id=TMR84843.1;transl_table=11 SOQV01000037.1 Genbank gene 1290 1484 . - . ID=gene-E3V42_02310;Name=E3V42_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02310 SOQV01000037.1 Protein Homology CDS 1290 1484 . - 0 ID=cds-TMR84844.1;Parent=gene-E3V42_02310;Dbxref=NCBI_GP:TMR84844.1;Name=TMR84844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757183.1;locus_tag=E3V42_02310;product=hypothetical protein;protein_id=TMR84844.1;transl_table=11 SOQV01000037.1 Genbank gene 1886 2092 . - . ID=gene-E3V42_02315;Name=E3V42_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02315 SOQV01000037.1 Protein Homology CDS 1886 2092 . - 0 ID=cds-TMR84845.1;Parent=gene-E3V42_02315;Dbxref=NCBI_GP:TMR84845.1;Name=TMR84845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445234.1;locus_tag=E3V42_02315;product=bacteriocin immunity protein;protein_id=TMR84845.1;transl_table=11 SOQV01000037.1 Genbank gene 2171 2350 . - . ID=gene-E3V42_02320;Name=E3V42_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02320 SOQV01000037.1 Protein Homology CDS 2171 2350 . - 0 ID=cds-TMR84846.1;Parent=gene-E3V42_02320;Dbxref=NCBI_GP:TMR84846.1;Name=TMR84846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846993.1;locus_tag=E3V42_02320;product=hypothetical protein;protein_id=TMR84846.1;transl_table=11 SOQV01000037.1 Genbank gene 2431 2646 . - . ID=gene-E3V42_02325;Name=E3V42_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02325 SOQV01000037.1 Protein Homology CDS 2431 2646 . - 0 ID=cds-TMR84847.1;Parent=gene-E3V42_02325;Dbxref=NCBI_GP:TMR84847.1;Name=TMR84847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445233.1;locus_tag=E3V42_02325;product=bacteriocin immunity protein;protein_id=TMR84847.1;transl_table=11 SOQV01000037.1 Genbank gene 2650 2817 . - . ID=gene-E3V42_02330;Name=E3V42_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02330 SOQV01000037.1 Protein Homology CDS 2650 2817 . - 0 ID=cds-TMR84848.1;Parent=gene-E3V42_02330;Dbxref=NCBI_GP:TMR84848.1;Name=TMR84848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284951.1;locus_tag=E3V42_02330;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR84848.1;transl_table=11 SOQV01000037.1 Genbank gene 2826 3026 . - . ID=gene-E3V42_02335;Name=E3V42_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02335 SOQV01000037.1 Protein Homology CDS 2826 3026 . - 0 ID=cds-TMR84849.1;Parent=gene-E3V42_02335;Dbxref=NCBI_GP:TMR84849.1;Name=TMR84849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478863.1;locus_tag=E3V42_02335;product=hypothetical protein;protein_id=TMR84849.1;transl_table=11 SOQV01000037.1 Genbank gene 3054 3248 . - . ID=gene-E3V42_02340;Name=E3V42_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02340 SOQV01000037.1 Protein Homology CDS 3054 3248 . - 0 ID=cds-TMR84850.1;Parent=gene-E3V42_02340;Dbxref=NCBI_GP:TMR84850.1;Name=TMR84850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180816.1;locus_tag=E3V42_02340;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR84850.1;transl_table=11 SOQV01000037.1 Genbank gene 3283 3429 . - . ID=gene-E3V42_02345;Name=E3V42_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02345 SOQV01000037.1 Protein Homology CDS 3283 3429 . - 0 ID=cds-TMR84875.1;Parent=gene-E3V42_02345;Dbxref=NCBI_GP:TMR84875.1;Name=TMR84875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=E3V42_02345;product=hypothetical protein;protein_id=TMR84875.1;transl_table=11 SOQV01000037.1 Genbank gene 3450 3578 . - . ID=gene-E3V42_02350;Name=E3V42_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02350 SOQV01000037.1 Protein Homology CDS 3450 3578 . - 0 ID=cds-TMR84851.1;Parent=gene-E3V42_02350;Dbxref=NCBI_GP:TMR84851.1;Name=TMR84851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=E3V42_02350;product=smi_0059.1 family bacteriocin-like peptide;protein_id=TMR84851.1;transl_table=11 SOQV01000037.1 Genbank gene 3820 4866 . - . ID=gene-E3V42_02355;Name=E3V42_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02355 SOQV01000037.1 Protein Homology CDS 3820 4866 . - 0 ID=cds-TMR84852.1;Parent=gene-E3V42_02355;Dbxref=NCBI_GP:TMR84852.1;Name=TMR84852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446391.1;locus_tag=E3V42_02355;product=hypothetical protein;protein_id=TMR84852.1;transl_table=11 SOQV01000037.1 Genbank gene 4896 6293 . - . ID=gene-E3V42_02360;Name=E3V42_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02360 SOQV01000037.1 Protein Homology CDS 4896 6293 . - 0 ID=cds-TMR84853.1;Parent=gene-E3V42_02360;Dbxref=NCBI_GP:TMR84853.1;Name=TMR84853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725077.1;locus_tag=E3V42_02360;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR84853.1;transl_table=11 SOQV01000037.1 Genbank gene 6340 7575 . - . ID=gene-E3V42_02365;Name=E3V42_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02365 SOQV01000037.1 Protein Homology CDS 6340 7575 . - 0 ID=cds-TMR84854.1;Parent=gene-E3V42_02365;Dbxref=NCBI_GP:TMR84854.1;Name=TMR84854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399520.1;locus_tag=E3V42_02365;product=choline-binding protein C;protein_id=TMR84854.1;transl_table=11 SOQV01000037.1 Genbank gene 7774 8361 . - . ID=gene-E3V42_02370;Name=E3V42_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02370 SOQV01000037.1 Protein Homology CDS 7774 8361 . - 0 ID=cds-TMR84855.1;Parent=gene-E3V42_02370;Dbxref=NCBI_GP:TMR84855.1;Name=TMR84855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446388.1;locus_tag=E3V42_02370;product=recombinase family protein;protein_id=TMR84855.1;transl_table=11 SOQV01000037.1 Genbank gene 9107 9337 . - . ID=gene-E3V42_02375;Name=blpU;gbkey=Gene;gene=blpU;gene_biotype=protein_coding;locus_tag=E3V42_02375 SOQV01000037.1 Protein Homology CDS 9107 9337 . - 0 ID=cds-TMR84856.1;Parent=gene-E3V42_02375;Dbxref=NCBI_GP:TMR84856.1;Name=TMR84856.1;gbkey=CDS;gene=blpU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357634.1;locus_tag=E3V42_02375;product=bacteriocin-like peptide BlpU;protein_id=TMR84856.1;transl_table=11 SOQV01000037.1 Genbank gene 9530 9730 . - . ID=gene-E3V42_02380;Name=E3V42_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02380 SOQV01000037.1 Protein Homology CDS 9530 9730 . - 0 ID=cds-TMR84857.1;Parent=gene-E3V42_02380;Dbxref=NCBI_GP:TMR84857.1;Name=TMR84857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055966.1;locus_tag=E3V42_02380;product=bacteriocin;protein_id=TMR84857.1;transl_table=11 SOQV01000037.1 Genbank gene 9760 9951 . - . ID=gene-E3V42_02385;Name=E3V42_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02385 SOQV01000037.1 Protein Homology CDS 9760 9951 . - 0 ID=cds-TMR84858.1;Parent=gene-E3V42_02385;Dbxref=NCBI_GP:TMR84858.1;Name=TMR84858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439599.1;locus_tag=E3V42_02385;product=hypothetical protein;protein_id=TMR84858.1;transl_table=11 SOQV01000037.1 Genbank gene 9971 10153 . - . ID=gene-E3V42_02390;Name=E3V42_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02390 SOQV01000037.1 Protein Homology CDS 9971 10153 . - 0 ID=cds-TMR84859.1;Parent=gene-E3V42_02390;Dbxref=NCBI_GP:TMR84859.1;Name=TMR84859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435077.1;locus_tag=E3V42_02390;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=TMR84859.1;transl_table=11 SOQV01000037.1 Genbank gene 10264 10395 . - . ID=gene-E3V42_02395;Name=E3V42_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02395 SOQV01000037.1 Protein Homology CDS 10264 10395 . - 0 ID=cds-TMR84876.1;Parent=gene-E3V42_02395;Dbxref=NCBI_GP:TMR84876.1;Name=TMR84876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=E3V42_02395;product=hypothetical protein;protein_id=TMR84876.1;transl_table=11 SOQV01000037.1 Genbank gene 10416 10544 . - . ID=gene-E3V42_02400;Name=E3V42_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02400 SOQV01000037.1 Protein Homology CDS 10416 10544 . - 0 ID=cds-TMR84860.1;Parent=gene-E3V42_02400;Dbxref=NCBI_GP:TMR84860.1;Name=TMR84860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=E3V42_02400;product=smi_0059.1 family bacteriocin-like peptide;protein_id=TMR84860.1;transl_table=11 SOQV01000037.1 Genbank gene 11039 11770 . - . ID=gene-E3V42_02405;Name=E3V42_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02405 SOQV01000037.1 Protein Homology CDS 11039 11770 . - 0 ID=cds-TMR84861.1;Parent=gene-E3V42_02405;Dbxref=NCBI_GP:TMR84861.1;Name=TMR84861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445227.1;locus_tag=E3V42_02405;product=response regulator transcription factor;protein_id=TMR84861.1;transl_table=11 SOQV01000037.1 Genbank gene 11767 13113 . - . ID=gene-E3V42_02410;Name=E3V42_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02410 SOQV01000037.1 Protein Homology CDS 11767 13113 . - 0 ID=cds-TMR84862.1;Parent=gene-E3V42_02410;Dbxref=NCBI_GP:TMR84862.1;Name=TMR84862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445226.1;locus_tag=E3V42_02410;product=GHKL domain-containing protein;protein_id=TMR84862.1;transl_table=11 SOQV01000037.1 Genbank gene 13147 13293 . - . ID=gene-E3V42_02415;Name=E3V42_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02415 SOQV01000037.1 Protein Homology CDS 13147 13293 . - 0 ID=cds-TMR84863.1;Parent=gene-E3V42_02415;Dbxref=NCBI_GP:TMR84863.1;Name=TMR84863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445225.1;locus_tag=E3V42_02415;product=smi_0057.1 family bacteriocin-like peptide;protein_id=TMR84863.1;transl_table=11 SOQV01000037.1 Genbank gene 13446 14675 . - . ID=gene-E3V42_02420;Name=E3V42_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02420 SOQV01000037.1 Protein Homology CDS 13446 14675 . - 0 ID=cds-TMR84864.1;Parent=gene-E3V42_02420;Dbxref=NCBI_GP:TMR84864.1;Name=TMR84864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445224.1;locus_tag=E3V42_02420;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR84864.1;transl_table=11 SOQV01000037.1 Genbank gene 14788 15642 . - . ID=gene-E3V42_02425;Name=E3V42_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02425 SOQV01000037.1 Protein Homology CDS 14788 15642 . - 0 ID=cds-TMR84865.1;Parent=gene-E3V42_02425;Dbxref=NCBI_GP:TMR84865.1;Name=TMR84865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976808.1;locus_tag=E3V42_02425;product=hypothetical protein;protein_id=TMR84865.1;transl_table=11 SOQV01000037.1 Genbank gene 15789 15920 . - . ID=gene-E3V42_02430;Name=E3V42_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02430 SOQV01000037.1 Protein Homology CDS 15789 15920 . - 0 ID=cds-TMR84877.1;Parent=gene-E3V42_02430;Dbxref=NCBI_GP:TMR84877.1;Name=TMR84877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_02430;product=DNA alkylation repair protein;protein_id=TMR84877.1;transl_table=11 SOQV01000037.1 Genbank gene 15923 16156 . - . ID=gene-E3V42_02435;Name=E3V42_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02435 SOQV01000037.1 Protein Homology CDS 15923 16156 . - 0 ID=cds-TMR84866.1;Parent=gene-E3V42_02435;Dbxref=NCBI_GP:TMR84866.1;Name=TMR84866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445221.1;locus_tag=E3V42_02435;product=acyl carrier protein;protein_id=TMR84866.1;transl_table=11 SOQV01000037.1 Genbank gene 16162 17154 . - . ID=gene-E3V42_02440;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=E3V42_02440 SOQV01000037.1 Protein Homology CDS 16162 17154 . - 0 ID=cds-TMR84867.1;Parent=gene-E3V42_02440;Dbxref=NCBI_GP:TMR84867.1;Name=TMR84867.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445220.1;locus_tag=E3V42_02440;product=phosphate acyltransferase PlsX;protein_id=TMR84867.1;transl_table=11 SOQV01000037.1 Genbank gene 17151 17921 . - . ID=gene-E3V42_02445;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=E3V42_02445 SOQV01000037.1 Protein Homology CDS 17151 17921 . - 0 ID=cds-TMR84868.1;Parent=gene-E3V42_02445;Dbxref=NCBI_GP:TMR84868.1;Name=TMR84868.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357630.1;locus_tag=E3V42_02445;product=DNA repair protein RecO;protein_id=TMR84868.1;transl_table=11 SOQV01000037.1 Genbank gene 17918 19087 . - . ID=gene-E3V42_02450;Name=E3V42_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02450 SOQV01000037.1 Protein Homology CDS 17918 19087 . - 0 ID=cds-TMR84869.1;Parent=gene-E3V42_02450;Dbxref=NCBI_GP:TMR84869.1;Name=TMR84869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357629.1;locus_tag=E3V42_02450;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR84869.1;transl_table=11 SOQV01000037.1 Genbank gene 19236 20246 . + . ID=gene-E3V42_02455;Name=E3V42_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02455 SOQV01000037.1 Protein Homology CDS 19236 20246 . + 0 ID=cds-TMR84870.1;Parent=gene-E3V42_02455;Dbxref=NCBI_GP:TMR84870.1;Name=TMR84870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445217.1;locus_tag=E3V42_02455;product=YeiH family putative sulfate export transporter;protein_id=TMR84870.1;transl_table=11 SOQV01000037.1 Genbank gene 20435 20872 . - . ID=gene-E3V42_02460;Name=E3V42_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02460 SOQV01000037.1 Protein Homology CDS 20435 20872 . - 0 ID=cds-TMR84871.1;Parent=gene-E3V42_02460;Dbxref=NCBI_GP:TMR84871.1;Name=TMR84871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357627.1;locus_tag=E3V42_02460;product=CoA-binding protein;protein_id=TMR84871.1;transl_table=11 SOQV01000037.1 Genbank gene 20956 23589 . - . ID=gene-E3V42_02465;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=E3V42_02465 SOQV01000037.1 Protein Homology CDS 20956 23589 . - 0 ID=cds-TMR84872.1;Parent=gene-E3V42_02465;Dbxref=NCBI_GP:TMR84872.1;Name=TMR84872.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357626.1;locus_tag=E3V42_02465;product=DNA polymerase I;protein_id=TMR84872.1;transl_table=11 SOQV01000037.1 Genbank pseudogene 23874 24035 . - . ID=gene-E3V42_02470;Name=E3V42_02470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02470;pseudo=true SOQV01000037.1 Protein Homology CDS 23874 24035 . - 0 ID=cds-E3V42_02470;Parent=gene-E3V42_02470;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844241.1;locus_tag=E3V42_02470;product=IS110 family transposase;pseudo=true;transl_table=11 SOQV01000037.1 Genbank pseudogene 24043 24297 . + . ID=gene-E3V42_02475;Name=E3V42_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02475;pseudo=true SOQV01000037.1 Protein Homology CDS 24043 24297 . + 0 ID=cds-E3V42_02475;Parent=gene-E3V42_02475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=E3V42_02475;product=IS66 family transposase;pseudo=true;transl_table=11 SOQV01000037.1 Genbank pseudogene 24368 24526 . + . ID=gene-E3V42_02480;Name=E3V42_02480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02480;pseudo=true SOQV01000037.1 Protein Homology CDS 24368 24526 . + 0 ID=cds-E3V42_02480;Parent=gene-E3V42_02480;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V42_02480;product=transposase domain-containing protein;pseudo=true;transl_table=11 SOQV01000037.1 Genbank gene 24749 25651 . - . ID=gene-E3V42_02485;Name=E3V42_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02485 SOQV01000037.1 Protein Homology CDS 24749 25651 . - 0 ID=cds-TMR84873.1;Parent=gene-E3V42_02485;Dbxref=NCBI_GP:TMR84873.1;Name=TMR84873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757033.1;locus_tag=E3V42_02485;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR84873.1;transl_table=11 SOQV01000037.1 Genbank pseudogene 25878 26130 . - . ID=gene-E3V42_02490;Name=E3V42_02490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02490;pseudo=true SOQV01000037.1 Protein Homology CDS 25878 26130 . - 0 ID=cds-E3V42_02490;Parent=gene-E3V42_02490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839193.1;locus_tag=E3V42_02490;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000037.1 Genbank pseudogene 26131 26690 . - . ID=gene-E3V42_02495;Name=E3V42_02495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02495;pseudo=true SOQV01000037.1 Protein Homology CDS 26131 26690 . - 1 ID=cds-E3V42_02495;Parent=gene-E3V42_02495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_02495;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000038.1 1 65415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000038.1 Genbank region 1 65415 . + . ID=SOQV01000038.1:1..65415;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000038.1 Genbank gene 88 2880 . + . ID=gene-E3V42_02500;Name=E3V42_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02500 SOQV01000038.1 Protein Homology CDS 88 2880 . + 0 ID=cds-TMR84751.1;Parent=gene-E3V42_02500;Dbxref=NCBI_GP:TMR84751.1;Name=TMR84751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085251.1;locus_tag=E3V42_02500;product=class I SAM-dependent DNA methyltransferase;protein_id=TMR84751.1;transl_table=11 SOQV01000038.1 Genbank gene 2877 4808 . + . ID=gene-E3V42_02505;Name=E3V42_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02505 SOQV01000038.1 Protein Homology CDS 2877 4808 . + 0 ID=cds-TMR84752.1;Parent=gene-E3V42_02505;Dbxref=NCBI_GP:TMR84752.1;Name=TMR84752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203246.1;locus_tag=E3V42_02505;product=ATP-dependent helicase;protein_id=TMR84752.1;transl_table=11 SOQV01000038.1 Genbank gene 4801 5955 . + . ID=gene-E3V42_02510;Name=E3V42_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02510 SOQV01000038.1 Protein Homology CDS 4801 5955 . + 0 ID=cds-TMR84753.1;Parent=gene-E3V42_02510;Dbxref=NCBI_GP:TMR84753.1;Name=TMR84753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129157.1;locus_tag=E3V42_02510;product=GIY-YIG nuclease family protein;protein_id=TMR84753.1;transl_table=11 SOQV01000038.1 Genbank gene 6041 6376 . + . ID=gene-E3V42_02515;Name=E3V42_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02515 SOQV01000038.1 Protein Homology CDS 6041 6376 . + 0 ID=cds-TMR84754.1;Parent=gene-E3V42_02515;Dbxref=NCBI_GP:TMR84754.1;Name=TMR84754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661303.1;locus_tag=E3V42_02515;product=hypothetical protein;protein_id=TMR84754.1;transl_table=11 SOQV01000038.1 Genbank gene 6680 7165 . + . ID=gene-E3V42_02520;Name=E3V42_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02520 SOQV01000038.1 Protein Homology CDS 6680 7165 . + 0 ID=cds-TMR84755.1;Parent=gene-E3V42_02520;Dbxref=NCBI_GP:TMR84755.1;Name=TMR84755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445863.1;locus_tag=E3V42_02520;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=TMR84755.1;transl_table=11 SOQV01000038.1 Genbank gene 7187 9805 . + . ID=gene-E3V42_02525;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=E3V42_02525 SOQV01000038.1 Protein Homology CDS 7187 9805 . + 0 ID=cds-TMR84756.1;Parent=gene-E3V42_02525;Dbxref=NCBI_GP:TMR84756.1;Name=TMR84756.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358833.1;locus_tag=E3V42_02525;product=alanine--tRNA ligase;protein_id=TMR84756.1;transl_table=11 SOQV01000038.1 Genbank gene 9895 11349 . - . ID=gene-E3V42_02530;Name=E3V42_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02530 SOQV01000038.1 Protein Homology CDS 9895 11349 . - 0 ID=cds-TMR84757.1;Parent=gene-E3V42_02530;Dbxref=NCBI_GP:TMR84757.1;Name=TMR84757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445865.1;locus_tag=E3V42_02530;product=alpha-amylase;protein_id=TMR84757.1;transl_table=11 SOQV01000038.1 Genbank gene 11529 12278 . + . ID=gene-E3V42_02535;Name=E3V42_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02535 SOQV01000038.1 Protein Homology CDS 11529 12278 . + 0 ID=cds-TMR84758.1;Parent=gene-E3V42_02535;Dbxref=NCBI_GP:TMR84758.1;Name=TMR84758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445866.1;locus_tag=E3V42_02535;product=ABC transporter ATP-binding protein;protein_id=TMR84758.1;transl_table=11 SOQV01000038.1 Genbank gene 12259 13893 . + . ID=gene-E3V42_02540;Name=E3V42_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02540 SOQV01000038.1 Protein Homology CDS 12259 13893 . + 0 ID=cds-TMR84759.1;Parent=gene-E3V42_02540;Dbxref=NCBI_GP:TMR84759.1;Name=TMR84759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445867.1;locus_tag=E3V42_02540;product=hypothetical protein;protein_id=TMR84759.1;transl_table=11 SOQV01000038.1 Genbank gene 13965 14225 . + . ID=gene-E3V42_02545;Name=E3V42_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02545 SOQV01000038.1 Protein Homology CDS 13965 14225 . + 0 ID=cds-TMR84760.1;Parent=gene-E3V42_02545;Dbxref=NCBI_GP:TMR84760.1;Name=TMR84760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590366.1;locus_tag=E3V42_02545;product=hypothetical protein;protein_id=TMR84760.1;transl_table=11 SOQV01000038.1 Genbank gene 14379 14639 . - . ID=gene-E3V42_02550;Name=E3V42_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02550 SOQV01000038.1 Protein Homology CDS 14379 14639 . - 0 ID=cds-TMR84761.1;Parent=gene-E3V42_02550;Dbxref=NCBI_GP:TMR84761.1;Name=TMR84761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694306.1;locus_tag=E3V42_02550;product=hypothetical protein;protein_id=TMR84761.1;transl_table=11 SOQV01000038.1 Genbank gene 14656 16806 . - . ID=gene-E3V42_02555;Name=E3V42_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02555 SOQV01000038.1 Protein Homology CDS 14656 16806 . - 0 ID=cds-TMR84762.1;Parent=gene-E3V42_02555;Dbxref=NCBI_GP:TMR84762.1;Name=TMR84762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445868.1;locus_tag=E3V42_02555;product=LTA synthase family protein;protein_id=TMR84762.1;transl_table=11 SOQV01000038.1 Genbank gene 16914 18086 . + . ID=gene-E3V42_02560;Name=E3V42_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02560 SOQV01000038.1 Protein Homology CDS 16914 18086 . + 0 ID=cds-TMR84763.1;Parent=gene-E3V42_02560;Dbxref=NCBI_GP:TMR84763.1;Name=TMR84763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358829.1;locus_tag=E3V42_02560;product=class I SAM-dependent rRNA methyltransferase;protein_id=TMR84763.1;transl_table=11 SOQV01000038.1 Genbank gene 18083 18760 . + . ID=gene-E3V42_02565;Name=E3V42_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02565 SOQV01000038.1 Protein Homology CDS 18083 18760 . + 0 ID=cds-TMR84764.1;Parent=gene-E3V42_02565;Dbxref=NCBI_GP:TMR84764.1;Name=TMR84764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358828.1;locus_tag=E3V42_02565;product=type I 3-dehydroquinate dehydratase;protein_id=TMR84764.1;transl_table=11 SOQV01000038.1 Genbank gene 18750 19604 . + . ID=gene-E3V42_02570;Name=E3V42_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02570 SOQV01000038.1 Protein Homology CDS 18750 19604 . + 0 ID=cds-TMR84765.1;Parent=gene-E3V42_02570;Dbxref=NCBI_GP:TMR84765.1;Name=TMR84765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358827.1;locus_tag=E3V42_02570;product=shikimate dehydrogenase;protein_id=TMR84765.1;transl_table=11 SOQV01000038.1 Genbank gene 19623 20690 . + . ID=gene-E3V42_02575;Name=E3V42_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02575 SOQV01000038.1 Protein Homology CDS 19623 20690 . + 0 ID=cds-TMR84766.1;Parent=gene-E3V42_02575;Dbxref=NCBI_GP:TMR84766.1;Name=TMR84766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358826.1;locus_tag=E3V42_02575;product=3-dehydroquinate synthase;protein_id=TMR84766.1;transl_table=11 SOQV01000038.1 Genbank gene 20700 21866 . + . ID=gene-E3V42_02580;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=E3V42_02580 SOQV01000038.1 Protein Homology CDS 20700 21866 . + 0 ID=cds-TMR84767.1;Parent=gene-E3V42_02580;Dbxref=NCBI_GP:TMR84767.1;Name=TMR84767.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358825.1;locus_tag=E3V42_02580;product=chorismate synthase;protein_id=TMR84767.1;transl_table=11 SOQV01000038.1 Genbank gene 21876 22979 . + . ID=gene-E3V42_02585;Name=E3V42_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02585 SOQV01000038.1 Protein Homology CDS 21876 22979 . + 0 ID=cds-TMR84768.1;Parent=gene-E3V42_02585;Dbxref=NCBI_GP:TMR84768.1;Name=TMR84768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358824.1;locus_tag=E3V42_02585;product=prephenate dehydrogenase;protein_id=TMR84768.1;transl_table=11 SOQV01000038.1 Genbank gene 23296 23583 . + . ID=gene-E3V42_02590;Name=E3V42_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02590 SOQV01000038.1 GeneMarkS-2+ CDS 23296 23583 . + 0 ID=cds-TMR84769.1;Parent=gene-E3V42_02590;Dbxref=NCBI_GP:TMR84769.1;Name=TMR84769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_02590;product=hypothetical protein;protein_id=TMR84769.1;transl_table=11 SOQV01000038.1 Genbank gene 23637 23975 . + . ID=gene-E3V42_02595;Name=E3V42_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02595 SOQV01000038.1 Protein Homology CDS 23637 23975 . + 0 ID=cds-TMR84770.1;Parent=gene-E3V42_02595;Dbxref=NCBI_GP:TMR84770.1;Name=TMR84770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358823.1;locus_tag=E3V42_02595;product=YlbF/YmcA family competence regulator;protein_id=TMR84770.1;transl_table=11 SOQV01000038.1 Genbank gene 24066 25349 . + . ID=gene-E3V42_02600;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=E3V42_02600 SOQV01000038.1 Protein Homology CDS 24066 25349 . + 0 ID=cds-TMR84771.1;Parent=gene-E3V42_02600;Dbxref=NCBI_GP:TMR84771.1;Name=TMR84771.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445878.1;locus_tag=E3V42_02600;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TMR84771.1;transl_table=11 SOQV01000038.1 Genbank gene 25342 25818 . + . ID=gene-E3V42_02605;Name=E3V42_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02605 SOQV01000038.1 Protein Homology CDS 25342 25818 . + 0 ID=cds-TMR84772.1;Parent=gene-E3V42_02605;Dbxref=NCBI_GP:TMR84772.1;Name=TMR84772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358821.1;locus_tag=E3V42_02605;product=shikimate kinase;protein_id=TMR84772.1;transl_table=11 SOQV01000038.1 Genbank gene 25815 26663 . + . ID=gene-E3V42_02610;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=E3V42_02610 SOQV01000038.1 Protein Homology CDS 25815 26663 . + 0 ID=cds-TMR84773.1;Parent=gene-E3V42_02610;Dbxref=NCBI_GP:TMR84773.1;Name=TMR84773.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358820.1;locus_tag=E3V42_02610;product=prephenate dehydratase;protein_id=TMR84773.1;transl_table=11 SOQV01000038.1 Genbank gene 26660 27934 . + . ID=gene-E3V42_02615;Name=psr;gbkey=Gene;gene=psr;gene_biotype=protein_coding;locus_tag=E3V42_02615 SOQV01000038.1 Protein Homology CDS 26660 27934 . + 0 ID=cds-TMR84774.1;Parent=gene-E3V42_02615;Dbxref=NCBI_GP:TMR84774.1;Name=TMR84774.1;gbkey=CDS;gene=psr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358819.1;locus_tag=E3V42_02615;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase Psr;protein_id=TMR84774.1;transl_table=11 SOQV01000038.1 Genbank gene 28213 29058 . + . ID=gene-E3V42_02620;Name=E3V42_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02620 SOQV01000038.1 Protein Homology CDS 28213 29058 . + 0 ID=cds-TMR84775.1;Parent=gene-E3V42_02620;Dbxref=NCBI_GP:TMR84775.1;Name=TMR84775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445882.1;locus_tag=E3V42_02620;product=phosphorylcholine transferase LicD;protein_id=TMR84775.1;transl_table=11 SOQV01000038.1 Genbank gene 28994 30151 . + . ID=gene-E3V42_02625;Name=E3V42_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02625 SOQV01000038.1 Protein Homology CDS 28994 30151 . + 0 ID=cds-TMR84776.1;Parent=gene-E3V42_02625;Dbxref=NCBI_GP:TMR84776.1;Name=TMR84776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358817.1;locus_tag=E3V42_02625;product=glycosyltransferase;protein_id=TMR84776.1;transl_table=11 SOQV01000038.1 Genbank gene 30153 31139 . + . ID=gene-E3V42_02630;Name=E3V42_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02630 SOQV01000038.1 Protein Homology CDS 30153 31139 . + 0 ID=cds-TMR84777.1;Parent=gene-E3V42_02630;Dbxref=NCBI_GP:TMR84777.1;Name=TMR84777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358816.1;locus_tag=E3V42_02630;product=glycosyltransferase family 2 protein;protein_id=TMR84777.1;transl_table=11 SOQV01000038.1 Genbank gene 31155 32624 . + . ID=gene-E3V42_02635;Name=E3V42_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02635 SOQV01000038.1 Protein Homology CDS 31155 32624 . + 0 ID=cds-TMR84778.1;Parent=gene-E3V42_02635;Dbxref=NCBI_GP:TMR84778.1;Name=TMR84778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445885.1;locus_tag=E3V42_02635;product=O-antigen polysaccharide polymerase Wzy;protein_id=TMR84778.1;transl_table=11 SOQV01000038.1 Genbank gene 32617 33651 . + . ID=gene-E3V42_02640;Name=E3V42_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02640 SOQV01000038.1 Protein Homology CDS 32617 33651 . + 0 ID=cds-TMR84779.1;Parent=gene-E3V42_02640;Dbxref=NCBI_GP:TMR84779.1;Name=TMR84779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358814.1;locus_tag=E3V42_02640;product=prephenate dehydratase;protein_id=TMR84779.1;transl_table=11 SOQV01000038.1 Genbank gene 33853 34590 . + . ID=gene-E3V42_02645;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=E3V42_02645 SOQV01000038.1 Protein Homology CDS 33853 34590 . + 0 ID=cds-TMR84780.1;Parent=gene-E3V42_02645;Dbxref=NCBI_GP:TMR84780.1;Name=TMR84780.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358813.1;locus_tag=E3V42_02645;product=adaptor protein MecA;protein_id=TMR84780.1;transl_table=11 SOQV01000038.1 Genbank gene 34741 36027 . + . ID=gene-E3V42_02650;Name=E3V42_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02650 SOQV01000038.1 Protein Homology CDS 34741 36027 . + 0 ID=cds-TMR84781.1;Parent=gene-E3V42_02650;Dbxref=NCBI_GP:TMR84781.1;Name=TMR84781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358812.2;locus_tag=E3V42_02650;product=homoserine dehydrogenase;protein_id=TMR84781.1;transl_table=11 SOQV01000038.1 Genbank gene 36029 36898 . + . ID=gene-E3V42_02655;Name=E3V42_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02655 SOQV01000038.1 Protein Homology CDS 36029 36898 . + 0 ID=cds-TMR84782.1;Parent=gene-E3V42_02655;Dbxref=NCBI_GP:TMR84782.1;Name=TMR84782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358811.1;locus_tag=E3V42_02655;product=homoserine kinase;protein_id=TMR84782.1;transl_table=11 SOQV01000038.1 Genbank gene 37202 38140 . + . ID=gene-E3V42_02660;Name=E3V42_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02660 SOQV01000038.1 Protein Homology CDS 37202 38140 . + 0 ID=cds-TMR84783.1;Parent=gene-E3V42_02660;Dbxref=NCBI_GP:TMR84783.1;Name=TMR84783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358810.1;locus_tag=E3V42_02660;product=peptide-methionine (R)-S-oxide reductase;protein_id=TMR84783.1;transl_table=11 SOQV01000038.1 Genbank gene 38198 39922 . + . ID=gene-E3V42_02665;Name=E3V42_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02665 SOQV01000038.1 Protein Homology CDS 38198 39922 . + 0 ID=cds-TMR84784.1;Parent=gene-E3V42_02665;Dbxref=NCBI_GP:TMR84784.1;Name=TMR84784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358809.1;locus_tag=E3V42_02665;product=ABC transporter ATP-binding protein;protein_id=TMR84784.1;transl_table=11 SOQV01000038.1 Genbank gene 39924 41672 . + . ID=gene-E3V42_02670;Name=E3V42_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02670 SOQV01000038.1 Protein Homology CDS 39924 41672 . + 0 ID=cds-TMR84785.1;Parent=gene-E3V42_02670;Dbxref=NCBI_GP:TMR84785.1;Name=TMR84785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445892.1;locus_tag=E3V42_02670;product=ABC transporter ATP-binding protein;protein_id=TMR84785.1;transl_table=11 SOQV01000038.1 Genbank gene 42064 43323 . + . ID=gene-E3V42_02675;Name=E3V42_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02675 SOQV01000038.1 Protein Homology CDS 42064 43323 . + 0 ID=cds-TMR84786.1;Parent=gene-E3V42_02675;Dbxref=NCBI_GP:TMR84786.1;Name=TMR84786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397889.1;locus_tag=E3V42_02675;product=TRZ/ATZ family protein;protein_id=TMR84786.1;transl_table=11 SOQV01000038.1 Genbank pseudogene 43384 43569 . - . ID=gene-E3V42_02680;Name=E3V42_02680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02680;pseudo=true SOQV01000038.1 Protein Homology CDS 43384 43569 . - 0 ID=cds-E3V42_02680;Parent=gene-E3V42_02680;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976551.1;locus_tag=E3V42_02680;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000038.1 Genbank gene 43574 44074 . + . ID=gene-E3V42_02685;Name=E3V42_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02685 SOQV01000038.1 Protein Homology CDS 43574 44074 . + 0 ID=cds-TMR84787.1;Parent=gene-E3V42_02685;Dbxref=NCBI_GP:TMR84787.1;Name=TMR84787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=E3V42_02685;product=50S ribosomal protein L10;protein_id=TMR84787.1;transl_table=11 SOQV01000038.1 Genbank gene 44147 44515 . + . ID=gene-E3V42_02690;Name=E3V42_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02690 SOQV01000038.1 Protein Homology CDS 44147 44515 . + 0 ID=cds-TMR84788.1;Parent=gene-E3V42_02690;Dbxref=NCBI_GP:TMR84788.1;Name=TMR84788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=E3V42_02690;product=50S ribosomal protein L7/L12;protein_id=TMR84788.1;transl_table=11 SOQV01000038.1 Genbank gene 44945 46291 . - . ID=gene-E3V42_02695;Name=E3V42_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02695 SOQV01000038.1 Protein Homology CDS 44945 46291 . - 0 ID=cds-TMR84789.1;Parent=gene-E3V42_02695;Dbxref=NCBI_GP:TMR84789.1;Name=TMR84789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358774.1;locus_tag=E3V42_02695;product=NADP-specific glutamate dehydrogenase;protein_id=TMR84789.1;transl_table=11 SOQV01000038.1 Genbank pseudogene 46582 46675 . + . ID=gene-E3V42_02700;Name=E3V42_02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02700;pseudo=true SOQV01000038.1 Protein Homology CDS 46582 46675 . + 0 ID=cds-E3V42_02700;Parent=gene-E3V42_02700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850150.1;locus_tag=E3V42_02700;product=nuclease;pseudo=true;transl_table=11 SOQV01000038.1 Genbank pseudogene 46732 47266 . + . ID=gene-E3V42_02705;Name=E3V42_02705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02705;pseudo=true SOQV01000038.1 Protein Homology CDS 46732 47266 . + 0 ID=cds-E3V42_02705;Parent=gene-E3V42_02705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V42_02705;product=transposase;pseudo=true;transl_table=11 SOQV01000038.1 Genbank gene 47306 47632 . - . ID=gene-E3V42_02710;Name=E3V42_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02710 SOQV01000038.1 Protein Homology CDS 47306 47632 . - 0 ID=cds-TMR84790.1;Parent=gene-E3V42_02710;Dbxref=NCBI_GP:TMR84790.1;Name=TMR84790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V42_02710;product=choline-binding protein;protein_id=TMR84790.1;transl_table=11 SOQV01000038.1 Genbank gene 47643 48071 . - . ID=gene-E3V42_02715;Name=E3V42_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02715 SOQV01000038.1 Protein Homology CDS 47643 48071 . - 0 ID=cds-TMR84791.1;Parent=gene-E3V42_02715;Dbxref=NCBI_GP:TMR84791.1;Name=TMR84791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284893.1;locus_tag=E3V42_02715;product=choline-binding protein C;protein_id=TMR84791.1;transl_table=11 SOQV01000038.1 Genbank gene 48040 48849 . - . ID=gene-E3V42_02720;Name=E3V42_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02720 SOQV01000038.1 Protein Homology CDS 48040 48849 . - 0 ID=cds-TMR84792.1;Parent=gene-E3V42_02720;Dbxref=NCBI_GP:TMR84792.1;Name=TMR84792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358418.1;locus_tag=E3V42_02720;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR84792.1;transl_table=11 SOQV01000038.1 Genbank gene 49121 49342 . + . ID=gene-E3V42_02725;Name=E3V42_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02725 SOQV01000038.1 Protein Homology CDS 49121 49342 . + 0 ID=cds-TMR84793.1;Parent=gene-E3V42_02725;Dbxref=NCBI_GP:TMR84793.1;Name=TMR84793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358419.1;locus_tag=E3V42_02725;product=hypothetical protein;protein_id=TMR84793.1;transl_table=11 SOQV01000038.1 Genbank gene 49384 50055 . + . ID=gene-E3V42_02730;Name=E3V42_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02730 SOQV01000038.1 Protein Homology CDS 49384 50055 . + 0 ID=cds-TMR84794.1;Parent=gene-E3V42_02730;Dbxref=NCBI_GP:TMR84794.1;Name=TMR84794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358420.1;locus_tag=E3V42_02730;product=CPBP family intramembrane metalloprotease;protein_id=TMR84794.1;transl_table=11 SOQV01000038.1 Genbank gene 50148 50312 . - . ID=gene-E3V42_02735;Name=E3V42_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02735 SOQV01000038.1 Protein Homology CDS 50148 50312 . - 0 ID=cds-TMR84795.1;Parent=gene-E3V42_02735;Dbxref=NCBI_GP:TMR84795.1;Name=TMR84795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821532.1;locus_tag=E3V42_02735;product=AraC family transcriptional regulator;protein_id=TMR84795.1;transl_table=11 SOQV01000038.1 Genbank gene 50305 51213 . + . ID=gene-E3V42_02740;Name=E3V42_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02740 SOQV01000038.1 Protein Homology CDS 50305 51213 . + 0 ID=cds-TMR84796.1;Parent=gene-E3V42_02740;Dbxref=NCBI_GP:TMR84796.1;Name=TMR84796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446042.1;locus_tag=E3V42_02740;product=LysR family transcriptional regulator;protein_id=TMR84796.1;transl_table=11 SOQV01000038.1 Genbank gene 51210 51671 . + . ID=gene-E3V42_02745;Name=E3V42_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02745 SOQV01000038.1 Protein Homology CDS 51210 51671 . + 0 ID=cds-TMR84797.1;Parent=gene-E3V42_02745;Dbxref=NCBI_GP:TMR84797.1;Name=TMR84797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358423.1;locus_tag=E3V42_02745;product=signal peptidase II;protein_id=TMR84797.1;transl_table=11 SOQV01000038.1 Genbank gene 51661 52548 . + . ID=gene-E3V42_02750;Name=E3V42_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02750 SOQV01000038.1 Protein Homology CDS 51661 52548 . + 0 ID=cds-TMR84798.1;Parent=gene-E3V42_02750;Dbxref=NCBI_GP:TMR84798.1;Name=TMR84798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446044.1;locus_tag=E3V42_02750;product=RluA family pseudouridine synthase;protein_id=TMR84798.1;transl_table=11 SOQV01000038.1 Genbank gene 52551 54434 . + . ID=gene-E3V42_02755;Name=E3V42_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02755 SOQV01000038.1 Protein Homology CDS 52551 54434 . + 0 ID=cds-TMR84799.1;Parent=gene-E3V42_02755;Dbxref=NCBI_GP:TMR84799.1;Name=TMR84799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358425.1;locus_tag=E3V42_02755;product=MBL fold metallo-hydrolase;protein_id=TMR84799.1;transl_table=11 SOQV01000038.1 Genbank gene 54514 55644 . + . ID=gene-E3V42_02760;Name=E3V42_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02760 SOQV01000038.1 Protein Homology CDS 54514 55644 . + 0 ID=cds-TMR84800.1;Parent=gene-E3V42_02760;Dbxref=NCBI_GP:TMR84800.1;Name=TMR84800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446047.1;locus_tag=E3V42_02760;product=glutamate 5-kinase;protein_id=TMR84800.1;transl_table=11 SOQV01000038.1 Genbank gene 55654 56916 . + . ID=gene-E3V42_02765;Name=E3V42_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02765 SOQV01000038.1 Protein Homology CDS 55654 56916 . + 0 ID=cds-TMR84801.1;Parent=gene-E3V42_02765;Dbxref=NCBI_GP:TMR84801.1;Name=TMR84801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358427.1;locus_tag=E3V42_02765;product=glutamate-5-semialdehyde dehydrogenase;protein_id=TMR84801.1;transl_table=11 SOQV01000038.1 Genbank gene 56920 57717 . + . ID=gene-E3V42_02770;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=E3V42_02770 SOQV01000038.1 Protein Homology CDS 56920 57717 . + 0 ID=cds-TMR84802.1;Parent=gene-E3V42_02770;Dbxref=NCBI_GP:TMR84802.1;Name=TMR84802.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446049.1;locus_tag=E3V42_02770;product=pyrroline-5-carboxylate reductase;protein_id=TMR84802.1;transl_table=11 SOQV01000038.1 Genbank gene 57946 58584 . + . ID=gene-E3V42_02775;Name=E3V42_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02775 SOQV01000038.1 Protein Homology CDS 57946 58584 . + 0 ID=cds-TMR84803.1;Parent=gene-E3V42_02775;Dbxref=NCBI_GP:TMR84803.1;Name=TMR84803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358429.1;locus_tag=E3V42_02775;product=dTMP kinase;protein_id=TMR84803.1;transl_table=11 SOQV01000038.1 Genbank gene 58581 59471 . + . ID=gene-E3V42_02780;Name=E3V42_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02780 SOQV01000038.1 Protein Homology CDS 58581 59471 . + 0 ID=cds-TMR84804.1;Parent=gene-E3V42_02780;Dbxref=NCBI_GP:TMR84804.1;Name=TMR84804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358430.1;locus_tag=E3V42_02780;product=DNA polymerase III subunit delta';protein_id=TMR84804.1;transl_table=11 SOQV01000038.1 Genbank gene 59511 59828 . + . ID=gene-E3V42_02785;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=E3V42_02785 SOQV01000038.1 Protein Homology CDS 59511 59828 . + 0 ID=cds-TMR84805.1;Parent=gene-E3V42_02785;Dbxref=NCBI_GP:TMR84805.1;Name=TMR84805.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446052.1;locus_tag=E3V42_02785;product=DNA replication initiation control protein YabA;protein_id=TMR84805.1;transl_table=11 SOQV01000038.1 Genbank gene 59831 60709 . + . ID=gene-E3V42_02790;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=E3V42_02790 SOQV01000038.1 Protein Homology CDS 59831 60709 . + 0 ID=cds-TMR84806.1;Parent=gene-E3V42_02790;Dbxref=NCBI_GP:TMR84806.1;Name=TMR84806.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166890.1;locus_tag=E3V42_02790;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=TMR84806.1;transl_table=11 SOQV01000038.1 Genbank gene 61380 62714 . + . ID=gene-E3V42_02795;Name=E3V42_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02795 SOQV01000038.1 Protein Homology CDS 61380 62714 . + 0 ID=cds-TMR84807.1;Parent=gene-E3V42_02795;Dbxref=NCBI_GP:TMR84807.1;Name=TMR84807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358438.1;locus_tag=E3V42_02795;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=TMR84807.1;transl_table=11 SOQV01000038.1 Genbank gene 62798 63535 . + . ID=gene-E3V42_02800;Name=E3V42_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02800 SOQV01000038.1 Protein Homology CDS 62798 63535 . + 0 ID=cds-TMR84808.1;Parent=gene-E3V42_02800;Dbxref=NCBI_GP:TMR84808.1;Name=TMR84808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446061.1;locus_tag=E3V42_02800;product=UMP kinase;protein_id=TMR84808.1;transl_table=11 SOQV01000038.1 Genbank gene 63544 64101 . + . ID=gene-E3V42_02805;Name=E3V42_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02805 SOQV01000038.1 Protein Homology CDS 63544 64101 . + 0 ID=cds-TMR84809.1;Parent=gene-E3V42_02805;Dbxref=NCBI_GP:TMR84809.1;Name=TMR84809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=E3V42_02805;product=ribosome recycling factor;protein_id=TMR84809.1;transl_table=11 SOQV01000038.1 Genbank gene 64161 65015 . + . ID=gene-E3V42_02810;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=E3V42_02810 SOQV01000038.1 Protein Homology CDS 64161 65015 . + 0 ID=cds-TMR84810.1;Parent=gene-E3V42_02810;Dbxref=NCBI_GP:TMR84810.1;Name=TMR84810.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446063.1;locus_tag=E3V42_02810;product=RNA-binding virulence regulatory protein CvfB;protein_id=TMR84810.1;transl_table=11 SOQV01000038.1 Genbank gene 65024 65239 . + . ID=gene-E3V42_02815;Name=E3V42_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02815 SOQV01000038.1 Protein Homology CDS 65024 65239 . + 0 ID=cds-TMR84811.1;Parent=gene-E3V42_02815;Dbxref=NCBI_GP:TMR84811.1;Name=TMR84811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446064.1;locus_tag=E3V42_02815;product=YozE family protein;protein_id=TMR84811.1;transl_table=11 ##sequence-region SOQV01000039.1 1 28813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000039.1 Genbank region 1 28813 . + . ID=SOQV01000039.1:1..28813;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000039.1 Genbank pseudogene 235 1935 . + . ID=gene-E3V42_02820;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=pseudogene;locus_tag=E3V42_02820;pseudo=true SOQV01000039.1 Protein Homology CDS 235 1935 . + 0 ID=cds-E3V42_02820;Parent=gene-E3V42_02820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014178.1;locus_tag=E3V42_02820;product=DNA primase;pseudo=true;transl_table=11 SOQV01000039.1 Genbank gene 2013 3122 . + . ID=gene-E3V42_02825;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=E3V42_02825 SOQV01000039.1 Protein Homology CDS 2013 3122 . + 0 ID=cds-TMR84707.1;Parent=gene-E3V42_02825;Dbxref=NCBI_GP:TMR84707.1;Name=TMR84707.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358573.1;locus_tag=E3V42_02825;product=RNA polymerase sigma factor RpoD;protein_id=TMR84707.1;transl_table=11 SOQV01000039.1 Genbank gene 3137 3466 . + . ID=gene-E3V42_02830;Name=E3V42_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02830 SOQV01000039.1 Protein Homology CDS 3137 3466 . + 0 ID=cds-TMR84708.1;Parent=gene-E3V42_02830;Dbxref=NCBI_GP:TMR84708.1;Name=TMR84708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446105.1;locus_tag=E3V42_02830;product=metal-sulfur cluster assembly factor;protein_id=TMR84708.1;transl_table=11 SOQV01000039.1 Genbank gene 3609 4625 . + . ID=gene-E3V42_02835;Name=E3V42_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02835 SOQV01000039.1 Protein Homology CDS 3609 4625 . + 0 ID=cds-TMR84738.1;Parent=gene-E3V42_02835;Dbxref=NCBI_GP:TMR84738.1;Name=TMR84738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446106.1;locus_tag=E3V42_02835;product=glycosyltransferase;protein_id=TMR84738.1;transl_table=11 SOQV01000039.1 Genbank gene 4641 5966 . + . ID=gene-E3V42_02840;Name=E3V42_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02840 SOQV01000039.1 Protein Homology CDS 4641 5966 . + 0 ID=cds-TMR84709.1;Parent=gene-E3V42_02840;Dbxref=NCBI_GP:TMR84709.1;Name=TMR84709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358576.1;locus_tag=E3V42_02840;product=glycosyltransferase family 4 protein;protein_id=TMR84709.1;transl_table=11 SOQV01000039.1 Genbank gene 5996 6172 . + . ID=gene-E3V42_02845;Name=E3V42_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02845 SOQV01000039.1 Protein Homology CDS 5996 6172 . + 0 ID=cds-TMR84739.1;Parent=gene-E3V42_02845;Dbxref=NCBI_GP:TMR84739.1;Name=TMR84739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358577.1;locus_tag=E3V42_02845;product=PspC domain-containing protein;protein_id=TMR84739.1;transl_table=11 SOQV01000039.1 Genbank gene 6231 6365 . + . ID=gene-E3V42_02850;Name=E3V42_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02850 SOQV01000039.1 Protein Homology CDS 6231 6365 . + 0 ID=cds-TMR84710.1;Parent=gene-E3V42_02850;Dbxref=NCBI_GP:TMR84710.1;Name=TMR84710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446109.1;locus_tag=E3V42_02850;product=DUF4044 domain-containing protein;protein_id=TMR84710.1;transl_table=11 SOQV01000039.1 Genbank gene 6428 7738 . + . ID=gene-E3V42_02855;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=E3V42_02855 SOQV01000039.1 Protein Homology CDS 6428 7738 . + 0 ID=cds-TMR84711.1;Parent=gene-E3V42_02855;Dbxref=NCBI_GP:TMR84711.1;Name=TMR84711.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446110.1;locus_tag=E3V42_02855;product=GTPase ObgE;protein_id=TMR84711.1;transl_table=11 SOQV01000039.1 Genbank gene 7748 7906 . + . ID=gene-E3V42_02860;Name=E3V42_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02860 SOQV01000039.1 Protein Homology CDS 7748 7906 . + 0 ID=cds-TMR84712.1;Parent=gene-E3V42_02860;Dbxref=NCBI_GP:TMR84712.1;Name=TMR84712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446111.1;locus_tag=E3V42_02860;product=hypothetical protein;protein_id=TMR84712.1;transl_table=11 SOQV01000039.1 Genbank pseudogene 8883 8948 . - . ID=gene-E3V42_02865;Name=E3V42_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_02865;pseudo=true SOQV01000039.1 Protein Homology CDS 8883 8948 . - 0 ID=cds-E3V42_02865;Parent=gene-E3V42_02865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V42_02865;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000039.1 Genbank gene 9091 10350 . + . ID=gene-E3V42_02870;Name=E3V42_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02870 SOQV01000039.1 Protein Homology CDS 9091 10350 . + 0 ID=cds-TMR84713.1;Parent=gene-E3V42_02870;Dbxref=NCBI_GP:TMR84713.1;Name=TMR84713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227095.1;locus_tag=E3V42_02870;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMR84713.1;transl_table=11 SOQV01000039.1 Genbank gene 10366 10917 . + . ID=gene-E3V42_02875;Name=E3V42_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02875 SOQV01000039.1 Protein Homology CDS 10366 10917 . + 0 ID=cds-TMR84714.1;Parent=gene-E3V42_02875;Dbxref=NCBI_GP:TMR84714.1;Name=TMR84714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446267.1;locus_tag=E3V42_02875;product=N-acetyltransferase;protein_id=TMR84714.1;transl_table=11 SOQV01000039.1 Genbank gene 10910 12187 . + . ID=gene-E3V42_02880;Name=E3V42_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02880 SOQV01000039.1 Protein Homology CDS 10910 12187 . + 0 ID=cds-TMR84715.1;Parent=gene-E3V42_02880;Dbxref=NCBI_GP:TMR84715.1;Name=TMR84715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358585.1;locus_tag=E3V42_02880;product=CBS domain-containing protein;protein_id=TMR84715.1;transl_table=11 SOQV01000039.1 Genbank gene 12203 13063 . + . ID=gene-E3V42_02885;Name=E3V42_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02885 SOQV01000039.1 Protein Homology CDS 12203 13063 . + 0 ID=cds-TMR84716.1;Parent=gene-E3V42_02885;Dbxref=NCBI_GP:TMR84716.1;Name=TMR84716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014622584.1;locus_tag=E3V42_02885;product=methionyl aminopeptidase;protein_id=TMR84716.1;transl_table=11 SOQV01000039.1 Genbank gene 13162 13416 . + . ID=gene-E3V42_02890;Name=E3V42_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02890 SOQV01000039.1 Protein Homology CDS 13162 13416 . + 0 ID=cds-TMR84717.1;Parent=gene-E3V42_02890;Dbxref=NCBI_GP:TMR84717.1;Name=TMR84717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212334.1;locus_tag=E3V42_02890;product=DNA repair protein RadC;protein_id=TMR84717.1;transl_table=11 SOQV01000039.1 Genbank gene 13580 15871 . + . ID=gene-E3V42_02895;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=E3V42_02895 SOQV01000039.1 Protein Homology CDS 13580 15871 . + 0 ID=cds-TMR84718.1;Parent=gene-E3V42_02895;Dbxref=NCBI_GP:TMR84718.1;Name=TMR84718.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446302.1;locus_tag=E3V42_02895;product=DNA helicase PcrA;protein_id=TMR84718.1;transl_table=11 SOQV01000039.1 Genbank gene 15914 16594 . + . ID=gene-E3V42_02900;Name=E3V42_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02900 SOQV01000039.1 Protein Homology CDS 15914 16594 . + 0 ID=cds-TMR84719.1;Parent=gene-E3V42_02900;Dbxref=NCBI_GP:TMR84719.1;Name=TMR84719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446301.1;locus_tag=E3V42_02900;product=JAB domain-containing protein;protein_id=TMR84719.1;transl_table=11 SOQV01000039.1 Genbank gene 16591 17280 . - . ID=gene-E3V42_02905;Name=E3V42_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02905 SOQV01000039.1 Protein Homology CDS 16591 17280 . - 0 ID=cds-TMR84720.1;Parent=gene-E3V42_02905;Dbxref=NCBI_GP:TMR84720.1;Name=TMR84720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446300.1;locus_tag=E3V42_02905;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=TMR84720.1;transl_table=11 SOQV01000039.1 Genbank gene 17298 17939 . - . ID=gene-E3V42_02910;Name=E3V42_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02910 SOQV01000039.1 Protein Homology CDS 17298 17939 . - 0 ID=cds-TMR84721.1;Parent=gene-E3V42_02910;Dbxref=NCBI_GP:TMR84721.1;Name=TMR84721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446299.1;locus_tag=E3V42_02910;product=redox-sensing transcriptional repressor Rex;protein_id=TMR84721.1;transl_table=11 SOQV01000039.1 Genbank gene 18022 18273 . - . ID=gene-E3V42_02915;Name=E3V42_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02915 SOQV01000039.1 Protein Homology CDS 18022 18273 . - 0 ID=cds-TMR84722.1;Parent=gene-E3V42_02915;Dbxref=NCBI_GP:TMR84722.1;Name=TMR84722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358593.1;locus_tag=E3V42_02915;product=DUF4649 family protein;protein_id=TMR84722.1;transl_table=11 SOQV01000039.1 Genbank gene 18245 18592 . - . ID=gene-E3V42_02920;Name=E3V42_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02920 SOQV01000039.1 Protein Homology CDS 18245 18592 . - 0 ID=cds-TMR84723.1;Parent=gene-E3V42_02920;Dbxref=NCBI_GP:TMR84723.1;Name=TMR84723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358594.1;locus_tag=E3V42_02920;product=cysteine desulfurase;protein_id=TMR84723.1;transl_table=11 SOQV01000039.1 Genbank gene 18597 19712 . - . ID=gene-E3V42_02925;Name=E3V42_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02925 SOQV01000039.1 Protein Homology CDS 18597 19712 . - 0 ID=cds-TMR84724.1;Parent=gene-E3V42_02925;Dbxref=NCBI_GP:TMR84724.1;Name=TMR84724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358595.1;locus_tag=E3V42_02925;product=cysteine desulfurase;protein_id=TMR84724.1;transl_table=11 SOQV01000039.1 Genbank gene 19722 20681 . - . ID=gene-E3V42_02930;Name=E3V42_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02930 SOQV01000039.1 Protein Homology CDS 19722 20681 . - 0 ID=cds-TMR84725.1;Parent=gene-E3V42_02930;Dbxref=NCBI_GP:TMR84725.1;Name=TMR84725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358596.1;locus_tag=E3V42_02930;product=ribose-phosphate diphosphokinase;protein_id=TMR84725.1;transl_table=11 SOQV01000039.1 Genbank gene 20794 21363 . - . ID=gene-E3V42_02935;Name=E3V42_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02935 SOQV01000039.1 Protein Homology CDS 20794 21363 . - 0 ID=cds-TMR84726.1;Parent=gene-E3V42_02935;Dbxref=NCBI_GP:TMR84726.1;Name=TMR84726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446294.1;locus_tag=E3V42_02935;product=CYTH domain-containing protein;protein_id=TMR84726.1;transl_table=11 SOQV01000039.1 Genbank gene 21497 22642 . - . ID=gene-E3V42_02940;Name=E3V42_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02940 SOQV01000039.1 Protein Homology CDS 21497 22642 . - 0 ID=cds-TMR84727.1;Parent=gene-E3V42_02940;Dbxref=NCBI_GP:TMR84727.1;Name=TMR84727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592975.1;locus_tag=E3V42_02940;product=site-specific integrase;protein_id=TMR84727.1;transl_table=11 SOQV01000039.1 Genbank gene 23170 23958 . - . ID=gene-E3V42_02945;Name=E3V42_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02945 SOQV01000039.1 Protein Homology CDS 23170 23958 . - 0 ID=cds-TMR84728.1;Parent=gene-E3V42_02945;Dbxref=NCBI_GP:TMR84728.1;Name=TMR84728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013669360.1;locus_tag=E3V42_02945;product=DUF1828 domain-containing protein;protein_id=TMR84728.1;transl_table=11 SOQV01000039.1 Genbank gene 23951 24415 . - . ID=gene-E3V42_02950;Name=E3V42_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02950 SOQV01000039.1 GeneMarkS-2+ CDS 23951 24415 . - 0 ID=cds-TMR84729.1;Parent=gene-E3V42_02950;Dbxref=NCBI_GP:TMR84729.1;Name=TMR84729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_02950;product=hypothetical protein;protein_id=TMR84729.1;transl_table=11 SOQV01000039.1 Genbank gene 24423 25229 . - . ID=gene-E3V42_02955;Name=E3V42_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02955 SOQV01000039.1 Protein Homology CDS 24423 25229 . - 0 ID=cds-TMR84730.1;Parent=gene-E3V42_02955;Dbxref=NCBI_GP:TMR84730.1;Name=TMR84730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356925.1;locus_tag=E3V42_02955;product=helix-turn-helix domain-containing protein;protein_id=TMR84730.1;transl_table=11 SOQV01000039.1 Genbank gene 25763 25954 . + . ID=gene-E3V42_02960;Name=E3V42_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02960 SOQV01000039.1 Protein Homology CDS 25763 25954 . + 0 ID=cds-TMR84731.1;Parent=gene-E3V42_02960;Dbxref=NCBI_GP:TMR84731.1;Name=TMR84731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636684.1;locus_tag=E3V42_02960;product=XRE family transcriptional regulator;protein_id=TMR84731.1;transl_table=11 SOQV01000039.1 Genbank gene 26077 26262 . + . ID=gene-E3V42_02965;Name=E3V42_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02965 SOQV01000039.1 Protein Homology CDS 26077 26262 . + 0 ID=cds-TMR84732.1;Parent=gene-E3V42_02965;Dbxref=NCBI_GP:TMR84732.1;Name=TMR84732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274132.1;locus_tag=E3V42_02965;product=XRE family transcriptional regulator;protein_id=TMR84732.1;transl_table=11 SOQV01000039.1 Genbank gene 26274 26471 . + . ID=gene-E3V42_02970;Name=E3V42_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02970 SOQV01000039.1 Protein Homology CDS 26274 26471 . + 0 ID=cds-TMR84733.1;Parent=gene-E3V42_02970;Dbxref=NCBI_GP:TMR84733.1;Name=TMR84733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066214.1;locus_tag=E3V42_02970;product=hypothetical protein;protein_id=TMR84733.1;transl_table=11 SOQV01000039.1 Genbank gene 26481 26672 . + . ID=gene-E3V42_02975;Name=E3V42_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02975 SOQV01000039.1 Protein Homology CDS 26481 26672 . + 0 ID=cds-TMR84734.1;Parent=gene-E3V42_02975;Dbxref=NCBI_GP:TMR84734.1;Name=TMR84734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451679.1;locus_tag=E3V42_02975;product=hypothetical protein;protein_id=TMR84734.1;transl_table=11 SOQV01000039.1 Genbank gene 26871 27401 . - . ID=gene-E3V42_02980;Name=E3V42_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02980 SOQV01000039.1 Protein Homology CDS 26871 27401 . - 0 ID=cds-TMR84735.1;Parent=gene-E3V42_02980;Dbxref=NCBI_GP:TMR84735.1;Name=TMR84735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135684.1;locus_tag=E3V42_02980;product=hypothetical protein;protein_id=TMR84735.1;transl_table=11 SOQV01000039.1 Genbank gene 27657 27917 . + . ID=gene-E3V42_02985;Name=E3V42_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02985 SOQV01000039.1 Protein Homology CDS 27657 27917 . + 0 ID=cds-TMR84736.1;Parent=gene-E3V42_02985;Dbxref=NCBI_GP:TMR84736.1;Name=TMR84736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097022.1;locus_tag=E3V42_02985;product=hypothetical protein;protein_id=TMR84736.1;transl_table=11 SOQV01000039.1 Genbank gene 27965 28678 . + . ID=gene-E3V42_02990;Name=E3V42_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02990 SOQV01000039.1 Protein Homology CDS 27965 28678 . + 0 ID=cds-TMR84737.1;Parent=gene-E3V42_02990;Dbxref=NCBI_GP:TMR84737.1;Name=TMR84737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002355.1;locus_tag=E3V42_02990;product=hypothetical protein;protein_id=TMR84737.1;transl_table=11 ##sequence-region SOQV01000004.1 1 24229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000004.1 Genbank region 1 24229 . + . ID=SOQV01000004.1:1..24229;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000004.1 Genbank gene 1 86 . - . ID=gene-E3V42_00320;Name=E3V42_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00320;partial=true;start_range=.,1 SOQV01000004.1 Protein Homology CDS 1 86 . - 0 ID=cds-TMR85580.1;Parent=gene-E3V42_00320;Dbxref=NCBI_GP:TMR85580.1;Name=TMR85580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_00320;partial=true;product=hypothetical protein;protein_id=TMR85580.1;start_range=.,1;transl_table=11 SOQV01000004.1 Genbank pseudogene 127 387 . - . ID=gene-E3V42_00325;Name=E3V42_00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00325;pseudo=true SOQV01000004.1 Protein Homology CDS 127 387 . - 0 ID=cds-E3V42_00325;Parent=gene-E3V42_00325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445640.1;locus_tag=E3V42_00325;product=PaaI family thioesterase;pseudo=true;transl_table=11 SOQV01000004.1 Genbank gene 457 1938 . - . ID=gene-E3V42_00330;Name=E3V42_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00330 SOQV01000004.1 Protein Homology CDS 457 1938 . - 0 ID=cds-TMR85552.1;Parent=gene-E3V42_00330;Dbxref=NCBI_GP:TMR85552.1;Name=TMR85552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359259.1;locus_tag=E3V42_00330;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=TMR85552.1;transl_table=11 SOQV01000004.1 Genbank pseudogene 1957 3033 . - . ID=gene-E3V42_00335;Name=E3V42_00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00335;pseudo=true SOQV01000004.1 Protein Homology CDS 1957 3033 . - 0 ID=cds-E3V42_00335;Parent=gene-E3V42_00335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359260.1;locus_tag=E3V42_00335;product=galactokinase;pseudo=true;transl_table=11 SOQV01000004.1 Genbank gene 3138 4145 . + . ID=gene-E3V42_00340;Name=E3V42_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00340 SOQV01000004.1 Protein Homology CDS 3138 4145 . + 0 ID=cds-TMR85553.1;Parent=gene-E3V42_00340;Dbxref=NCBI_GP:TMR85553.1;Name=TMR85553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359261.1;locus_tag=E3V42_00340;product=LacI family DNA-binding transcriptional regulator;protein_id=TMR85553.1;transl_table=11 SOQV01000004.1 Genbank gene 4191 5228 . - . ID=gene-E3V42_00345;Name=E3V42_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00345 SOQV01000004.1 Protein Homology CDS 4191 5228 . - 0 ID=cds-TMR85554.1;Parent=gene-E3V42_00345;Dbxref=NCBI_GP:TMR85554.1;Name=TMR85554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359262.1;locus_tag=E3V42_00345;product=Zn-dependent alcohol dehydrogenase;protein_id=TMR85554.1;transl_table=11 SOQV01000004.1 Genbank gene 5229 5582 . - . ID=gene-E3V42_00350;Name=E3V42_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00350 SOQV01000004.1 Protein Homology CDS 5229 5582 . - 0 ID=cds-TMR85555.1;Parent=gene-E3V42_00350;Dbxref=NCBI_GP:TMR85555.1;Name=TMR85555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359263.1;locus_tag=E3V42_00350;product=MerR family transcriptional regulator;protein_id=TMR85555.1;transl_table=11 SOQV01000004.1 Genbank gene 5826 6692 . - . ID=gene-E3V42_00355;Name=E3V42_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00355 SOQV01000004.1 Protein Homology CDS 5826 6692 . - 0 ID=cds-TMR85556.1;Parent=gene-E3V42_00355;Dbxref=NCBI_GP:TMR85556.1;Name=TMR85556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829479.1;locus_tag=E3V42_00355;product=cation transporter;protein_id=TMR85556.1;transl_table=11 SOQV01000004.1 Genbank gene 6849 7385 . + . ID=gene-E3V42_00360;Name=E3V42_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00360 SOQV01000004.1 Protein Homology CDS 6849 7385 . + 0 ID=cds-TMR85557.1;Parent=gene-E3V42_00360;Dbxref=NCBI_GP:TMR85557.1;Name=TMR85557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359265.1;locus_tag=E3V42_00360;product=TetR/AcrR family transcriptional regulator;protein_id=TMR85557.1;transl_table=11 SOQV01000004.1 Genbank gene 7551 8360 . - . ID=gene-E3V42_00365;Name=E3V42_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00365 SOQV01000004.1 Protein Homology CDS 7551 8360 . - 0 ID=cds-TMR85558.1;Parent=gene-E3V42_00365;Dbxref=NCBI_GP:TMR85558.1;Name=TMR85558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359266.1;locus_tag=E3V42_00365;product=nicotinamide riboside transporter PnuC;protein_id=TMR85558.1;transl_table=11 SOQV01000004.1 Genbank gene 8702 10222 . - . ID=gene-E3V42_00370;Name=E3V42_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00370 SOQV01000004.1 Protein Homology CDS 8702 10222 . - 0 ID=cds-TMR85559.1;Parent=gene-E3V42_00370;Dbxref=NCBI_GP:TMR85559.1;Name=TMR85559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359269.1;locus_tag=E3V42_00370;product=ABC transporter permease/substrate-binding protein;protein_id=TMR85559.1;transl_table=11 SOQV01000004.1 Genbank gene 10215 10943 . - . ID=gene-E3V42_00375;Name=E3V42_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00375 SOQV01000004.1 Protein Homology CDS 10215 10943 . - 0 ID=cds-TMR85560.1;Parent=gene-E3V42_00375;Dbxref=NCBI_GP:TMR85560.1;Name=TMR85560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359270.1;locus_tag=E3V42_00375;product=ABC transporter ATP-binding protein;protein_id=TMR85560.1;transl_table=11 SOQV01000004.1 Genbank gene 10958 11107 . - . ID=gene-E3V42_00380;Name=E3V42_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00380 SOQV01000004.1 Protein Homology CDS 10958 11107 . - 0 ID=cds-TMR85561.1;Parent=gene-E3V42_00380;Dbxref=NCBI_GP:TMR85561.1;Name=TMR85561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262150.1;locus_tag=E3V42_00380;product=polyketide cyclase;protein_id=TMR85561.1;transl_table=11 SOQV01000004.1 Genbank gene 11184 11627 . - . ID=gene-E3V42_00385;Name=E3V42_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00385 SOQV01000004.1 Protein Homology CDS 11184 11627 . - 0 ID=cds-TMR85562.1;Parent=gene-E3V42_00385;Dbxref=NCBI_GP:TMR85562.1;Name=TMR85562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445632.1;locus_tag=E3V42_00385;product=MarR family transcriptional regulator;protein_id=TMR85562.1;transl_table=11 SOQV01000004.1 Genbank gene 12204 12500 . - . ID=gene-E3V42_00390;Name=E3V42_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00390 SOQV01000004.1 Protein Homology CDS 12204 12500 . - 0 ID=cds-TMR85563.1;Parent=gene-E3V42_00390;Dbxref=NCBI_GP:TMR85563.1;Name=TMR85563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445482.1;locus_tag=E3V42_00390;product=bacteriocin immunity protein;protein_id=TMR85563.1;transl_table=11 SOQV01000004.1 Genbank gene 12520 13584 . - . ID=gene-E3V42_00395;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=E3V42_00395 SOQV01000004.1 Protein Homology CDS 12520 13584 . - 0 ID=cds-TMR85564.1;Parent=gene-E3V42_00395;Dbxref=NCBI_GP:TMR85564.1;Name=TMR85564.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359274.1;locus_tag=E3V42_00395;product=glutamyl aminopeptidase;protein_id=TMR85564.1;transl_table=11 SOQV01000004.1 Genbank gene 13807 14781 . + . ID=gene-E3V42_00400;Name=E3V42_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00400 SOQV01000004.1 Protein Homology CDS 13807 14781 . + 0 ID=cds-TMR85565.1;Parent=gene-E3V42_00400;Dbxref=NCBI_GP:TMR85565.1;Name=TMR85565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013875.1;locus_tag=E3V42_00400;product=ABC transporter permease;protein_id=TMR85565.1;transl_table=11 SOQV01000004.1 Genbank gene 14771 15727 . + . ID=gene-E3V42_00405;Name=E3V42_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00405 SOQV01000004.1 Protein Homology CDS 14771 15727 . + 0 ID=cds-TMR85566.1;Parent=gene-E3V42_00405;Dbxref=NCBI_GP:TMR85566.1;Name=TMR85566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359277.1;locus_tag=E3V42_00405;product=ferrichrome ABC transporter permease;protein_id=TMR85566.1;transl_table=11 SOQV01000004.1 Genbank gene 15724 16476 . + . ID=gene-E3V42_00410;Name=E3V42_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00410 SOQV01000004.1 Protein Homology CDS 15724 16476 . + 0 ID=cds-TMR85567.1;Parent=gene-E3V42_00410;Dbxref=NCBI_GP:TMR85567.1;Name=TMR85567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359278.1;locus_tag=E3V42_00410;product=ATP-binding cassette domain-containing protein;protein_id=TMR85567.1;transl_table=11 SOQV01000004.1 Genbank gene 16572 17543 . + . ID=gene-E3V42_00415;Name=E3V42_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00415 SOQV01000004.1 Protein Homology CDS 16572 17543 . + 0 ID=cds-TMR85568.1;Parent=gene-E3V42_00415;Dbxref=NCBI_GP:TMR85568.1;Name=TMR85568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359279.1;locus_tag=E3V42_00415;product=siderophore ABC transporter substrate-binding protein;protein_id=TMR85568.1;transl_table=11 SOQV01000004.1 Genbank gene 17768 18010 . - . ID=gene-E3V42_00420;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=E3V42_00420 SOQV01000004.1 Protein Homology CDS 17768 18010 . - 0 ID=cds-TMR85569.1;Parent=gene-E3V42_00420;Dbxref=NCBI_GP:TMR85569.1;Name=TMR85569.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359280.1;locus_tag=E3V42_00420;product=membrane protein insertion efficiency factor YidD;protein_id=TMR85569.1;transl_table=11 SOQV01000004.1 Genbank gene 18010 18732 . - . ID=gene-E3V42_00425;Name=E3V42_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00425 SOQV01000004.1 Protein Homology CDS 18010 18732 . - 0 ID=cds-TMR85570.1;Parent=gene-E3V42_00425;Dbxref=NCBI_GP:TMR85570.1;Name=TMR85570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359281.1;locus_tag=E3V42_00425;product=rRNA pseudouridine synthase;protein_id=TMR85570.1;transl_table=11 SOQV01000004.1 Genbank gene 18719 19288 . - . ID=gene-E3V42_00430;Name=E3V42_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00430 SOQV01000004.1 Protein Homology CDS 18719 19288 . - 0 ID=cds-TMR85571.1;Parent=gene-E3V42_00430;Dbxref=NCBI_GP:TMR85571.1;Name=TMR85571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359282.1;locus_tag=E3V42_00430;product=segregation/condensation protein B;protein_id=TMR85571.1;transl_table=11 SOQV01000004.1 Genbank gene 19307 20035 . - . ID=gene-E3V42_00435;Name=E3V42_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00435 SOQV01000004.1 Protein Homology CDS 19307 20035 . - 0 ID=cds-TMR85572.1;Parent=gene-E3V42_00435;Dbxref=NCBI_GP:TMR85572.1;Name=TMR85572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359283.1;locus_tag=E3V42_00435;product=segregation/condensation protein A;protein_id=TMR85572.1;transl_table=11 SOQV01000004.1 Genbank gene 20035 20775 . - . ID=gene-E3V42_00440;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=E3V42_00440 SOQV01000004.1 Protein Homology CDS 20035 20775 . - 0 ID=cds-TMR85573.1;Parent=gene-E3V42_00440;Dbxref=NCBI_GP:TMR85573.1;Name=TMR85573.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359284.1;locus_tag=E3V42_00440;product=site-specific tyrosine recombinase XerD;protein_id=TMR85573.1;transl_table=11 SOQV01000004.1 Genbank gene 20766 21227 . - . ID=gene-E3V42_00445;Name=E3V42_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00445 SOQV01000004.1 Protein Homology CDS 20766 21227 . - 0 ID=cds-TMR85574.1;Parent=gene-E3V42_00445;Dbxref=NCBI_GP:TMR85574.1;Name=TMR85574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359285.1;locus_tag=E3V42_00445;product=CBS domain-containing protein;protein_id=TMR85574.1;transl_table=11 SOQV01000004.1 Genbank gene 21224 21745 . - . ID=gene-E3V42_00450;Name=E3V42_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00450 SOQV01000004.1 Protein Homology CDS 21224 21745 . - 0 ID=cds-TMR85575.1;Parent=gene-E3V42_00450;Dbxref=NCBI_GP:TMR85575.1;Name=TMR85575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359286.1;locus_tag=E3V42_00450;product=metallophosphoesterase;protein_id=TMR85575.1;transl_table=11 SOQV01000004.1 Genbank gene 21721 22692 . - . ID=gene-E3V42_00455;Name=E3V42_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00455 SOQV01000004.1 Protein Homology CDS 21721 22692 . - 0 ID=cds-TMR85576.1;Parent=gene-E3V42_00455;Dbxref=NCBI_GP:TMR85576.1;Name=TMR85576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445472.1;locus_tag=E3V42_00455;product=nucleoside-triphosphate diphosphatase;protein_id=TMR85576.1;transl_table=11 SOQV01000004.1 Genbank gene 22689 23483 . - . ID=gene-E3V42_00460;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=E3V42_00460 SOQV01000004.1 Protein Homology CDS 22689 23483 . - 0 ID=cds-TMR85577.1;Parent=gene-E3V42_00460;Dbxref=NCBI_GP:TMR85577.1;Name=TMR85577.1;gbkey=CDS;gene=racE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359288.1;locus_tag=E3V42_00460;product=glutamate racemase;protein_id=TMR85577.1;transl_table=11 SOQV01000004.1 Genbank gene 23687 23935 . - . ID=gene-E3V42_00465;Name=E3V42_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00465 SOQV01000004.1 Protein Homology CDS 23687 23935 . - 0 ID=cds-TMR85578.1;Parent=gene-E3V42_00465;Dbxref=NCBI_GP:TMR85578.1;Name=TMR85578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445470.1;locus_tag=E3V42_00465;product=YneF family protein;protein_id=TMR85578.1;transl_table=11 SOQV01000004.1 Genbank gene 24094 24229 . + . ID=gene-E3V42_00470;Name=E3V42_00470;end_range=24229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00470;partial=true SOQV01000004.1 Protein Homology CDS 24094 24229 . + 0 ID=cds-TMR85579.1;Parent=gene-E3V42_00470;Dbxref=NCBI_GP:TMR85579.1;Name=TMR85579.1;end_range=24229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=E3V42_00470;partial=true;product=ISNCY family transposase;protein_id=TMR85579.1;transl_table=11 ##sequence-region SOQV01000040.1 1 174419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000040.1 Genbank region 1 174419 . + . ID=SOQV01000040.1:1..174419;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000040.1 Genbank gene 25 183 . + . ID=gene-E3V42_02995;Name=E3V42_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_02995 SOQV01000040.1 Protein Homology CDS 25 183 . + 0 ID=cds-TMR84642.1;Parent=gene-E3V42_02995;Dbxref=NCBI_GP:TMR84642.1;Name=TMR84642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V42_02995;product=transposase domain-containing protein;protein_id=TMR84642.1;transl_table=11 SOQV01000040.1 Genbank gene 550 1479 . + . ID=gene-E3V42_03000;Name=E3V42_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03000 SOQV01000040.1 Protein Homology CDS 550 1479 . + 0 ID=cds-TMR84468.1;Parent=gene-E3V42_03000;Dbxref=NCBI_GP:TMR84468.1;Name=TMR84468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447091.1;locus_tag=E3V42_03000;product=sugar ABC transporter permease;protein_id=TMR84468.1;transl_table=11 SOQV01000040.1 Genbank gene 1493 2416 . + . ID=gene-E3V42_03005;Name=E3V42_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03005 SOQV01000040.1 Protein Homology CDS 1493 2416 . + 0 ID=cds-TMR84469.1;Parent=gene-E3V42_03005;Dbxref=NCBI_GP:TMR84469.1;Name=TMR84469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357676.1;locus_tag=E3V42_03005;product=carbohydrate ABC transporter permease;protein_id=TMR84469.1;transl_table=11 SOQV01000040.1 Genbank gene 2520 3995 . + . ID=gene-E3V42_03010;Name=E3V42_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03010 SOQV01000040.1 Protein Homology CDS 2520 3995 . + 0 ID=cds-TMR84470.1;Parent=gene-E3V42_03010;Dbxref=NCBI_GP:TMR84470.1;Name=TMR84470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447089.1;locus_tag=E3V42_03010;product=DUF3502 domain-containing protein;protein_id=TMR84470.1;transl_table=11 SOQV01000040.1 Genbank gene 4263 4469 . + . ID=gene-E3V42_03015;Name=E3V42_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03015 SOQV01000040.1 Protein Homology CDS 4263 4469 . + 0 ID=cds-TMR84471.1;Parent=gene-E3V42_03015;Dbxref=NCBI_GP:TMR84471.1;Name=TMR84471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809283.1;locus_tag=E3V42_03015;product=hypothetical protein;protein_id=TMR84471.1;transl_table=11 SOQV01000040.1 Genbank gene 4420 5406 . + . ID=gene-E3V42_03020;Name=E3V42_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03020 SOQV01000040.1 Protein Homology CDS 4420 5406 . + 0 ID=cds-TMR84472.1;Parent=gene-E3V42_03020;Dbxref=NCBI_GP:TMR84472.1;Name=TMR84472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357678.1;locus_tag=E3V42_03020;product=rhodanese-related sulfurtransferase;protein_id=TMR84472.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 5472 5658 . + . ID=gene-E3V42_03025;Name=E3V42_03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03025;pseudo=true SOQV01000040.1 Protein Homology CDS 5472 5658 . + 0 ID=cds-E3V42_03025;Parent=gene-E3V42_03025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V42_03025;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 5681 6541 . + . ID=gene-E3V42_03030;Name=E3V42_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03030 SOQV01000040.1 Protein Homology CDS 5681 6541 . + 0 ID=cds-TMR84473.1;Parent=gene-E3V42_03030;Dbxref=NCBI_GP:TMR84473.1;Name=TMR84473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447085.1;locus_tag=E3V42_03030;product=DUF4299 family protein;protein_id=TMR84473.1;transl_table=11 SOQV01000040.1 Genbank gene 6765 7829 . - . ID=gene-E3V42_03035;Name=E3V42_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03035 SOQV01000040.1 Protein Homology CDS 6765 7829 . - 0 ID=cds-TMR84474.1;Parent=gene-E3V42_03035;Dbxref=NCBI_GP:TMR84474.1;Name=TMR84474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357680.1;locus_tag=E3V42_03035;product=hypothetical protein;protein_id=TMR84474.1;transl_table=11 SOQV01000040.1 Genbank gene 7891 8805 . - . ID=gene-E3V42_03040;Name=E3V42_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03040 SOQV01000040.1 Protein Homology CDS 7891 8805 . - 0 ID=cds-TMR84475.1;Parent=gene-E3V42_03040;Dbxref=NCBI_GP:TMR84475.1;Name=TMR84475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233690.1;locus_tag=E3V42_03040;product=hypothetical protein;protein_id=TMR84475.1;transl_table=11 SOQV01000040.1 Genbank gene 8798 9391 . - . ID=gene-E3V42_03045;Name=E3V42_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03045 SOQV01000040.1 Protein Homology CDS 8798 9391 . - 0 ID=cds-TMR84476.1;Parent=gene-E3V42_03045;Dbxref=NCBI_GP:TMR84476.1;Name=TMR84476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447082.1;locus_tag=E3V42_03045;product=DUF1700 domain-containing protein;protein_id=TMR84476.1;transl_table=11 SOQV01000040.1 Genbank gene 9378 9704 . - . ID=gene-E3V42_03050;Name=E3V42_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03050 SOQV01000040.1 Protein Homology CDS 9378 9704 . - 0 ID=cds-TMR84477.1;Parent=gene-E3V42_03050;Dbxref=NCBI_GP:TMR84477.1;Name=TMR84477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357683.1;locus_tag=E3V42_03050;product=PadR family transcriptional regulator;protein_id=TMR84477.1;transl_table=11 SOQV01000040.1 Genbank gene 9843 11009 . - . ID=gene-E3V42_03055;Name=E3V42_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03055 SOQV01000040.1 Protein Homology CDS 9843 11009 . - 0 ID=cds-TMR84478.1;Parent=gene-E3V42_03055;Dbxref=NCBI_GP:TMR84478.1;Name=TMR84478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447080.1;locus_tag=E3V42_03055;product=MFS transporter;protein_id=TMR84478.1;transl_table=11 SOQV01000040.1 Genbank gene 11067 12197 . + . ID=gene-E3V42_03060;Name=E3V42_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03060 SOQV01000040.1 Protein Homology CDS 11067 12197 . + 0 ID=cds-TMR84479.1;Parent=gene-E3V42_03060;Dbxref=NCBI_GP:TMR84479.1;Name=TMR84479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096213.1;locus_tag=E3V42_03060;product=glycosyltransferase family 2 protein;protein_id=TMR84479.1;transl_table=11 SOQV01000040.1 Genbank gene 12265 14115 . + . ID=gene-E3V42_03065;Name=E3V42_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03065 SOQV01000040.1 Protein Homology CDS 12265 14115 . + 0 ID=cds-TMR84480.1;Parent=gene-E3V42_03065;Dbxref=NCBI_GP:TMR84480.1;Name=TMR84480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357686.1;locus_tag=E3V42_03065;product=polysaccharide biosynthesis protein;protein_id=TMR84480.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 14476 14550 . - . ID=gene-E3V42_03070;Name=E3V42_03070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03070;pseudo=true SOQV01000040.1 Protein Homology CDS 14476 14550 . - 0 ID=cds-E3V42_03070;Parent=gene-E3V42_03070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_03070;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 14600 15232 . - . ID=gene-E3V42_03075;Name=E3V42_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03075 SOQV01000040.1 Protein Homology CDS 14600 15232 . - 0 ID=cds-TMR84481.1;Parent=gene-E3V42_03075;Dbxref=NCBI_GP:TMR84481.1;Name=TMR84481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357687.1;locus_tag=E3V42_03075;product=HAD family hydrolase;protein_id=TMR84481.1;transl_table=11 SOQV01000040.1 Genbank gene 15254 16126 . - . ID=gene-E3V42_03080;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=E3V42_03080 SOQV01000040.1 Protein Homology CDS 15254 16126 . - 0 ID=cds-TMR84482.1;Parent=gene-E3V42_03080;Dbxref=NCBI_GP:TMR84482.1;Name=TMR84482.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357688.1;locus_tag=E3V42_03080;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=TMR84482.1;transl_table=11 SOQV01000040.1 Genbank gene 16135 16806 . - . ID=gene-E3V42_03085;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=E3V42_03085 SOQV01000040.1 Protein Homology CDS 16135 16806 . - 0 ID=cds-TMR84483.1;Parent=gene-E3V42_03085;Dbxref=NCBI_GP:TMR84483.1;Name=TMR84483.1;gbkey=CDS;gene=sdaAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357689.1;locus_tag=E3V42_03085;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit beta;protein_id=TMR84483.1;transl_table=11 SOQV01000040.1 Genbank gene 17048 17671 . + . ID=gene-E3V42_03090;Name=E3V42_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03090 SOQV01000040.1 Protein Homology CDS 17048 17671 . + 0 ID=cds-TMR84484.1;Parent=gene-E3V42_03090;Dbxref=NCBI_GP:TMR84484.1;Name=TMR84484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357690.1;locus_tag=E3V42_03090;product=LysM domain-containing protein;protein_id=TMR84484.1;transl_table=11 SOQV01000040.1 Genbank gene 17723 18586 . - . ID=gene-E3V42_03095;Name=E3V42_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03095 SOQV01000040.1 Protein Homology CDS 17723 18586 . - 0 ID=cds-TMR84485.1;Parent=gene-E3V42_03095;Dbxref=NCBI_GP:TMR84485.1;Name=TMR84485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447073.1;locus_tag=E3V42_03095;product=XRE family transcriptional regulator;protein_id=TMR84485.1;transl_table=11 SOQV01000040.1 Genbank gene 18767 19612 . + . ID=gene-E3V42_03100;Name=E3V42_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03100 SOQV01000040.1 Protein Homology CDS 18767 19612 . + 0 ID=cds-TMR84486.1;Parent=gene-E3V42_03100;Dbxref=NCBI_GP:TMR84486.1;Name=TMR84486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452046.1;locus_tag=E3V42_03100;product=ABC transporter ATP-binding protein;protein_id=TMR84486.1;transl_table=11 SOQV01000040.1 Genbank gene 19628 20356 . + . ID=gene-E3V42_03105;Name=E3V42_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03105 SOQV01000040.1 Protein Homology CDS 19628 20356 . + 0 ID=cds-TMR84487.1;Parent=gene-E3V42_03105;Dbxref=NCBI_GP:TMR84487.1;Name=TMR84487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358873.1;locus_tag=E3V42_03105;product=ABC transporter permease;protein_id=TMR84487.1;transl_table=11 SOQV01000040.1 Genbank gene 20860 21447 . + . ID=gene-E3V42_03110;Name=E3V42_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03110 SOQV01000040.1 Protein Homology CDS 20860 21447 . + 0 ID=cds-TMR84488.1;Parent=gene-E3V42_03110;Dbxref=NCBI_GP:TMR84488.1;Name=TMR84488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447068.1;locus_tag=E3V42_03110;product=hypothetical protein;protein_id=TMR84488.1;transl_table=11 SOQV01000040.1 Genbank gene 21739 23847 . + . ID=gene-E3V42_03115;Name=E3V42_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03115 SOQV01000040.1 Protein Homology CDS 21739 23847 . + 0 ID=cds-TMR84489.1;Parent=gene-E3V42_03115;Dbxref=NCBI_GP:TMR84489.1;Name=TMR84489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447067.1;locus_tag=E3V42_03115;product=bacteriocin-associated integral membrane family protein;protein_id=TMR84489.1;transl_table=11 SOQV01000040.1 Genbank gene 23844 24485 . + . ID=gene-E3V42_03120;Name=E3V42_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03120 SOQV01000040.1 Protein Homology CDS 23844 24485 . + 0 ID=cds-TMR84490.1;Parent=gene-E3V42_03120;Dbxref=NCBI_GP:TMR84490.1;Name=TMR84490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447066.1;locus_tag=E3V42_03120;product=ABC transporter ATP-binding protein;protein_id=TMR84490.1;transl_table=11 SOQV01000040.1 Genbank gene 24692 25498 . + . ID=gene-E3V42_03125;Name=E3V42_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03125 SOQV01000040.1 Protein Homology CDS 24692 25498 . + 0 ID=cds-TMR84491.1;Parent=gene-E3V42_03125;Dbxref=NCBI_GP:TMR84491.1;Name=TMR84491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447065.1;locus_tag=E3V42_03125;product=transporter substrate-binding domain-containing protein;protein_id=TMR84491.1;transl_table=11 SOQV01000040.1 Genbank gene 25515 26711 . + . ID=gene-E3V42_03130;Name=E3V42_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03130 SOQV01000040.1 Protein Homology CDS 25515 26711 . + 0 ID=cds-TMR84492.1;Parent=gene-E3V42_03130;Dbxref=NCBI_GP:TMR84492.1;Name=TMR84492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447064.1;locus_tag=E3V42_03130;product=argininosuccinate synthase;protein_id=TMR84492.1;transl_table=11 SOQV01000040.1 Genbank gene 26740 28131 . + . ID=gene-E3V42_03135;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=E3V42_03135 SOQV01000040.1 Protein Homology CDS 26740 28131 . + 0 ID=cds-TMR84493.1;Parent=gene-E3V42_03135;Dbxref=NCBI_GP:TMR84493.1;Name=TMR84493.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357697.1;locus_tag=E3V42_03135;product=argininosuccinate lyase;protein_id=TMR84493.1;transl_table=11 SOQV01000040.1 Genbank gene 28419 29282 . - . ID=gene-E3V42_03140;Name=E3V42_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03140 SOQV01000040.1 Protein Homology CDS 28419 29282 . - 0 ID=cds-TMR84494.1;Parent=gene-E3V42_03140;Dbxref=NCBI_GP:TMR84494.1;Name=TMR84494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447073.1;locus_tag=E3V42_03140;product=XRE family transcriptional regulator;protein_id=TMR84494.1;transl_table=11 SOQV01000040.1 Genbank gene 29748 31967 . + . ID=gene-E3V42_03145;Name=E3V42_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03145 SOQV01000040.1 Protein Homology CDS 29748 31967 . + 0 ID=cds-TMR84643.1;Parent=gene-E3V42_03145;Dbxref=NCBI_GP:TMR84643.1;Name=TMR84643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856353.1;locus_tag=E3V42_03145;product=peptidase domain-containing ABC transporter;protein_id=TMR84643.1;transl_table=11 SOQV01000040.1 Genbank gene 31960 32427 . + . ID=gene-E3V42_03150;Name=E3V42_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03150 SOQV01000040.1 Protein Homology CDS 31960 32427 . + 0 ID=cds-TMR84495.1;Parent=gene-E3V42_03150;Dbxref=NCBI_GP:TMR84495.1;Name=TMR84495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357701.1;locus_tag=E3V42_03150;product=AraC family transcriptional regulator;protein_id=TMR84495.1;transl_table=11 SOQV01000040.1 Genbank gene 32424 33776 . + . ID=gene-E3V42_03155;Name=E3V42_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03155 SOQV01000040.1 Protein Homology CDS 32424 33776 . + 0 ID=cds-TMR84496.1;Parent=gene-E3V42_03155;Dbxref=NCBI_GP:TMR84496.1;Name=TMR84496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357702.1;locus_tag=E3V42_03155;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=TMR84496.1;transl_table=11 SOQV01000040.1 Genbank gene 33921 34223 . + . ID=gene-E3V42_03160;Name=E3V42_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03160 SOQV01000040.1 Protein Homology CDS 33921 34223 . + 0 ID=cds-TMR84497.1;Parent=gene-E3V42_03160;Dbxref=NCBI_GP:TMR84497.1;Name=TMR84497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424403.1;locus_tag=E3V42_03160;product=hypothetical protein;protein_id=TMR84497.1;transl_table=11 SOQV01000040.1 Genbank gene 34226 34417 . + . ID=gene-E3V42_03165;Name=E3V42_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03165 SOQV01000040.1 Protein Homology CDS 34226 34417 . + 0 ID=cds-TMR84498.1;Parent=gene-E3V42_03165;Dbxref=NCBI_GP:TMR84498.1;Name=TMR84498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653343.1;locus_tag=E3V42_03165;product=hypothetical protein;protein_id=TMR84498.1;transl_table=11 SOQV01000040.1 Genbank gene 34925 36046 . + . ID=gene-E3V42_03170;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=E3V42_03170 SOQV01000040.1 Protein Homology CDS 34925 36046 . + 0 ID=cds-TMR84499.1;Parent=gene-E3V42_03170;Dbxref=NCBI_GP:TMR84499.1;Name=TMR84499.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447059.1;locus_tag=E3V42_03170;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=TMR84499.1;transl_table=11 SOQV01000040.1 Genbank gene 36160 36642 . + . ID=gene-E3V42_03175;Name=E3V42_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03175 SOQV01000040.1 Protein Homology CDS 36160 36642 . + 0 ID=cds-TMR84500.1;Parent=gene-E3V42_03175;Dbxref=NCBI_GP:TMR84500.1;Name=TMR84500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357717.1;locus_tag=E3V42_03175;product=NUDIX domain-containing protein;protein_id=TMR84500.1;transl_table=11 SOQV01000040.1 Genbank gene 36652 38565 . + . ID=gene-E3V42_03180;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=E3V42_03180 SOQV01000040.1 Protein Homology CDS 36652 38565 . + 0 ID=cds-TMR84501.1;Parent=gene-E3V42_03180;Dbxref=NCBI_GP:TMR84501.1;Name=TMR84501.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447057.1;locus_tag=E3V42_03180;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=TMR84501.1;transl_table=11 SOQV01000040.1 Genbank gene 38766 40445 . - . ID=gene-E3V42_03185;Name=E3V42_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03185 SOQV01000040.1 Protein Homology CDS 38766 40445 . - 0 ID=cds-TMR84502.1;Parent=gene-E3V42_03185;Dbxref=NCBI_GP:TMR84502.1;Name=TMR84502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447056.1;locus_tag=E3V42_03185;product=ribonuclease J;protein_id=TMR84502.1;transl_table=11 SOQV01000040.1 Genbank gene 40447 40680 . - . ID=gene-E3V42_03190;Name=E3V42_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03190 SOQV01000040.1 Protein Homology CDS 40447 40680 . - 0 ID=cds-TMR84503.1;Parent=gene-E3V42_03190;Dbxref=NCBI_GP:TMR84503.1;Name=TMR84503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357720.1;locus_tag=E3V42_03190;product=DUF1447 family protein;protein_id=TMR84503.1;transl_table=11 SOQV01000040.1 Genbank gene 40865 41098 . + . ID=gene-E3V42_03195;Name=E3V42_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03195 SOQV01000040.1 GeneMarkS-2+ CDS 40865 41098 . + 0 ID=cds-TMR84504.1;Parent=gene-E3V42_03195;Dbxref=NCBI_GP:TMR84504.1;Name=TMR84504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_03195;product=hypothetical protein;protein_id=TMR84504.1;transl_table=11 SOQV01000040.1 Genbank gene 41201 41416 . + . ID=gene-E3V42_03200;Name=E3V42_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03200 SOQV01000040.1 Protein Homology CDS 41201 41416 . + 0 ID=cds-TMR84644.1;Parent=gene-E3V42_03200;Dbxref=NCBI_GP:TMR84644.1;Name=TMR84644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527686.1;locus_tag=E3V42_03200;product=hypothetical protein;protein_id=TMR84644.1;transl_table=11 SOQV01000040.1 Genbank gene 41650 41865 . + . ID=gene-E3V42_03205;Name=E3V42_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03205 SOQV01000040.1 Protein Homology CDS 41650 41865 . + 0 ID=cds-TMR84505.1;Parent=gene-E3V42_03205;Dbxref=NCBI_GP:TMR84505.1;Name=TMR84505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447054.1;locus_tag=E3V42_03205;product=hypothetical protein;protein_id=TMR84505.1;transl_table=11 SOQV01000040.1 Genbank gene 41862 41978 . - . ID=gene-E3V42_03210;Name=E3V42_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03210 SOQV01000040.1 Protein Homology CDS 41862 41978 . - 0 ID=cds-TMR84645.1;Parent=gene-E3V42_03210;Dbxref=NCBI_GP:TMR84645.1;Name=TMR84645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823330.1;locus_tag=E3V42_03210;product=competence protein;protein_id=TMR84645.1;transl_table=11 SOQV01000040.1 Genbank gene 41997 42194 . - . ID=gene-E3V42_03215;Name=E3V42_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03215 SOQV01000040.1 Protein Homology CDS 41997 42194 . - 0 ID=cds-TMR84506.1;Parent=gene-E3V42_03215;Dbxref=NCBI_GP:TMR84506.1;Name=TMR84506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315026.1;locus_tag=E3V42_03215;product=hypothetical protein;protein_id=TMR84506.1;transl_table=11 SOQV01000040.1 Genbank gene 42188 42340 . - . ID=gene-E3V42_03220;Name=cibB;gbkey=Gene;gene=cibB;gene_biotype=protein_coding;locus_tag=E3V42_03220 SOQV01000040.1 Protein Homology CDS 42188 42340 . - 0 ID=cds-TMR84507.1;Parent=gene-E3V42_03220;Dbxref=NCBI_GP:TMR84507.1;Name=TMR84507.1;gbkey=CDS;gene=cibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357721.1;locus_tag=E3V42_03220;product=fratricide two-peptide bacteriocin subunit CibB;protein_id=TMR84507.1;transl_table=11 SOQV01000040.1 Genbank gene 42342 42527 . - . ID=gene-E3V42_03225;Name=cibA;gbkey=Gene;gene=cibA;gene_biotype=protein_coding;locus_tag=E3V42_03225 SOQV01000040.1 Protein Homology CDS 42342 42527 . - 0 ID=cds-TMR84508.1;Parent=gene-E3V42_03225;Dbxref=NCBI_GP:TMR84508.1;Name=TMR84508.1;gbkey=CDS;gene=cibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357722.1;locus_tag=E3V42_03225;product=fratricide two-peptide bacteriocin subunit CibA;protein_id=TMR84508.1;transl_table=11 SOQV01000040.1 Genbank gene 42705 43388 . + . ID=gene-E3V42_03230;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=E3V42_03230 SOQV01000040.1 Protein Homology CDS 42705 43388 . + 0 ID=cds-TMR84509.1;Parent=gene-E3V42_03230;Dbxref=NCBI_GP:TMR84509.1;Name=TMR84509.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447049.1;locus_tag=E3V42_03230;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=TMR84509.1;transl_table=11 SOQV01000040.1 Genbank gene 43385 43822 . + . ID=gene-E3V42_03235;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=E3V42_03235 SOQV01000040.1 Protein Homology CDS 43385 43822 . + 0 ID=cds-TMR84510.1;Parent=gene-E3V42_03235;Dbxref=NCBI_GP:TMR84510.1;Name=TMR84510.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357724.1;locus_tag=E3V42_03235;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=TMR84510.1;transl_table=11 SOQV01000040.1 Genbank gene 43812 44822 . + . ID=gene-E3V42_03240;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=E3V42_03240 SOQV01000040.1 Protein Homology CDS 43812 44822 . + 0 ID=cds-TMR84511.1;Parent=gene-E3V42_03240;Dbxref=NCBI_GP:TMR84511.1;Name=TMR84511.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357725.1;locus_tag=E3V42_03240;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=TMR84511.1;transl_table=11 SOQV01000040.1 Genbank gene 44926 45741 . + . ID=gene-E3V42_03245;Name=E3V42_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03245 SOQV01000040.1 Protein Homology CDS 44926 45741 . + 0 ID=cds-TMR84512.1;Parent=gene-E3V42_03245;Dbxref=NCBI_GP:TMR84512.1;Name=TMR84512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357734.1;locus_tag=E3V42_03245;product=MutR family transcriptional regulator;protein_id=TMR84512.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 46234 48159 . + . ID=gene-E3V42_03250;Name=E3V42_03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03250;pseudo=true SOQV01000040.1 Protein Homology CDS 46234 48159 . + 0 ID=cds-E3V42_03250;Parent=gene-E3V42_03250;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280049.1;locus_tag=E3V42_03250;product=protein kinase family protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 48161 49387 . + . ID=gene-E3V42_03255;Name=E3V42_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03255 SOQV01000040.1 Protein Homology CDS 48161 49387 . + 0 ID=cds-TMR84513.1;Parent=gene-E3V42_03255;Dbxref=NCBI_GP:TMR84513.1;Name=TMR84513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862399.1;locus_tag=E3V42_03255;product=MFS transporter;protein_id=TMR84513.1;transl_table=11 SOQV01000040.1 Genbank gene 49546 50241 . + . ID=gene-E3V42_03260;Name=E3V42_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03260 SOQV01000040.1 Protein Homology CDS 49546 50241 . + 0 ID=cds-TMR84514.1;Parent=gene-E3V42_03260;Dbxref=NCBI_GP:TMR84514.1;Name=TMR84514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447044.1;locus_tag=E3V42_03260;product=branched-chain amino acid ABC transporter permease;protein_id=TMR84514.1;transl_table=11 SOQV01000040.1 Genbank gene 50231 50554 . + . ID=gene-E3V42_03265;Name=E3V42_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03265 SOQV01000040.1 Protein Homology CDS 50231 50554 . + 0 ID=cds-TMR84515.1;Parent=gene-E3V42_03265;Dbxref=NCBI_GP:TMR84515.1;Name=TMR84515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447043.1;locus_tag=E3V42_03265;product=AzlD domain-containing protein;protein_id=TMR84515.1;transl_table=11 SOQV01000040.1 Genbank gene 50811 51641 . + . ID=gene-E3V42_03270;Name=E3V42_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03270 SOQV01000040.1 Protein Homology CDS 50811 51641 . + 0 ID=cds-TMR84516.1;Parent=gene-E3V42_03270;Dbxref=NCBI_GP:TMR84516.1;Name=TMR84516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357740.1;locus_tag=E3V42_03270;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR84516.1;transl_table=11 SOQV01000040.1 Genbank gene 51795 52649 . + . ID=gene-E3V42_03275;Name=E3V42_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03275 SOQV01000040.1 Protein Homology CDS 51795 52649 . + 0 ID=cds-TMR84517.1;Parent=gene-E3V42_03275;Dbxref=NCBI_GP:TMR84517.1;Name=TMR84517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447040.1;locus_tag=E3V42_03275;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=TMR84517.1;transl_table=11 SOQV01000040.1 Genbank gene 52749 54122 . + . ID=gene-E3V42_03280;Name=E3V42_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03280 SOQV01000040.1 Protein Homology CDS 52749 54122 . + 0 ID=cds-TMR84518.1;Parent=gene-E3V42_03280;Dbxref=NCBI_GP:TMR84518.1;Name=TMR84518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447039.1;locus_tag=E3V42_03280;product=M20/M25/M40 family metallo-hydrolase;protein_id=TMR84518.1;transl_table=11 SOQV01000040.1 Genbank gene 54115 55176 . + . ID=gene-E3V42_03285;Name=E3V42_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03285 SOQV01000040.1 Protein Homology CDS 54115 55176 . + 0 ID=cds-TMR84519.1;Parent=gene-E3V42_03285;Dbxref=NCBI_GP:TMR84519.1;Name=TMR84519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357743.1;locus_tag=E3V42_03285;product=methionine ABC transporter ATP-binding protein;protein_id=TMR84519.1;transl_table=11 SOQV01000040.1 Genbank gene 55178 55870 . + . ID=gene-E3V42_03290;Name=E3V42_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03290 SOQV01000040.1 Protein Homology CDS 55178 55870 . + 0 ID=cds-TMR84520.1;Parent=gene-E3V42_03290;Dbxref=NCBI_GP:TMR84520.1;Name=TMR84520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447037.1;locus_tag=E3V42_03290;product=ABC transporter permease;protein_id=TMR84520.1;transl_table=11 SOQV01000040.1 Genbank gene 56001 56870 . + . ID=gene-E3V42_03295;Name=E3V42_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03295 SOQV01000040.1 Protein Homology CDS 56001 56870 . + 0 ID=cds-TMR84521.1;Parent=gene-E3V42_03295;Dbxref=NCBI_GP:TMR84521.1;Name=TMR84521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180343.1;locus_tag=E3V42_03295;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR84521.1;transl_table=11 SOQV01000040.1 Genbank gene 57055 58299 . + . ID=gene-E3V42_03300;Name=E3V42_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03300 SOQV01000040.1 Protein Homology CDS 57055 58299 . + 0 ID=cds-TMR84522.1;Parent=gene-E3V42_03300;Dbxref=NCBI_GP:TMR84522.1;Name=TMR84522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014287.1;locus_tag=E3V42_03300;product=transporter;protein_id=TMR84522.1;transl_table=11 SOQV01000040.1 Genbank gene 58337 58540 . + . ID=gene-E3V42_03305;Name=E3V42_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03305 SOQV01000040.1 Protein Homology CDS 58337 58540 . + 0 ID=cds-TMR84523.1;Parent=gene-E3V42_03305;Dbxref=NCBI_GP:TMR84523.1;Name=TMR84523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242033.1;locus_tag=E3V42_03305;product=hypothetical protein;protein_id=TMR84523.1;transl_table=11 SOQV01000040.1 Genbank gene 58735 59304 . - . ID=gene-E3V42_03310;Name=E3V42_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03310 SOQV01000040.1 Protein Homology CDS 58735 59304 . - 0 ID=cds-TMR84524.1;Parent=gene-E3V42_03310;Dbxref=NCBI_GP:TMR84524.1;Name=TMR84524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357745.1;locus_tag=E3V42_03310;product=Trep_Strep domain-containing protein;protein_id=TMR84524.1;transl_table=11 SOQV01000040.1 Genbank gene 59439 60053 . + . ID=gene-E3V42_03315;Name=E3V42_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03315 SOQV01000040.1 Protein Homology CDS 59439 60053 . + 0 ID=cds-TMR84525.1;Parent=gene-E3V42_03315;Dbxref=NCBI_GP:TMR84525.1;Name=TMR84525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447035.1;locus_tag=E3V42_03315;product=DUF624 domain-containing protein;protein_id=TMR84525.1;transl_table=11 SOQV01000040.1 Genbank gene 60031 61701 . + . ID=gene-E3V42_03320;Name=E3V42_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03320 SOQV01000040.1 Protein Homology CDS 60031 61701 . + 0 ID=cds-TMR84646.1;Parent=gene-E3V42_03320;Dbxref=NCBI_GP:TMR84646.1;Name=TMR84646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357747.2;locus_tag=E3V42_03320;product=sensor histidine kinase;protein_id=TMR84646.1;transl_table=11 SOQV01000040.1 Genbank gene 61713 62999 . + . ID=gene-E3V42_03325;Name=E3V42_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03325 SOQV01000040.1 Protein Homology CDS 61713 62999 . + 0 ID=cds-TMR84526.1;Parent=gene-E3V42_03325;Dbxref=NCBI_GP:TMR84526.1;Name=TMR84526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357748.1;locus_tag=E3V42_03325;product=response regulator transcription factor;protein_id=TMR84526.1;transl_table=11 SOQV01000040.1 Genbank gene 63060 63593 . + . ID=gene-E3V42_03330;Name=E3V42_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03330 SOQV01000040.1 Protein Homology CDS 63060 63593 . + 0 ID=cds-TMR84527.1;Parent=gene-E3V42_03330;Dbxref=NCBI_GP:TMR84527.1;Name=TMR84527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399110.1;locus_tag=E3V42_03330;product=ABC transporter permease;protein_id=TMR84527.1;transl_table=11 SOQV01000040.1 Genbank gene 63671 64141 . + . ID=gene-E3V42_03335;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=E3V42_03335 SOQV01000040.1 Protein Homology CDS 63671 64141 . + 0 ID=cds-TMR84528.1;Parent=gene-E3V42_03335;Dbxref=NCBI_GP:TMR84528.1;Name=TMR84528.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357750.2;locus_tag=E3V42_03335;product=ribonucleotide reductase assembly protein NrdI;protein_id=TMR84528.1;transl_table=11 SOQV01000040.1 Genbank gene 64167 64253 . - . ID=gene-E3V42_03340;Name=E3V42_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03340 SOQV01000040.1 Protein Homology CDS 64167 64253 . - 0 ID=cds-TMR84647.1;Parent=gene-E3V42_03340;Dbxref=NCBI_GP:TMR84647.1;Name=TMR84647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001824422.1;locus_tag=E3V42_03340;product=DNA alkylation repair protein;protein_id=TMR84647.1;transl_table=11 SOQV01000040.1 Genbank gene 64434 65696 . - . ID=gene-E3V42_03345;Name=E3V42_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03345 SOQV01000040.1 Protein Homology CDS 64434 65696 . - 0 ID=cds-TMR84529.1;Parent=gene-E3V42_03345;Dbxref=NCBI_GP:TMR84529.1;Name=TMR84529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357751.1;locus_tag=E3V42_03345;product=divalent metal cation transporter;protein_id=TMR84529.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 65840 65973 . + . ID=gene-E3V42_03350;Name=E3V42_03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03350;pseudo=true SOQV01000040.1 Protein Homology CDS 65840 65973 . + 0 ID=cds-E3V42_03350;Parent=gene-E3V42_03350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_03350;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 66064 66522 . - . ID=gene-E3V42_03355;Name=E3V42_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03355 SOQV01000040.1 Protein Homology CDS 66064 66522 . - 0 ID=cds-TMR84530.1;Parent=gene-E3V42_03355;Dbxref=NCBI_GP:TMR84530.1;Name=TMR84530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357752.1;locus_tag=E3V42_03355;product=DUF3021 domain-containing protein;protein_id=TMR84530.1;transl_table=11 SOQV01000040.1 Genbank gene 66519 66959 . - . ID=gene-E3V42_03360;Name=E3V42_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03360 SOQV01000040.1 Protein Homology CDS 66519 66959 . - 0 ID=cds-TMR84531.1;Parent=gene-E3V42_03360;Dbxref=NCBI_GP:TMR84531.1;Name=TMR84531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447029.1;locus_tag=E3V42_03360;product=response regulator transcription factor;protein_id=TMR84531.1;transl_table=11 SOQV01000040.1 Genbank gene 67049 67144 . + . ID=gene-E3V42_03365;Name=E3V42_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03365 SOQV01000040.1 Protein Homology CDS 67049 67144 . + 0 ID=cds-TMR84532.1;Parent=gene-E3V42_03365;Dbxref=NCBI_GP:TMR84532.1;Name=TMR84532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447028.1;locus_tag=E3V42_03365;product=hypothetical protein;protein_id=TMR84532.1;transl_table=11 SOQV01000040.1 Genbank gene 67165 69114 . + . ID=gene-E3V42_03370;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=E3V42_03370 SOQV01000040.1 Protein Homology CDS 67165 69114 . + 0 ID=cds-TMR84533.1;Parent=gene-E3V42_03370;Dbxref=NCBI_GP:TMR84533.1;Name=TMR84533.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357754.1;locus_tag=E3V42_03370;product=DNA mismatch repair endonuclease MutL;protein_id=TMR84533.1;transl_table=11 SOQV01000040.1 Genbank gene 69439 69906 . - . ID=gene-E3V42_03375;Name=E3V42_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03375 SOQV01000040.1 Protein Homology CDS 69439 69906 . - 0 ID=cds-TMR84534.1;Parent=gene-E3V42_03375;Dbxref=NCBI_GP:TMR84534.1;Name=TMR84534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357755.1;locus_tag=E3V42_03375;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TMR84534.1;transl_table=11 SOQV01000040.1 Genbank gene 69907 71112 . - . ID=gene-E3V42_03380;Name=E3V42_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03380 SOQV01000040.1 Protein Homology CDS 69907 71112 . - 0 ID=cds-TMR84535.1;Parent=gene-E3V42_03380;Dbxref=NCBI_GP:TMR84535.1;Name=TMR84535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357756.1;locus_tag=E3V42_03380;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=TMR84535.1;transl_table=11 SOQV01000040.1 Genbank gene 71132 71767 . - . ID=gene-E3V42_03385;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=E3V42_03385 SOQV01000040.1 Protein Homology CDS 71132 71767 . - 0 ID=cds-TMR84536.1;Parent=gene-E3V42_03385;Dbxref=NCBI_GP:TMR84536.1;Name=TMR84536.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357757.1;locus_tag=E3V42_03385;product=riboflavin synthase;protein_id=TMR84536.1;transl_table=11 SOQV01000040.1 Genbank gene 71752 72852 . - . ID=gene-E3V42_03390;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=E3V42_03390 SOQV01000040.1 Protein Homology CDS 71752 72852 . - 0 ID=cds-TMR84537.1;Parent=gene-E3V42_03390;Dbxref=NCBI_GP:TMR84537.1;Name=TMR84537.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357758.1;locus_tag=E3V42_03390;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=TMR84537.1;transl_table=11 SOQV01000040.1 cmsearch riboswitch 72987 73101 . - . ID=id-SOQV01000040.1:72987..73101;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000040.1 Genbank gene 73258 73851 . + . ID=gene-E3V42_03395;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=E3V42_03395 SOQV01000040.1 Protein Homology CDS 73258 73851 . + 0 ID=cds-TMR84538.1;Parent=gene-E3V42_03395;Dbxref=NCBI_GP:TMR84538.1;Name=TMR84538.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357759.1;locus_tag=E3V42_03395;product=Holliday junction branch migration protein RuvA;protein_id=TMR84538.1;transl_table=11 SOQV01000040.1 Genbank gene 73861 74424 . + . ID=gene-E3V42_03400;Name=E3V42_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03400 SOQV01000040.1 Protein Homology CDS 73861 74424 . + 0 ID=cds-TMR84539.1;Parent=gene-E3V42_03400;Dbxref=NCBI_GP:TMR84539.1;Name=TMR84539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357760.1;locus_tag=E3V42_03400;product=DNA-3-methyladenine glycosylase I;protein_id=TMR84539.1;transl_table=11 SOQV01000040.1 Genbank gene 74421 75098 . + . ID=gene-E3V42_03405;Name=E3V42_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03405 SOQV01000040.1 Protein Homology CDS 74421 75098 . + 0 ID=cds-TMR84540.1;Parent=gene-E3V42_03405;Dbxref=NCBI_GP:TMR84540.1;Name=TMR84540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357761.1;locus_tag=E3V42_03405;product=CPBP family intramembrane metalloprotease;protein_id=TMR84540.1;transl_table=11 SOQV01000040.1 Genbank gene 75253 76284 . - . ID=gene-E3V42_03410;Name=E3V42_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03410 SOQV01000040.1 Protein Homology CDS 75253 76284 . - 0 ID=cds-TMR84541.1;Parent=gene-E3V42_03410;Dbxref=NCBI_GP:TMR84541.1;Name=TMR84541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357762.1;locus_tag=E3V42_03410;product=LD-carboxypeptidase;protein_id=TMR84541.1;transl_table=11 SOQV01000040.1 Genbank gene 76598 77281 . - . ID=gene-E3V42_03415;Name=E3V42_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03415 SOQV01000040.1 Protein Homology CDS 76598 77281 . - 0 ID=cds-TMR84542.1;Parent=gene-E3V42_03415;Dbxref=NCBI_GP:TMR84542.1;Name=TMR84542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078028.1;locus_tag=E3V42_03415;product=DUF1129 domain-containing protein;protein_id=TMR84542.1;transl_table=11 SOQV01000040.1 Genbank gene 77293 78237 . - . ID=gene-E3V42_03420;Name=E3V42_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03420 SOQV01000040.1 Protein Homology CDS 77293 78237 . - 0 ID=cds-TMR84543.1;Parent=gene-E3V42_03420;Dbxref=NCBI_GP:TMR84543.1;Name=TMR84543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357764.1;locus_tag=E3V42_03420;product=magnesium transporter CorA family protein;protein_id=TMR84543.1;transl_table=11 SOQV01000040.1 Genbank gene 78369 81200 . + . ID=gene-E3V42_03425;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=E3V42_03425 SOQV01000040.1 Protein Homology CDS 78369 81200 . + 0 ID=cds-TMR84544.1;Parent=gene-E3V42_03425;Dbxref=NCBI_GP:TMR84544.1;Name=TMR84544.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357765.1;locus_tag=E3V42_03425;product=excinuclease ABC subunit UvrA;protein_id=TMR84544.1;transl_table=11 SOQV01000040.1 Genbank gene 81193 82254 . + . ID=gene-E3V42_03430;Name=E3V42_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03430 SOQV01000040.1 Protein Homology CDS 81193 82254 . + 0 ID=cds-TMR84545.1;Parent=gene-E3V42_03430;Dbxref=NCBI_GP:TMR84545.1;Name=TMR84545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447020.1;locus_tag=E3V42_03430;product=aminopeptidase P family protein;protein_id=TMR84545.1;transl_table=11 SOQV01000040.1 Genbank gene 82259 82351 . + . ID=gene-E3V42_03435;Name=E3V42_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03435 SOQV01000040.1 Protein Homology CDS 82259 82351 . + 0 ID=cds-TMR84546.1;Parent=gene-E3V42_03435;Dbxref=NCBI_GP:TMR84546.1;Name=TMR84546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808829.1;locus_tag=E3V42_03435;product=excinuclease ABC subunit A;protein_id=TMR84546.1;transl_table=11 SOQV01000040.1 Genbank gene 82386 82784 . + . ID=gene-E3V42_03440;Name=E3V42_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03440 SOQV01000040.1 Protein Homology CDS 82386 82784 . + 0 ID=cds-TMR84547.1;Parent=gene-E3V42_03440;Dbxref=NCBI_GP:TMR84547.1;Name=TMR84547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357767.1;locus_tag=E3V42_03440;product=transcriptional regulator Spx;protein_id=TMR84547.1;transl_table=11 SOQV01000040.1 Genbank gene 82850 83419 . + . ID=gene-E3V42_03445;Name=E3V42_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03445 SOQV01000040.1 Protein Homology CDS 82850 83419 . + 0 ID=cds-TMR84548.1;Parent=gene-E3V42_03445;Dbxref=NCBI_GP:TMR84548.1;Name=TMR84548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447017.1;locus_tag=E3V42_03445;product=transcriptional regulator;protein_id=TMR84548.1;transl_table=11 SOQV01000040.1 Genbank gene 83506 83772 . + . ID=gene-E3V42_03450;Name=E3V42_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03450 SOQV01000040.1 Protein Homology CDS 83506 83772 . + 0 ID=cds-TMR84549.1;Parent=gene-E3V42_03450;Dbxref=NCBI_GP:TMR84549.1;Name=TMR84549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357769.1;locus_tag=E3V42_03450;product=IreB family regulatory phosphoprotein;protein_id=TMR84549.1;transl_table=11 SOQV01000040.1 Genbank gene 83776 84195 . + . ID=gene-E3V42_03455;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=E3V42_03455 SOQV01000040.1 Protein Homology CDS 83776 84195 . + 0 ID=cds-TMR84550.1;Parent=gene-E3V42_03455;Dbxref=NCBI_GP:TMR84550.1;Name=TMR84550.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357770.1;locus_tag=E3V42_03455;product=Holliday junction resolvase RuvX;protein_id=TMR84550.1;transl_table=11 SOQV01000040.1 Genbank gene 84211 84516 . + . ID=gene-E3V42_03460;Name=E3V42_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03460 SOQV01000040.1 Protein Homology CDS 84211 84516 . + 0 ID=cds-TMR84551.1;Parent=gene-E3V42_03460;Dbxref=NCBI_GP:TMR84551.1;Name=TMR84551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357771.1;locus_tag=E3V42_03460;product=DUF1292 domain-containing protein;protein_id=TMR84551.1;transl_table=11 SOQV01000040.1 Genbank gene 84770 86020 . + . ID=gene-E3V42_03465;Name=E3V42_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03465 SOQV01000040.1 Protein Homology CDS 84770 86020 . + 0 ID=cds-TMR84552.1;Parent=gene-E3V42_03465;Dbxref=NCBI_GP:TMR84552.1;Name=TMR84552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447013.1;locus_tag=E3V42_03465;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMR84552.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 86104 86568 . + . ID=gene-E3V42_03470;Name=E3V42_03470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03470;pseudo=true SOQV01000040.1 Protein Homology CDS 86104 86568 . + 0 ID=cds-E3V42_03470;Parent=gene-E3V42_03470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447012.1;locus_tag=E3V42_03470;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 86676 88208 . + . ID=gene-E3V42_03475;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=E3V42_03475 SOQV01000040.1 Protein Homology CDS 86676 88208 . + 0 ID=cds-TMR84553.1;Parent=gene-E3V42_03475;Dbxref=NCBI_GP:TMR84553.1;Name=TMR84553.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357774.1;locus_tag=E3V42_03475;product=cardiolipin synthase;protein_id=TMR84553.1;transl_table=11 SOQV01000040.1 Genbank gene 88284 88427 . + . ID=gene-E3V42_03480;Name=E3V42_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03480 SOQV01000040.1 Protein Homology CDS 88284 88427 . + 0 ID=cds-TMR84554.1;Parent=gene-E3V42_03480;Dbxref=NCBI_GP:TMR84554.1;Name=TMR84554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447010.1;locus_tag=E3V42_03480;product=hypothetical protein;protein_id=TMR84554.1;transl_table=11 SOQV01000040.1 Genbank gene 88464 90002 . + . ID=gene-E3V42_03485;Name=E3V42_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03485 SOQV01000040.1 Protein Homology CDS 88464 90002 . + 0 ID=cds-TMR84555.1;Parent=gene-E3V42_03485;Dbxref=NCBI_GP:TMR84555.1;Name=TMR84555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447009.1;locus_tag=E3V42_03485;product=damage-inducible protein CinA;protein_id=TMR84555.1;transl_table=11 SOQV01000040.1 Genbank gene 90116 92329 . + . ID=gene-E3V42_03490;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=E3V42_03490 SOQV01000040.1 Protein Homology CDS 90116 92329 . + 0 ID=cds-TMR84556.1;Parent=gene-E3V42_03490;Dbxref=NCBI_GP:TMR84556.1;Name=TMR84556.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447008.1;locus_tag=E3V42_03490;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=TMR84556.1;transl_table=11 SOQV01000040.1 Genbank gene 92341 92481 . + . ID=gene-E3V42_03495;Name=E3V42_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03495 SOQV01000040.1 Protein Homology CDS 92341 92481 . + 0 ID=cds-TMR84557.1;Parent=gene-E3V42_03495;Dbxref=NCBI_GP:TMR84557.1;Name=TMR84557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447007.1;locus_tag=E3V42_03495;product=hypothetical protein;protein_id=TMR84557.1;transl_table=11 SOQV01000040.1 Genbank gene 92525 93031 . + . ID=gene-E3V42_03500;Name=E3V42_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03500 SOQV01000040.1 Protein Homology CDS 92525 93031 . + 0 ID=cds-TMR84558.1;Parent=gene-E3V42_03500;Dbxref=NCBI_GP:TMR84558.1;Name=TMR84558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447006.1;locus_tag=E3V42_03500;product=GNAT family N-acetyltransferase;protein_id=TMR84558.1;transl_table=11 SOQV01000040.1 Genbank gene 93024 93614 . + . ID=gene-E3V42_03505;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=E3V42_03505 SOQV01000040.1 Protein Homology CDS 93024 93614 . + 0 ID=cds-TMR84559.1;Parent=gene-E3V42_03505;Dbxref=NCBI_GP:TMR84559.1;Name=TMR84559.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357779.1;locus_tag=E3V42_03505;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=TMR84559.1;transl_table=11 SOQV01000040.1 Genbank gene 93611 94228 . + . ID=gene-E3V42_03510;Name=E3V42_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03510 SOQV01000040.1 Protein Homology CDS 93611 94228 . + 0 ID=cds-TMR84560.1;Parent=gene-E3V42_03510;Dbxref=NCBI_GP:TMR84560.1;Name=TMR84560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357780.1;locus_tag=E3V42_03510;product=phosphoribulokinase;protein_id=TMR84560.1;transl_table=11 SOQV01000040.1 Genbank gene 94482 94790 . + . ID=gene-E3V42_03515;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=E3V42_03515 SOQV01000040.1 Protein Homology CDS 94482 94790 . + 0 ID=cds-TMR84561.1;Parent=gene-E3V42_03515;Dbxref=NCBI_GP:TMR84561.1;Name=TMR84561.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=E3V42_03515;product=30S ribosomal protein S10;protein_id=TMR84561.1;transl_table=11 SOQV01000040.1 Genbank gene 95007 95633 . + . ID=gene-E3V42_03520;Name=E3V42_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03520 SOQV01000040.1 Protein Homology CDS 95007 95633 . + 0 ID=cds-TMR84562.1;Parent=gene-E3V42_03520;Dbxref=NCBI_GP:TMR84562.1;Name=TMR84562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=E3V42_03520;product=50S ribosomal protein L3;protein_id=TMR84562.1;transl_table=11 SOQV01000040.1 Genbank gene 95658 96281 . + . ID=gene-E3V42_03525;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=E3V42_03525 SOQV01000040.1 Protein Homology CDS 95658 96281 . + 0 ID=cds-TMR84563.1;Parent=gene-E3V42_03525;Dbxref=NCBI_GP:TMR84563.1;Name=TMR84563.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=E3V42_03525;product=50S ribosomal protein L4;protein_id=TMR84563.1;transl_table=11 SOQV01000040.1 Genbank gene 96281 96577 . + . ID=gene-E3V42_03530;Name=E3V42_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03530 SOQV01000040.1 Protein Homology CDS 96281 96577 . + 0 ID=cds-TMR84564.1;Parent=gene-E3V42_03530;Dbxref=NCBI_GP:TMR84564.1;Name=TMR84564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=E3V42_03530;product=50S ribosomal protein L23;protein_id=TMR84564.1;transl_table=11 SOQV01000040.1 Genbank gene 96595 97428 . + . ID=gene-E3V42_03535;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=E3V42_03535 SOQV01000040.1 Protein Homology CDS 96595 97428 . + 0 ID=cds-TMR84565.1;Parent=gene-E3V42_03535;Dbxref=NCBI_GP:TMR84565.1;Name=TMR84565.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=E3V42_03535;product=50S ribosomal protein L2;protein_id=TMR84565.1;transl_table=11 SOQV01000040.1 Genbank gene 97532 97813 . + . ID=gene-E3V42_03540;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=E3V42_03540 SOQV01000040.1 Protein Homology CDS 97532 97813 . + 0 ID=cds-TMR84566.1;Parent=gene-E3V42_03540;Dbxref=NCBI_GP:TMR84566.1;Name=TMR84566.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357786.1;locus_tag=E3V42_03540;product=30S ribosomal protein S19;protein_id=TMR84566.1;transl_table=11 SOQV01000040.1 Genbank gene 97825 98169 . + . ID=gene-E3V42_03545;Name=E3V42_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03545 SOQV01000040.1 Protein Homology CDS 97825 98169 . + 0 ID=cds-TMR84567.1;Parent=gene-E3V42_03545;Dbxref=NCBI_GP:TMR84567.1;Name=TMR84567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=E3V42_03545;product=50S ribosomal protein L22;protein_id=TMR84567.1;transl_table=11 SOQV01000040.1 Genbank gene 98182 98835 . + . ID=gene-E3V42_03550;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=E3V42_03550 SOQV01000040.1 Protein Homology CDS 98182 98835 . + 0 ID=cds-TMR84568.1;Parent=gene-E3V42_03550;Dbxref=NCBI_GP:TMR84568.1;Name=TMR84568.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=E3V42_03550;product=30S ribosomal protein S3;protein_id=TMR84568.1;transl_table=11 SOQV01000040.1 Genbank gene 98839 99252 . + . ID=gene-E3V42_03555;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=E3V42_03555 SOQV01000040.1 Protein Homology CDS 98839 99252 . + 0 ID=cds-TMR84569.1;Parent=gene-E3V42_03555;Dbxref=NCBI_GP:TMR84569.1;Name=TMR84569.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=E3V42_03555;product=50S ribosomal protein L16;protein_id=TMR84569.1;transl_table=11 SOQV01000040.1 Genbank gene 99262 99468 . + . ID=gene-E3V42_03560;Name=E3V42_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03560 SOQV01000040.1 Protein Homology CDS 99262 99468 . + 0 ID=cds-TMR84570.1;Parent=gene-E3V42_03560;Dbxref=NCBI_GP:TMR84570.1;Name=TMR84570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357791.1;locus_tag=E3V42_03560;product=50S ribosomal protein L29;protein_id=TMR84570.1;transl_table=11 SOQV01000040.1 Genbank gene 99493 99753 . + . ID=gene-E3V42_03565;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=E3V42_03565 SOQV01000040.1 Protein Homology CDS 99493 99753 . + 0 ID=cds-TMR84571.1;Parent=gene-E3V42_03565;Dbxref=NCBI_GP:TMR84571.1;Name=TMR84571.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=E3V42_03565;product=30S ribosomal protein S17;protein_id=TMR84571.1;transl_table=11 SOQV01000040.1 Genbank gene 99779 100147 . + . ID=gene-E3V42_03570;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=E3V42_03570 SOQV01000040.1 Protein Homology CDS 99779 100147 . + 0 ID=cds-TMR84572.1;Parent=gene-E3V42_03570;Dbxref=NCBI_GP:TMR84572.1;Name=TMR84572.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357793.1;locus_tag=E3V42_03570;product=50S ribosomal protein L14;protein_id=TMR84572.1;transl_table=11 SOQV01000040.1 Genbank gene 100330 100635 . + . ID=gene-E3V42_03575;Name=E3V42_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03575 SOQV01000040.1 Protein Homology CDS 100330 100635 . + 0 ID=cds-TMR84573.1;Parent=gene-E3V42_03575;Dbxref=NCBI_GP:TMR84573.1;Name=TMR84573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=E3V42_03575;product=50S ribosomal protein L24;protein_id=TMR84573.1;transl_table=11 SOQV01000040.1 Genbank gene 100659 101201 . + . ID=gene-E3V42_03580;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=E3V42_03580 SOQV01000040.1 Protein Homology CDS 100659 101201 . + 0 ID=cds-TMR84574.1;Parent=gene-E3V42_03580;Dbxref=NCBI_GP:TMR84574.1;Name=TMR84574.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=E3V42_03580;product=50S ribosomal protein L5;protein_id=TMR84574.1;transl_table=11 SOQV01000040.1 Genbank gene 101219 101488 . + . ID=gene-E3V42_03585;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=E3V42_03585 SOQV01000040.1 Protein Homology CDS 101219 101488 . + 0 ID=cds-TMR84575.1;Parent=gene-E3V42_03585;Dbxref=NCBI_GP:TMR84575.1;Name=TMR84575.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357796.1;locus_tag=E3V42_03585;product=30S ribosomal protein S14;protein_id=TMR84575.1;transl_table=11 SOQV01000040.1 Genbank gene 101774 102172 . + . ID=gene-E3V42_03590;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=E3V42_03590 SOQV01000040.1 Protein Homology CDS 101774 102172 . + 0 ID=cds-TMR84576.1;Parent=gene-E3V42_03590;Dbxref=NCBI_GP:TMR84576.1;Name=TMR84576.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=E3V42_03590;product=30S ribosomal protein S8;protein_id=TMR84576.1;transl_table=11 SOQV01000040.1 Genbank gene 102360 102896 . + . ID=gene-E3V42_03595;Name=E3V42_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03595 SOQV01000040.1 Protein Homology CDS 102360 102896 . + 0 ID=cds-TMR84577.1;Parent=gene-E3V42_03595;Dbxref=NCBI_GP:TMR84577.1;Name=TMR84577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=E3V42_03595;product=50S ribosomal protein L6;protein_id=TMR84577.1;transl_table=11 SOQV01000040.1 Genbank gene 102980 103336 . + . ID=gene-E3V42_03600;Name=E3V42_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03600 SOQV01000040.1 Protein Homology CDS 102980 103336 . + 0 ID=cds-TMR84578.1;Parent=gene-E3V42_03600;Dbxref=NCBI_GP:TMR84578.1;Name=TMR84578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357799.1;locus_tag=E3V42_03600;product=50S ribosomal protein L18;protein_id=TMR84578.1;transl_table=11 SOQV01000040.1 Genbank gene 103354 103848 . + . ID=gene-E3V42_03605;Name=E3V42_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03605 SOQV01000040.1 Protein Homology CDS 103354 103848 . + 0 ID=cds-TMR84579.1;Parent=gene-E3V42_03605;Dbxref=NCBI_GP:TMR84579.1;Name=TMR84579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=E3V42_03605;product=30S ribosomal protein S5;protein_id=TMR84579.1;transl_table=11 SOQV01000040.1 Genbank gene 103820 104044 . + . ID=gene-E3V42_03610;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=E3V42_03610 SOQV01000040.1 Protein Homology CDS 103820 104044 . + 0 ID=cds-TMR84580.1;Parent=gene-E3V42_03610;Dbxref=NCBI_GP:TMR84580.1;Name=TMR84580.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386624.1;locus_tag=E3V42_03610;product=50S ribosomal protein L30;protein_id=TMR84580.1;transl_table=11 SOQV01000040.1 Genbank gene 104189 104629 . + . ID=gene-E3V42_03615;Name=E3V42_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03615 SOQV01000040.1 Protein Homology CDS 104189 104629 . + 0 ID=cds-TMR84581.1;Parent=gene-E3V42_03615;Dbxref=NCBI_GP:TMR84581.1;Name=TMR84581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357802.1;locus_tag=E3V42_03615;product=50S ribosomal protein L15;protein_id=TMR84581.1;transl_table=11 SOQV01000040.1 Genbank gene 104642 105952 . + . ID=gene-E3V42_03620;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=E3V42_03620 SOQV01000040.1 Protein Homology CDS 104642 105952 . + 0 ID=cds-TMR84582.1;Parent=gene-E3V42_03620;Dbxref=NCBI_GP:TMR84582.1;Name=TMR84582.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357803.1;locus_tag=E3V42_03620;product=preprotein translocase subunit SecY;protein_id=TMR84582.1;transl_table=11 SOQV01000040.1 Genbank gene 105962 106051 . + . ID=gene-E3V42_03625;Name=E3V42_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03625 SOQV01000040.1 Protein Homology CDS 105962 106051 . + 0 ID=cds-TMR84648.1;Parent=gene-E3V42_03625;Dbxref=NCBI_GP:TMR84648.1;Name=TMR84648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_03625;product=DNA alkylation repair protein;protein_id=TMR84648.1;transl_table=11 SOQV01000040.1 Genbank gene 106217 106855 . + . ID=gene-E3V42_03630;Name=E3V42_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03630 SOQV01000040.1 Protein Homology CDS 106217 106855 . + 0 ID=cds-TMR84583.1;Parent=gene-E3V42_03630;Dbxref=NCBI_GP:TMR84583.1;Name=TMR84583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357804.1;locus_tag=E3V42_03630;product=adenylate kinase;protein_id=TMR84583.1;transl_table=11 SOQV01000040.1 Genbank gene 106972 107190 . + . ID=gene-E3V42_03635;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=E3V42_03635 SOQV01000040.1 Protein Homology CDS 106972 107190 . + 0 ID=cds-TMR84584.1;Parent=gene-E3V42_03635;Dbxref=NCBI_GP:TMR84584.1;Name=TMR84584.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001034141.1;locus_tag=E3V42_03635;product=translation initiation factor IF-1;protein_id=TMR84584.1;transl_table=11 SOQV01000040.1 Genbank gene 107215 107331 . + . ID=gene-E3V42_03640;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=E3V42_03640 SOQV01000040.1 Protein Homology CDS 107215 107331 . + 0 ID=cds-TMR84585.1;Parent=gene-E3V42_03640;Dbxref=NCBI_GP:TMR84585.1;Name=TMR84585.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=E3V42_03640;product=50S ribosomal protein L36;protein_id=TMR84585.1;transl_table=11 SOQV01000040.1 Genbank gene 107349 107714 . + . ID=gene-E3V42_03645;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=E3V42_03645 SOQV01000040.1 Protein Homology CDS 107349 107714 . + 0 ID=cds-TMR84586.1;Parent=gene-E3V42_03645;Dbxref=NCBI_GP:TMR84586.1;Name=TMR84586.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=E3V42_03645;product=30S ribosomal protein S13;protein_id=TMR84586.1;transl_table=11 SOQV01000040.1 Genbank gene 107732 108115 . + . ID=gene-E3V42_03650;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=E3V42_03650 SOQV01000040.1 Protein Homology CDS 107732 108115 . + 0 ID=cds-TMR84587.1;Parent=gene-E3V42_03650;Dbxref=NCBI_GP:TMR84587.1;Name=TMR84587.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374461.1;locus_tag=E3V42_03650;product=30S ribosomal protein S11;protein_id=TMR84587.1;transl_table=11 SOQV01000040.1 Genbank gene 108158 109093 . + . ID=gene-E3V42_03655;Name=E3V42_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03655 SOQV01000040.1 Protein Homology CDS 108158 109093 . + 0 ID=cds-TMR84588.1;Parent=gene-E3V42_03655;Dbxref=NCBI_GP:TMR84588.1;Name=TMR84588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=E3V42_03655;product=DNA-directed RNA polymerase subunit alpha;protein_id=TMR84588.1;transl_table=11 SOQV01000040.1 Genbank gene 109105 109491 . + . ID=gene-E3V42_03660;Name=E3V42_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03660 SOQV01000040.1 Protein Homology CDS 109105 109491 . + 0 ID=cds-TMR84589.1;Parent=gene-E3V42_03660;Dbxref=NCBI_GP:TMR84589.1;Name=TMR84589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=E3V42_03660;product=50S ribosomal protein L17;protein_id=TMR84589.1;transl_table=11 SOQV01000040.1 Genbank gene 109756 110022 . + . ID=gene-E3V42_03665;Name=E3V42_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03665 SOQV01000040.1 Protein Homology CDS 109756 110022 . + 0 ID=cds-TMR84590.1;Parent=gene-E3V42_03665;Dbxref=NCBI_GP:TMR84590.1;Name=TMR84590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357811.2;locus_tag=E3V42_03665;product=ACT domain-containing protein;protein_id=TMR84590.1;transl_table=11 SOQV01000040.1 Genbank gene 110032 111369 . + . ID=gene-E3V42_03670;Name=E3V42_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03670 SOQV01000040.1 Protein Homology CDS 110032 111369 . + 0 ID=cds-TMR84591.1;Parent=gene-E3V42_03670;Dbxref=NCBI_GP:TMR84591.1;Name=TMR84591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=E3V42_03670;product=PFL family protein;protein_id=TMR84591.1;transl_table=11 SOQV01000040.1 Genbank gene 111614 112306 . + . ID=gene-E3V42_03675;Name=E3V42_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03675 SOQV01000040.1 Protein Homology CDS 111614 112306 . + 0 ID=cds-TMR84592.1;Parent=gene-E3V42_03675;Dbxref=NCBI_GP:TMR84592.1;Name=TMR84592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399263.1;locus_tag=E3V42_03675;product=histidine phosphatase family protein;protein_id=TMR84592.1;transl_table=11 SOQV01000040.1 Genbank gene 112605 114263 . - . ID=gene-E3V42_03680;Name=E3V42_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03680 SOQV01000040.1 Protein Homology CDS 112605 114263 . - 0 ID=cds-TMR84593.1;Parent=gene-E3V42_03680;Dbxref=NCBI_GP:TMR84593.1;Name=TMR84593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100973.1;locus_tag=E3V42_03680;product=iron ABC transporter permease;protein_id=TMR84593.1;transl_table=11 SOQV01000040.1 Genbank gene 114253 115344 . - . ID=gene-E3V42_03685;Name=E3V42_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03685 SOQV01000040.1 Protein Homology CDS 114253 115344 . - 0 ID=cds-TMR84594.1;Parent=gene-E3V42_03685;Dbxref=NCBI_GP:TMR84594.1;Name=TMR84594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357816.1;locus_tag=E3V42_03685;product=ABC transporter ATP-binding protein;protein_id=TMR84594.1;transl_table=11 SOQV01000040.1 Genbank gene 115357 116403 . - . ID=gene-E3V42_03690;Name=E3V42_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03690 SOQV01000040.1 Protein Homology CDS 115357 116403 . - 0 ID=cds-TMR84595.1;Parent=gene-E3V42_03690;Dbxref=NCBI_GP:TMR84595.1;Name=TMR84595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731174.1;locus_tag=E3V42_03690;product=extracellular solute-binding protein;protein_id=TMR84595.1;transl_table=11 SOQV01000040.1 Genbank gene 116515 117288 . - . ID=gene-E3V42_03695;Name=E3V42_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03695 SOQV01000040.1 Protein Homology CDS 116515 117288 . - 0 ID=cds-TMR84596.1;Parent=gene-E3V42_03695;Dbxref=NCBI_GP:TMR84596.1;Name=TMR84596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475411.1;locus_tag=E3V42_03695;product=response regulator;protein_id=TMR84596.1;transl_table=11 SOQV01000040.1 Genbank gene 117281 118930 . - . ID=gene-E3V42_03700;Name=E3V42_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03700 SOQV01000040.1 Protein Homology CDS 117281 118930 . - 0 ID=cds-TMR84597.1;Parent=gene-E3V42_03700;Dbxref=NCBI_GP:TMR84597.1;Name=TMR84597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019718.1;locus_tag=E3V42_03700;product=sensor histidine kinase;protein_id=TMR84597.1;transl_table=11 SOQV01000040.1 Genbank gene 119078 121579 . + . ID=gene-E3V42_03705;Name=E3V42_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03705 SOQV01000040.1 Protein Homology CDS 119078 121579 . + 0 ID=cds-TMR84598.1;Parent=gene-E3V42_03705;Dbxref=NCBI_GP:TMR84598.1;Name=TMR84598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357829.1;locus_tag=E3V42_03705;product=leucine--tRNA ligase;protein_id=TMR84598.1;transl_table=11 SOQV01000040.1 Genbank gene 121744 122610 . + . ID=gene-E3V42_03710;Name=E3V42_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03710 SOQV01000040.1 Protein Homology CDS 121744 122610 . + 0 ID=cds-TMR84599.1;Parent=gene-E3V42_03710;Dbxref=NCBI_GP:TMR84599.1;Name=TMR84599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446968.1;locus_tag=E3V42_03710;product=ABC transporter ATP-binding protein;protein_id=TMR84599.1;transl_table=11 SOQV01000040.1 Genbank gene 122610 123452 . + . ID=gene-E3V42_03715;Name=E3V42_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03715 SOQV01000040.1 Protein Homology CDS 122610 123452 . + 0 ID=cds-TMR84600.1;Parent=gene-E3V42_03715;Dbxref=NCBI_GP:TMR84600.1;Name=TMR84600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446967.1;locus_tag=E3V42_03715;product=ABC transporter permease;protein_id=TMR84600.1;transl_table=11 SOQV01000040.1 Genbank gene 123471 123926 . + . ID=gene-E3V42_03720;Name=E3V42_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03720 SOQV01000040.1 Protein Homology CDS 123471 123926 . + 0 ID=cds-TMR84601.1;Parent=gene-E3V42_03720;Dbxref=NCBI_GP:TMR84601.1;Name=TMR84601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446966.1;locus_tag=E3V42_03720;product=LytTR family transcriptional regulator;protein_id=TMR84601.1;transl_table=11 SOQV01000040.1 Genbank gene 123936 124355 . + . ID=gene-E3V42_03725;Name=E3V42_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03725 SOQV01000040.1 Protein Homology CDS 123936 124355 . + 0 ID=cds-TMR84602.1;Parent=gene-E3V42_03725;Dbxref=NCBI_GP:TMR84602.1;Name=TMR84602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446965.1;locus_tag=E3V42_03725;product=DUF3021 domain-containing protein;protein_id=TMR84602.1;transl_table=11 SOQV01000040.1 Genbank gene 124450 125145 . + . ID=gene-E3V42_03730;Name=E3V42_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03730 SOQV01000040.1 Protein Homology CDS 124450 125145 . + 0 ID=cds-TMR84603.1;Parent=gene-E3V42_03730;Dbxref=NCBI_GP:TMR84603.1;Name=TMR84603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357830.1;locus_tag=E3V42_03730;product=N-acetyltransferase;protein_id=TMR84603.1;transl_table=11 SOQV01000040.1 Genbank gene 125157 125573 . + . ID=gene-E3V42_03735;Name=E3V42_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03735 SOQV01000040.1 Protein Homology CDS 125157 125573 . + 0 ID=cds-TMR84604.1;Parent=gene-E3V42_03735;Dbxref=NCBI_GP:TMR84604.1;Name=TMR84604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357831.1;locus_tag=E3V42_03735;product=N-acetyltransferase;protein_id=TMR84604.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 126162 126233 . + . ID=gene-E3V42_03740;Name=E3V42_03740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03740;pseudo=true SOQV01000040.1 Protein Homology CDS 126162 126233 . + 0 ID=cds-E3V42_03740;Parent=gene-E3V42_03740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_03740;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 126213 126329 . - . ID=gene-E3V42_03745;Name=E3V42_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03745 SOQV01000040.1 Protein Homology CDS 126213 126329 . - 0 ID=cds-TMR84605.1;Parent=gene-E3V42_03745;Dbxref=NCBI_GP:TMR84605.1;Name=TMR84605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=E3V42_03745;product=type I toxin-antitoxin system Fst family toxin;protein_id=TMR84605.1;transl_table=11 SOQV01000040.1 Genbank gene 126672 126764 . - . ID=gene-E3V42_03750;Name=E3V42_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03750 SOQV01000040.1 Protein Homology CDS 126672 126764 . - 0 ID=cds-TMR84606.1;Parent=gene-E3V42_03750;Dbxref=NCBI_GP:TMR84606.1;Name=TMR84606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=E3V42_03750;product=type I toxin-antitoxin system Fst family toxin;protein_id=TMR84606.1;transl_table=11 SOQV01000040.1 Genbank gene 126896 127894 . + . ID=gene-E3V42_03755;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=E3V42_03755 SOQV01000040.1 Protein Homology CDS 126896 127894 . + 0 ID=cds-TMR84607.1;Parent=gene-E3V42_03755;Dbxref=NCBI_GP:TMR84607.1;Name=TMR84607.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357832.1;locus_tag=E3V42_03755;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TMR84607.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 127875 128447 . + . ID=gene-E3V42_03760;Name=E3V42_03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03760;pseudo=true SOQV01000040.1 Protein Homology CDS 127875 128447 . + 0 ID=cds-E3V42_03760;Parent=gene-E3V42_03760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357833.1;locus_tag=E3V42_03760;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 128631 128750 . - . ID=gene-E3V42_03765;Name=E3V42_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03765 SOQV01000040.1 Protein Homology CDS 128631 128750 . - 0 ID=cds-TMR84649.1;Parent=gene-E3V42_03765;Dbxref=NCBI_GP:TMR84649.1;Name=TMR84649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_03765;product=DNA alkylation repair protein;protein_id=TMR84649.1;transl_table=11 SOQV01000040.1 Genbank gene 128793 129551 . + . ID=gene-E3V42_03770;Name=E3V42_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03770 SOQV01000040.1 Protein Homology CDS 128793 129551 . + 0 ID=cds-TMR84608.1;Parent=gene-E3V42_03770;Dbxref=NCBI_GP:TMR84608.1;Name=TMR84608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446955.1;locus_tag=E3V42_03770;product=isoprenyl transferase;protein_id=TMR84608.1;transl_table=11 SOQV01000040.1 Genbank gene 129560 130363 . + . ID=gene-E3V42_03775;Name=E3V42_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03775 SOQV01000040.1 Protein Homology CDS 129560 130363 . + 0 ID=cds-TMR84609.1;Parent=gene-E3V42_03775;Dbxref=NCBI_GP:TMR84609.1;Name=TMR84609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357835.1;locus_tag=E3V42_03775;product=phosphatidate cytidylyltransferase;protein_id=TMR84609.1;transl_table=11 SOQV01000040.1 Genbank gene 130385 131644 . + . ID=gene-E3V42_03780;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=E3V42_03780 SOQV01000040.1 Protein Homology CDS 130385 131644 . + 0 ID=cds-TMR84610.1;Parent=gene-E3V42_03780;Dbxref=NCBI_GP:TMR84610.1;Name=TMR84610.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357836.1;locus_tag=E3V42_03780;product=RIP metalloprotease RseP;protein_id=TMR84610.1;transl_table=11 SOQV01000040.1 Genbank gene 131657 133510 . + . ID=gene-E3V42_03785;Name=E3V42_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03785 SOQV01000040.1 Protein Homology CDS 131657 133510 . + 0 ID=cds-TMR84611.1;Parent=gene-E3V42_03785;Dbxref=NCBI_GP:TMR84611.1;Name=TMR84611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446952.1;locus_tag=E3V42_03785;product=proline--tRNA ligase;protein_id=TMR84611.1;transl_table=11 SOQV01000040.1 Genbank gene 133609 134988 . + . ID=gene-E3V42_03790;Name=E3V42_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03790 SOQV01000040.1 Protein Homology CDS 133609 134988 . + 0 ID=cds-TMR84612.1;Parent=gene-E3V42_03790;Dbxref=NCBI_GP:TMR84612.1;Name=TMR84612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357838.1;locus_tag=E3V42_03790;product=glycoside hydrolase family 1 protein;protein_id=TMR84612.1;transl_table=11 SOQV01000040.1 Genbank gene 135180 136988 . + . ID=gene-E3V42_03795;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=E3V42_03795 SOQV01000040.1 Protein Homology CDS 135180 136988 . + 0 ID=cds-TMR84613.1;Parent=gene-E3V42_03795;Dbxref=NCBI_GP:TMR84613.1;Name=TMR84613.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357839.1;locus_tag=E3V42_03795;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=TMR84613.1;transl_table=11 SOQV01000040.1 Genbank gene 137433 139202 . + . ID=gene-E3V42_03800;Name=E3V42_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03800 SOQV01000040.1 Protein Homology CDS 137433 139202 . + 0 ID=cds-TMR84614.1;Parent=gene-E3V42_03800;Dbxref=NCBI_GP:TMR84614.1;Name=TMR84614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357950.1;locus_tag=E3V42_03800;product=PTS mannitol transporter subunit IICBA;protein_id=TMR84614.1;transl_table=11 SOQV01000040.1 Genbank gene 139226 141181 . + . ID=gene-E3V42_03805;Name=E3V42_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03805 SOQV01000040.1 Protein Homology CDS 139226 141181 . + 0 ID=cds-TMR84615.1;Parent=gene-E3V42_03805;Dbxref=NCBI_GP:TMR84615.1;Name=TMR84615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357951.1;locus_tag=E3V42_03805;product=transcription antiterminator;protein_id=TMR84615.1;transl_table=11 SOQV01000040.1 Genbank gene 141183 141620 . + . ID=gene-E3V42_03810;Name=E3V42_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03810 SOQV01000040.1 Protein Homology CDS 141183 141620 . + 0 ID=cds-TMR84616.1;Parent=gene-E3V42_03810;Dbxref=NCBI_GP:TMR84616.1;Name=TMR84616.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357952.1;locus_tag=E3V42_03810;product=PTS mannitol transporter subunit IIA;protein_id=TMR84616.1;transl_table=11 SOQV01000040.1 Genbank gene 141682 142818 . + . ID=gene-E3V42_03815;Name=E3V42_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03815 SOQV01000040.1 Protein Homology CDS 141682 142818 . + 0 ID=cds-TMR84617.1;Parent=gene-E3V42_03815;Dbxref=NCBI_GP:TMR84617.1;Name=TMR84617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357953.1;locus_tag=E3V42_03815;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=TMR84617.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 142940 143014 . - . ID=gene-E3V42_03820;Name=E3V42_03820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03820;pseudo=true SOQV01000040.1 Protein Homology CDS 142940 143014 . - 0 ID=cds-E3V42_03820;Parent=gene-E3V42_03820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_03820;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 143070 144119 . + . ID=gene-E3V42_03825;Name=E3V42_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03825 SOQV01000040.1 Protein Homology CDS 143070 144119 . + 0 ID=cds-TMR84650.1;Parent=gene-E3V42_03825;Dbxref=NCBI_GP:TMR84650.1;Name=TMR84650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446949.1;locus_tag=E3V42_03825;product=LLM class flavin-dependent oxidoreductase;protein_id=TMR84650.1;transl_table=11 SOQV01000040.1 Genbank gene 144340 145347 . + . ID=gene-E3V42_03830;Name=E3V42_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03830 SOQV01000040.1 Protein Homology CDS 144340 145347 . + 0 ID=cds-TMR84618.1;Parent=gene-E3V42_03830;Dbxref=NCBI_GP:TMR84618.1;Name=TMR84618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202170.1;locus_tag=E3V42_03830;product=uroporphyrinogen decarboxylase;protein_id=TMR84618.1;transl_table=11 SOQV01000040.1 Genbank gene 145357 145560 . + . ID=gene-E3V42_03835;Name=E3V42_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03835 SOQV01000040.1 Protein Homology CDS 145357 145560 . + 0 ID=cds-TMR84619.1;Parent=gene-E3V42_03835;Dbxref=NCBI_GP:TMR84619.1;Name=TMR84619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823549.1;locus_tag=E3V42_03835;product=hypothetical protein;protein_id=TMR84619.1;transl_table=11 SOQV01000040.1 Genbank gene 145563 146561 . + . ID=gene-E3V42_03840;Name=E3V42_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03840 SOQV01000040.1 Protein Homology CDS 145563 146561 . + 0 ID=cds-TMR84620.1;Parent=gene-E3V42_03840;Dbxref=NCBI_GP:TMR84620.1;Name=TMR84620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291549.1;locus_tag=E3V42_03840;product=uroporphyrinogen decarboxylase;protein_id=TMR84620.1;transl_table=11 SOQV01000040.1 Genbank gene 146573 147451 . + . ID=gene-E3V42_03845;Name=E3V42_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03845 SOQV01000040.1 Protein Homology CDS 146573 147451 . + 0 ID=cds-TMR84621.1;Parent=gene-E3V42_03845;Dbxref=NCBI_GP:TMR84621.1;Name=TMR84621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036020.1;locus_tag=E3V42_03845;product=transporter substrate-binding domain-containing protein;protein_id=TMR84621.1;transl_table=11 SOQV01000040.1 Genbank gene 147429 147551 . - . ID=gene-E3V42_03850;Name=E3V42_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03850 SOQV01000040.1 Protein Homology CDS 147429 147551 . - 0 ID=cds-TMR84651.1;Parent=gene-E3V42_03850;Dbxref=NCBI_GP:TMR84651.1;Name=TMR84651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823338.1;locus_tag=E3V42_03850;product=lysyl-tRNA synthetase;protein_id=TMR84651.1;transl_table=11 SOQV01000040.1 Genbank gene 147637 148329 . + . ID=gene-E3V42_03855;Name=E3V42_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03855 SOQV01000040.1 Protein Homology CDS 147637 148329 . + 0 ID=cds-TMR84622.1;Parent=gene-E3V42_03855;Dbxref=NCBI_GP:TMR84622.1;Name=TMR84622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036019.1;locus_tag=E3V42_03855;product=amino acid ABC transporter permease;protein_id=TMR84622.1;transl_table=11 SOQV01000040.1 Genbank gene 148333 149055 . + . ID=gene-E3V42_03860;Name=E3V42_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03860 SOQV01000040.1 Protein Homology CDS 148333 149055 . + 0 ID=cds-TMR84623.1;Parent=gene-E3V42_03860;Dbxref=NCBI_GP:TMR84623.1;Name=TMR84623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362517.1;locus_tag=E3V42_03860;product=amino acid ABC transporter permease;protein_id=TMR84623.1;transl_table=11 SOQV01000040.1 Genbank gene 149065 149829 . + . ID=gene-E3V42_03865;Name=E3V42_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03865 SOQV01000040.1 Protein Homology CDS 149065 149829 . + 0 ID=cds-TMR84624.1;Parent=gene-E3V42_03865;Dbxref=NCBI_GP:TMR84624.1;Name=TMR84624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036017.1;locus_tag=E3V42_03865;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR84624.1;transl_table=11 SOQV01000040.1 Genbank gene 149905 153915 . - . ID=gene-E3V42_03870;Name=E3V42_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03870 SOQV01000040.1 Protein Homology CDS 149905 153915 . - 0 ID=cds-TMR84625.1;Parent=gene-E3V42_03870;Dbxref=NCBI_GP:TMR84625.1;Name=TMR84625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=E3V42_03870;product=pullulanase;protein_id=TMR84625.1;transl_table=11 SOQV01000040.1 Genbank gene 154497 156494 . + . ID=gene-E3V42_03875;Name=E3V42_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03875 SOQV01000040.1 Protein Homology CDS 154497 156494 . + 0 ID=cds-TMR84626.1;Parent=gene-E3V42_03875;Dbxref=NCBI_GP:TMR84626.1;Name=TMR84626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071074.1;locus_tag=E3V42_03875;product=thiol-activated cytolysin;protein_id=TMR84626.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 156597 156680 . - . ID=gene-E3V42_03880;Name=E3V42_03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03880;pseudo=true SOQV01000040.1 Protein Homology CDS 156597 156680 . - 0 ID=cds-E3V42_03880;Parent=gene-E3V42_03880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=E3V42_03880;product=cytidylate kinase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank pseudogene 156752 156912 . - . ID=gene-E3V42_03885;Name=E3V42_03885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03885;pseudo=true SOQV01000040.1 Protein Homology CDS 156752 156912 . - 0 ID=cds-E3V42_03885;Parent=gene-E3V42_03885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163009.1;locus_tag=E3V42_03885;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 157108 157200 . + . ID=gene-E3V42_03890;Name=E3V42_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03890 SOQV01000040.1 Protein Homology CDS 157108 157200 . + 0 ID=cds-TMR84627.1;Parent=gene-E3V42_03890;Dbxref=NCBI_GP:TMR84627.1;Name=TMR84627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036030.1;locus_tag=E3V42_03890;product=D-fructose-6-phosphate amidotransferase;protein_id=TMR84627.1;transl_table=11 SOQV01000040.1 Genbank gene 157187 157600 . + . ID=gene-E3V42_03895;Name=E3V42_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03895 SOQV01000040.1 Protein Homology CDS 157187 157600 . + 0 ID=cds-TMR84628.1;Parent=gene-E3V42_03895;Dbxref=NCBI_GP:TMR84628.1;Name=TMR84628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=E3V42_03895;product=30S ribosomal protein S12;protein_id=TMR84628.1;transl_table=11 SOQV01000040.1 Genbank gene 157620 158090 . + . ID=gene-E3V42_03900;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=E3V42_03900 SOQV01000040.1 Protein Homology CDS 157620 158090 . + 0 ID=cds-TMR84629.1;Parent=gene-E3V42_03900;Dbxref=NCBI_GP:TMR84629.1;Name=TMR84629.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=E3V42_03900;product=30S ribosomal protein S7;protein_id=TMR84629.1;transl_table=11 SOQV01000040.1 Genbank gene 158369 160450 . + . ID=gene-E3V42_03905;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=E3V42_03905 SOQV01000040.1 Protein Homology CDS 158369 160450 . + 0 ID=cds-TMR84630.1;Parent=gene-E3V42_03905;Dbxref=NCBI_GP:TMR84630.1;Name=TMR84630.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357844.1;locus_tag=E3V42_03905;product=elongation factor G;protein_id=TMR84630.1;transl_table=11 SOQV01000040.1 Genbank gene 160554 164945 . + . ID=gene-E3V42_03910;Name=E3V42_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03910 SOQV01000040.1 Protein Homology CDS 160554 164945 . + 0 ID=cds-TMR84631.1;Parent=gene-E3V42_03910;Dbxref=NCBI_GP:TMR84631.1;Name=TMR84631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357845.1;locus_tag=E3V42_03910;product=PolC-type DNA polymerase III;protein_id=TMR84631.1;transl_table=11 SOQV01000040.1 Genbank gene 164983 165660 . + . ID=gene-E3V42_03915;Name=E3V42_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03915 SOQV01000040.1 Protein Homology CDS 164983 165660 . + 0 ID=cds-TMR84632.1;Parent=gene-E3V42_03915;Dbxref=NCBI_GP:TMR84632.1;Name=TMR84632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970260.1;locus_tag=E3V42_03915;product=hypothetical protein;protein_id=TMR84632.1;transl_table=11 SOQV01000040.1 Genbank gene 165674 165826 . + . ID=gene-E3V42_03920;Name=E3V42_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03920 SOQV01000040.1 Protein Homology CDS 165674 165826 . + 0 ID=cds-TMR84633.1;Parent=gene-E3V42_03920;Dbxref=NCBI_GP:TMR84633.1;Name=TMR84633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008869148.1;locus_tag=E3V42_03920;product=hypothetical protein;protein_id=TMR84633.1;transl_table=11 SOQV01000040.1 Genbank gene 165848 167089 . + . ID=gene-E3V42_03925;Name=E3V42_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03925 SOQV01000040.1 Protein Homology CDS 165848 167089 . + 0 ID=cds-TMR84634.1;Parent=gene-E3V42_03925;Dbxref=NCBI_GP:TMR84634.1;Name=TMR84634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445406.1;locus_tag=E3V42_03925;product=aminopeptidase;protein_id=TMR84634.1;transl_table=11 SOQV01000040.1 Genbank gene 167099 167329 . + . ID=gene-E3V42_03930;Name=E3V42_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03930 SOQV01000040.1 Protein Homology CDS 167099 167329 . + 0 ID=cds-TMR84635.1;Parent=gene-E3V42_03930;Dbxref=NCBI_GP:TMR84635.1;Name=TMR84635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357849.1;locus_tag=E3V42_03930;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TMR84635.1;transl_table=11 SOQV01000040.1 Genbank pseudogene 167350 167424 . + . ID=gene-E3V42_03935;Name=E3V42_03935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03935;pseudo=true SOQV01000040.1 Protein Homology CDS 167350 167424 . + 0 ID=cds-E3V42_03935;Parent=gene-E3V42_03935;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_03935;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000040.1 Genbank pseudogene 167444 167624 . + . ID=gene-E3V42_03940;Name=E3V42_03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_03940;pseudo=true SOQV01000040.1 Protein Homology CDS 167444 167624 . + 0 ID=cds-E3V42_03940;Parent=gene-E3V42_03940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=E3V42_03940;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000040.1 Genbank gene 167642 168364 . + . ID=gene-E3V42_03945;Name=E3V42_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03945 SOQV01000040.1 Protein Homology CDS 167642 168364 . + 0 ID=cds-TMR84636.1;Parent=gene-E3V42_03945;Dbxref=NCBI_GP:TMR84636.1;Name=TMR84636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445407.1;locus_tag=E3V42_03945;product=rRNA pseudouridine synthase;protein_id=TMR84636.1;transl_table=11 SOQV01000040.1 Genbank gene 168373 168504 . + . ID=gene-E3V42_03950;Name=E3V42_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03950 SOQV01000040.1 Protein Homology CDS 168373 168504 . + 0 ID=cds-TMR84652.1;Parent=gene-E3V42_03950;Dbxref=NCBI_GP:TMR84652.1;Name=TMR84652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357851.1;locus_tag=E3V42_03950;product=hypothetical protein;protein_id=TMR84652.1;transl_table=11 SOQV01000040.1 Genbank gene 168476 169810 . + . ID=gene-E3V42_03955;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=E3V42_03955 SOQV01000040.1 Protein Homology CDS 168476 169810 . + 0 ID=cds-TMR84637.1;Parent=gene-E3V42_03955;Dbxref=NCBI_GP:TMR84637.1;Name=TMR84637.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357852.1;locus_tag=E3V42_03955;product=aminopeptidase C;protein_id=TMR84637.1;transl_table=11 SOQV01000040.1 Genbank gene 169972 170883 . - . ID=gene-E3V42_03960;Name=E3V42_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03960 SOQV01000040.1 Protein Homology CDS 169972 170883 . - 0 ID=cds-TMR84638.1;Parent=gene-E3V42_03960;Dbxref=NCBI_GP:TMR84638.1;Name=TMR84638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357853.1;locus_tag=E3V42_03960;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=TMR84638.1;transl_table=11 SOQV01000040.1 Genbank gene 170907 171710 . - . ID=gene-E3V42_03965;Name=E3V42_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03965 SOQV01000040.1 Protein Homology CDS 170907 171710 . - 0 ID=cds-TMR84639.1;Parent=gene-E3V42_03965;Dbxref=NCBI_GP:TMR84639.1;Name=TMR84639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357854.1;locus_tag=E3V42_03965;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=TMR84639.1;transl_table=11 SOQV01000040.1 Genbank gene 171738 172727 . - . ID=gene-E3V42_03970;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=E3V42_03970 SOQV01000040.1 Protein Homology CDS 171738 172727 . - 0 ID=cds-TMR84653.1;Parent=gene-E3V42_03970;Dbxref=NCBI_GP:TMR84653.1;Name=TMR84653.1;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021981.1;locus_tag=E3V42_03970;product=PTS mannose transporter subunit IIAB;protein_id=TMR84653.1;transl_table=11 SOQV01000040.1 Genbank gene 172963 173982 . - . ID=gene-E3V42_03975;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=E3V42_03975 SOQV01000040.1 Protein Homology CDS 172963 173982 . - 0 ID=cds-TMR84640.1;Parent=gene-E3V42_03975;Dbxref=NCBI_GP:TMR84640.1;Name=TMR84640.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357856.1;locus_tag=E3V42_03975;product=alcohol dehydrogenase AdhP;protein_id=TMR84640.1;transl_table=11 SOQV01000040.1 Genbank gene 174187 174419 . + . ID=gene-E3V42_03980;Name=E3V42_03980;end_range=174419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03980;partial=true SOQV01000040.1 Protein Homology CDS 174187 174419 . + 0 ID=cds-TMR84641.1;Parent=gene-E3V42_03980;Dbxref=NCBI_GP:TMR84641.1;Name=TMR84641.1;end_range=174419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_03980;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR84641.1;transl_table=11 ##sequence-region SOQV01000041.1 1 202107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000041.1 Genbank region 1 202107 . + . ID=SOQV01000041.1:1..202107;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000041.1 Genbank gene 1 242 . - . ID=gene-E3V42_03985;Name=E3V42_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03985;partial=true;start_range=.,1 SOQV01000041.1 Protein Homology CDS 1 242 . - 0 ID=cds-TMR84227.1;Parent=gene-E3V42_03985;Dbxref=NCBI_GP:TMR84227.1;Name=TMR84227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_03985;partial=true;product=transposase;protein_id=TMR84227.1;start_range=.,1;transl_table=11 SOQV01000041.1 Genbank gene 335 526 . - . ID=gene-E3V42_03990;Name=E3V42_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03990 SOQV01000041.1 Protein Homology CDS 335 526 . - 0 ID=cds-TMR84228.1;Parent=gene-E3V42_03990;Dbxref=NCBI_GP:TMR84228.1;Name=TMR84228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003069.1;locus_tag=E3V42_03990;product=XRE family transcriptional regulator;protein_id=TMR84228.1;transl_table=11 SOQV01000041.1 Genbank gene 597 713 . - . ID=gene-E3V42_03995;Name=E3V42_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_03995 SOQV01000041.1 Protein Homology CDS 597 713 . - 0 ID=cds-TMR84229.1;Parent=gene-E3V42_03995;Dbxref=NCBI_GP:TMR84229.1;Name=TMR84229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11083.6;locus_tag=E3V42_03995;product=hypothetical protein;protein_id=TMR84229.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 684 922 . + . ID=gene-E3V42_04000;Name=E3V42_04000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04000;pseudo=true SOQV01000041.1 Protein Homology CDS 684 922 . + 0 ID=cds-E3V42_04000;Parent=gene-E3V42_04000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821945.1;locus_tag=E3V42_04000;product=transposase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank pseudogene 977 2247 . + . ID=gene-E3V42_04005;Name=E3V42_04005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04005;pseudo=true SOQV01000041.1 Protein Homology CDS 977 2247 . + 0 ID=cds-E3V42_04005;Parent=gene-E3V42_04005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842441.1;locus_tag=E3V42_04005;product=IS1380 family transposase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 2809 5145 . - . ID=gene-E3V42_04010;Name=E3V42_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04010 SOQV01000041.1 Protein Homology CDS 2809 5145 . - 0 ID=cds-TMR84409.1;Parent=gene-E3V42_04010;Dbxref=NCBI_GP:TMR84409.1;Name=TMR84409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359057.1;locus_tag=E3V42_04010;product=HAD family hydrolase;protein_id=TMR84409.1;transl_table=11 SOQV01000041.1 Genbank gene 5278 6027 . + . ID=gene-E3V42_04015;Name=E3V42_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04015 SOQV01000041.1 Protein Homology CDS 5278 6027 . + 0 ID=cds-TMR84230.1;Parent=gene-E3V42_04015;Dbxref=NCBI_GP:TMR84230.1;Name=TMR84230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500208.1;locus_tag=E3V42_04015;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=TMR84230.1;transl_table=11 SOQV01000041.1 Genbank gene 6320 6934 . - . ID=gene-E3V42_04020;Name=E3V42_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04020 SOQV01000041.1 Protein Homology CDS 6320 6934 . - 0 ID=cds-TMR84231.1;Parent=gene-E3V42_04020;Dbxref=NCBI_GP:TMR84231.1;Name=TMR84231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359059.1;locus_tag=E3V42_04020;product=CadD family cadmium resistance transporter;protein_id=TMR84231.1;transl_table=11 SOQV01000041.1 Genbank gene 7749 8018 . - . ID=gene-E3V42_04025;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=E3V42_04025 SOQV01000041.1 Protein Homology CDS 7749 8018 . - 0 ID=cds-TMR84232.1;Parent=gene-E3V42_04025;Dbxref=NCBI_GP:TMR84232.1;Name=TMR84232.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=E3V42_04025;product=30S ribosomal protein S15;protein_id=TMR84232.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 8471 8583 . + . ID=gene-E3V42_04030;Name=E3V42_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04030;pseudo=true SOQV01000041.1 Protein Homology CDS 8471 8583 . + 0 ID=cds-E3V42_04030;Parent=gene-E3V42_04030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445771.1;locus_tag=E3V42_04030;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank pseudogene 8723 8820 . + . ID=gene-E3V42_04035;Name=E3V42_04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04035;pseudo=true SOQV01000041.1 Protein Homology CDS 8723 8820 . + 0 ID=cds-E3V42_04035;Parent=gene-E3V42_04035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035512.1;locus_tag=E3V42_04035;product=AAA family ATPase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 8840 9061 . + . ID=gene-E3V42_04040;Name=E3V42_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04040 SOQV01000041.1 Protein Homology CDS 8840 9061 . + 0 ID=cds-TMR84233.1;Parent=gene-E3V42_04040;Dbxref=NCBI_GP:TMR84233.1;Name=TMR84233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422778.1;locus_tag=E3V42_04040;product=30S ribosomal protein S15;protein_id=TMR84233.1;transl_table=11 SOQV01000041.1 Genbank gene 9221 11164 . + . ID=gene-E3V42_04045;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=E3V42_04045 SOQV01000041.1 Protein Homology CDS 9221 11164 . + 0 ID=cds-TMR84234.1;Parent=gene-E3V42_04045;Dbxref=NCBI_GP:TMR84234.1;Name=TMR84234.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359065.2;locus_tag=E3V42_04045;product=threonine--tRNA ligase;protein_id=TMR84234.1;transl_table=11 SOQV01000041.1 Genbank gene 11211 12185 . - . ID=gene-E3V42_04050;Name=E3V42_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04050 SOQV01000041.1 Protein Homology CDS 11211 12185 . - 0 ID=cds-TMR84235.1;Parent=gene-E3V42_04050;Dbxref=NCBI_GP:TMR84235.1;Name=TMR84235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445767.1;locus_tag=E3V42_04050;product=HAMP domain-containing histidine kinase;protein_id=TMR84235.1;transl_table=11 SOQV01000041.1 Genbank gene 12178 12855 . - . ID=gene-E3V42_04055;Name=E3V42_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04055 SOQV01000041.1 Protein Homology CDS 12178 12855 . - 0 ID=cds-TMR84236.1;Parent=gene-E3V42_04055;Dbxref=NCBI_GP:TMR84236.1;Name=TMR84236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445766.1;locus_tag=E3V42_04055;product=response regulator transcription factor;protein_id=TMR84236.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 13010 14076 . + . ID=gene-E3V42_04060;Name=E3V42_04060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04060;pseudo=true SOQV01000041.1 Protein Homology CDS 13010 14076 . + 0 ID=cds-E3V42_04060;Parent=gene-E3V42_04060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359068.1;locus_tag=E3V42_04060;product=DUF2974 domain-containing protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 14285 14722 . - . ID=gene-E3V42_04065;Name=E3V42_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04065 SOQV01000041.1 Protein Homology CDS 14285 14722 . - 0 ID=cds-TMR84237.1;Parent=gene-E3V42_04065;Dbxref=NCBI_GP:TMR84237.1;Name=TMR84237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445764.1;locus_tag=E3V42_04065;product=Rrf2 family transcriptional regulator;protein_id=TMR84237.1;transl_table=11 SOQV01000041.1 Genbank gene 14798 15646 . - . ID=gene-E3V42_04070;Name=E3V42_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04070 SOQV01000041.1 Protein Homology CDS 14798 15646 . - 0 ID=cds-TMR84238.1;Parent=gene-E3V42_04070;Dbxref=NCBI_GP:TMR84238.1;Name=TMR84238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445763.1;locus_tag=E3V42_04070;product=metallophosphoesterase;protein_id=TMR84238.1;transl_table=11 SOQV01000041.1 Genbank gene 15752 16402 . + . ID=gene-E3V42_04075;Name=E3V42_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04075 SOQV01000041.1 Protein Homology CDS 15752 16402 . + 0 ID=cds-TMR84239.1;Parent=gene-E3V42_04075;Dbxref=NCBI_GP:TMR84239.1;Name=TMR84239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445762.1;locus_tag=E3V42_04075;product=metal-dependent transcriptional regulator;protein_id=TMR84239.1;transl_table=11 SOQV01000041.1 Genbank gene 16567 16986 . + . ID=gene-E3V42_04080;Name=E3V42_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04080 SOQV01000041.1 Protein Homology CDS 16567 16986 . + 0 ID=cds-TMR84240.1;Parent=gene-E3V42_04080;Dbxref=NCBI_GP:TMR84240.1;Name=TMR84240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445761.1;locus_tag=E3V42_04080;product=hypothetical protein;protein_id=TMR84240.1;transl_table=11 SOQV01000041.1 Genbank gene 17018 17461 . - . ID=gene-E3V42_04085;Name=E3V42_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04085 SOQV01000041.1 Protein Homology CDS 17018 17461 . - 0 ID=cds-TMR84241.1;Parent=gene-E3V42_04085;Dbxref=NCBI_GP:TMR84241.1;Name=TMR84241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445760.1;locus_tag=E3V42_04085;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TMR84241.1;transl_table=11 SOQV01000041.1 Genbank gene 17491 19713 . - . ID=gene-E3V42_04090;Name=E3V42_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04090 SOQV01000041.1 Protein Homology CDS 17491 19713 . - 0 ID=cds-TMR84242.1;Parent=gene-E3V42_04090;Dbxref=NCBI_GP:TMR84242.1;Name=TMR84242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359080.1;locus_tag=E3V42_04090;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=TMR84242.1;transl_table=11 SOQV01000041.1 Genbank gene 20641 21270 . + . ID=gene-E3V42_04095;Name=E3V42_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04095 SOQV01000041.1 Protein Homology CDS 20641 21270 . + 0 ID=cds-TMR84243.1;Parent=gene-E3V42_04095;Dbxref=NCBI_GP:TMR84243.1;Name=TMR84243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690864.1;locus_tag=E3V42_04095;product=MBL fold metallo-hydrolase;protein_id=TMR84243.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 21308 21379 . + . ID=gene-E3V42_04100;Name=E3V42_04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04100;pseudo=true SOQV01000041.1 Protein Homology CDS 21308 21379 . + 0 ID=cds-E3V42_04100;Parent=gene-E3V42_04100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_04100;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 21819 24572 . - . ID=gene-E3V42_04105;Name=E3V42_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04105 SOQV01000041.1 Protein Homology CDS 21819 24572 . - 0 ID=cds-TMR84244.1;Parent=gene-E3V42_04105;Dbxref=NCBI_GP:TMR84244.1;Name=TMR84244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038248.1;locus_tag=E3V42_04105;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR84244.1;transl_table=11 SOQV01000041.1 Genbank gene 25000 25623 . - . ID=gene-E3V42_04110;Name=E3V42_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04110 SOQV01000041.1 Protein Homology CDS 25000 25623 . - 0 ID=cds-TMR84245.1;Parent=gene-E3V42_04110;Dbxref=NCBI_GP:TMR84245.1;Name=TMR84245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081179.1;locus_tag=E3V42_04110;product=recombinase family protein;protein_id=TMR84245.1;transl_table=11 SOQV01000041.1 Genbank gene 25806 27698 . - . ID=gene-E3V42_04115;Name=E3V42_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04115 SOQV01000041.1 Protein Homology CDS 25806 27698 . - 0 ID=cds-TMR84246.1;Parent=gene-E3V42_04115;Dbxref=NCBI_GP:TMR84246.1;Name=TMR84246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359084.1;locus_tag=E3V42_04115;product=endopeptidase;protein_id=TMR84246.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 28069 29184 . + . ID=gene-E3V42_04120;Name=E3V42_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04120;pseudo=true SOQV01000041.1 Protein Homology CDS 28069 29184 . + 0 ID=cds-E3V42_04120;Parent=gene-E3V42_04120;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445755.1;locus_tag=E3V42_04120;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 29177 30370 . + . ID=gene-E3V42_04125;Name=E3V42_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04125 SOQV01000041.1 Protein Homology CDS 29177 30370 . + 0 ID=cds-TMR84247.1;Parent=gene-E3V42_04125;Dbxref=NCBI_GP:TMR84247.1;Name=TMR84247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445754.1;locus_tag=E3V42_04125;product=MFS transporter;protein_id=TMR84247.1;transl_table=11 SOQV01000041.1 Genbank gene 30843 31565 . + . ID=gene-E3V42_04130;Name=E3V42_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04130 SOQV01000041.1 Protein Homology CDS 30843 31565 . + 0 ID=cds-TMR84248.1;Parent=gene-E3V42_04130;Dbxref=NCBI_GP:TMR84248.1;Name=TMR84248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445753.1;locus_tag=E3V42_04130;product=metal ABC transporter ATP-binding protein;protein_id=TMR84248.1;transl_table=11 SOQV01000041.1 Genbank gene 31562 32410 . + . ID=gene-E3V42_04135;Name=E3V42_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04135 SOQV01000041.1 Protein Homology CDS 31562 32410 . + 0 ID=cds-TMR84249.1;Parent=gene-E3V42_04135;Dbxref=NCBI_GP:TMR84249.1;Name=TMR84249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359086.1;locus_tag=E3V42_04135;product=metal ABC transporter permease;protein_id=TMR84249.1;transl_table=11 SOQV01000041.1 Genbank gene 32442 33371 . + . ID=gene-E3V42_04140;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=E3V42_04140 SOQV01000041.1 Protein Homology CDS 32442 33371 . + 0 ID=cds-TMR84250.1;Parent=gene-E3V42_04140;Dbxref=NCBI_GP:TMR84250.1;Name=TMR84250.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359087.1;locus_tag=E3V42_04140;product=metal ABC transporter substrate-binding lipoprotein/adhesin PsaA;protein_id=TMR84250.1;transl_table=11 SOQV01000041.1 Genbank gene 33494 33985 . + . ID=gene-E3V42_04145;Name=E3V42_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04145 SOQV01000041.1 Protein Homology CDS 33494 33985 . + 0 ID=cds-TMR84251.1;Parent=gene-E3V42_04145;Dbxref=NCBI_GP:TMR84251.1;Name=TMR84251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359088.2;locus_tag=E3V42_04145;product=thiol peroxidase;protein_id=TMR84251.1;transl_table=11 SOQV01000041.1 Genbank gene 34050 34169 . + . ID=gene-E3V42_04150;Name=E3V42_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04150 SOQV01000041.1 Protein Homology CDS 34050 34169 . + 0 ID=cds-TMR84410.1;Parent=gene-E3V42_04150;Dbxref=NCBI_GP:TMR84410.1;Name=TMR84410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_04150;product=DNA alkylation repair protein;protein_id=TMR84410.1;transl_table=11 SOQV01000041.1 Genbank gene 34195 36903 . - . ID=gene-E3V42_04155;Name=E3V42_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04155 SOQV01000041.1 Protein Homology CDS 34195 36903 . - 0 ID=cds-TMR84252.1;Parent=gene-E3V42_04155;Dbxref=NCBI_GP:TMR84252.1;Name=TMR84252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445749.1;locus_tag=E3V42_04155;product=FtsX-like permease family protein;protein_id=TMR84252.1;transl_table=11 SOQV01000041.1 Genbank gene 36905 37606 . - . ID=gene-E3V42_04160;Name=E3V42_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04160 SOQV01000041.1 Protein Homology CDS 36905 37606 . - 0 ID=cds-TMR84253.1;Parent=gene-E3V42_04160;Dbxref=NCBI_GP:TMR84253.1;Name=TMR84253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445748.1;locus_tag=E3V42_04160;product=ABC transporter ATP-binding protein;protein_id=TMR84253.1;transl_table=11 SOQV01000041.1 Genbank gene 37725 38417 . - . ID=gene-E3V42_04165;Name=E3V42_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04165 SOQV01000041.1 Protein Homology CDS 37725 38417 . - 0 ID=cds-TMR84254.1;Parent=gene-E3V42_04165;Dbxref=NCBI_GP:TMR84254.1;Name=TMR84254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359092.1;locus_tag=E3V42_04165;product=phosphoglycerate mutase;protein_id=TMR84254.1;transl_table=11 SOQV01000041.1 Genbank gene 38563 41355 . - . ID=gene-E3V42_04170;Name=E3V42_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04170 SOQV01000041.1 Protein Homology CDS 38563 41355 . - 0 ID=cds-TMR84255.1;Parent=gene-E3V42_04170;Dbxref=NCBI_GP:TMR84255.1;Name=TMR84255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359095.1;locus_tag=E3V42_04170;product=isoleucine--tRNA ligase;protein_id=TMR84255.1;transl_table=11 SOQV01000041.1 Genbank gene 41499 41660 . - . ID=gene-E3V42_04175;Name=E3V42_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04175 SOQV01000041.1 Protein Homology CDS 41499 41660 . - 0 ID=cds-TMR84256.1;Parent=gene-E3V42_04175;Dbxref=NCBI_GP:TMR84256.1;Name=TMR84256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359096.1;locus_tag=E3V42_04175;product=hypothetical protein;protein_id=TMR84256.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 41703 42501 . - . ID=gene-E3V42_04180;Name=E3V42_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04180;pseudo=true SOQV01000041.1 Protein Homology CDS 41703 42501 . - 0 ID=cds-E3V42_04180;Parent=gene-E3V42_04180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359098.1;locus_tag=E3V42_04180;product=DivIVA domain-containing protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 42498 43349 . - . ID=gene-E3V42_04185;Name=E3V42_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04185 SOQV01000041.1 Protein Homology CDS 42498 43349 . - 0 ID=cds-TMR84257.1;Parent=gene-E3V42_04185;Dbxref=NCBI_GP:TMR84257.1;Name=TMR84257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359099.1;locus_tag=E3V42_04185;product=RNA-binding protein;protein_id=TMR84257.1;transl_table=11 SOQV01000041.1 Genbank gene 43280 43543 . - . ID=gene-E3V42_04190;Name=E3V42_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04190 SOQV01000041.1 Protein Homology CDS 43280 43543 . - 0 ID=cds-TMR84258.1;Parent=gene-E3V42_04190;Dbxref=NCBI_GP:TMR84258.1;Name=TMR84258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359100.1;locus_tag=E3V42_04190;product=YggT family protein;protein_id=TMR84258.1;transl_table=11 SOQV01000041.1 Genbank gene 43543 44082 . - . ID=gene-E3V42_04195;Name=E3V42_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04195 SOQV01000041.1 Protein Homology CDS 43543 44082 . - 0 ID=cds-TMR84259.1;Parent=gene-E3V42_04195;Dbxref=NCBI_GP:TMR84259.1;Name=TMR84259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359101.1;locus_tag=E3V42_04195;product=cell division protein SepF;protein_id=TMR84259.1;transl_table=11 SOQV01000041.1 Genbank gene 44092 44763 . - . ID=gene-E3V42_04200;Name=E3V42_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04200 SOQV01000041.1 Protein Homology CDS 44092 44763 . - 0 ID=cds-TMR84260.1;Parent=gene-E3V42_04200;Dbxref=NCBI_GP:TMR84260.1;Name=TMR84260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359102.1;locus_tag=E3V42_04200;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=TMR84260.1;transl_table=11 SOQV01000041.1 Genbank gene 44768 46027 . - . ID=gene-E3V42_04205;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=E3V42_04205 SOQV01000041.1 Protein Homology CDS 44768 46027 . - 0 ID=cds-TMR84261.1;Parent=gene-E3V42_04205;Dbxref=NCBI_GP:TMR84261.1;Name=TMR84261.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359103.1;locus_tag=E3V42_04205;product=cell division protein FtsZ;protein_id=TMR84261.1;transl_table=11 SOQV01000041.1 Genbank gene 46044 47417 . - . ID=gene-E3V42_04210;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=E3V42_04210 SOQV01000041.1 Protein Homology CDS 46044 47417 . - 0 ID=cds-TMR84262.1;Parent=gene-E3V42_04210;Dbxref=NCBI_GP:TMR84262.1;Name=TMR84262.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359104.1;locus_tag=E3V42_04210;product=cell division protein FtsA;protein_id=TMR84262.1;transl_table=11 SOQV01000041.1 Genbank gene 47636 48340 . - . ID=gene-E3V42_04215;Name=E3V42_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04215 SOQV01000041.1 Protein Homology CDS 47636 48340 . - 0 ID=cds-TMR84263.1;Parent=gene-E3V42_04215;Dbxref=NCBI_GP:TMR84263.1;Name=TMR84263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359105.1;locus_tag=E3V42_04215;product=TIGR02206 family membrane protein;protein_id=TMR84263.1;transl_table=11 SOQV01000041.1 Genbank gene 48431 49042 . - . ID=gene-E3V42_04220;Name=E3V42_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04220 SOQV01000041.1 Protein Homology CDS 48431 49042 . - 0 ID=cds-TMR84264.1;Parent=gene-E3V42_04220;Dbxref=NCBI_GP:TMR84264.1;Name=TMR84264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359106.1;locus_tag=E3V42_04220;product=NUDIX domain-containing protein;protein_id=TMR84264.1;transl_table=11 SOQV01000041.1 Genbank gene 49029 50402 . - . ID=gene-E3V42_04225;Name=E3V42_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04225 SOQV01000041.1 Protein Homology CDS 49029 50402 . - 0 ID=cds-TMR84265.1;Parent=gene-E3V42_04225;Dbxref=NCBI_GP:TMR84265.1;Name=TMR84265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445733.1;locus_tag=E3V42_04225;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TMR84265.1;transl_table=11 SOQV01000041.1 Genbank gene 50486 51529 . - . ID=gene-E3V42_04230;Name=E3V42_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04230 SOQV01000041.1 Protein Homology CDS 50486 51529 . - 0 ID=cds-TMR84266.1;Parent=gene-E3V42_04230;Dbxref=NCBI_GP:TMR84266.1;Name=TMR84266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445732.1;locus_tag=E3V42_04230;product=D-alanine--D-alanine ligase;protein_id=TMR84266.1;transl_table=11 SOQV01000041.1 Genbank gene 51705 52301 . - . ID=gene-E3V42_04235;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=E3V42_04235 SOQV01000041.1 Protein Homology CDS 51705 52301 . - 0 ID=cds-TMR84267.1;Parent=gene-E3V42_04235;Dbxref=NCBI_GP:TMR84267.1;Name=TMR84267.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=E3V42_04235;product=recombination protein RecR;protein_id=TMR84267.1;transl_table=11 SOQV01000041.1 Genbank gene 52312 54369 . - . ID=gene-E3V42_04240;Name=E3V42_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04240 SOQV01000041.1 Protein Homology CDS 52312 54369 . - 0 ID=cds-TMR84268.1;Parent=gene-E3V42_04240;Dbxref=NCBI_GP:TMR84268.1;Name=TMR84268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359110.1;locus_tag=E3V42_04240;product=penicillin-binding protein 2;protein_id=TMR84268.1;transl_table=11 SOQV01000041.1 Genbank gene 54673 55524 . + . ID=gene-E3V42_04245;Name=E3V42_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04245 SOQV01000041.1 Protein Homology CDS 54673 55524 . + 0 ID=cds-TMR84269.1;Parent=gene-E3V42_04245;Dbxref=NCBI_GP:TMR84269.1;Name=TMR84269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359111.1;locus_tag=E3V42_04245;product=MurR/RpiR family transcriptional regulator;protein_id=TMR84269.1;transl_table=11 SOQV01000041.1 Genbank gene 55586 55936 . - . ID=gene-E3V42_04250;Name=E3V42_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04250 SOQV01000041.1 Protein Homology CDS 55586 55936 . - 0 ID=cds-TMR84270.1;Parent=gene-E3V42_04250;Dbxref=NCBI_GP:TMR84270.1;Name=TMR84270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445728.1;locus_tag=E3V42_04250;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;protein_id=TMR84270.1;transl_table=11 SOQV01000041.1 Genbank gene 55926 56213 . - . ID=gene-E3V42_04255;Name=E3V42_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04255 SOQV01000041.1 Protein Homology CDS 55926 56213 . - 0 ID=cds-TMR84271.1;Parent=gene-E3V42_04255;Dbxref=NCBI_GP:TMR84271.1;Name=TMR84271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445727.1;locus_tag=E3V42_04255;product=hypothetical protein;protein_id=TMR84271.1;transl_table=11 SOQV01000041.1 Genbank gene 56310 57194 . - . ID=gene-E3V42_04260;Name=E3V42_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04260 SOQV01000041.1 Protein Homology CDS 56310 57194 . - 0 ID=cds-TMR84272.1;Parent=gene-E3V42_04260;Dbxref=NCBI_GP:TMR84272.1;Name=TMR84272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359112.1;locus_tag=E3V42_04260;product=ROK family protein;protein_id=TMR84272.1;transl_table=11 SOQV01000041.1 Genbank gene 57212 58129 . - . ID=gene-E3V42_04265;Name=E3V42_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04265 SOQV01000041.1 Protein Homology CDS 57212 58129 . - 0 ID=cds-TMR84273.1;Parent=gene-E3V42_04265;Dbxref=NCBI_GP:TMR84273.1;Name=TMR84273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445725.1;locus_tag=E3V42_04265;product=N-acetylneuraminate lyase;protein_id=TMR84273.1;transl_table=11 SOQV01000041.1 Genbank gene 58299 58943 . - . ID=gene-E3V42_04270;Name=E3V42_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04270 SOQV01000041.1 Protein Homology CDS 58299 58943 . - 0 ID=cds-TMR84274.1;Parent=gene-E3V42_04270;Dbxref=NCBI_GP:TMR84274.1;Name=TMR84274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445724.1;locus_tag=E3V42_04270;product=DUF624 domain-containing protein;protein_id=TMR84274.1;transl_table=11 SOQV01000041.1 Genbank gene 59026 59241 . - . ID=gene-E3V42_04275;Name=E3V42_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04275 SOQV01000041.1 Protein Homology CDS 59026 59241 . - 0 ID=cds-TMR84275.1;Parent=gene-E3V42_04275;Dbxref=NCBI_GP:TMR84275.1;Name=TMR84275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002205130.1;locus_tag=E3V42_04275;product=hypothetical protein;protein_id=TMR84275.1;transl_table=11 SOQV01000041.1 Genbank gene 59251 59595 . - . ID=gene-E3V42_04280;Name=E3V42_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04280 SOQV01000041.1 Protein Homology CDS 59251 59595 . - 0 ID=cds-TMR84411.1;Parent=gene-E3V42_04280;Dbxref=NCBI_GP:TMR84411.1;Name=TMR84411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359116.1;locus_tag=E3V42_04280;product=hypothetical protein;protein_id=TMR84411.1;transl_table=11 SOQV01000041.1 Genbank gene 59922 60374 . - . ID=gene-E3V42_04285;Name=E3V42_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04285 SOQV01000041.1 Protein Homology CDS 59922 60374 . - 0 ID=cds-TMR84276.1;Parent=gene-E3V42_04285;Dbxref=NCBI_GP:TMR84276.1;Name=TMR84276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359117.1;locus_tag=E3V42_04285;product=DUF386 family protein;protein_id=TMR84276.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 60532 60627 . - . ID=gene-E3V42_04290;Name=E3V42_04290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04290;pseudo=true SOQV01000041.1 Protein Homology CDS 60532 60627 . - 0 ID=cds-E3V42_04290;Parent=gene-E3V42_04290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_04290;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 60602 61441 . - . ID=gene-E3V42_04295;Name=E3V42_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04295 SOQV01000041.1 Protein Homology CDS 60602 61441 . - 0 ID=cds-TMR84277.1;Parent=gene-E3V42_04295;Dbxref=NCBI_GP:TMR84277.1;Name=TMR84277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359118.1;locus_tag=E3V42_04295;product=carbohydrate ABC transporter permease;protein_id=TMR84277.1;transl_table=11 SOQV01000041.1 Genbank gene 61457 62353 . - . ID=gene-E3V42_04300;Name=E3V42_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04300 SOQV01000041.1 Protein Homology CDS 61457 62353 . - 0 ID=cds-TMR84278.1;Parent=gene-E3V42_04300;Dbxref=NCBI_GP:TMR84278.1;Name=TMR84278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359119.1;locus_tag=E3V42_04300;product=sugar ABC transporter permease;protein_id=TMR84278.1;transl_table=11 SOQV01000041.1 Genbank gene 62575 63903 . - . ID=gene-E3V42_04305;Name=E3V42_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04305 SOQV01000041.1 Protein Homology CDS 62575 63903 . - 0 ID=cds-TMR84279.1;Parent=gene-E3V42_04305;Dbxref=NCBI_GP:TMR84279.1;Name=TMR84279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359120.1;locus_tag=E3V42_04305;product=carbohydrate ABC transporter substrate-binding protein;protein_id=TMR84279.1;transl_table=11 SOQV01000041.1 Genbank gene 64027 65508 . - . ID=gene-E3V42_04310;Name=E3V42_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04310 SOQV01000041.1 Protein Homology CDS 64027 65508 . - 0 ID=cds-TMR84280.1;Parent=gene-E3V42_04310;Dbxref=NCBI_GP:TMR84280.1;Name=TMR84280.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834377.1;locus_tag=E3V42_04310;product=PTS glucose transporter subunit IIBC;protein_id=TMR84280.1;transl_table=11 SOQV01000041.1 Genbank gene 65564 66262 . - . ID=gene-E3V42_04315;Name=E3V42_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04315 SOQV01000041.1 Protein Homology CDS 65564 66262 . - 0 ID=cds-TMR84281.1;Parent=gene-E3V42_04315;Dbxref=NCBI_GP:TMR84281.1;Name=TMR84281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359122.1;locus_tag=E3V42_04315;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TMR84281.1;transl_table=11 SOQV01000041.1 Genbank gene 66442 67545 . - . ID=gene-E3V42_04320;Name=E3V42_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04320 SOQV01000041.1 Protein Homology CDS 66442 67545 . - 0 ID=cds-TMR84282.1;Parent=gene-E3V42_04320;Dbxref=NCBI_GP:TMR84282.1;Name=TMR84282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241740.1;locus_tag=E3V42_04320;product=Gfo/Idh/MocA family oxidoreductase;protein_id=TMR84282.1;transl_table=11 SOQV01000041.1 Genbank gene 67558 69651 . - . ID=gene-E3V42_04325;Name=nanB;gbkey=Gene;gene=nanB;gene_biotype=protein_coding;locus_tag=E3V42_04325 SOQV01000041.1 Protein Homology CDS 67558 69651 . - 0 ID=cds-TMR84283.1;Parent=gene-E3V42_04325;Dbxref=NCBI_GP:TMR84283.1;Name=TMR84283.1;gbkey=CDS;gene=nanB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359124.1;locus_tag=E3V42_04325;product=neuraminidase NanB;protein_id=TMR84283.1;transl_table=11 SOQV01000041.1 Genbank gene 69669 70502 . - . ID=gene-E3V42_04330;Name=E3V42_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04330 SOQV01000041.1 Protein Homology CDS 69669 70502 . - 0 ID=cds-TMR84284.1;Parent=gene-E3V42_04330;Dbxref=NCBI_GP:TMR84284.1;Name=TMR84284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359125.1;locus_tag=E3V42_04330;product=carbohydrate ABC transporter permease;protein_id=TMR84284.1;transl_table=11 SOQV01000041.1 Genbank gene 70502 71386 . - . ID=gene-E3V42_04335;Name=E3V42_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04335 SOQV01000041.1 Protein Homology CDS 70502 71386 . - 0 ID=cds-TMR84285.1;Parent=gene-E3V42_04335;Dbxref=NCBI_GP:TMR84285.1;Name=TMR84285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359126.1;locus_tag=E3V42_04335;product=sugar ABC transporter permease;protein_id=TMR84285.1;transl_table=11 SOQV01000041.1 Genbank gene 71465 72802 . - . ID=gene-E3V42_04340;Name=E3V42_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04340 SOQV01000041.1 Protein Homology CDS 71465 72802 . - 0 ID=cds-TMR84286.1;Parent=gene-E3V42_04340;Dbxref=NCBI_GP:TMR84286.1;Name=TMR84286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359127.1;locus_tag=E3V42_04340;product=sugar ABC transporter substrate-binding protein;protein_id=TMR84286.1;transl_table=11 SOQV01000041.1 Genbank gene 72821 73273 . - . ID=gene-E3V42_04345;Name=E3V42_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04345 SOQV01000041.1 Protein Homology CDS 72821 73273 . - 0 ID=cds-TMR84287.1;Parent=gene-E3V42_04345;Dbxref=NCBI_GP:TMR84287.1;Name=TMR84287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359128.1;locus_tag=E3V42_04345;product=YhcH/YjgK/YiaL family protein;protein_id=TMR84287.1;transl_table=11 SOQV01000041.1 Genbank gene 74568 75542 . - . ID=gene-E3V42_04350;Name=E3V42_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04350 SOQV01000041.1 Protein Homology CDS 74568 75542 . - 0 ID=cds-TMR84288.1;Parent=gene-E3V42_04350;Dbxref=NCBI_GP:TMR84288.1;Name=TMR84288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=E3V42_04350;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=TMR84288.1;transl_table=11 SOQV01000041.1 Genbank gene 75831 79442 . - . ID=gene-E3V42_04355;Name=E3V42_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04355 SOQV01000041.1 Protein Homology CDS 75831 79442 . - 0 ID=cds-TMR84289.1;Parent=gene-E3V42_04355;Dbxref=NCBI_GP:TMR84289.1;Name=TMR84289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284821.1;locus_tag=E3V42_04355;product=trypsin-like serine protease;protein_id=TMR84289.1;transl_table=11 SOQV01000041.1 Genbank gene 79470 79688 . - . ID=gene-E3V42_04360;Name=E3V42_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04360 SOQV01000041.1 Protein Homology CDS 79470 79688 . - 0 ID=cds-TMR84290.1;Parent=gene-E3V42_04360;Dbxref=NCBI_GP:TMR84290.1;Name=TMR84290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772509.1;locus_tag=E3V42_04360;product=hypothetical protein;protein_id=TMR84290.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 80441 83873 . - . ID=gene-E3V42_04365;Name=E3V42_04365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04365;pseudo=true SOQV01000041.1 Protein Homology CDS 80441 83873 . - 0 ID=cds-E3V42_04365;Parent=gene-E3V42_04365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012636588.1;locus_tag=E3V42_04365;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 84162 84389 . - . ID=gene-E3V42_04370;Name=E3V42_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04370 SOQV01000041.1 Protein Homology CDS 84162 84389 . - 0 ID=cds-TMR84291.1;Parent=gene-E3V42_04370;Dbxref=NCBI_GP:TMR84291.1;Name=TMR84291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359130.1;locus_tag=E3V42_04370;product=hypothetical protein;protein_id=TMR84291.1;transl_table=11 SOQV01000041.1 Genbank gene 85047 86027 . - . ID=gene-E3V42_04375;Name=E3V42_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04375 SOQV01000041.1 Protein Homology CDS 85047 86027 . - 0 ID=cds-TMR84292.1;Parent=gene-E3V42_04375;Dbxref=NCBI_GP:TMR84292.1;Name=TMR84292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359131.1;locus_tag=E3V42_04375;product=acetylxylan esterase;protein_id=TMR84292.1;transl_table=11 SOQV01000041.1 Genbank gene 86200 86307 . - . ID=gene-E3V42_04380;Name=E3V42_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04380 SOQV01000041.1 Protein Homology CDS 86200 86307 . - 0 ID=cds-TMR84293.1;Parent=gene-E3V42_04380;Dbxref=NCBI_GP:TMR84293.1;Name=TMR84293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809715.1;locus_tag=E3V42_04380;product=alanine racemase;protein_id=TMR84293.1;transl_table=11 SOQV01000041.1 Genbank gene 86344 88359 . - . ID=gene-E3V42_04385;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=E3V42_04385 SOQV01000041.1 Protein Homology CDS 86344 88359 . - 0 ID=cds-TMR84294.1;Parent=gene-E3V42_04385;Dbxref=NCBI_GP:TMR84294.1;Name=TMR84294.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359132.1;locus_tag=E3V42_04385;product=ATP-dependent DNA helicase RecG;protein_id=TMR84294.1;transl_table=11 SOQV01000041.1 Genbank gene 88378 89481 . - . ID=gene-E3V42_04390;Name=E3V42_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04390 SOQV01000041.1 Protein Homology CDS 88378 89481 . - 0 ID=cds-TMR84295.1;Parent=gene-E3V42_04390;Dbxref=NCBI_GP:TMR84295.1;Name=TMR84295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648056.1;locus_tag=E3V42_04390;product=alanine racemase;protein_id=TMR84295.1;transl_table=11 SOQV01000041.1 Genbank gene 89471 89839 . - . ID=gene-E3V42_04395;Name=E3V42_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04395 SOQV01000041.1 Protein Homology CDS 89471 89839 . - 0 ID=cds-TMR84296.1;Parent=gene-E3V42_04395;Dbxref=NCBI_GP:TMR84296.1;Name=TMR84296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445709.1;locus_tag=E3V42_04395;product=holo-ACP synthase;protein_id=TMR84296.1;transl_table=11 SOQV01000041.1 Genbank gene 89878 90909 . - . ID=gene-E3V42_04400;Name=E3V42_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04400 SOQV01000041.1 Protein Homology CDS 89878 90909 . - 0 ID=cds-TMR84297.1;Parent=gene-E3V42_04400;Dbxref=NCBI_GP:TMR84297.1;Name=TMR84297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359135.1;locus_tag=E3V42_04400;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TMR84297.1;transl_table=11 SOQV01000041.1 Genbank gene 90911 91942 . - . ID=gene-E3V42_04405;Name=E3V42_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04405 SOQV01000041.1 Protein Homology CDS 90911 91942 . - 0 ID=cds-TMR84298.1;Parent=gene-E3V42_04405;Dbxref=NCBI_GP:TMR84298.1;Name=TMR84298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359136.1;locus_tag=E3V42_04405;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TMR84298.1;transl_table=11 SOQV01000041.1 Genbank gene 92023 94536 . - . ID=gene-E3V42_04410;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=E3V42_04410 SOQV01000041.1 Protein Homology CDS 92023 94536 . - 0 ID=cds-TMR84299.1;Parent=gene-E3V42_04410;Dbxref=NCBI_GP:TMR84299.1;Name=TMR84299.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359137.1;locus_tag=E3V42_04410;product=preprotein translocase subunit SecA;protein_id=TMR84299.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 94682 94968 . - . ID=gene-E3V42_04415;Name=E3V42_04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04415;pseudo=true SOQV01000041.1 Protein Homology CDS 94682 94968 . - 0 ID=cds-E3V42_04415;Parent=gene-E3V42_04415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940701.1;locus_tag=E3V42_04415;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 94979 95629 . - . ID=gene-E3V42_04420;Name=E3V42_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04420 SOQV01000041.1 Protein Homology CDS 94979 95629 . - 0 ID=cds-TMR84300.1;Parent=gene-E3V42_04420;Dbxref=NCBI_GP:TMR84300.1;Name=TMR84300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359139.1;locus_tag=E3V42_04420;product=ABC transporter ATP-binding protein;protein_id=TMR84300.1;transl_table=11 SOQV01000041.1 Genbank gene 95633 96310 . - . ID=gene-E3V42_04425;Name=E3V42_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04425 SOQV01000041.1 Protein Homology CDS 95633 96310 . - 0 ID=cds-TMR84301.1;Parent=gene-E3V42_04425;Dbxref=NCBI_GP:TMR84301.1;Name=TMR84301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359140.1;locus_tag=E3V42_04425;product=hypothetical protein;protein_id=TMR84301.1;transl_table=11 SOQV01000041.1 Genbank gene 96267 97058 . - . ID=gene-E3V42_04430;Name=E3V42_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04430 SOQV01000041.1 Protein Homology CDS 96267 97058 . - 0 ID=cds-TMR84302.1;Parent=gene-E3V42_04430;Dbxref=NCBI_GP:TMR84302.1;Name=TMR84302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359141.1;locus_tag=E3V42_04430;product=hypothetical protein;protein_id=TMR84302.1;transl_table=11 SOQV01000041.1 Genbank gene 97090 97425 . - . ID=gene-E3V42_04435;Name=E3V42_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04435 SOQV01000041.1 Protein Homology CDS 97090 97425 . - 0 ID=cds-TMR84303.1;Parent=gene-E3V42_04435;Dbxref=NCBI_GP:TMR84303.1;Name=TMR84303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445704.1;locus_tag=E3V42_04435;product=hypothetical protein;protein_id=TMR84303.1;transl_table=11 SOQV01000041.1 Genbank gene 97506 98816 . - . ID=gene-E3V42_04440;Name=E3V42_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04440 SOQV01000041.1 Protein Homology CDS 97506 98816 . - 0 ID=cds-TMR84304.1;Parent=gene-E3V42_04440;Dbxref=NCBI_GP:TMR84304.1;Name=TMR84304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=E3V42_04440;product=ribosome biogenesis GTPase Der;protein_id=TMR84304.1;transl_table=11 SOQV01000041.1 Genbank gene 98830 99543 . - . ID=gene-E3V42_04445;Name=E3V42_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04445 SOQV01000041.1 Protein Homology CDS 98830 99543 . - 0 ID=cds-TMR84305.1;Parent=gene-E3V42_04445;Dbxref=NCBI_GP:TMR84305.1;Name=TMR84305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359147.1;locus_tag=E3V42_04445;product=NADPH-dependent oxidoreductase;protein_id=TMR84305.1;transl_table=11 SOQV01000041.1 Genbank gene 99540 100436 . - . ID=gene-E3V42_04450;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=E3V42_04450 SOQV01000041.1 Protein Homology CDS 99540 100436 . - 0 ID=cds-TMR84306.1;Parent=gene-E3V42_04450;Dbxref=NCBI_GP:TMR84306.1;Name=TMR84306.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445701.1;locus_tag=E3V42_04450;product=primosomal protein DnaI;protein_id=TMR84306.1;transl_table=11 SOQV01000041.1 Genbank gene 100437 101606 . - . ID=gene-E3V42_04455;Name=E3V42_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04455 SOQV01000041.1 Protein Homology CDS 100437 101606 . - 0 ID=cds-TMR84307.1;Parent=gene-E3V42_04455;Dbxref=NCBI_GP:TMR84307.1;Name=TMR84307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445700.1;locus_tag=E3V42_04455;product=DNA helicase;protein_id=TMR84307.1;transl_table=11 SOQV01000041.1 Genbank gene 101607 102080 . - . ID=gene-E3V42_04460;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=E3V42_04460 SOQV01000041.1 Protein Homology CDS 101607 102080 . - 0 ID=cds-TMR84308.1;Parent=gene-E3V42_04460;Dbxref=NCBI_GP:TMR84308.1;Name=TMR84308.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359150.2;locus_tag=E3V42_04460;product=transcriptional repressor NrdR;protein_id=TMR84308.1;transl_table=11 SOQV01000041.1 Genbank gene 102220 102585 . + . ID=gene-E3V42_04465;Name=E3V42_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04465 SOQV01000041.1 Protein Homology CDS 102220 102585 . + 0 ID=cds-TMR84309.1;Parent=gene-E3V42_04465;Dbxref=NCBI_GP:TMR84309.1;Name=TMR84309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445698.1;locus_tag=E3V42_04465;product=GntR family transcriptional regulator;protein_id=TMR84309.1;transl_table=11 SOQV01000041.1 Genbank gene 102590 103285 . + . ID=gene-E3V42_04470;Name=E3V42_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04470 SOQV01000041.1 Protein Homology CDS 102590 103285 . + 0 ID=cds-TMR84310.1;Parent=gene-E3V42_04470;Dbxref=NCBI_GP:TMR84310.1;Name=TMR84310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445697.1;locus_tag=E3V42_04470;product=ABC transporter ATP-binding protein;protein_id=TMR84310.1;transl_table=11 SOQV01000041.1 Genbank gene 103221 104069 . + . ID=gene-E3V42_04475;Name=E3V42_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04475 SOQV01000041.1 Protein Homology CDS 103221 104069 . + 0 ID=cds-TMR84311.1;Parent=gene-E3V42_04475;Dbxref=NCBI_GP:TMR84311.1;Name=TMR84311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359153.1;locus_tag=E3V42_04475;product=hypothetical protein;protein_id=TMR84311.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 104321 104569 . + . ID=gene-E3V42_04480;Name=E3V42_04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04480;pseudo=true SOQV01000041.1 Protein Homology CDS 104321 104569 . + 0 ID=cds-E3V42_04480;Parent=gene-E3V42_04480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179432.1;locus_tag=E3V42_04480;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 104834 105598 . - . ID=gene-E3V42_04485;Name=E3V42_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04485 SOQV01000041.1 Protein Homology CDS 104834 105598 . - 0 ID=cds-TMR84312.1;Parent=gene-E3V42_04485;Dbxref=NCBI_GP:TMR84312.1;Name=TMR84312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863667.1;locus_tag=E3V42_04485;product=ABC transporter permease;protein_id=TMR84312.1;transl_table=11 SOQV01000041.1 Genbank gene 105591 106361 . - . ID=gene-E3V42_04490;Name=E3V42_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04490 SOQV01000041.1 Protein Homology CDS 105591 106361 . - 0 ID=cds-TMR84313.1;Parent=gene-E3V42_04490;Dbxref=NCBI_GP:TMR84313.1;Name=TMR84313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966490.1;locus_tag=E3V42_04490;product=ABC transporter ATP-binding protein;protein_id=TMR84313.1;transl_table=11 SOQV01000041.1 Genbank gene 106331 107443 . - . ID=gene-E3V42_04495;Name=E3V42_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04495 SOQV01000041.1 Protein Homology CDS 106331 107443 . - 0 ID=cds-TMR84314.1;Parent=gene-E3V42_04495;Dbxref=NCBI_GP:TMR84314.1;Name=TMR84314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399294.1;locus_tag=E3V42_04495;product=ThiF family adenylyltransferase;protein_id=TMR84314.1;transl_table=11 SOQV01000041.1 Genbank gene 107711 108388 . + . ID=gene-E3V42_04500;Name=E3V42_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04500 SOQV01000041.1 Protein Homology CDS 107711 108388 . + 0 ID=cds-TMR84315.1;Parent=gene-E3V42_04500;Dbxref=NCBI_GP:TMR84315.1;Name=TMR84315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433071.1;locus_tag=E3V42_04500;product=transcriptional regulator;protein_id=TMR84315.1;transl_table=11 SOQV01000041.1 Genbank gene 108449 110245 . - . ID=gene-E3V42_04505;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=E3V42_04505 SOQV01000041.1 Protein Homology CDS 108449 110245 . - 0 ID=cds-TMR84316.1;Parent=gene-E3V42_04505;Dbxref=NCBI_GP:TMR84316.1;Name=TMR84316.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445682.1;locus_tag=E3V42_04505;product=oligoendopeptidase F;protein_id=TMR84316.1;transl_table=11 SOQV01000041.1 Genbank gene 110256 110999 . - . ID=gene-E3V42_04510;Name=E3V42_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04510 SOQV01000041.1 Protein Homology CDS 110256 110999 . - 0 ID=cds-TMR84317.1;Parent=gene-E3V42_04510;Dbxref=NCBI_GP:TMR84317.1;Name=TMR84317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445681.1;locus_tag=E3V42_04510;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TMR84317.1;transl_table=11 SOQV01000041.1 Genbank gene 111001 111951 . - . ID=gene-E3V42_04515;Name=E3V42_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04515 SOQV01000041.1 Protein Homology CDS 111001 111951 . - 0 ID=cds-TMR84318.1;Parent=gene-E3V42_04515;Dbxref=NCBI_GP:TMR84318.1;Name=TMR84318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359200.2;locus_tag=E3V42_04515;product=50S ribosomal protein L11 methyltransferase;protein_id=TMR84318.1;transl_table=11 SOQV01000041.1 Genbank gene 112089 112562 . - . ID=gene-E3V42_04520;Name=E3V42_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04520 SOQV01000041.1 Protein Homology CDS 112089 112562 . - 0 ID=cds-TMR84319.1;Parent=gene-E3V42_04520;Dbxref=NCBI_GP:TMR84319.1;Name=TMR84319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003013602.1;locus_tag=E3V42_04520;product=GNAT family N-acetyltransferase;protein_id=TMR84319.1;transl_table=11 SOQV01000041.1 Genbank gene 112559 112993 . - . ID=gene-E3V42_04525;Name=E3V42_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04525 SOQV01000041.1 Protein Homology CDS 112559 112993 . - 0 ID=cds-TMR84320.1;Parent=gene-E3V42_04525;Dbxref=NCBI_GP:TMR84320.1;Name=TMR84320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421872.1;locus_tag=E3V42_04525;product=NUDIX domain-containing protein;protein_id=TMR84320.1;transl_table=11 SOQV01000041.1 Genbank gene 113043 113585 . - . ID=gene-E3V42_04530;Name=E3V42_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04530 SOQV01000041.1 Protein Homology CDS 113043 113585 . - 0 ID=cds-TMR84321.1;Parent=gene-E3V42_04530;Dbxref=NCBI_GP:TMR84321.1;Name=TMR84321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595081.1;locus_tag=E3V42_04530;product=hypothetical protein;protein_id=TMR84321.1;transl_table=11 SOQV01000041.1 Genbank gene 113641 114111 . - . ID=gene-E3V42_04535;Name=E3V42_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04535 SOQV01000041.1 Protein Homology CDS 113641 114111 . - 0 ID=cds-TMR84322.1;Parent=gene-E3V42_04535;Dbxref=NCBI_GP:TMR84322.1;Name=TMR84322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359203.1;locus_tag=E3V42_04535;product=DUF3013 family protein;protein_id=TMR84322.1;transl_table=11 SOQV01000041.1 Genbank gene 114402 114854 . - . ID=gene-E3V42_04540;Name=E3V42_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04540 SOQV01000041.1 Protein Homology CDS 114402 114854 . - 0 ID=cds-TMR84323.1;Parent=gene-E3V42_04540;Dbxref=NCBI_GP:TMR84323.1;Name=TMR84323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359204.1;locus_tag=E3V42_04540;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=TMR84323.1;transl_table=11 SOQV01000041.1 Genbank gene 114891 115097 . - . ID=gene-E3V42_04545;Name=E3V42_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04545 SOQV01000041.1 Protein Homology CDS 114891 115097 . - 0 ID=cds-TMR84324.1;Parent=gene-E3V42_04545;Dbxref=NCBI_GP:TMR84324.1;Name=TMR84324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359205.1;locus_tag=E3V42_04545;product=type II toxin-antitoxin system HicA family toxin;protein_id=TMR84324.1;transl_table=11 SOQV01000041.1 Genbank gene 115207 115377 . - . ID=gene-E3V42_04550;Name=E3V42_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04550 SOQV01000041.1 Protein Homology CDS 115207 115377 . - 0 ID=cds-TMR84413.1;Parent=gene-E3V42_04550;Dbxref=NCBI_GP:TMR84413.1;Name=TMR84413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001840169.1;locus_tag=E3V42_04550;product=hypothetical protein;protein_id=TMR84413.1;transl_table=11 SOQV01000041.1 Genbank gene 115550 115765 . - . ID=gene-E3V42_04555;Name=E3V42_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04555 SOQV01000041.1 Protein Homology CDS 115550 115765 . - 0 ID=cds-TMR84412.1;Parent=gene-E3V42_04555;Dbxref=NCBI_GP:TMR84412.1;Name=TMR84412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860604.1;locus_tag=E3V42_04555;product=hypothetical protein;protein_id=TMR84412.1;transl_table=11 SOQV01000041.1 Genbank gene 116063 117334 . + . ID=gene-E3V42_04560;Name=E3V42_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04560 SOQV01000041.1 Protein Homology CDS 116063 117334 . + 0 ID=cds-TMR84325.1;Parent=gene-E3V42_04560;Dbxref=NCBI_GP:TMR84325.1;Name=TMR84325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359208.1;locus_tag=E3V42_04560;product=replication-associated recombination protein A;protein_id=TMR84325.1;transl_table=11 SOQV01000041.1 Genbank gene 117599 117671 . + . ID=gene-E3V42_04565;Name=E3V42_04565;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_04565 SOQV01000041.1 tRNAscan-SE tRNA 117599 117671 . + . ID=rna-E3V42_04565;Parent=gene-E3V42_04565;anticodon=(pos:117632..117634);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_04565;product=tRNA-Lys SOQV01000041.1 tRNAscan-SE exon 117599 117671 . + . ID=exon-E3V42_04565-1;Parent=rna-E3V42_04565;anticodon=(pos:117632..117634);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_04565;product=tRNA-Lys SOQV01000041.1 Genbank gene 117879 119198 . - . ID=gene-E3V42_04570;Name=E3V42_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04570 SOQV01000041.1 Protein Homology CDS 117879 119198 . - 0 ID=cds-TMR84326.1;Parent=gene-E3V42_04570;Dbxref=NCBI_GP:TMR84326.1;Name=TMR84326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359209.1;locus_tag=E3V42_04570;product=glycoside hydrolase family 32 protein;protein_id=TMR84326.1;transl_table=11 SOQV01000041.1 Genbank gene 119208 120824 . - . ID=gene-E3V42_04575;Name=E3V42_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04575 SOQV01000041.1 Protein Homology CDS 119208 120824 . - 0 ID=cds-TMR84327.1;Parent=gene-E3V42_04575;Dbxref=NCBI_GP:TMR84327.1;Name=TMR84327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669747.1;locus_tag=E3V42_04575;product=extracellular solute-binding protein;protein_id=TMR84327.1;transl_table=11 SOQV01000041.1 Genbank gene 120853 121743 . - . ID=gene-E3V42_04580;Name=E3V42_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04580 SOQV01000041.1 Protein Homology CDS 120853 121743 . - 0 ID=cds-TMR84328.1;Parent=gene-E3V42_04580;Dbxref=NCBI_GP:TMR84328.1;Name=TMR84328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797960.1;locus_tag=E3V42_04580;product=carbohydrate ABC transporter permease;protein_id=TMR84328.1;transl_table=11 SOQV01000041.1 Genbank gene 121754 122671 . - . ID=gene-E3V42_04585;Name=E3V42_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04585 SOQV01000041.1 Protein Homology CDS 121754 122671 . - 0 ID=cds-TMR84329.1;Parent=gene-E3V42_04585;Dbxref=NCBI_GP:TMR84329.1;Name=TMR84329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084977.1;locus_tag=E3V42_04585;product=sugar ABC transporter permease;protein_id=TMR84329.1;transl_table=11 SOQV01000041.1 Genbank gene 122823 123824 . - . ID=gene-E3V42_04590;Name=E3V42_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04590 SOQV01000041.1 Protein Homology CDS 122823 123824 . - 0 ID=cds-TMR84330.1;Parent=gene-E3V42_04590;Dbxref=NCBI_GP:TMR84330.1;Name=TMR84330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230206.1;locus_tag=E3V42_04590;product=LacI family transcriptional regulator;protein_id=TMR84330.1;transl_table=11 SOQV01000041.1 Genbank gene 124005 124460 . - . ID=gene-E3V42_04595;Name=E3V42_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04595 SOQV01000041.1 Protein Homology CDS 124005 124460 . - 0 ID=cds-TMR84331.1;Parent=gene-E3V42_04595;Dbxref=NCBI_GP:TMR84331.1;Name=TMR84331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605875.1;locus_tag=E3V42_04595;product=GNAT family N-acetyltransferase;protein_id=TMR84331.1;transl_table=11 SOQV01000041.1 Genbank gene 124530 125189 . + . ID=gene-E3V42_04600;Name=E3V42_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04600 SOQV01000041.1 Protein Homology CDS 124530 125189 . + 0 ID=cds-TMR84332.1;Parent=gene-E3V42_04600;Dbxref=NCBI_GP:TMR84332.1;Name=TMR84332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359220.1;locus_tag=E3V42_04600;product=prepilin peptidase;protein_id=TMR84332.1;transl_table=11 SOQV01000041.1 Genbank gene 125241 126392 . - . ID=gene-E3V42_04605;Name=E3V42_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04605 SOQV01000041.1 Protein Homology CDS 125241 126392 . - 0 ID=cds-TMR84333.1;Parent=gene-E3V42_04605;Dbxref=NCBI_GP:TMR84333.1;Name=TMR84333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359221.1;locus_tag=E3V42_04605;product=ImmA/IrrE family metallo-endopeptidase;protein_id=TMR84333.1;transl_table=11 SOQV01000041.1 Genbank gene 126407 127138 . - . ID=gene-E3V42_04610;Name=E3V42_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04610 SOQV01000041.1 Protein Homology CDS 126407 127138 . - 0 ID=cds-TMR84334.1;Parent=gene-E3V42_04610;Dbxref=NCBI_GP:TMR84334.1;Name=TMR84334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359222.1;locus_tag=E3V42_04610;product=hypothetical protein;protein_id=TMR84334.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 127262 127360 . + . ID=gene-E3V42_04615;Name=E3V42_04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04615;pseudo=true SOQV01000041.1 Protein Homology CDS 127262 127360 . + 0 ID=cds-E3V42_04615;Parent=gene-E3V42_04615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359220.1;locus_tag=E3V42_04615;product=prepilin peptidase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 127332 128108 . - . ID=gene-E3V42_04620;Name=E3V42_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04620 SOQV01000041.1 Protein Homology CDS 127332 128108 . - 0 ID=cds-TMR84335.1;Parent=gene-E3V42_04620;Dbxref=NCBI_GP:TMR84335.1;Name=TMR84335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359223.1;locus_tag=E3V42_04620;product=tryptophan synthase subunit alpha;protein_id=TMR84335.1;transl_table=11 SOQV01000041.1 Genbank gene 128101 129324 . - . ID=gene-E3V42_04625;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=E3V42_04625 SOQV01000041.1 Protein Homology CDS 128101 129324 . - 0 ID=cds-TMR84336.1;Parent=gene-E3V42_04625;Dbxref=NCBI_GP:TMR84336.1;Name=TMR84336.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359224.1;locus_tag=E3V42_04625;product=tryptophan synthase subunit beta;protein_id=TMR84336.1;transl_table=11 SOQV01000041.1 Genbank gene 129302 129901 . - . ID=gene-E3V42_04630;Name=E3V42_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04630 SOQV01000041.1 Protein Homology CDS 129302 129901 . - 0 ID=cds-TMR84337.1;Parent=gene-E3V42_04630;Dbxref=NCBI_GP:TMR84337.1;Name=TMR84337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445663.1;locus_tag=E3V42_04630;product=phosphoribosylanthranilate isomerase;protein_id=TMR84337.1;transl_table=11 SOQV01000041.1 Genbank gene 129888 130655 . - . ID=gene-E3V42_04635;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=E3V42_04635 SOQV01000041.1 Protein Homology CDS 129888 130655 . - 0 ID=cds-TMR84338.1;Parent=gene-E3V42_04635;Dbxref=NCBI_GP:TMR84338.1;Name=TMR84338.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359226.1;locus_tag=E3V42_04635;product=indole-3-glycerol phosphate synthase TrpC;protein_id=TMR84338.1;transl_table=11 SOQV01000041.1 Genbank gene 130652 131656 . - . ID=gene-E3V42_04640;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=E3V42_04640 SOQV01000041.1 Protein Homology CDS 130652 131656 . - 0 ID=cds-TMR84339.1;Parent=gene-E3V42_04640;Dbxref=NCBI_GP:TMR84339.1;Name=TMR84339.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359227.1;locus_tag=E3V42_04640;product=anthranilate phosphoribosyltransferase;protein_id=TMR84339.1;transl_table=11 SOQV01000041.1 Genbank gene 131667 132233 . - . ID=gene-E3V42_04645;Name=E3V42_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04645 SOQV01000041.1 Protein Homology CDS 131667 132233 . - 0 ID=cds-TMR84340.1;Parent=gene-E3V42_04645;Dbxref=NCBI_GP:TMR84340.1;Name=TMR84340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359228.1;locus_tag=E3V42_04645;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=TMR84340.1;transl_table=11 SOQV01000041.1 Genbank gene 132230 133591 . - . ID=gene-E3V42_04650;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=E3V42_04650 SOQV01000041.1 Protein Homology CDS 132230 133591 . - 0 ID=cds-TMR84341.1;Parent=gene-E3V42_04650;Dbxref=NCBI_GP:TMR84341.1;Name=TMR84341.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359229.2;locus_tag=E3V42_04650;product=anthranilate synthase component I;protein_id=TMR84341.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 133964 134059 . - . ID=gene-E3V42_04655;Name=E3V42_04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04655;pseudo=true SOQV01000041.1 Protein Homology CDS 133964 134059 . - 0 ID=cds-E3V42_04655;Parent=gene-E3V42_04655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1;locus_tag=E3V42_04655;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank pseudogene 134231 134305 . - . ID=gene-E3V42_04660;Name=E3V42_04660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04660;pseudo=true SOQV01000041.1 Protein Homology CDS 134231 134305 . - 0 ID=cds-E3V42_04660;Parent=gene-E3V42_04660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_04660;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 134914 135915 . - . ID=gene-E3V42_04665;Name=E3V42_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04665 SOQV01000041.1 Protein Homology CDS 134914 135915 . - 0 ID=cds-TMR84342.1;Parent=gene-E3V42_04665;Dbxref=NCBI_GP:TMR84342.1;Name=TMR84342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359231.1;locus_tag=E3V42_04665;product=LacI family transcriptional regulator;protein_id=TMR84342.1;transl_table=11 SOQV01000041.1 Genbank gene 136023 136391 . - . ID=gene-E3V42_04670;Name=E3V42_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04670 SOQV01000041.1 Protein Homology CDS 136023 136391 . - 0 ID=cds-TMR84343.1;Parent=gene-E3V42_04670;Dbxref=NCBI_GP:TMR84343.1;Name=TMR84343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359232.1;locus_tag=E3V42_04670;product=hypothetical protein;protein_id=TMR84343.1;transl_table=11 SOQV01000041.1 Genbank gene 136487 137197 . - . ID=gene-E3V42_04675;Name=E3V42_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04675 SOQV01000041.1 Protein Homology CDS 136487 137197 . - 0 ID=cds-TMR84344.1;Parent=gene-E3V42_04675;Dbxref=NCBI_GP:TMR84344.1;Name=TMR84344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359233.1;locus_tag=E3V42_04675;product=MgtC/SapB family protein;protein_id=TMR84344.1;transl_table=11 SOQV01000041.1 Genbank gene 137200 138891 . - . ID=gene-E3V42_04680;Name=E3V42_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04680 SOQV01000041.1 Protein Homology CDS 137200 138891 . - 0 ID=cds-TMR84345.1;Parent=gene-E3V42_04680;Dbxref=NCBI_GP:TMR84345.1;Name=TMR84345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359235.1;locus_tag=E3V42_04680;product=iron ABC transporter permease;protein_id=TMR84345.1;transl_table=11 SOQV01000041.1 Genbank gene 138903 139913 . - . ID=gene-E3V42_04685;Name=E3V42_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04685 SOQV01000041.1 Protein Homology CDS 138903 139913 . - 0 ID=cds-TMR84346.1;Parent=gene-E3V42_04685;Dbxref=NCBI_GP:TMR84346.1;Name=TMR84346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359236.1;locus_tag=E3V42_04685;product=ABC transporter ATP-binding protein;protein_id=TMR84346.1;transl_table=11 SOQV01000041.1 Genbank gene 140017 141084 . - . ID=gene-E3V42_04690;Name=E3V42_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04690 SOQV01000041.1 Protein Homology CDS 140017 141084 . - 0 ID=cds-TMR84347.1;Parent=gene-E3V42_04690;Dbxref=NCBI_GP:TMR84347.1;Name=TMR84347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359237.1;locus_tag=E3V42_04690;product=extracellular solute-binding protein;protein_id=TMR84347.1;transl_table=11 SOQV01000041.1 Genbank gene 141109 141768 . - . ID=gene-E3V42_04695;Name=E3V42_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04695 SOQV01000041.1 Protein Homology CDS 141109 141768 . - 0 ID=cds-TMR84348.1;Parent=gene-E3V42_04695;Dbxref=NCBI_GP:TMR84348.1;Name=TMR84348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359238.1;locus_tag=E3V42_04695;product=DUF1868 domain-containing protein;protein_id=TMR84348.1;transl_table=11 SOQV01000041.1 Genbank gene 141947 142957 . - . ID=gene-E3V42_04700;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=E3V42_04700 SOQV01000041.1 Protein Homology CDS 141947 142957 . - 0 ID=cds-TMR84349.1;Parent=gene-E3V42_04700;Dbxref=NCBI_GP:TMR84349.1;Name=TMR84349.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996568.1;locus_tag=E3V42_04700;product=UDP-glucose 4-epimerase GalE;protein_id=TMR84349.1;transl_table=11 SOQV01000041.1 Genbank gene 142970 144445 . - . ID=gene-E3V42_04705;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=E3V42_04705 SOQV01000041.1 Protein Homology CDS 142970 144445 . - 0 ID=cds-TMR84350.1;Parent=gene-E3V42_04705;Dbxref=NCBI_GP:TMR84350.1;Name=TMR84350.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359240.1;locus_tag=E3V42_04705;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=TMR84350.1;transl_table=11 SOQV01000041.1 Genbank gene 144458 145099 . - . ID=gene-E3V42_04710;Name=E3V42_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04710 SOQV01000041.1 Protein Homology CDS 144458 145099 . - 0 ID=cds-TMR84351.1;Parent=gene-E3V42_04710;Dbxref=NCBI_GP:TMR84351.1;Name=TMR84351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359241.1;locus_tag=E3V42_04710;product=phosphate uptake regulator PhoU;protein_id=TMR84351.1;transl_table=11 SOQV01000041.1 Genbank gene 145157 145903 . - . ID=gene-E3V42_04715;Name=E3V42_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04715 SOQV01000041.1 Protein Homology CDS 145157 145903 . - 0 ID=cds-TMR84352.1;Parent=gene-E3V42_04715;Dbxref=NCBI_GP:TMR84352.1;Name=TMR84352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239016.1;locus_tag=E3V42_04715;product=protein phosphatase 2C family protein;protein_id=TMR84352.1;transl_table=11 SOQV01000041.1 Genbank gene 145887 148013 . - . ID=gene-E3V42_04720;Name=pfbA;gbkey=Gene;gene=pfbA;gene_biotype=protein_coding;locus_tag=E3V42_04720 SOQV01000041.1 Protein Homology CDS 145887 148013 . - 0 ID=cds-TMR84353.1;Parent=gene-E3V42_04720;Dbxref=NCBI_GP:TMR84353.1;Name=TMR84353.1;gbkey=CDS;gene=pfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398455.1;locus_tag=E3V42_04720;product=multi-ligand-binding adhesin PfbA;protein_id=TMR84353.1;transl_table=11 SOQV01000041.1 Genbank gene 148327 148557 . - . ID=gene-E3V42_04725;Name=E3V42_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04725 SOQV01000041.1 Protein Homology CDS 148327 148557 . - 0 ID=cds-TMR84354.1;Parent=gene-E3V42_04725;Dbxref=NCBI_GP:TMR84354.1;Name=TMR84354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280107.1;locus_tag=E3V42_04725;product=hypothetical protein;protein_id=TMR84354.1;transl_table=11 SOQV01000041.1 Genbank gene 149176 150402 . - . ID=gene-E3V42_04730;Name=E3V42_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04730 SOQV01000041.1 Protein Homology CDS 149176 150402 . - 0 ID=cds-TMR84355.1;Parent=gene-E3V42_04730;Dbxref=NCBI_GP:TMR84355.1;Name=TMR84355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445657.1;locus_tag=E3V42_04730;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=TMR84355.1;transl_table=11 SOQV01000041.1 Genbank gene 150445 151137 . - . ID=gene-E3V42_04735;Name=E3V42_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04735 SOQV01000041.1 Protein Homology CDS 150445 151137 . - 0 ID=cds-TMR84356.1;Parent=gene-E3V42_04735;Dbxref=NCBI_GP:TMR84356.1;Name=TMR84356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445656.1;locus_tag=E3V42_04735;product=sugar transferase;protein_id=TMR84356.1;transl_table=11 SOQV01000041.1 Genbank gene 151267 153009 . - . ID=gene-E3V42_04740;Name=E3V42_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04740 SOQV01000041.1 Protein Homology CDS 151267 153009 . - 0 ID=cds-TMR84357.1;Parent=gene-E3V42_04740;Dbxref=NCBI_GP:TMR84357.1;Name=TMR84357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359248.1;locus_tag=E3V42_04740;product=ABC transporter ATP-binding protein;protein_id=TMR84357.1;transl_table=11 SOQV01000041.1 Genbank gene 152999 154744 . - . ID=gene-E3V42_04745;Name=E3V42_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04745 SOQV01000041.1 Protein Homology CDS 152999 154744 . - 0 ID=cds-TMR84358.1;Parent=gene-E3V42_04745;Dbxref=NCBI_GP:TMR84358.1;Name=TMR84358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445654.1;locus_tag=E3V42_04745;product=ATP-binding cassette domain-containing protein;protein_id=TMR84358.1;transl_table=11 SOQV01000041.1 Genbank gene 154799 155278 . - . ID=gene-E3V42_04750;Name=E3V42_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04750 SOQV01000041.1 Protein Homology CDS 154799 155278 . - 0 ID=cds-TMR84359.1;Parent=gene-E3V42_04750;Dbxref=NCBI_GP:TMR84359.1;Name=TMR84359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284967.1;locus_tag=E3V42_04750;product=DUF421 domain-containing protein;protein_id=TMR84359.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 155427 155691 . - . ID=gene-E3V42_04755;Name=E3V42_04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04755;pseudo=true SOQV01000041.1 Protein Homology CDS 155427 155691 . - 0 ID=cds-E3V42_04755;Parent=gene-E3V42_04755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837066.1;locus_tag=E3V42_04755;product=DUF3290 family protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 155741 155878 . - . ID=gene-E3V42_04760;Name=E3V42_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04760 SOQV01000041.1 Protein Homology CDS 155741 155878 . - 0 ID=cds-TMR84360.1;Parent=gene-E3V42_04760;Dbxref=NCBI_GP:TMR84360.1;Name=TMR84360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850047.1;locus_tag=E3V42_04760;product=DUF3290 family protein;protein_id=TMR84360.1;transl_table=11 SOQV01000041.1 Genbank gene 156005 156646 . - . ID=gene-E3V42_04765;Name=E3V42_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04765 SOQV01000041.1 Protein Homology CDS 156005 156646 . - 0 ID=cds-TMR84361.1;Parent=gene-E3V42_04765;Dbxref=NCBI_GP:TMR84361.1;Name=TMR84361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445651.1;locus_tag=E3V42_04765;product=DUF1648 domain-containing protein;protein_id=TMR84361.1;transl_table=11 SOQV01000041.1 Genbank gene 156627 156914 . - . ID=gene-E3V42_04770;Name=E3V42_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04770 SOQV01000041.1 Protein Homology CDS 156627 156914 . - 0 ID=cds-TMR84362.1;Parent=gene-E3V42_04770;Dbxref=NCBI_GP:TMR84362.1;Name=TMR84362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445650.1;locus_tag=E3V42_04770;product=ArsR family transcriptional regulator;protein_id=TMR84362.1;transl_table=11 SOQV01000041.1 Genbank gene 156898 157797 . - . ID=gene-E3V42_04775;Name=E3V42_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04775 SOQV01000041.1 Protein Homology CDS 156898 157797 . - 0 ID=cds-TMR84363.1;Parent=gene-E3V42_04775;Dbxref=NCBI_GP:TMR84363.1;Name=TMR84363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445649.1;locus_tag=E3V42_04775;product=CPBP family intramembrane metalloprotease;protein_id=TMR84363.1;transl_table=11 SOQV01000041.1 Genbank gene 158017 158844 . + . ID=gene-E3V42_04780;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=E3V42_04780 SOQV01000041.1 Protein Homology CDS 158017 158844 . + 0 ID=cds-TMR84364.1;Parent=gene-E3V42_04780;Dbxref=NCBI_GP:TMR84364.1;Name=TMR84364.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445648.1;locus_tag=E3V42_04780;product=exodeoxyribonuclease III;protein_id=TMR84364.1;transl_table=11 SOQV01000041.1 Genbank gene 158856 159242 . + . ID=gene-E3V42_04785;Name=E3V42_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04785 SOQV01000041.1 Protein Homology CDS 158856 159242 . + 0 ID=cds-TMR84365.1;Parent=gene-E3V42_04785;Dbxref=NCBI_GP:TMR84365.1;Name=TMR84365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035640.1;locus_tag=E3V42_04785;product=VOC family protein;protein_id=TMR84365.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 159342 159416 . + . ID=gene-E3V42_04790;Name=E3V42_04790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04790;pseudo=true SOQV01000041.1 Protein Homology CDS 159342 159416 . + 0 ID=cds-E3V42_04790;Parent=gene-E3V42_04790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_04790;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000041.1 cmsearch riboswitch 159583 159678 . + . ID=id-SOQV01000041.1:159583..159678;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000041.1 Genbank gene 159802 160383 . + . ID=gene-E3V42_04795;Name=E3V42_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04795 SOQV01000041.1 Protein Homology CDS 159802 160383 . + 0 ID=cds-TMR84366.1;Parent=gene-E3V42_04795;Dbxref=NCBI_GP:TMR84366.1;Name=TMR84366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445646.1;locus_tag=E3V42_04795;product=xanthine phosphoribosyltransferase;protein_id=TMR84366.1;transl_table=11 SOQV01000041.1 Genbank gene 160383 161645 . + . ID=gene-E3V42_04800;Name=E3V42_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04800 SOQV01000041.1 Protein Homology CDS 160383 161645 . + 0 ID=cds-TMR84367.1;Parent=gene-E3V42_04800;Dbxref=NCBI_GP:TMR84367.1;Name=TMR84367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445645.1;locus_tag=E3V42_04800;product=purine permease;protein_id=TMR84367.1;transl_table=11 SOQV01000041.1 Genbank gene 161701 163191 . - . ID=gene-E3V42_04805;Name=E3V42_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04805 SOQV01000041.1 Protein Homology CDS 161701 163191 . - 0 ID=cds-TMR84368.1;Parent=gene-E3V42_04805;Dbxref=NCBI_GP:TMR84368.1;Name=TMR84368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003712295.1;locus_tag=E3V42_04805;product=DNA mismatch repair protein MutH;protein_id=TMR84368.1;transl_table=11 SOQV01000041.1 Genbank gene 163308 164573 . + . ID=gene-E3V42_04810;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=E3V42_04810 SOQV01000041.1 Protein Homology CDS 163308 164573 . + 0 ID=cds-TMR84369.1;Parent=gene-E3V42_04810;Dbxref=NCBI_GP:TMR84369.1;Name=TMR84369.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886006.1;locus_tag=E3V42_04810;product=DNA (cytosine-5-)-methyltransferase;protein_id=TMR84369.1;transl_table=11 SOQV01000041.1 Genbank gene 164637 164804 . - . ID=gene-E3V42_04815;Name=E3V42_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04815 SOQV01000041.1 Protein Homology CDS 164637 164804 . - 0 ID=cds-TMR84414.1;Parent=gene-E3V42_04815;Dbxref=NCBI_GP:TMR84414.1;Name=TMR84414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760983.1;locus_tag=E3V42_04815;product=protein dpnD;protein_id=TMR84414.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 165013 165775 . - . ID=gene-E3V42_04820;Name=E3V42_04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04820;pseudo=true SOQV01000041.1 Protein Homology CDS 165013 165775 . - 0 ID=cds-E3V42_04820;Parent=gene-E3V42_04820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359257.1;locus_tag=E3V42_04820;product=restriction endonuclease;pseudo=true;transl_table=11 SOQV01000041.1 Genbank pseudogene 166332 166403 . + . ID=gene-E3V42_04825;Name=E3V42_04825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04825;pseudo=true SOQV01000041.1 Protein Homology CDS 166332 166403 . + 0 ID=cds-E3V42_04825;Parent=gene-E3V42_04825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_04825;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 166510 166860 . - . ID=gene-E3V42_04830;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=E3V42_04830 SOQV01000041.1 Protein Homology CDS 166510 166860 . - 0 ID=cds-TMR84370.1;Parent=gene-E3V42_04830;Dbxref=NCBI_GP:TMR84370.1;Name=TMR84370.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445520.1;locus_tag=E3V42_04830;product=30S ribosome-binding factor RbfA;protein_id=TMR84370.1;transl_table=11 SOQV01000041.1 Genbank gene 167026 169827 . - . ID=gene-E3V42_04835;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=E3V42_04835 SOQV01000041.1 Protein Homology CDS 167026 169827 . - 0 ID=cds-TMR84371.1;Parent=gene-E3V42_04835;Dbxref=NCBI_GP:TMR84371.1;Name=TMR84371.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445519.1;locus_tag=E3V42_04835;product=translation initiation factor IF-2;protein_id=TMR84371.1;transl_table=11 SOQV01000041.1 Genbank gene 169844 170143 . - . ID=gene-E3V42_04840;Name=E3V42_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04840 SOQV01000041.1 Protein Homology CDS 169844 170143 . - 0 ID=cds-TMR84372.1;Parent=gene-E3V42_04840;Dbxref=NCBI_GP:TMR84372.1;Name=TMR84372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358074.1;locus_tag=E3V42_04840;product=YlxQ-related RNA-binding protein;protein_id=TMR84372.1;transl_table=11 SOQV01000041.1 Genbank gene 170136 170429 . - . ID=gene-E3V42_04845;Name=E3V42_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04845 SOQV01000041.1 Protein Homology CDS 170136 170429 . - 0 ID=cds-TMR84373.1;Parent=gene-E3V42_04845;Dbxref=NCBI_GP:TMR84373.1;Name=TMR84373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358073.1;locus_tag=E3V42_04845;product=YlxR family protein;protein_id=TMR84373.1;transl_table=11 SOQV01000041.1 Genbank gene 170451 171587 . - . ID=gene-E3V42_04850;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=E3V42_04850 SOQV01000041.1 Protein Homology CDS 170451 171587 . - 0 ID=cds-TMR84374.1;Parent=gene-E3V42_04850;Dbxref=NCBI_GP:TMR84374.1;Name=TMR84374.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358072.1;locus_tag=E3V42_04850;product=transcription termination/antitermination protein NusA;protein_id=TMR84374.1;transl_table=11 SOQV01000041.1 Genbank gene 171631 172110 . - . ID=gene-E3V42_04855;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=E3V42_04855 SOQV01000041.1 Protein Homology CDS 171631 172110 . - 0 ID=cds-TMR84375.1;Parent=gene-E3V42_04855;Dbxref=NCBI_GP:TMR84375.1;Name=TMR84375.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358071.1;locus_tag=E3V42_04855;product=ribosome maturation factor RimP;protein_id=TMR84375.1;transl_table=11 SOQV01000041.1 Genbank gene 172237 172872 . - . ID=gene-E3V42_04860;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=E3V42_04860 SOQV01000041.1 Protein Homology CDS 172237 172872 . - 0 ID=cds-TMR84376.1;Parent=gene-E3V42_04860;Dbxref=NCBI_GP:TMR84376.1;Name=TMR84376.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358070.1;locus_tag=E3V42_04860;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=TMR84376.1;transl_table=11 SOQV01000041.1 Genbank gene 172869 173663 . - . ID=gene-E3V42_04865;Name=E3V42_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04865 SOQV01000041.1 Protein Homology CDS 172869 173663 . - 0 ID=cds-TMR84377.1;Parent=gene-E3V42_04865;Dbxref=NCBI_GP:TMR84377.1;Name=TMR84377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445513.1;locus_tag=E3V42_04865;product=aminoglycoside phosphotransferase;protein_id=TMR84377.1;transl_table=11 SOQV01000041.1 Genbank gene 173826 174437 . - . ID=gene-E3V42_04870;Name=E3V42_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04870 SOQV01000041.1 Protein Homology CDS 173826 174437 . - 0 ID=cds-TMR84378.1;Parent=gene-E3V42_04870;Dbxref=NCBI_GP:TMR84378.1;Name=TMR84378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358068.1;locus_tag=E3V42_04870;product=CPBP family intramembrane metalloprotease;protein_id=TMR84378.1;transl_table=11 SOQV01000041.1 Genbank gene 174467 174715 . - . ID=gene-E3V42_04875;Name=E3V42_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04875 SOQV01000041.1 Protein Homology CDS 174467 174715 . - 0 ID=cds-TMR84379.1;Parent=gene-E3V42_04875;Dbxref=NCBI_GP:TMR84379.1;Name=TMR84379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399200.1;locus_tag=E3V42_04875;product=hypothetical protein;protein_id=TMR84379.1;transl_table=11 SOQV01000041.1 Genbank gene 174756 175445 . - . ID=gene-E3V42_04880;Name=E3V42_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04880 SOQV01000041.1 Protein Homology CDS 174756 175445 . - 0 ID=cds-TMR84380.1;Parent=gene-E3V42_04880;Dbxref=NCBI_GP:TMR84380.1;Name=TMR84380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447088.1;locus_tag=E3V42_04880;product=CPBP family intramembrane metalloprotease;protein_id=TMR84380.1;transl_table=11 SOQV01000041.1 Genbank gene 175477 175710 . - . ID=gene-E3V42_04885;Name=E3V42_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04885 SOQV01000041.1 Protein Homology CDS 175477 175710 . - 0 ID=cds-TMR84381.1;Parent=gene-E3V42_04885;Dbxref=NCBI_GP:TMR84381.1;Name=TMR84381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358064.1;locus_tag=E3V42_04885;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=TMR84381.1;transl_table=11 SOQV01000041.1 Genbank gene 175922 176278 . - . ID=gene-E3V42_04890;Name=E3V42_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04890 SOQV01000041.1 Protein Homology CDS 175922 176278 . - 0 ID=cds-TMR84382.1;Parent=gene-E3V42_04890;Dbxref=NCBI_GP:TMR84382.1;Name=TMR84382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445507.1;locus_tag=E3V42_04890;product=hypothetical protein;protein_id=TMR84382.1;transl_table=11 SOQV01000041.1 Genbank gene 176617 176895 . - . ID=gene-E3V42_04895;Name=E3V42_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04895 SOQV01000041.1 Protein Homology CDS 176617 176895 . - 0 ID=cds-TMR84383.1;Parent=gene-E3V42_04895;Dbxref=NCBI_GP:TMR84383.1;Name=TMR84383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042208.1;locus_tag=E3V42_04895;product=hypothetical protein;protein_id=TMR84383.1;transl_table=11 SOQV01000041.1 Genbank gene 177065 178123 . - . ID=gene-E3V42_04900;Name=E3V42_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04900 SOQV01000041.1 Protein Homology CDS 177065 178123 . - 0 ID=cds-TMR84384.1;Parent=gene-E3V42_04900;Dbxref=NCBI_GP:TMR84384.1;Name=TMR84384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795768.1;locus_tag=E3V42_04900;product=transposase;protein_id=TMR84384.1;transl_table=11 SOQV01000041.1 Genbank pseudogene 178284 178542 . - . ID=gene-E3V42_04905;Name=E3V42_04905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_04905;pseudo=true SOQV01000041.1 Protein Homology CDS 178284 178542 . - 0 ID=cds-E3V42_04905;Parent=gene-E3V42_04905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845206.1;locus_tag=E3V42_04905;product=immunity protein;pseudo=true;transl_table=11 SOQV01000041.1 Genbank gene 178928 179146 . - . ID=gene-E3V42_04910;Name=E3V42_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04910 SOQV01000041.1 Protein Homology CDS 178928 179146 . - 0 ID=cds-TMR84385.1;Parent=gene-E3V42_04910;Dbxref=NCBI_GP:TMR84385.1;Name=TMR84385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438253.1;locus_tag=E3V42_04910;product=hypothetical protein;protein_id=TMR84385.1;transl_table=11 SOQV01000041.1 Genbank gene 179152 179526 . - . ID=gene-E3V42_04915;Name=E3V42_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04915 SOQV01000041.1 Protein Homology CDS 179152 179526 . - 0 ID=cds-TMR84386.1;Parent=gene-E3V42_04915;Dbxref=NCBI_GP:TMR84386.1;Name=TMR84386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270580.1;locus_tag=E3V42_04915;product=immunity protein;protein_id=TMR84386.1;transl_table=11 SOQV01000041.1 Genbank gene 179578 179805 . - . ID=gene-E3V42_04920;Name=E3V42_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04920 SOQV01000041.1 Protein Homology CDS 179578 179805 . - 0 ID=cds-TMR84387.1;Parent=gene-E3V42_04920;Dbxref=NCBI_GP:TMR84387.1;Name=TMR84387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379955.1;locus_tag=E3V42_04920;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=TMR84387.1;transl_table=11 SOQV01000041.1 Genbank gene 180086 182239 . + . ID=gene-E3V42_04925;Name=blpA;gbkey=Gene;gene=blpA;gene_biotype=protein_coding;locus_tag=E3V42_04925 SOQV01000041.1 Protein Homology CDS 180086 182239 . + 0 ID=cds-TMR84388.1;Parent=gene-E3V42_04925;Dbxref=NCBI_GP:TMR84388.1;Name=TMR84388.1;gbkey=CDS;gene=blpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125458604.1;locus_tag=E3V42_04925;product=peptide cleavage/export ABC transporter BlpA;protein_id=TMR84388.1;transl_table=11 SOQV01000041.1 Genbank gene 182250 183611 . + . ID=gene-E3V42_04930;Name=E3V42_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04930 SOQV01000041.1 Protein Homology CDS 182250 183611 . + 0 ID=cds-TMR84389.1;Parent=gene-E3V42_04930;Dbxref=NCBI_GP:TMR84389.1;Name=TMR84389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069090.1;locus_tag=E3V42_04930;product=bacteriocin secretion accessory protein;protein_id=TMR84389.1;transl_table=11 SOQV01000041.1 Genbank gene 183668 183823 . + . ID=gene-E3V42_04935;Name=blpC;gbkey=Gene;gene=blpC;gene_biotype=protein_coding;locus_tag=E3V42_04935 SOQV01000041.1 Protein Homology CDS 183668 183823 . + 0 ID=cds-TMR84390.1;Parent=gene-E3V42_04935;Dbxref=NCBI_GP:TMR84390.1;Name=TMR84390.1;gbkey=CDS;gene=blpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358810.1;locus_tag=E3V42_04935;product=quorum-sensing system pheromone BlpC;protein_id=TMR84390.1;transl_table=11 SOQV01000041.1 Genbank gene 183868 185208 . - . ID=gene-E3V42_04940;Name=E3V42_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04940 SOQV01000041.1 Protein Homology CDS 183868 185208 . - 0 ID=cds-TMR84391.1;Parent=gene-E3V42_04940;Dbxref=NCBI_GP:TMR84391.1;Name=TMR84391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358058.1;locus_tag=E3V42_04940;product=sensor histidine kinase;protein_id=TMR84391.1;transl_table=11 SOQV01000041.1 Genbank gene 185222 185959 . - . ID=gene-E3V42_04945;Name=E3V42_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04945 SOQV01000041.1 Protein Homology CDS 185222 185959 . - 0 ID=cds-TMR84392.1;Parent=gene-E3V42_04945;Dbxref=NCBI_GP:TMR84392.1;Name=TMR84392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358057.1;locus_tag=E3V42_04945;product=response regulator transcription factor;protein_id=TMR84392.1;transl_table=11 SOQV01000041.1 Genbank gene 185964 186302 . - . ID=gene-E3V42_04950;Name=E3V42_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04950 SOQV01000041.1 Protein Homology CDS 185964 186302 . - 0 ID=cds-TMR84393.1;Parent=gene-E3V42_04950;Dbxref=NCBI_GP:TMR84393.1;Name=TMR84393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445504.1;locus_tag=E3V42_04950;product=response regulator transcription factor;protein_id=TMR84393.1;transl_table=11 SOQV01000041.1 Genbank gene 186661 186912 . + . ID=gene-E3V42_04955;Name=E3V42_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04955 SOQV01000041.1 Protein Homology CDS 186661 186912 . + 0 ID=cds-TMR84394.1;Parent=gene-E3V42_04955;Dbxref=NCBI_GP:TMR84394.1;Name=TMR84394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130045.1;locus_tag=E3V42_04955;product=hypothetical protein;protein_id=TMR84394.1;transl_table=11 SOQV01000041.1 Genbank gene 186941 187264 . + . ID=gene-E3V42_04960;Name=E3V42_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04960 SOQV01000041.1 Protein Homology CDS 186941 187264 . + 0 ID=cds-TMR84395.1;Parent=gene-E3V42_04960;Dbxref=NCBI_GP:TMR84395.1;Name=TMR84395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399208.1;locus_tag=E3V42_04960;product=helicase BlpT;protein_id=TMR84395.1;transl_table=11 SOQV01000041.1 Genbank gene 187327 188376 . - . ID=gene-E3V42_04965;Name=E3V42_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04965 SOQV01000041.1 Protein Homology CDS 187327 188376 . - 0 ID=cds-TMR84396.1;Parent=gene-E3V42_04965;Dbxref=NCBI_GP:TMR84396.1;Name=TMR84396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358054.1;locus_tag=E3V42_04965;product=ABC transporter permease;protein_id=TMR84396.1;transl_table=11 SOQV01000041.1 Genbank gene 188373 189104 . - . ID=gene-E3V42_04970;Name=E3V42_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04970 SOQV01000041.1 Protein Homology CDS 188373 189104 . - 0 ID=cds-TMR84397.1;Parent=gene-E3V42_04970;Dbxref=NCBI_GP:TMR84397.1;Name=TMR84397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445501.1;locus_tag=E3V42_04970;product=ABC transporter ATP-binding protein;protein_id=TMR84397.1;transl_table=11 SOQV01000041.1 Genbank gene 189172 189582 . + . ID=gene-E3V42_04975;Name=E3V42_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04975 SOQV01000041.1 Protein Homology CDS 189172 189582 . + 0 ID=cds-TMR84398.1;Parent=gene-E3V42_04975;Dbxref=NCBI_GP:TMR84398.1;Name=TMR84398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445500.1;locus_tag=E3V42_04975;product=HIT family protein;protein_id=TMR84398.1;transl_table=11 SOQV01000041.1 Genbank gene 189592 189879 . + . ID=gene-E3V42_04980;Name=E3V42_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04980 SOQV01000041.1 Protein Homology CDS 189592 189879 . + 0 ID=cds-TMR84399.1;Parent=gene-E3V42_04980;Dbxref=NCBI_GP:TMR84399.1;Name=TMR84399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445499.1;locus_tag=E3V42_04980;product=hypothetical protein;protein_id=TMR84399.1;transl_table=11 SOQV01000041.1 Genbank gene 190560 191699 . - . ID=gene-E3V42_04985;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=E3V42_04985 SOQV01000041.1 Protein Homology CDS 190560 191699 . - 0 ID=cds-TMR84400.1;Parent=gene-E3V42_04985;Dbxref=NCBI_GP:TMR84400.1;Name=TMR84400.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445497.1;locus_tag=E3V42_04985;product=molecular chaperone DnaJ;protein_id=TMR84400.1;transl_table=11 SOQV01000041.1 Genbank gene 191978 192379 . - . ID=gene-E3V42_04990;Name=E3V42_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_04990 SOQV01000041.1 Protein Homology CDS 191978 192379 . - 0 ID=cds-TMR84401.1;Parent=gene-E3V42_04990;Dbxref=NCBI_GP:TMR84401.1;Name=TMR84401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114360.1;locus_tag=E3V42_04990;product=tRNA (guanine-N7)-methyltransferase;protein_id=TMR84401.1;transl_table=11 SOQV01000041.1 Genbank gene 192381 194204 . - . ID=gene-E3V42_04995;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=E3V42_04995 SOQV01000041.1 Protein Homology CDS 192381 194204 . - 0 ID=cds-TMR84402.1;Parent=gene-E3V42_04995;Dbxref=NCBI_GP:TMR84402.1;Name=TMR84402.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=E3V42_04995;product=molecular chaperone DnaK;protein_id=TMR84402.1;transl_table=11 SOQV01000041.1 Genbank gene 194571 195095 . - . ID=gene-E3V42_05000;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=E3V42_05000 SOQV01000041.1 Protein Homology CDS 194571 195095 . - 0 ID=cds-TMR84403.1;Parent=gene-E3V42_05000;Dbxref=NCBI_GP:TMR84403.1;Name=TMR84403.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445493.1;locus_tag=E3V42_05000;product=nucleotide exchange factor GrpE;protein_id=TMR84403.1;transl_table=11 SOQV01000041.1 Genbank gene 195122 196156 . - . ID=gene-E3V42_05005;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=E3V42_05005 SOQV01000041.1 Protein Homology CDS 195122 196156 . - 0 ID=cds-TMR84415.1;Parent=gene-E3V42_05005;Dbxref=NCBI_GP:TMR84415.1;Name=TMR84415.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445492.1;locus_tag=E3V42_05005;product=heat-inducible transcriptional repressor HrcA;protein_id=TMR84415.1;transl_table=11 SOQV01000041.1 Genbank gene 196317 196829 . - . ID=gene-E3V42_05010;Name=E3V42_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05010 SOQV01000041.1 Protein Homology CDS 196317 196829 . - 0 ID=cds-TMR84404.1;Parent=gene-E3V42_05010;Dbxref=NCBI_GP:TMR84404.1;Name=TMR84404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088699.1;locus_tag=E3V42_05010;product=DUF2812 domain-containing protein;protein_id=TMR84404.1;transl_table=11 SOQV01000041.1 Genbank gene 196864 197064 . - . ID=gene-E3V42_05015;Name=E3V42_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05015 SOQV01000041.1 Protein Homology CDS 196864 197064 . - 0 ID=cds-TMR84405.1;Parent=gene-E3V42_05015;Dbxref=NCBI_GP:TMR84405.1;Name=TMR84405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358045.1;locus_tag=E3V42_05015;product=hypothetical protein;protein_id=TMR84405.1;transl_table=11 SOQV01000041.1 Genbank gene 197437 199770 . + . ID=gene-E3V42_05020;Name=E3V42_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05020 SOQV01000041.1 Protein Homology CDS 197437 199770 . + 0 ID=cds-TMR84406.1;Parent=gene-E3V42_05020;Dbxref=NCBI_GP:TMR84406.1;Name=TMR84406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358044.1;locus_tag=E3V42_05020;product=DEAD/DEAH box helicase;protein_id=TMR84406.1;transl_table=11 SOQV01000041.1 Genbank gene 199783 201246 . + . ID=gene-E3V42_05025;Name=E3V42_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05025 SOQV01000041.1 Protein Homology CDS 199783 201246 . + 0 ID=cds-TMR84407.1;Parent=gene-E3V42_05025;Dbxref=NCBI_GP:TMR84407.1;Name=TMR84407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358043.1;locus_tag=E3V42_05025;product=SAM-dependent DNA methyltransferase;protein_id=TMR84407.1;transl_table=11 SOQV01000041.1 Genbank gene 201246 202107 . + . ID=gene-E3V42_05030;Name=E3V42_05030;end_range=202107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05030;partial=true SOQV01000041.1 Protein Homology CDS 201246 202107 . + 0 ID=cds-TMR84408.1;Parent=gene-E3V42_05030;Dbxref=NCBI_GP:TMR84408.1;Name=TMR84408.1;end_range=202107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155729.1;locus_tag=E3V42_05030;partial=true;product=restriction endonuclease subunit S;protein_id=TMR84408.1;transl_table=11 ##sequence-region SOQV01000042.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000042.1 Genbank region 1 795 . + . ID=SOQV01000042.1:1..795;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000042.1 Genbank gene 1 681 . - . ID=gene-E3V42_05035;Name=E3V42_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05035;partial=true;start_range=.,1 SOQV01000042.1 Protein Homology CDS 1 681 . - 0 ID=cds-TMR84194.1;Parent=gene-E3V42_05035;Dbxref=NCBI_GP:TMR84194.1;Name=TMR84194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_05035;partial=true;product=IS30 family transposase;protein_id=TMR84194.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000043.1 1 70832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000043.1 Genbank region 1 70832 . + . ID=SOQV01000043.1:1..70832;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000043.1 Genbank gene 369 521 . + . ID=gene-E3V42_05040;Name=E3V42_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05040 SOQV01000043.1 Protein Homology CDS 369 521 . + 0 ID=cds-TMR84158.1;Parent=gene-E3V42_05040;Dbxref=NCBI_GP:TMR84158.1;Name=TMR84158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V42_05040;product=transposase domain-containing protein;protein_id=TMR84158.1;transl_table=11 SOQV01000043.1 Genbank gene 991 5784 . + . ID=gene-E3V42_05045;Name=E3V42_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05045 SOQV01000043.1 Protein Homology CDS 991 5784 . + 0 ID=cds-TMR84096.1;Parent=gene-E3V42_05045;Dbxref=NCBI_GP:TMR84096.1;Name=TMR84096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446500.1;locus_tag=E3V42_05045;product=serine protease;protein_id=TMR84096.1;transl_table=11 SOQV01000043.1 Genbank gene 5994 6320 . + . ID=gene-E3V42_05050;Name=E3V42_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05050 SOQV01000043.1 Protein Homology CDS 5994 6320 . + 0 ID=cds-TMR84097.1;Parent=gene-E3V42_05050;Dbxref=NCBI_GP:TMR84097.1;Name=TMR84097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_05050;product=transposase;protein_id=TMR84097.1;transl_table=11 SOQV01000043.1 Genbank gene 6307 6747 . + . ID=gene-E3V42_05055;Name=E3V42_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05055 SOQV01000043.1 Protein Homology CDS 6307 6747 . + 0 ID=cds-TMR84098.1;Parent=gene-E3V42_05055;Dbxref=NCBI_GP:TMR84098.1;Name=TMR84098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_05055;product=transposase;protein_id=TMR84098.1;transl_table=11 SOQV01000043.1 Genbank gene 7049 7348 . - . ID=gene-E3V42_05060;Name=E3V42_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05060 SOQV01000043.1 Protein Homology CDS 7049 7348 . - 0 ID=cds-TMR84099.1;Parent=gene-E3V42_05060;Dbxref=NCBI_GP:TMR84099.1;Name=TMR84099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358314.1;locus_tag=E3V42_05060;product=DUF1827 family protein;protein_id=TMR84099.1;transl_table=11 SOQV01000043.1 Genbank gene 7559 8011 . - . ID=gene-E3V42_05065;Name=E3V42_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05065 SOQV01000043.1 Protein Homology CDS 7559 8011 . - 0 ID=cds-TMR84100.1;Parent=gene-E3V42_05065;Dbxref=NCBI_GP:TMR84100.1;Name=TMR84100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445980.1;locus_tag=E3V42_05065;product=NUDIX domain-containing protein;protein_id=TMR84100.1;transl_table=11 SOQV01000043.1 Genbank gene 8140 10398 . - . ID=gene-E3V42_05070;Name=E3V42_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05070 SOQV01000043.1 Protein Homology CDS 8140 10398 . - 0 ID=cds-TMR84101.1;Parent=gene-E3V42_05070;Dbxref=NCBI_GP:TMR84101.1;Name=TMR84101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445981.1;locus_tag=E3V42_05070;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR84101.1;transl_table=11 SOQV01000043.1 Genbank gene 10628 10858 . - . ID=gene-E3V42_05075;Name=E3V42_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05075 SOQV01000043.1 Protein Homology CDS 10628 10858 . - 0 ID=cds-TMR84102.1;Parent=gene-E3V42_05075;Dbxref=NCBI_GP:TMR84102.1;Name=TMR84102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003105222.1;locus_tag=E3V42_05075;product=DUF1797 family protein;protein_id=TMR84102.1;transl_table=11 SOQV01000043.1 Genbank gene 11049 11732 . + . ID=gene-E3V42_05080;Name=E3V42_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05080 SOQV01000043.1 Protein Homology CDS 11049 11732 . + 0 ID=cds-TMR84103.1;Parent=gene-E3V42_05080;Dbxref=NCBI_GP:TMR84103.1;Name=TMR84103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445983.1;locus_tag=E3V42_05080;product=amino acid ABC transporter permease;protein_id=TMR84103.1;transl_table=11 SOQV01000043.1 Genbank gene 11732 12466 . + . ID=gene-E3V42_05085;Name=E3V42_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05085 SOQV01000043.1 Protein Homology CDS 11732 12466 . + 0 ID=cds-TMR84104.1;Parent=gene-E3V42_05085;Dbxref=NCBI_GP:TMR84104.1;Name=TMR84104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445984.1;locus_tag=E3V42_05085;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR84104.1;transl_table=11 SOQV01000043.1 Genbank gene 12557 13477 . + . ID=gene-E3V42_05090;Name=E3V42_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05090 SOQV01000043.1 Protein Homology CDS 12557 13477 . + 0 ID=cds-TMR84159.1;Parent=gene-E3V42_05090;Dbxref=NCBI_GP:TMR84159.1;Name=TMR84159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358323.1;locus_tag=E3V42_05090;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=TMR84159.1;transl_table=11 SOQV01000043.1 Genbank gene 13618 14457 . + . ID=gene-E3V42_05095;Name=E3V42_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05095 SOQV01000043.1 Protein Homology CDS 13618 14457 . + 0 ID=cds-TMR84105.1;Parent=gene-E3V42_05095;Dbxref=NCBI_GP:TMR84105.1;Name=TMR84105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863087.1;locus_tag=E3V42_05095;product=NAD(P)H-hydrate dehydratase;protein_id=TMR84105.1;transl_table=11 SOQV01000043.1 Genbank gene 14755 15438 . + . ID=gene-E3V42_05100;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=E3V42_05100 SOQV01000043.1 Protein Homology CDS 14755 15438 . + 0 ID=cds-TMR84106.1;Parent=gene-E3V42_05100;Dbxref=NCBI_GP:TMR84106.1;Name=TMR84106.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445989.1;locus_tag=E3V42_05100;product=ribose-5-phosphate isomerase RpiA;protein_id=TMR84106.1;transl_table=11 SOQV01000043.1 Genbank gene 15462 16673 . + . ID=gene-E3V42_05105;Name=E3V42_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05105 SOQV01000043.1 Protein Homology CDS 15462 16673 . + 0 ID=cds-TMR84107.1;Parent=gene-E3V42_05105;Dbxref=NCBI_GP:TMR84107.1;Name=TMR84107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445990.1;locus_tag=E3V42_05105;product=phosphopentomutase;protein_id=TMR84107.1;transl_table=11 SOQV01000043.1 Genbank gene 16675 17235 . + . ID=gene-E3V42_05110;Name=E3V42_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05110 SOQV01000043.1 Protein Homology CDS 16675 17235 . + 0 ID=cds-TMR84108.1;Parent=gene-E3V42_05110;Dbxref=NCBI_GP:TMR84108.1;Name=TMR84108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445991.1;locus_tag=E3V42_05110;product=DUF1697 domain-containing protein;protein_id=TMR84108.1;transl_table=11 SOQV01000043.1 Genbank gene 17232 18041 . + . ID=gene-E3V42_05115;Name=E3V42_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05115 SOQV01000043.1 Protein Homology CDS 17232 18041 . + 0 ID=cds-TMR84109.1;Parent=gene-E3V42_05115;Dbxref=NCBI_GP:TMR84109.1;Name=TMR84109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445992.1;locus_tag=E3V42_05115;product=purine-nucleoside phosphorylase;protein_id=TMR84109.1;transl_table=11 SOQV01000043.1 Genbank gene 18244 18489 . + . ID=gene-E3V42_05120;Name=E3V42_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05120 SOQV01000043.1 Protein Homology CDS 18244 18489 . + 0 ID=cds-TMR84110.1;Parent=gene-E3V42_05120;Dbxref=NCBI_GP:TMR84110.1;Name=TMR84110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=E3V42_05120;product=hypothetical protein;protein_id=TMR84110.1;transl_table=11 SOQV01000043.1 Genbank gene 18496 21243 . + . ID=gene-E3V42_05125;Name=E3V42_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05125 SOQV01000043.1 Protein Homology CDS 18496 21243 . + 0 ID=cds-TMR84111.1;Parent=gene-E3V42_05125;Dbxref=NCBI_GP:TMR84111.1;Name=TMR84111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690148.1;locus_tag=E3V42_05125;product=YSIRK-type signal peptide-containing protein;protein_id=TMR84111.1;transl_table=11 SOQV01000043.1 Genbank pseudogene 21347 21421 . + . ID=gene-E3V42_05130;Name=E3V42_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05130;pseudo=true SOQV01000043.1 Protein Homology CDS 21347 21421 . + 0 ID=cds-E3V42_05130;Parent=gene-E3V42_05130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=E3V42_05130;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000043.1 Genbank pseudogene 21988 22178 . - . ID=gene-E3V42_05135;Name=E3V42_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05135;pseudo=true SOQV01000043.1 Protein Homology CDS 21988 22178 . - 0 ID=cds-E3V42_05135;Parent=gene-E3V42_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845794.1;locus_tag=E3V42_05135;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000043.1 Genbank gene 22184 22894 . + . ID=gene-E3V42_05140;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=E3V42_05140 SOQV01000043.1 Protein Homology CDS 22184 22894 . + 0 ID=cds-TMR84112.1;Parent=gene-E3V42_05140;Dbxref=NCBI_GP:TMR84112.1;Name=TMR84112.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445995.1;locus_tag=E3V42_05140;product=purine-nucleoside phosphorylase;protein_id=TMR84112.1;transl_table=11 SOQV01000043.1 Genbank gene 22920 23444 . - . ID=gene-E3V42_05145;Name=E3V42_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05145 SOQV01000043.1 Protein Homology CDS 22920 23444 . - 0 ID=cds-TMR84113.1;Parent=gene-E3V42_05145;Dbxref=NCBI_GP:TMR84113.1;Name=TMR84113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358333.1;locus_tag=E3V42_05145;product=DNA topology modulation protein;protein_id=TMR84113.1;transl_table=11 SOQV01000043.1 Genbank gene 23497 23733 . - . ID=gene-E3V42_05150;Name=E3V42_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05150 SOQV01000043.1 Protein Homology CDS 23497 23733 . - 0 ID=cds-TMR84114.1;Parent=gene-E3V42_05150;Dbxref=NCBI_GP:TMR84114.1;Name=TMR84114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358334.2;locus_tag=E3V42_05150;product=30S ribosomal protein S20;protein_id=TMR84114.1;transl_table=11 SOQV01000043.1 Genbank gene 23801 24721 . - . ID=gene-E3V42_05155;Name=E3V42_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05155 SOQV01000043.1 Protein Homology CDS 23801 24721 . - 0 ID=cds-TMR84115.1;Parent=gene-E3V42_05155;Dbxref=NCBI_GP:TMR84115.1;Name=TMR84115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445999.1;locus_tag=E3V42_05155;product=type I pantothenate kinase;protein_id=TMR84115.1;transl_table=11 SOQV01000043.1 Genbank gene 24921 25325 . + . ID=gene-E3V42_05160;Name=E3V42_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05160 SOQV01000043.1 Protein Homology CDS 24921 25325 . + 0 ID=cds-TMR84116.1;Parent=gene-E3V42_05160;Dbxref=NCBI_GP:TMR84116.1;Name=TMR84116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446000.1;locus_tag=E3V42_05160;product=hypothetical protein;protein_id=TMR84116.1;transl_table=11 SOQV01000043.1 Genbank gene 25534 26124 . + . ID=gene-E3V42_05165;Name=E3V42_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05165 SOQV01000043.1 Protein Homology CDS 25534 26124 . + 0 ID=cds-TMR84117.1;Parent=gene-E3V42_05165;Dbxref=NCBI_GP:TMR84117.1;Name=TMR84117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446003.1;locus_tag=E3V42_05165;product=class I SAM-dependent methyltransferase;protein_id=TMR84117.1;transl_table=11 SOQV01000043.1 Genbank gene 26121 27398 . + . ID=gene-E3V42_05170;Name=E3V42_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05170 SOQV01000043.1 Protein Homology CDS 26121 27398 . + 0 ID=cds-TMR84118.1;Parent=gene-E3V42_05170;Dbxref=NCBI_GP:TMR84118.1;Name=TMR84118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446004.1;locus_tag=E3V42_05170;product=pyrimidine-nucleoside phosphorylase;protein_id=TMR84118.1;transl_table=11 SOQV01000043.1 Genbank gene 27418 28080 . + . ID=gene-E3V42_05175;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=E3V42_05175 SOQV01000043.1 Protein Homology CDS 27418 28080 . + 0 ID=cds-TMR84119.1;Parent=gene-E3V42_05175;Dbxref=NCBI_GP:TMR84119.1;Name=TMR84119.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358339.1;locus_tag=E3V42_05175;product=deoxyribose-phosphate aldolase;protein_id=TMR84119.1;transl_table=11 SOQV01000043.1 Genbank gene 28067 28456 . + . ID=gene-E3V42_05180;Name=E3V42_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05180 SOQV01000043.1 Protein Homology CDS 28067 28456 . + 0 ID=cds-TMR84120.1;Parent=gene-E3V42_05180;Dbxref=NCBI_GP:TMR84120.1;Name=TMR84120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358340.1;locus_tag=E3V42_05180;product=cytidine deaminase;protein_id=TMR84120.1;transl_table=11 SOQV01000043.1 Genbank gene 28546 29601 . + . ID=gene-E3V42_05185;Name=E3V42_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05185 SOQV01000043.1 Protein Homology CDS 28546 29601 . + 0 ID=cds-TMR84121.1;Parent=gene-E3V42_05185;Dbxref=NCBI_GP:TMR84121.1;Name=TMR84121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446007.1;locus_tag=E3V42_05185;product=BMP family ABC transporter substrate-binding protein;protein_id=TMR84121.1;transl_table=11 SOQV01000043.1 Genbank gene 29745 31280 . + . ID=gene-E3V42_05190;Name=E3V42_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05190 SOQV01000043.1 Protein Homology CDS 29745 31280 . + 0 ID=cds-TMR84122.1;Parent=gene-E3V42_05190;Dbxref=NCBI_GP:TMR84122.1;Name=TMR84122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446008.1;locus_tag=E3V42_05190;product=ABC transporter ATP-binding protein;protein_id=TMR84122.1;transl_table=11 SOQV01000043.1 Genbank gene 31273 32331 . + . ID=gene-E3V42_05195;Name=E3V42_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05195 SOQV01000043.1 Protein Homology CDS 31273 32331 . + 0 ID=cds-TMR84123.1;Parent=gene-E3V42_05195;Dbxref=NCBI_GP:TMR84123.1;Name=TMR84123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446009.1;locus_tag=E3V42_05195;product=ABC transporter permease;protein_id=TMR84123.1;transl_table=11 SOQV01000043.1 Genbank gene 32334 33290 . + . ID=gene-E3V42_05200;Name=E3V42_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05200 SOQV01000043.1 Protein Homology CDS 32334 33290 . + 0 ID=cds-TMR84124.1;Parent=gene-E3V42_05200;Dbxref=NCBI_GP:TMR84124.1;Name=TMR84124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446010.1;locus_tag=E3V42_05200;product=ABC transporter permease;protein_id=TMR84124.1;transl_table=11 SOQV01000043.1 Genbank gene 33324 33965 . - . ID=gene-E3V42_05205;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=E3V42_05205 SOQV01000043.1 Protein Homology CDS 33324 33965 . - 0 ID=cds-TMR84125.1;Parent=gene-E3V42_05205;Dbxref=NCBI_GP:TMR84125.1;Name=TMR84125.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446011.1;locus_tag=E3V42_05205;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=TMR84125.1;transl_table=11 SOQV01000043.1 Genbank gene 34101 36044 . + . ID=gene-E3V42_05210;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=E3V42_05210 SOQV01000043.1 Protein Homology CDS 34101 36044 . + 0 ID=cds-TMR84126.1;Parent=gene-E3V42_05210;Dbxref=NCBI_GP:TMR84126.1;Name=TMR84126.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358350.1;locus_tag=E3V42_05210;product=DNA topoisomerase IV subunit B;protein_id=TMR84126.1;transl_table=11 SOQV01000043.1 Genbank gene 36059 38086 . + . ID=gene-E3V42_05215;Name=E3V42_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05215 SOQV01000043.1 Protein Homology CDS 36059 38086 . + 0 ID=cds-TMR84127.1;Parent=gene-E3V42_05215;Dbxref=NCBI_GP:TMR84127.1;Name=TMR84127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014166.1;locus_tag=E3V42_05215;product=SAM-dependent DNA methyltransferase;protein_id=TMR84127.1;transl_table=11 SOQV01000043.1 Genbank gene 38104 39225 . + . ID=gene-E3V42_05220;Name=E3V42_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05220 SOQV01000043.1 Protein Homology CDS 38104 39225 . + 0 ID=cds-TMR84128.1;Parent=gene-E3V42_05220;Dbxref=NCBI_GP:TMR84128.1;Name=TMR84128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=E3V42_05220;product=restriction endonuclease subunit S;protein_id=TMR84128.1;transl_table=11 SOQV01000043.1 Genbank gene 39375 39716 . + . ID=gene-E3V42_05225;Name=E3V42_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05225 SOQV01000043.1 Protein Homology CDS 39375 39716 . + 0 ID=cds-TMR84129.1;Parent=gene-E3V42_05225;Dbxref=NCBI_GP:TMR84129.1;Name=TMR84129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247490.1;locus_tag=E3V42_05225;product=hypothetical protein;protein_id=TMR84129.1;transl_table=11 SOQV01000043.1 Genbank gene 39729 40331 . + . ID=gene-E3V42_05230;Name=E3V42_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05230 SOQV01000043.1 Protein Homology CDS 39729 40331 . + 0 ID=cds-TMR84130.1;Parent=gene-E3V42_05230;Dbxref=NCBI_GP:TMR84130.1;Name=TMR84130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002395946.1;locus_tag=E3V42_05230;product=cell filamentation protein Fic;protein_id=TMR84130.1;transl_table=11 SOQV01000043.1 Genbank gene 40396 41223 . + . ID=gene-E3V42_05235;Name=ant(6);gbkey=Gene;gene=ant(6);gene_biotype=protein_coding;locus_tag=E3V42_05235 SOQV01000043.1 Protein Homology CDS 40396 41223 . + 0 ID=cds-TMR84131.1;Parent=gene-E3V42_05235;Dbxref=NCBI_GP:TMR84131.1;Name=TMR84131.1;gbkey=CDS;gene=ant(6);inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148702.1;locus_tag=E3V42_05235;product=aminoglycoside 6-adenylyltransferase;protein_id=TMR84131.1;transl_table=11 SOQV01000043.1 Genbank gene 41274 42443 . + . ID=gene-E3V42_05240;Name=E3V42_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05240 SOQV01000043.1 Protein Homology CDS 41274 42443 . + 0 ID=cds-TMR84132.1;Parent=gene-E3V42_05240;Dbxref=NCBI_GP:TMR84132.1;Name=TMR84132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148697.1;locus_tag=E3V42_05240;product=hypothetical protein;protein_id=TMR84132.1;transl_table=11 SOQV01000043.1 Genbank gene 42701 45172 . + . ID=gene-E3V42_05245;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=E3V42_05245 SOQV01000043.1 Protein Homology CDS 42701 45172 . + 0 ID=cds-TMR84133.1;Parent=gene-E3V42_05245;Dbxref=NCBI_GP:TMR84133.1;Name=TMR84133.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446019.1;locus_tag=E3V42_05245;product=DNA topoisomerase IV subunit A;protein_id=TMR84133.1;transl_table=11 SOQV01000043.1 Genbank gene 45307 46329 . + . ID=gene-E3V42_05250;Name=E3V42_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05250 SOQV01000043.1 Protein Homology CDS 45307 46329 . + 0 ID=cds-TMR84134.1;Parent=gene-E3V42_05250;Dbxref=NCBI_GP:TMR84134.1;Name=TMR84134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446020.1;locus_tag=E3V42_05250;product=branched-chain amino acid aminotransferase;protein_id=TMR84134.1;transl_table=11 SOQV01000043.1 Genbank pseudogene 46352 48316 . + . ID=gene-E3V42_05255;Name=E3V42_05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05255;pseudo=true SOQV01000043.1 Protein Homology CDS 46352 48316 . + 0 ID=cds-E3V42_05255;Parent=gene-E3V42_05255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446021.1;locus_tag=E3V42_05255;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQV01000043.1 Genbank gene 48360 49070 . + . ID=gene-E3V42_05260;Name=E3V42_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05260 SOQV01000043.1 Protein Homology CDS 48360 49070 . + 0 ID=cds-TMR84135.1;Parent=gene-E3V42_05260;Dbxref=NCBI_GP:TMR84135.1;Name=TMR84135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358354.1;locus_tag=E3V42_05260;product=DUF969 domain-containing protein;protein_id=TMR84135.1;transl_table=11 SOQV01000043.1 Genbank gene 49067 49990 . + . ID=gene-E3V42_05265;Name=E3V42_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05265 SOQV01000043.1 Protein Homology CDS 49067 49990 . + 0 ID=cds-TMR84136.1;Parent=gene-E3V42_05265;Dbxref=NCBI_GP:TMR84136.1;Name=TMR84136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358355.1;locus_tag=E3V42_05265;product=DUF979 domain-containing protein;protein_id=TMR84136.1;transl_table=11 SOQV01000043.1 Genbank gene 50005 50649 . + . ID=gene-E3V42_05270;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=E3V42_05270 SOQV01000043.1 Protein Homology CDS 50005 50649 . + 0 ID=cds-TMR84137.1;Parent=gene-E3V42_05270;Dbxref=NCBI_GP:TMR84137.1;Name=TMR84137.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358356.1;locus_tag=E3V42_05270;product=pyroglutamyl-peptidase I;protein_id=TMR84137.1;transl_table=11 SOQV01000043.1 Genbank gene 50817 51047 . + . ID=gene-E3V42_05275;Name=E3V42_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05275 SOQV01000043.1 Protein Homology CDS 50817 51047 . + 0 ID=cds-TMR84138.1;Parent=gene-E3V42_05275;Dbxref=NCBI_GP:TMR84138.1;Name=TMR84138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358357.1;locus_tag=E3V42_05275;product=DUF2969 domain-containing protein;protein_id=TMR84138.1;transl_table=11 SOQV01000043.1 Genbank gene 51097 51177 . + . ID=gene-E3V42_05280;Name=E3V42_05280;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_05280 SOQV01000043.1 tRNAscan-SE tRNA 51097 51177 . + . ID=rna-E3V42_05280;Parent=gene-E3V42_05280;anticodon=(pos:51131..51133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05280;product=tRNA-Tyr SOQV01000043.1 tRNAscan-SE exon 51097 51177 . + . ID=exon-E3V42_05280-1;Parent=rna-E3V42_05280;anticodon=(pos:51131..51133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05280;product=tRNA-Tyr SOQV01000043.1 Genbank gene 51187 51258 . + . ID=gene-E3V42_05285;Name=E3V42_05285;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_05285 SOQV01000043.1 tRNAscan-SE tRNA 51187 51258 . + . ID=rna-E3V42_05285;Parent=gene-E3V42_05285;anticodon=(pos:51219..51221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05285;product=tRNA-Gln SOQV01000043.1 tRNAscan-SE exon 51187 51258 . + . ID=exon-E3V42_05285-1;Parent=rna-E3V42_05285;anticodon=(pos:51219..51221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05285;product=tRNA-Gln SOQV01000043.1 Genbank gene 51421 52623 . + . ID=gene-E3V42_05290;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=E3V42_05290 SOQV01000043.1 Protein Homology CDS 51421 52623 . + 0 ID=cds-TMR84139.1;Parent=gene-E3V42_05290;Dbxref=NCBI_GP:TMR84139.1;Name=TMR84139.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=E3V42_05290;product=30S ribosomal protein S1;protein_id=TMR84139.1;transl_table=11 SOQV01000043.1 Genbank gene 52710 53207 . + . ID=gene-E3V42_05295;Name=E3V42_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05295 SOQV01000043.1 Protein Homology CDS 52710 53207 . + 0 ID=cds-TMR84140.1;Parent=gene-E3V42_05295;Dbxref=NCBI_GP:TMR84140.1;Name=TMR84140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358362.1;locus_tag=E3V42_05295;product=GAF domain-containing protein;protein_id=TMR84140.1;transl_table=11 SOQV01000043.1 Genbank gene 53207 54862 . + . ID=gene-E3V42_05300;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=E3V42_05300 SOQV01000043.1 Protein Homology CDS 53207 54862 . + 0 ID=cds-TMR84141.1;Parent=gene-E3V42_05300;Dbxref=NCBI_GP:TMR84141.1;Name=TMR84141.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358363.1;locus_tag=E3V42_05300;product=DNA polymerase III subunit gamma/tau;protein_id=TMR84141.1;transl_table=11 SOQV01000043.1 Genbank gene 54890 55084 . + . ID=gene-E3V42_05305;Name=E3V42_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05305 SOQV01000043.1 Protein Homology CDS 54890 55084 . + 0 ID=cds-TMR84142.1;Parent=gene-E3V42_05305;Dbxref=NCBI_GP:TMR84142.1;Name=TMR84142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358364.1;locus_tag=E3V42_05305;product=DUF3272 family protein;protein_id=TMR84142.1;transl_table=11 SOQV01000043.1 Genbank gene 55162 55248 . + . ID=gene-E3V42_05310;Name=E3V42_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05310 SOQV01000043.1 Protein Homology CDS 55162 55248 . + 0 ID=cds-TMR84160.1;Parent=gene-E3V42_05310;Dbxref=NCBI_GP:TMR84160.1;Name=TMR84160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_05310;product=DNA alkylation repair protein;protein_id=TMR84160.1;transl_table=11 SOQV01000043.1 Genbank gene 55349 56119 . + . ID=gene-E3V42_05315;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=E3V42_05315 SOQV01000043.1 Protein Homology CDS 55349 56119 . + 0 ID=cds-TMR84143.1;Parent=gene-E3V42_05315;Dbxref=NCBI_GP:TMR84143.1;Name=TMR84143.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446027.1;locus_tag=E3V42_05315;product=Fe-S cluster assembly ATPase SufC;protein_id=TMR84143.1;transl_table=11 SOQV01000043.1 Genbank gene 56147 57409 . + . ID=gene-E3V42_05320;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=E3V42_05320 SOQV01000043.1 Protein Homology CDS 56147 57409 . + 0 ID=cds-TMR84144.1;Parent=gene-E3V42_05320;Dbxref=NCBI_GP:TMR84144.1;Name=TMR84144.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446028.1;locus_tag=E3V42_05320;product=Fe-S cluster assembly protein SufD;protein_id=TMR84144.1;transl_table=11 SOQV01000043.1 Genbank gene 57420 58646 . + . ID=gene-E3V42_05325;Name=E3V42_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05325 SOQV01000043.1 Protein Homology CDS 57420 58646 . + 0 ID=cds-TMR84145.1;Parent=gene-E3V42_05325;Dbxref=NCBI_GP:TMR84145.1;Name=TMR84145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446029.1;locus_tag=E3V42_05325;product=cysteine desulfurase;protein_id=TMR84145.1;transl_table=11 SOQV01000043.1 Genbank gene 58633 59073 . + . ID=gene-E3V42_05330;Name=E3V42_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05330 SOQV01000043.1 Protein Homology CDS 58633 59073 . + 0 ID=cds-TMR84146.1;Parent=gene-E3V42_05330;Dbxref=NCBI_GP:TMR84146.1;Name=TMR84146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358368.1;locus_tag=E3V42_05330;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=TMR84146.1;transl_table=11 SOQV01000043.1 Genbank gene 59131 60543 . + . ID=gene-E3V42_05335;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=E3V42_05335 SOQV01000043.1 Protein Homology CDS 59131 60543 . + 0 ID=cds-TMR84147.1;Parent=gene-E3V42_05335;Dbxref=NCBI_GP:TMR84147.1;Name=TMR84147.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446031.1;locus_tag=E3V42_05335;product=Fe-S cluster assembly protein SufB;protein_id=TMR84147.1;transl_table=11 SOQV01000043.1 Genbank gene 60771 62012 . - . ID=gene-E3V42_05340;Name=E3V42_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05340 SOQV01000043.1 Protein Homology CDS 60771 62012 . - 0 ID=cds-TMR84148.1;Parent=gene-E3V42_05340;Dbxref=NCBI_GP:TMR84148.1;Name=TMR84148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358370.1;locus_tag=E3V42_05340;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMR84148.1;transl_table=11 SOQV01000043.1 Genbank gene 62115 63224 . + . ID=gene-E3V42_05345;Name=E3V42_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05345 SOQV01000043.1 Protein Homology CDS 62115 63224 . + 0 ID=cds-TMR84149.1;Parent=gene-E3V42_05345;Dbxref=NCBI_GP:TMR84149.1;Name=TMR84149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358371.1;locus_tag=E3V42_05345;product=AI-2E family transporter;protein_id=TMR84149.1;transl_table=11 SOQV01000043.1 Genbank gene 63871 64218 . + . ID=gene-E3V42_05350;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=E3V42_05350 SOQV01000043.1 cmsearch tmRNA 63871 64218 . + . ID=rna-E3V42_05350;Parent=gene-E3V42_05350;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_05350;product=transfer-messenger RNA SOQV01000043.1 cmsearch exon 63871 64218 . + . ID=exon-E3V42_05350-1;Parent=rna-E3V42_05350;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_05350;product=transfer-messenger RNA SOQV01000043.1 Genbank gene 64466 65242 . - . ID=gene-E3V42_05355;Name=E3V42_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05355 SOQV01000043.1 Protein Homology CDS 64466 65242 . - 0 ID=cds-TMR84150.1;Parent=gene-E3V42_05355;Dbxref=NCBI_GP:TMR84150.1;Name=TMR84150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739744.1;locus_tag=E3V42_05355;product=DUF1828 domain-containing protein;protein_id=TMR84150.1;transl_table=11 SOQV01000043.1 Genbank gene 65269 65739 . - . ID=gene-E3V42_05360;Name=E3V42_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05360 SOQV01000043.1 Protein Homology CDS 65269 65739 . - 0 ID=cds-TMR84151.1;Parent=gene-E3V42_05360;Dbxref=NCBI_GP:TMR84151.1;Name=TMR84151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740293.1;locus_tag=E3V42_05360;product=hypothetical protein;protein_id=TMR84151.1;transl_table=11 SOQV01000043.1 Genbank gene 65794 66258 . - . ID=gene-E3V42_05365;Name=E3V42_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05365 SOQV01000043.1 Protein Homology CDS 65794 66258 . - 0 ID=cds-TMR84152.1;Parent=gene-E3V42_05365;Dbxref=NCBI_GP:TMR84152.1;Name=TMR84152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049399.1;locus_tag=E3V42_05365;product=TM2 domain-containing protein;protein_id=TMR84152.1;transl_table=11 SOQV01000043.1 Genbank gene 66614 66701 . - . ID=gene-E3V42_05370;Name=E3V42_05370;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_05370 SOQV01000043.1 tRNAscan-SE tRNA 66614 66701 . - . ID=rna-E3V42_05370;Parent=gene-E3V42_05370;anticodon=(pos:complement(66665..66667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05370;product=tRNA-Ser SOQV01000043.1 tRNAscan-SE exon 66614 66701 . - . ID=exon-E3V42_05370-1;Parent=rna-E3V42_05370;anticodon=(pos:complement(66665..66667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05370;product=tRNA-Ser SOQV01000043.1 Genbank gene 66863 67603 . + . ID=gene-E3V42_05375;Name=E3V42_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05375 SOQV01000043.1 Protein Homology CDS 66863 67603 . + 0 ID=cds-TMR84153.1;Parent=gene-E3V42_05375;Dbxref=NCBI_GP:TMR84153.1;Name=TMR84153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358372.1;locus_tag=E3V42_05375;product=DeoR/GlpR transcriptional regulator;protein_id=TMR84153.1;transl_table=11 SOQV01000043.1 Genbank gene 67600 68511 . + . ID=gene-E3V42_05380;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=E3V42_05380 SOQV01000043.1 Protein Homology CDS 67600 68511 . + 0 ID=cds-TMR84154.1;Parent=gene-E3V42_05380;Dbxref=NCBI_GP:TMR84154.1;Name=TMR84154.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358373.1;locus_tag=E3V42_05380;product=1-phosphofructokinase;protein_id=TMR84154.1;transl_table=11 SOQV01000043.1 Genbank gene 68508 70460 . + . ID=gene-E3V42_05385;Name=E3V42_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05385 SOQV01000043.1 Protein Homology CDS 68508 70460 . + 0 ID=cds-TMR84155.1;Parent=gene-E3V42_05385;Dbxref=NCBI_GP:TMR84155.1;Name=TMR84155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446465.1;locus_tag=E3V42_05385;product=PTS fructose transporter subunit IIC;protein_id=TMR84155.1;transl_table=11 SOQV01000043.1 Genbank gene 70475 70705 . + . ID=gene-E3V42_05390;Name=E3V42_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05390 SOQV01000043.1 Protein Homology CDS 70475 70705 . + 0 ID=cds-TMR84156.1;Parent=gene-E3V42_05390;Dbxref=NCBI_GP:TMR84156.1;Name=TMR84156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826368.1;locus_tag=E3V42_05390;product=hypothetical protein;protein_id=TMR84156.1;transl_table=11 SOQV01000043.1 Genbank gene 70613 70832 . - . ID=gene-E3V42_05395;Name=E3V42_05395;end_range=70832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05395;partial=true SOQV01000043.1 Protein Homology CDS 70613 70832 . - 1 ID=cds-TMR84157.1;Parent=gene-E3V42_05395;Dbxref=NCBI_GP:TMR84157.1;Name=TMR84157.1;end_range=70832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142808.1;locus_tag=E3V42_05395;partial=true;product=IS1634 family transposase;protein_id=TMR84157.1;transl_table=11 ##sequence-region SOQV01000044.1 1 1599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000044.1 Genbank region 1 1599 . + . ID=SOQV01000044.1:1..1599;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000044.1 Genbank gene 1 1599 . - . ID=gene-E3V42_05400;Name=E3V42_05400;end_range=1599,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05400;partial=true;start_range=.,1 SOQV01000044.1 Protein Homology CDS 1 1599 . - 0 ID=cds-TMR84086.1;Parent=gene-E3V42_05400;Dbxref=NCBI_GP:TMR84086.1;Name=TMR84086.1;end_range=1599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677262.1;locus_tag=E3V42_05400;partial=true;product=IS1634 family transposase;protein_id=TMR84086.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000045.1 1 83238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000045.1 Genbank region 1 83238 . + . ID=SOQV01000045.1:1..83238;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000045.1 Genbank gene 415 1122 . + . ID=gene-E3V42_05405;Name=E3V42_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05405 SOQV01000045.1 Protein Homology CDS 415 1122 . + 0 ID=cds-TMR84007.1;Parent=gene-E3V42_05405;Dbxref=NCBI_GP:TMR84007.1;Name=TMR84007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446338.1;locus_tag=E3V42_05405;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TMR84007.1;transl_table=11 SOQV01000045.1 Genbank gene 1127 2149 . + . ID=gene-E3V42_05410;Name=E3V42_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05410 SOQV01000045.1 Protein Homology CDS 1127 2149 . + 0 ID=cds-TMR84008.1;Parent=gene-E3V42_05410;Dbxref=NCBI_GP:TMR84008.1;Name=TMR84008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446337.1;locus_tag=E3V42_05410;product=ribitol-5-phosphate dehydrogenase;protein_id=TMR84008.1;transl_table=11 SOQV01000045.1 Genbank gene 2166 3035 . + . ID=gene-E3V42_05415;Name=E3V42_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05415 SOQV01000045.1 Protein Homology CDS 2166 3035 . + 0 ID=cds-TMR84009.1;Parent=gene-E3V42_05415;Dbxref=NCBI_GP:TMR84009.1;Name=TMR84009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358740.1;locus_tag=E3V42_05415;product=choline kinase;protein_id=TMR84009.1;transl_table=11 SOQV01000045.1 Genbank gene 3025 3903 . + . ID=gene-E3V42_05420;Name=E3V42_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05420 SOQV01000045.1 Protein Homology CDS 3025 3903 . + 0 ID=cds-TMR84010.1;Parent=gene-E3V42_05420;Dbxref=NCBI_GP:TMR84010.1;Name=TMR84010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446335.1;locus_tag=E3V42_05420;product=DMT family transporter;protein_id=TMR84010.1;transl_table=11 SOQV01000045.1 Genbank gene 3915 4604 . + . ID=gene-E3V42_05425;Name=E3V42_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05425 SOQV01000045.1 Protein Homology CDS 3915 4604 . + 0 ID=cds-TMR84011.1;Parent=gene-E3V42_05425;Dbxref=NCBI_GP:TMR84011.1;Name=TMR84011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446334.1;locus_tag=E3V42_05425;product=CTP--phosphocholine cytidylyltransferase;protein_id=TMR84011.1;transl_table=11 SOQV01000045.1 Genbank gene 4702 5550 . + . ID=gene-E3V42_05430;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=E3V42_05430 SOQV01000045.1 Protein Homology CDS 4702 5550 . + 0 ID=cds-TMR84012.1;Parent=gene-E3V42_05430;Dbxref=NCBI_GP:TMR84012.1;Name=TMR84012.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446333.1;locus_tag=E3V42_05430;product=DNA-protecting protein DprA;protein_id=TMR84012.1;transl_table=11 SOQV01000045.1 Genbank gene 6320 7363 . + . ID=gene-E3V42_05435;Name=E3V42_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05435 SOQV01000045.1 Protein Homology CDS 6320 7363 . + 0 ID=cds-TMR84013.1;Parent=gene-E3V42_05435;Dbxref=NCBI_GP:TMR84013.1;Name=TMR84013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358735.1;locus_tag=E3V42_05435;product=TIGR00341 family protein;protein_id=TMR84013.1;transl_table=11 SOQV01000045.1 Genbank gene 7529 9616 . + . ID=gene-E3V42_05440;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=E3V42_05440 SOQV01000045.1 Protein Homology CDS 7529 9616 . + 0 ID=cds-TMR84014.1;Parent=gene-E3V42_05440;Dbxref=NCBI_GP:TMR84014.1;Name=TMR84014.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446332.1;locus_tag=E3V42_05440;product=type I DNA topoisomerase;protein_id=TMR84014.1;transl_table=11 SOQV01000045.1 Genbank gene 9722 10081 . + . ID=gene-E3V42_05445;Name=E3V42_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05445 SOQV01000045.1 Protein Homology CDS 9722 10081 . + 0 ID=cds-TMR84015.1;Parent=gene-E3V42_05445;Dbxref=NCBI_GP:TMR84015.1;Name=TMR84015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446331.1;locus_tag=E3V42_05445;product=DUF454 domain-containing protein;protein_id=TMR84015.1;transl_table=11 SOQV01000045.1 Genbank gene 10175 10807 . + . ID=gene-E3V42_05450;Name=E3V42_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05450 SOQV01000045.1 Protein Homology CDS 10175 10807 . + 0 ID=cds-TMR84016.1;Parent=gene-E3V42_05450;Dbxref=NCBI_GP:TMR84016.1;Name=TMR84016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358732.1;locus_tag=E3V42_05450;product=copper homeostasis protein CutC;protein_id=TMR84016.1;transl_table=11 SOQV01000045.1 Genbank gene 10851 11507 . + . ID=gene-E3V42_05455;Name=E3V42_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05455 SOQV01000045.1 Protein Homology CDS 10851 11507 . + 0 ID=cds-TMR84017.1;Parent=gene-E3V42_05455;Dbxref=NCBI_GP:TMR84017.1;Name=TMR84017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446329.1;locus_tag=E3V42_05455;product=MmcQ/YjbR family DNA-binding protein;protein_id=TMR84017.1;transl_table=11 SOQV01000045.1 Genbank gene 11822 13384 . + . ID=gene-E3V42_05460;Name=E3V42_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05460 SOQV01000045.1 Protein Homology CDS 11822 13384 . + 0 ID=cds-TMR84018.1;Parent=gene-E3V42_05460;Dbxref=NCBI_GP:TMR84018.1;Name=TMR84018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446328.1;locus_tag=E3V42_05460;product=2-isopropylmalate synthase;protein_id=TMR84018.1;transl_table=11 SOQV01000045.1 Genbank gene 13396 14433 . + . ID=gene-E3V42_05465;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=E3V42_05465 SOQV01000045.1 Protein Homology CDS 13396 14433 . + 0 ID=cds-TMR84019.1;Parent=gene-E3V42_05465;Dbxref=NCBI_GP:TMR84019.1;Name=TMR84019.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446327.1;locus_tag=E3V42_05465;product=3-isopropylmalate dehydrogenase;protein_id=TMR84019.1;transl_table=11 SOQV01000045.1 Genbank gene 14430 14699 . + . ID=gene-E3V42_05470;Name=E3V42_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05470 SOQV01000045.1 Protein Homology CDS 14430 14699 . + 0 ID=cds-TMR84020.1;Parent=gene-E3V42_05470;Dbxref=NCBI_GP:TMR84020.1;Name=TMR84020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358727.1;locus_tag=E3V42_05470;product=DUF1294 domain-containing protein;protein_id=TMR84020.1;transl_table=11 SOQV01000045.1 Genbank gene 14703 16085 . + . ID=gene-E3V42_05475;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=E3V42_05475 SOQV01000045.1 Protein Homology CDS 14703 16085 . + 0 ID=cds-TMR84021.1;Parent=gene-E3V42_05475;Dbxref=NCBI_GP:TMR84021.1;Name=TMR84021.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446325.1;locus_tag=E3V42_05475;product=3-isopropylmalate dehydratase large subunit;protein_id=TMR84021.1;transl_table=11 SOQV01000045.1 Genbank gene 16095 16688 . + . ID=gene-E3V42_05480;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=E3V42_05480 SOQV01000045.1 Protein Homology CDS 16095 16688 . + 0 ID=cds-TMR84022.1;Parent=gene-E3V42_05480;Dbxref=NCBI_GP:TMR84022.1;Name=TMR84022.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446324.1;locus_tag=E3V42_05480;product=3-isopropylmalate dehydratase small subunit;protein_id=TMR84022.1;transl_table=11 SOQV01000045.1 Genbank gene 16716 17495 . + . ID=gene-E3V42_05485;Name=E3V42_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05485 SOQV01000045.1 Protein Homology CDS 16716 17495 . + 0 ID=cds-TMR84023.1;Parent=gene-E3V42_05485;Dbxref=NCBI_GP:TMR84023.1;Name=TMR84023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=E3V42_05485;product=translation factor (SUA5);protein_id=TMR84023.1;transl_table=11 SOQV01000045.1 Genbank gene 17652 19385 . + . ID=gene-E3V42_05490;Name=E3V42_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05490 SOQV01000045.1 Protein Homology CDS 17652 19385 . + 0 ID=cds-TMR84024.1;Parent=gene-E3V42_05490;Dbxref=NCBI_GP:TMR84024.1;Name=TMR84024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895720.1;locus_tag=E3V42_05490;product=McrB family protein;protein_id=TMR84024.1;transl_table=11 SOQV01000045.1 Genbank gene 19345 20688 . + . ID=gene-E3V42_05495;Name=E3V42_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05495 SOQV01000045.1 Protein Homology CDS 19345 20688 . + 0 ID=cds-TMR84025.1;Parent=gene-E3V42_05495;Dbxref=NCBI_GP:TMR84025.1;Name=TMR84025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358722.1;locus_tag=E3V42_05495;product=3-isopropylmalate dehydrogenase;protein_id=TMR84025.1;transl_table=11 SOQV01000045.1 Genbank gene 20863 21849 . + . ID=gene-E3V42_05500;Name=E3V42_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05500 SOQV01000045.1 Protein Homology CDS 20863 21849 . + 0 ID=cds-TMR84026.1;Parent=gene-E3V42_05500;Dbxref=NCBI_GP:TMR84026.1;Name=TMR84026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358721.1;locus_tag=E3V42_05500;product=GMP reductase;protein_id=TMR84026.1;transl_table=11 SOQV01000045.1 Genbank gene 21916 21987 . + . ID=gene-E3V42_05505;Name=E3V42_05505;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_05505 SOQV01000045.1 tRNAscan-SE tRNA 21916 21987 . + . ID=rna-E3V42_05505;Parent=gene-E3V42_05505;anticodon=(pos:21949..21951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05505;product=tRNA-Arg SOQV01000045.1 tRNAscan-SE exon 21916 21987 . + . ID=exon-E3V42_05505-1;Parent=rna-E3V42_05505;anticodon=(pos:21949..21951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_05505;product=tRNA-Arg SOQV01000045.1 Genbank gene 22167 22865 . + . ID=gene-E3V42_05510;Name=E3V42_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05510 SOQV01000045.1 Protein Homology CDS 22167 22865 . + 0 ID=cds-TMR84027.1;Parent=gene-E3V42_05510;Dbxref=NCBI_GP:TMR84027.1;Name=TMR84027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358720.1;locus_tag=E3V42_05510;product=ribonuclease III;protein_id=TMR84027.1;transl_table=11 SOQV01000045.1 Genbank gene 22856 26395 . + . ID=gene-E3V42_05515;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=E3V42_05515 SOQV01000045.1 Protein Homology CDS 22856 26395 . + 0 ID=cds-TMR84028.1;Parent=gene-E3V42_05515;Dbxref=NCBI_GP:TMR84028.1;Name=TMR84028.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446320.1;locus_tag=E3V42_05515;product=chromosome segregation protein SMC;protein_id=TMR84028.1;transl_table=11 SOQV01000045.1 Genbank gene 26589 27440 . - . ID=gene-E3V42_05520;Name=E3V42_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05520 SOQV01000045.1 Protein Homology CDS 26589 27440 . - 0 ID=cds-TMR84029.1;Parent=gene-E3V42_05520;Dbxref=NCBI_GP:TMR84029.1;Name=TMR84029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268807.1;locus_tag=E3V42_05520;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR84029.1;transl_table=11 SOQV01000045.1 Genbank gene 27520 27588 . + . ID=gene-E3V42_05525;Name=E3V42_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05525 SOQV01000045.1 Protein Homology CDS 27520 27588 . + 0 ID=cds-TMR84083.1;Parent=gene-E3V42_05525;Dbxref=NCBI_GP:TMR84083.1;Name=TMR84083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128650800.1;locus_tag=E3V42_05525;product=SHP2/SHP3 family peptide pheromone;protein_id=TMR84083.1;transl_table=11 SOQV01000045.1 Genbank gene 27616 28842 . + . ID=gene-E3V42_05530;Name=E3V42_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05530 SOQV01000045.1 Protein Homology CDS 27616 28842 . + 0 ID=cds-TMR84030.1;Parent=gene-E3V42_05530;Dbxref=NCBI_GP:TMR84030.1;Name=TMR84030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257305.1;locus_tag=E3V42_05530;product=MFS transporter;protein_id=TMR84030.1;transl_table=11 SOQV01000045.1 Genbank pseudogene 28826 29548 . + . ID=gene-E3V42_05535;Name=E3V42_05535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05535;pseudo=true SOQV01000045.1 Protein Homology CDS 28826 29548 . + 0 ID=cds-E3V42_05535;Parent=gene-E3V42_05535;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846117.1;locus_tag=E3V42_05535;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 SOQV01000045.1 Genbank gene 29817 30608 . + . ID=gene-E3V42_05540;Name=E3V42_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05540 SOQV01000045.1 Protein Homology CDS 29817 30608 . + 0 ID=cds-TMR84031.1;Parent=gene-E3V42_05540;Dbxref=NCBI_GP:TMR84031.1;Name=TMR84031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153601.1;locus_tag=E3V42_05540;product=HAD family phosphatase;protein_id=TMR84031.1;transl_table=11 SOQV01000045.1 Genbank gene 30608 31426 . + . ID=gene-E3V42_05545;Name=E3V42_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05545 SOQV01000045.1 Protein Homology CDS 30608 31426 . + 0 ID=cds-TMR84032.1;Parent=gene-E3V42_05545;Dbxref=NCBI_GP:TMR84032.1;Name=TMR84032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358717.1;locus_tag=E3V42_05545;product=HAD family phosphatase;protein_id=TMR84032.1;transl_table=11 SOQV01000045.1 Genbank gene 31430 32719 . + . ID=gene-E3V42_05550;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=E3V42_05550 SOQV01000045.1 Protein Homology CDS 31430 32719 . + 0 ID=cds-TMR84033.1;Parent=gene-E3V42_05550;Dbxref=NCBI_GP:TMR84033.1;Name=TMR84033.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358716.1;locus_tag=E3V42_05550;product=signal recognition particle-docking protein FtsY;protein_id=TMR84033.1;transl_table=11 SOQV01000045.1 Genbank gene 32765 34252 . - . ID=gene-E3V42_05555;Name=E3V42_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05555 SOQV01000045.1 Protein Homology CDS 32765 34252 . - 0 ID=cds-TMR84034.1;Parent=gene-E3V42_05555;Dbxref=NCBI_GP:TMR84034.1;Name=TMR84034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358715.1;locus_tag=E3V42_05555;product=glucose-6-phosphate dehydrogenase;protein_id=TMR84034.1;transl_table=11 SOQV01000045.1 Genbank gene 34403 35143 . - . ID=gene-E3V42_05560;Name=E3V42_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05560 SOQV01000045.1 Protein Homology CDS 34403 35143 . - 0 ID=cds-TMR84035.1;Parent=gene-E3V42_05560;Dbxref=NCBI_GP:TMR84035.1;Name=TMR84035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=E3V42_05560;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR84035.1;transl_table=11 SOQV01000045.1 Genbank gene 35143 37308 . - . ID=gene-E3V42_05565;Name=E3V42_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05565 SOQV01000045.1 Protein Homology CDS 35143 37308 . - 0 ID=cds-TMR84036.1;Parent=gene-E3V42_05565;Dbxref=NCBI_GP:TMR84036.1;Name=TMR84036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358713.1;locus_tag=E3V42_05565;product=transporter substrate-binding domain-containing protein;protein_id=TMR84036.1;transl_table=11 SOQV01000045.1 Genbank gene 37481 38434 . + . ID=gene-E3V42_05570;Name=E3V42_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05570 SOQV01000045.1 Protein Homology CDS 37481 38434 . + 0 ID=cds-TMR84037.1;Parent=gene-E3V42_05570;Dbxref=NCBI_GP:TMR84037.1;Name=TMR84037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653468.1;locus_tag=E3V42_05570;product=CPBP family intramembrane metalloprotease;protein_id=TMR84037.1;transl_table=11 SOQV01000045.1 Genbank gene 38511 40499 . + . ID=gene-E3V42_05575;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=E3V42_05575 SOQV01000045.1 Protein Homology CDS 38511 40499 . + 0 ID=cds-TMR84038.1;Parent=gene-E3V42_05575;Dbxref=NCBI_GP:TMR84038.1;Name=TMR84038.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358711.1;locus_tag=E3V42_05575;product=excinuclease ABC subunit B;protein_id=TMR84038.1;transl_table=11 SOQV01000045.1 Genbank gene 40509 41072 . + . ID=gene-E3V42_05580;Name=E3V42_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05580 SOQV01000045.1 Protein Homology CDS 40509 41072 . + 0 ID=cds-TMR84039.1;Parent=gene-E3V42_05580;Dbxref=NCBI_GP:TMR84039.1;Name=TMR84039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358710.1;locus_tag=E3V42_05580;product=N-acetyltransferase;protein_id=TMR84039.1;transl_table=11 SOQV01000045.1 Genbank gene 41038 41526 . + . ID=gene-E3V42_05585;Name=E3V42_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05585 SOQV01000045.1 Protein Homology CDS 41038 41526 . + 0 ID=cds-TMR84040.1;Parent=gene-E3V42_05585;Dbxref=NCBI_GP:TMR84040.1;Name=TMR84040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358709.1;locus_tag=E3V42_05585;product=GNAT family N-acetyltransferase;protein_id=TMR84040.1;transl_table=11 SOQV01000045.1 Genbank gene 41600 42067 . + . ID=gene-E3V42_05590;Name=E3V42_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05590 SOQV01000045.1 Protein Homology CDS 41600 42067 . + 0 ID=cds-TMR84041.1;Parent=gene-E3V42_05590;Dbxref=NCBI_GP:TMR84041.1;Name=TMR84041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446309.1;locus_tag=E3V42_05590;product=8-oxo-dGTP diphosphatase;protein_id=TMR84041.1;transl_table=11 SOQV01000045.1 Genbank pseudogene 42064 42132 . - . ID=gene-E3V42_05595;Name=E3V42_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05595;pseudo=true SOQV01000045.1 Protein Homology CDS 42064 42132 . - 0 ID=cds-E3V42_05595;Parent=gene-E3V42_05595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358707.1;locus_tag=E3V42_05595;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11 SOQV01000045.1 Genbank gene 42276 43250 . + . ID=gene-E3V42_05600;Name=E3V42_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05600 SOQV01000045.1 Protein Homology CDS 42276 43250 . + 0 ID=cds-TMR84042.1;Parent=gene-E3V42_05600;Dbxref=NCBI_GP:TMR84042.1;Name=TMR84042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207597.1;locus_tag=E3V42_05600;product=LacI family transcriptional regulator;protein_id=TMR84042.1;transl_table=11 SOQV01000045.1 Genbank gene 43250 44161 . + . ID=gene-E3V42_05605;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=E3V42_05605 SOQV01000045.1 Protein Homology CDS 43250 44161 . + 0 ID=cds-TMR84043.1;Parent=gene-E3V42_05605;Dbxref=NCBI_GP:TMR84043.1;Name=TMR84043.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739765.1;locus_tag=E3V42_05605;product=ribokinase;protein_id=TMR84043.1;transl_table=11 SOQV01000045.1 Genbank gene 44136 44534 . + . ID=gene-E3V42_05610;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=E3V42_05610 SOQV01000045.1 Protein Homology CDS 44136 44534 . + 0 ID=cds-TMR84044.1;Parent=gene-E3V42_05610;Dbxref=NCBI_GP:TMR84044.1;Name=TMR84044.1;gbkey=CDS;gene=rbsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100993.1;locus_tag=E3V42_05610;product=D-ribose pyranase;protein_id=TMR84044.1;transl_table=11 SOQV01000045.1 Genbank gene 44548 46026 . + . ID=gene-E3V42_05615;Name=E3V42_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05615 SOQV01000045.1 Protein Homology CDS 44548 46026 . + 0 ID=cds-TMR84045.1;Parent=gene-E3V42_05615;Dbxref=NCBI_GP:TMR84045.1;Name=TMR84045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_687152.1;locus_tag=E3V42_05615;product=sugar ABC transporter ATP-binding protein;protein_id=TMR84045.1;transl_table=11 SOQV01000045.1 Genbank gene 46028 46972 . + . ID=gene-E3V42_05620;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=E3V42_05620 SOQV01000045.1 Protein Homology CDS 46028 46972 . + 0 ID=cds-TMR84046.1;Parent=gene-E3V42_05620;Dbxref=NCBI_GP:TMR84046.1;Name=TMR84046.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739551.1;locus_tag=E3V42_05620;product=ribose ABC transporter permease;protein_id=TMR84046.1;transl_table=11 SOQV01000045.1 Genbank gene 47076 48041 . + . ID=gene-E3V42_05625;Name=E3V42_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05625 SOQV01000045.1 Protein Homology CDS 47076 48041 . + 0 ID=cds-TMR84047.1;Parent=gene-E3V42_05625;Dbxref=NCBI_GP:TMR84047.1;Name=TMR84047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_687150.1;locus_tag=E3V42_05625;product=D-ribose ABC transporter substrate-binding protein;protein_id=TMR84047.1;transl_table=11 SOQV01000045.1 Genbank gene 48120 48257 . + . ID=gene-E3V42_05630;Name=E3V42_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05630 SOQV01000045.1 Protein Homology CDS 48120 48257 . + 0 ID=cds-TMR84084.1;Parent=gene-E3V42_05630;Dbxref=NCBI_GP:TMR84084.1;Name=TMR84084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168176.1;locus_tag=E3V42_05630;product=DNA mismatch repair protein MutT;protein_id=TMR84084.1;transl_table=11 SOQV01000045.1 Genbank gene 48254 48769 . - . ID=gene-E3V42_05635;Name=E3V42_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05635 SOQV01000045.1 Protein Homology CDS 48254 48769 . - 0 ID=cds-TMR84048.1;Parent=gene-E3V42_05635;Dbxref=NCBI_GP:TMR84048.1;Name=TMR84048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358707.1;locus_tag=E3V42_05635;product=transcription repressor NadR;protein_id=TMR84048.1;transl_table=11 SOQV01000045.1 Genbank gene 48781 49308 . - . ID=gene-E3V42_05640;Name=E3V42_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05640 SOQV01000045.1 Protein Homology CDS 48781 49308 . - 0 ID=cds-TMR84049.1;Parent=gene-E3V42_05640;Dbxref=NCBI_GP:TMR84049.1;Name=TMR84049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446307.1;locus_tag=E3V42_05640;product=hypothetical protein;protein_id=TMR84049.1;transl_table=11 SOQV01000045.1 Genbank gene 49599 50162 . - . ID=gene-E3V42_05645;Name=E3V42_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05645 SOQV01000045.1 Protein Homology CDS 49599 50162 . - 0 ID=cds-TMR84050.1;Parent=gene-E3V42_05645;Dbxref=NCBI_GP:TMR84050.1;Name=TMR84050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358705.1;locus_tag=E3V42_05645;product=ECF transporter S component;protein_id=TMR84050.1;transl_table=11 SOQV01000045.1 Genbank gene 50146 50697 . - . ID=gene-E3V42_05650;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=E3V42_05650 SOQV01000045.1 Protein Homology CDS 50146 50697 . - 0 ID=cds-TMR84051.1;Parent=gene-E3V42_05650;Dbxref=NCBI_GP:TMR84051.1;Name=TMR84051.1;gbkey=CDS;gene=coaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358704.1;locus_tag=E3V42_05650;product=phosphopantothenoylcysteine decarboxylase;protein_id=TMR84051.1;transl_table=11 SOQV01000045.1 Genbank gene 50709 51398 . - . ID=gene-E3V42_05655;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=E3V42_05655 SOQV01000045.1 Protein Homology CDS 50709 51398 . - 0 ID=cds-TMR84052.1;Parent=gene-E3V42_05655;Dbxref=NCBI_GP:TMR84052.1;Name=TMR84052.1;gbkey=CDS;gene=coaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446304.1;locus_tag=E3V42_05655;product=phosphopantothenate--cysteine ligase;protein_id=TMR84052.1;transl_table=11 SOQV01000045.1 Genbank gene 51628 53298 . + . ID=gene-E3V42_05660;Name=E3V42_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05660 SOQV01000045.1 Protein Homology CDS 51628 53298 . + 0 ID=cds-TMR84053.1;Parent=gene-E3V42_05660;Dbxref=NCBI_GP:TMR84053.1;Name=TMR84053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358702.1;locus_tag=E3V42_05660;product=formate--tetrahydrofolate ligase;protein_id=TMR84053.1;transl_table=11 SOQV01000045.1 Genbank gene 53714 54889 . + . ID=gene-E3V42_05665;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=E3V42_05665 SOQV01000045.1 Protein Homology CDS 53714 54889 . + 0 ID=cds-TMR84054.1;Parent=gene-E3V42_05665;Dbxref=NCBI_GP:TMR84054.1;Name=TMR84054.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358701.1;locus_tag=E3V42_05665;product=A/G-specific adenine glycosylase;protein_id=TMR84054.1;transl_table=11 SOQV01000045.1 Genbank gene 54945 55649 . + . ID=gene-E3V42_05670;Name=E3V42_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05670 SOQV01000045.1 Protein Homology CDS 54945 55649 . + 0 ID=cds-TMR84055.1;Parent=gene-E3V42_05670;Dbxref=NCBI_GP:TMR84055.1;Name=TMR84055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722069.1;locus_tag=E3V42_05670;product=response regulator transcription factor;protein_id=TMR84055.1;transl_table=11 SOQV01000045.1 Genbank gene 55642 56991 . + . ID=gene-E3V42_05675;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=E3V42_05675 SOQV01000045.1 Protein Homology CDS 55642 56991 . + 0 ID=cds-TMR84056.1;Parent=gene-E3V42_05675;Dbxref=NCBI_GP:TMR84056.1;Name=TMR84056.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358699.1;locus_tag=E3V42_05675;product=cell wall metabolism sensor histidine kinase VicK;protein_id=TMR84056.1;transl_table=11 SOQV01000045.1 Genbank gene 56993 57802 . + . ID=gene-E3V42_05680;Name=E3V42_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05680 SOQV01000045.1 Protein Homology CDS 56993 57802 . + 0 ID=cds-TMR84057.1;Parent=gene-E3V42_05680;Dbxref=NCBI_GP:TMR84057.1;Name=TMR84057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446286.1;locus_tag=E3V42_05680;product=MBL fold metallo-hydrolase;protein_id=TMR84057.1;transl_table=11 SOQV01000045.1 Genbank gene 57833 58135 . + . ID=gene-E3V42_05685;Name=E3V42_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05685 SOQV01000045.1 Protein Homology CDS 57833 58135 . + 0 ID=cds-TMR84058.1;Parent=gene-E3V42_05685;Dbxref=NCBI_GP:TMR84058.1;Name=TMR84058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358697.1;locus_tag=E3V42_05685;product=antitoxin;protein_id=TMR84058.1;transl_table=11 SOQV01000045.1 Genbank gene 58128 58391 . + . ID=gene-E3V42_05690;Name=E3V42_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05690 SOQV01000045.1 Protein Homology CDS 58128 58391 . + 0 ID=cds-TMR84059.1;Parent=gene-E3V42_05690;Dbxref=NCBI_GP:TMR84059.1;Name=TMR84059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358696.1;locus_tag=E3V42_05690;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR84059.1;transl_table=11 SOQV01000045.1 Genbank gene 58467 60338 . + . ID=gene-E3V42_05695;Name=E3V42_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05695 SOQV01000045.1 Protein Homology CDS 58467 60338 . + 0 ID=cds-TMR84060.1;Parent=gene-E3V42_05695;Dbxref=NCBI_GP:TMR84060.1;Name=TMR84060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150981.1;locus_tag=E3V42_05695;product=restriction endonuclease;protein_id=TMR84060.1;transl_table=11 SOQV01000045.1 Genbank gene 60448 61398 . + . ID=gene-E3V42_05700;Name=E3V42_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05700 SOQV01000045.1 Protein Homology CDS 60448 61398 . + 0 ID=cds-TMR84061.1;Parent=gene-E3V42_05700;Dbxref=NCBI_GP:TMR84061.1;Name=TMR84061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658133.1;locus_tag=E3V42_05700;product=Abi family protein;protein_id=TMR84061.1;transl_table=11 SOQV01000045.1 Genbank gene 61421 64675 . + . ID=gene-E3V42_05705;Name=E3V42_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05705 SOQV01000045.1 Protein Homology CDS 61421 64675 . + 0 ID=cds-TMR84062.1;Parent=gene-E3V42_05705;Dbxref=NCBI_GP:TMR84062.1;Name=TMR84062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358694.1;locus_tag=E3V42_05705;product=restriction endonuclease;protein_id=TMR84062.1;transl_table=11 SOQV01000045.1 Genbank gene 64946 65914 . - . ID=gene-E3V42_05710;Name=E3V42_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05710 SOQV01000045.1 Protein Homology CDS 64946 65914 . - 0 ID=cds-TMR84063.1;Parent=gene-E3V42_05710;Dbxref=NCBI_GP:TMR84063.1;Name=TMR84063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035175.1;locus_tag=E3V42_05710;product=L-lactate dehydrogenase;protein_id=TMR84063.1;transl_table=11 SOQV01000045.1 Genbank gene 66108 68576 . + . ID=gene-E3V42_05715;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=E3V42_05715 SOQV01000045.1 Protein Homology CDS 66108 68576 . + 0 ID=cds-TMR84064.1;Parent=gene-E3V42_05715;Dbxref=NCBI_GP:TMR84064.1;Name=TMR84064.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358692.1;locus_tag=E3V42_05715;product=DNA gyrase subunit A;protein_id=TMR84064.1;transl_table=11 SOQV01000045.1 Genbank gene 68576 69319 . + . ID=gene-E3V42_05720;Name=E3V42_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05720 SOQV01000045.1 Protein Homology CDS 68576 69319 . + 0 ID=cds-TMR84065.1;Parent=gene-E3V42_05720;Dbxref=NCBI_GP:TMR84065.1;Name=TMR84065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358691.1;locus_tag=E3V42_05720;product=sortase;protein_id=TMR84065.1;transl_table=11 SOQV01000045.1 Genbank gene 69452 69760 . + . ID=gene-E3V42_05725;Name=E3V42_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05725 SOQV01000045.1 Protein Homology CDS 69452 69760 . + 0 ID=cds-TMR84066.1;Parent=gene-E3V42_05725;Dbxref=NCBI_GP:TMR84066.1;Name=TMR84066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291821.1;locus_tag=E3V42_05725;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=TMR84066.1;transl_table=11 SOQV01000045.1 Genbank gene 69856 71130 . + . ID=gene-E3V42_05730;Name=E3V42_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05730 SOQV01000045.1 Protein Homology CDS 69856 71130 . + 0 ID=cds-TMR84067.1;Parent=gene-E3V42_05730;Dbxref=NCBI_GP:TMR84067.1;Name=TMR84067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358687.1;locus_tag=E3V42_05730;product=DUF2130 domain-containing protein;protein_id=TMR84067.1;transl_table=11 SOQV01000045.1 Genbank gene 71140 72018 . + . ID=gene-E3V42_05735;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=E3V42_05735 SOQV01000045.1 Protein Homology CDS 71140 72018 . + 0 ID=cds-TMR84068.1;Parent=gene-E3V42_05735;Dbxref=NCBI_GP:TMR84068.1;Name=TMR84068.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358685.1;locus_tag=E3V42_05735;product=tRNA pseudouridine(55) synthase TruB;protein_id=TMR84068.1;transl_table=11 SOQV01000045.1 Genbank gene 72167 72388 . + . ID=gene-E3V42_05740;Name=E3V42_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05740 SOQV01000045.1 Protein Homology CDS 72167 72388 . + 0 ID=cds-TMR84069.1;Parent=gene-E3V42_05740;Dbxref=NCBI_GP:TMR84069.1;Name=TMR84069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378420.1;locus_tag=E3V42_05740;product=bacteriocin;protein_id=TMR84069.1;transl_table=11 SOQV01000045.1 Genbank gene 72385 72687 . + . ID=gene-E3V42_05745;Name=E3V42_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05745 SOQV01000045.1 Protein Homology CDS 72385 72687 . + 0 ID=cds-TMR84070.1;Parent=gene-E3V42_05745;Dbxref=NCBI_GP:TMR84070.1;Name=TMR84070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358684.1;locus_tag=E3V42_05745;product=bacteriocin immunity protein;protein_id=TMR84070.1;transl_table=11 SOQV01000045.1 Genbank gene 72690 72800 . - . ID=gene-E3V42_05750;Name=E3V42_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05750 SOQV01000045.1 Protein Homology CDS 72690 72800 . - 0 ID=cds-TMR84071.1;Parent=gene-E3V42_05750;Dbxref=NCBI_GP:TMR84071.1;Name=TMR84071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809208.1;locus_tag=E3V42_05750;product=pseudouridine synthase;protein_id=TMR84071.1;transl_table=11 SOQV01000045.1 Genbank gene 72795 73433 . + . ID=gene-E3V42_05755;Name=E3V42_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05755 SOQV01000045.1 Protein Homology CDS 72795 73433 . + 0 ID=cds-TMR84072.1;Parent=gene-E3V42_05755;Dbxref=NCBI_GP:TMR84072.1;Name=TMR84072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446125.1;locus_tag=E3V42_05755;product=uridine kinase;protein_id=TMR84072.1;transl_table=11 SOQV01000045.1 Genbank gene 73561 74901 . + . ID=gene-E3V42_05760;Name=E3V42_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05760 SOQV01000045.1 Protein Homology CDS 73561 74901 . + 0 ID=cds-TMR84073.1;Parent=gene-E3V42_05760;Dbxref=NCBI_GP:TMR84073.1;Name=TMR84073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446126.1;locus_tag=E3V42_05760;product=exodeoxyribonuclease VII large subunit;protein_id=TMR84073.1;transl_table=11 SOQV01000045.1 Genbank gene 74879 75091 . + . ID=gene-E3V42_05765;Name=E3V42_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05765 SOQV01000045.1 Protein Homology CDS 74879 75091 . + 0 ID=cds-TMR84074.1;Parent=gene-E3V42_05765;Dbxref=NCBI_GP:TMR84074.1;Name=TMR84074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358681.1;locus_tag=E3V42_05765;product=exodeoxyribonuclease VII small subunit;protein_id=TMR84074.1;transl_table=11 SOQV01000045.1 Genbank gene 75088 75963 . + . ID=gene-E3V42_05770;Name=E3V42_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05770 SOQV01000045.1 Protein Homology CDS 75088 75963 . + 0 ID=cds-TMR84075.1;Parent=gene-E3V42_05770;Dbxref=NCBI_GP:TMR84075.1;Name=TMR84075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358680.1;locus_tag=E3V42_05770;product=polyprenyl synthetase family protein;protein_id=TMR84075.1;transl_table=11 SOQV01000045.1 Genbank gene 75956 76771 . + . ID=gene-E3V42_05775;Name=E3V42_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05775 SOQV01000045.1 Protein Homology CDS 75956 76771 . + 0 ID=cds-TMR84076.1;Parent=gene-E3V42_05775;Dbxref=NCBI_GP:TMR84076.1;Name=TMR84076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446129.1;locus_tag=E3V42_05775;product=TlyA family RNA methyltransferase;protein_id=TMR84076.1;transl_table=11 SOQV01000045.1 Genbank gene 76764 77195 . + . ID=gene-E3V42_05780;Name=E3V42_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05780 SOQV01000045.1 Protein Homology CDS 76764 77195 . + 0 ID=cds-TMR84077.1;Parent=gene-E3V42_05780;Dbxref=NCBI_GP:TMR84077.1;Name=TMR84077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446130.1;locus_tag=E3V42_05780;product=arginine repressor;protein_id=TMR84077.1;transl_table=11 SOQV01000045.1 Genbank gene 77202 78869 . + . ID=gene-E3V42_05785;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=E3V42_05785 SOQV01000045.1 Protein Homology CDS 77202 78869 . + 0 ID=cds-TMR84078.1;Parent=gene-E3V42_05785;Dbxref=NCBI_GP:TMR84078.1;Name=TMR84078.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358677.1;locus_tag=E3V42_05785;product=DNA repair protein RecN;protein_id=TMR84078.1;transl_table=11 SOQV01000045.1 Genbank gene 78871 79599 . + . ID=gene-E3V42_05790;Name=E3V42_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05790 SOQV01000045.1 Protein Homology CDS 78871 79599 . + 0 ID=cds-TMR84079.1;Parent=gene-E3V42_05790;Dbxref=NCBI_GP:TMR84079.1;Name=TMR84079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446132.1;locus_tag=E3V42_05790;product=serine/threonine protein phosphatase;protein_id=TMR84079.1;transl_table=11 SOQV01000045.1 Genbank gene 79678 81501 . + . ID=gene-E3V42_05795;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=E3V42_05795 SOQV01000045.1 Protein Homology CDS 79678 81501 . + 0 ID=cds-TMR84080.1;Parent=gene-E3V42_05795;Dbxref=NCBI_GP:TMR84080.1;Name=TMR84080.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446133.1;locus_tag=E3V42_05795;product=elongation factor 4;protein_id=TMR84080.1;transl_table=11 SOQV01000045.1 Genbank gene 81834 82241 . + . ID=gene-E3V42_05800;Name=E3V42_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05800 SOQV01000045.1 Protein Homology CDS 81834 82241 . + 0 ID=cds-TMR84081.1;Parent=gene-E3V42_05800;Dbxref=NCBI_GP:TMR84081.1;Name=TMR84081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357625.1;locus_tag=E3V42_05800;product=hypothetical protein;protein_id=TMR84081.1;transl_table=11 SOQV01000045.1 Genbank pseudogene 82275 82554 . + . ID=gene-E3V42_05805;Name=E3V42_05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05805;pseudo=true SOQV01000045.1 Protein Homology CDS 82275 82554 . + 0 ID=cds-E3V42_05805;Parent=gene-E3V42_05805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845566.1;locus_tag=E3V42_05805;product=damage-inducible protein;pseudo=true;transl_table=11 SOQV01000045.1 Genbank gene 82512 82745 . + . ID=gene-E3V42_05810;Name=E3V42_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05810 SOQV01000045.1 Protein Homology CDS 82512 82745 . + 0 ID=cds-TMR84082.1;Parent=gene-E3V42_05810;Dbxref=NCBI_GP:TMR84082.1;Name=TMR84082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445203.1;locus_tag=E3V42_05810;product=hypothetical protein;protein_id=TMR84082.1;transl_table=11 ##sequence-region SOQV01000046.1 1 37798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000046.1 Genbank region 1 37798 . + . ID=SOQV01000046.1:1..37798;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000046.1 Genbank gene 147 386 . - . ID=gene-E3V42_05815;Name=E3V42_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05815 SOQV01000046.1 Protein Homology CDS 147 386 . - 0 ID=cds-TMR83922.1;Parent=gene-E3V42_05815;Dbxref=NCBI_GP:TMR83922.1;Name=TMR83922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590445.1;locus_tag=E3V42_05815;product=KH domain-containing protein;protein_id=TMR83922.1;transl_table=11 SOQV01000046.1 Genbank gene 406 678 . - . ID=gene-E3V42_05820;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=E3V42_05820 SOQV01000046.1 Protein Homology CDS 406 678 . - 0 ID=cds-TMR83923.1;Parent=gene-E3V42_05820;Dbxref=NCBI_GP:TMR83923.1;Name=TMR83923.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=E3V42_05820;product=30S ribosomal protein S16;protein_id=TMR83923.1;transl_table=11 SOQV01000046.1 Genbank gene 856 1056 . + . ID=gene-E3V42_05825;Name=E3V42_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05825 SOQV01000046.1 Protein Homology CDS 856 1056 . + 0 ID=cds-TMR83924.1;Parent=gene-E3V42_05825;Dbxref=NCBI_GP:TMR83924.1;Name=TMR83924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092275.1;locus_tag=E3V42_05825;product=hypothetical protein;protein_id=TMR83924.1;transl_table=11 SOQV01000046.1 Genbank gene 1139 1360 . - . ID=gene-E3V42_05830;Name=E3V42_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05830 SOQV01000046.1 Protein Homology CDS 1139 1360 . - 0 ID=cds-TMR83925.1;Parent=gene-E3V42_05830;Dbxref=NCBI_GP:TMR83925.1;Name=TMR83925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_05830;product=hypothetical protein;protein_id=TMR83925.1;transl_table=11 SOQV01000046.1 Genbank pseudogene 1401 1502 . - . ID=gene-E3V42_05835;Name=E3V42_05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05835;pseudo=true SOQV01000046.1 Protein Homology CDS 1401 1502 . - 0 ID=cds-E3V42_05835;Parent=gene-E3V42_05835;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893744.1;locus_tag=E3V42_05835;product=30S ribosomal protein S9;pseudo=true;transl_table=11 SOQV01000046.1 Genbank pseudogene 1675 1773 . - . ID=gene-E3V42_05840;Name=E3V42_05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05840;pseudo=true SOQV01000046.1 Protein Homology CDS 1675 1773 . - 0 ID=cds-E3V42_05840;Parent=gene-E3V42_05840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036206.1;locus_tag=E3V42_05840;product=site-specific integrase;pseudo=true;transl_table=11 SOQV01000046.1 Genbank gene 1740 2234 . - . ID=gene-E3V42_05845;Name=E3V42_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05845 SOQV01000046.1 Protein Homology CDS 1740 2234 . - 0 ID=cds-TMR83926.1;Parent=gene-E3V42_05845;Dbxref=NCBI_GP:TMR83926.1;Name=TMR83926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284846.1;locus_tag=E3V42_05845;product=XRE family transcriptional regulator;protein_id=TMR83926.1;transl_table=11 SOQV01000046.1 Genbank gene 2278 2616 . - . ID=gene-E3V42_05850;Name=cadX;gbkey=Gene;gene=cadX;gene_biotype=protein_coding;locus_tag=E3V42_05850 SOQV01000046.1 Protein Homology CDS 2278 2616 . - 0 ID=cds-TMR83927.1;Parent=gene-E3V42_05850;Dbxref=NCBI_GP:TMR83927.1;Name=TMR83927.1;gbkey=CDS;gene=cadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711077.1;locus_tag=E3V42_05850;product=Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX;protein_id=TMR83927.1;transl_table=11 SOQV01000046.1 Genbank gene 2628 3254 . - . ID=gene-E3V42_05855;Name=E3V42_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05855 SOQV01000046.1 Protein Homology CDS 2628 3254 . - 0 ID=cds-TMR83928.1;Parent=gene-E3V42_05855;Dbxref=NCBI_GP:TMR83928.1;Name=TMR83928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035949.1;locus_tag=E3V42_05855;product=CadD family cadmium resistance transporter;protein_id=TMR83928.1;transl_table=11 SOQV01000046.1 Genbank gene 3271 3444 . + . ID=gene-E3V42_05860;Name=E3V42_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05860 SOQV01000046.1 Protein Homology CDS 3271 3444 . + 0 ID=cds-TMR83929.1;Parent=gene-E3V42_05860;Dbxref=NCBI_GP:TMR83929.1;Name=TMR83929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892741.1;locus_tag=E3V42_05860;product=FanG protein;protein_id=TMR83929.1;transl_table=11 SOQV01000046.1 Genbank gene 3859 4437 . + . ID=gene-E3V42_05865;Name=E3V42_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05865 SOQV01000046.1 Protein Homology CDS 3859 4437 . + 0 ID=cds-TMR83930.1;Parent=gene-E3V42_05865;Dbxref=NCBI_GP:TMR83930.1;Name=TMR83930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445940.1;locus_tag=E3V42_05865;product=DUF3796 domain-containing protein;protein_id=TMR83930.1;transl_table=11 SOQV01000046.1 Genbank gene 4440 4664 . + . ID=gene-E3V42_05870;Name=E3V42_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05870 SOQV01000046.1 Protein Homology CDS 4440 4664 . + 0 ID=cds-TMR83931.1;Parent=gene-E3V42_05870;Dbxref=NCBI_GP:TMR83931.1;Name=TMR83931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911008.1;locus_tag=E3V42_05870;product=transcriptional regulator;protein_id=TMR83931.1;transl_table=11 SOQV01000046.1 Genbank gene 4993 5154 . + . ID=gene-E3V42_05875;Name=E3V42_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05875 SOQV01000046.1 Protein Homology CDS 4993 5154 . + 0 ID=cds-TMR83932.1;Parent=gene-E3V42_05875;Dbxref=NCBI_GP:TMR83932.1;Name=TMR83932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883133.1;locus_tag=E3V42_05875;product=hypothetical protein;protein_id=TMR83932.1;transl_table=11 SOQV01000046.1 Genbank gene 5262 6065 . + . ID=gene-E3V42_05880;Name=E3V42_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05880 SOQV01000046.1 Protein Homology CDS 5262 6065 . + 0 ID=cds-TMR83933.1;Parent=gene-E3V42_05880;Dbxref=NCBI_GP:TMR83933.1;Name=TMR83933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358273.1;locus_tag=E3V42_05880;product=peptidylprolyl isomerase;protein_id=TMR83933.1;transl_table=11 SOQV01000046.1 Genbank gene 6121 7662 . - . ID=gene-E3V42_05885;Name=E3V42_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05885 SOQV01000046.1 Protein Homology CDS 6121 7662 . - 0 ID=cds-TMR83934.1;Parent=gene-E3V42_05885;Dbxref=NCBI_GP:TMR83934.1;Name=TMR83934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445936.1;locus_tag=E3V42_05885;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=TMR83934.1;transl_table=11 SOQV01000046.1 Genbank gene 7664 8146 . - . ID=gene-E3V42_05890;Name=E3V42_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05890 SOQV01000046.1 Protein Homology CDS 7664 8146 . - 0 ID=cds-TMR83935.1;Parent=gene-E3V42_05890;Dbxref=NCBI_GP:TMR83935.1;Name=TMR83935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976721.1;locus_tag=E3V42_05890;product=VanZ family protein;protein_id=TMR83935.1;transl_table=11 SOQV01000046.1 Genbank gene 8146 9231 . - . ID=gene-E3V42_05895;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=E3V42_05895 SOQV01000046.1 Protein Homology CDS 8146 9231 . - 0 ID=cds-TMR83936.1;Parent=gene-E3V42_05895;Dbxref=NCBI_GP:TMR83936.1;Name=TMR83936.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445934.1;locus_tag=E3V42_05895;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=TMR83936.1;transl_table=11 SOQV01000046.1 Genbank gene 9252 9782 . - . ID=gene-E3V42_05900;Name=E3V42_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05900 SOQV01000046.1 Protein Homology CDS 9252 9782 . - 0 ID=cds-TMR83937.1;Parent=gene-E3V42_05900;Dbxref=NCBI_GP:TMR83937.1;Name=TMR83937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445933.1;locus_tag=E3V42_05900;product=DUF1027 domain-containing protein;protein_id=TMR83937.1;transl_table=11 SOQV01000046.1 Genbank gene 9939 10544 . - . ID=gene-E3V42_05905;Name=E3V42_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05905 SOQV01000046.1 Protein Homology CDS 9939 10544 . - 0 ID=cds-TMR83938.1;Parent=gene-E3V42_05905;Dbxref=NCBI_GP:TMR83938.1;Name=TMR83938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358268.1;locus_tag=E3V42_05905;product=superoxide dismutase;protein_id=TMR83938.1;transl_table=11 SOQV01000046.1 Genbank pseudogene 10809 10883 . - . ID=gene-E3V42_05910;Name=E3V42_05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05910;pseudo=true SOQV01000046.1 Protein Homology CDS 10809 10883 . - 0 ID=cds-E3V42_05910;Parent=gene-E3V42_05910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_05910;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000046.1 Genbank gene 10959 11996 . - . ID=gene-E3V42_05915;Name=E3V42_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05915 SOQV01000046.1 Protein Homology CDS 10959 11996 . - 0 ID=cds-TMR83939.1;Parent=gene-E3V42_05915;Dbxref=NCBI_GP:TMR83939.1;Name=TMR83939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358267.1;locus_tag=E3V42_05915;product=DNA polymerase III subunit delta;protein_id=TMR83939.1;transl_table=11 SOQV01000046.1 Genbank gene 12030 12965 . - . ID=gene-E3V42_05920;Name=E3V42_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05920 SOQV01000046.1 Protein Homology CDS 12030 12965 . - 0 ID=cds-TMR83940.1;Parent=gene-E3V42_05920;Dbxref=NCBI_GP:TMR83940.1;Name=TMR83940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358266.1;locus_tag=E3V42_05920;product=dihydroorotate oxidase;protein_id=TMR83940.1;transl_table=11 SOQV01000046.1 Genbank gene 13099 13227 . - . ID=gene-E3V42_05925;Name=E3V42_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05925 SOQV01000046.1 Protein Homology CDS 13099 13227 . - 0 ID=cds-TMR83966.1;Parent=gene-E3V42_05925;Dbxref=NCBI_GP:TMR83966.1;Name=TMR83966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809373.1;locus_tag=E3V42_05925;product=dihydroorotate dehydrogenase;protein_id=TMR83966.1;transl_table=11 SOQV01000046.1 Genbank gene 13413 14603 . - . ID=gene-E3V42_05930;Name=E3V42_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05930 SOQV01000046.1 Protein Homology CDS 13413 14603 . - 0 ID=cds-TMR83941.1;Parent=gene-E3V42_05930;Dbxref=NCBI_GP:TMR83941.1;Name=TMR83941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358265.1;locus_tag=E3V42_05930;product=methionine adenosyltransferase;protein_id=TMR83941.1;transl_table=11 SOQV01000046.1 Genbank pseudogene 14648 14872 . + . ID=gene-E3V42_05935;Name=E3V42_05935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05935;pseudo=true SOQV01000046.1 Protein Homology CDS 14648 14872 . + 0 ID=cds-E3V42_05935;Parent=gene-E3V42_05935;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446503.1;locus_tag=E3V42_05935;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000046.1 Genbank gene 14965 16308 . - . ID=gene-E3V42_05940;Name=E3V42_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05940 SOQV01000046.1 Protein Homology CDS 14965 16308 . - 0 ID=cds-TMR83942.1;Parent=gene-E3V42_05940;Dbxref=NCBI_GP:TMR83942.1;Name=TMR83942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446504.1;locus_tag=E3V42_05940;product=DEAD/DEAH box helicase;protein_id=TMR83942.1;transl_table=11 SOQV01000046.1 Genbank pseudogene 16478 16549 . - . ID=gene-E3V42_05945;Name=E3V42_05945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_05945;pseudo=true SOQV01000046.1 Protein Homology CDS 16478 16549 . - 0 ID=cds-E3V42_05945;Parent=gene-E3V42_05945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_05945;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000046.1 Genbank gene 16620 17435 . - . ID=gene-E3V42_05950;Name=E3V42_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05950 SOQV01000046.1 Protein Homology CDS 16620 17435 . - 0 ID=cds-TMR83943.1;Parent=gene-E3V42_05950;Dbxref=NCBI_GP:TMR83943.1;Name=TMR83943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358263.1;locus_tag=E3V42_05950;product=hydrolase;protein_id=TMR83943.1;transl_table=11 SOQV01000046.1 Genbank gene 17487 19667 . - . ID=gene-E3V42_05955;Name=E3V42_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05955 SOQV01000046.1 Protein Homology CDS 17487 19667 . - 0 ID=cds-TMR83944.1;Parent=gene-E3V42_05955;Dbxref=NCBI_GP:TMR83944.1;Name=TMR83944.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446506.1;locus_tag=E3V42_05955;product=PTS glucose/maltose transporter subunit IIBCA;protein_id=TMR83944.1;transl_table=11 SOQV01000046.1 Genbank gene 20074 21000 . - . ID=gene-E3V42_05960;Name=E3V42_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05960 SOQV01000046.1 Protein Homology CDS 20074 21000 . - 0 ID=cds-TMR83945.1;Parent=gene-E3V42_05960;Dbxref=NCBI_GP:TMR83945.1;Name=TMR83945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446508.1;locus_tag=E3V42_05960;product=ABC transporter permease;protein_id=TMR83945.1;transl_table=11 SOQV01000046.1 Genbank gene 20993 21685 . - . ID=gene-E3V42_05965;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=E3V42_05965 SOQV01000046.1 Protein Homology CDS 20993 21685 . - 0 ID=cds-TMR83946.1;Parent=gene-E3V42_05965;Dbxref=NCBI_GP:TMR83946.1;Name=TMR83946.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446509.1;locus_tag=E3V42_05965;product=cell division ATP-binding protein FtsE;protein_id=TMR83946.1;transl_table=11 SOQV01000046.1 Genbank gene 21703 22798 . - . ID=gene-E3V42_05970;Name=E3V42_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05970 SOQV01000046.1 Protein Homology CDS 22727 22798 . - 0 ID=cds-TMR83947.1;Parent=gene-E3V42_05970;Dbxref=NCBI_GP:TMR83947.1;Name=TMR83947.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=E3V42_05970;product=peptide chain release factor 2;protein_id=TMR83947.1;transl_table=11 SOQV01000046.1 Protein Homology CDS 21703 22725 . - 0 ID=cds-TMR83947.1;Parent=gene-E3V42_05970;Dbxref=NCBI_GP:TMR83947.1;Name=TMR83947.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=E3V42_05970;product=peptide chain release factor 2;protein_id=TMR83947.1;transl_table=11 SOQV01000046.1 Genbank gene 22906 23562 . - . ID=gene-E3V42_05975;Name=E3V42_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05975 SOQV01000046.1 Protein Homology CDS 22906 23562 . - 0 ID=cds-TMR83948.1;Parent=gene-E3V42_05975;Dbxref=NCBI_GP:TMR83948.1;Name=TMR83948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358258.1;locus_tag=E3V42_05975;product=CBS domain-containing protein;protein_id=TMR83948.1;transl_table=11 SOQV01000046.1 Genbank gene 23974 24684 . - . ID=gene-E3V42_05980;Name=E3V42_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05980 SOQV01000046.1 Protein Homology CDS 23974 24684 . - 0 ID=cds-TMR83949.1;Parent=gene-E3V42_05980;Dbxref=NCBI_GP:TMR83949.1;Name=TMR83949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=E3V42_05980;product=ABC transporter ATP-binding protein;protein_id=TMR83949.1;transl_table=11 SOQV01000046.1 Genbank gene 24684 25448 . - . ID=gene-E3V42_05985;Name=E3V42_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05985 SOQV01000046.1 Protein Homology CDS 24684 25448 . - 0 ID=cds-TMR83950.1;Parent=gene-E3V42_05985;Dbxref=NCBI_GP:TMR83950.1;Name=TMR83950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=E3V42_05985;product=ABC transporter ATP-binding protein;protein_id=TMR83950.1;transl_table=11 SOQV01000046.1 Genbank gene 25448 26404 . - . ID=gene-E3V42_05990;Name=E3V42_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05990 SOQV01000046.1 Protein Homology CDS 25448 26404 . - 0 ID=cds-TMR83951.1;Parent=gene-E3V42_05990;Dbxref=NCBI_GP:TMR83951.1;Name=TMR83951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358255.1;locus_tag=E3V42_05990;product=branched-chain amino acid ABC transporter permease;protein_id=TMR83951.1;transl_table=11 SOQV01000046.1 Genbank gene 26408 27277 . - . ID=gene-E3V42_05995;Name=E3V42_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_05995 SOQV01000046.1 Protein Homology CDS 26408 27277 . - 0 ID=cds-TMR83952.1;Parent=gene-E3V42_05995;Dbxref=NCBI_GP:TMR83952.1;Name=TMR83952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446516.1;locus_tag=E3V42_05995;product=branched-chain amino acid ABC transporter permease;protein_id=TMR83952.1;transl_table=11 SOQV01000046.1 Genbank gene 27394 28554 . - . ID=gene-E3V42_06000;Name=E3V42_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06000 SOQV01000046.1 Protein Homology CDS 27394 28554 . - 0 ID=cds-TMR83953.1;Parent=gene-E3V42_06000;Dbxref=NCBI_GP:TMR83953.1;Name=TMR83953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358253.1;locus_tag=E3V42_06000;product=ABC transporter substrate-binding protein;protein_id=TMR83953.1;transl_table=11 SOQV01000046.1 Genbank gene 28657 28905 . - . ID=gene-E3V42_06005;Name=E3V42_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06005 SOQV01000046.1 Protein Homology CDS 28657 28905 . - 0 ID=cds-TMR83954.1;Parent=gene-E3V42_06005;Dbxref=NCBI_GP:TMR83954.1;Name=TMR83954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358251.1;locus_tag=E3V42_06005;product=DUF2129 domain-containing protein;protein_id=TMR83954.1;transl_table=11 SOQV01000046.1 Genbank gene 28889 28987 . + . ID=gene-E3V42_06010;Name=E3V42_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06010 SOQV01000046.1 Protein Homology CDS 28889 28987 . + 0 ID=cds-TMR83955.1;Parent=gene-E3V42_06010;Dbxref=NCBI_GP:TMR83955.1;Name=TMR83955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809256.1;locus_tag=E3V42_06010;product=Clp protease;protein_id=TMR83955.1;transl_table=11 SOQV01000046.1 Genbank gene 28984 29574 . - . ID=gene-E3V42_06015;Name=E3V42_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06015 SOQV01000046.1 Protein Homology CDS 28984 29574 . - 0 ID=cds-TMR83956.1;Parent=gene-E3V42_06015;Dbxref=NCBI_GP:TMR83956.1;Name=TMR83956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446519.1;locus_tag=E3V42_06015;product=ATP-dependent Clp protease proteolytic subunit;protein_id=TMR83956.1;transl_table=11 SOQV01000046.1 Genbank gene 29748 30377 . - . ID=gene-E3V42_06020;Name=E3V42_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06020 SOQV01000046.1 Protein Homology CDS 29748 30377 . - 0 ID=cds-TMR83957.1;Parent=gene-E3V42_06020;Dbxref=NCBI_GP:TMR83957.1;Name=TMR83957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446520.1;locus_tag=E3V42_06020;product=uracil phosphoribosyltransferase;protein_id=TMR83957.1;transl_table=11 SOQV01000046.1 Genbank gene 30466 30933 . - . ID=gene-E3V42_06025;Name=E3V42_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06025 SOQV01000046.1 Protein Homology CDS 30466 30933 . - 0 ID=cds-TMR83958.1;Parent=gene-E3V42_06025;Dbxref=NCBI_GP:TMR83958.1;Name=TMR83958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358248.1;locus_tag=E3V42_06025;product=deoxycytidylate deaminase;protein_id=TMR83958.1;transl_table=11 SOQV01000046.1 Genbank gene 30952 31509 . - . ID=gene-E3V42_06030;Name=E3V42_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06030 SOQV01000046.1 Protein Homology CDS 30952 31509 . - 0 ID=cds-TMR83959.1;Parent=gene-E3V42_06030;Dbxref=NCBI_GP:TMR83959.1;Name=TMR83959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358247.1;locus_tag=E3V42_06030;product=TetR/AcrR family transcriptional regulator;protein_id=TMR83959.1;transl_table=11 SOQV01000046.1 Genbank gene 31634 32479 . + . ID=gene-E3V42_06035;Name=E3V42_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06035 SOQV01000046.1 Protein Homology CDS 31634 32479 . + 0 ID=cds-TMR83960.1;Parent=gene-E3V42_06035;Dbxref=NCBI_GP:TMR83960.1;Name=TMR83960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358246.1;locus_tag=E3V42_06035;product=DegV family protein;protein_id=TMR83960.1;transl_table=11 SOQV01000046.1 Genbank gene 32538 33713 . + . ID=gene-E3V42_06040;Name=E3V42_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06040 SOQV01000046.1 Protein Homology CDS 32538 33713 . + 0 ID=cds-TMR83961.1;Parent=gene-E3V42_06040;Dbxref=NCBI_GP:TMR83961.1;Name=TMR83961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677051.1;locus_tag=E3V42_06040;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=TMR83961.1;transl_table=11 SOQV01000046.1 Genbank gene 33756 34496 . - . ID=gene-E3V42_06045;Name=E3V42_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06045 SOQV01000046.1 Protein Homology CDS 33756 34496 . - 0 ID=cds-TMR83962.1;Parent=gene-E3V42_06045;Dbxref=NCBI_GP:TMR83962.1;Name=TMR83962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446527.1;locus_tag=E3V42_06045;product=MerR family transcriptional regulator;protein_id=TMR83962.1;transl_table=11 SOQV01000046.1 Genbank pseudogene 34516 34618 . + . ID=gene-E3V42_06050;Name=E3V42_06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06050;pseudo=true SOQV01000046.1 Protein Homology CDS 34516 34618 . + 0 ID=cds-E3V42_06050;Parent=gene-E3V42_06050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_06050;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000046.1 Genbank pseudogene 34836 36175 . + . ID=gene-E3V42_06055;Name=E3V42_06055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06055;pseudo=true SOQV01000046.1 Protein Homology CDS 34836 36175 . + 0 ID=cds-E3V42_06055;Parent=gene-E3V42_06055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446528.1;locus_tag=E3V42_06055;product=sodium-dependent transporter;pseudo=true;transl_table=11 SOQV01000046.1 Genbank gene 36215 37159 . - . ID=gene-E3V42_06060;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=E3V42_06060 SOQV01000046.1 Protein Homology CDS 36215 37159 . - 0 ID=cds-TMR83963.1;Parent=gene-E3V42_06060;Dbxref=NCBI_GP:TMR83963.1;Name=TMR83963.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446529.1;locus_tag=E3V42_06060;product=mannose-6-phosphate isomerase%2C class I;protein_id=TMR83963.1;transl_table=11 SOQV01000046.1 Genbank gene 37281 37577 . - . ID=gene-E3V42_06065;Name=E3V42_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06065 SOQV01000046.1 Protein Homology CDS 37281 37577 . - 0 ID=cds-TMR83964.1;Parent=gene-E3V42_06065;Dbxref=NCBI_GP:TMR83964.1;Name=TMR83964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380707.1;locus_tag=E3V42_06065;product=glycosyl hydrolase family protein;protein_id=TMR83964.1;transl_table=11 SOQV01000046.1 Genbank gene 37642 37798 . + . ID=gene-E3V42_06070;Name=E3V42_06070;end_range=37798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06070;partial=true SOQV01000046.1 Protein Homology CDS 37642 37798 . + 0 ID=cds-TMR83965.1;Parent=gene-E3V42_06070;Dbxref=NCBI_GP:TMR83965.1;Name=TMR83965.1;end_range=37798,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_06070;partial=true;product=IS630 family transposase;protein_id=TMR83965.1;transl_table=11 ##sequence-region SOQV01000047.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000047.1 Genbank region 1 550 . + . ID=SOQV01000047.1:1..550;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000047.1 Genbank gene 1 103 . - . ID=gene-E3V42_06075;Name=E3V42_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06075;partial=true;start_range=.,1 SOQV01000047.1 Protein Homology CDS 1 103 . - 0 ID=cds-TMR83903.1;Parent=gene-E3V42_06075;Dbxref=NCBI_GP:TMR83903.1;Name=TMR83903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V42_06075;partial=true;product=transposase domain-containing protein;protein_id=TMR83903.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000048.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000048.1 Genbank region 1 1118 . + . ID=SOQV01000048.1:1..1118;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000048.1 Genbank gene 1 1118 . + . ID=gene-E3V42_06080;Name=E3V42_06080;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06080;partial=true;start_range=.,1 SOQV01000048.1 Protein Homology CDS 1 1118 . + 2 ID=cds-TMR83902.1;Parent=gene-E3V42_06080;Dbxref=NCBI_GP:TMR83902.1;Name=TMR83902.1;end_range=1118,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_06080;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR83902.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000049.1 1 45343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000049.1 Genbank region 1 45343 . + . ID=SOQV01000049.1:1..45343;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000049.1 Genbank gene 1 2468 . - . ID=gene-E3V42_06085;Name=E3V42_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06085;partial=true;start_range=.,1 SOQV01000049.1 Protein Homology CDS 1 2468 . - 0 ID=cds-TMR83828.1;Parent=gene-E3V42_06085;Dbxref=NCBI_GP:TMR83828.1;Name=TMR83828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=E3V42_06085;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=TMR83828.1;start_range=.,1;transl_table=11 SOQV01000049.1 Genbank gene 2576 2827 . - . ID=gene-E3V42_06090;Name=E3V42_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06090 SOQV01000049.1 Protein Homology CDS 2576 2827 . - 0 ID=cds-TMR83829.1;Parent=gene-E3V42_06090;Dbxref=NCBI_GP:TMR83829.1;Name=TMR83829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598576.1;locus_tag=E3V42_06090;product=hypothetical protein;protein_id=TMR83829.1;transl_table=11 SOQV01000049.1 Genbank pseudogene 3093 3603 . - . ID=gene-E3V42_06095;Name=E3V42_06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06095;pseudo=true SOQV01000049.1 Protein Homology CDS 3093 3603 . - 0 ID=cds-E3V42_06095;Parent=gene-E3V42_06095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186956.1;locus_tag=E3V42_06095;product=DUF4231 domain-containing protein;pseudo=true;transl_table=11 SOQV01000049.1 Genbank pseudogene 3699 4500 . - . ID=gene-E3V42_06100;Name=E3V42_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06100;pseudo=true SOQV01000049.1 Protein Homology CDS 3699 4500 . - 0 ID=cds-E3V42_06100;Parent=gene-E3V42_06100;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_06100;product=IS5 family transposase;pseudo=true;transl_table=11 SOQV01000049.1 Genbank pseudogene 4754 4948 . + . ID=gene-E3V42_06105;Name=E3V42_06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06105;pseudo=true SOQV01000049.1 Protein Homology CDS 4754 4948 . + 0 ID=cds-E3V42_06105;Parent=gene-E3V42_06105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V42_06105;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 SOQV01000049.1 Genbank gene 5080 5964 . - . ID=gene-E3V42_06110;Name=E3V42_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06110 SOQV01000049.1 Protein Homology CDS 5080 5964 . - 0 ID=cds-TMR83830.1;Parent=gene-E3V42_06110;Dbxref=NCBI_GP:TMR83830.1;Name=TMR83830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358115.1;locus_tag=E3V42_06110;product=PucR family transcriptional regulator;protein_id=TMR83830.1;transl_table=11 SOQV01000049.1 Genbank gene 5968 6354 . - . ID=gene-E3V42_06115;Name=E3V42_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06115 SOQV01000049.1 Protein Homology CDS 5968 6354 . - 0 ID=cds-TMR83831.1;Parent=gene-E3V42_06115;Dbxref=NCBI_GP:TMR83831.1;Name=TMR83831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446696.1;locus_tag=E3V42_06115;product=Mini-ribonuclease 3;protein_id=TMR83831.1;transl_table=11 SOQV01000049.1 Genbank gene 6347 7690 . - . ID=gene-E3V42_06120;Name=E3V42_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06120 SOQV01000049.1 Protein Homology CDS 6347 7690 . - 0 ID=cds-TMR83832.1;Parent=gene-E3V42_06120;Dbxref=NCBI_GP:TMR83832.1;Name=TMR83832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358113.1;locus_tag=E3V42_06120;product=cysteine--tRNA ligase;protein_id=TMR83832.1;transl_table=11 SOQV01000049.1 Genbank gene 7580 7831 . + . ID=gene-E3V42_06125;Name=E3V42_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06125 SOQV01000049.1 Protein Homology CDS 7580 7831 . + 0 ID=cds-TMR83833.1;Parent=gene-E3V42_06125;Dbxref=NCBI_GP:TMR83833.1;Name=TMR83833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822012.1;locus_tag=E3V42_06125;product=hypothetical protein;protein_id=TMR83833.1;transl_table=11 SOQV01000049.1 Genbank gene 7773 8657 . - . ID=gene-E3V42_06130;Name=E3V42_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06130 SOQV01000049.1 Protein Homology CDS 7773 8657 . - 0 ID=cds-TMR83834.1;Parent=gene-E3V42_06130;Dbxref=NCBI_GP:TMR83834.1;Name=TMR83834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446698.1;locus_tag=E3V42_06130;product=GNAT family N-acetyltransferase;protein_id=TMR83834.1;transl_table=11 SOQV01000049.1 Genbank gene 8669 9286 . - . ID=gene-E3V42_06135;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=E3V42_06135 SOQV01000049.1 Protein Homology CDS 8669 9286 . - 0 ID=cds-TMR83835.1;Parent=gene-E3V42_06135;Dbxref=NCBI_GP:TMR83835.1;Name=TMR83835.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358111.1;locus_tag=E3V42_06135;product=serine O-acetyltransferase;protein_id=TMR83835.1;transl_table=11 SOQV01000049.1 Genbank gene 9302 11515 . - . ID=gene-E3V42_06140;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=E3V42_06140 SOQV01000049.1 Protein Homology CDS 9302 11515 . - 0 ID=cds-TMR83836.1;Parent=gene-E3V42_06140;Dbxref=NCBI_GP:TMR83836.1;Name=TMR83836.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446700.1;locus_tag=E3V42_06140;product=polyribonucleotide nucleotidyltransferase;protein_id=TMR83836.1;transl_table=11 SOQV01000049.1 Genbank gene 11622 11840 . + . ID=gene-E3V42_06145;Name=E3V42_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06145 SOQV01000049.1 Protein Homology CDS 11622 11840 . + 0 ID=cds-TMR83837.1;Parent=gene-E3V42_06145;Dbxref=NCBI_GP:TMR83837.1;Name=TMR83837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811622.1;locus_tag=E3V42_06145;product=hypothetical protein;protein_id=TMR83837.1;transl_table=11 SOQV01000049.1 Genbank gene 12356 13222 . - . ID=gene-E3V42_06150;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=E3V42_06150 SOQV01000049.1 Protein Homology CDS 12356 13222 . - 0 ID=cds-TMR83838.1;Parent=gene-E3V42_06150;Dbxref=NCBI_GP:TMR83838.1;Name=TMR83838.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446701.1;locus_tag=E3V42_06150;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=TMR83838.1;transl_table=11 SOQV01000049.1 Genbank gene 13325 15574 . - . ID=gene-E3V42_06155;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=E3V42_06155 SOQV01000049.1 Protein Homology CDS 13325 15574 . - 0 ID=cds-TMR83839.1;Parent=gene-E3V42_06155;Dbxref=NCBI_GP:TMR83839.1;Name=TMR83839.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446702.1;locus_tag=E3V42_06155;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TMR83839.1;transl_table=11 SOQV01000049.1 Genbank gene 15853 15969 . - . ID=gene-E3V42_06160;Name=E3V42_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06160 SOQV01000049.1 Protein Homology CDS 15853 15969 . - 0 ID=cds-TMR83840.1;Parent=gene-E3V42_06160;Dbxref=NCBI_GP:TMR83840.1;Name=TMR83840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=E3V42_06160;product=chlorohydrolase;protein_id=TMR83840.1;transl_table=11 SOQV01000049.1 Genbank gene 15990 16283 . - . ID=gene-E3V42_06165;Name=E3V42_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06165 SOQV01000049.1 Protein Homology CDS 15990 16283 . - 0 ID=cds-TMR83841.1;Parent=gene-E3V42_06165;Dbxref=NCBI_GP:TMR83841.1;Name=TMR83841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797743.1;locus_tag=E3V42_06165;product=XRE family transcriptional regulator;protein_id=TMR83841.1;transl_table=11 SOQV01000049.1 Genbank pseudogene 16342 16827 . - . ID=gene-E3V42_06170;Name=E3V42_06170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06170;pseudo=true SOQV01000049.1 Protein Homology CDS 16342 16827 . - 0 ID=cds-E3V42_06170;Parent=gene-E3V42_06170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_06170;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000049.1 Genbank gene 16984 17985 . + . ID=gene-E3V42_06175;Name=E3V42_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06175 SOQV01000049.1 Protein Homology CDS 16984 17985 . + 0 ID=cds-TMR83842.1;Parent=gene-E3V42_06175;Dbxref=NCBI_GP:TMR83842.1;Name=TMR83842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358104.1;locus_tag=E3V42_06175;product=endonuclease/exonuclease/phosphatase family protein;protein_id=TMR83842.1;transl_table=11 SOQV01000049.1 Genbank gene 18053 20458 . - . ID=gene-E3V42_06180;Name=E3V42_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06180 SOQV01000049.1 Protein Homology CDS 18053 20458 . - 0 ID=cds-TMR83843.1;Parent=gene-E3V42_06180;Dbxref=NCBI_GP:TMR83843.1;Name=TMR83843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446901.1;locus_tag=E3V42_06180;product=phenylalanine--tRNA ligase subunit beta;protein_id=TMR83843.1;transl_table=11 SOQV01000049.1 Genbank gene 20535 21044 . - . ID=gene-E3V42_06185;Name=E3V42_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06185 SOQV01000049.1 Protein Homology CDS 20535 21044 . - 0 ID=cds-TMR83844.1;Parent=gene-E3V42_06185;Dbxref=NCBI_GP:TMR83844.1;Name=TMR83844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358102.1;locus_tag=E3V42_06185;product=N-acetyltransferase;protein_id=TMR83844.1;transl_table=11 SOQV01000049.1 Genbank gene 21044 22090 . - . ID=gene-E3V42_06190;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=E3V42_06190 SOQV01000049.1 Protein Homology CDS 21044 22090 . - 0 ID=cds-TMR83845.1;Parent=gene-E3V42_06190;Dbxref=NCBI_GP:TMR83845.1;Name=TMR83845.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358101.2;locus_tag=E3V42_06190;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TMR83845.1;transl_table=11 SOQV01000049.1 Genbank gene 22682 24097 . - . ID=gene-E3V42_06195;Name=E3V42_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06195 SOQV01000049.1 Protein Homology CDS 22682 24097 . - 0 ID=cds-TMR83846.1;Parent=gene-E3V42_06195;Dbxref=NCBI_GP:TMR83846.1;Name=TMR83846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358100.1;locus_tag=E3V42_06195;product=glycoside hydrolase family 1 protein;protein_id=TMR83846.1;transl_table=11 SOQV01000049.1 Genbank gene 24110 25948 . - . ID=gene-E3V42_06200;Name=E3V42_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06200 SOQV01000049.1 Protein Homology CDS 24110 25948 . - 0 ID=cds-TMR83847.1;Parent=gene-E3V42_06200;Dbxref=NCBI_GP:TMR83847.1;Name=TMR83847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358099.1;locus_tag=E3V42_06200;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=TMR83847.1;transl_table=11 SOQV01000049.1 Genbank gene 25966 26805 . - . ID=gene-E3V42_06205;Name=E3V42_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06205 SOQV01000049.1 Protein Homology CDS 25966 26805 . - 0 ID=cds-TMR83848.1;Parent=gene-E3V42_06205;Dbxref=NCBI_GP:TMR83848.1;Name=TMR83848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358098.1;locus_tag=E3V42_06205;product=PRD domain-containing protein;protein_id=TMR83848.1;transl_table=11 SOQV01000049.1 Genbank gene 27105 29783 . - . ID=gene-E3V42_06210;Name=E3V42_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06210 SOQV01000049.1 Protein Homology CDS 27105 29783 . - 0 ID=cds-TMR83849.1;Parent=gene-E3V42_06210;Dbxref=NCBI_GP:TMR83849.1;Name=TMR83849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445534.1;locus_tag=E3V42_06210;product=DEAD/DEAH box helicase;protein_id=TMR83849.1;transl_table=11 SOQV01000049.1 Genbank gene 30055 30858 . - . ID=gene-E3V42_06215;Name=E3V42_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06215 SOQV01000049.1 Protein Homology CDS 30055 30858 . - 0 ID=cds-TMR83850.1;Parent=gene-E3V42_06215;Dbxref=NCBI_GP:TMR83850.1;Name=TMR83850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358088.1;locus_tag=E3V42_06215;product=cell filamentation protein Fic;protein_id=TMR83850.1;transl_table=11 SOQV01000049.1 Genbank gene 31215 31781 . - . ID=gene-E3V42_06220;Name=E3V42_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06220 SOQV01000049.1 Protein Homology CDS 31215 31781 . - 0 ID=cds-TMR83851.1;Parent=gene-E3V42_06220;Dbxref=NCBI_GP:TMR83851.1;Name=TMR83851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253751.1;locus_tag=E3V42_06220;product=hypothetical protein;protein_id=TMR83851.1;transl_table=11 SOQV01000049.1 Genbank gene 31771 33114 . - . ID=gene-E3V42_06225;Name=E3V42_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06225 SOQV01000049.1 Protein Homology CDS 31771 33114 . - 0 ID=cds-TMR83852.1;Parent=gene-E3V42_06225;Dbxref=NCBI_GP:TMR83852.1;Name=TMR83852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778677.1;locus_tag=E3V42_06225;product=ATP-binding protein;protein_id=TMR83852.1;transl_table=11 SOQV01000049.1 Genbank gene 33221 35872 . - . ID=gene-E3V42_06230;Name=E3V42_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06230 SOQV01000049.1 Protein Homology CDS 33221 35872 . - 0 ID=cds-TMR83853.1;Parent=gene-E3V42_06230;Dbxref=NCBI_GP:TMR83853.1;Name=TMR83853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732359.1;locus_tag=E3V42_06230;product=valine--tRNA ligase;protein_id=TMR83853.1;transl_table=11 SOQV01000049.1 Genbank gene 35999 37000 . - . ID=gene-E3V42_06235;Name=E3V42_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06235 SOQV01000049.1 Protein Homology CDS 35999 37000 . - 0 ID=cds-TMR83854.1;Parent=gene-E3V42_06235;Dbxref=NCBI_GP:TMR83854.1;Name=TMR83854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147018.1;locus_tag=E3V42_06235;product=cell filamentation protein Fic;protein_id=TMR83854.1;transl_table=11 SOQV01000049.1 Genbank gene 37032 38273 . - . ID=gene-E3V42_06240;Name=E3V42_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06240 SOQV01000049.1 Protein Homology CDS 37032 38273 . - 0 ID=cds-TMR83855.1;Parent=gene-E3V42_06240;Dbxref=NCBI_GP:TMR83855.1;Name=TMR83855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085117.1;locus_tag=E3V42_06240;product=hypothetical protein;protein_id=TMR83855.1;transl_table=11 SOQV01000049.1 Genbank pseudogene 38572 39737 . - . ID=gene-E3V42_06245;Name=E3V42_06245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06245;pseudo=true SOQV01000049.1 Protein Homology CDS 38572 39737 . - 0 ID=cds-E3V42_06245;Parent=gene-E3V42_06245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237271.1;locus_tag=E3V42_06245;product=beta-carotene 15%2C15'-monooxygenase;pseudo=true;transl_table=11 SOQV01000049.1 Genbank gene 39929 40126 . - . ID=gene-E3V42_06250;Name=E3V42_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06250 SOQV01000049.1 GeneMarkS-2+ CDS 39929 40126 . - 0 ID=cds-TMR83856.1;Parent=gene-E3V42_06250;Dbxref=NCBI_GP:TMR83856.1;Name=TMR83856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_06250;product=hypothetical protein;protein_id=TMR83856.1;transl_table=11 SOQV01000049.1 Genbank gene 40423 41001 . - . ID=gene-E3V42_06255;Name=E3V42_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06255 SOQV01000049.1 Protein Homology CDS 40423 41001 . - 0 ID=cds-TMR83857.1;Parent=gene-E3V42_06255;Dbxref=NCBI_GP:TMR83857.1;Name=TMR83857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445528.1;locus_tag=E3V42_06255;product=shikimate kinase;protein_id=TMR83857.1;transl_table=11 SOQV01000049.1 Genbank gene 41001 41561 . - . ID=gene-E3V42_06260;Name=E3V42_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06260 SOQV01000049.1 Protein Homology CDS 41001 41561 . - 0 ID=cds-TMR83858.1;Parent=gene-E3V42_06260;Dbxref=NCBI_GP:TMR83858.1;Name=TMR83858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445527.1;locus_tag=E3V42_06260;product=N-acetyltransferase;protein_id=TMR83858.1;transl_table=11 SOQV01000049.1 Genbank pseudogene 41548 42125 . - . ID=gene-E3V42_06265;Name=E3V42_06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06265;pseudo=true SOQV01000049.1 Protein Homology CDS 41548 42125 . - 0 ID=cds-E3V42_06265;Parent=gene-E3V42_06265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445526.1;locus_tag=E3V42_06265;product=flavin reductase family protein;pseudo=true;transl_table=11 SOQV01000049.1 Genbank gene 42408 42803 . - . ID=gene-E3V42_06270;Name=E3V42_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06270 SOQV01000049.1 Protein Homology CDS 42408 42803 . - 0 ID=cds-TMR83859.1;Parent=gene-E3V42_06270;Dbxref=NCBI_GP:TMR83859.1;Name=TMR83859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358082.1;locus_tag=E3V42_06270;product=helicase;protein_id=TMR83859.1;transl_table=11 SOQV01000049.1 Genbank gene 42899 43153 . - . ID=gene-E3V42_06275;Name=E3V42_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06275 SOQV01000049.1 Protein Homology CDS 42899 43153 . - 0 ID=cds-TMR83860.1;Parent=gene-E3V42_06275;Dbxref=NCBI_GP:TMR83860.1;Name=TMR83860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358081.1;locus_tag=E3V42_06275;product=DUF1912 family protein;protein_id=TMR83860.1;transl_table=11 SOQV01000049.1 Genbank gene 43163 44497 . - . ID=gene-E3V42_06280;Name=E3V42_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06280 SOQV01000049.1 Protein Homology CDS 43163 44497 . - 0 ID=cds-TMR83861.1;Parent=gene-E3V42_06280;Dbxref=NCBI_GP:TMR83861.1;Name=TMR83861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445523.1;locus_tag=E3V42_06280;product=DUF438 domain-containing protein;protein_id=TMR83861.1;transl_table=11 SOQV01000049.1 Genbank gene 44497 44730 . - . ID=gene-E3V42_06285;Name=E3V42_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06285 SOQV01000049.1 Protein Homology CDS 44497 44730 . - 0 ID=cds-TMR83862.1;Parent=gene-E3V42_06285;Dbxref=NCBI_GP:TMR83862.1;Name=TMR83862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445522.1;locus_tag=E3V42_06285;product=DUF1858 domain-containing protein;protein_id=TMR83862.1;transl_table=11 SOQV01000049.1 Genbank gene 45029 45343 . - . ID=gene-E3V42_06290;Name=E3V42_06290;end_range=45343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06290;partial=true SOQV01000049.1 Protein Homology CDS 45029 45343 . - 0 ID=cds-TMR83863.1;Parent=gene-E3V42_06290;Dbxref=NCBI_GP:TMR83863.1;Name=TMR83863.1;end_range=45343,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_06290;partial=true;product=IS630 family transposase;protein_id=TMR83863.1;transl_table=11 ##sequence-region SOQV01000005.1 1 21222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000005.1 Genbank region 1 21222 . + . ID=SOQV01000005.1:1..21222;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000005.1 Genbank gene 236 595 . - . ID=gene-E3V42_00475;Name=E3V42_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00475 SOQV01000005.1 Protein Homology CDS 236 595 . - 0 ID=cds-TMR85525.1;Parent=gene-E3V42_00475;Dbxref=NCBI_GP:TMR85525.1;Name=TMR85525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235657.1;locus_tag=E3V42_00475;product=integrase;protein_id=TMR85525.1;transl_table=11 SOQV01000005.1 Genbank pseudogene 701 856 . + . ID=gene-E3V42_00480;Name=E3V42_00480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00480;pseudo=true SOQV01000005.1 Protein Homology CDS 701 856 . + 0 ID=cds-E3V42_00480;Parent=gene-E3V42_00480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358541.1;locus_tag=E3V42_00480;product=diacylglycerol kinase family lipid kinase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank gene 1054 4329 . + . ID=gene-E3V42_00485;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=E3V42_00485 SOQV01000005.1 Protein Homology CDS 1054 4329 . + 0 ID=cds-TMR85518.1;Parent=gene-E3V42_00485;Dbxref=NCBI_GP:TMR85518.1;Name=TMR85518.1;gbkey=CDS;gene=rexB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446179.1;locus_tag=E3V42_00485;product=ATP-dependent nuclease subunit B;protein_id=TMR85518.1;transl_table=11 SOQV01000005.1 Genbank gene 4326 7976 . + . ID=gene-E3V42_00490;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=E3V42_00490 SOQV01000005.1 Protein Homology CDS 4326 7976 . + 0 ID=cds-TMR85519.1;Parent=gene-E3V42_00490;Dbxref=NCBI_GP:TMR85519.1;Name=TMR85519.1;gbkey=CDS;gene=addA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358634.1;locus_tag=E3V42_00490;product=helicase-exonuclease AddAB subunit AddA;protein_id=TMR85519.1;transl_table=11 SOQV01000005.1 Genbank pseudogene 8139 8213 . - . ID=gene-E3V42_00495;Name=E3V42_00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00495;pseudo=true SOQV01000005.1 Protein Homology CDS 8139 8213 . - 0 ID=cds-E3V42_00495;Parent=gene-E3V42_00495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_00495;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank gene 8236 9414 . + . ID=gene-E3V42_00500;Name=E3V42_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00500 SOQV01000005.1 Protein Homology CDS 8236 9414 . + 0 ID=cds-TMR85520.1;Parent=gene-E3V42_00500;Dbxref=NCBI_GP:TMR85520.1;Name=TMR85520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358635.1;locus_tag=E3V42_00500;product=hypothetical protein;protein_id=TMR85520.1;transl_table=11 SOQV01000005.1 Genbank pseudogene 9653 10615 . + . ID=gene-E3V42_00505;Name=E3V42_00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00505;pseudo=true SOQV01000005.1 Protein Homology CDS 9653 10615 . + 0 ID=cds-E3V42_00505;Parent=gene-E3V42_00505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417170.1;locus_tag=E3V42_00505;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 11144 11365 . + . ID=gene-E3V42_00510;Name=E3V42_00510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00510;pseudo=true SOQV01000005.1 Protein Homology CDS 11144 11365 . + 0 ID=cds-E3V42_00510;Parent=gene-E3V42_00510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07554.11;locus_tag=E3V42_00510;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 11573 11800 . + . ID=gene-E3V42_00515;Name=E3V42_00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00515;pseudo=true SOQV01000005.1 Protein Homology CDS 11573 11800 . + 0 ID=cds-E3V42_00515;Parent=gene-E3V42_00515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07554.11;locus_tag=E3V42_00515;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 12008 12235 . + . ID=gene-E3V42_00520;Name=E3V42_00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00520;pseudo=true SOQV01000005.1 Protein Homology CDS 12008 12235 . + 0 ID=cds-E3V42_00520;Parent=gene-E3V42_00520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07554.11;locus_tag=E3V42_00520;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 12302 12677 . + . ID=gene-E3V42_00525;Name=E3V42_00525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00525;pseudo=true SOQV01000005.1 Protein Homology CDS 12302 12677 . + 0 ID=cds-E3V42_00525;Parent=gene-E3V42_00525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856705.1;locus_tag=E3V42_00525;product=peptidase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 12650 16573 . + . ID=gene-E3V42_00530;Name=E3V42_00530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00530;pseudo=true SOQV01000005.1 Protein Homology CDS 12650 16573 . + 0 ID=cds-E3V42_00530;Parent=gene-E3V42_00530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417196.1;locus_tag=E3V42_00530;product=peptidase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 16616 16705 . + . ID=gene-E3V42_00535;Name=E3V42_00535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00535;pseudo=true SOQV01000005.1 Protein Homology CDS 16616 16705 . + 0 ID=cds-E3V42_00535;Parent=gene-E3V42_00535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834334.1;locus_tag=E3V42_00535;product=peptidase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank gene 16783 16941 . - . ID=gene-E3V42_00540;Name=E3V42_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00540 SOQV01000005.1 Protein Homology CDS 16783 16941 . - 0 ID=cds-TMR85526.1;Parent=gene-E3V42_00540;Dbxref=NCBI_GP:TMR85526.1;Name=TMR85526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=E3V42_00540;product=transposase domain-containing protein;protein_id=TMR85526.1;transl_table=11 SOQV01000005.1 Genbank gene 17012 17116 . - . ID=gene-E3V42_00545;Name=E3V42_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00545 SOQV01000005.1 Protein Homology CDS 17012 17116 . - 0 ID=cds-TMR85521.1;Parent=gene-E3V42_00545;Dbxref=NCBI_GP:TMR85521.1;Name=TMR85521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03050.12;locus_tag=E3V42_00545;product=hypothetical protein;protein_id=TMR85521.1;transl_table=11 SOQV01000005.1 Genbank pseudogene 17113 17463 . - . ID=gene-E3V42_00550;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=E3V42_00550;pseudo=true SOQV01000005.1 Protein Homology CDS 17113 17463 . - 0 ID=cds-E3V42_00550;Parent=gene-E3V42_00550;Note=internal stop;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V42_00550;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 SOQV01000005.1 Genbank pseudogene 17553 17630 . - . ID=gene-E3V42_00555;Name=E3V42_00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00555;pseudo=true SOQV01000005.1 Protein Homology CDS 17553 17630 . - 0 ID=cds-E3V42_00555;Parent=gene-E3V42_00555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=E3V42_00555;product=cytidylate kinase;pseudo=true;transl_table=11 SOQV01000005.1 Genbank gene 17833 18684 . + . ID=gene-E3V42_00560;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=E3V42_00560 SOQV01000005.1 Protein Homology CDS 17833 18684 . + 0 ID=cds-TMR85522.1;Parent=gene-E3V42_00560;Dbxref=NCBI_GP:TMR85522.1;Name=TMR85522.1;gbkey=CDS;gene=ylqF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358637.1;locus_tag=E3V42_00560;product=ribosome biogenesis GTPase YlqF;protein_id=TMR85522.1;transl_table=11 SOQV01000005.1 Genbank gene 18671 19450 . + . ID=gene-E3V42_00565;Name=E3V42_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00565 SOQV01000005.1 Protein Homology CDS 18671 19450 . + 0 ID=cds-TMR85523.1;Parent=gene-E3V42_00565;Dbxref=NCBI_GP:TMR85523.1;Name=TMR85523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358638.1;locus_tag=E3V42_00565;product=ribonuclease HII;protein_id=TMR85523.1;transl_table=11 SOQV01000005.1 Genbank gene 19466 21016 . + . ID=gene-E3V42_00570;Name=E3V42_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00570 SOQV01000005.1 Protein Homology CDS 19466 21016 . + 0 ID=cds-TMR85524.1;Parent=gene-E3V42_00570;Dbxref=NCBI_GP:TMR85524.1;Name=TMR85524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446173.1;locus_tag=E3V42_00570;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=TMR85524.1;transl_table=11 ##sequence-region SOQV01000050.1 1 16998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000050.1 Genbank region 1 16998 . + . ID=SOQV01000050.1:1..16998;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000050.1 Genbank pseudogene 1 430 . + . ID=gene-E3V42_06295;Name=E3V42_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06295;pseudo=true SOQV01000050.1 Protein Homology CDS 1 430 . + 1 ID=cds-E3V42_06295;Parent=gene-E3V42_06295;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_06295;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000050.1 Genbank gene 481 1431 . + . ID=gene-E3V42_06300;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=E3V42_06300 SOQV01000050.1 Protein Homology CDS 481 1431 . + 0 ID=cds-TMR83804.1;Parent=gene-E3V42_06300;Dbxref=NCBI_GP:TMR83804.1;Name=TMR83804.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446868.1;locus_tag=E3V42_06300;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=TMR83804.1;transl_table=11 SOQV01000050.1 Genbank gene 1443 1760 . + . ID=gene-E3V42_06305;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=E3V42_06305 SOQV01000050.1 Protein Homology CDS 1443 1760 . + 0 ID=cds-TMR83814.1;Parent=gene-E3V42_06305;Dbxref=NCBI_GP:TMR83814.1;Name=TMR83814.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357897.1;locus_tag=E3V42_06305;product=cell division protein FtsL;protein_id=TMR83814.1;transl_table=11 SOQV01000050.1 Genbank gene 1764 4016 . + . ID=gene-E3V42_06310;Name=E3V42_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06310 SOQV01000050.1 Protein Homology CDS 1764 4016 . + 0 ID=cds-TMR83805.1;Parent=gene-E3V42_06310;Dbxref=NCBI_GP:TMR83805.1;Name=TMR83805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357898.1;locus_tag=E3V42_06310;product=PASTA domain-containing protein;protein_id=TMR83805.1;transl_table=11 SOQV01000050.1 Genbank gene 4018 4998 . + . ID=gene-E3V42_06315;Name=E3V42_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06315 SOQV01000050.1 Protein Homology CDS 4018 4998 . + 0 ID=cds-TMR83806.1;Parent=gene-E3V42_06315;Dbxref=NCBI_GP:TMR83806.1;Name=TMR83806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357899.1;locus_tag=E3V42_06315;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=TMR83806.1;transl_table=11 SOQV01000050.1 Genbank gene 5161 5256 . - . ID=gene-E3V42_06320;Name=E3V42_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06320 SOQV01000050.1 Protein Homology CDS 5161 5256 . - 0 ID=cds-TMR83807.1;Parent=gene-E3V42_06320;Dbxref=NCBI_GP:TMR83807.1;Name=TMR83807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_06320;product=DNA alkylation repair protein;protein_id=TMR83807.1;transl_table=11 SOQV01000050.1 Genbank gene 5548 7653 . + . ID=gene-E3V42_06325;Name=E3V42_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06325 SOQV01000050.1 Protein Homology CDS 5548 7653 . + 0 ID=cds-TMR83808.1;Parent=gene-E3V42_06325;Dbxref=NCBI_GP:TMR83808.1;Name=TMR83808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446864.1;locus_tag=E3V42_06325;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR83808.1;transl_table=11 SOQV01000050.1 Genbank gene 7713 8195 . - . ID=gene-E3V42_06330;Name=E3V42_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06330 SOQV01000050.1 Protein Homology CDS 7713 8195 . - 0 ID=cds-TMR83809.1;Parent=gene-E3V42_06330;Dbxref=NCBI_GP:TMR83809.1;Name=TMR83809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446862.1;locus_tag=E3V42_06330;product=S-ribosylhomocysteine lyase;protein_id=TMR83809.1;transl_table=11 SOQV01000050.1 Genbank gene 8290 9774 . - . ID=gene-E3V42_06335;Name=E3V42_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06335 SOQV01000050.1 Protein Homology CDS 8290 9774 . - 0 ID=cds-TMR83810.1;Parent=gene-E3V42_06335;Dbxref=NCBI_GP:TMR83810.1;Name=TMR83810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357903.1;locus_tag=E3V42_06335;product=DUF1846 domain-containing protein;protein_id=TMR83810.1;transl_table=11 SOQV01000050.1 Genbank pseudogene 10074 10544 . + . ID=gene-E3V42_06340;Name=E3V42_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06340;pseudo=true SOQV01000050.1 Protein Homology CDS 10074 10544 . + 0 ID=cds-E3V42_06340;Parent=gene-E3V42_06340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004614190.1;locus_tag=E3V42_06340;product=IS110 family transposase;pseudo=true;transl_table=11 SOQV01000050.1 Genbank pseudogene 10639 11409 . + . ID=gene-E3V42_06345;Name=E3V42_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06345;pseudo=true SOQV01000050.1 Protein Homology CDS 10639 11409 . + 0 ID=cds-E3V42_06345;Parent=gene-E3V42_06345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818123.1;locus_tag=E3V42_06345;product=IS110 family transposase;pseudo=true;transl_table=11 SOQV01000050.1 Genbank gene 11646 13253 . + . ID=gene-E3V42_06350;Name=E3V42_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06350 SOQV01000050.1 Protein Homology CDS 11646 13253 . + 0 ID=cds-TMR83811.1;Parent=gene-E3V42_06350;Dbxref=NCBI_GP:TMR83811.1;Name=TMR83811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357904.1;locus_tag=E3V42_06350;product=alpha-glucosidase;protein_id=TMR83811.1;transl_table=11 SOQV01000050.1 Genbank pseudogene 13449 15406 . + . ID=gene-E3V42_06355;Name=E3V42_06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06355;pseudo=true SOQV01000050.1 Protein Homology CDS 13449 15406 . + 0 ID=cds-E3V42_06355;Parent=gene-E3V42_06355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093127.1;locus_tag=E3V42_06355;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQV01000050.1 Genbank gene 15694 16794 . + . ID=gene-E3V42_06360;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=E3V42_06360 SOQV01000050.1 Protein Homology CDS 15694 16794 . + 0 ID=cds-TMR83812.1;Parent=gene-E3V42_06360;Dbxref=NCBI_GP:TMR83812.1;Name=TMR83812.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446859.1;locus_tag=E3V42_06360;product=UDP-galactopyranose mutase;protein_id=TMR83812.1;transl_table=11 SOQV01000050.1 Genbank gene 16879 16998 . + . ID=gene-E3V42_06365;Name=E3V42_06365;end_range=16998,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06365;partial=true SOQV01000050.1 Protein Homology CDS 16879 16998 . + 0 ID=cds-TMR83813.1;Parent=gene-E3V42_06365;Dbxref=NCBI_GP:TMR83813.1;Name=TMR83813.1;end_range=16998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_06365;partial=true;product=IS630 family transposase;protein_id=TMR83813.1;transl_table=11 ##sequence-region SOQV01000051.1 1 19899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000051.1 Genbank region 1 19899 . + . ID=SOQV01000051.1:1..19899;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000051.1 Genbank pseudogene 1 596 . + . ID=gene-E3V42_06370;Name=E3V42_06370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06370;pseudo=true SOQV01000051.1 Protein Homology CDS 1 596 . + 1 ID=cds-E3V42_06370;Parent=gene-E3V42_06370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_06370;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000051.1 Genbank pseudogene 699 806 . + . ID=gene-E3V42_06375;Name=E3V42_06375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06375;pseudo=true SOQV01000051.1 Protein Homology CDS 699 806 . + 0 ID=cds-E3V42_06375;Parent=gene-E3V42_06375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_06375;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000051.1 Genbank gene 843 992 . + . ID=gene-E3V42_06380;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V42_06380 SOQV01000051.1 Protein Homology CDS 843 992 . + 0 ID=cds-TMR83772.1;Parent=gene-E3V42_06380;Dbxref=NCBI_GP:TMR83772.1;Name=TMR83772.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028330.1;locus_tag=E3V42_06380;product=50S ribosomal protein L33;protein_id=TMR83772.1;transl_table=11 SOQV01000051.1 Genbank gene 1032 1265 . + . ID=gene-E3V42_06385;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=E3V42_06385 SOQV01000051.1 Protein Homology CDS 1032 1265 . + 0 ID=cds-TMR83773.1;Parent=gene-E3V42_06385;Dbxref=NCBI_GP:TMR83773.1;Name=TMR83773.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358471.1;locus_tag=E3V42_06385;product=preprotein translocase subunit SecG;protein_id=TMR83773.1;transl_table=11 SOQV01000051.1 Genbank gene 1527 3881 . + . ID=gene-E3V42_06390;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=E3V42_06390 SOQV01000051.1 Protein Homology CDS 1527 3881 . + 0 ID=cds-TMR83774.1;Parent=gene-E3V42_06390;Dbxref=NCBI_GP:TMR83774.1;Name=TMR83774.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358472.1;locus_tag=E3V42_06390;product=ribonuclease R;protein_id=TMR83774.1;transl_table=11 SOQV01000051.1 Genbank gene 3844 4311 . + . ID=gene-E3V42_06395;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=E3V42_06395 SOQV01000051.1 Protein Homology CDS 3844 4311 . + 0 ID=cds-TMR83775.1;Parent=gene-E3V42_06395;Dbxref=NCBI_GP:TMR83775.1;Name=TMR83775.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358473.1;locus_tag=E3V42_06395;product=SsrA-binding protein SmpB;protein_id=TMR83775.1;transl_table=11 SOQV01000051.1 Genbank pseudogene 4327 5186 . + . ID=gene-E3V42_06400;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=pseudogene;locus_tag=E3V42_06400;pseudo=true SOQV01000051.1 Protein Homology CDS 4327 5186 . + 0 ID=cds-E3V42_06400;Parent=gene-E3V42_06400;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446090.1;locus_tag=E3V42_06400;product=SAM-dependent methyltransferase TehB;pseudo=true;transl_table=11 SOQV01000051.1 Genbank gene 5259 6212 . + . ID=gene-E3V42_06405;Name=E3V42_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06405 SOQV01000051.1 Protein Homology CDS 5259 6212 . + 0 ID=cds-TMR83776.1;Parent=gene-E3V42_06405;Dbxref=NCBI_GP:TMR83776.1;Name=TMR83776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358475.1;locus_tag=E3V42_06405;product=competence protein CoiA;protein_id=TMR83776.1;transl_table=11 SOQV01000051.1 Genbank gene 6231 8033 . + . ID=gene-E3V42_06410;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=E3V42_06410 SOQV01000051.1 Protein Homology CDS 6231 8033 . + 0 ID=cds-TMR83777.1;Parent=gene-E3V42_06410;Dbxref=NCBI_GP:TMR83777.1;Name=TMR83777.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358476.1;locus_tag=E3V42_06410;product=oligoendopeptidase F;protein_id=TMR83777.1;transl_table=11 SOQV01000051.1 Genbank gene 8035 8748 . + . ID=gene-E3V42_06415;Name=E3V42_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06415 SOQV01000051.1 Protein Homology CDS 8035 8748 . + 0 ID=cds-TMR83778.1;Parent=gene-E3V42_06415;Dbxref=NCBI_GP:TMR83778.1;Name=TMR83778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446094.1;locus_tag=E3V42_06415;product=O-methyltransferase;protein_id=TMR83778.1;transl_table=11 SOQV01000051.1 Genbank gene 8815 9756 . + . ID=gene-E3V42_06420;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=E3V42_06420 SOQV01000051.1 Protein Homology CDS 8815 9756 . + 0 ID=cds-TMR83779.1;Parent=gene-E3V42_06420;Dbxref=NCBI_GP:TMR83779.1;Name=TMR83779.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358478.1;locus_tag=E3V42_06420;product=peptidylprolyl isomerase PrsA;protein_id=TMR83779.1;transl_table=11 SOQV01000051.1 Genbank pseudogene 10063 10158 . + . ID=gene-E3V42_06425;Name=E3V42_06425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06425;pseudo=true SOQV01000051.1 Protein Homology CDS 10063 10158 . + 0 ID=cds-E3V42_06425;Parent=gene-E3V42_06425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V42_06425;product=transposase;pseudo=true;transl_table=11 SOQV01000051.1 Genbank gene 10516 11136 . - . ID=gene-E3V42_06430;Name=E3V42_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06430 SOQV01000051.1 Protein Homology CDS 10516 11136 . - 0 ID=cds-TMR83780.1;Parent=gene-E3V42_06430;Dbxref=NCBI_GP:TMR83780.1;Name=TMR83780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358481.1;locus_tag=E3V42_06430;product=histidine phosphatase family protein;protein_id=TMR83780.1;transl_table=11 SOQV01000051.1 Genbank gene 11136 11618 . - . ID=gene-E3V42_06435;Name=E3V42_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06435 SOQV01000051.1 Protein Homology CDS 11136 11618 . - 0 ID=cds-TMR83781.1;Parent=gene-E3V42_06435;Dbxref=NCBI_GP:TMR83781.1;Name=TMR83781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358482.1;locus_tag=E3V42_06435;product=aminoacyl-tRNA deacylase;protein_id=TMR83781.1;transl_table=11 SOQV01000051.1 Genbank gene 11618 12460 . - . ID=gene-E3V42_06440;Name=E3V42_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06440 SOQV01000051.1 Protein Homology CDS 11618 12460 . - 0 ID=cds-TMR83782.1;Parent=gene-E3V42_06440;Dbxref=NCBI_GP:TMR83782.1;Name=TMR83782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358483.1;locus_tag=E3V42_06440;product=DUF368 domain-containing protein;protein_id=TMR83782.1;transl_table=11 SOQV01000051.1 Genbank gene 12555 13355 . - . ID=gene-E3V42_06445;Name=E3V42_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06445 SOQV01000051.1 Protein Homology CDS 12555 13355 . - 0 ID=cds-TMR83783.1;Parent=gene-E3V42_06445;Dbxref=NCBI_GP:TMR83783.1;Name=TMR83783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358484.1;locus_tag=E3V42_06445;product=glycosyl hydrolase 25 family protein;protein_id=TMR83783.1;transl_table=11 SOQV01000051.1 Genbank gene 13499 14878 . + . ID=gene-E3V42_06450;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=E3V42_06450 SOQV01000051.1 Protein Homology CDS 13499 14878 . + 0 ID=cds-TMR83784.1;Parent=gene-E3V42_06450;Dbxref=NCBI_GP:TMR83784.1;Name=TMR83784.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446399.1;locus_tag=E3V42_06450;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=TMR83784.1;transl_table=11 SOQV01000051.1 Genbank gene 14888 15433 . + . ID=gene-E3V42_06455;Name=E3V42_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06455 SOQV01000051.1 Protein Homology CDS 14888 15433 . + 0 ID=cds-TMR83785.1;Parent=gene-E3V42_06455;Dbxref=NCBI_GP:TMR83785.1;Name=TMR83785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446398.1;locus_tag=E3V42_06455;product=NUDIX hydrolase;protein_id=TMR83785.1;transl_table=11 SOQV01000051.1 Genbank gene 15445 15759 . + . ID=gene-E3V42_06460;Name=E3V42_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06460 SOQV01000051.1 Protein Homology CDS 15445 15759 . + 0 ID=cds-TMR83786.1;Parent=gene-E3V42_06460;Dbxref=NCBI_GP:TMR83786.1;Name=TMR83786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446397.1;locus_tag=E3V42_06460;product=foldase;protein_id=TMR83786.1;transl_table=11 SOQV01000051.1 Genbank gene 15776 16468 . + . ID=gene-E3V42_06465;Name=E3V42_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06465 SOQV01000051.1 Protein Homology CDS 15776 16468 . + 0 ID=cds-TMR83787.1;Parent=gene-E3V42_06465;Dbxref=NCBI_GP:TMR83787.1;Name=TMR83787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446396.1;locus_tag=E3V42_06465;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=TMR83787.1;transl_table=11 SOQV01000051.1 Genbank gene 16545 17036 . + . ID=gene-E3V42_06470;Name=E3V42_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06470 SOQV01000051.1 Protein Homology CDS 16545 17036 . + 0 ID=cds-TMR83788.1;Parent=gene-E3V42_06470;Dbxref=NCBI_GP:TMR83788.1;Name=TMR83788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358489.1;locus_tag=E3V42_06470;product=DUF536 domain-containing protein;protein_id=TMR83788.1;transl_table=11 SOQV01000051.1 Genbank gene 17121 17324 . + . ID=gene-E3V42_06475;Name=E3V42_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06475 SOQV01000051.1 Protein Homology CDS 17121 17324 . + 0 ID=cds-TMR83789.1;Parent=gene-E3V42_06475;Dbxref=NCBI_GP:TMR83789.1;Name=TMR83789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000693552.1;locus_tag=E3V42_06475;product=hypothetical protein;protein_id=TMR83789.1;transl_table=11 SOQV01000051.1 Genbank gene 17337 17927 . + . ID=gene-E3V42_06480;Name=E3V42_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06480 SOQV01000051.1 Protein Homology CDS 17337 17927 . + 0 ID=cds-TMR83790.1;Parent=gene-E3V42_06480;Dbxref=NCBI_GP:TMR83790.1;Name=TMR83790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446394.1;locus_tag=E3V42_06480;product=3'-5' exonuclease;protein_id=TMR83790.1;transl_table=11 SOQV01000051.1 Genbank gene 17930 19699 . + . ID=gene-E3V42_06485;Name=E3V42_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06485 SOQV01000051.1 Protein Homology CDS 17930 19699 . + 0 ID=cds-TMR83791.1;Parent=gene-E3V42_06485;Dbxref=NCBI_GP:TMR83791.1;Name=TMR83791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358491.1;locus_tag=E3V42_06485;product=glycerophosphodiester phosphodiesterase;protein_id=TMR83791.1;transl_table=11 ##sequence-region SOQV01000052.1 1 18626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000052.1 Genbank region 1 18626 . + . ID=SOQV01000052.1:1..18626;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000052.1 Genbank gene 221 307 . + . ID=gene-E3V42_06490;Name=E3V42_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06490 SOQV01000052.1 Protein Homology CDS 221 307 . + 0 ID=cds-TMR83769.1;Parent=gene-E3V42_06490;Dbxref=NCBI_GP:TMR83769.1;Name=TMR83769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822400.1;locus_tag=E3V42_06490;product=DNA alkylation repair protein;protein_id=TMR83769.1;transl_table=11 SOQV01000052.1 Genbank gene 547 2871 . - . ID=gene-E3V42_06495;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=E3V42_06495 SOQV01000052.1 Protein Homology CDS 547 2871 . - 0 ID=cds-TMR83755.1;Parent=gene-E3V42_06495;Dbxref=NCBI_GP:TMR83755.1;Name=TMR83755.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358009.1;locus_tag=E3V42_06495;product=formate C-acetyltransferase;protein_id=TMR83755.1;transl_table=11 SOQV01000052.1 Genbank gene 3110 4171 . + . ID=gene-E3V42_06500;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=E3V42_06500 SOQV01000052.1 Protein Homology CDS 3110 4171 . + 0 ID=cds-TMR83756.1;Parent=gene-E3V42_06500;Dbxref=NCBI_GP:TMR83756.1;Name=TMR83756.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446916.1;locus_tag=E3V42_06500;product=DNA polymerase IV;protein_id=TMR83756.1;transl_table=11 SOQV01000052.1 Genbank pseudogene 4197 5163 . - . ID=gene-E3V42_06505;Name=E3V42_06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06505;pseudo=true SOQV01000052.1 Protein Homology CDS 4197 5163 . - 0 ID=cds-E3V42_06505;Parent=gene-E3V42_06505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001851140.1;locus_tag=E3V42_06505;product=undecaprenyl-diphosphate phosphatase;pseudo=true;transl_table=11 SOQV01000052.1 Genbank gene 5223 7088 . - . ID=gene-E3V42_06510;Name=E3V42_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06510 SOQV01000052.1 Protein Homology CDS 5223 7088 . - 0 ID=cds-TMR83757.1;Parent=gene-E3V42_06510;Dbxref=NCBI_GP:TMR83757.1;Name=TMR83757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837719.1;locus_tag=E3V42_06510;product=DUF2207 domain-containing protein;protein_id=TMR83757.1;transl_table=11 SOQV01000052.1 Genbank gene 7252 8817 . + . ID=gene-E3V42_06515;Name=E3V42_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06515 SOQV01000052.1 Protein Homology CDS 7252 8817 . + 0 ID=cds-TMR83758.1;Parent=gene-E3V42_06515;Dbxref=NCBI_GP:TMR83758.1;Name=TMR83758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358003.2;locus_tag=E3V42_06515;product=transporter substrate-binding domain-containing protein;protein_id=TMR83758.1;transl_table=11 SOQV01000052.1 Genbank gene 8817 9557 . + . ID=gene-E3V42_06520;Name=E3V42_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06520 SOQV01000052.1 Protein Homology CDS 8817 9557 . + 0 ID=cds-TMR83759.1;Parent=gene-E3V42_06520;Dbxref=NCBI_GP:TMR83759.1;Name=TMR83759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358002.1;locus_tag=E3V42_06520;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR83759.1;transl_table=11 SOQV01000052.1 Genbank gene 9666 9881 . - . ID=gene-E3V42_06525;Name=E3V42_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06525 SOQV01000052.1 Protein Homology CDS 9666 9881 . - 0 ID=cds-TMR83760.1;Parent=gene-E3V42_06525;Dbxref=NCBI_GP:TMR83760.1;Name=TMR83760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446921.1;locus_tag=E3V42_06525;product=hypothetical protein;protein_id=TMR83760.1;transl_table=11 SOQV01000052.1 Genbank gene 10711 11961 . - . ID=gene-E3V42_06530;Name=E3V42_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06530 SOQV01000052.1 Protein Homology CDS 10711 11961 . - 0 ID=cds-TMR83761.1;Parent=gene-E3V42_06530;Dbxref=NCBI_GP:TMR83761.1;Name=TMR83761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446922.1;locus_tag=E3V42_06530;product=threonine dehydratase;protein_id=TMR83761.1;transl_table=11 SOQV01000052.1 Genbank gene 12012 12368 . - . ID=gene-E3V42_06535;Name=E3V42_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06535 SOQV01000052.1 Protein Homology CDS 12012 12368 . - 0 ID=cds-TMR83762.1;Parent=gene-E3V42_06535;Dbxref=NCBI_GP:TMR83762.1;Name=TMR83762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357999.1;locus_tag=E3V42_06535;product=ketol-acid reductoisomerase;protein_id=TMR83762.1;transl_table=11 SOQV01000052.1 Genbank gene 12453 13475 . - . ID=gene-E3V42_06540;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=E3V42_06540 SOQV01000052.1 Protein Homology CDS 12453 13475 . - 0 ID=cds-TMR83763.1;Parent=gene-E3V42_06540;Dbxref=NCBI_GP:TMR83763.1;Name=TMR83763.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010246.1;locus_tag=E3V42_06540;product=ketol-acid reductoisomerase;protein_id=TMR83763.1;transl_table=11 SOQV01000052.1 Genbank gene 13541 14017 . - . ID=gene-E3V42_06545;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=E3V42_06545 SOQV01000052.1 Protein Homology CDS 13541 14017 . - 0 ID=cds-TMR83764.1;Parent=gene-E3V42_06545;Dbxref=NCBI_GP:TMR83764.1;Name=TMR83764.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=E3V42_06545;product=acetolactate synthase small subunit;protein_id=TMR83764.1;transl_table=11 SOQV01000052.1 Genbank gene 14010 15710 . - . ID=gene-E3V42_06550;Name=E3V42_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06550 SOQV01000052.1 Protein Homology CDS 14010 15710 . - 0 ID=cds-TMR83765.1;Parent=gene-E3V42_06550;Dbxref=NCBI_GP:TMR83765.1;Name=TMR83765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446925.1;locus_tag=E3V42_06550;product=acetolactate synthase large subunit;protein_id=TMR83765.1;transl_table=11 SOQV01000052.1 Genbank gene 15916 17583 . - . ID=gene-E3V42_06555;Name=E3V42_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06555 SOQV01000052.1 Protein Homology CDS 15916 17583 . - 0 ID=cds-TMR83766.1;Parent=gene-E3V42_06555;Dbxref=NCBI_GP:TMR83766.1;Name=TMR83766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446926.1;locus_tag=E3V42_06555;product=DAK2 domain-containing protein;protein_id=TMR83766.1;transl_table=11 SOQV01000052.1 Genbank gene 17586 17951 . - . ID=gene-E3V42_06560;Name=E3V42_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06560 SOQV01000052.1 Protein Homology CDS 17586 17951 . - 0 ID=cds-TMR83767.1;Parent=gene-E3V42_06560;Dbxref=NCBI_GP:TMR83767.1;Name=TMR83767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=E3V42_06560;product=Asp23/Gls24 family envelope stress response protein;protein_id=TMR83767.1;transl_table=11 SOQV01000052.1 Genbank gene 18106 18294 . - . ID=gene-E3V42_06565;Name=E3V42_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06565 SOQV01000052.1 Protein Homology CDS 18106 18294 . - 0 ID=cds-TMR83768.1;Parent=gene-E3V42_06565;Dbxref=NCBI_GP:TMR83768.1;Name=TMR83768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=E3V42_06565;product=50S ribosomal protein L28;protein_id=TMR83768.1;transl_table=11 ##sequence-region SOQV01000053.1 1 21522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000053.1 Genbank region 1 21522 . + . ID=SOQV01000053.1:1..21522;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000053.1 Genbank gene 1 1216 . - . ID=gene-E3V42_06570;Name=E3V42_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06570;partial=true;start_range=.,1 SOQV01000053.1 Protein Homology CDS 1 1216 . - 0 ID=cds-TMR83678.1;Parent=gene-E3V42_06570;Dbxref=NCBI_GP:TMR83678.1;Name=TMR83678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=E3V42_06570;partial=true;product=tail fiber domain-containing protein;protein_id=TMR83678.1;start_range=.,1;transl_table=11 SOQV01000053.1 Genbank gene 1221 1571 . - . ID=gene-E3V42_06575;Name=E3V42_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06575 SOQV01000053.1 Protein Homology CDS 1221 1571 . - 0 ID=cds-TMR83679.1;Parent=gene-E3V42_06575;Dbxref=NCBI_GP:TMR83679.1;Name=TMR83679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399159.1;locus_tag=E3V42_06575;product=hypothetical protein;protein_id=TMR83679.1;transl_table=11 SOQV01000053.1 Genbank gene 1580 5314 . - . ID=gene-E3V42_06580;Name=E3V42_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06580 SOQV01000053.1 Protein Homology CDS 1580 5314 . - 0 ID=cds-TMR83680.1;Parent=gene-E3V42_06580;Dbxref=NCBI_GP:TMR83680.1;Name=TMR83680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212166.1;locus_tag=E3V42_06580;product=hypothetical protein;protein_id=TMR83680.1;transl_table=11 SOQV01000053.1 Genbank gene 5301 5651 . - . ID=gene-E3V42_06585;Name=E3V42_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06585 SOQV01000053.1 Protein Homology CDS 5301 5651 . - 0 ID=cds-TMR83681.1;Parent=gene-E3V42_06585;Dbxref=NCBI_GP:TMR83681.1;Name=TMR83681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478007.1;locus_tag=E3V42_06585;product=hypothetical protein;protein_id=TMR83681.1;transl_table=11 SOQV01000053.1 Genbank gene 5690 6070 . - . ID=gene-E3V42_06590;Name=E3V42_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06590 SOQV01000053.1 Protein Homology CDS 5690 6070 . - 0 ID=cds-TMR83682.1;Parent=gene-E3V42_06590;Dbxref=NCBI_GP:TMR83682.1;Name=TMR83682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185634.1;locus_tag=E3V42_06590;product=hypothetical protein;protein_id=TMR83682.1;transl_table=11 SOQV01000053.1 Genbank gene 6075 6488 . - . ID=gene-E3V42_06595;Name=E3V42_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06595 SOQV01000053.1 Protein Homology CDS 6075 6488 . - 0 ID=cds-TMR83683.1;Parent=gene-E3V42_06595;Dbxref=NCBI_GP:TMR83683.1;Name=TMR83683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880678.1;locus_tag=E3V42_06595;product=phage tail protein;protein_id=TMR83683.1;transl_table=11 SOQV01000053.1 Genbank gene 6491 6859 . - . ID=gene-E3V42_06600;Name=E3V42_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06600 SOQV01000053.1 Protein Homology CDS 6491 6859 . - 0 ID=cds-TMR83684.1;Parent=gene-E3V42_06600;Dbxref=NCBI_GP:TMR83684.1;Name=TMR83684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608233.1;locus_tag=E3V42_06600;product=hypothetical protein;protein_id=TMR83684.1;transl_table=11 SOQV01000053.1 Genbank gene 6856 7371 . - . ID=gene-E3V42_06605;Name=E3V42_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06605 SOQV01000053.1 Protein Homology CDS 6856 7371 . - 0 ID=cds-TMR83685.1;Parent=gene-E3V42_06605;Dbxref=NCBI_GP:TMR83685.1;Name=TMR83685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284942.1;locus_tag=E3V42_06605;product=HK97 gp10 family phage protein;protein_id=TMR83685.1;transl_table=11 SOQV01000053.1 Genbank gene 7346 7684 . - . ID=gene-E3V42_06610;Name=E3V42_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06610 SOQV01000053.1 Protein Homology CDS 7346 7684 . - 0 ID=cds-TMR83686.1;Parent=gene-E3V42_06610;Dbxref=NCBI_GP:TMR83686.1;Name=TMR83686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478943.1;locus_tag=E3V42_06610;product=hypothetical protein;protein_id=TMR83686.1;transl_table=11 SOQV01000053.1 Genbank gene 7665 7976 . - . ID=gene-E3V42_06615;Name=E3V42_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06615 SOQV01000053.1 Protein Homology CDS 7665 7976 . - 0 ID=cds-TMR83687.1;Parent=gene-E3V42_06615;Dbxref=NCBI_GP:TMR83687.1;Name=TMR83687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866508.1;locus_tag=E3V42_06615;product=phage head-tail adapter protein;protein_id=TMR83687.1;transl_table=11 SOQV01000053.1 Genbank gene 7978 8166 . - . ID=gene-E3V42_06620;Name=E3V42_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06620 SOQV01000053.1 Protein Homology CDS 7978 8166 . - 0 ID=cds-TMR83688.1;Parent=gene-E3V42_06620;Dbxref=NCBI_GP:TMR83688.1;Name=TMR83688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669348.1;locus_tag=E3V42_06620;product=hypothetical protein;protein_id=TMR83688.1;transl_table=11 SOQV01000053.1 Genbank gene 8156 8338 . - . ID=gene-E3V42_06625;Name=E3V42_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06625 SOQV01000053.1 Protein Homology CDS 8156 8338 . - 0 ID=cds-TMR83689.1;Parent=gene-E3V42_06625;Dbxref=NCBI_GP:TMR83689.1;Name=TMR83689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054935.1;locus_tag=E3V42_06625;product=Rho termination protein;protein_id=TMR83689.1;transl_table=11 SOQV01000053.1 Genbank gene 8350 9192 . - . ID=gene-E3V42_06630;Name=E3V42_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06630 SOQV01000053.1 Protein Homology CDS 8350 9192 . - 0 ID=cds-TMR83690.1;Parent=gene-E3V42_06630;Dbxref=NCBI_GP:TMR83690.1;Name=TMR83690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123892.1;locus_tag=E3V42_06630;product=N4-gp56 family major capsid protein;protein_id=TMR83690.1;transl_table=11 SOQV01000053.1 Genbank gene 9198 9767 . - . ID=gene-E3V42_06635;Name=E3V42_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06635 SOQV01000053.1 Protein Homology CDS 9198 9767 . - 0 ID=cds-TMR83691.1;Parent=gene-E3V42_06635;Dbxref=NCBI_GP:TMR83691.1;Name=TMR83691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288027.1;locus_tag=E3V42_06635;product=DUF4355 domain-containing protein;protein_id=TMR83691.1;transl_table=11 SOQV01000053.1 Genbank gene 9917 10672 . - . ID=gene-E3V42_06640;Name=E3V42_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06640 SOQV01000053.1 Protein Homology CDS 9917 10672 . - 0 ID=cds-TMR83692.1;Parent=gene-E3V42_06640;Dbxref=NCBI_GP:TMR83692.1;Name=TMR83692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_269164.1;locus_tag=E3V42_06640;product=phage repressor protein/antirepressor Ant;protein_id=TMR83692.1;transl_table=11 SOQV01000053.1 Genbank gene 10683 10958 . - . ID=gene-E3V42_06645;Name=E3V42_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06645 SOQV01000053.1 GeneMarkS-2+ CDS 10683 10958 . - 0 ID=cds-TMR83693.1;Parent=gene-E3V42_06645;Dbxref=NCBI_GP:TMR83693.1;Name=TMR83693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_06645;product=hypothetical protein;protein_id=TMR83693.1;transl_table=11 SOQV01000053.1 Genbank gene 11078 11212 . - . ID=gene-E3V42_06650;Name=E3V42_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06650 SOQV01000053.1 Protein Homology CDS 11078 11212 . - 0 ID=cds-TMR83708.1;Parent=gene-E3V42_06650;Dbxref=NCBI_GP:TMR83708.1;Name=TMR83708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009061773.1;locus_tag=E3V42_06650;product=ribbon-helix-helix protein%2C CopG family;protein_id=TMR83708.1;transl_table=11 SOQV01000053.1 Genbank gene 11402 11587 . - . ID=gene-E3V42_06655;Name=E3V42_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06655 SOQV01000053.1 Protein Homology CDS 11402 11587 . - 0 ID=cds-TMR83709.1;Parent=gene-E3V42_06655;Dbxref=NCBI_GP:TMR83709.1;Name=TMR83709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000012950.1;locus_tag=E3V42_06655;product=hypothetical protein;protein_id=TMR83709.1;transl_table=11 SOQV01000053.1 Genbank pseudogene 12087 13094 . - . ID=gene-E3V42_06660;Name=E3V42_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06660;pseudo=true SOQV01000053.1 Protein Homology CDS 12087 13094 . - 0 ID=cds-E3V42_06660;Parent=gene-E3V42_06660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356281.1;locus_tag=E3V42_06660;product=phage head morphogenesis protein;pseudo=true;transl_table=11 SOQV01000053.1 Genbank gene 13057 13509 . - . ID=gene-E3V42_06665;Name=E3V42_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06665 SOQV01000053.1 Protein Homology CDS 13057 13509 . - 0 ID=cds-TMR83694.1;Parent=gene-E3V42_06665;Dbxref=NCBI_GP:TMR83694.1;Name=TMR83694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866506.1;locus_tag=E3V42_06665;product=phage portal protein;protein_id=TMR83694.1;transl_table=11 SOQV01000053.1 Genbank gene 13724 14257 . - . ID=gene-E3V42_06670;Name=E3V42_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06670 SOQV01000053.1 Protein Homology CDS 13724 14257 . - 0 ID=cds-TMR83695.1;Parent=gene-E3V42_06670;Dbxref=NCBI_GP:TMR83695.1;Name=TMR83695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588570.1;locus_tag=E3V42_06670;product=hypothetical protein;protein_id=TMR83695.1;transl_table=11 SOQV01000053.1 Genbank gene 14386 15405 . - . ID=gene-E3V42_06675;Name=E3V42_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06675 SOQV01000053.1 Protein Homology CDS 14386 15405 . - 0 ID=cds-TMR83696.1;Parent=gene-E3V42_06675;Dbxref=NCBI_GP:TMR83696.1;Name=TMR83696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866505.1;locus_tag=E3V42_06675;product=phage portal protein;protein_id=TMR83696.1;transl_table=11 SOQV01000053.1 Genbank gene 15417 16631 . - . ID=gene-E3V42_06680;Name=E3V42_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06680 SOQV01000053.1 Protein Homology CDS 15417 16631 . - 0 ID=cds-TMR83697.1;Parent=gene-E3V42_06680;Dbxref=NCBI_GP:TMR83697.1;Name=TMR83697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182317.1;locus_tag=E3V42_06680;product=PBSX family phage terminase large subunit;protein_id=TMR83697.1;transl_table=11 SOQV01000053.1 Genbank gene 16621 17115 . - . ID=gene-E3V42_06685;Name=E3V42_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06685 SOQV01000053.1 Protein Homology CDS 16621 17115 . - 0 ID=cds-TMR83698.1;Parent=gene-E3V42_06685;Dbxref=NCBI_GP:TMR83698.1;Name=TMR83698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351060.1;locus_tag=E3V42_06685;product=terminase small subunit;protein_id=TMR83698.1;transl_table=11 SOQV01000053.1 Genbank gene 17605 18051 . - . ID=gene-E3V42_06690;Name=E3V42_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06690 SOQV01000053.1 Protein Homology CDS 17605 18051 . - 0 ID=cds-TMR83699.1;Parent=gene-E3V42_06690;Dbxref=NCBI_GP:TMR83699.1;Name=TMR83699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445581.1;locus_tag=E3V42_06690;product=transcriptional regulator;protein_id=TMR83699.1;transl_table=11 SOQV01000053.1 Genbank gene 18181 18396 . + . ID=gene-E3V42_06695;Name=E3V42_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06695 SOQV01000053.1 Protein Homology CDS 18181 18396 . + 0 ID=cds-TMR83700.1;Parent=gene-E3V42_06695;Dbxref=NCBI_GP:TMR83700.1;Name=TMR83700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445580.1;locus_tag=E3V42_06695;product=AbrB family transcriptional regulator;protein_id=TMR83700.1;transl_table=11 SOQV01000053.1 Genbank gene 18380 18733 . + . ID=gene-E3V42_06700;Name=E3V42_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06700 SOQV01000053.1 Protein Homology CDS 18380 18733 . + 0 ID=cds-TMR83701.1;Parent=gene-E3V42_06700;Dbxref=NCBI_GP:TMR83701.1;Name=TMR83701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445579.1;locus_tag=E3V42_06700;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=TMR83701.1;transl_table=11 SOQV01000053.1 Genbank gene 18761 19546 . - . ID=gene-E3V42_06705;Name=E3V42_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06705 SOQV01000053.1 Protein Homology CDS 18761 19546 . - 0 ID=cds-TMR83702.1;Parent=gene-E3V42_06705;Dbxref=NCBI_GP:TMR83702.1;Name=TMR83702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002332469.1;locus_tag=E3V42_06705;product=phage antirepressor;protein_id=TMR83702.1;transl_table=11 SOQV01000053.1 Genbank gene 19552 19785 . - . ID=gene-E3V42_06710;Name=E3V42_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06710 SOQV01000053.1 Protein Homology CDS 19552 19785 . - 0 ID=cds-TMR83703.1;Parent=gene-E3V42_06710;Dbxref=NCBI_GP:TMR83703.1;Name=TMR83703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009512.1;locus_tag=E3V42_06710;product=hypothetical protein;protein_id=TMR83703.1;transl_table=11 SOQV01000053.1 Genbank gene 19778 20011 . - . ID=gene-E3V42_06715;Name=E3V42_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06715 SOQV01000053.1 GeneMarkS-2+ CDS 19778 20011 . - 0 ID=cds-TMR83704.1;Parent=gene-E3V42_06715;Dbxref=NCBI_GP:TMR83704.1;Name=TMR83704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_06715;product=hypothetical protein;protein_id=TMR83704.1;transl_table=11 SOQV01000053.1 Genbank gene 20169 20348 . - . ID=gene-E3V42_06720;Name=E3V42_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06720 SOQV01000053.1 Protein Homology CDS 20169 20348 . - 0 ID=cds-TMR83705.1;Parent=gene-E3V42_06720;Dbxref=NCBI_GP:TMR83705.1;Name=TMR83705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074663.1;locus_tag=E3V42_06720;product=CopG family transcriptional regulator;protein_id=TMR83705.1;transl_table=11 SOQV01000053.1 Genbank gene 20904 21164 . - . ID=gene-E3V42_06725;Name=E3V42_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06725 SOQV01000053.1 Protein Homology CDS 20904 21164 . - 0 ID=cds-TMR83706.1;Parent=gene-E3V42_06725;Dbxref=NCBI_GP:TMR83706.1;Name=TMR83706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=E3V42_06725;product=DUF1372 family protein;protein_id=TMR83706.1;transl_table=11 SOQV01000053.1 Genbank gene 21322 21522 . - . ID=gene-E3V42_06730;Name=E3V42_06730;end_range=21522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06730;partial=true SOQV01000053.1 Protein Homology CDS 21322 21522 . - 0 ID=cds-TMR83707.1;Parent=gene-E3V42_06730;Dbxref=NCBI_GP:TMR83707.1;Name=TMR83707.1;end_range=21522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284828.1;locus_tag=E3V42_06730;partial=true;product=hypothetical protein;protein_id=TMR83707.1;transl_table=11 ##sequence-region SOQV01000054.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000054.1 Genbank region 1 717 . + . ID=SOQV01000054.1:1..717;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000054.1 Genbank gene 1 200 . - . ID=gene-E3V42_06735;Name=E3V42_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06735;partial=true;start_range=.,1 SOQV01000054.1 GeneMarkS-2+ CDS 1 200 . - 0 ID=cds-TMR83676.1;Parent=gene-E3V42_06735;Dbxref=NCBI_GP:TMR83676.1;Name=TMR83676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_06735;partial=true;product=IS630 family transposase;protein_id=TMR83676.1;start_range=.,1;transl_table=11 SOQV01000054.1 Genbank gene 193 690 . - . ID=gene-E3V42_06740;Name=E3V42_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06740 SOQV01000054.1 Protein Homology CDS 193 690 . - 0 ID=cds-TMR83677.1;Parent=gene-E3V42_06740;Dbxref=NCBI_GP:TMR83677.1;Name=TMR83677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13592.4;locus_tag=E3V42_06740;product=hypothetical protein;protein_id=TMR83677.1;transl_table=11 ##sequence-region SOQV01000055.1 1 577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000055.1 Genbank region 1 577 . + . ID=SOQV01000055.1:1..577;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000055.1 Genbank gene 1 577 . + . ID=gene-E3V42_06745;Name=E3V42_06745;end_range=577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06745;partial=true;start_range=.,1 SOQV01000055.1 Protein Homology CDS 1 577 . + 2 ID=cds-TMR83675.1;Parent=gene-E3V42_06745;Dbxref=NCBI_GP:TMR83675.1;Name=TMR83675.1;end_range=577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_06745;partial=true;product=IS30 family transposase;protein_id=TMR83675.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000056.1 1 2790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000056.1 Genbank region 1 2790 . + . ID=SOQV01000056.1:1..2790;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000056.1 Genbank pseudogene 151 788 . + . ID=gene-E3V42_06750;Name=E3V42_06750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06750;pseudo=true SOQV01000056.1 Protein Homology CDS 151 788 . + 0 ID=cds-E3V42_06750;Parent=gene-E3V42_06750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359306.1;locus_tag=E3V42_06750;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 SOQV01000056.1 Genbank gene 785 1720 . + . ID=gene-E3V42_06755;Name=E3V42_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06755 SOQV01000056.1 Protein Homology CDS 785 1720 . + 0 ID=cds-TMR83617.1;Parent=gene-E3V42_06755;Dbxref=NCBI_GP:TMR83617.1;Name=TMR83617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359307.1;locus_tag=E3V42_06755;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=TMR83617.1;transl_table=11 SOQV01000056.1 Genbank gene 1948 2035 . - . ID=gene-E3V42_06760;Name=E3V42_06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06760 SOQV01000056.1 tRNAscan-SE tRNA 1948 2035 . - . ID=rna-E3V42_06760;Parent=gene-E3V42_06760;anticodon=(pos:complement(1999..2001));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06760;product=tRNA-Ser SOQV01000056.1 tRNAscan-SE exon 1948 2035 . - . ID=exon-E3V42_06760-1;Parent=rna-E3V42_06760;anticodon=(pos:complement(1999..2001));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06760;product=tRNA-Ser SOQV01000056.1 Genbank gene 2042 2115 . - . ID=gene-E3V42_06765;Name=E3V42_06765;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06765 SOQV01000056.1 tRNAscan-SE tRNA 2042 2115 . - . ID=rna-E3V42_06765;Parent=gene-E3V42_06765;anticodon=(pos:complement(2079..2081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06765;product=tRNA-Ile SOQV01000056.1 tRNAscan-SE exon 2042 2115 . - . ID=exon-E3V42_06765-1;Parent=rna-E3V42_06765;anticodon=(pos:complement(2079..2081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06765;product=tRNA-Ile SOQV01000056.1 Genbank gene 2151 2221 . - . ID=gene-E3V42_06770;Name=E3V42_06770;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06770 SOQV01000056.1 tRNAscan-SE tRNA 2151 2221 . - . ID=rna-E3V42_06770;Parent=gene-E3V42_06770;anticodon=(pos:complement(2187..2189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06770;product=tRNA-Gly SOQV01000056.1 tRNAscan-SE exon 2151 2221 . - . ID=exon-E3V42_06770-1;Parent=rna-E3V42_06770;anticodon=(pos:complement(2187..2189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06770;product=tRNA-Gly SOQV01000056.1 Genbank gene 2241 2313 . - . ID=gene-E3V42_06775;Name=E3V42_06775;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06775 SOQV01000056.1 tRNAscan-SE tRNA 2241 2313 . - . ID=rna-E3V42_06775;Parent=gene-E3V42_06775;anticodon=(pos:complement(2278..2280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06775;product=tRNA-Phe SOQV01000056.1 tRNAscan-SE exon 2241 2313 . - . ID=exon-E3V42_06775-1;Parent=rna-E3V42_06775;anticodon=(pos:complement(2278..2280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06775;product=tRNA-Phe SOQV01000056.1 Genbank gene 2317 2390 . - . ID=gene-E3V42_06780;Name=E3V42_06780;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06780 SOQV01000056.1 tRNAscan-SE tRNA 2317 2390 . - . ID=rna-E3V42_06780;Parent=gene-E3V42_06780;anticodon=(pos:complement(2354..2356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06780;product=tRNA-Met SOQV01000056.1 tRNAscan-SE exon 2317 2390 . - . ID=exon-E3V42_06780-1;Parent=rna-E3V42_06780;anticodon=(pos:complement(2354..2356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06780;product=tRNA-Met SOQV01000056.1 Genbank gene 2401 2490 . - . ID=gene-E3V42_06785;Name=E3V42_06785;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06785 SOQV01000056.1 tRNAscan-SE tRNA 2401 2490 . - . ID=rna-E3V42_06785;Parent=gene-E3V42_06785;anticodon=(pos:complement(2452..2454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06785;product=tRNA-Ser SOQV01000056.1 tRNAscan-SE exon 2401 2490 . - . ID=exon-E3V42_06785-1;Parent=rna-E3V42_06785;anticodon=(pos:complement(2452..2454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06785;product=tRNA-Ser SOQV01000056.1 Genbank gene 2501 2574 . - . ID=gene-E3V42_06790;Name=E3V42_06790;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06790 SOQV01000056.1 tRNAscan-SE tRNA 2501 2574 . - . ID=rna-E3V42_06790;Parent=gene-E3V42_06790;anticodon=(pos:complement(2538..2540));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06790;product=tRNA-Met SOQV01000056.1 tRNAscan-SE exon 2501 2574 . - . ID=exon-E3V42_06790-1;Parent=rna-E3V42_06790;anticodon=(pos:complement(2538..2540));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06790;product=tRNA-Met SOQV01000056.1 Genbank gene 2588 2661 . - . ID=gene-E3V42_06795;Name=E3V42_06795;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06795 SOQV01000056.1 tRNAscan-SE tRNA 2588 2661 . - . ID=rna-E3V42_06795;Parent=gene-E3V42_06795;anticodon=(pos:complement(2625..2627));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06795;product=tRNA-Met SOQV01000056.1 tRNAscan-SE exon 2588 2661 . - . ID=exon-E3V42_06795-1;Parent=rna-E3V42_06795;anticodon=(pos:complement(2625..2627));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06795;product=tRNA-Met SOQV01000056.1 Genbank gene 2667 2740 . - . ID=gene-E3V42_06800;Name=E3V42_06800;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06800 SOQV01000056.1 tRNAscan-SE tRNA 2667 2740 . - . ID=rna-E3V42_06800;Parent=gene-E3V42_06800;anticodon=(pos:complement(2704..2706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06800;product=tRNA-Pro SOQV01000056.1 tRNAscan-SE exon 2667 2740 . - . ID=exon-E3V42_06800-1;Parent=rna-E3V42_06800;anticodon=(pos:complement(2704..2706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06800;product=tRNA-Pro ##sequence-region SOQV01000057.1 1 677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000057.1 Genbank region 1 677 . + . ID=SOQV01000057.1:1..677;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000057.1 Genbank gene 138 611 . - . ID=gene-E3V42_06805;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=E3V42_06805 SOQV01000057.1 Protein Homology CDS 138 611 . - 0 ID=cds-TMR83616.1;Parent=gene-E3V42_06805;Dbxref=NCBI_GP:TMR83616.1;Name=TMR83616.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V42_06805;product=IS200/IS605 family transposase;protein_id=TMR83616.1;transl_table=11 ##sequence-region SOQV01000058.1 1 38391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000058.1 Genbank region 1 38391 . + . ID=SOQV01000058.1:1..38391;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000058.1 Genbank gene 179 937 . - . ID=gene-E3V42_06810;Name=E3V42_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06810 SOQV01000058.1 Protein Homology CDS 179 937 . - 0 ID=cds-TMR83582.1;Parent=gene-E3V42_06810;Dbxref=NCBI_GP:TMR83582.1;Name=TMR83582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446102.1;locus_tag=E3V42_06810;product=ABC transporter ATP-binding protein;protein_id=TMR83582.1;transl_table=11 SOQV01000058.1 Genbank gene 934 1800 . - . ID=gene-E3V42_06815;Name=E3V42_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06815 SOQV01000058.1 Protein Homology CDS 934 1800 . - 0 ID=cds-TMR83583.1;Parent=gene-E3V42_06815;Dbxref=NCBI_GP:TMR83583.1;Name=TMR83583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446101.1;locus_tag=E3V42_06815;product=ABC transporter permease;protein_id=TMR83583.1;transl_table=11 SOQV01000058.1 Genbank gene 1869 2873 . - . ID=gene-E3V42_06820;Name=E3V42_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06820 SOQV01000058.1 Protein Homology CDS 1869 2873 . - 0 ID=cds-TMR83584.1;Parent=gene-E3V42_06820;Dbxref=NCBI_GP:TMR83584.1;Name=TMR83584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446100.1;locus_tag=E3V42_06820;product=peptide ABC transporter substrate-binding protein;protein_id=TMR83584.1;transl_table=11 SOQV01000058.1 Genbank gene 3423 6119 . - . ID=gene-E3V42_06825;Name=E3V42_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06825 SOQV01000058.1 Protein Homology CDS 3423 6119 . - 0 ID=cds-TMR83585.1;Parent=gene-E3V42_06825;Dbxref=NCBI_GP:TMR83585.1;Name=TMR83585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358568.1;locus_tag=E3V42_06825;product=phosphoenolpyruvate carboxylase;protein_id=TMR83585.1;transl_table=11 SOQV01000058.1 Genbank gene 6144 7367 . - . ID=gene-E3V42_06830;Name=E3V42_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06830 SOQV01000058.1 Protein Homology CDS 6144 7367 . - 0 ID=cds-TMR83586.1;Parent=gene-E3V42_06830;Dbxref=NCBI_GP:TMR83586.1;Name=TMR83586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358567.1;locus_tag=E3V42_06830;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=TMR83586.1;transl_table=11 SOQV01000058.1 Genbank pseudogene 7521 7761 . - . ID=gene-E3V42_06835;Name=E3V42_06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06835;pseudo=true SOQV01000058.1 Protein Homology CDS 7521 7761 . - 0 ID=cds-E3V42_06835;Parent=gene-E3V42_06835;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=E3V42_06835;product=transposase family protein;pseudo=true;transl_table=11 SOQV01000058.1 Genbank gene 7988 9346 . - . ID=gene-E3V42_06840;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=E3V42_06840 SOQV01000058.1 Protein Homology CDS 7988 9346 . - 0 ID=cds-TMR83587.1;Parent=gene-E3V42_06840;Dbxref=NCBI_GP:TMR83587.1;Name=TMR83587.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446231.1;locus_tag=E3V42_06840;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TMR83587.1;transl_table=11 SOQV01000058.1 Genbank gene 9420 10394 . - . ID=gene-E3V42_06845;Name=E3V42_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06845 SOQV01000058.1 Protein Homology CDS 9420 10394 . - 0 ID=cds-TMR83588.1;Parent=gene-E3V42_06845;Dbxref=NCBI_GP:TMR83588.1;Name=TMR83588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446232.1;locus_tag=E3V42_06845;product=DUF1002 domain-containing protein;protein_id=TMR83588.1;transl_table=11 SOQV01000058.1 Genbank gene 10468 11082 . - . ID=gene-E3V42_06850;Name=E3V42_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06850 SOQV01000058.1 Protein Homology CDS 10468 11082 . - 0 ID=cds-TMR83589.1;Parent=gene-E3V42_06850;Dbxref=NCBI_GP:TMR83589.1;Name=TMR83589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446233.1;locus_tag=E3V42_06850;product=lysozyme family protein;protein_id=TMR83589.1;transl_table=11 SOQV01000058.1 Genbank gene 11082 12056 . - . ID=gene-E3V42_06855;Name=E3V42_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06855 SOQV01000058.1 Protein Homology CDS 11082 12056 . - 0 ID=cds-TMR83590.1;Parent=gene-E3V42_06855;Dbxref=NCBI_GP:TMR83590.1;Name=TMR83590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035114.1;locus_tag=E3V42_06855;product=nucleoid-associated protein;protein_id=TMR83590.1;transl_table=11 SOQV01000058.1 Genbank gene 12064 13320 . - . ID=gene-E3V42_06860;Name=E3V42_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06860 SOQV01000058.1 Protein Homology CDS 12064 13320 . - 0 ID=cds-TMR83591.1;Parent=gene-E3V42_06860;Dbxref=NCBI_GP:TMR83591.1;Name=TMR83591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358522.1;locus_tag=E3V42_06860;product=serine hydroxymethyltransferase;protein_id=TMR83591.1;transl_table=11 SOQV01000058.1 Genbank gene 13383 13814 . - . ID=gene-E3V42_06865;Name=E3V42_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06865 SOQV01000058.1 Protein Homology CDS 13383 13814 . - 0 ID=cds-TMR83592.1;Parent=gene-E3V42_06865;Dbxref=NCBI_GP:TMR83592.1;Name=TMR83592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446236.1;locus_tag=E3V42_06865;product=GNAT family N-acetyltransferase;protein_id=TMR83592.1;transl_table=11 SOQV01000058.1 Genbank gene 13816 14445 . - . ID=gene-E3V42_06870;Name=E3V42_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06870 SOQV01000058.1 Protein Homology CDS 13816 14445 . - 0 ID=cds-TMR83593.1;Parent=gene-E3V42_06870;Dbxref=NCBI_GP:TMR83593.1;Name=TMR83593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446237.1;locus_tag=E3V42_06870;product=threonylcarbamoyl-AMP synthase;protein_id=TMR83593.1;transl_table=11 SOQV01000058.1 Genbank gene 14402 15238 . - . ID=gene-E3V42_06875;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=E3V42_06875 SOQV01000058.1 Protein Homology CDS 14402 15238 . - 0 ID=cds-TMR83594.1;Parent=gene-E3V42_06875;Dbxref=NCBI_GP:TMR83594.1;Name=TMR83594.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446238.1;locus_tag=E3V42_06875;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=TMR83594.1;transl_table=11 SOQV01000058.1 Genbank gene 15238 16317 . - . ID=gene-E3V42_06880;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=E3V42_06880 SOQV01000058.1 Protein Homology CDS 15238 16317 . - 0 ID=cds-TMR83595.1;Parent=gene-E3V42_06880;Dbxref=NCBI_GP:TMR83595.1;Name=TMR83595.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358518.1;locus_tag=E3V42_06880;product=peptide chain release factor 1;protein_id=TMR83595.1;transl_table=11 SOQV01000058.1 Genbank gene 16314 16904 . - . ID=gene-E3V42_06885;Name=E3V42_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06885 SOQV01000058.1 Protein Homology CDS 16314 16904 . - 0 ID=cds-TMR83596.1;Parent=gene-E3V42_06885;Dbxref=NCBI_GP:TMR83596.1;Name=TMR83596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068157.1;locus_tag=E3V42_06885;product=thymidine kinase;protein_id=TMR83596.1;transl_table=11 SOQV01000058.1 Genbank gene 17027 17209 . + . ID=gene-E3V42_06890;Name=E3V42_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06890 SOQV01000058.1 Protein Homology CDS 17027 17209 . + 0 ID=cds-TMR83597.1;Parent=gene-E3V42_06890;Dbxref=NCBI_GP:TMR83597.1;Name=TMR83597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358515.1;locus_tag=E3V42_06890;product=4-oxalocrotonate tautomerase;protein_id=TMR83597.1;transl_table=11 SOQV01000058.1 Genbank gene 17347 18720 . + . ID=gene-E3V42_06895;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=E3V42_06895 SOQV01000058.1 Protein Homology CDS 17347 18720 . + 0 ID=cds-TMR83598.1;Parent=gene-E3V42_06895;Dbxref=NCBI_GP:TMR83598.1;Name=TMR83598.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446243.1;locus_tag=E3V42_06895;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TMR83598.1;transl_table=11 SOQV01000058.1 Genbank gene 18766 19701 . - . ID=gene-E3V42_06900;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=E3V42_06900 SOQV01000058.1 Protein Homology CDS 18766 19701 . - 0 ID=cds-TMR83599.1;Parent=gene-E3V42_06900;Dbxref=NCBI_GP:TMR83599.1;Name=TMR83599.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446244.1;locus_tag=E3V42_06900;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TMR83599.1;transl_table=11 SOQV01000058.1 Genbank gene 19757 20833 . - . ID=gene-E3V42_06905;Name=E3V42_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06905 SOQV01000058.1 Protein Homology CDS 19757 20833 . - 0 ID=cds-TMR83600.1;Parent=gene-E3V42_06905;Dbxref=NCBI_GP:TMR83600.1;Name=TMR83600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=E3V42_06905;product=aspartate-semialdehyde dehydrogenase;protein_id=TMR83600.1;transl_table=11 SOQV01000058.1 Genbank gene 21177 21249 . - . ID=gene-E3V42_06910;Name=E3V42_06910;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_06910 SOQV01000058.1 tRNAscan-SE tRNA 21177 21249 . - . ID=rna-E3V42_06910;Parent=gene-E3V42_06910;anticodon=(pos:complement(21214..21216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06910;product=tRNA-Thr SOQV01000058.1 tRNAscan-SE exon 21177 21249 . - . ID=exon-E3V42_06910-1;Parent=rna-E3V42_06910;anticodon=(pos:complement(21214..21216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_06910;product=tRNA-Thr SOQV01000058.1 Genbank gene 21350 21859 . - . ID=gene-E3V42_06915;Name=E3V42_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06915 SOQV01000058.1 Protein Homology CDS 21350 21859 . - 0 ID=cds-TMR83601.1;Parent=gene-E3V42_06915;Dbxref=NCBI_GP:TMR83601.1;Name=TMR83601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446246.1;locus_tag=E3V42_06915;product=queuosine transporter QueT;protein_id=TMR83601.1;transl_table=11 SOQV01000058.1 cmsearch riboswitch 21857 21953 . - . ID=id-SOQV01000058.1:21857..21953;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000058.1 Genbank gene 21982 22413 . + . ID=gene-E3V42_06920;Name=E3V42_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06920 SOQV01000058.1 Protein Homology CDS 21982 22413 . + 0 ID=cds-TMR83602.1;Parent=gene-E3V42_06920;Dbxref=NCBI_GP:TMR83602.1;Name=TMR83602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358510.1;locus_tag=E3V42_06920;product=GtrA family protein;protein_id=TMR83602.1;transl_table=11 SOQV01000058.1 Genbank gene 22495 22872 . + . ID=gene-E3V42_06925;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=E3V42_06925 SOQV01000058.1 Protein Homology CDS 22495 22872 . + 0 ID=cds-TMR83603.1;Parent=gene-E3V42_06925;Dbxref=NCBI_GP:TMR83603.1;Name=TMR83603.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358509.1;locus_tag=E3V42_06925;product=large conductance mechanosensitive channel protein MscL;protein_id=TMR83603.1;transl_table=11 SOQV01000058.1 Genbank gene 22913 24007 . - . ID=gene-E3V42_06930;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=E3V42_06930 SOQV01000058.1 Protein Homology CDS 22913 24007 . - 0 ID=cds-TMR83604.1;Parent=gene-E3V42_06930;Dbxref=NCBI_GP:TMR83604.1;Name=TMR83604.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358508.1;locus_tag=E3V42_06930;product=ferrochelatase;protein_id=TMR83604.1;transl_table=11 SOQV01000058.1 Genbank gene 24161 25384 . + . ID=gene-E3V42_06935;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=E3V42_06935 SOQV01000058.1 Protein Homology CDS 24161 25384 . + 0 ID=cds-TMR83605.1;Parent=gene-E3V42_06935;Dbxref=NCBI_GP:TMR83605.1;Name=TMR83605.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222045.1;locus_tag=E3V42_06935;product=peptidase T;protein_id=TMR83605.1;transl_table=11 SOQV01000058.1 Genbank gene 25462 26049 . - . ID=gene-E3V42_06940;Name=E3V42_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06940 SOQV01000058.1 Protein Homology CDS 25462 26049 . - 0 ID=cds-TMR83606.1;Parent=gene-E3V42_06940;Dbxref=NCBI_GP:TMR83606.1;Name=TMR83606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358506.1;locus_tag=E3V42_06940;product=hypothetical protein;protein_id=TMR83606.1;transl_table=11 SOQV01000058.1 Genbank gene 26014 26235 . + . ID=gene-E3V42_06945;Name=E3V42_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06945 SOQV01000058.1 Protein Homology CDS 26014 26235 . + 0 ID=cds-TMR83607.1;Parent=gene-E3V42_06945;Dbxref=NCBI_GP:TMR83607.1;Name=TMR83607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844654.1;locus_tag=E3V42_06945;product=hypothetical protein;protein_id=TMR83607.1;transl_table=11 SOQV01000058.1 Genbank pseudogene 26312 27940 . - . ID=gene-E3V42_06950;Name=E3V42_06950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06950;pseudo=true SOQV01000058.1 Protein Homology CDS 26312 27940 . - 0 ID=cds-E3V42_06950;Parent=gene-E3V42_06950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672567.1;locus_tag=E3V42_06950;product=pneumococcal-type histidine triad protein;pseudo=true;transl_table=11 SOQV01000058.1 Genbank gene 28260 31349 . - . ID=gene-E3V42_06955;Name=E3V42_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06955 SOQV01000058.1 Protein Homology CDS 28260 31349 . - 0 ID=cds-TMR83608.1;Parent=gene-E3V42_06955;Dbxref=NCBI_GP:TMR83608.1;Name=TMR83608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700358.1;locus_tag=E3V42_06955;product=pneumococcal-type histidine triad protein;protein_id=TMR83608.1;transl_table=11 SOQV01000058.1 Genbank gene 31357 32274 . - . ID=gene-E3V42_06960;Name=adcAII;gbkey=Gene;gene=adcAII;gene_biotype=protein_coding;locus_tag=E3V42_06960 SOQV01000058.1 Protein Homology CDS 31357 32274 . - 0 ID=cds-TMR83609.1;Parent=gene-E3V42_06960;Dbxref=NCBI_GP:TMR83609.1;Name=TMR83609.1;gbkey=CDS;gene=adcAII;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446254.1;locus_tag=E3V42_06960;product=zinc-binding lipoprotein AdcAII;protein_id=TMR83609.1;transl_table=11 SOQV01000058.1 Genbank gene 32417 33808 . - . ID=gene-E3V42_06965;Name=E3V42_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06965 SOQV01000058.1 Protein Homology CDS 32417 33808 . - 0 ID=cds-TMR83610.1;Parent=gene-E3V42_06965;Dbxref=NCBI_GP:TMR83610.1;Name=TMR83610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446255.1;locus_tag=E3V42_06965;product=amino acid permease;protein_id=TMR83610.1;transl_table=11 SOQV01000058.1 Genbank gene 33932 34489 . - . ID=gene-E3V42_06970;Name=E3V42_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06970 SOQV01000058.1 Protein Homology CDS 33932 34489 . - 0 ID=cds-TMR83611.1;Parent=gene-E3V42_06970;Dbxref=NCBI_GP:TMR83611.1;Name=TMR83611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446256.1;locus_tag=E3V42_06970;product=TlpA family protein disulfide reductase;protein_id=TMR83611.1;transl_table=11 SOQV01000058.1 Genbank gene 34501 35208 . - . ID=gene-E3V42_06975;Name=E3V42_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06975 SOQV01000058.1 Protein Homology CDS 34501 35208 . - 0 ID=cds-TMR83612.1;Parent=gene-E3V42_06975;Dbxref=NCBI_GP:TMR83612.1;Name=TMR83612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358497.1;locus_tag=E3V42_06975;product=cytochrome c biogenesis protein CcdA;protein_id=TMR83612.1;transl_table=11 SOQV01000058.1 Genbank gene 35439 35843 . - . ID=gene-E3V42_06980;Name=E3V42_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06980 SOQV01000058.1 Protein Homology CDS 35439 35843 . - 0 ID=cds-TMR83614.1;Parent=gene-E3V42_06980;Dbxref=NCBI_GP:TMR83614.1;Name=TMR83614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358496.1;locus_tag=E3V42_06980;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR83614.1;transl_table=11 SOQV01000058.1 Genbank pseudogene 35883 36080 . - . ID=gene-E3V42_06985;Name=E3V42_06985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_06985;pseudo=true SOQV01000058.1 Protein Homology CDS 35883 36080 . - 0 ID=cds-E3V42_06985;Parent=gene-E3V42_06985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358494.1;locus_tag=E3V42_06985;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000058.1 Genbank gene 37801 38091 . - . ID=gene-E3V42_06990;Name=E3V42_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06990 SOQV01000058.1 Protein Homology CDS 37801 38091 . - 0 ID=cds-TMR83613.1;Parent=gene-E3V42_06990;Dbxref=NCBI_GP:TMR83613.1;Name=TMR83613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284790.1;locus_tag=E3V42_06990;product=YSIRK-type signal peptide-containing protein;protein_id=TMR83613.1;transl_table=11 SOQV01000058.1 Genbank gene 38242 38367 . - . ID=gene-E3V42_06995;Name=E3V42_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_06995 SOQV01000058.1 Protein Homology CDS 38242 38367 . - 0 ID=cds-TMR83615.1;Parent=gene-E3V42_06995;Dbxref=NCBI_GP:TMR83615.1;Name=TMR83615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001867443.1;locus_tag=E3V42_06995;product=transposase domain-containing protein;protein_id=TMR83615.1;transl_table=11 ##sequence-region SOQV01000059.1 1 44615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000059.1 Genbank region 1 44615 . + . ID=SOQV01000059.1:1..44615;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000059.1 Genbank gene 1 456 . + . ID=gene-E3V42_07000;Name=E3V42_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07000;partial=true;start_range=.,1 SOQV01000059.1 Protein Homology CDS 1 456 . + 0 ID=cds-TMR83505.1;Parent=gene-E3V42_07000;Dbxref=NCBI_GP:TMR83505.1;Name=TMR83505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611511.1;locus_tag=E3V42_07000;partial=true;product=IS3 family transposase;protein_id=TMR83505.1;start_range=.,1;transl_table=11 SOQV01000059.1 Genbank gene 708 914 . - . ID=gene-E3V42_07005;Name=E3V42_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07005 SOQV01000059.1 Protein Homology CDS 708 914 . - 0 ID=cds-TMR83506.1;Parent=gene-E3V42_07005;Dbxref=NCBI_GP:TMR83506.1;Name=TMR83506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359505.1;locus_tag=E3V42_07005;product=hypothetical protein;protein_id=TMR83506.1;transl_table=11 SOQV01000059.1 Genbank gene 991 1563 . + . ID=gene-E3V42_07010;Name=E3V42_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07010 SOQV01000059.1 Protein Homology CDS 991 1563 . + 0 ID=cds-TMR83507.1;Parent=gene-E3V42_07010;Dbxref=NCBI_GP:TMR83507.1;Name=TMR83507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359506.1;locus_tag=E3V42_07010;product=hypothetical protein;protein_id=TMR83507.1;transl_table=11 SOQV01000059.1 Genbank gene 2521 2622 . - . ID=gene-E3V42_07015;Name=E3V42_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07015 SOQV01000059.1 Protein Homology CDS 2521 2622 . - 0 ID=cds-TMR83542.1;Parent=gene-E3V42_07015;Dbxref=NCBI_GP:TMR83542.1;Name=TMR83542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_07015;product=DNA alkylation repair protein;protein_id=TMR83542.1;transl_table=11 SOQV01000059.1 Genbank gene 2607 4865 . - . ID=gene-E3V42_07020;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=E3V42_07020 SOQV01000059.1 Protein Homology CDS 2607 4865 . - 0 ID=cds-TMR83508.1;Parent=gene-E3V42_07020;Dbxref=NCBI_GP:TMR83508.1;Name=TMR83508.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359507.1;locus_tag=E3V42_07020;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=TMR83508.1;transl_table=11 SOQV01000059.1 Genbank gene 4891 6408 . - . ID=gene-E3V42_07025;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=E3V42_07025 SOQV01000059.1 Protein Homology CDS 4891 6408 . - 0 ID=cds-TMR83509.1;Parent=gene-E3V42_07025;Dbxref=NCBI_GP:TMR83509.1;Name=TMR83509.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359508.1;locus_tag=E3V42_07025;product=4-alpha-glucanotransferase;protein_id=TMR83509.1;transl_table=11 SOQV01000059.1 Genbank gene 7069 8340 . + . ID=gene-E3V42_07030;Name=E3V42_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07030 SOQV01000059.1 Protein Homology CDS 7069 8340 . + 0 ID=cds-TMR83510.1;Parent=gene-E3V42_07030;Dbxref=NCBI_GP:TMR83510.1;Name=TMR83510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359509.1;locus_tag=E3V42_07030;product=extracellular solute-binding protein;protein_id=TMR83510.1;transl_table=11 SOQV01000059.1 Genbank gene 8437 9744 . + . ID=gene-E3V42_07035;Name=E3V42_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07035 SOQV01000059.1 Protein Homology CDS 8437 9744 . + 0 ID=cds-TMR83511.1;Parent=gene-E3V42_07035;Dbxref=NCBI_GP:TMR83511.1;Name=TMR83511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359510.1;locus_tag=E3V42_07035;product=sugar ABC transporter permease;protein_id=TMR83511.1;transl_table=11 SOQV01000059.1 Genbank gene 9746 10588 . + . ID=gene-E3V42_07040;Name=E3V42_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07040 SOQV01000059.1 Protein Homology CDS 9746 10588 . + 0 ID=cds-TMR83512.1;Parent=gene-E3V42_07040;Dbxref=NCBI_GP:TMR83512.1;Name=TMR83512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445302.1;locus_tag=E3V42_07040;product=sugar ABC transporter permease;protein_id=TMR83512.1;transl_table=11 SOQV01000059.1 Genbank gene 10847 11647 . + . ID=gene-E3V42_07045;Name=E3V42_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07045 SOQV01000059.1 Protein Homology CDS 10847 11647 . + 0 ID=cds-TMR83513.1;Parent=gene-E3V42_07045;Dbxref=NCBI_GP:TMR83513.1;Name=TMR83513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359512.1;locus_tag=E3V42_07045;product=DUF1189 domain-containing protein;protein_id=TMR83513.1;transl_table=11 SOQV01000059.1 Genbank gene 11657 12643 . + . ID=gene-E3V42_07050;Name=E3V42_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07050 SOQV01000059.1 Protein Homology CDS 11657 12643 . + 0 ID=cds-TMR83514.1;Parent=gene-E3V42_07050;Dbxref=NCBI_GP:TMR83514.1;Name=TMR83514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359513.1;locus_tag=E3V42_07050;product=LacI family transcriptional regulator;protein_id=TMR83514.1;transl_table=11 SOQV01000059.1 Genbank gene 12673 13614 . - . ID=gene-E3V42_07055;Name=E3V42_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07055 SOQV01000059.1 Protein Homology CDS 12673 13614 . - 0 ID=cds-TMR83515.1;Parent=gene-E3V42_07055;Dbxref=NCBI_GP:TMR83515.1;Name=TMR83515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359514.1;locus_tag=E3V42_07055;product=YitT family protein;protein_id=TMR83515.1;transl_table=11 SOQV01000059.1 Genbank gene 13592 15355 . - . ID=gene-E3V42_07060;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=E3V42_07060 SOQV01000059.1 Protein Homology CDS 13592 15355 . - 0 ID=cds-TMR83516.1;Parent=gene-E3V42_07060;Dbxref=NCBI_GP:TMR83516.1;Name=TMR83516.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359515.1;locus_tag=E3V42_07060;product=aspartate--tRNA ligase;protein_id=TMR83516.1;transl_table=11 SOQV01000059.1 Genbank gene 15510 15740 . - . ID=gene-E3V42_07065;Name=E3V42_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07065 SOQV01000059.1 Protein Homology CDS 15510 15740 . - 0 ID=cds-TMR83517.1;Parent=gene-E3V42_07065;Dbxref=NCBI_GP:TMR83517.1;Name=TMR83517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359516.1;locus_tag=E3V42_07065;product=hypothetical protein;protein_id=TMR83517.1;transl_table=11 SOQV01000059.1 Genbank gene 15758 16399 . - . ID=gene-E3V42_07070;Name=E3V42_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07070 SOQV01000059.1 Protein Homology CDS 15758 16399 . - 0 ID=cds-TMR83518.1;Parent=gene-E3V42_07070;Dbxref=NCBI_GP:TMR83518.1;Name=TMR83518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359517.1;locus_tag=E3V42_07070;product=CPBP family intramembrane metalloprotease;protein_id=TMR83518.1;transl_table=11 SOQV01000059.1 Genbank gene 16409 17107 . - . ID=gene-E3V42_07075;Name=E3V42_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07075 SOQV01000059.1 Protein Homology CDS 16409 17107 . - 0 ID=cds-TMR83519.1;Parent=gene-E3V42_07075;Dbxref=NCBI_GP:TMR83519.1;Name=TMR83519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445295.1;locus_tag=E3V42_07075;product=ABC transporter permease;protein_id=TMR83519.1;transl_table=11 SOQV01000059.1 Genbank gene 17100 17924 . - . ID=gene-E3V42_07080;Name=E3V42_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07080 SOQV01000059.1 Protein Homology CDS 17100 17924 . - 0 ID=cds-TMR83520.1;Parent=gene-E3V42_07080;Dbxref=NCBI_GP:TMR83520.1;Name=TMR83520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445294.1;locus_tag=E3V42_07080;product=ABC transporter ATP-binding protein;protein_id=TMR83520.1;transl_table=11 SOQV01000059.1 Genbank gene 17935 18684 . - . ID=gene-E3V42_07085;Name=E3V42_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07085 SOQV01000059.1 Protein Homology CDS 17935 18684 . - 0 ID=cds-TMR83521.1;Parent=gene-E3V42_07085;Dbxref=NCBI_GP:TMR83521.1;Name=TMR83521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359518.1;locus_tag=E3V42_07085;product=DUF3169 family protein;protein_id=TMR83521.1;transl_table=11 SOQV01000059.1 Genbank gene 18690 18878 . - . ID=gene-E3V42_07090;Name=E3V42_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07090 SOQV01000059.1 Protein Homology CDS 18690 18878 . - 0 ID=cds-TMR83522.1;Parent=gene-E3V42_07090;Dbxref=NCBI_GP:TMR83522.1;Name=TMR83522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445292.1;locus_tag=E3V42_07090;product=hypothetical protein;protein_id=TMR83522.1;transl_table=11 SOQV01000059.1 Genbank gene 18878 19084 . - . ID=gene-E3V42_07095;Name=E3V42_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07095 SOQV01000059.1 Protein Homology CDS 18878 19084 . - 0 ID=cds-TMR83543.1;Parent=gene-E3V42_07095;Dbxref=NCBI_GP:TMR83543.1;Name=TMR83543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445291.1;locus_tag=E3V42_07095;product=transcriptional regulator;protein_id=TMR83543.1;transl_table=11 SOQV01000059.1 Genbank gene 19094 19558 . - . ID=gene-E3V42_07100;Name=E3V42_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07100 SOQV01000059.1 Protein Homology CDS 19094 19558 . - 0 ID=cds-TMR83523.1;Parent=gene-E3V42_07100;Dbxref=NCBI_GP:TMR83523.1;Name=TMR83523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445290.1;locus_tag=E3V42_07100;product=hypothetical protein;protein_id=TMR83523.1;transl_table=11 SOQV01000059.1 Genbank gene 19558 20838 . - . ID=gene-E3V42_07105;Name=E3V42_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07105 SOQV01000059.1 Protein Homology CDS 19558 20838 . - 0 ID=cds-TMR83524.1;Parent=gene-E3V42_07105;Dbxref=NCBI_GP:TMR83524.1;Name=TMR83524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445289.1;locus_tag=E3V42_07105;product=histidine--tRNA ligase;protein_id=TMR83524.1;transl_table=11 SOQV01000059.1 Genbank gene 20916 22163 . - . ID=gene-E3V42_07110;Name=E3V42_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07110 SOQV01000059.1 Protein Homology CDS 20916 22163 . - 0 ID=cds-TMR83525.1;Parent=gene-E3V42_07110;Dbxref=NCBI_GP:TMR83525.1;Name=TMR83525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445288.1;locus_tag=E3V42_07110;product=transporter;protein_id=TMR83525.1;transl_table=11 SOQV01000059.1 Genbank gene 22363 23214 . - . ID=gene-E3V42_07115;Name=E3V42_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07115 SOQV01000059.1 Protein Homology CDS 22363 23214 . - 0 ID=cds-TMR83526.1;Parent=gene-E3V42_07115;Dbxref=NCBI_GP:TMR83526.1;Name=TMR83526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445287.1;locus_tag=E3V42_07115;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR83526.1;transl_table=11 SOQV01000059.1 Genbank gene 23189 23323 . - . ID=gene-E3V42_07120;Name=E3V42_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07120 SOQV01000059.1 Protein Homology CDS 23189 23323 . - 0 ID=cds-TMR83527.1;Parent=gene-E3V42_07120;Dbxref=NCBI_GP:TMR83527.1;Name=TMR83527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445286.1;locus_tag=E3V42_07120;product=hypothetical protein;protein_id=TMR83527.1;transl_table=11 SOQV01000059.1 Genbank gene 23338 23679 . + . ID=gene-E3V42_07125;Name=E3V42_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07125 SOQV01000059.1 Protein Homology CDS 23338 23679 . + 0 ID=cds-TMR83528.1;Parent=gene-E3V42_07125;Dbxref=NCBI_GP:TMR83528.1;Name=TMR83528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359525.1;locus_tag=E3V42_07125;product=metal-sulfur cluster assembly factor;protein_id=TMR83528.1;transl_table=11 SOQV01000059.1 Genbank gene 23981 25684 . - . ID=gene-E3V42_07130;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=E3V42_07130 SOQV01000059.1 Protein Homology CDS 23981 25684 . - 0 ID=cds-TMR83529.1;Parent=gene-E3V42_07130;Dbxref=NCBI_GP:TMR83529.1;Name=TMR83529.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359526.1;locus_tag=E3V42_07130;product=dihydroxy-acid dehydratase;protein_id=TMR83529.1;transl_table=11 SOQV01000059.1 Genbank gene 25917 26849 . - . ID=gene-E3V42_07135;Name=E3V42_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07135 SOQV01000059.1 Protein Homology CDS 25917 26849 . - 0 ID=cds-TMR83530.1;Parent=gene-E3V42_07135;Dbxref=NCBI_GP:TMR83530.1;Name=TMR83530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445283.1;locus_tag=E3V42_07135;product=transketolase family protein;protein_id=TMR83530.1;transl_table=11 SOQV01000059.1 Genbank gene 26846 27703 . - . ID=gene-E3V42_07140;Name=E3V42_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07140 SOQV01000059.1 Protein Homology CDS 26846 27703 . - 0 ID=cds-TMR83531.1;Parent=gene-E3V42_07140;Dbxref=NCBI_GP:TMR83531.1;Name=TMR83531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445282.1;locus_tag=E3V42_07140;product=transketolase;protein_id=TMR83531.1;transl_table=11 SOQV01000059.1 Genbank gene 27707 29053 . - . ID=gene-E3V42_07145;Name=E3V42_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07145 SOQV01000059.1 Protein Homology CDS 27707 29053 . - 0 ID=cds-TMR83532.1;Parent=gene-E3V42_07145;Dbxref=NCBI_GP:TMR83532.1;Name=TMR83532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359529.1;locus_tag=E3V42_07145;product=PTS ascorbate transporter subunit IIC;protein_id=TMR83532.1;transl_table=11 SOQV01000059.1 Genbank gene 29066 29350 . - . ID=gene-E3V42_07150;Name=E3V42_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07150 SOQV01000059.1 Protein Homology CDS 29066 29350 . - 0 ID=cds-TMR83533.1;Parent=gene-E3V42_07150;Dbxref=NCBI_GP:TMR83533.1;Name=TMR83533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359530.1;locus_tag=E3V42_07150;product=PTS sugar transporter subunit IIB;protein_id=TMR83533.1;transl_table=11 SOQV01000059.1 Genbank gene 29354 31384 . - . ID=gene-E3V42_07155;Name=E3V42_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07155 SOQV01000059.1 Protein Homology CDS 29354 31384 . - 0 ID=cds-TMR83534.1;Parent=gene-E3V42_07155;Dbxref=NCBI_GP:TMR83534.1;Name=TMR83534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359531.1;locus_tag=E3V42_07155;product=BglG family transcription antiterminator;protein_id=TMR83534.1;transl_table=11 SOQV01000059.1 Genbank gene 31575 32582 . + . ID=gene-E3V42_07160;Name=E3V42_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07160 SOQV01000059.1 Protein Homology CDS 31575 32582 . + 0 ID=cds-TMR83535.1;Parent=gene-E3V42_07160;Dbxref=NCBI_GP:TMR83535.1;Name=TMR83535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359532.1;locus_tag=E3V42_07160;product=SPFH domain-containing protein;protein_id=TMR83535.1;transl_table=11 SOQV01000059.1 Genbank gene 32608 32784 . + . ID=gene-E3V42_07165;Name=E3V42_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07165 SOQV01000059.1 Protein Homology CDS 32608 32784 . + 0 ID=cds-TMR83544.1;Parent=gene-E3V42_07165;Dbxref=NCBI_GP:TMR83544.1;Name=TMR83544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359533.1;locus_tag=E3V42_07165;product=PTS ascorbate transporter subunit IIC;protein_id=TMR83544.1;transl_table=11 SOQV01000059.1 Genbank gene 32936 33118 . + . ID=gene-E3V42_07170;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=E3V42_07170 SOQV01000059.1 Protein Homology CDS 32936 33118 . + 0 ID=cds-TMR83536.1;Parent=gene-E3V42_07170;Dbxref=NCBI_GP:TMR83536.1;Name=TMR83536.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=E3V42_07170;product=50S ribosomal protein L32;protein_id=TMR83536.1;transl_table=11 SOQV01000059.1 Genbank gene 33134 33283 . + . ID=gene-E3V42_07175;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V42_07175 SOQV01000059.1 Protein Homology CDS 33134 33283 . + 0 ID=cds-TMR83537.1;Parent=gene-E3V42_07175;Dbxref=NCBI_GP:TMR83537.1;Name=TMR83537.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=E3V42_07175;product=50S ribosomal protein L33;protein_id=TMR83537.1;transl_table=11 SOQV01000059.1 Genbank gene 33806 34927 . + . ID=gene-E3V42_07180;Name=E3V42_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07180 SOQV01000059.1 Protein Homology CDS 33806 34927 . + 0 ID=cds-TMR83538.1;Parent=gene-E3V42_07180;Dbxref=NCBI_GP:TMR83538.1;Name=TMR83538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_689104.1;locus_tag=E3V42_07180;product=Fic family protein;protein_id=TMR83538.1;transl_table=11 SOQV01000059.1 Genbank gene 35273 36874 . - . ID=gene-E3V42_07185;Name=E3V42_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07185 SOQV01000059.1 Protein Homology CDS 35273 36874 . - 0 ID=cds-TMR83539.1;Parent=gene-E3V42_07185;Dbxref=NCBI_GP:TMR83539.1;Name=TMR83539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083785.1;locus_tag=E3V42_07185;product=type I restriction-modification system subunit M;protein_id=TMR83539.1;transl_table=11 SOQV01000059.1 Genbank gene 37232 37903 . - . ID=gene-E3V42_07190;Name=E3V42_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07190 SOQV01000059.1 Protein Homology CDS 37232 37903 . - 0 ID=cds-TMR83545.1;Parent=gene-E3V42_07190;Dbxref=NCBI_GP:TMR83545.1;Name=TMR83545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002389365.1;locus_tag=E3V42_07190;product=restriction endonuclease subunit S;protein_id=TMR83545.1;transl_table=11 SOQV01000059.1 Genbank gene 38452 39519 . - . ID=gene-E3V42_07195;Name=E3V42_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07195 SOQV01000059.1 Protein Homology CDS 38452 39519 . - 0 ID=cds-TMR83540.1;Parent=gene-E3V42_07195;Dbxref=NCBI_GP:TMR83540.1;Name=TMR83540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413037.1;locus_tag=E3V42_07195;product=phage abortive infection protein;protein_id=TMR83540.1;transl_table=11 SOQV01000059.1 Genbank gene 39780 41021 . + . ID=gene-E3V42_07200;Name=E3V42_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07200 SOQV01000059.1 Protein Homology CDS 39780 41021 . + 0 ID=cds-TMR83541.1;Parent=gene-E3V42_07200;Dbxref=NCBI_GP:TMR83541.1;Name=TMR83541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109412.1;locus_tag=E3V42_07200;product=Fic family protein;protein_id=TMR83541.1;transl_table=11 SOQV01000059.1 Genbank pseudogene 41175 44537 . - . ID=gene-E3V42_07205;Name=E3V42_07205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07205;pseudo=true SOQV01000059.1 Protein Homology CDS 41175 44537 . - 0 ID=cds-E3V42_07205;Parent=gene-E3V42_07205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332005.1;locus_tag=E3V42_07205;product=type I restriction endonuclease subunit R;pseudo=true;transl_table=11 ##sequence-region SOQV01000006.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000006.1 Genbank region 1 684 . + . ID=SOQV01000006.1:1..684;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000006.1 Genbank gene 1 220 . + . ID=gene-E3V42_00575;Name=E3V42_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00575;partial=true;start_range=.,1 SOQV01000006.1 Protein Homology CDS 1 220 . + 1 ID=cds-TMR85517.1;Parent=gene-E3V42_00575;Dbxref=NCBI_GP:TMR85517.1;Name=TMR85517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142808.1;locus_tag=E3V42_00575;partial=true;product=IS1634 family transposase;protein_id=TMR85517.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000060.1 1 61130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000060.1 Genbank region 1 61130 . + . ID=SOQV01000060.1:1..61130;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000060.1 Genbank gene 179 889 . + . ID=gene-E3V42_07210;Name=E3V42_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07210 SOQV01000060.1 Protein Homology CDS 179 889 . + 0 ID=cds-TMR83421.1;Parent=gene-E3V42_07210;Dbxref=NCBI_GP:TMR83421.1;Name=TMR83421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006951.1;locus_tag=E3V42_07210;product=DUF4145 domain-containing protein;protein_id=TMR83421.1;transl_table=11 SOQV01000060.1 Genbank gene 1187 1324 . - . ID=gene-E3V42_07215;Name=E3V42_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07215 SOQV01000060.1 Protein Homology CDS 1187 1324 . - 0 ID=cds-TMR83422.1;Parent=gene-E3V42_07215;Dbxref=NCBI_GP:TMR83422.1;Name=TMR83422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446472.1;locus_tag=E3V42_07215;product=hypothetical protein;protein_id=TMR83422.1;transl_table=11 SOQV01000060.1 Genbank gene 1397 1672 . - . ID=gene-E3V42_07220;Name=E3V42_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07220 SOQV01000060.1 Protein Homology CDS 1397 1672 . - 0 ID=cds-TMR83423.1;Parent=gene-E3V42_07220;Dbxref=NCBI_GP:TMR83423.1;Name=TMR83423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973618.1;locus_tag=E3V42_07220;product=hypothetical protein;protein_id=TMR83423.1;transl_table=11 SOQV01000060.1 Genbank gene 1842 2597 . + . ID=gene-E3V42_07225;Name=E3V42_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07225 SOQV01000060.1 Protein Homology CDS 1842 2597 . + 0 ID=cds-TMR83424.1;Parent=gene-E3V42_07225;Dbxref=NCBI_GP:TMR83424.1;Name=TMR83424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377627.1;locus_tag=E3V42_07225;product=helix-turn-helix domain-containing protein;protein_id=TMR83424.1;transl_table=11 SOQV01000060.1 Genbank gene 2598 3362 . + . ID=gene-E3V42_07230;Name=E3V42_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07230 SOQV01000060.1 Protein Homology CDS 2598 3362 . + 0 ID=cds-TMR83425.1;Parent=gene-E3V42_07230;Dbxref=NCBI_GP:TMR83425.1;Name=TMR83425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=E3V42_07230;product=growth inhibitor PemK;protein_id=TMR83425.1;transl_table=11 SOQV01000060.1 Genbank pseudogene 4152 5280 . + . ID=gene-E3V42_07235;Name=E3V42_07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07235;pseudo=true SOQV01000060.1 Protein Homology CDS 4152 5280 . + 0 ID=cds-E3V42_07235;Parent=gene-E3V42_07235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266845.1;locus_tag=E3V42_07235;product=site-specific integrase;pseudo=true;transl_table=11 SOQV01000060.1 Genbank gene 5368 6279 . - . ID=gene-E3V42_07240;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=E3V42_07240 SOQV01000060.1 Protein Homology CDS 5368 6279 . - 0 ID=cds-TMR83426.1;Parent=gene-E3V42_07240;Dbxref=NCBI_GP:TMR83426.1;Name=TMR83426.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359015.1;locus_tag=E3V42_07240;product=DNA-binding protein WhiA;protein_id=TMR83426.1;transl_table=11 SOQV01000060.1 Genbank gene 6276 7253 . - . ID=gene-E3V42_07245;Name=E3V42_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07245 SOQV01000060.1 Protein Homology CDS 6276 7253 . - 0 ID=cds-TMR83427.1;Parent=gene-E3V42_07245;Dbxref=NCBI_GP:TMR83427.1;Name=TMR83427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446657.1;locus_tag=E3V42_07245;product=YvcK family protein;protein_id=TMR83427.1;transl_table=11 SOQV01000060.1 Genbank gene 7250 8140 . - . ID=gene-E3V42_07250;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=E3V42_07250 SOQV01000060.1 Protein Homology CDS 7250 8140 . - 0 ID=cds-TMR83428.1;Parent=gene-E3V42_07250;Dbxref=NCBI_GP:TMR83428.1;Name=TMR83428.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446658.1;locus_tag=E3V42_07250;product=RNase adapter RapZ;protein_id=TMR83428.1;transl_table=11 SOQV01000060.1 Genbank gene 8192 8572 . - . ID=gene-E3V42_07255;Name=E3V42_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07255 SOQV01000060.1 Protein Homology CDS 8192 8572 . - 0 ID=cds-TMR83429.1;Parent=gene-E3V42_07255;Dbxref=NCBI_GP:TMR83429.1;Name=TMR83429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359018.1;locus_tag=E3V42_07255;product=RidA family protein;protein_id=TMR83429.1;transl_table=11 SOQV01000060.1 Genbank gene 8583 9170 . - . ID=gene-E3V42_07260;Name=E3V42_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07260 SOQV01000060.1 Protein Homology CDS 8583 9170 . - 0 ID=cds-TMR83430.1;Parent=gene-E3V42_07260;Dbxref=NCBI_GP:TMR83430.1;Name=TMR83430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035057.1;locus_tag=E3V42_07260;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=TMR83430.1;transl_table=11 SOQV01000060.1 Genbank gene 9179 10411 . - . ID=gene-E3V42_07265;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=E3V42_07265 SOQV01000060.1 Protein Homology CDS 9179 10411 . - 0 ID=cds-TMR83431.1;Parent=gene-E3V42_07265;Dbxref=NCBI_GP:TMR83431.1;Name=TMR83431.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359020.1;locus_tag=E3V42_07265;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TMR83431.1;transl_table=11 SOQV01000060.1 Genbank gene 10443 10613 . - . ID=gene-E3V42_07270;Name=E3V42_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07270 SOQV01000060.1 Protein Homology CDS 10443 10613 . - 0 ID=cds-TMR83432.1;Parent=gene-E3V42_07270;Dbxref=NCBI_GP:TMR83432.1;Name=TMR83432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359021.1;locus_tag=E3V42_07270;product=hypothetical protein;protein_id=TMR83432.1;transl_table=11 SOQV01000060.1 Genbank gene 10613 11119 . - . ID=gene-E3V42_07275;Name=E3V42_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07275 SOQV01000060.1 Protein Homology CDS 10613 11119 . - 0 ID=cds-TMR83433.1;Parent=gene-E3V42_07275;Dbxref=NCBI_GP:TMR83433.1;Name=TMR83433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359022.1;locus_tag=E3V42_07275;product=dihydrofolate reductase;protein_id=TMR83433.1;transl_table=11 SOQV01000060.1 Genbank gene 11249 11767 . - . ID=gene-E3V42_07280;Name=E3V42_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07280 SOQV01000060.1 Protein Homology CDS 11249 11767 . - 0 ID=cds-TMR83434.1;Parent=gene-E3V42_07280;Dbxref=NCBI_GP:TMR83434.1;Name=TMR83434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229877.1;locus_tag=E3V42_07280;product=DNA starvation/stationary phase protection protein;protein_id=TMR83434.1;transl_table=11 SOQV01000060.1 Genbank gene 12418 13908 . - . ID=gene-E3V42_07285;Name=lytC;gbkey=Gene;gene=lytC;gene_biotype=protein_coding;locus_tag=E3V42_07285 SOQV01000060.1 Protein Homology CDS 12418 13908 . - 0 ID=cds-TMR83435.1;Parent=gene-E3V42_07285;Dbxref=NCBI_GP:TMR83435.1;Name=TMR83435.1;gbkey=CDS;gene=lytC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359024.1;locus_tag=E3V42_07285;product=choline binding-anchored murein hydrolase LytC;protein_id=TMR83435.1;transl_table=11 SOQV01000060.1 Genbank gene 13946 14704 . - . ID=gene-E3V42_07290;Name=E3V42_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07290 SOQV01000060.1 Protein Homology CDS 13946 14704 . - 0 ID=cds-TMR83436.1;Parent=gene-E3V42_07290;Dbxref=NCBI_GP:TMR83436.1;Name=TMR83436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446666.1;locus_tag=E3V42_07290;product=triose-phosphate isomerase;protein_id=TMR83436.1;transl_table=11 SOQV01000060.1 Genbank gene 14802 15479 . - . ID=gene-E3V42_07295;Name=E3V42_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07295 SOQV01000060.1 Protein Homology CDS 14802 15479 . - 0 ID=cds-TMR83437.1;Parent=gene-E3V42_07295;Dbxref=NCBI_GP:TMR83437.1;Name=TMR83437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359026.1;locus_tag=E3V42_07295;product=DnaD domain protein;protein_id=TMR83437.1;transl_table=11 SOQV01000060.1 Genbank gene 15488 16432 . - . ID=gene-E3V42_07300;Name=E3V42_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07300 SOQV01000060.1 Protein Homology CDS 15488 16432 . - 0 ID=cds-TMR83438.1;Parent=gene-E3V42_07300;Dbxref=NCBI_GP:TMR83438.1;Name=TMR83438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446668.1;locus_tag=E3V42_07300;product=homoserine O-succinyltransferase;protein_id=TMR83438.1;transl_table=11 SOQV01000060.1 Genbank gene 16416 16601 . - . ID=gene-E3V42_07305;Name=E3V42_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07305 SOQV01000060.1 Protein Homology CDS 16416 16601 . - 0 ID=cds-TMR83439.1;Parent=gene-E3V42_07305;Dbxref=NCBI_GP:TMR83439.1;Name=TMR83439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=E3V42_07305;product=hypothetical protein;protein_id=TMR83439.1;transl_table=11 SOQV01000060.1 Genbank gene 17030 17542 . - . ID=gene-E3V42_07310;Name=E3V42_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07310 SOQV01000060.1 Protein Homology CDS 17030 17542 . - 0 ID=cds-TMR83440.1;Parent=gene-E3V42_07310;Dbxref=NCBI_GP:TMR83440.1;Name=TMR83440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=E3V42_07310;product=adenine phosphoribosyltransferase;protein_id=TMR83440.1;transl_table=11 SOQV01000060.1 Genbank gene 17814 18944 . - . ID=gene-E3V42_07315;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=E3V42_07315 SOQV01000060.1 Protein Homology CDS 17814 18944 . - 0 ID=cds-TMR83441.1;Parent=gene-E3V42_07315;Dbxref=NCBI_GP:TMR83441.1;Name=TMR83441.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359030.1;locus_tag=E3V42_07315;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=TMR83441.1;transl_table=11 SOQV01000060.1 Genbank gene 19225 19310 . - . ID=gene-E3V42_07320;Name=E3V42_07320;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_07320 SOQV01000060.1 tRNAscan-SE tRNA 19225 19310 . - . ID=rna-E3V42_07320;Parent=gene-E3V42_07320;anticodon=(pos:complement(19274..19276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_07320;product=tRNA-Leu SOQV01000060.1 tRNAscan-SE exon 19225 19310 . - . ID=exon-E3V42_07320-1;Parent=rna-E3V42_07320;anticodon=(pos:complement(19274..19276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_07320;product=tRNA-Leu SOQV01000060.1 Genbank gene 19391 19966 . - . ID=gene-E3V42_07325;Name=E3V42_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07325 SOQV01000060.1 Protein Homology CDS 19391 19966 . - 0 ID=cds-TMR83442.1;Parent=gene-E3V42_07325;Dbxref=NCBI_GP:TMR83442.1;Name=TMR83442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359031.1;locus_tag=E3V42_07325;product=cysteine hydrolase;protein_id=TMR83442.1;transl_table=11 SOQV01000060.1 Genbank gene 19966 20754 . - . ID=gene-E3V42_07330;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=E3V42_07330 SOQV01000060.1 Protein Homology CDS 19966 20754 . - 0 ID=cds-TMR83443.1;Parent=gene-E3V42_07330;Dbxref=NCBI_GP:TMR83443.1;Name=TMR83443.1;gbkey=CDS;gene=codY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359032.1;locus_tag=E3V42_07330;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=TMR83443.1;transl_table=11 SOQV01000060.1 Genbank gene 20947 21057 . + . ID=gene-E3V42_07335;Name=E3V42_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07335 SOQV01000060.1 Protein Homology CDS 20947 21057 . + 0 ID=cds-TMR83475.1;Parent=gene-E3V42_07335;Dbxref=NCBI_GP:TMR83475.1;Name=TMR83475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845633.1;locus_tag=E3V42_07335;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=TMR83475.1;transl_table=11 SOQV01000060.1 Genbank gene 21032 22579 . - . ID=gene-E3V42_07340;Name=E3V42_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07340 SOQV01000060.1 Protein Homology CDS 21032 22579 . - 0 ID=cds-TMR83444.1;Parent=gene-E3V42_07340;Dbxref=NCBI_GP:TMR83444.1;Name=TMR83444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445802.1;locus_tag=E3V42_07340;product=DEAD/DEAH box helicase;protein_id=TMR83444.1;transl_table=11 SOQV01000060.1 Genbank gene 22792 24003 . - . ID=gene-E3V42_07345;Name=E3V42_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07345 SOQV01000060.1 Protein Homology CDS 22792 24003 . - 0 ID=cds-TMR83445.1;Parent=gene-E3V42_07345;Dbxref=NCBI_GP:TMR83445.1;Name=TMR83445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359034.1;locus_tag=E3V42_07345;product=MFS transporter;protein_id=TMR83445.1;transl_table=11 SOQV01000060.1 Genbank gene 24197 25513 . + . ID=gene-E3V42_07350;Name=E3V42_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07350 SOQV01000060.1 Protein Homology CDS 24197 25513 . + 0 ID=cds-TMR83446.1;Parent=gene-E3V42_07350;Dbxref=NCBI_GP:TMR83446.1;Name=TMR83446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445799.1;locus_tag=E3V42_07350;product=FAD-containing oxidoreductase;protein_id=TMR83446.1;transl_table=11 SOQV01000060.1 Genbank pseudogene 25567 25644 . + . ID=gene-E3V42_07355;Name=E3V42_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07355;pseudo=true SOQV01000060.1 Protein Homology CDS 25567 25644 . + 0 ID=cds-E3V42_07355;Parent=gene-E3V42_07355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_07355;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000060.1 Genbank gene 25718 27061 . + . ID=gene-E3V42_07360;Name=E3V42_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07360 SOQV01000060.1 Protein Homology CDS 25718 27061 . + 0 ID=cds-TMR83447.1;Parent=gene-E3V42_07360;Dbxref=NCBI_GP:TMR83447.1;Name=TMR83447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359036.1;locus_tag=E3V42_07360;product=Mur ligase family protein;protein_id=TMR83447.1;transl_table=11 SOQV01000060.1 Genbank gene 27061 27843 . + . ID=gene-E3V42_07365;Name=E3V42_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07365 SOQV01000060.1 Protein Homology CDS 27061 27843 . + 0 ID=cds-TMR83448.1;Parent=gene-E3V42_07365;Dbxref=NCBI_GP:TMR83448.1;Name=TMR83448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359037.1;locus_tag=E3V42_07365;product=glutamine amidotransferase;protein_id=TMR83448.1;transl_table=11 SOQV01000060.1 Genbank gene 27969 29051 . + . ID=gene-E3V42_07370;Name=E3V42_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07370 SOQV01000060.1 Protein Homology CDS 27969 29051 . + 0 ID=cds-TMR83449.1;Parent=gene-E3V42_07370;Dbxref=NCBI_GP:TMR83449.1;Name=TMR83449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359038.1;locus_tag=E3V42_07370;product=aminopeptidase P family protein;protein_id=TMR83449.1;transl_table=11 SOQV01000060.1 Genbank gene 29070 30338 . - . ID=gene-E3V42_07375;Name=E3V42_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07375 SOQV01000060.1 Protein Homology CDS 29070 30338 . - 0 ID=cds-TMR83450.1;Parent=gene-E3V42_07375;Dbxref=NCBI_GP:TMR83450.1;Name=TMR83450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961371.1;locus_tag=E3V42_07375;product=GHKL domain-containing protein;protein_id=TMR83450.1;transl_table=11 SOQV01000060.1 Genbank gene 30338 31045 . - . ID=gene-E3V42_07380;Name=E3V42_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07380 SOQV01000060.1 Protein Homology CDS 30338 31045 . - 0 ID=cds-TMR83451.1;Parent=gene-E3V42_07380;Dbxref=NCBI_GP:TMR83451.1;Name=TMR83451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950056.1;locus_tag=E3V42_07380;product=response regulator transcription factor;protein_id=TMR83451.1;transl_table=11 SOQV01000060.1 Genbank gene 31486 32619 . + . ID=gene-E3V42_07385;Name=E3V42_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07385 SOQV01000060.1 Protein Homology CDS 31486 32619 . + 0 ID=cds-TMR83452.1;Parent=gene-E3V42_07385;Dbxref=NCBI_GP:TMR83452.1;Name=TMR83452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014727367.1;locus_tag=E3V42_07385;product=ThiF family adenylyltransferase;protein_id=TMR83452.1;transl_table=11 SOQV01000060.1 Genbank gene 32616 33527 . + . ID=gene-E3V42_07390;Name=E3V42_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07390 SOQV01000060.1 Protein Homology CDS 32616 33527 . + 0 ID=cds-TMR83453.1;Parent=gene-E3V42_07390;Dbxref=NCBI_GP:TMR83453.1;Name=TMR83453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197224.1;locus_tag=E3V42_07390;product=ABC transporter ATP-binding protein;protein_id=TMR83453.1;transl_table=11 SOQV01000060.1 Genbank gene 33529 34251 . + . ID=gene-E3V42_07395;Name=E3V42_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07395 SOQV01000060.1 Protein Homology CDS 33529 34251 . + 0 ID=cds-TMR83454.1;Parent=gene-E3V42_07395;Dbxref=NCBI_GP:TMR83454.1;Name=TMR83454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017479.1;locus_tag=E3V42_07395;product=ABC transporter permease;protein_id=TMR83454.1;transl_table=11 SOQV01000060.1 Genbank gene 34300 34773 . + . ID=gene-E3V42_07400;Name=E3V42_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07400 SOQV01000060.1 Protein Homology CDS 34300 34773 . + 0 ID=cds-TMR83455.1;Parent=gene-E3V42_07400;Dbxref=NCBI_GP:TMR83455.1;Name=TMR83455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155488.1;locus_tag=E3V42_07400;product=GNAT family N-acetyltransferase;protein_id=TMR83455.1;transl_table=11 SOQV01000060.1 Genbank gene 34920 35381 . - . ID=gene-E3V42_07405;Name=E3V42_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07405 SOQV01000060.1 Protein Homology CDS 34920 35381 . - 0 ID=cds-TMR83456.1;Parent=gene-E3V42_07405;Dbxref=NCBI_GP:TMR83456.1;Name=TMR83456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445795.1;locus_tag=E3V42_07405;product=ECF transporter S component;protein_id=TMR83456.1;transl_table=11 SOQV01000060.1 Genbank gene 35359 36132 . - . ID=gene-E3V42_07410;Name=E3V42_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07410 SOQV01000060.1 Protein Homology CDS 35359 36132 . - 0 ID=cds-TMR83457.1;Parent=gene-E3V42_07410;Dbxref=NCBI_GP:TMR83457.1;Name=TMR83457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359043.1;locus_tag=E3V42_07410;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TMR83457.1;transl_table=11 SOQV01000060.1 Genbank gene 36122 36871 . - . ID=gene-E3V42_07415;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=E3V42_07415 SOQV01000060.1 Protein Homology CDS 36122 36871 . - 0 ID=cds-TMR83458.1;Parent=gene-E3V42_07415;Dbxref=NCBI_GP:TMR83458.1;Name=TMR83458.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359044.1;locus_tag=E3V42_07415;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=TMR83458.1;transl_table=11 SOQV01000060.1 Genbank pseudogene 37051 37218 . + . ID=gene-E3V42_07420;Name=E3V42_07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07420;pseudo=true SOQV01000060.1 Protein Homology CDS 37051 37218 . + 0 ID=cds-E3V42_07420;Parent=gene-E3V42_07420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809593.1;locus_tag=E3V42_07420;product=cytidylate kinase;pseudo=true;transl_table=11 SOQV01000060.1 Genbank gene 37190 38341 . - . ID=gene-E3V42_07425;Name=E3V42_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07425 SOQV01000060.1 Protein Homology CDS 37190 38341 . - 0 ID=cds-TMR83459.1;Parent=gene-E3V42_07425;Dbxref=NCBI_GP:TMR83459.1;Name=TMR83459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359046.1;locus_tag=E3V42_07425;product=MFS transporter;protein_id=TMR83459.1;transl_table=11 SOQV01000060.1 Genbank gene 38664 39293 . - . ID=gene-E3V42_07430;Name=E3V42_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07430 SOQV01000060.1 Protein Homology CDS 38664 39293 . - 0 ID=cds-TMR83460.1;Parent=gene-E3V42_07430;Dbxref=NCBI_GP:TMR83460.1;Name=TMR83460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033949.1;locus_tag=E3V42_07430;product=hypothetical protein;protein_id=TMR83460.1;transl_table=11 SOQV01000060.1 Genbank gene 39296 39634 . - . ID=gene-E3V42_07435;Name=E3V42_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07435 SOQV01000060.1 Protein Homology CDS 39296 39634 . - 0 ID=cds-TMR83461.1;Parent=gene-E3V42_07435;Dbxref=NCBI_GP:TMR83461.1;Name=TMR83461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359048.1;locus_tag=E3V42_07435;product=alkylphosphonate utilization protein;protein_id=TMR83461.1;transl_table=11 SOQV01000060.1 Genbank gene 39765 40436 . - . ID=gene-E3V42_07440;Name=E3V42_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07440 SOQV01000060.1 Protein Homology CDS 39765 40436 . - 0 ID=cds-TMR83462.1;Parent=gene-E3V42_07440;Dbxref=NCBI_GP:TMR83462.1;Name=TMR83462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359049.1;locus_tag=E3V42_07440;product=(d)CMP kinase;protein_id=TMR83462.1;transl_table=11 SOQV01000060.1 Genbank gene 40445 40921 . - . ID=gene-E3V42_07445;Name=E3V42_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07445 SOQV01000060.1 Protein Homology CDS 40445 40921 . - 0 ID=cds-TMR83463.1;Parent=gene-E3V42_07445;Dbxref=NCBI_GP:TMR83463.1;Name=TMR83463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359050.1;locus_tag=E3V42_07445;product=LysM domain-containing protein;protein_id=TMR83463.1;transl_table=11 SOQV01000060.1 Genbank gene 40901 41179 . + . ID=gene-E3V42_07450;Name=E3V42_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07450 SOQV01000060.1 Protein Homology CDS 40901 41179 . + 0 ID=cds-TMR83464.1;Parent=gene-E3V42_07450;Dbxref=NCBI_GP:TMR83464.1;Name=TMR83464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359051.1;locus_tag=E3V42_07450;product=ferredoxin;protein_id=TMR83464.1;transl_table=11 SOQV01000060.1 Genbank gene 41369 42013 . - . ID=gene-E3V42_07455;Name=E3V42_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07455 SOQV01000060.1 Protein Homology CDS 41369 42013 . - 0 ID=cds-TMR83465.1;Parent=gene-E3V42_07455;Dbxref=NCBI_GP:TMR83465.1;Name=TMR83465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949237.1;locus_tag=E3V42_07455;product=hypothetical protein;protein_id=TMR83465.1;transl_table=11 SOQV01000060.1 Genbank gene 42188 43123 . - . ID=gene-E3V42_07460;Name=E3V42_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07460 SOQV01000060.1 Protein Homology CDS 42188 43123 . - 0 ID=cds-TMR83466.1;Parent=gene-E3V42_07460;Dbxref=NCBI_GP:TMR83466.1;Name=TMR83466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445786.1;locus_tag=E3V42_07460;product=glycosyltransferase;protein_id=TMR83466.1;transl_table=11 SOQV01000060.1 Genbank gene 43125 44144 . - . ID=gene-E3V42_07465;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=E3V42_07465 SOQV01000060.1 Protein Homology CDS 43125 44144 . - 0 ID=cds-TMR83467.1;Parent=gene-E3V42_07465;Dbxref=NCBI_GP:TMR83467.1;Name=TMR83467.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445785.1;locus_tag=E3V42_07465;product=UDP-glucose 4-epimerase GalE;protein_id=TMR83467.1;transl_table=11 SOQV01000060.1 Genbank gene 44123 44572 . - . ID=gene-E3V42_07470;Name=E3V42_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07470 SOQV01000060.1 Protein Homology CDS 44123 44572 . - 0 ID=cds-TMR83468.1;Parent=gene-E3V42_07470;Dbxref=NCBI_GP:TMR83468.1;Name=TMR83468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1%2CRefSeq:WP_009014301.1;locus_tag=E3V42_07470;product=hypothetical protein;protein_id=TMR83468.1;transl_table=11 SOQV01000060.1 Genbank gene 44579 45691 . - . ID=gene-E3V42_07475;Name=E3V42_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07475 SOQV01000060.1 Protein Homology CDS 44579 45691 . - 0 ID=cds-TMR83469.1;Parent=gene-E3V42_07475;Dbxref=NCBI_GP:TMR83469.1;Name=TMR83469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359054.1;locus_tag=E3V42_07475;product=FAD-binding oxidoreductase;protein_id=TMR83469.1;transl_table=11 SOQV01000060.1 Genbank gene 45918 46532 . - . ID=gene-E3V42_07480;Name=E3V42_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07480 SOQV01000060.1 Protein Homology CDS 45918 46532 . - 0 ID=cds-TMR83470.1;Parent=gene-E3V42_07480;Dbxref=NCBI_GP:TMR83470.1;Name=TMR83470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285080.1;locus_tag=E3V42_07480;product=Abi family protein;protein_id=TMR83470.1;transl_table=11 SOQV01000060.1 Genbank gene 47488 54114 . - . ID=gene-E3V42_07485;Name=E3V42_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07485 SOQV01000060.1 Protein Homology CDS 47488 54114 . - 0 ID=cds-TMR83471.1;Parent=gene-E3V42_07485;Dbxref=NCBI_GP:TMR83471.1;Name=TMR83471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=E3V42_07485;product=YSIRK-type signal peptide-containing protein;protein_id=TMR83471.1;transl_table=11 SOQV01000060.1 Genbank gene 54530 55327 . - . ID=gene-E3V42_07490;Name=E3V42_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07490 SOQV01000060.1 Protein Homology CDS 54530 55327 . - 0 ID=cds-TMR83472.1;Parent=gene-E3V42_07490;Dbxref=NCBI_GP:TMR83472.1;Name=TMR83472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359055.1;locus_tag=E3V42_07490;product=Nif3-like dinuclear metal center hexameric protein;protein_id=TMR83472.1;transl_table=11 SOQV01000060.1 Genbank gene 55314 55991 . - . ID=gene-E3V42_07495;Name=E3V42_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07495 SOQV01000060.1 Protein Homology CDS 55314 55991 . - 0 ID=cds-TMR83473.1;Parent=gene-E3V42_07495;Dbxref=NCBI_GP:TMR83473.1;Name=TMR83473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445781.1;locus_tag=E3V42_07495;product=tRNA (adenine-N(1))-methyltransferase;protein_id=TMR83473.1;transl_table=11 SOQV01000060.1 Genbank pseudogene 56340 57578 . + . ID=gene-E3V42_07500;Name=E3V42_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07500;pseudo=true SOQV01000060.1 Protein Homology CDS 56340 57578 . + 0 ID=cds-E3V42_07500;Parent=gene-E3V42_07500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397624.1;locus_tag=E3V42_07500;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000060.1 Genbank gene 57791 60913 . + . ID=gene-E3V42_07505;Name=E3V42_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07505 SOQV01000060.1 Protein Homology CDS 57791 60913 . + 0 ID=cds-TMR83474.1;Parent=gene-E3V42_07505;Dbxref=NCBI_GP:TMR83474.1;Name=TMR83474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828348.1;locus_tag=E3V42_07505;product=helicase;protein_id=TMR83474.1;transl_table=11 ##sequence-region SOQV01000061.1 1 49908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000061.1 Genbank region 1 49908 . + . ID=SOQV01000061.1:1..49908;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000061.1 Genbank gene 577 7140 . - . ID=gene-E3V42_07510;Name=E3V42_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07510 SOQV01000061.1 Protein Homology CDS 577 7140 . - 0 ID=cds-TMR83380.1;Parent=gene-E3V42_07510;Dbxref=NCBI_GP:TMR83380.1;Name=TMR83380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358155.1;locus_tag=E3V42_07510;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR83380.1;transl_table=11 SOQV01000061.1 Genbank pseudogene 7465 7653 . + . ID=gene-E3V42_07515;Name=E3V42_07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07515;pseudo=true SOQV01000061.1 Protein Homology CDS 7465 7653 . + 0 ID=cds-E3V42_07515;Parent=gene-E3V42_07515;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837104.1;locus_tag=E3V42_07515;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000061.1 Genbank gene 7718 9064 . - . ID=gene-E3V42_07520;Name=E3V42_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07520 SOQV01000061.1 Protein Homology CDS 7718 9064 . - 0 ID=cds-TMR83381.1;Parent=gene-E3V42_07520;Dbxref=NCBI_GP:TMR83381.1;Name=TMR83381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=E3V42_07520;product=IS1380 family transposase;protein_id=TMR83381.1;transl_table=11 SOQV01000061.1 Genbank gene 9435 10220 . - . ID=gene-E3V42_07525;Name=E3V42_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07525 SOQV01000061.1 Protein Homology CDS 9435 10220 . - 0 ID=cds-TMR83382.1;Parent=gene-E3V42_07525;Dbxref=NCBI_GP:TMR83382.1;Name=TMR83382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010202.1;locus_tag=E3V42_07525;product=multidrug ABC transporter permease;protein_id=TMR83382.1;transl_table=11 SOQV01000061.1 Genbank gene 10222 11040 . - . ID=gene-E3V42_07530;Name=E3V42_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07530 SOQV01000061.1 Protein Homology CDS 10222 11040 . - 0 ID=cds-TMR83383.1;Parent=gene-E3V42_07530;Dbxref=NCBI_GP:TMR83383.1;Name=TMR83383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445818.1;locus_tag=E3V42_07530;product=antibiotic ABC transporter permease;protein_id=TMR83383.1;transl_table=11 SOQV01000061.1 Genbank gene 11042 12034 . - . ID=gene-E3V42_07535;Name=E3V42_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07535 SOQV01000061.1 Protein Homology CDS 11042 12034 . - 0 ID=cds-TMR83384.1;Parent=gene-E3V42_07535;Dbxref=NCBI_GP:TMR83384.1;Name=TMR83384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371202.1;locus_tag=E3V42_07535;product=ATP-binding cassette domain-containing protein;protein_id=TMR83384.1;transl_table=11 SOQV01000061.1 Genbank gene 12435 12680 . - . ID=gene-E3V42_07540;Name=E3V42_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07540 SOQV01000061.1 Protein Homology CDS 12435 12680 . - 0 ID=cds-TMR83419.1;Parent=gene-E3V42_07540;Dbxref=NCBI_GP:TMR83419.1;Name=TMR83419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284765.1;locus_tag=E3V42_07540;product=hypothetical protein;protein_id=TMR83419.1;transl_table=11 SOQV01000061.1 Genbank pseudogene 13079 13440 . - . ID=gene-E3V42_07545;Name=E3V42_07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07545;pseudo=true SOQV01000061.1 Protein Homology CDS 13079 13440 . - 0 ID=cds-E3V42_07545;Parent=gene-E3V42_07545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895063.1;locus_tag=E3V42_07545;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000061.1 Genbank pseudogene 13448 13528 . + . ID=gene-E3V42_07550;Name=E3V42_07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07550;pseudo=true SOQV01000061.1 Protein Homology CDS 13448 13528 . + 0 ID=cds-E3V42_07550;Parent=gene-E3V42_07550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820552.1;locus_tag=E3V42_07550;product=UDP-galactopuranose mutase;pseudo=true;transl_table=11 SOQV01000061.1 Genbank gene 13702 14391 . - . ID=gene-E3V42_07555;Name=E3V42_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07555 SOQV01000061.1 Protein Homology CDS 13702 14391 . - 0 ID=cds-TMR83385.1;Parent=gene-E3V42_07555;Dbxref=NCBI_GP:TMR83385.1;Name=TMR83385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=E3V42_07555;product=50S ribosomal protein L1;protein_id=TMR83385.1;transl_table=11 SOQV01000061.1 Genbank gene 14375 14602 . + . ID=gene-E3V42_07560;Name=E3V42_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07560 SOQV01000061.1 Protein Homology CDS 14375 14602 . + 0 ID=cds-TMR83386.1;Parent=gene-E3V42_07560;Dbxref=NCBI_GP:TMR83386.1;Name=TMR83386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152039.1;locus_tag=E3V42_07560;product=hypothetical protein;protein_id=TMR83386.1;transl_table=11 SOQV01000061.1 Genbank gene 14599 15024 . - . ID=gene-E3V42_07565;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=E3V42_07565 SOQV01000061.1 Protein Homology CDS 14599 15024 . - 0 ID=cds-TMR83387.1;Parent=gene-E3V42_07565;Dbxref=NCBI_GP:TMR83387.1;Name=TMR83387.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358149.1;locus_tag=E3V42_07565;product=50S ribosomal protein L11;protein_id=TMR83387.1;transl_table=11 SOQV01000061.1 Genbank gene 15333 16049 . - . ID=gene-E3V42_07570;Name=E3V42_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07570 SOQV01000061.1 Protein Homology CDS 15333 16049 . - 0 ID=cds-TMR83388.1;Parent=gene-E3V42_07570;Dbxref=NCBI_GP:TMR83388.1;Name=TMR83388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358148.1;locus_tag=E3V42_07570;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=TMR83388.1;transl_table=11 SOQV01000061.1 Genbank pseudogene 16104 16175 . + . ID=gene-E3V42_07575;Name=E3V42_07575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07575;pseudo=true SOQV01000061.1 Protein Homology CDS 16104 16175 . + 0 ID=cds-E3V42_07575;Parent=gene-E3V42_07575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_07575;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000061.1 Genbank gene 16155 16628 . - . ID=gene-E3V42_07580;Name=E3V42_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07580 SOQV01000061.1 Protein Homology CDS 16155 16628 . - 0 ID=cds-TMR83389.1;Parent=gene-E3V42_07580;Dbxref=NCBI_GP:TMR83389.1;Name=TMR83389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446674.1;locus_tag=E3V42_07580;product=HIT family protein;protein_id=TMR83389.1;transl_table=11 SOQV01000061.1 Genbank gene 16630 17667 . - . ID=gene-E3V42_07585;Name=E3V42_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07585 SOQV01000061.1 Protein Homology CDS 16630 17667 . - 0 ID=cds-TMR83390.1;Parent=gene-E3V42_07585;Dbxref=NCBI_GP:TMR83390.1;Name=TMR83390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446675.1;locus_tag=E3V42_07585;product=M42 family peptidase;protein_id=TMR83390.1;transl_table=11 SOQV01000061.1 Genbank gene 17871 19211 . - . ID=gene-E3V42_07590;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=E3V42_07590 SOQV01000061.1 Protein Homology CDS 17871 19211 . - 0 ID=cds-TMR83391.1;Parent=gene-E3V42_07590;Dbxref=NCBI_GP:TMR83391.1;Name=TMR83391.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446676.1;locus_tag=E3V42_07590;product=branched-chain amino acid transport system II carrier protein;protein_id=TMR83391.1;transl_table=11 SOQV01000061.1 Genbank gene 19368 19655 . - . ID=gene-E3V42_07595;Name=E3V42_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07595 SOQV01000061.1 Protein Homology CDS 19368 19655 . - 0 ID=cds-TMR83392.1;Parent=gene-E3V42_07595;Dbxref=NCBI_GP:TMR83392.1;Name=TMR83392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446677.1;locus_tag=E3V42_07595;product=rhodanese-like domain-containing protein;protein_id=TMR83392.1;transl_table=11 SOQV01000061.1 Genbank gene 19666 19902 . - . ID=gene-E3V42_07600;Name=E3V42_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07600 SOQV01000061.1 Protein Homology CDS 19666 19902 . - 0 ID=cds-TMR83393.1;Parent=gene-E3V42_07600;Dbxref=NCBI_GP:TMR83393.1;Name=TMR83393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1%2CRefSeq:WP_001811927.1;locus_tag=E3V42_07600;product=hypothetical protein;protein_id=TMR83393.1;transl_table=11 SOQV01000061.1 Genbank gene 19906 20484 . - . ID=gene-E3V42_07605;Name=E3V42_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07605 SOQV01000061.1 Protein Homology CDS 19906 20484 . - 0 ID=cds-TMR83394.1;Parent=gene-E3V42_07605;Dbxref=NCBI_GP:TMR83394.1;Name=TMR83394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358142.1;locus_tag=E3V42_07605;product=uracil-DNA glycosylase family protein;protein_id=TMR83394.1;transl_table=11 SOQV01000061.1 Genbank gene 20527 21927 . - . ID=gene-E3V42_07610;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=E3V42_07610 SOQV01000061.1 Protein Homology CDS 20527 21927 . - 0 ID=cds-TMR83395.1;Parent=gene-E3V42_07610;Dbxref=NCBI_GP:TMR83395.1;Name=TMR83395.1;gbkey=CDS;gene=pepV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358141.1;locus_tag=E3V42_07610;product=dipeptidase PepV;protein_id=TMR83395.1;transl_table=11 SOQV01000061.1 Genbank gene 21940 22545 . - . ID=gene-E3V42_07615;Name=E3V42_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07615 SOQV01000061.1 Protein Homology CDS 21940 22545 . - 0 ID=cds-TMR83396.1;Parent=gene-E3V42_07615;Dbxref=NCBI_GP:TMR83396.1;Name=TMR83396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358140.1;locus_tag=E3V42_07615;product=nitroreductase family protein;protein_id=TMR83396.1;transl_table=11 SOQV01000061.1 Genbank gene 22716 23516 . + . ID=gene-E3V42_07620;Name=E3V42_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07620 SOQV01000061.1 Protein Homology CDS 22716 23516 . + 0 ID=cds-TMR83397.1;Parent=gene-E3V42_07620;Dbxref=NCBI_GP:TMR83397.1;Name=TMR83397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446681.1;locus_tag=E3V42_07620;product=amino acid ABC transporter substrate-binding protein;protein_id=TMR83397.1;transl_table=11 SOQV01000061.1 Genbank gene 23582 24415 . - . ID=gene-E3V42_07625;Name=E3V42_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07625 SOQV01000061.1 Protein Homology CDS 23582 24415 . - 0 ID=cds-TMR83398.1;Parent=gene-E3V42_07625;Dbxref=NCBI_GP:TMR83398.1;Name=TMR83398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446682.1;locus_tag=E3V42_07625;product=metallophosphoesterase;protein_id=TMR83398.1;transl_table=11 SOQV01000061.1 Genbank gene 24405 26252 . - . ID=gene-E3V42_07630;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=E3V42_07630 SOQV01000061.1 Protein Homology CDS 24405 26252 . - 0 ID=cds-TMR83399.1;Parent=gene-E3V42_07630;Dbxref=NCBI_GP:TMR83399.1;Name=TMR83399.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358137.1;locus_tag=E3V42_07630;product=excinuclease ABC subunit UvrC;protein_id=TMR83399.1;transl_table=11 SOQV01000061.1 Genbank gene 26291 26992 . - . ID=gene-E3V42_07635;Name=E3V42_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07635 SOQV01000061.1 Protein Homology CDS 26291 26992 . - 0 ID=cds-TMR83400.1;Parent=gene-E3V42_07635;Dbxref=NCBI_GP:TMR83400.1;Name=TMR83400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446684.1;locus_tag=E3V42_07635;product=matrixin family metalloprotease;protein_id=TMR83400.1;transl_table=11 SOQV01000061.1 Genbank gene 27071 28303 . - . ID=gene-E3V42_07640;Name=murN;gbkey=Gene;gene=murN;gene_biotype=protein_coding;locus_tag=E3V42_07640 SOQV01000061.1 Protein Homology CDS 27071 28303 . - 0 ID=cds-TMR83401.1;Parent=gene-E3V42_07640;Dbxref=NCBI_GP:TMR83401.1;Name=TMR83401.1;gbkey=CDS;gene=murN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358135.1;locus_tag=E3V42_07640;product=peptidoglycan bridge formation alanyltransferase MurN;protein_id=TMR83401.1;transl_table=11 SOQV01000061.1 Genbank gene 28308 29528 . - . ID=gene-E3V42_07645;Name=E3V42_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07645 SOQV01000061.1 Protein Homology CDS 28308 29528 . - 0 ID=cds-TMR83402.1;Parent=gene-E3V42_07645;Dbxref=NCBI_GP:TMR83402.1;Name=TMR83402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358134.1;locus_tag=E3V42_07645;product=aminoacyltransferase;protein_id=TMR83402.1;transl_table=11 SOQV01000061.1 Genbank gene 29659 30438 . - . ID=gene-E3V42_07650;Name=E3V42_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07650 SOQV01000061.1 Protein Homology CDS 29659 30438 . - 0 ID=cds-TMR83403.1;Parent=gene-E3V42_07650;Dbxref=NCBI_GP:TMR83403.1;Name=TMR83403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358133.1;locus_tag=E3V42_07650;product=esterase family protein;protein_id=TMR83403.1;transl_table=11 SOQV01000061.1 Genbank gene 30507 32168 . - . ID=gene-E3V42_07655;Name=E3V42_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07655 SOQV01000061.1 Protein Homology CDS 30507 32168 . - 0 ID=cds-TMR83404.1;Parent=gene-E3V42_07655;Dbxref=NCBI_GP:TMR83404.1;Name=TMR83404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358132.1;locus_tag=E3V42_07655;product=ribonuclease J;protein_id=TMR83404.1;transl_table=11 SOQV01000061.1 Genbank gene 32343 34577 . - . ID=gene-E3V42_07660;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=E3V42_07660 SOQV01000061.1 Protein Homology CDS 32343 34577 . - 0 ID=cds-TMR83405.1;Parent=gene-E3V42_07660;Dbxref=NCBI_GP:TMR83405.1;Name=TMR83405.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358131.1;locus_tag=E3V42_07660;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TMR83405.1;transl_table=11 SOQV01000061.1 Genbank gene 34742 35599 . + . ID=gene-E3V42_07665;Name=E3V42_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07665 SOQV01000061.1 Protein Homology CDS 34742 35599 . + 0 ID=cds-TMR83406.1;Parent=gene-E3V42_07665;Dbxref=NCBI_GP:TMR83406.1;Name=TMR83406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446690.1;locus_tag=E3V42_07665;product=ATP-binding cassette domain-containing protein;protein_id=TMR83406.1;transl_table=11 SOQV01000061.1 Genbank gene 35609 36268 . + . ID=gene-E3V42_07670;Name=E3V42_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07670 SOQV01000061.1 Protein Homology CDS 35609 36268 . + 0 ID=cds-TMR83407.1;Parent=gene-E3V42_07670;Dbxref=NCBI_GP:TMR83407.1;Name=TMR83407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446693.1;locus_tag=E3V42_07670;product=amino acid ABC transporter permease;protein_id=TMR83407.1;transl_table=11 SOQV01000061.1 Genbank pseudogene 36388 36457 . - . ID=gene-E3V42_07675;Name=E3V42_07675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07675;pseudo=true SOQV01000061.1 Protein Homology CDS 36388 36457 . - 0 ID=cds-E3V42_07675;Parent=gene-E3V42_07675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_07675;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000061.1 Genbank gene 36597 37799 . + . ID=gene-E3V42_07680;Name=E3V42_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07680 SOQV01000061.1 Protein Homology CDS 36597 37799 . + 0 ID=cds-TMR83408.1;Parent=gene-E3V42_07680;Dbxref=NCBI_GP:TMR83408.1;Name=TMR83408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358125.1;locus_tag=E3V42_07680;product=oxidoreductase;protein_id=TMR83408.1;transl_table=11 SOQV01000061.1 Genbank gene 38120 39001 . - . ID=gene-E3V42_07685;Name=E3V42_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07685 SOQV01000061.1 Protein Homology CDS 38120 39001 . - 0 ID=cds-TMR83409.1;Parent=gene-E3V42_07685;Dbxref=NCBI_GP:TMR83409.1;Name=TMR83409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=E3V42_07685;product=fructose-bisphosphate aldolase;protein_id=TMR83409.1;transl_table=11 SOQV01000061.1 Genbank gene 39142 40470 . - . ID=gene-E3V42_07690;Name=E3V42_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07690 SOQV01000061.1 Protein Homology CDS 39142 40470 . - 0 ID=cds-TMR83410.1;Parent=gene-E3V42_07690;Dbxref=NCBI_GP:TMR83410.1;Name=TMR83410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358123.1;locus_tag=E3V42_07690;product=HAMP domain-containing histidine kinase;protein_id=TMR83410.1;transl_table=11 SOQV01000061.1 Genbank gene 40467 41123 . - . ID=gene-E3V42_07695;Name=E3V42_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07695 SOQV01000061.1 Protein Homology CDS 40467 41123 . - 0 ID=cds-TMR83411.1;Parent=gene-E3V42_07695;Dbxref=NCBI_GP:TMR83411.1;Name=TMR83411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358122.1;locus_tag=E3V42_07695;product=response regulator transcription factor;protein_id=TMR83411.1;transl_table=11 SOQV01000061.1 Genbank gene 41163 41378 . + . ID=gene-E3V42_07700;Name=E3V42_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07700 SOQV01000061.1 Protein Homology CDS 41163 41378 . + 0 ID=cds-TMR83420.1;Parent=gene-E3V42_07700;Dbxref=NCBI_GP:TMR83420.1;Name=TMR83420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_07700;product=hypothetical protein;protein_id=TMR83420.1;transl_table=11 SOQV01000061.1 Genbank gene 41479 42240 . - . ID=gene-E3V42_07705;Name=E3V42_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07705 SOQV01000061.1 Protein Homology CDS 41479 42240 . - 0 ID=cds-TMR83412.1;Parent=gene-E3V42_07705;Dbxref=NCBI_GP:TMR83412.1;Name=TMR83412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284985.1;locus_tag=E3V42_07705;product=hypothetical protein;protein_id=TMR83412.1;transl_table=11 SOQV01000061.1 Genbank gene 42203 44023 . - . ID=gene-E3V42_07710;Name=E3V42_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07710 SOQV01000061.1 Protein Homology CDS 42203 44023 . - 0 ID=cds-TMR83413.1;Parent=gene-E3V42_07710;Dbxref=NCBI_GP:TMR83413.1;Name=TMR83413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250146.1;locus_tag=E3V42_07710;product=LysM peptidoglycan-binding domain-containing protein;protein_id=TMR83413.1;transl_table=11 SOQV01000061.1 Genbank gene 44321 45700 . - . ID=gene-E3V42_07715;Name=E3V42_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07715 SOQV01000061.1 Protein Homology CDS 44321 45700 . - 0 ID=cds-TMR83414.1;Parent=gene-E3V42_07715;Dbxref=NCBI_GP:TMR83414.1;Name=TMR83414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358120.1;locus_tag=E3V42_07715;product=ABC transporter permease;protein_id=TMR83414.1;transl_table=11 SOQV01000061.1 Genbank gene 45756 46403 . - . ID=gene-E3V42_07720;Name=E3V42_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07720 SOQV01000061.1 Protein Homology CDS 45756 46403 . - 0 ID=cds-TMR83415.1;Parent=gene-E3V42_07720;Dbxref=NCBI_GP:TMR83415.1;Name=TMR83415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358119.1;locus_tag=E3V42_07720;product=ABC transporter ATP-binding protein;protein_id=TMR83415.1;transl_table=11 SOQV01000061.1 Genbank gene 46530 47807 . - . ID=gene-E3V42_07725;Name=E3V42_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07725 SOQV01000061.1 Protein Homology CDS 46530 47807 . - 0 ID=cds-TMR83416.1;Parent=gene-E3V42_07725;Dbxref=NCBI_GP:TMR83416.1;Name=TMR83416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358118.1;locus_tag=E3V42_07725;product=ABC transporter permease;protein_id=TMR83416.1;transl_table=11 SOQV01000061.1 Genbank pseudogene 48024 48116 . - . ID=gene-E3V42_07730;Name=E3V42_07730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07730;pseudo=true SOQV01000061.1 Protein Homology CDS 48024 48116 . - 0 ID=cds-E3V42_07730;Parent=gene-E3V42_07730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=E3V42_07730;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000061.1 Genbank gene 48110 48460 . - . ID=gene-E3V42_07735;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=E3V42_07735 SOQV01000061.1 Protein Homology CDS 48110 48460 . - 0 ID=cds-TMR83417.1;Parent=gene-E3V42_07735;Dbxref=NCBI_GP:TMR83417.1;Name=TMR83417.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=E3V42_07735;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR83417.1;transl_table=11 SOQV01000061.1 Genbank gene 48797 49908 . - . ID=gene-E3V42_07740;Name=E3V42_07740;end_range=49908,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07740;partial=true SOQV01000061.1 Protein Homology CDS 48797 49908 . - 2 ID=cds-TMR83418.1;Parent=gene-E3V42_07740;Dbxref=NCBI_GP:TMR83418.1;Name=TMR83418.1;end_range=49908,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=E3V42_07740;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=TMR83418.1;transl_table=11 ##sequence-region SOQV01000062.1 1 55292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000062.1 Genbank region 1 55292 . + . ID=SOQV01000062.1:1..55292;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000062.1 Genbank pseudogene 1 486 . + . ID=gene-E3V42_07745;Name=E3V42_07745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07745;pseudo=true SOQV01000062.1 Protein Homology CDS 1 486 . + 2 ID=cds-E3V42_07745;Parent=gene-E3V42_07745;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_07745;product=IS630 family transposase;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 1257 3299 . + . ID=gene-E3V42_07750;Name=E3V42_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07750 SOQV01000062.1 Protein Homology CDS 1257 3299 . + 0 ID=cds-TMR83324.1;Parent=gene-E3V42_07750;Dbxref=NCBI_GP:TMR83324.1;Name=TMR83324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359394.1;locus_tag=E3V42_07750;product=bacteriocin-associated integral membrane family protein;protein_id=TMR83324.1;transl_table=11 SOQV01000062.1 Genbank gene 3301 3942 . + . ID=gene-E3V42_07755;Name=E3V42_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07755 SOQV01000062.1 Protein Homology CDS 3301 3942 . + 0 ID=cds-TMR83325.1;Parent=gene-E3V42_07755;Dbxref=NCBI_GP:TMR83325.1;Name=TMR83325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359393.1;locus_tag=E3V42_07755;product=ABC transporter ATP-binding protein;protein_id=TMR83325.1;transl_table=11 SOQV01000062.1 Genbank gene 3929 4243 . + . ID=gene-E3V42_07760;Name=E3V42_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07760 SOQV01000062.1 Protein Homology CDS 3929 4243 . + 0 ID=cds-TMR83326.1;Parent=gene-E3V42_07760;Dbxref=NCBI_GP:TMR83326.1;Name=TMR83326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359392.1;locus_tag=E3V42_07760;product=hypothetical protein;protein_id=TMR83326.1;transl_table=11 SOQV01000062.1 Genbank gene 4374 5246 . + . ID=gene-E3V42_07765;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=E3V42_07765 SOQV01000062.1 Protein Homology CDS 4374 5246 . + 0 ID=cds-TMR83327.1;Parent=gene-E3V42_07765;Dbxref=NCBI_GP:TMR83327.1;Name=TMR83327.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216835.1;locus_tag=E3V42_07765;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=TMR83327.1;transl_table=11 SOQV01000062.1 Genbank pseudogene 5964 6738 . + . ID=gene-E3V42_07770;Name=E3V42_07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07770;pseudo=true SOQV01000062.1 Protein Homology CDS 5964 6738 . + 0 ID=cds-E3V42_07770;Parent=gene-E3V42_07770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227792.1;locus_tag=E3V42_07770;product=cell surface protein;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 6732 7130 . + . ID=gene-E3V42_07775;Name=E3V42_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07775 SOQV01000062.1 Protein Homology CDS 6732 7130 . + 0 ID=cds-TMR83328.1;Parent=gene-E3V42_07775;Dbxref=NCBI_GP:TMR83328.1;Name=TMR83328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230068.1;locus_tag=E3V42_07775;product=hypothetical protein;protein_id=TMR83328.1;transl_table=11 SOQV01000062.1 Genbank gene 7331 8209 . + . ID=gene-E3V42_07780;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=E3V42_07780 SOQV01000062.1 Protein Homology CDS 7331 8209 . + 0 ID=cds-TMR83329.1;Parent=gene-E3V42_07780;Dbxref=NCBI_GP:TMR83329.1;Name=TMR83329.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359390.1;locus_tag=E3V42_07780;product=ribosome small subunit-dependent GTPase A;protein_id=TMR83329.1;transl_table=11 SOQV01000062.1 Genbank gene 8220 8876 . + . ID=gene-E3V42_07785;Name=E3V42_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07785 SOQV01000062.1 Protein Homology CDS 8220 8876 . + 0 ID=cds-TMR83330.1;Parent=gene-E3V42_07785;Dbxref=NCBI_GP:TMR83330.1;Name=TMR83330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359389.1;locus_tag=E3V42_07785;product=ribulose-phosphate 3-epimerase;protein_id=TMR83330.1;transl_table=11 SOQV01000062.1 Genbank gene 8839 9501 . + . ID=gene-E3V42_07790;Name=E3V42_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07790 SOQV01000062.1 Protein Homology CDS 8839 9501 . + 0 ID=cds-TMR83331.1;Parent=gene-E3V42_07790;Dbxref=NCBI_GP:TMR83331.1;Name=TMR83331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445438.1;locus_tag=E3V42_07790;product=thiamine diphosphokinase;protein_id=TMR83331.1;transl_table=11 SOQV01000062.1 Genbank gene 9461 10759 . + . ID=gene-E3V42_07795;Name=E3V42_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07795 SOQV01000062.1 Protein Homology CDS 9461 10759 . + 0 ID=cds-TMR83332.1;Parent=gene-E3V42_07795;Dbxref=NCBI_GP:TMR83332.1;Name=TMR83332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445439.1;locus_tag=E3V42_07795;product=DNA recombination protein RmuC;protein_id=TMR83332.1;transl_table=11 SOQV01000062.1 Genbank gene 10749 11693 . + . ID=gene-E3V42_07800;Name=E3V42_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07800 SOQV01000062.1 Protein Homology CDS 10749 11693 . + 0 ID=cds-TMR83333.1;Parent=gene-E3V42_07800;Dbxref=NCBI_GP:TMR83333.1;Name=TMR83333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703190.1;locus_tag=E3V42_07800;product=HD domain-containing protein;protein_id=TMR83333.1;transl_table=11 SOQV01000062.1 Genbank gene 11695 11991 . - . ID=gene-E3V42_07805;Name=E3V42_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07805 SOQV01000062.1 Protein Homology CDS 11695 11991 . - 0 ID=cds-TMR83334.1;Parent=gene-E3V42_07805;Dbxref=NCBI_GP:TMR83334.1;Name=TMR83334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843947.1;locus_tag=E3V42_07805;product=hypothetical protein;protein_id=TMR83334.1;transl_table=11 SOQV01000062.1 Genbank gene 11957 12784 . + . ID=gene-E3V42_07810;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=E3V42_07810 SOQV01000062.1 Protein Homology CDS 11957 12784 . + 0 ID=cds-TMR83335.1;Parent=gene-E3V42_07810;Dbxref=NCBI_GP:TMR83335.1;Name=TMR83335.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359385.1;locus_tag=E3V42_07810;product=pur operon repressor;protein_id=TMR83335.1;transl_table=11 SOQV01000062.1 Genbank gene 12845 14095 . + . ID=gene-E3V42_07815;Name=E3V42_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07815 SOQV01000062.1 Protein Homology CDS 12845 14095 . + 0 ID=cds-TMR83336.1;Parent=gene-E3V42_07815;Dbxref=NCBI_GP:TMR83336.1;Name=TMR83336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445443.1;locus_tag=E3V42_07815;product=diaminopimelate decarboxylase;protein_id=TMR83336.1;transl_table=11 SOQV01000062.1 Genbank gene 14221 15015 . + . ID=gene-E3V42_07820;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=E3V42_07820 SOQV01000062.1 Protein Homology CDS 14221 15015 . + 0 ID=cds-TMR83337.1;Parent=gene-E3V42_07820;Dbxref=NCBI_GP:TMR83337.1;Name=TMR83337.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359383.1;locus_tag=E3V42_07820;product=pyruvate formate lyase-activating protein;protein_id=TMR83337.1;transl_table=11 SOQV01000062.1 Genbank gene 15090 16016 . - . ID=gene-E3V42_07825;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=E3V42_07825 SOQV01000062.1 Protein Homology CDS 15090 16016 . - 0 ID=cds-TMR83338.1;Parent=gene-E3V42_07825;Dbxref=NCBI_GP:TMR83338.1;Name=TMR83338.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359382.1;locus_tag=E3V42_07825;product=membrane protein insertase YidC;protein_id=TMR83338.1;transl_table=11 SOQV01000062.1 Genbank gene 16094 16372 . - . ID=gene-E3V42_07830;Name=E3V42_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07830 SOQV01000062.1 Protein Homology CDS 16094 16372 . - 0 ID=cds-TMR83339.1;Parent=gene-E3V42_07830;Dbxref=NCBI_GP:TMR83339.1;Name=TMR83339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359381.1;locus_tag=E3V42_07830;product=acylphosphatase;protein_id=TMR83339.1;transl_table=11 SOQV01000062.1 Genbank gene 16406 17146 . + . ID=gene-E3V42_07835;Name=E3V42_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07835 SOQV01000062.1 Protein Homology CDS 16406 17146 . + 0 ID=cds-TMR83340.1;Parent=gene-E3V42_07835;Dbxref=NCBI_GP:TMR83340.1;Name=TMR83340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445451.1;locus_tag=E3V42_07835;product=RNA methyltransferase;protein_id=TMR83340.1;transl_table=11 SOQV01000062.1 Genbank gene 17201 17884 . + . ID=gene-E3V42_07840;Name=E3V42_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07840 SOQV01000062.1 Protein Homology CDS 17201 17884 . + 0 ID=cds-TMR83341.1;Parent=gene-E3V42_07840;Dbxref=NCBI_GP:TMR83341.1;Name=TMR83341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445452.1;locus_tag=E3V42_07840;product=Bax inhibitor-1/YccA family protein;protein_id=TMR83341.1;transl_table=11 SOQV01000062.1 Genbank pseudogene 17890 18022 . - . ID=gene-E3V42_07845;Name=E3V42_07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07845;pseudo=true SOQV01000062.1 Protein Homology CDS 17890 18022 . - 0 ID=cds-E3V42_07845;Parent=gene-E3V42_07845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816583.1;locus_tag=E3V42_07845;product=OxaA precursor;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 17996 18988 . + . ID=gene-E3V42_07850;Name=E3V42_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07850 SOQV01000062.1 Protein Homology CDS 17996 18988 . + 0 ID=cds-TMR83342.1;Parent=gene-E3V42_07850;Dbxref=NCBI_GP:TMR83342.1;Name=TMR83342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445453.1;locus_tag=E3V42_07850;product=aspartate--ammonia ligase;protein_id=TMR83342.1;transl_table=11 SOQV01000062.1 Genbank gene 19053 19592 . + . ID=gene-E3V42_07855;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=E3V42_07855 SOQV01000062.1 Protein Homology CDS 19053 19592 . + 0 ID=cds-TMR83343.1;Parent=gene-E3V42_07855;Dbxref=NCBI_GP:TMR83343.1;Name=TMR83343.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445454.1;locus_tag=E3V42_07855;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TMR83343.1;transl_table=11 SOQV01000062.1 Genbank gene 19582 20070 . + . ID=gene-E3V42_07860;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=E3V42_07860 SOQV01000062.1 Protein Homology CDS 19582 20070 . + 0 ID=cds-TMR83344.1;Parent=gene-E3V42_07860;Dbxref=NCBI_GP:TMR83344.1;Name=TMR83344.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445455.1;locus_tag=E3V42_07860;product=pantetheine-phosphate adenylyltransferase;protein_id=TMR83344.1;transl_table=11 SOQV01000062.1 Genbank gene 20054 21091 . + . ID=gene-E3V42_07865;Name=E3V42_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07865 SOQV01000062.1 Protein Homology CDS 20054 21091 . + 0 ID=cds-TMR83345.1;Parent=gene-E3V42_07865;Dbxref=NCBI_GP:TMR83345.1;Name=TMR83345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359374.1;locus_tag=E3V42_07865;product=PDZ domain-containing protein;protein_id=TMR83345.1;transl_table=11 SOQV01000062.1 Genbank gene 21149 21379 . + . ID=gene-E3V42_07870;Name=E3V42_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07870 SOQV01000062.1 Protein Homology CDS 21149 21379 . + 0 ID=cds-TMR83346.1;Parent=gene-E3V42_07870;Dbxref=NCBI_GP:TMR83346.1;Name=TMR83346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008719807.1;locus_tag=E3V42_07870;product=DUF1146 domain-containing protein;protein_id=TMR83346.1;transl_table=11 SOQV01000062.1 Genbank gene 21403 22686 . + . ID=gene-E3V42_07875;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=E3V42_07875 SOQV01000062.1 Protein Homology CDS 21403 22686 . + 0 ID=cds-TMR83347.1;Parent=gene-E3V42_07875;Dbxref=NCBI_GP:TMR83347.1;Name=TMR83347.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359373.1;locus_tag=E3V42_07875;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMR83347.1;transl_table=11 SOQV01000062.1 Genbank gene 22673 22867 . + . ID=gene-E3V42_07880;Name=E3V42_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07880 SOQV01000062.1 Protein Homology CDS 22673 22867 . + 0 ID=cds-TMR83348.1;Parent=gene-E3V42_07880;Dbxref=NCBI_GP:TMR83348.1;Name=TMR83348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445458.1;locus_tag=E3V42_07880;product=DNA-directed RNA polymerase subunit beta;protein_id=TMR83348.1;transl_table=11 SOQV01000062.1 Genbank gene 22906 23736 . + . ID=gene-E3V42_07885;Name=E3V42_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07885 SOQV01000062.1 Protein Homology CDS 22906 23736 . + 0 ID=cds-TMR83349.1;Parent=gene-E3V42_07885;Dbxref=NCBI_GP:TMR83349.1;Name=TMR83349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445459.1;locus_tag=E3V42_07885;product=DNA/RNA non-specific endonuclease;protein_id=TMR83349.1;transl_table=11 SOQV01000062.1 Genbank gene 23999 25330 . + . ID=gene-E3V42_07890;Name=E3V42_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07890 SOQV01000062.1 Protein Homology CDS 23999 25330 . + 0 ID=cds-TMR83350.1;Parent=gene-E3V42_07890;Dbxref=NCBI_GP:TMR83350.1;Name=TMR83350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359370.1;locus_tag=E3V42_07890;product=HlyC/CorC family transporter;protein_id=TMR83350.1;transl_table=11 SOQV01000062.1 Genbank gene 25519 25589 . - . ID=gene-E3V42_07895;Name=E3V42_07895;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_07895 SOQV01000062.1 tRNAscan-SE tRNA 25519 25589 . - . ID=rna-E3V42_07895;Parent=gene-E3V42_07895;anticodon=(pos:complement(25555..25557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_07895;product=tRNA-Cys SOQV01000062.1 tRNAscan-SE exon 25519 25589 . - . ID=exon-E3V42_07895-1;Parent=rna-E3V42_07895;anticodon=(pos:complement(25555..25557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_07895;product=tRNA-Cys SOQV01000062.1 Genbank gene 26004 29609 . + . ID=gene-E3V42_07900;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=E3V42_07900 SOQV01000062.1 Protein Homology CDS 26004 29609 . + 0 ID=cds-TMR83351.1;Parent=gene-E3V42_07900;Dbxref=NCBI_GP:TMR83351.1;Name=TMR83351.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446947.1;locus_tag=E3V42_07900;product=DNA-directed RNA polymerase subunit beta;protein_id=TMR83351.1;transl_table=11 SOQV01000062.1 Genbank gene 29675 33325 . + . ID=gene-E3V42_07905;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=E3V42_07905 SOQV01000062.1 Protein Homology CDS 29675 33325 . + 0 ID=cds-TMR83374.1;Parent=gene-E3V42_07905;Dbxref=NCBI_GP:TMR83374.1;Name=TMR83374.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446946.1;locus_tag=E3V42_07905;product=DNA-directed RNA polymerase subunit beta';protein_id=TMR83374.1;transl_table=11 SOQV01000062.1 Genbank gene 33434 33847 . + . ID=gene-E3V42_07910;Name=E3V42_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07910 SOQV01000062.1 Protein Homology CDS 33434 33847 . + 0 ID=cds-TMR83352.1;Parent=gene-E3V42_07910;Dbxref=NCBI_GP:TMR83352.1;Name=TMR83352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359367.1;locus_tag=E3V42_07910;product=nucleoside-diphosphate kinase;protein_id=TMR83352.1;transl_table=11 SOQV01000062.1 Genbank gene 34095 35015 . - . ID=gene-E3V42_07915;Name=E3V42_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07915 SOQV01000062.1 Protein Homology CDS 34095 35015 . - 0 ID=cds-TMR83353.1;Parent=gene-E3V42_07915;Dbxref=NCBI_GP:TMR83353.1;Name=TMR83353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V42_07915;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR83353.1;transl_table=11 SOQV01000062.1 Genbank gene 35034 36305 . - . ID=gene-E3V42_07920;Name=E3V42_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07920 SOQV01000062.1 Protein Homology CDS 35034 36305 . - 0 ID=cds-TMR83354.1;Parent=gene-E3V42_07920;Dbxref=NCBI_GP:TMR83354.1;Name=TMR83354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750731.1;locus_tag=E3V42_07920;product=trypsin-like serine protease;protein_id=TMR83354.1;transl_table=11 SOQV01000062.1 Genbank gene 36616 36804 . + . ID=gene-E3V42_07925;Name=E3V42_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07925 SOQV01000062.1 Protein Homology CDS 36616 36804 . + 0 ID=cds-TMR83375.1;Parent=gene-E3V42_07925;Dbxref=NCBI_GP:TMR83375.1;Name=TMR83375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809169.1;locus_tag=E3V42_07925;product=hypothetical protein;protein_id=TMR83375.1;transl_table=11 SOQV01000062.1 Genbank gene 36959 37129 . - . ID=gene-E3V42_07930;Name=E3V42_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07930 SOQV01000062.1 Protein Homology CDS 36959 37129 . - 0 ID=cds-TMR83355.1;Parent=gene-E3V42_07930;Dbxref=NCBI_GP:TMR83355.1;Name=TMR83355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359356.1;locus_tag=E3V42_07930;product=hypothetical protein;protein_id=TMR83355.1;transl_table=11 SOQV01000062.1 Genbank gene 37320 38183 . + . ID=gene-E3V42_07935;Name=E3V42_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07935 SOQV01000062.1 Protein Homology CDS 37320 38183 . + 0 ID=cds-TMR83356.1;Parent=gene-E3V42_07935;Dbxref=NCBI_GP:TMR83356.1;Name=TMR83356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446457.1;locus_tag=E3V42_07935;product=XRE family transcriptional regulator;protein_id=TMR83356.1;transl_table=11 SOQV01000062.1 Genbank gene 38585 39820 . - . ID=gene-E3V42_07940;Name=E3V42_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07940 SOQV01000062.1 Protein Homology CDS 38585 39820 . - 0 ID=cds-TMR83357.1;Parent=gene-E3V42_07940;Dbxref=NCBI_GP:TMR83357.1;Name=TMR83357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446879.1;locus_tag=E3V42_07940;product=ATP-binding protein;protein_id=TMR83357.1;transl_table=11 SOQV01000062.1 Genbank pseudogene 40399 40476 . + . ID=gene-E3V42_07945;Name=E3V42_07945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07945;pseudo=true SOQV01000062.1 Protein Homology CDS 40399 40476 . + 0 ID=cds-E3V42_07945;Parent=gene-E3V42_07945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809593.1;locus_tag=E3V42_07945;product=cytidylate kinase;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 40766 42658 . + . ID=gene-E3V42_07950;Name=E3V42_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07950 SOQV01000062.1 Protein Homology CDS 40766 42658 . + 0 ID=cds-TMR83358.1;Parent=gene-E3V42_07950;Dbxref=NCBI_GP:TMR83358.1;Name=TMR83358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008378661.1;locus_tag=E3V42_07950;product=PTS beta-glucoside transporter subunit EIIBCA;protein_id=TMR83358.1;transl_table=11 SOQV01000062.1 Genbank gene 42742 43557 . + . ID=gene-E3V42_07955;Name=E3V42_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07955 SOQV01000062.1 Protein Homology CDS 42742 43557 . + 0 ID=cds-TMR83359.1;Parent=gene-E3V42_07955;Dbxref=NCBI_GP:TMR83359.1;Name=TMR83359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372516.1;locus_tag=E3V42_07955;product=PRD domain-containing protein;protein_id=TMR83359.1;transl_table=11 SOQV01000062.1 Genbank pseudogene 43654 44235 . - . ID=gene-E3V42_07960;Name=E3V42_07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_07960;pseudo=true SOQV01000062.1 Protein Homology CDS 43654 44235 . - 0 ID=cds-E3V42_07960;Parent=gene-E3V42_07960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030523.1;locus_tag=E3V42_07960;product=histidine phosphatase family protein;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 44265 45104 . - . ID=gene-E3V42_07965;Name=E3V42_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07965 SOQV01000062.1 Protein Homology CDS 44265 45104 . - 0 ID=cds-TMR83360.1;Parent=gene-E3V42_07965;Dbxref=NCBI_GP:TMR83360.1;Name=TMR83360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372110.1;locus_tag=E3V42_07965;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR83360.1;transl_table=11 SOQV01000062.1 Genbank gene 45201 46082 . - . ID=gene-E3V42_07970;Name=E3V42_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07970 SOQV01000062.1 Protein Homology CDS 45201 46082 . - 0 ID=cds-TMR83361.1;Parent=gene-E3V42_07970;Dbxref=NCBI_GP:TMR83361.1;Name=TMR83361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609060.1;locus_tag=E3V42_07970;product=AraC family transcriptional regulator;protein_id=TMR83361.1;transl_table=11 SOQV01000062.1 Genbank gene 46190 47626 . + . ID=gene-E3V42_07975;Name=E3V42_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07975 SOQV01000062.1 Protein Homology CDS 46190 47626 . + 0 ID=cds-TMR83362.1;Parent=gene-E3V42_07975;Dbxref=NCBI_GP:TMR83362.1;Name=TMR83362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033146.1;locus_tag=E3V42_07975;product=glycoside hydrolase family 1 protein;protein_id=TMR83362.1;transl_table=11 SOQV01000062.1 Genbank gene 47675 48040 . + . ID=gene-E3V42_07980;Name=E3V42_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07980 SOQV01000062.1 Protein Homology CDS 47675 48040 . + 0 ID=cds-TMR83363.1;Parent=gene-E3V42_07980;Dbxref=NCBI_GP:TMR83363.1;Name=TMR83363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357869.1;locus_tag=E3V42_07980;product=antibiotic biosynthesis monooxygenase;protein_id=TMR83363.1;transl_table=11 SOQV01000062.1 Genbank gene 48299 48475 . + . ID=gene-E3V42_07985;Name=E3V42_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07985 SOQV01000062.1 Protein Homology CDS 48299 48475 . + 0 ID=cds-TMR83364.1;Parent=gene-E3V42_07985;Dbxref=NCBI_GP:TMR83364.1;Name=TMR83364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050754.1;locus_tag=E3V42_07985;product=hypothetical protein;protein_id=TMR83364.1;transl_table=11 SOQV01000062.1 Genbank gene 48475 49086 . + . ID=gene-E3V42_07990;Name=E3V42_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07990 SOQV01000062.1 Protein Homology CDS 48475 49086 . + 0 ID=cds-TMR83365.1;Parent=gene-E3V42_07990;Dbxref=NCBI_GP:TMR83365.1;Name=TMR83365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595241.1;locus_tag=E3V42_07990;product=cell filamentation protein Fic;protein_id=TMR83365.1;transl_table=11 SOQV01000062.1 Genbank gene 49326 51539 . + . ID=gene-E3V42_07995;Name=E3V42_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_07995 SOQV01000062.1 Protein Homology CDS 49326 51539 . + 0 ID=cds-TMR83366.1;Parent=gene-E3V42_07995;Dbxref=NCBI_GP:TMR83366.1;Name=TMR83366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357878.1;locus_tag=E3V42_07995;product=alpha-xylosidase;protein_id=TMR83366.1;transl_table=11 SOQV01000062.1 Genbank gene 51761 52237 . - . ID=gene-E3V42_08000;Name=E3V42_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08000 SOQV01000062.1 Protein Homology CDS 51761 52237 . - 0 ID=cds-TMR83367.1;Parent=gene-E3V42_08000;Dbxref=NCBI_GP:TMR83367.1;Name=TMR83367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446873.1;locus_tag=E3V42_08000;product=glutathione peroxidase;protein_id=TMR83367.1;transl_table=11 SOQV01000062.1 Genbank gene 52234 52812 . - . ID=gene-E3V42_08005;Name=E3V42_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08005 SOQV01000062.1 Protein Homology CDS 52234 52812 . - 0 ID=cds-TMR83368.1;Parent=gene-E3V42_08005;Dbxref=NCBI_GP:TMR83368.1;Name=TMR83368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446872.1;locus_tag=E3V42_08005;product=DUF3278 domain-containing protein;protein_id=TMR83368.1;transl_table=11 SOQV01000062.1 Genbank gene 52839 53165 . - . ID=gene-E3V42_08010;Name=E3V42_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08010 SOQV01000062.1 Protein Homology CDS 52839 53165 . - 0 ID=cds-TMR83369.1;Parent=gene-E3V42_08010;Dbxref=NCBI_GP:TMR83369.1;Name=TMR83369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838777.1;locus_tag=E3V42_08010;product=hypothetical protein;protein_id=TMR83369.1;transl_table=11 SOQV01000062.1 Genbank gene 53176 53418 . - . ID=gene-E3V42_08015;Name=E3V42_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08015 SOQV01000062.1 Protein Homology CDS 53176 53418 . - 0 ID=cds-TMR83370.1;Parent=gene-E3V42_08015;Dbxref=NCBI_GP:TMR83370.1;Name=TMR83370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357894.1;locus_tag=E3V42_08015;product=hypothetical protein;protein_id=TMR83370.1;transl_table=11 SOQV01000062.1 Genbank gene 53429 53971 . - . ID=gene-E3V42_08020;Name=E3V42_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08020 SOQV01000062.1 Protein Homology CDS 53429 53971 . - 0 ID=cds-TMR83371.1;Parent=gene-E3V42_08020;Dbxref=NCBI_GP:TMR83371.1;Name=TMR83371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446870.1;locus_tag=E3V42_08020;product=DUF3278 domain-containing protein;protein_id=TMR83371.1;transl_table=11 SOQV01000062.1 Genbank gene 53999 54181 . - . ID=gene-E3V42_08025;Name=E3V42_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08025 SOQV01000062.1 Protein Homology CDS 53999 54181 . - 0 ID=cds-TMR83372.1;Parent=gene-E3V42_08025;Dbxref=NCBI_GP:TMR83372.1;Name=TMR83372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357895.1;locus_tag=E3V42_08025;product=transcriptional regulator;protein_id=TMR83372.1;transl_table=11 SOQV01000062.1 Genbank pseudogene 54389 54802 . + . ID=gene-E3V42_08030;Name=E3V42_08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08030;pseudo=true SOQV01000062.1 Protein Homology CDS 54389 54802 . + 0 ID=cds-E3V42_08030;Parent=gene-E3V42_08030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_08030;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000062.1 Genbank gene 54835 55292 . - . ID=gene-E3V42_08035;Name=E3V42_08035;end_range=55292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08035;partial=true SOQV01000062.1 Protein Homology CDS 54835 55292 . - 2 ID=cds-TMR83373.1;Parent=gene-E3V42_08035;Dbxref=NCBI_GP:TMR83373.1;Name=TMR83373.1;end_range=55292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_08035;partial=true;product=IS630 family transposase;protein_id=TMR83373.1;transl_table=11 ##sequence-region SOQV01000063.1 1 11823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000063.1 Genbank region 1 11823 . + . ID=SOQV01000063.1:1..11823;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000063.1 Genbank gene 1 228 . + . ID=gene-E3V42_08040;Name=E3V42_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08040;partial=true;start_range=.,1 SOQV01000063.1 Protein Homology CDS 1 228 . + 0 ID=cds-TMR83294.1;Parent=gene-E3V42_08040;Dbxref=NCBI_GP:TMR83294.1;Name=TMR83294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358904.1;locus_tag=E3V42_08040;partial=true;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=TMR83294.1;start_range=.,1;transl_table=11 SOQV01000063.1 Genbank gene 267 1178 . - . ID=gene-E3V42_08045;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=E3V42_08045 SOQV01000063.1 Protein Homology CDS 267 1178 . - 0 ID=cds-TMR83295.1;Parent=gene-E3V42_08045;Dbxref=NCBI_GP:TMR83295.1;Name=TMR83295.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358905.1;locus_tag=E3V42_08045;product=thioredoxin-disulfide reductase;protein_id=TMR83295.1;transl_table=11 SOQV01000063.1 Genbank gene 1244 1480 . - . ID=gene-E3V42_08050;Name=E3V42_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08050 SOQV01000063.1 Protein Homology CDS 1244 1480 . - 0 ID=cds-TMR83296.1;Parent=gene-E3V42_08050;Dbxref=NCBI_GP:TMR83296.1;Name=TMR83296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358906.1;locus_tag=E3V42_08050;product=DUF4059 family protein;protein_id=TMR83296.1;transl_table=11 SOQV01000063.1 Genbank gene 1546 2289 . - . ID=gene-E3V42_08055;Name=E3V42_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08055 SOQV01000063.1 Protein Homology CDS 1546 2289 . - 0 ID=cds-TMR83297.1;Parent=gene-E3V42_08055;Dbxref=NCBI_GP:TMR83297.1;Name=TMR83297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446483.1;locus_tag=E3V42_08055;product=amino acid ABC transporter ATP-binding protein;protein_id=TMR83297.1;transl_table=11 SOQV01000063.1 Genbank gene 2289 3089 . - . ID=gene-E3V42_08060;Name=E3V42_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08060 SOQV01000063.1 Protein Homology CDS 2289 3089 . - 0 ID=cds-TMR83298.1;Parent=gene-E3V42_08060;Dbxref=NCBI_GP:TMR83298.1;Name=TMR83298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358908.1;locus_tag=E3V42_08060;product=amino acid ABC transporter permease;protein_id=TMR83298.1;transl_table=11 SOQV01000063.1 Genbank gene 3247 3603 . - . ID=gene-E3V42_08065;Name=E3V42_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08065 SOQV01000063.1 Protein Homology CDS 3247 3603 . - 0 ID=cds-TMR83299.1;Parent=gene-E3V42_08065;Dbxref=NCBI_GP:TMR83299.1;Name=TMR83299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358909.1;locus_tag=E3V42_08065;product=arsenate reductase family protein;protein_id=TMR83299.1;transl_table=11 SOQV01000063.1 Genbank gene 3609 4127 . - . ID=gene-E3V42_08070;Name=E3V42_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08070 SOQV01000063.1 Protein Homology CDS 3609 4127 . - 0 ID=cds-TMR83300.1;Parent=gene-E3V42_08070;Dbxref=NCBI_GP:TMR83300.1;Name=TMR83300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358910.1;locus_tag=E3V42_08070;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=TMR83300.1;transl_table=11 SOQV01000063.1 Genbank gene 4127 4621 . - . ID=gene-E3V42_08075;Name=E3V42_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08075 SOQV01000063.1 Protein Homology CDS 4127 4621 . - 0 ID=cds-TMR83301.1;Parent=gene-E3V42_08075;Dbxref=NCBI_GP:TMR83301.1;Name=TMR83301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446487.1;locus_tag=E3V42_08075;product=N-acetyltransferase;protein_id=TMR83301.1;transl_table=11 SOQV01000063.1 Genbank gene 4756 5202 . + . ID=gene-E3V42_08080;Name=E3V42_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08080 SOQV01000063.1 Protein Homology CDS 4756 5202 . + 0 ID=cds-TMR83302.1;Parent=gene-E3V42_08080;Dbxref=NCBI_GP:TMR83302.1;Name=TMR83302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446488.1;locus_tag=E3V42_08080;product=DUF1836 domain-containing protein;protein_id=TMR83302.1;transl_table=11 SOQV01000063.1 Genbank gene 5199 5846 . + . ID=gene-E3V42_08085;Name=E3V42_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08085 SOQV01000063.1 Protein Homology CDS 5199 5846 . + 0 ID=cds-TMR83303.1;Parent=gene-E3V42_08085;Dbxref=NCBI_GP:TMR83303.1;Name=TMR83303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446489.1;locus_tag=E3V42_08085;product=hemolysin III family protein;protein_id=TMR83303.1;transl_table=11 SOQV01000063.1 Genbank gene 6086 6667 . - . ID=gene-E3V42_08090;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=E3V42_08090 SOQV01000063.1 Protein Homology CDS 6086 6667 . - 0 ID=cds-TMR83304.1;Parent=gene-E3V42_08090;Dbxref=NCBI_GP:TMR83304.1;Name=TMR83304.1;gbkey=CDS;gene=pdxT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689942.1;locus_tag=E3V42_08090;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=TMR83304.1;transl_table=11 SOQV01000063.1 Genbank gene 6668 7543 . - . ID=gene-E3V42_08095;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=E3V42_08095 SOQV01000063.1 Protein Homology CDS 6668 7543 . - 0 ID=cds-TMR83305.1;Parent=gene-E3V42_08095;Dbxref=NCBI_GP:TMR83305.1;Name=TMR83305.1;gbkey=CDS;gene=pdxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446491.1;locus_tag=E3V42_08095;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=TMR83305.1;transl_table=11 SOQV01000063.1 Genbank gene 7752 8081 . - . ID=gene-E3V42_08100;Name=E3V42_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08100 SOQV01000063.1 Protein Homology CDS 7752 8081 . - 0 ID=cds-TMR83306.1;Parent=gene-E3V42_08100;Dbxref=NCBI_GP:TMR83306.1;Name=TMR83306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_08100;product=hypothetical protein;protein_id=TMR83306.1;transl_table=11 SOQV01000063.1 Genbank gene 9059 9487 . - . ID=gene-E3V42_08105;Name=E3V42_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08105 SOQV01000063.1 Protein Homology CDS 9059 9487 . - 0 ID=cds-TMR83307.1;Parent=gene-E3V42_08105;Dbxref=NCBI_GP:TMR83307.1;Name=TMR83307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284889.1;locus_tag=E3V42_08105;product=ATP-binding cassette domain-containing protein;protein_id=TMR83307.1;transl_table=11 SOQV01000063.1 Genbank gene 9575 10366 . - . ID=gene-E3V42_08110;Name=E3V42_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08110 SOQV01000063.1 Protein Homology CDS 9575 10366 . - 0 ID=cds-TMR83308.1;Parent=gene-E3V42_08110;Dbxref=NCBI_GP:TMR83308.1;Name=TMR83308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599441.1;locus_tag=E3V42_08110;product=ABC transporter permease;protein_id=TMR83308.1;transl_table=11 SOQV01000063.1 Genbank gene 10386 10964 . - . ID=gene-E3V42_08115;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=E3V42_08115 SOQV01000063.1 Protein Homology CDS 10386 10964 . - 0 ID=cds-TMR83309.1;Parent=gene-E3V42_08115;Dbxref=NCBI_GP:TMR83309.1;Name=TMR83309.1;gbkey=CDS;gene=pduL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405172.1;locus_tag=E3V42_08115;product=phosphate propanoyltransferase;protein_id=TMR83309.1;transl_table=11 SOQV01000063.1 Genbank gene 11300 11584 . + . ID=gene-E3V42_08120;Name=E3V42_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08120 SOQV01000063.1 Protein Homology CDS 11300 11584 . + 0 ID=cds-TMR83311.1;Parent=gene-E3V42_08120;Dbxref=NCBI_GP:TMR83311.1;Name=TMR83311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808732.1;locus_tag=E3V42_08120;product=transposase;protein_id=TMR83311.1;transl_table=11 SOQV01000063.1 Genbank gene 11571 11813 . + . ID=gene-E3V42_08125;Name=E3V42_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08125 SOQV01000063.1 GeneMarkS-2+ CDS 11571 11813 . + 0 ID=cds-TMR83310.1;Parent=gene-E3V42_08125;Dbxref=NCBI_GP:TMR83310.1;Name=TMR83310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_08125;product=hypothetical protein;protein_id=TMR83310.1;transl_table=11 ##sequence-region SOQV01000064.1 1 8201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000064.1 Genbank region 1 8201 . + . ID=SOQV01000064.1:1..8201;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000064.1 Genbank gene 220 405 . + . ID=gene-E3V42_08130;Name=E3V42_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08130 SOQV01000064.1 Protein Homology CDS 220 405 . + 0 ID=cds-TMR83261.1;Parent=gene-E3V42_08130;Dbxref=NCBI_GP:TMR83261.1;Name=TMR83261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263488.1;locus_tag=E3V42_08130;product=XRE family transcriptional regulator;protein_id=TMR83261.1;transl_table=11 SOQV01000064.1 Genbank gene 418 630 . + . ID=gene-E3V42_08135;Name=E3V42_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08135 SOQV01000064.1 Protein Homology CDS 418 630 . + 0 ID=cds-TMR83262.1;Parent=gene-E3V42_08135;Dbxref=NCBI_GP:TMR83262.1;Name=TMR83262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169630.1;locus_tag=E3V42_08135;product=XRE family transcriptional regulator;protein_id=TMR83262.1;transl_table=11 SOQV01000064.1 Genbank gene 670 1482 . + . ID=gene-E3V42_08140;Name=E3V42_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08140 SOQV01000064.1 Protein Homology CDS 670 1482 . + 0 ID=cds-TMR83263.1;Parent=gene-E3V42_08140;Dbxref=NCBI_GP:TMR83263.1;Name=TMR83263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236631.1;locus_tag=E3V42_08140;product=DnaD domain protein;protein_id=TMR83263.1;transl_table=11 SOQV01000064.1 Genbank gene 1492 2346 . + . ID=gene-E3V42_08145;Name=E3V42_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08145 SOQV01000064.1 Protein Homology CDS 1492 2346 . + 0 ID=cds-TMR83264.1;Parent=gene-E3V42_08145;Dbxref=NCBI_GP:TMR83264.1;Name=TMR83264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203052.1;locus_tag=E3V42_08145;product=ATP-binding protein;protein_id=TMR83264.1;transl_table=11 SOQV01000064.1 Genbank gene 2795 2962 . - . ID=gene-E3V42_08150;Name=E3V42_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08150 SOQV01000064.1 Protein Homology CDS 2795 2962 . - 0 ID=cds-TMR83265.1;Parent=gene-E3V42_08150;Dbxref=NCBI_GP:TMR83265.1;Name=TMR83265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397654.1;locus_tag=E3V42_08150;product=YjzC family protein;protein_id=TMR83265.1;transl_table=11 SOQV01000064.1 Genbank gene 3382 3621 . - . ID=gene-E3V42_08155;Name=E3V42_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08155 SOQV01000064.1 Protein Homology CDS 3382 3621 . - 0 ID=cds-TMR83266.1;Parent=gene-E3V42_08155;Dbxref=NCBI_GP:TMR83266.1;Name=TMR83266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134992.1;locus_tag=E3V42_08155;product=hypothetical protein;protein_id=TMR83266.1;transl_table=11 SOQV01000064.1 Genbank gene 3740 4006 . + . ID=gene-E3V42_08160;Name=E3V42_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08160 SOQV01000064.1 Protein Homology CDS 3740 4006 . + 0 ID=cds-TMR83267.1;Parent=gene-E3V42_08160;Dbxref=NCBI_GP:TMR83267.1;Name=TMR83267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450962.1;locus_tag=E3V42_08160;product=hypothetical protein;protein_id=TMR83267.1;transl_table=11 SOQV01000064.1 Genbank gene 4094 4351 . + . ID=gene-E3V42_08165;Name=E3V42_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08165 SOQV01000064.1 Protein Homology CDS 4094 4351 . + 0 ID=cds-TMR83268.1;Parent=gene-E3V42_08165;Dbxref=NCBI_GP:TMR83268.1;Name=TMR83268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608473.1;locus_tag=E3V42_08165;product=hypothetical protein;protein_id=TMR83268.1;transl_table=11 SOQV01000064.1 Genbank gene 4351 4698 . + . ID=gene-E3V42_08170;Name=E3V42_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08170 SOQV01000064.1 Protein Homology CDS 4351 4698 . + 0 ID=cds-TMR83269.1;Parent=gene-E3V42_08170;Dbxref=NCBI_GP:TMR83269.1;Name=TMR83269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973630.1;locus_tag=E3V42_08170;product=hypothetical protein;protein_id=TMR83269.1;transl_table=11 SOQV01000064.1 Genbank gene 4964 5143 . + . ID=gene-E3V42_08175;Name=E3V42_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08175 SOQV01000064.1 Protein Homology CDS 4964 5143 . + 0 ID=cds-TMR83270.1;Parent=gene-E3V42_08175;Dbxref=NCBI_GP:TMR83270.1;Name=TMR83270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613911.1;locus_tag=E3V42_08175;product=hypothetical protein;protein_id=TMR83270.1;transl_table=11 SOQV01000064.1 Genbank gene 5140 5889 . + . ID=gene-E3V42_08180;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=E3V42_08180 SOQV01000064.1 Protein Homology CDS 5140 5889 . + 0 ID=cds-TMR83271.1;Parent=gene-E3V42_08180;Dbxref=NCBI_GP:TMR83271.1;Name=TMR83271.1;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866809.1;locus_tag=E3V42_08180;product=phage recombination protein Bet;protein_id=TMR83271.1;transl_table=11 SOQV01000064.1 Genbank gene 5891 6916 . + . ID=gene-E3V42_08185;Name=E3V42_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08185 SOQV01000064.1 Protein Homology CDS 5891 6916 . + 0 ID=cds-TMR83272.1;Parent=gene-E3V42_08185;Dbxref=NCBI_GP:TMR83272.1;Name=TMR83272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862968.1;locus_tag=E3V42_08185;product=DUF1351 domain-containing protein;protein_id=TMR83272.1;transl_table=11 SOQV01000064.1 Genbank gene 7134 7496 . + . ID=gene-E3V42_08190;Name=E3V42_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08190 SOQV01000064.1 Protein Homology CDS 7134 7496 . + 0 ID=cds-TMR83273.1;Parent=gene-E3V42_08190;Dbxref=NCBI_GP:TMR83273.1;Name=TMR83273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284860.1;locus_tag=E3V42_08190;product=XRE family transcriptional regulator;protein_id=TMR83273.1;transl_table=11 SOQV01000064.1 Genbank gene 7474 7899 . + . ID=gene-E3V42_08195;Name=E3V42_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08195 SOQV01000064.1 Protein Homology CDS 7474 7899 . + 0 ID=cds-TMR83274.1;Parent=gene-E3V42_08195;Dbxref=NCBI_GP:TMR83274.1;Name=TMR83274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158043.1;locus_tag=E3V42_08195;product=hypothetical protein;protein_id=TMR83274.1;transl_table=11 SOQV01000064.1 Genbank gene 7915 8082 . + . ID=gene-E3V42_08200;Name=E3V42_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08200 SOQV01000064.1 Protein Homology CDS 7915 8082 . + 0 ID=cds-TMR83275.1;Parent=gene-E3V42_08200;Dbxref=NCBI_GP:TMR83275.1;Name=TMR83275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=E3V42_08200;product=hypothetical protein;protein_id=TMR83275.1;transl_table=11 ##sequence-region SOQV01000065.1 1 1246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000065.1 Genbank region 1 1246 . + . ID=SOQV01000065.1:1..1246;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000065.1 Genbank gene 1 164 . + . ID=gene-E3V42_08205;Name=E3V42_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08205;partial=true;start_range=.,1 SOQV01000065.1 Protein Homology CDS 1 164 . + 2 ID=cds-TMR83255.1;Parent=gene-E3V42_08205;Dbxref=NCBI_GP:TMR83255.1;Name=TMR83255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854424.1;locus_tag=E3V42_08205;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR83255.1;start_range=.,1;transl_table=11 SOQV01000065.1 Genbank gene 219 425 . + . ID=gene-E3V42_08210;Name=E3V42_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08210 SOQV01000065.1 Protein Homology CDS 219 425 . + 0 ID=cds-TMR83256.1;Parent=gene-E3V42_08210;Dbxref=NCBI_GP:TMR83256.1;Name=TMR83256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=E3V42_08210;product=transposase;protein_id=TMR83256.1;transl_table=11 SOQV01000065.1 Genbank gene 328 1246 . + . ID=gene-E3V42_08215;Name=E3V42_08215;end_range=1246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08215;partial=true SOQV01000065.1 Protein Homology CDS 328 1246 . + 0 ID=cds-TMR83257.1;Parent=gene-E3V42_08215;Dbxref=NCBI_GP:TMR83257.1;Name=TMR83257.1;end_range=1246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941577.1;locus_tag=E3V42_08215;partial=true;product=IS66 family transposase;protein_id=TMR83257.1;transl_table=11 ##sequence-region SOQV01000066.1 1 17859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000066.1 Genbank region 1 17859 . + . ID=SOQV01000066.1:1..17859;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000066.1 Genbank gene 15 551 . + . ID=gene-E3V42_08220;Name=E3V42_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08220 SOQV01000066.1 Protein Homology CDS 15 551 . + 0 ID=cds-TMR83236.1;Parent=gene-E3V42_08220;Dbxref=NCBI_GP:TMR83236.1;Name=TMR83236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_08220;product=transposase;protein_id=TMR83236.1;transl_table=11 SOQV01000066.1 Genbank gene 843 1979 . + . ID=gene-E3V42_08225;Name=lctO;gbkey=Gene;gene=lctO;gene_biotype=protein_coding;locus_tag=E3V42_08225 SOQV01000066.1 Protein Homology CDS 843 1979 . + 0 ID=cds-TMR83237.1;Parent=gene-E3V42_08225;Dbxref=NCBI_GP:TMR83237.1;Name=TMR83237.1;gbkey=CDS;gene=lctO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358221.1;locus_tag=E3V42_08225;product=L-lactate oxidase;protein_id=TMR83237.1;transl_table=11 SOQV01000066.1 cmsearch riboswitch 2128 2216 . + . ID=id-SOQV01000066.1:2128..2216;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000066.1 Genbank gene 2433 3101 . + . ID=gene-E3V42_08230;Name=E3V42_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08230 SOQV01000066.1 Protein Homology CDS 2433 3101 . + 0 ID=cds-TMR83238.1;Parent=gene-E3V42_08230;Dbxref=NCBI_GP:TMR83238.1;Name=TMR83238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405341.1;locus_tag=E3V42_08230;product=TenA family protein;protein_id=TMR83238.1;transl_table=11 SOQV01000066.1 Genbank gene 3210 4013 . + . ID=gene-E3V42_08235;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=E3V42_08235 SOQV01000066.1 Protein Homology CDS 3210 4013 . + 0 ID=cds-TMR83239.1;Parent=gene-E3V42_08235;Dbxref=NCBI_GP:TMR83239.1;Name=TMR83239.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358223.1;locus_tag=E3V42_08235;product=hydroxyethylthiazole kinase;protein_id=TMR83239.1;transl_table=11 SOQV01000066.1 Genbank gene 4015 4644 . + . ID=gene-E3V42_08240;Name=E3V42_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08240 SOQV01000066.1 Protein Homology CDS 4015 4644 . + 0 ID=cds-TMR83240.1;Parent=gene-E3V42_08240;Dbxref=NCBI_GP:TMR83240.1;Name=TMR83240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358224.1;locus_tag=E3V42_08240;product=thiamine phosphate synthase;protein_id=TMR83240.1;transl_table=11 SOQV01000066.1 cmsearch riboswitch 4760 4848 . + . ID=id-SOQV01000066.1:4760..4848;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000066.1 Genbank gene 5076 5669 . + . ID=gene-E3V42_08245;Name=E3V42_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08245 SOQV01000066.1 Protein Homology CDS 5076 5669 . + 0 ID=cds-TMR83241.1;Parent=gene-E3V42_08245;Dbxref=NCBI_GP:TMR83241.1;Name=TMR83241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358225.1;locus_tag=E3V42_08245;product=cobalt ABC transporter permease;protein_id=TMR83241.1;transl_table=11 SOQV01000066.1 Genbank gene 5670 7055 . + . ID=gene-E3V42_08250;Name=E3V42_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08250 SOQV01000066.1 Protein Homology CDS 5670 7055 . + 0 ID=cds-TMR83242.1;Parent=gene-E3V42_08250;Dbxref=NCBI_GP:TMR83242.1;Name=TMR83242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358226.1;locus_tag=E3V42_08250;product=ABC transporter ATP-binding protein;protein_id=TMR83242.1;transl_table=11 SOQV01000066.1 Genbank gene 7057 7707 . + . ID=gene-E3V42_08255;Name=E3V42_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08255 SOQV01000066.1 Protein Homology CDS 7057 7707 . + 0 ID=cds-TMR83243.1;Parent=gene-E3V42_08255;Dbxref=NCBI_GP:TMR83243.1;Name=TMR83243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358227.1;locus_tag=E3V42_08255;product=cobalt ABC transporter permease;protein_id=TMR83243.1;transl_table=11 SOQV01000066.1 Genbank gene 7718 8407 . + . ID=gene-E3V42_08260;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=E3V42_08260 SOQV01000066.1 Protein Homology CDS 7718 8407 . + 0 ID=cds-TMR83244.1;Parent=gene-E3V42_08260;Dbxref=NCBI_GP:TMR83244.1;Name=TMR83244.1;gbkey=CDS;gene=tenA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358228.1;locus_tag=E3V42_08260;product=thiaminase II;protein_id=TMR83244.1;transl_table=11 SOQV01000066.1 Genbank gene 8413 8937 . + . ID=gene-E3V42_08265;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=E3V42_08265 SOQV01000066.1 Protein Homology CDS 8413 8937 . + 0 ID=cds-TMR83245.1;Parent=gene-E3V42_08265;Dbxref=NCBI_GP:TMR83245.1;Name=TMR83245.1;gbkey=CDS;gene=thiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358229.1;locus_tag=E3V42_08265;product=energy coupling factor transporter S component ThiW;protein_id=TMR83245.1;transl_table=11 SOQV01000066.1 Genbank gene 8937 9740 . + . ID=gene-E3V42_08270;Name=E3V42_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08270 SOQV01000066.1 Protein Homology CDS 8937 9740 . + 0 ID=cds-TMR83246.1;Parent=gene-E3V42_08270;Dbxref=NCBI_GP:TMR83246.1;Name=TMR83246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358230.1;locus_tag=E3V42_08270;product=hydroxyethylthiazole kinase;protein_id=TMR83246.1;transl_table=11 SOQV01000066.1 Genbank gene 9733 10365 . + . ID=gene-E3V42_08275;Name=E3V42_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08275 SOQV01000066.1 Protein Homology CDS 9733 10365 . + 0 ID=cds-TMR83247.1;Parent=gene-E3V42_08275;Dbxref=NCBI_GP:TMR83247.1;Name=TMR83247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358231.1;locus_tag=E3V42_08275;product=thiamine phosphate synthase;protein_id=TMR83247.1;transl_table=11 SOQV01000066.1 Genbank gene 10574 11365 . - . ID=gene-E3V42_08280;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=E3V42_08280 SOQV01000066.1 Protein Homology CDS 10574 11365 . - 0 ID=cds-TMR83248.1;Parent=gene-E3V42_08280;Dbxref=NCBI_GP:TMR83248.1;Name=TMR83248.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358232.1;locus_tag=E3V42_08280;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TMR83248.1;transl_table=11 SOQV01000066.1 cmsearch riboswitch 11449 11547 . - . ID=id-SOQV01000066.1:11449..11547;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000066.1 Genbank gene 11731 12126 . + . ID=gene-E3V42_08285;Name=E3V42_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08285 SOQV01000066.1 Protein Homology CDS 11731 12126 . + 0 ID=cds-TMR83254.1;Parent=gene-E3V42_08285;Dbxref=NCBI_GP:TMR83254.1;Name=TMR83254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446536.1;locus_tag=E3V42_08285;product=CopY/TcrY family copper transport repressor;protein_id=TMR83254.1;transl_table=11 SOQV01000066.1 Genbank gene 12137 12508 . + . ID=gene-E3V42_08290;Name=E3V42_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08290 SOQV01000066.1 Protein Homology CDS 12137 12508 . + 0 ID=cds-TMR83249.1;Parent=gene-E3V42_08290;Dbxref=NCBI_GP:TMR83249.1;Name=TMR83249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446535.1;locus_tag=E3V42_08290;product=ATPase;protein_id=TMR83249.1;transl_table=11 SOQV01000066.1 Genbank gene 12518 14761 . + . ID=gene-E3V42_08295;Name=E3V42_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08295 SOQV01000066.1 Protein Homology CDS 12518 14761 . + 0 ID=cds-TMR83250.1;Parent=gene-E3V42_08295;Dbxref=NCBI_GP:TMR83250.1;Name=TMR83250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446534.1;locus_tag=E3V42_08295;product=heavy metal translocating P-type ATPase;protein_id=TMR83250.1;transl_table=11 SOQV01000066.1 Genbank gene 14771 14965 . - . ID=gene-E3V42_08300;Name=E3V42_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08300 SOQV01000066.1 Protein Homology CDS 14771 14965 . - 0 ID=cds-TMR83251.1;Parent=gene-E3V42_08300;Dbxref=NCBI_GP:TMR83251.1;Name=TMR83251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843838.1;locus_tag=E3V42_08300;product=hypothetical protein;protein_id=TMR83251.1;transl_table=11 SOQV01000066.1 Genbank gene 14967 16742 . + . ID=gene-E3V42_08305;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=E3V42_08305 SOQV01000066.1 Protein Homology CDS 14967 16742 . + 0 ID=cds-TMR83252.1;Parent=gene-E3V42_08305;Dbxref=NCBI_GP:TMR83252.1;Name=TMR83252.1;gbkey=CDS;gene=spxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446533.1;locus_tag=E3V42_08305;product=pyruvate oxidase;protein_id=TMR83252.1;transl_table=11 SOQV01000066.1 Genbank gene 16853 17200 . + . ID=gene-E3V42_08310;Name=E3V42_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08310 SOQV01000066.1 Protein Homology CDS 16853 17200 . + 0 ID=cds-TMR83253.1;Parent=gene-E3V42_08310;Dbxref=NCBI_GP:TMR83253.1;Name=TMR83253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446532.1;locus_tag=E3V42_08310;product=VOC family protein;protein_id=TMR83253.1;transl_table=11 SOQV01000066.1 Genbank pseudogene 17319 17859 . - . ID=gene-E3V42_08315;Name=E3V42_08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08315;pseudo=true SOQV01000066.1 Protein Homology CDS 17319 17859 . - 1 ID=cds-E3V42_08315;Parent=gene-E3V42_08315;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_08315;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region SOQV01000067.1 1 595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000067.1 Genbank region 1 595 . + . ID=SOQV01000067.1:1..595;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000067.1 Genbank gene 224 295 . + . ID=gene-E3V42_08320;Name=E3V42_08320;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08320 SOQV01000067.1 tRNAscan-SE tRNA 224 295 . + . ID=rna-E3V42_08320;Parent=gene-E3V42_08320;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08320;product=tRNA-Glu SOQV01000067.1 tRNAscan-SE exon 224 295 . + . ID=exon-E3V42_08320-1;Parent=rna-E3V42_08320;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08320;product=tRNA-Glu SOQV01000067.1 Genbank gene 536 595 . + . ID=gene-E3V42_08325;Name=E3V42_08325;end_range=595,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V42_08325;partial=true SOQV01000067.1 Genbank rRNA 536 595 . + . ID=rna-E3V42_08325;Parent=gene-E3V42_08325;end_range=595,.;gbkey=rRNA;locus_tag=E3V42_08325;partial=true;product=16S ribosomal RNA SOQV01000067.1 Genbank exon 536 595 . + . ID=exon-E3V42_08325-1;Parent=rna-E3V42_08325;end_range=595,.;gbkey=rRNA;locus_tag=E3V42_08325;partial=true;product=16S ribosomal RNA ##sequence-region SOQV01000068.1 1 19386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000068.1 Genbank region 1 19386 . + . ID=SOQV01000068.1:1..19386;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000068.1 Genbank gene 259 975 . + . ID=gene-E3V42_08330;Name=E3V42_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08330 SOQV01000068.1 Protein Homology CDS 259 975 . + 0 ID=cds-TMR83196.1;Parent=gene-E3V42_08330;Dbxref=NCBI_GP:TMR83196.1;Name=TMR83196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088325.1;locus_tag=E3V42_08330;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TMR83196.1;transl_table=11 SOQV01000068.1 Genbank gene 991 1077 . + . ID=gene-E3V42_08335;Name=E3V42_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08335 SOQV01000068.1 Protein Homology CDS 991 1077 . + 0 ID=cds-TMR83218.1;Parent=gene-E3V42_08335;Dbxref=NCBI_GP:TMR83218.1;Name=TMR83218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809295.1;locus_tag=E3V42_08335;product=single-stranded DNA-binding protein;protein_id=TMR83218.1;transl_table=11 SOQV01000068.1 Genbank gene 1133 1603 . + . ID=gene-E3V42_08340;Name=E3V42_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08340 SOQV01000068.1 Protein Homology CDS 1133 1603 . + 0 ID=cds-TMR83197.1;Parent=gene-E3V42_08340;Dbxref=NCBI_GP:TMR83197.1;Name=TMR83197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517879.1;locus_tag=E3V42_08340;product=MarR family transcriptional regulator;protein_id=TMR83197.1;transl_table=11 SOQV01000068.1 Genbank gene 1578 3347 . + . ID=gene-E3V42_08345;Name=E3V42_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08345 SOQV01000068.1 Protein Homology CDS 1578 3347 . + 0 ID=cds-TMR83198.1;Parent=gene-E3V42_08345;Dbxref=NCBI_GP:TMR83198.1;Name=TMR83198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446935.1;locus_tag=E3V42_08345;product=ABC transporter ATP-binding protein;protein_id=TMR83198.1;transl_table=11 SOQV01000068.1 Genbank gene 3337 5097 . + . ID=gene-E3V42_08350;Name=E3V42_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08350 SOQV01000068.1 Protein Homology CDS 3337 5097 . + 0 ID=cds-TMR83199.1;Parent=gene-E3V42_08350;Dbxref=NCBI_GP:TMR83199.1;Name=TMR83199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446934.1;locus_tag=E3V42_08350;product=ABC transporter ATP-binding protein;protein_id=TMR83199.1;transl_table=11 SOQV01000068.1 Genbank gene 5181 5696 . + . ID=gene-E3V42_08355;Name=E3V42_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08355 SOQV01000068.1 Protein Homology CDS 5181 5696 . + 0 ID=cds-TMR83200.1;Parent=gene-E3V42_08355;Dbxref=NCBI_GP:TMR83200.1;Name=TMR83200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446933.1;locus_tag=E3V42_08355;product=phosphatase PAP2 family protein;protein_id=TMR83200.1;transl_table=11 SOQV01000068.1 Genbank pseudogene 5742 5810 . - . ID=gene-E3V42_08360;Name=E3V42_08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08360;pseudo=true SOQV01000068.1 Protein Homology CDS 5742 5810 . - 0 ID=cds-E3V42_08360;Parent=gene-E3V42_08360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_08360;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000068.1 Genbank gene 5916 6362 . + . ID=gene-E3V42_08365;Name=E3V42_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08365 SOQV01000068.1 Protein Homology CDS 5916 6362 . + 0 ID=cds-TMR83201.1;Parent=gene-E3V42_08365;Dbxref=NCBI_GP:TMR83201.1;Name=TMR83201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446932.1;locus_tag=E3V42_08365;product=response regulator transcription factor;protein_id=TMR83201.1;transl_table=11 SOQV01000068.1 Genbank gene 6367 7041 . + . ID=gene-E3V42_08370;Name=E3V42_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08370 SOQV01000068.1 Protein Homology CDS 6367 7041 . + 0 ID=cds-TMR83202.1;Parent=gene-E3V42_08370;Dbxref=NCBI_GP:TMR83202.1;Name=TMR83202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446931.1;locus_tag=E3V42_08370;product=hypothetical protein;protein_id=TMR83202.1;transl_table=11 SOQV01000068.1 Genbank gene 7293 7481 . + . ID=gene-E3V42_08375;Name=E3V42_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08375 SOQV01000068.1 Protein Homology CDS 7293 7481 . + 0 ID=cds-TMR83203.1;Parent=gene-E3V42_08375;Dbxref=NCBI_GP:TMR83203.1;Name=TMR83203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647592.1;locus_tag=E3V42_08375;product=choline-binding protein A;protein_id=TMR83203.1;transl_table=11 SOQV01000068.1 Genbank gene 7719 8018 . + . ID=gene-E3V42_08380;Name=E3V42_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08380 SOQV01000068.1 Protein Homology CDS 7719 8018 . + 0 ID=cds-TMR83204.1;Parent=gene-E3V42_08380;Dbxref=NCBI_GP:TMR83204.1;Name=TMR83204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359320.1;locus_tag=E3V42_08380;product=DUF4651 domain-containing protein;protein_id=TMR83204.1;transl_table=11 SOQV01000068.1 Genbank gene 8015 8332 . + . ID=gene-E3V42_08385;Name=E3V42_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08385 SOQV01000068.1 Protein Homology CDS 8015 8332 . + 0 ID=cds-TMR83205.1;Parent=gene-E3V42_08385;Dbxref=NCBI_GP:TMR83205.1;Name=TMR83205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359319.1;locus_tag=E3V42_08385;product=thioredoxin;protein_id=TMR83205.1;transl_table=11 SOQV01000068.1 Genbank gene 8348 8974 . + . ID=gene-E3V42_08390;Name=E3V42_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08390 SOQV01000068.1 Protein Homology CDS 8348 8974 . + 0 ID=cds-TMR83206.1;Parent=gene-E3V42_08390;Dbxref=NCBI_GP:TMR83206.1;Name=TMR83206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359318.1;locus_tag=E3V42_08390;product=DUF4479 domain-containing protein;protein_id=TMR83206.1;transl_table=11 SOQV01000068.1 Genbank gene 9016 9777 . + . ID=gene-E3V42_08395;Name=E3V42_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08395 SOQV01000068.1 Protein Homology CDS 9016 9777 . + 0 ID=cds-TMR83207.1;Parent=gene-E3V42_08395;Dbxref=NCBI_GP:TMR83207.1;Name=TMR83207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107790.1;locus_tag=E3V42_08395;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=TMR83207.1;transl_table=11 SOQV01000068.1 Genbank gene 9854 10249 . + . ID=gene-E3V42_08400;Name=E3V42_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08400 SOQV01000068.1 Protein Homology CDS 9854 10249 . + 0 ID=cds-TMR83208.1;Parent=gene-E3V42_08400;Dbxref=NCBI_GP:TMR83208.1;Name=TMR83208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359316.1;locus_tag=E3V42_08400;product=single-stranded DNA-binding protein;protein_id=TMR83208.1;transl_table=11 SOQV01000068.1 Genbank gene 10405 10689 . + . ID=gene-E3V42_08405;Name=E3V42_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08405 SOQV01000068.1 Protein Homology CDS 10405 10689 . + 0 ID=cds-TMR83209.1;Parent=gene-E3V42_08405;Dbxref=NCBI_GP:TMR83209.1;Name=TMR83209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359315.1;locus_tag=E3V42_08405;product=co-chaperone GroES;protein_id=TMR83209.1;transl_table=11 SOQV01000068.1 Genbank gene 10705 12327 . + . ID=gene-E3V42_08410;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=E3V42_08410 SOQV01000068.1 Protein Homology CDS 10705 12327 . + 0 ID=cds-TMR83210.1;Parent=gene-E3V42_08410;Dbxref=NCBI_GP:TMR83210.1;Name=TMR83210.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591590.1;locus_tag=E3V42_08410;product=chaperonin GroEL;protein_id=TMR83210.1;transl_table=11 SOQV01000068.1 Genbank gene 12465 13220 . + . ID=gene-E3V42_08415;Name=E3V42_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08415 SOQV01000068.1 Protein Homology CDS 12465 13220 . + 0 ID=cds-TMR83211.1;Parent=gene-E3V42_08415;Dbxref=NCBI_GP:TMR83211.1;Name=TMR83211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567550.1;locus_tag=E3V42_08415;product=epoxyqueuosine reductase QueH;protein_id=TMR83211.1;transl_table=11 SOQV01000068.1 Genbank gene 13666 14439 . + . ID=gene-E3V42_08420;Name=E3V42_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08420 SOQV01000068.1 Protein Homology CDS 13666 14439 . + 0 ID=cds-TMR83212.1;Parent=gene-E3V42_08420;Dbxref=NCBI_GP:TMR83212.1;Name=TMR83212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445624.1;locus_tag=E3V42_08420;product=class I SAM-dependent methyltransferase;protein_id=TMR83212.1;transl_table=11 SOQV01000068.1 Genbank gene 14452 15309 . + . ID=gene-E3V42_08425;Name=E3V42_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08425 SOQV01000068.1 Protein Homology CDS 14452 15309 . + 0 ID=cds-TMR83213.1;Parent=gene-E3V42_08425;Dbxref=NCBI_GP:TMR83213.1;Name=TMR83213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445625.1;locus_tag=E3V42_08425;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR83213.1;transl_table=11 SOQV01000068.1 Genbank gene 15502 15735 . + . ID=gene-E3V42_08430;Name=E3V42_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08430 SOQV01000068.1 Protein Homology CDS 15502 15735 . + 0 ID=cds-TMR83214.1;Parent=gene-E3V42_08430;Dbxref=NCBI_GP:TMR83214.1;Name=TMR83214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767835.1;locus_tag=E3V42_08430;product=hypothetical protein;protein_id=TMR83214.1;transl_table=11 SOQV01000068.1 Genbank gene 15656 16189 . - . ID=gene-E3V42_08435;Name=E3V42_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08435 SOQV01000068.1 Protein Homology CDS 15656 16189 . - 0 ID=cds-TMR83215.1;Parent=gene-E3V42_08435;Dbxref=NCBI_GP:TMR83215.1;Name=TMR83215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=E3V42_08435;product=DUF402 domain-containing protein;protein_id=TMR83215.1;transl_table=11 SOQV01000068.1 Genbank gene 16278 17054 . - . ID=gene-E3V42_08440;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=E3V42_08440 SOQV01000068.1 Protein Homology CDS 16278 17054 . - 0 ID=cds-TMR83216.1;Parent=gene-E3V42_08440;Dbxref=NCBI_GP:TMR83216.1;Name=TMR83216.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359310.2;locus_tag=E3V42_08440;product=recombination regulator RecX;protein_id=TMR83216.1;transl_table=11 SOQV01000068.1 Genbank gene 17064 17840 . - . ID=gene-E3V42_08445;Name=E3V42_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08445 SOQV01000068.1 Protein Homology CDS 17064 17840 . - 0 ID=cds-TMR83219.1;Parent=gene-E3V42_08445;Dbxref=NCBI_GP:TMR83219.1;Name=TMR83219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086342.1;locus_tag=E3V42_08445;product=aminoglycoside 3'-phosphotransferase;protein_id=TMR83219.1;transl_table=11 SOQV01000068.1 Genbank gene 17897 19252 . + . ID=gene-E3V42_08450;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=E3V42_08450 SOQV01000068.1 Protein Homology CDS 17897 19252 . + 0 ID=cds-TMR83217.1;Parent=gene-E3V42_08450;Dbxref=NCBI_GP:TMR83217.1;Name=TMR83217.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050288.1;locus_tag=E3V42_08450;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TMR83217.1;transl_table=11 ##sequence-region SOQV01000069.1 1 1157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000069.1 Genbank region 1 1157 . + . ID=SOQV01000069.1:1..1157;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000069.1 Genbank pseudogene 62 244 . - . ID=gene-E3V42_08455;Name=E3V42_08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08455;pseudo=true SOQV01000069.1 Protein Homology CDS 62 244 . - 0 ID=cds-E3V42_08455;Parent=gene-E3V42_08455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284773.1;locus_tag=E3V42_08455;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000069.1 Genbank gene 226 1157 . - . ID=gene-E3V42_08460;Name=E3V42_08460;end_range=1157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08460;partial=true SOQV01000069.1 Protein Homology CDS 226 1157 . - 2 ID=cds-TMR83190.1;Parent=gene-E3V42_08460;Dbxref=NCBI_GP:TMR83190.1;Name=TMR83190.1;end_range=1157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398391.1;locus_tag=E3V42_08460;partial=true;product=ISNCY family transposase;protein_id=TMR83190.1;transl_table=11 ##sequence-region SOQV01000007.1 1 4567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000007.1 Genbank region 1 4567 . + . ID=SOQV01000007.1:1..4567;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000007.1 Genbank pseudogene 1 307 . + . ID=gene-E3V42_00580;Name=E3V42_00580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00580;pseudo=true SOQV01000007.1 Protein Homology CDS 1 307 . + 1 ID=cds-E3V42_00580;Parent=gene-E3V42_00580;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093621.1;locus_tag=E3V42_00580;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 SOQV01000007.1 Genbank gene 375 653 . - . ID=gene-E3V42_00585;Name=E3V42_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00585 SOQV01000007.1 Protein Homology CDS 375 653 . - 0 ID=cds-TMR85509.1;Parent=gene-E3V42_00585;Dbxref=NCBI_GP:TMR85509.1;Name=TMR85509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843943.1;locus_tag=E3V42_00585;product=competence protein ComA;protein_id=TMR85509.1;transl_table=11 SOQV01000007.1 Genbank gene 794 1426 . - . ID=gene-E3V42_00590;Name=E3V42_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00590 SOQV01000007.1 Protein Homology CDS 794 1426 . - 0 ID=cds-TMR85510.1;Parent=gene-E3V42_00590;Dbxref=NCBI_GP:TMR85510.1;Name=TMR85510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359365.1;locus_tag=E3V42_00590;product=ABC transporter ATP-binding protein;protein_id=TMR85510.1;transl_table=11 SOQV01000007.1 Genbank gene 1428 3443 . - . ID=gene-E3V42_00595;Name=E3V42_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00595 SOQV01000007.1 Protein Homology CDS 1428 3443 . - 0 ID=cds-TMR85511.1;Parent=gene-E3V42_00595;Dbxref=NCBI_GP:TMR85511.1;Name=TMR85511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677978.1;locus_tag=E3V42_00595;product=bacteriocin-associated integral membrane family protein;protein_id=TMR85511.1;transl_table=11 SOQV01000007.1 Genbank gene 3546 3842 . - . ID=gene-E3V42_00600;Name=E3V42_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00600 SOQV01000007.1 Protein Homology CDS 3546 3842 . - 0 ID=cds-TMR85512.1;Parent=gene-E3V42_00600;Dbxref=NCBI_GP:TMR85512.1;Name=TMR85512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911560.1;locus_tag=E3V42_00600;product=lactococcin 972 family bacteriocin;protein_id=TMR85512.1;transl_table=11 ##sequence-region SOQV01000070.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000070.1 Genbank region 1 562 . + . ID=SOQV01000070.1:1..562;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000070.1 Genbank pseudogene 1 562 . - . ID=gene-E3V42_08465;Name=E3V42_08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08465;pseudo=true SOQV01000070.1 Protein Homology CDS 1 562 . - 1 ID=cds-E3V42_08465;Parent=gene-E3V42_08465;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=E3V42_08465;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000071.1 1 24671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000071.1 Genbank region 1 24671 . + . ID=SOQV01000071.1:1..24671;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000071.1 Genbank gene 436 1335 . - . ID=gene-E3V42_08470;Name=E3V42_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08470 SOQV01000071.1 Protein Homology CDS 436 1335 . - 0 ID=cds-TMR83160.1;Parent=gene-E3V42_08470;Dbxref=NCBI_GP:TMR83160.1;Name=TMR83160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359395.1;locus_tag=E3V42_08470;product=XRE family transcriptional regulator;protein_id=TMR83160.1;transl_table=11 SOQV01000071.1 Genbank gene 1407 1967 . - . ID=gene-E3V42_08475;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=E3V42_08475 SOQV01000071.1 Protein Homology CDS 1407 1967 . - 0 ID=cds-TMR83161.1;Parent=gene-E3V42_08475;Dbxref=NCBI_GP:TMR83161.1;Name=TMR83161.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359396.1;locus_tag=E3V42_08475;product=ribonuclease M5;protein_id=TMR83161.1;transl_table=11 SOQV01000071.1 Genbank gene 1967 2740 . - . ID=gene-E3V42_08480;Name=E3V42_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08480 SOQV01000071.1 Protein Homology CDS 1967 2740 . - 0 ID=cds-TMR83162.1;Parent=gene-E3V42_08480;Dbxref=NCBI_GP:TMR83162.1;Name=TMR83162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359397.1;locus_tag=E3V42_08480;product=TatD family deoxyribonuclease;protein_id=TMR83162.1;transl_table=11 SOQV01000071.1 Genbank pseudogene 2719 2913 . + . ID=gene-E3V42_08485;Name=E3V42_08485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08485;pseudo=true SOQV01000071.1 Protein Homology CDS 2719 2913 . + 0 ID=cds-E3V42_08485;Parent=gene-E3V42_08485;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844424.1;locus_tag=E3V42_08485;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000071.1 Genbank pseudogene 3047 3181 . - . ID=gene-E3V42_08490;Name=E3V42_08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08490;pseudo=true SOQV01000071.1 Protein Homology CDS 3047 3181 . - 0 ID=cds-E3V42_08490;Parent=gene-E3V42_08490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359398.1;locus_tag=E3V42_08490;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11 SOQV01000071.1 Genbank gene 3385 6528 . - . ID=gene-E3V42_08495;Name=E3V42_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08495 SOQV01000071.1 Genbank CDS 3385 6528 . - 0 ID=cds-TMR83179.1;Parent=gene-E3V42_08495;Dbxref=NCBI_GP:TMR83179.1;Name=TMR83179.1;gbkey=CDS;locus_tag=E3V42_08495;product=cell wall-binding protein;protein_id=TMR83179.1;transl_table=11 SOQV01000071.1 Genbank gene 7056 11414 . - . ID=gene-E3V42_08500;Name=E3V42_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08500 SOQV01000071.1 Protein Homology CDS 7056 11414 . - 0 ID=cds-TMR83163.1;Parent=gene-E3V42_08500;Dbxref=NCBI_GP:TMR83163.1;Name=TMR83163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19%2CHMM:PF08428.8;locus_tag=E3V42_08500;product=YSIRK-type signal peptide-containing protein;protein_id=TMR83163.1;transl_table=11 SOQV01000071.1 Genbank gene 12166 12300 . - . ID=gene-E3V42_08505;Name=E3V42_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08505 SOQV01000071.1 Protein Homology CDS 12166 12300 . - 0 ID=cds-TMR83164.1;Parent=gene-E3V42_08505;Dbxref=NCBI_GP:TMR83164.1;Name=TMR83164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=E3V42_08505;product=50S ribosomal protein L34;protein_id=TMR83164.1;transl_table=11 SOQV01000071.1 Genbank gene 12445 13659 . - . ID=gene-E3V42_08510;Name=E3V42_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08510 SOQV01000071.1 Protein Homology CDS 12445 13659 . - 0 ID=cds-TMR83165.1;Parent=gene-E3V42_08510;Dbxref=NCBI_GP:TMR83165.1;Name=TMR83165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445429.1;locus_tag=E3V42_08510;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TMR83165.1;transl_table=11 SOQV01000071.1 Genbank gene 13803 14360 . - . ID=gene-E3V42_08515;Name=E3V42_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08515 SOQV01000071.1 Protein Homology CDS 13803 14360 . - 0 ID=cds-TMR83166.1;Parent=gene-E3V42_08515;Dbxref=NCBI_GP:TMR83166.1;Name=TMR83166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203814.1;locus_tag=E3V42_08515;product=hypothetical protein;protein_id=TMR83166.1;transl_table=11 SOQV01000071.1 Genbank gene 14381 14680 . - . ID=gene-E3V42_08520;Name=E3V42_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08520 SOQV01000071.1 Protein Homology CDS 14381 14680 . - 0 ID=cds-TMR83167.1;Parent=gene-E3V42_08520;Dbxref=NCBI_GP:TMR83167.1;Name=TMR83167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445428.1;locus_tag=E3V42_08520;product=hypothetical protein;protein_id=TMR83167.1;transl_table=11 SOQV01000071.1 Genbank gene 14852 15304 . + . ID=gene-E3V42_08525;Name=E3V42_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08525 SOQV01000071.1 Protein Homology CDS 14852 15304 . + 0 ID=cds-TMR83168.1;Parent=gene-E3V42_08525;Dbxref=NCBI_GP:TMR83168.1;Name=TMR83168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445427.1;locus_tag=E3V42_08525;product=universal stress protein;protein_id=TMR83168.1;transl_table=11 SOQV01000071.1 Genbank gene 15377 15499 . - . ID=gene-E3V42_08530;Name=E3V42_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08530 SOQV01000071.1 Protein Homology CDS 15377 15499 . - 0 ID=cds-TMR83169.1;Parent=gene-E3V42_08530;Dbxref=NCBI_GP:TMR83169.1;Name=TMR83169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=E3V42_08530;product=chlorohydrolase;protein_id=TMR83169.1;transl_table=11 SOQV01000071.1 Genbank gene 15496 16887 . - . ID=gene-E3V42_08535;Name=E3V42_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08535 SOQV01000071.1 Protein Homology CDS 15496 16887 . - 0 ID=cds-TMR83170.1;Parent=gene-E3V42_08535;Dbxref=NCBI_GP:TMR83170.1;Name=TMR83170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445426.1;locus_tag=E3V42_08535;product=Cof-type HAD-IIB family hydrolase;protein_id=TMR83170.1;transl_table=11 SOQV01000071.1 Genbank gene 16953 17915 . + . ID=gene-E3V42_08540;Name=E3V42_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08540 SOQV01000071.1 Protein Homology CDS 16953 17915 . + 0 ID=cds-TMR83171.1;Parent=gene-E3V42_08540;Dbxref=NCBI_GP:TMR83171.1;Name=TMR83171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359404.1;locus_tag=E3V42_08540;product=asparaginase;protein_id=TMR83171.1;transl_table=11 SOQV01000071.1 Genbank gene 18220 19230 . - . ID=gene-E3V42_08545;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=E3V42_08545 SOQV01000071.1 Protein Homology CDS 18220 19230 . - 0 ID=cds-TMR83172.1;Parent=gene-E3V42_08545;Dbxref=NCBI_GP:TMR83172.1;Name=TMR83172.1;gbkey=CDS;gene=ccpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445424.1;locus_tag=E3V42_08545;product=catabolite control protein A;protein_id=TMR83172.1;transl_table=11 SOQV01000071.1 Genbank gene 19548 20147 . - . ID=gene-E3V42_08550;Name=E3V42_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08550 SOQV01000071.1 Protein Homology CDS 19548 20147 . - 0 ID=cds-TMR83173.1;Parent=gene-E3V42_08550;Dbxref=NCBI_GP:TMR83173.1;Name=TMR83173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359406.1;locus_tag=E3V42_08550;product=response regulator transcription factor;protein_id=TMR83173.1;transl_table=11 SOQV01000071.1 Genbank gene 20149 21246 . - . ID=gene-E3V42_08555;Name=E3V42_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08555 SOQV01000071.1 Protein Homology CDS 20149 21246 . - 0 ID=cds-TMR83174.1;Parent=gene-E3V42_08555;Dbxref=NCBI_GP:TMR83174.1;Name=TMR83174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359407.1;locus_tag=E3V42_08555;product=sensor histidine kinase;protein_id=TMR83174.1;transl_table=11 SOQV01000071.1 Genbank gene 21246 21983 . - . ID=gene-E3V42_08560;Name=E3V42_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08560 SOQV01000071.1 Protein Homology CDS 21246 21983 . - 0 ID=cds-TMR83175.1;Parent=gene-E3V42_08560;Dbxref=NCBI_GP:TMR83175.1;Name=TMR83175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445397.1;locus_tag=E3V42_08560;product=ABC transporter permease;protein_id=TMR83175.1;transl_table=11 SOQV01000071.1 Genbank gene 21985 22869 . - . ID=gene-E3V42_08565;Name=E3V42_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08565 SOQV01000071.1 Protein Homology CDS 21985 22869 . - 0 ID=cds-TMR83176.1;Parent=gene-E3V42_08565;Dbxref=NCBI_GP:TMR83176.1;Name=TMR83176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445396.1;locus_tag=E3V42_08565;product=ABC transporter ATP-binding protein;protein_id=TMR83176.1;transl_table=11 SOQV01000071.1 Genbank gene 22856 22990 . - . ID=gene-E3V42_08570;Name=E3V42_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08570 SOQV01000071.1 Protein Homology CDS 22856 22990 . - 0 ID=cds-TMR83178.1;Parent=gene-E3V42_08570;Dbxref=NCBI_GP:TMR83178.1;Name=TMR83178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445395.1;locus_tag=E3V42_08570;product=hypothetical protein;protein_id=TMR83178.1;transl_table=11 SOQV01000071.1 Genbank gene 23046 23237 . - . ID=gene-E3V42_08575;Name=E3V42_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08575 SOQV01000071.1 Protein Homology CDS 23046 23237 . - 0 ID=cds-TMR83177.1;Parent=gene-E3V42_08575;Dbxref=NCBI_GP:TMR83177.1;Name=TMR83177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445394.1;locus_tag=E3V42_08575;product=hypothetical protein;protein_id=TMR83177.1;transl_table=11 SOQV01000071.1 Genbank gene 23742 23815 . - . ID=gene-E3V42_08580;Name=E3V42_08580;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08580 SOQV01000071.1 tRNAscan-SE tRNA 23742 23815 . - . ID=rna-E3V42_08580;Parent=gene-E3V42_08580;anticodon=(pos:complement(23779..23781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08580;product=tRNA-Pro SOQV01000071.1 tRNAscan-SE exon 23742 23815 . - . ID=exon-E3V42_08580-1;Parent=rna-E3V42_08580;anticodon=(pos:complement(23779..23781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08580;product=tRNA-Pro SOQV01000071.1 Genbank gene 23831 23904 . - . ID=gene-E3V42_08585;Name=E3V42_08585;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08585 SOQV01000071.1 tRNAscan-SE tRNA 23831 23904 . - . ID=rna-E3V42_08585;Parent=gene-E3V42_08585;anticodon=(pos:complement(23868..23870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08585;product=tRNA-Arg SOQV01000071.1 tRNAscan-SE exon 23831 23904 . - . ID=exon-E3V42_08585-1;Parent=rna-E3V42_08585;anticodon=(pos:complement(23868..23870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08585;product=tRNA-Arg SOQV01000071.1 Genbank gene 23916 24001 . - . ID=gene-E3V42_08590;Name=E3V42_08590;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08590 SOQV01000071.1 tRNAscan-SE tRNA 23916 24001 . - . ID=rna-E3V42_08590;Parent=gene-E3V42_08590;anticodon=(pos:complement(23965..23967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08590;product=tRNA-Leu SOQV01000071.1 tRNAscan-SE exon 23916 24001 . - . ID=exon-E3V42_08590-1;Parent=rna-E3V42_08590;anticodon=(pos:complement(23965..23967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08590;product=tRNA-Leu SOQV01000071.1 Genbank gene 24009 24080 . - . ID=gene-E3V42_08595;Name=E3V42_08595;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08595 SOQV01000071.1 tRNAscan-SE tRNA 24009 24080 . - . ID=rna-E3V42_08595;Parent=gene-E3V42_08595;anticodon=(pos:complement(24046..24048));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08595;product=tRNA-Gly SOQV01000071.1 tRNAscan-SE exon 24009 24080 . - . ID=exon-E3V42_08595-1;Parent=rna-E3V42_08595;anticodon=(pos:complement(24046..24048));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08595;product=tRNA-Gly SOQV01000071.1 Genbank gene 24103 24175 . - . ID=gene-E3V42_08600;Name=E3V42_08600;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08600 SOQV01000071.1 tRNAscan-SE tRNA 24103 24175 . - . ID=rna-E3V42_08600;Parent=gene-E3V42_08600;anticodon=(pos:complement(24140..24142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08600;product=tRNA-Thr SOQV01000071.1 tRNAscan-SE exon 24103 24175 . - . ID=exon-E3V42_08600-1;Parent=rna-E3V42_08600;anticodon=(pos:complement(24140..24142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08600;product=tRNA-Thr SOQV01000071.1 Genbank gene 24194 24275 . - . ID=gene-E3V42_08605;Name=E3V42_08605;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08605 SOQV01000071.1 tRNAscan-SE tRNA 24194 24275 . - . ID=rna-E3V42_08605;Parent=gene-E3V42_08605;anticodon=(pos:complement(24239..24241));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08605;product=tRNA-Leu SOQV01000071.1 tRNAscan-SE exon 24194 24275 . - . ID=exon-E3V42_08605-1;Parent=rna-E3V42_08605;anticodon=(pos:complement(24239..24241));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08605;product=tRNA-Leu SOQV01000071.1 Genbank gene 24281 24353 . - . ID=gene-E3V42_08610;Name=E3V42_08610;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08610 SOQV01000071.1 tRNAscan-SE tRNA 24281 24353 . - . ID=rna-E3V42_08610;Parent=gene-E3V42_08610;anticodon=(pos:complement(24318..24320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08610;product=tRNA-Lys SOQV01000071.1 tRNAscan-SE exon 24281 24353 . - . ID=exon-E3V42_08610-1;Parent=rna-E3V42_08610;anticodon=(pos:complement(24318..24320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08610;product=tRNA-Lys SOQV01000071.1 Genbank gene 24378 24450 . - . ID=gene-E3V42_08615;Name=E3V42_08615;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08615 SOQV01000071.1 tRNAscan-SE tRNA 24378 24450 . - . ID=rna-E3V42_08615;Parent=gene-E3V42_08615;anticodon=(pos:complement(24415..24417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08615;product=tRNA-Asp SOQV01000071.1 tRNAscan-SE exon 24378 24450 . - . ID=exon-E3V42_08615-1;Parent=rna-E3V42_08615;anticodon=(pos:complement(24415..24417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08615;product=tRNA-Asp SOQV01000071.1 Genbank gene 24453 24525 . - . ID=gene-E3V42_08620;Name=E3V42_08620;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08620 SOQV01000071.1 tRNAscan-SE tRNA 24453 24525 . - . ID=rna-E3V42_08620;Parent=gene-E3V42_08620;anticodon=(pos:complement(24490..24492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08620;product=tRNA-Val SOQV01000071.1 tRNAscan-SE exon 24453 24525 . - . ID=exon-E3V42_08620-1;Parent=rna-E3V42_08620;anticodon=(pos:complement(24490..24492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08620;product=tRNA-Val SOQV01000071.1 Genbank gene 24530 24645 . - . ID=gene-E3V42_08625;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V42_08625 SOQV01000071.1 cmsearch rRNA 24530 24645 . - . ID=rna-E3V42_08625;Parent=gene-E3V42_08625;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_08625;product=5S ribosomal RNA SOQV01000071.1 cmsearch exon 24530 24645 . - . ID=exon-E3V42_08625-1;Parent=rna-E3V42_08625;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_08625;product=5S ribosomal RNA ##sequence-region SOQV01000072.1 1 21991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000072.1 Genbank region 1 21991 . + . ID=SOQV01000072.1:1..21991;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000072.1 Genbank gene 209 2482 . + . ID=gene-E3V42_08630;Name=E3V42_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08630 SOQV01000072.1 Protein Homology CDS 209 2482 . + 0 ID=cds-TMR83120.1;Parent=gene-E3V42_08630;Dbxref=NCBI_GP:TMR83120.1;Name=TMR83120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446113.1;locus_tag=E3V42_08630;product=Xaa-Pro dipeptidyl-peptidase;protein_id=TMR83120.1;transl_table=11 SOQV01000072.1 Genbank gene 2499 2969 . + . ID=gene-E3V42_08635;Name=E3V42_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08635 SOQV01000072.1 Protein Homology CDS 2499 2969 . + 0 ID=cds-TMR83121.1;Parent=gene-E3V42_08635;Dbxref=NCBI_GP:TMR83121.1;Name=TMR83121.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358387.1;locus_tag=E3V42_08635;product=arginine repressor;protein_id=TMR83121.1;transl_table=11 SOQV01000072.1 Genbank gene 3727 7077 . - . ID=gene-E3V42_08640;Name=E3V42_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08640 SOQV01000072.1 Protein Homology CDS 3727 7077 . - 0 ID=cds-TMR83122.1;Parent=gene-E3V42_08640;Dbxref=NCBI_GP:TMR83122.1;Name=TMR83122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358386.1;locus_tag=E3V42_08640;product=DEAD/DEAH box helicase;protein_id=TMR83122.1;transl_table=11 SOQV01000072.1 Genbank gene 7107 8213 . - . ID=gene-E3V42_08645;Name=E3V42_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08645 SOQV01000072.1 Protein Homology CDS 7107 8213 . - 0 ID=cds-TMR83123.1;Parent=gene-E3V42_08645;Dbxref=NCBI_GP:TMR83123.1;Name=TMR83123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756122.1;locus_tag=E3V42_08645;product=restriction endonuclease subunit S;protein_id=TMR83123.1;transl_table=11 SOQV01000072.1 Genbank gene 8247 9212 . - . ID=gene-E3V42_08650;Name=E3V42_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08650 SOQV01000072.1 Protein Homology CDS 8247 9212 . - 0 ID=cds-TMR83124.1;Parent=gene-E3V42_08650;Dbxref=NCBI_GP:TMR83124.1;Name=TMR83124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444451.1;locus_tag=E3V42_08650;product=integrase;protein_id=TMR83124.1;transl_table=11 SOQV01000072.1 Genbank gene 9330 9743 . - . ID=gene-E3V42_08655;Name=E3V42_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08655 SOQV01000072.1 Protein Homology CDS 9330 9743 . - 0 ID=cds-TMR83125.1;Parent=gene-E3V42_08655;Dbxref=NCBI_GP:TMR83125.1;Name=TMR83125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158364.1;locus_tag=E3V42_08655;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=TMR83125.1;transl_table=11 SOQV01000072.1 Genbank gene 9740 9976 . - . ID=gene-E3V42_08660;Name=E3V42_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08660 SOQV01000072.1 Protein Homology CDS 9740 9976 . - 0 ID=cds-TMR83126.1;Parent=gene-E3V42_08660;Dbxref=NCBI_GP:TMR83126.1;Name=TMR83126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446198.1;locus_tag=E3V42_08660;product=AbrB family transcriptional regulator;protein_id=TMR83126.1;transl_table=11 SOQV01000072.1 Genbank gene 10036 11100 . - . ID=gene-E3V42_08665;Name=E3V42_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08665 SOQV01000072.1 Protein Homology CDS 10036 11100 . - 0 ID=cds-TMR83127.1;Parent=gene-E3V42_08665;Dbxref=NCBI_GP:TMR83127.1;Name=TMR83127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756146.1;locus_tag=E3V42_08665;product=restriction endonuclease subunit S;protein_id=TMR83127.1;transl_table=11 SOQV01000072.1 Genbank gene 11113 12606 . - . ID=gene-E3V42_08670;Name=E3V42_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08670 SOQV01000072.1 Protein Homology CDS 11113 12606 . - 0 ID=cds-TMR83128.1;Parent=gene-E3V42_08670;Dbxref=NCBI_GP:TMR83128.1;Name=TMR83128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358384.1;locus_tag=E3V42_08670;product=SAM-dependent DNA methyltransferase;protein_id=TMR83128.1;transl_table=11 SOQV01000072.1 Genbank gene 12695 12805 . - . ID=gene-E3V42_08675;Name=E3V42_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08675 SOQV01000072.1 Protein Homology CDS 12695 12805 . - 0 ID=cds-TMR83129.1;Parent=gene-E3V42_08675;Dbxref=NCBI_GP:TMR83129.1;Name=TMR83129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=E3V42_08675;product=lysyl-tRNA synthetase;protein_id=TMR83129.1;transl_table=11 SOQV01000072.1 Genbank gene 13295 14461 . - . ID=gene-E3V42_08680;Name=E3V42_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08680 SOQV01000072.1 Protein Homology CDS 13295 14461 . - 0 ID=cds-TMR83130.1;Parent=gene-E3V42_08680;Dbxref=NCBI_GP:TMR83130.1;Name=TMR83130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903581.1;locus_tag=E3V42_08680;product=ATP-grasp domain-containing protein;protein_id=TMR83130.1;transl_table=11 SOQV01000072.1 Genbank gene 14474 15214 . - . ID=gene-E3V42_08685;Name=E3V42_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08685 SOQV01000072.1 Protein Homology CDS 14474 15214 . - 0 ID=cds-TMR83131.1;Parent=gene-E3V42_08685;Dbxref=NCBI_GP:TMR83131.1;Name=TMR83131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446459.1;locus_tag=E3V42_08685;product=esterase;protein_id=TMR83131.1;transl_table=11 SOQV01000072.1 Genbank gene 15235 16059 . - . ID=gene-E3V42_08690;Name=E3V42_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08690 SOQV01000072.1 Protein Homology CDS 15235 16059 . - 0 ID=cds-TMR83132.1;Parent=gene-E3V42_08690;Dbxref=NCBI_GP:TMR83132.1;Name=TMR83132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446460.1;locus_tag=E3V42_08690;product=alpha/beta hydrolase;protein_id=TMR83132.1;transl_table=11 SOQV01000072.1 Genbank gene 16196 17410 . - . ID=gene-E3V42_08695;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=E3V42_08695 SOQV01000072.1 Protein Homology CDS 16196 17410 . - 0 ID=cds-TMR83133.1;Parent=gene-E3V42_08695;Dbxref=NCBI_GP:TMR83133.1;Name=TMR83133.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358378.1;locus_tag=E3V42_08695;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=TMR83133.1;transl_table=11 SOQV01000072.1 Genbank gene 17419 18561 . - . ID=gene-E3V42_08700;Name=E3V42_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08700 SOQV01000072.1 Protein Homology CDS 17419 18561 . - 0 ID=cds-TMR83134.1;Parent=gene-E3V42_08700;Dbxref=NCBI_GP:TMR83134.1;Name=TMR83134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446462.1;locus_tag=E3V42_08700;product=cysteine desulfurase;protein_id=TMR83134.1;transl_table=11 SOQV01000072.1 Genbank gene 18701 19126 . + . ID=gene-E3V42_08705;Name=E3V42_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08705 SOQV01000072.1 Protein Homology CDS 18701 19126 . + 0 ID=cds-TMR83135.1;Parent=gene-E3V42_08705;Dbxref=NCBI_GP:TMR83135.1;Name=TMR83135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073932.1;locus_tag=E3V42_08705;product=hypothetical protein;protein_id=TMR83135.1;transl_table=11 SOQV01000072.1 Genbank gene 19324 21627 . - . ID=gene-E3V42_08710;Name=E3V42_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08710 SOQV01000072.1 Protein Homology CDS 19324 21627 . - 0 ID=cds-TMR83136.1;Parent=gene-E3V42_08710;Dbxref=NCBI_GP:TMR83136.1;Name=TMR83136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446464.1;locus_tag=E3V42_08710;product=DNA translocase FtsK;protein_id=TMR83136.1;transl_table=11 ##sequence-region SOQV01000073.1 1 10934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000073.1 Genbank region 1 10934 . + . ID=SOQV01000073.1:1..10934;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000073.1 Genbank pseudogene 1 547 . - . ID=gene-E3V42_08715;Name=E3V42_08715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08715;pseudo=true SOQV01000073.1 Protein Homology CDS 1 547 . - 0 ID=cds-E3V42_08715;Parent=gene-E3V42_08715;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V42_08715;product=transposase;pseudo=true;transl_table=11 SOQV01000073.1 Genbank gene 695 1687 . - . ID=gene-E3V42_08720;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=protein_coding;locus_tag=E3V42_08720 SOQV01000073.1 Protein Homology CDS 695 1687 . - 0 ID=cds-TMR83110.1;Parent=gene-E3V42_08720;Dbxref=NCBI_GP:TMR83110.1;Name=TMR83110.1;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=E3V42_08720;product=choline-binding protein CbpJ;protein_id=TMR83110.1;transl_table=11 SOQV01000073.1 Genbank gene 1705 3033 . - . ID=gene-E3V42_08725;Name=E3V42_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08725 SOQV01000073.1 Protein Homology CDS 1705 3033 . - 0 ID=cds-TMR83111.1;Parent=gene-E3V42_08725;Dbxref=NCBI_GP:TMR83111.1;Name=TMR83111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750730.1;locus_tag=E3V42_08725;product=trypsin-like serine protease;protein_id=TMR83111.1;transl_table=11 SOQV01000073.1 Genbank gene 3175 3672 . - . ID=gene-E3V42_08730;Name=E3V42_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08730 SOQV01000073.1 Protein Homology CDS 3175 3672 . - 0 ID=cds-TMR83112.1;Parent=gene-E3V42_08730;Dbxref=NCBI_GP:TMR83112.1;Name=TMR83112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446841.1;locus_tag=E3V42_08730;product=DNA alkylation repair protein;protein_id=TMR83112.1;transl_table=11 SOQV01000073.1 Genbank pseudogene 3597 3837 . - . ID=gene-E3V42_08735;Name=E3V42_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08735;pseudo=true SOQV01000073.1 Protein Homology CDS 3597 3837 . - 0 ID=cds-E3V42_08735;Parent=gene-E3V42_08735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812384.1;locus_tag=E3V42_08735;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQV01000073.1 Genbank gene 3838 4470 . - . ID=gene-E3V42_08740;Name=E3V42_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08740 SOQV01000073.1 Protein Homology CDS 3838 4470 . - 0 ID=cds-TMR83113.1;Parent=gene-E3V42_08740;Dbxref=NCBI_GP:TMR83113.1;Name=TMR83113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446842.1;locus_tag=E3V42_08740;product=response regulator transcription factor;protein_id=TMR83113.1;transl_table=11 SOQV01000073.1 Genbank gene 4484 5479 . - . ID=gene-E3V42_08745;Name=E3V42_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08745 SOQV01000073.1 Protein Homology CDS 4484 5479 . - 0 ID=cds-TMR83114.1;Parent=gene-E3V42_08745;Dbxref=NCBI_GP:TMR83114.1;Name=TMR83114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357937.1;locus_tag=E3V42_08745;product=sensor histidine kinase;protein_id=TMR83114.1;transl_table=11 SOQV01000073.1 Genbank gene 5476 6174 . - . ID=gene-E3V42_08750;Name=E3V42_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08750 SOQV01000073.1 Protein Homology CDS 5476 6174 . - 0 ID=cds-TMR83115.1;Parent=gene-E3V42_08750;Dbxref=NCBI_GP:TMR83115.1;Name=TMR83115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446844.1;locus_tag=E3V42_08750;product=transporter;protein_id=TMR83115.1;transl_table=11 SOQV01000073.1 Genbank gene 6251 7261 . - . ID=gene-E3V42_08755;Name=E3V42_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08755 SOQV01000073.1 Protein Homology CDS 6251 7261 . - 0 ID=cds-TMR83116.1;Parent=gene-E3V42_08755;Dbxref=NCBI_GP:TMR83116.1;Name=TMR83116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357935.1;locus_tag=E3V42_08755;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=TMR83116.1;transl_table=11 SOQV01000073.1 Genbank gene 7245 8252 . - . ID=gene-E3V42_08760;Name=E3V42_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08760 SOQV01000073.1 Protein Homology CDS 7245 8252 . - 0 ID=cds-TMR83117.1;Parent=gene-E3V42_08760;Dbxref=NCBI_GP:TMR83117.1;Name=TMR83117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446846.1;locus_tag=E3V42_08760;product=phosphomevalonate kinase;protein_id=TMR83117.1;transl_table=11 SOQV01000073.1 Genbank gene 8239 9192 . - . ID=gene-E3V42_08765;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=E3V42_08765 SOQV01000073.1 Protein Homology CDS 8239 9192 . - 0 ID=cds-TMR83118.1;Parent=gene-E3V42_08765;Dbxref=NCBI_GP:TMR83118.1;Name=TMR83118.1;gbkey=CDS;gene=mvaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446847.1;locus_tag=E3V42_08765;product=diphosphomevalonate decarboxylase;protein_id=TMR83118.1;transl_table=11 SOQV01000073.1 Genbank gene 9174 10052 . - . ID=gene-E3V42_08770;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=E3V42_08770 SOQV01000073.1 Protein Homology CDS 9174 10052 . - 0 ID=cds-TMR83119.1;Parent=gene-E3V42_08770;Dbxref=NCBI_GP:TMR83119.1;Name=TMR83119.1;gbkey=CDS;gene=mvk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357932.1;locus_tag=E3V42_08770;product=mevalonate kinase;protein_id=TMR83119.1;transl_table=11 SOQV01000073.1 Genbank pseudogene 10173 10297 . - . ID=gene-E3V42_08775;Name=E3V42_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08775;pseudo=true SOQV01000073.1 Protein Homology CDS 10173 10297 . - 0 ID=cds-E3V42_08775;Parent=gene-E3V42_08775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812596.1;locus_tag=E3V42_08775;product=choline-binding protein C;pseudo=true;transl_table=11 SOQV01000073.1 Genbank pseudogene 10331 10453 . - . ID=gene-E3V42_08780;Name=E3V42_08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08780;pseudo=true SOQV01000073.1 Protein Homology CDS 10331 10453 . - 0 ID=cds-E3V42_08780;Parent=gene-E3V42_08780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13340.4;locus_tag=E3V42_08780;product=transposase;pseudo=true;transl_table=11 SOQV01000073.1 Genbank pseudogene 10454 10934 . - . ID=gene-E3V42_08785;Name=E3V42_08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08785;pseudo=true SOQV01000073.1 Protein Homology CDS 10454 10934 . - 1 ID=cds-E3V42_08785;Parent=gene-E3V42_08785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_08785;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000074.1 1 4941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000074.1 Genbank region 1 4941 . + . ID=SOQV01000074.1:1..4941;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000074.1 Genbank gene 1 101 . - . ID=gene-E3V42_08790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V42_08790;partial=true;start_range=.,1 SOQV01000074.1 cmsearch rRNA 1 101 . - . ID=rna-E3V42_08790;Parent=gene-E3V42_08790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_08790;partial=true;product=5S ribosomal RNA;start_range=.,1 SOQV01000074.1 cmsearch exon 1 101 . - . ID=exon-E3V42_08790-1;Parent=rna-E3V42_08790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_08790;partial=true;product=5S ribosomal RNA;start_range=.,1 SOQV01000074.1 Genbank gene 177 3080 . - . ID=gene-E3V42_08795;Name=E3V42_08795;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V42_08795 SOQV01000074.1 Genbank rRNA 177 3080 . - . ID=rna-E3V42_08795;Parent=gene-E3V42_08795;gbkey=rRNA;locus_tag=E3V42_08795;product=23S ribosomal RNA SOQV01000074.1 Genbank exon 177 3080 . - . ID=exon-E3V42_08795-1;Parent=rna-E3V42_08795;gbkey=rRNA;locus_tag=E3V42_08795;product=23S ribosomal RNA SOQV01000074.1 Genbank gene 3204 3276 . - . ID=gene-E3V42_08800;Name=E3V42_08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_08800 SOQV01000074.1 tRNAscan-SE tRNA 3204 3276 . - . ID=rna-E3V42_08800;Parent=gene-E3V42_08800;anticodon=(pos:complement(3241..3243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08800;product=tRNA-Ala SOQV01000074.1 tRNAscan-SE exon 3204 3276 . - . ID=exon-E3V42_08800-1;Parent=rna-E3V42_08800;anticodon=(pos:complement(3241..3243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_08800;product=tRNA-Ala SOQV01000074.1 Genbank gene 3321 4872 . - . ID=gene-E3V42_08805;Name=E3V42_08805;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V42_08805 SOQV01000074.1 Genbank rRNA 3321 4872 . - . ID=rna-E3V42_08805;Parent=gene-E3V42_08805;gbkey=rRNA;locus_tag=E3V42_08805;product=16S ribosomal RNA SOQV01000074.1 Genbank exon 3321 4872 . - . ID=exon-E3V42_08805-1;Parent=rna-E3V42_08805;gbkey=rRNA;locus_tag=E3V42_08805;product=16S ribosomal RNA ##sequence-region SOQV01000075.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000075.1 Genbank region 1 650 . + . ID=SOQV01000075.1:1..650;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000075.1 Genbank gene 227 529 . + . ID=gene-E3V42_08810;Name=E3V42_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08810 SOQV01000075.1 Protein Homology CDS 227 529 . + 0 ID=cds-TMR83094.1;Parent=gene-E3V42_08810;Dbxref=NCBI_GP:TMR83094.1;Name=TMR83094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017255.1;locus_tag=E3V42_08810;product=maturase;protein_id=TMR83094.1;transl_table=11 SOQV01000075.1 Genbank gene 501 650 . + . ID=gene-E3V42_08815;Name=E3V42_08815;end_range=650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08815;partial=true SOQV01000075.1 Protein Homology CDS 501 650 . + 0 ID=cds-TMR83095.1;Parent=gene-E3V42_08815;Dbxref=NCBI_GP:TMR83095.1;Name=TMR83095.1;end_range=650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398343.1;locus_tag=E3V42_08815;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=TMR83095.1;transl_table=11 ##sequence-region SOQV01000076.1 1 507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000076.1 Genbank region 1 507 . + . ID=SOQV01000076.1:1..507;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000076.1 Genbank gene 1 350 . + . ID=gene-E3V42_08820;Name=E3V42_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08820;partial=true;start_range=.,1 SOQV01000076.1 Protein Homology CDS 1 350 . + 2 ID=cds-TMR83092.1;Parent=gene-E3V42_08820;Dbxref=NCBI_GP:TMR83092.1;Name=TMR83092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_08820;partial=true;product=IS30 family transposase;protein_id=TMR83092.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000077.1 1 50893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000077.1 Genbank region 1 50893 . + . ID=SOQV01000077.1:1..50893;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000077.1 Genbank pseudogene 144 284 . + . ID=gene-E3V42_08825;Name=E3V42_08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08825;pseudo=true SOQV01000077.1 Protein Homology CDS 144 284 . + 0 ID=cds-E3V42_08825;Parent=gene-E3V42_08825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V42_08825;product=ISNCY family transposase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank gene 311 487 . - . ID=gene-E3V42_08830;Name=E3V42_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08830 SOQV01000077.1 Protein Homology CDS 311 487 . - 0 ID=cds-TMR83019.1;Parent=gene-E3V42_08830;Dbxref=NCBI_GP:TMR83019.1;Name=TMR83019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001858191.1;locus_tag=E3V42_08830;product=glycosyl transferase family 8;protein_id=TMR83019.1;transl_table=11 SOQV01000077.1 Genbank pseudogene 598 796 . - . ID=gene-E3V42_08835;Name=E3V42_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08835;pseudo=true SOQV01000077.1 Protein Homology CDS 598 796 . - 0 ID=cds-E3V42_08835;Parent=gene-E3V42_08835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808887.1;locus_tag=E3V42_08835;product=glycosyl transferase family 8;pseudo=true;transl_table=11 SOQV01000077.1 Genbank gene 1550 3094 . - . ID=gene-E3V42_08840;Name=E3V42_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08840 SOQV01000077.1 Protein Homology CDS 1550 3094 . - 0 ID=cds-TMR83020.1;Parent=gene-E3V42_08840;Dbxref=NCBI_GP:TMR83020.1;Name=TMR83020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=E3V42_08840;product=peptide chain release factor 3;protein_id=TMR83020.1;transl_table=11 SOQV01000077.1 Genbank gene 3307 3609 . + . ID=gene-E3V42_08845;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=E3V42_08845 SOQV01000077.1 Protein Homology CDS 3307 3609 . + 0 ID=cds-TMR83021.1;Parent=gene-E3V42_08845;Dbxref=NCBI_GP:TMR83021.1;Name=TMR83021.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357989.1;locus_tag=E3V42_08845;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=TMR83021.1;transl_table=11 SOQV01000077.1 Genbank gene 3609 5075 . + . ID=gene-E3V42_08850;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=E3V42_08850 SOQV01000077.1 Protein Homology CDS 3609 5075 . + 0 ID=cds-TMR83022.1;Parent=gene-E3V42_08850;Dbxref=NCBI_GP:TMR83022.1;Name=TMR83022.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446768.1;locus_tag=E3V42_08850;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=TMR83022.1;transl_table=11 SOQV01000077.1 Genbank gene 5075 6517 . + . ID=gene-E3V42_08855;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=E3V42_08855 SOQV01000077.1 Protein Homology CDS 5075 6517 . + 0 ID=cds-TMR83023.1;Parent=gene-E3V42_08855;Dbxref=NCBI_GP:TMR83023.1;Name=TMR83023.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357987.1;locus_tag=E3V42_08855;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=TMR83023.1;transl_table=11 SOQV01000077.1 Genbank gene 6648 7208 . + . ID=gene-E3V42_08860;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=E3V42_08860 SOQV01000077.1 Protein Homology CDS 6648 7208 . + 0 ID=cds-TMR83024.1;Parent=gene-E3V42_08860;Dbxref=NCBI_GP:TMR83024.1;Name=TMR83024.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=E3V42_08860;product=elongation factor P;protein_id=TMR83024.1;transl_table=11 SOQV01000077.1 Genbank gene 7230 7619 . + . ID=gene-E3V42_08865;Name=E3V42_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08865 SOQV01000077.1 Protein Homology CDS 7230 7619 . + 0 ID=cds-TMR83025.1;Parent=gene-E3V42_08865;Dbxref=NCBI_GP:TMR83025.1;Name=TMR83025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446772.1;locus_tag=E3V42_08865;product=Asp23/Gls24 family envelope stress response protein;protein_id=TMR83025.1;transl_table=11 SOQV01000077.1 Genbank gene 7612 8037 . + . ID=gene-E3V42_08870;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=E3V42_08870 SOQV01000077.1 Protein Homology CDS 7612 8037 . + 0 ID=cds-TMR83026.1;Parent=gene-E3V42_08870;Dbxref=NCBI_GP:TMR83026.1;Name=TMR83026.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203629.1;locus_tag=E3V42_08870;product=transcription antitermination factor NusB;protein_id=TMR83026.1;transl_table=11 SOQV01000077.1 Genbank gene 8151 8918 . - . ID=gene-E3V42_08875;Name=E3V42_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08875 SOQV01000077.1 Protein Homology CDS 8151 8918 . - 0 ID=cds-TMR83027.1;Parent=gene-E3V42_08875;Dbxref=NCBI_GP:TMR83027.1;Name=TMR83027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357981.1;locus_tag=E3V42_08875;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=TMR83027.1;transl_table=11 SOQV01000077.1 Genbank gene 8915 9781 . - . ID=gene-E3V42_08880;Name=E3V42_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08880 SOQV01000077.1 Protein Homology CDS 8915 9781 . - 0 ID=cds-TMR83028.1;Parent=gene-E3V42_08880;Dbxref=NCBI_GP:TMR83028.1;Name=TMR83028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357980.1;locus_tag=E3V42_08880;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=TMR83028.1;transl_table=11 SOQV01000077.1 Genbank gene 9818 11185 . - . ID=gene-E3V42_08885;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=E3V42_08885 SOQV01000077.1 Protein Homology CDS 9818 11185 . - 0 ID=cds-TMR83029.1;Parent=gene-E3V42_08885;Dbxref=NCBI_GP:TMR83029.1;Name=TMR83029.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357979.1;locus_tag=E3V42_08885;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=TMR83029.1;transl_table=11 SOQV01000077.1 Genbank gene 11197 11619 . - . ID=gene-E3V42_08890;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=E3V42_08890 SOQV01000077.1 Protein Homology CDS 11197 11619 . - 0 ID=cds-TMR83062.1;Parent=gene-E3V42_08890;Dbxref=NCBI_GP:TMR83062.1;Name=TMR83062.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357978.1;locus_tag=E3V42_08890;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=TMR83062.1;transl_table=11 SOQV01000077.1 Genbank gene 11616 12101 . - . ID=gene-E3V42_08895;Name=E3V42_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08895 SOQV01000077.1 Protein Homology CDS 11616 12101 . - 0 ID=cds-TMR83030.1;Parent=gene-E3V42_08895;Dbxref=NCBI_GP:TMR83030.1;Name=TMR83030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357977.1;locus_tag=E3V42_08895;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=TMR83030.1;transl_table=11 SOQV01000077.1 Genbank gene 12104 13339 . - . ID=gene-E3V42_08900;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=E3V42_08900 SOQV01000077.1 Protein Homology CDS 12104 13339 . - 0 ID=cds-TMR83031.1;Parent=gene-E3V42_08900;Dbxref=NCBI_GP:TMR83031.1;Name=TMR83031.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446781.1;locus_tag=E3V42_08900;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=TMR83031.1;transl_table=11 SOQV01000077.1 Genbank gene 13361 14092 . - . ID=gene-E3V42_08905;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=E3V42_08905 SOQV01000077.1 Protein Homology CDS 13361 14092 . - 0 ID=cds-TMR83032.1;Parent=gene-E3V42_08905;Dbxref=NCBI_GP:TMR83032.1;Name=TMR83032.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357975.1;locus_tag=E3V42_08905;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=TMR83032.1;transl_table=11 SOQV01000077.1 Genbank gene 14126 15046 . - . ID=gene-E3V42_08910;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=E3V42_08910 SOQV01000077.1 Protein Homology CDS 14126 15046 . - 0 ID=cds-TMR83033.1;Parent=gene-E3V42_08910;Dbxref=NCBI_GP:TMR83033.1;Name=TMR83033.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357974.1;locus_tag=E3V42_08910;product=ACP S-malonyltransferase;protein_id=TMR83033.1;transl_table=11 SOQV01000077.1 Genbank gene 15039 16013 . - . ID=gene-E3V42_08915;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=E3V42_08915 SOQV01000077.1 Protein Homology CDS 15039 16013 . - 0 ID=cds-TMR83034.1;Parent=gene-E3V42_08915;Dbxref=NCBI_GP:TMR83034.1;Name=TMR83034.1;gbkey=CDS;gene=fabK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357973.1;locus_tag=E3V42_08915;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=TMR83034.1;transl_table=11 SOQV01000077.1 Genbank pseudogene 16119 16202 . + . ID=gene-E3V42_08920;Name=E3V42_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08920;pseudo=true SOQV01000077.1 Protein Homology CDS 16119 16202 . + 0 ID=cds-E3V42_08920;Parent=gene-E3V42_08920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=E3V42_08920;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank gene 16236 16460 . - . ID=gene-E3V42_08925;Name=E3V42_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08925 SOQV01000077.1 Protein Homology CDS 16236 16460 . - 0 ID=cds-TMR83035.1;Parent=gene-E3V42_08925;Dbxref=NCBI_GP:TMR83035.1;Name=TMR83035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446785.1;locus_tag=E3V42_08925;product=acyl carrier protein;protein_id=TMR83035.1;transl_table=11 SOQV01000077.1 Genbank gene 16519 17493 . - . ID=gene-E3V42_08930;Name=E3V42_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08930 SOQV01000077.1 Protein Homology CDS 16519 17493 . - 0 ID=cds-TMR83036.1;Parent=gene-E3V42_08930;Dbxref=NCBI_GP:TMR83036.1;Name=TMR83036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357971.1;locus_tag=E3V42_08930;product=ketoacyl-ACP synthase III;protein_id=TMR83036.1;transl_table=11 SOQV01000077.1 Genbank gene 17493 17927 . - . ID=gene-E3V42_08935;Name=E3V42_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08935 SOQV01000077.1 Protein Homology CDS 17493 17927 . - 0 ID=cds-TMR83037.1;Parent=gene-E3V42_08935;Dbxref=NCBI_GP:TMR83037.1;Name=TMR83037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357970.1;locus_tag=E3V42_08935;product=MarR family transcriptional regulator;protein_id=TMR83037.1;transl_table=11 SOQV01000077.1 Genbank gene 18021 18806 . - . ID=gene-E3V42_08940;Name=E3V42_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08940 SOQV01000077.1 Protein Homology CDS 18021 18806 . - 0 ID=cds-TMR83038.1;Parent=gene-E3V42_08940;Dbxref=NCBI_GP:TMR83038.1;Name=TMR83038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357969.1;locus_tag=E3V42_08940;product=enoyl-CoA hydratase;protein_id=TMR83038.1;transl_table=11 SOQV01000077.1 Genbank pseudogene 18988 19089 . + . ID=gene-E3V42_08945;Name=E3V42_08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_08945;pseudo=true SOQV01000077.1 Protein Homology CDS 18988 19089 . + 0 ID=cds-E3V42_08945;Parent=gene-E3V42_08945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808883.1;locus_tag=E3V42_08945;product=aspartate kinase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank gene 19176 20540 . + . ID=gene-E3V42_08950;Name=E3V42_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08950 SOQV01000077.1 Protein Homology CDS 19176 20540 . + 0 ID=cds-TMR83039.1;Parent=gene-E3V42_08950;Dbxref=NCBI_GP:TMR83039.1;Name=TMR83039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357968.1;locus_tag=E3V42_08950;product=aspartate kinase;protein_id=TMR83039.1;transl_table=11 SOQV01000077.1 Genbank gene 20543 20914 . + . ID=gene-E3V42_08955;Name=E3V42_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08955 SOQV01000077.1 Protein Homology CDS 20543 20914 . + 0 ID=cds-TMR83040.1;Parent=gene-E3V42_08955;Dbxref=NCBI_GP:TMR83040.1;Name=TMR83040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357967.1;locus_tag=E3V42_08955;product=DUF956 family protein;protein_id=TMR83040.1;transl_table=11 SOQV01000077.1 Genbank gene 21128 22402 . + . ID=gene-E3V42_08960;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=E3V42_08960 SOQV01000077.1 Protein Homology CDS 21128 22402 . + 0 ID=cds-TMR83041.1;Parent=gene-E3V42_08960;Dbxref=NCBI_GP:TMR83041.1;Name=TMR83041.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446791.1;locus_tag=E3V42_08960;product=serine--tRNA ligase;protein_id=TMR83041.1;transl_table=11 SOQV01000077.1 Genbank gene 22427 23326 . - . ID=gene-E3V42_08965;Name=E3V42_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08965 SOQV01000077.1 Protein Homology CDS 22427 23326 . - 0 ID=cds-TMR83042.1;Parent=gene-E3V42_08965;Dbxref=NCBI_GP:TMR83042.1;Name=TMR83042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446821.1;locus_tag=E3V42_08965;product=TDT family transporter;protein_id=TMR83042.1;transl_table=11 SOQV01000077.1 Genbank gene 23437 23985 . - . ID=gene-E3V42_08970;Name=E3V42_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08970 SOQV01000077.1 Protein Homology CDS 23437 23985 . - 0 ID=cds-TMR83043.1;Parent=gene-E3V42_08970;Dbxref=NCBI_GP:TMR83043.1;Name=TMR83043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446822.1;locus_tag=E3V42_08970;product=carboxymuconolactone decarboxylase family protein;protein_id=TMR83043.1;transl_table=11 SOQV01000077.1 Genbank gene 24308 25630 . - . ID=gene-E3V42_08975;Name=E3V42_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08975 SOQV01000077.1 Protein Homology CDS 24308 25630 . - 0 ID=cds-TMR83044.1;Parent=gene-E3V42_08975;Dbxref=NCBI_GP:TMR83044.1;Name=TMR83044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357963.1;locus_tag=E3V42_08975;product=sodium:alanine symporter family protein;protein_id=TMR83044.1;transl_table=11 SOQV01000077.1 cmsearch riboswitch 25721 25809 . - . ID=id-SOQV01000077.1:25721..25809;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch SOQV01000077.1 Genbank gene 26064 27230 . + . ID=gene-E3V42_08980;Name=E3V42_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08980 SOQV01000077.1 Protein Homology CDS 26064 27230 . + 0 ID=cds-TMR83045.1;Parent=gene-E3V42_08980;Dbxref=NCBI_GP:TMR83045.1;Name=TMR83045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160547.1;locus_tag=E3V42_08980;product=IS30 family transposase;protein_id=TMR83045.1;transl_table=11 SOQV01000077.1 Genbank gene 27518 29854 . - . ID=gene-E3V42_08985;Name=E3V42_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08985 SOQV01000077.1 Protein Homology CDS 27518 29854 . - 0 ID=cds-TMR83046.1;Parent=gene-E3V42_08985;Dbxref=NCBI_GP:TMR83046.1;Name=TMR83046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446834.1;locus_tag=E3V42_08985;product=endonuclease MutS2;protein_id=TMR83046.1;transl_table=11 SOQV01000077.1 Genbank gene 29957 30505 . - . ID=gene-E3V42_08990;Name=E3V42_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_08990 SOQV01000077.1 Protein Homology CDS 29957 30505 . - 0 ID=cds-TMR83047.1;Parent=gene-E3V42_08990;Dbxref=NCBI_GP:TMR83047.1;Name=TMR83047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446835.1;locus_tag=E3V42_08990;product=CvpA family protein;protein_id=TMR83047.1;transl_table=11 SOQV01000077.1 Genbank gene 30502 30804 . - . ID=gene-E3V42_08995;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=E3V42_08995 SOQV01000077.1 Protein Homology CDS 30502 30804 . - 0 ID=cds-TMR83048.1;Parent=gene-E3V42_08995;Dbxref=NCBI_GP:TMR83048.1;Name=TMR83048.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446836.1;locus_tag=E3V42_08995;product=cell division protein ZapA;protein_id=TMR83048.1;transl_table=11 SOQV01000077.1 Genbank gene 30891 31772 . + . ID=gene-E3V42_09000;Name=E3V42_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09000 SOQV01000077.1 Protein Homology CDS 30891 31772 . + 0 ID=cds-TMR83049.1;Parent=gene-E3V42_09000;Dbxref=NCBI_GP:TMR83049.1;Name=TMR83049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446837.1;locus_tag=E3V42_09000;product=ribonuclease HIII;protein_id=TMR83049.1;transl_table=11 SOQV01000077.1 Genbank gene 31776 32390 . + . ID=gene-E3V42_09005;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=E3V42_09005 SOQV01000077.1 Protein Homology CDS 31776 32390 . + 0 ID=cds-TMR83050.1;Parent=gene-E3V42_09005;Dbxref=NCBI_GP:TMR83050.1;Name=TMR83050.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357958.1;locus_tag=E3V42_09005;product=signal peptidase I;protein_id=TMR83050.1;transl_table=11 SOQV01000077.1 Genbank gene 32686 35052 . + . ID=gene-E3V42_09010;Name=E3V42_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09010 SOQV01000077.1 Protein Homology CDS 32686 35052 . + 0 ID=cds-TMR83051.1;Parent=gene-E3V42_09010;Dbxref=NCBI_GP:TMR83051.1;Name=TMR83051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357957.1;locus_tag=E3V42_09010;product=ATP-dependent RecD-like DNA helicase;protein_id=TMR83051.1;transl_table=11 SOQV01000077.1 Genbank gene 35206 36489 . - . ID=gene-E3V42_09015;Name=E3V42_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09015 SOQV01000077.1 Protein Homology CDS 35206 36489 . - 0 ID=cds-TMR83052.1;Parent=gene-E3V42_09015;Dbxref=NCBI_GP:TMR83052.1;Name=TMR83052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446840.1;locus_tag=E3V42_09015;product=trigger factor;protein_id=TMR83052.1;transl_table=11 SOQV01000077.1 Genbank gene 37039 38664 . - . ID=gene-E3V42_09020;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=E3V42_09020 SOQV01000077.1 Protein Homology CDS 37039 38664 . - 0 ID=cds-TMR83053.1;Parent=gene-E3V42_09020;Dbxref=NCBI_GP:TMR83053.1;Name=TMR83053.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359290.1;locus_tag=E3V42_09020;product=alpha%2Calpha-phosphotrehalase;protein_id=TMR83053.1;transl_table=11 SOQV01000077.1 Genbank gene 38756 38869 . - . ID=gene-E3V42_09025;Name=E3V42_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09025 SOQV01000077.1 Protein Homology CDS 38756 38869 . - 0 ID=cds-TMR83063.1;Parent=gene-E3V42_09025;Dbxref=NCBI_GP:TMR83063.1;Name=TMR83063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=E3V42_09025;product=DNA alkylation repair protein;protein_id=TMR83063.1;transl_table=11 SOQV01000077.1 Genbank gene 38842 40959 . - . ID=gene-E3V42_09030;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=E3V42_09030 SOQV01000077.1 Protein Homology CDS 38842 40959 . - 0 ID=cds-TMR83054.1;Parent=gene-E3V42_09030;Dbxref=NCBI_GP:TMR83054.1;Name=TMR83054.1;gbkey=CDS;gene=treB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359291.1;locus_tag=E3V42_09030;product=PTS trehalose transporter subunit IIBC;protein_id=TMR83054.1;transl_table=11 SOQV01000077.1 Genbank gene 40994 41704 . + . ID=gene-E3V42_09035;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=E3V42_09035 SOQV01000077.1 Protein Homology CDS 40994 41704 . + 0 ID=cds-TMR83055.1;Parent=gene-E3V42_09035;Dbxref=NCBI_GP:TMR83055.1;Name=TMR83055.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359292.1;locus_tag=E3V42_09035;product=trehalose operon repressor;protein_id=TMR83055.1;transl_table=11 SOQV01000077.1 Genbank pseudogene 41859 43135 . + . ID=gene-E3V42_09040;Name=E3V42_09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09040;pseudo=true SOQV01000077.1 Protein Homology CDS 41859 43135 . + 0 ID=cds-E3V42_09040;Parent=gene-E3V42_09040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=E3V42_09040;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank gene 43201 44127 . - . ID=gene-E3V42_09045;Name=E3V42_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09045 SOQV01000077.1 Protein Homology CDS 43201 44127 . - 0 ID=cds-TMR83056.1;Parent=gene-E3V42_09045;Dbxref=NCBI_GP:TMR83056.1;Name=TMR83056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445465.1;locus_tag=E3V42_09045;product=ABC transporter ATP-binding protein;protein_id=TMR83056.1;transl_table=11 SOQV01000077.1 Genbank gene 44138 45205 . - . ID=gene-E3V42_09050;Name=E3V42_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09050 SOQV01000077.1 Protein Homology CDS 44138 45205 . - 0 ID=cds-TMR83057.1;Parent=gene-E3V42_09050;Dbxref=NCBI_GP:TMR83057.1;Name=TMR83057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359296.1;locus_tag=E3V42_09050;product=ABC transporter ATP-binding protein;protein_id=TMR83057.1;transl_table=11 SOQV01000077.1 Genbank gene 45214 46140 . - . ID=gene-E3V42_09055;Name=E3V42_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09055 SOQV01000077.1 Protein Homology CDS 45214 46140 . - 0 ID=cds-TMR83058.1;Parent=gene-E3V42_09055;Dbxref=NCBI_GP:TMR83058.1;Name=TMR83058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445463.1;locus_tag=E3V42_09055;product=ABC transporter permease;protein_id=TMR83058.1;transl_table=11 SOQV01000077.1 Genbank gene 46140 47636 . - . ID=gene-E3V42_09060;Name=E3V42_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09060 SOQV01000077.1 Protein Homology CDS 46140 47636 . - 0 ID=cds-TMR83059.1;Parent=gene-E3V42_09060;Dbxref=NCBI_GP:TMR83059.1;Name=TMR83059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359298.1;locus_tag=E3V42_09060;product=ABC transporter permease;protein_id=TMR83059.1;transl_table=11 SOQV01000077.1 Genbank gene 47703 49682 . - . ID=gene-E3V42_09065;Name=E3V42_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09065 SOQV01000077.1 Protein Homology CDS 47703 49682 . - 0 ID=cds-TMR83060.1;Parent=gene-E3V42_09065;Dbxref=NCBI_GP:TMR83060.1;Name=TMR83060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359299.1;locus_tag=E3V42_09065;product=peptide ABC transporter substrate-binding protein;protein_id=TMR83060.1;transl_table=11 SOQV01000077.1 Genbank gene 49778 49984 . + . ID=gene-E3V42_09070;Name=E3V42_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09070 SOQV01000077.1 Protein Homology CDS 49778 49984 . + 0 ID=cds-TMR83061.1;Parent=gene-E3V42_09070;Dbxref=NCBI_GP:TMR83061.1;Name=TMR83061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855484.1;locus_tag=E3V42_09070;product=hypothetical protein;protein_id=TMR83061.1;transl_table=11 SOQV01000077.1 Genbank pseudogene 49986 50069 . - . ID=gene-E3V42_09075;Name=E3V42_09075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09075;pseudo=true SOQV01000077.1 Protein Homology CDS 49986 50069 . - 0 ID=cds-E3V42_09075;Parent=gene-E3V42_09075;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558199.1;locus_tag=E3V42_09075;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank pseudogene 50185 50485 . - . ID=gene-E3V42_09080;Name=E3V42_09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09080;pseudo=true SOQV01000077.1 Protein Homology CDS 50185 50485 . - 0 ID=cds-E3V42_09080;Parent=gene-E3V42_09080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_09080;product=transposase;pseudo=true;transl_table=11 SOQV01000077.1 Genbank pseudogene 50549 50893 . - . ID=gene-E3V42_09085;Name=E3V42_09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09085;pseudo=true SOQV01000077.1 Protein Homology CDS 50549 50893 . - 0 ID=cds-E3V42_09085;Parent=gene-E3V42_09085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_09085;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000078.1 1 1963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000078.1 Genbank region 1 1963 . + . ID=SOQV01000078.1:1..1963;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000078.1 Genbank gene 98 1831 . - . ID=gene-E3V42_09090;Name=E3V42_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09090 SOQV01000078.1 Protein Homology CDS 98 1831 . - 0 ID=cds-TMR83017.1;Parent=gene-E3V42_09090;Dbxref=NCBI_GP:TMR83017.1;Name=TMR83017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013778385.1;locus_tag=E3V42_09090;product=IS1634 family transposase;protein_id=TMR83017.1;transl_table=11 ##sequence-region SOQV01000079.1 1 17557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000079.1 Genbank region 1 17557 . + . ID=SOQV01000079.1:1..17557;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000079.1 Genbank gene 1 233 . - . ID=gene-E3V42_09095;Name=E3V42_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09095;partial=true;start_range=.,1 SOQV01000079.1 Protein Homology CDS 1 233 . - 0 ID=cds-TMR82899.1;Parent=gene-E3V42_09095;Dbxref=NCBI_GP:TMR82899.1;Name=TMR82899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_09095;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TMR82899.1;start_range=.,1;transl_table=11 SOQV01000079.1 Genbank pseudogene 275 414 . - . ID=gene-E3V42_09100;Name=E3V42_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09100;pseudo=true SOQV01000079.1 Protein Homology CDS 275 414 . - 0 ID=cds-E3V42_09100;Parent=gene-E3V42_09100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_09100;product=transposase;pseudo=true;transl_table=11 SOQV01000079.1 Genbank pseudogene 623 1343 . + . ID=gene-E3V42_09105;Name=E3V42_09105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09105;pseudo=true SOQV01000079.1 Protein Homology CDS 623 1343 . + 0 ID=cds-E3V42_09105;Parent=gene-E3V42_09105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=E3V42_09105;product=IS5 family transposase;pseudo=true;transl_table=11 SOQV01000079.1 Genbank gene 1489 2364 . - . ID=gene-E3V42_09110;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=E3V42_09110 SOQV01000079.1 Protein Homology CDS 1489 2364 . - 0 ID=cds-TMR82900.1;Parent=gene-E3V42_09110;Dbxref=NCBI_GP:TMR82900.1;Name=TMR82900.1;gbkey=CDS;gene=aguB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358417.1;locus_tag=E3V42_09110;product=N-carbamoylputrescine amidase;protein_id=TMR82900.1;transl_table=11 SOQV01000079.1 Genbank gene 2374 3459 . - . ID=gene-E3V42_09115;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=E3V42_09115 SOQV01000079.1 Protein Homology CDS 2374 3459 . - 0 ID=cds-TMR82901.1;Parent=gene-E3V42_09115;Dbxref=NCBI_GP:TMR82901.1;Name=TMR82901.1;gbkey=CDS;gene=aguA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358416.1;locus_tag=E3V42_09115;product=agmatine deiminase;protein_id=TMR82901.1;transl_table=11 SOQV01000079.1 Genbank gene 3456 4583 . - . ID=gene-E3V42_09120;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=E3V42_09120 SOQV01000079.1 Protein Homology CDS 3456 4583 . - 0 ID=cds-TMR82902.1;Parent=gene-E3V42_09120;Dbxref=NCBI_GP:TMR82902.1;Name=TMR82902.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358415.1;locus_tag=E3V42_09120;product=carboxynorspermidine decarboxylase;protein_id=TMR82902.1;transl_table=11 SOQV01000079.1 Genbank gene 4583 5842 . - . ID=gene-E3V42_09125;Name=E3V42_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09125 SOQV01000079.1 Protein Homology CDS 4583 5842 . - 0 ID=cds-TMR82903.1;Parent=gene-E3V42_09125;Dbxref=NCBI_GP:TMR82903.1;Name=TMR82903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358414.1;locus_tag=E3V42_09125;product=saccharopine dehydrogenase family protein;protein_id=TMR82903.1;transl_table=11 SOQV01000079.1 Genbank gene 5839 6699 . - . ID=gene-E3V42_09130;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=E3V42_09130 SOQV01000079.1 Protein Homology CDS 5839 6699 . - 0 ID=cds-TMR82904.1;Parent=gene-E3V42_09130;Dbxref=NCBI_GP:TMR82904.1;Name=TMR82904.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358413.1;locus_tag=E3V42_09130;product=polyamine aminopropyltransferase;protein_id=TMR82904.1;transl_table=11 SOQV01000079.1 Genbank gene 6700 8160 . - . ID=gene-E3V42_09135;Name=E3V42_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09135 SOQV01000079.1 Protein Homology CDS 6700 8160 . - 0 ID=cds-TMR82905.1;Parent=gene-E3V42_09135;Dbxref=NCBI_GP:TMR82905.1;Name=TMR82905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732143.1;locus_tag=E3V42_09135;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=TMR82905.1;transl_table=11 SOQV01000079.1 Genbank gene 8864 9559 . + . ID=gene-E3V42_09140;Name=E3V42_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09140 SOQV01000079.1 Protein Homology CDS 8864 9559 . + 0 ID=cds-TMR82906.1;Parent=gene-E3V42_09140;Dbxref=NCBI_GP:TMR82906.1;Name=TMR82906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446186.1;locus_tag=E3V42_09140;product=VIT family protein;protein_id=TMR82906.1;transl_table=11 SOQV01000079.1 Genbank pseudogene 9556 9635 . - . ID=gene-E3V42_09145;Name=E3V42_09145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09145;pseudo=true SOQV01000079.1 Protein Homology CDS 9556 9635 . - 0 ID=cds-E3V42_09145;Parent=gene-E3V42_09145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1;locus_tag=E3V42_09145;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000079.1 Genbank gene 9888 11879 . - . ID=gene-E3V42_09150;Name=E3V42_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09150 SOQV01000079.1 Protein Homology CDS 9888 11879 . - 0 ID=cds-TMR82907.1;Parent=gene-E3V42_09150;Dbxref=NCBI_GP:TMR82907.1;Name=TMR82907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446187.1;locus_tag=E3V42_09150;product=ABC transporter permease;protein_id=TMR82907.1;transl_table=11 SOQV01000079.1 Genbank gene 11881 12639 . - . ID=gene-E3V42_09155;Name=E3V42_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09155 SOQV01000079.1 Protein Homology CDS 11881 12639 . - 0 ID=cds-TMR82908.1;Parent=gene-E3V42_09155;Dbxref=NCBI_GP:TMR82908.1;Name=TMR82908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446188.1;locus_tag=E3V42_09155;product=ABC transporter ATP-binding protein;protein_id=TMR82908.1;transl_table=11 SOQV01000079.1 Genbank gene 13024 13215 . + . ID=gene-E3V42_09160;Name=E3V42_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09160 SOQV01000079.1 Protein Homology CDS 13024 13215 . + 0 ID=cds-TMR82909.1;Parent=gene-E3V42_09160;Dbxref=NCBI_GP:TMR82909.1;Name=TMR82909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358405.1;locus_tag=E3V42_09160;product=hypothetical protein;protein_id=TMR82909.1;transl_table=11 SOQV01000079.1 Genbank gene 13358 13630 . - . ID=gene-E3V42_09165;Name=E3V42_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09165 SOQV01000079.1 Protein Homology CDS 13358 13630 . - 0 ID=cds-TMR82910.1;Parent=gene-E3V42_09165;Dbxref=NCBI_GP:TMR82910.1;Name=TMR82910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269704.1;locus_tag=E3V42_09165;product=PspC domain-containing protein;protein_id=TMR82910.1;transl_table=11 SOQV01000079.1 Genbank gene 13689 14138 . - . ID=gene-E3V42_09170;Name=E3V42_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09170 SOQV01000079.1 Protein Homology CDS 13689 14138 . - 0 ID=cds-TMR82911.1;Parent=gene-E3V42_09170;Dbxref=NCBI_GP:TMR82911.1;Name=TMR82911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446192.1;locus_tag=E3V42_09170;product=SprT family protein;protein_id=TMR82911.1;transl_table=11 SOQV01000079.1 Genbank gene 14125 16254 . - . ID=gene-E3V42_09175;Name=E3V42_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09175 SOQV01000079.1 Protein Homology CDS 14125 16254 . - 0 ID=cds-TMR82912.1;Parent=gene-E3V42_09175;Dbxref=NCBI_GP:TMR82912.1;Name=TMR82912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446193.1;locus_tag=E3V42_09175;product=RNA-binding transcriptional accessory protein;protein_id=TMR82912.1;transl_table=11 SOQV01000079.1 Genbank pseudogene 16356 16834 . - . ID=gene-E3V42_09180;Name=E3V42_09180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09180;pseudo=true SOQV01000079.1 Protein Homology CDS 16356 16834 . - 0 ID=cds-E3V42_09180;Parent=gene-E3V42_09180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442116.1;locus_tag=E3V42_09180;product=DUF1919 domain-containing protein;pseudo=true;transl_table=11 SOQV01000079.1 Genbank pseudogene 16839 16931 . - . ID=gene-E3V42_09185;Name=E3V42_09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09185;pseudo=true SOQV01000079.1 Protein Homology CDS 16839 16931 . - 0 ID=cds-E3V42_09185;Parent=gene-E3V42_09185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856145.1;locus_tag=E3V42_09185;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 SOQV01000079.1 Genbank gene 17010 17543 . - . ID=gene-E3V42_09190;Name=E3V42_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09190 SOQV01000079.1 Protein Homology CDS 17010 17543 . - 0 ID=cds-TMR82913.1;Parent=gene-E3V42_09190;Dbxref=NCBI_GP:TMR82913.1;Name=TMR82913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_09190;product=transposase;protein_id=TMR82913.1;transl_table=11 ##sequence-region SOQV01000008.1 1 72863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000008.1 Genbank region 1 72863 . + . ID=SOQV01000008.1:1..72863;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000008.1 Genbank gene 377 7678 . - . ID=gene-E3V42_00605;Name=E3V42_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00605 SOQV01000008.1 Protein Homology CDS 377 7678 . - 0 ID=cds-TMR85463.1;Parent=gene-E3V42_00605;Dbxref=NCBI_GP:TMR85463.1;Name=TMR85463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357674.1;locus_tag=E3V42_00605;product=YSIRK-type signal peptide-containing protein;protein_id=TMR85463.1;transl_table=11 SOQV01000008.1 Genbank gene 8238 8672 . - . ID=gene-E3V42_00610;Name=E3V42_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00610 SOQV01000008.1 Protein Homology CDS 8238 8672 . - 0 ID=cds-TMR85464.1;Parent=gene-E3V42_00610;Dbxref=NCBI_GP:TMR85464.1;Name=TMR85464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096818.1;locus_tag=E3V42_00610;product=preprotein translocase subunit SecB;protein_id=TMR85464.1;transl_table=11 SOQV01000008.1 Genbank gene 8672 9016 . - . ID=gene-E3V42_00615;Name=E3V42_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00615 SOQV01000008.1 Protein Homology CDS 8672 9016 . - 0 ID=cds-TMR85465.1;Parent=gene-E3V42_00615;Dbxref=NCBI_GP:TMR85465.1;Name=TMR85465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002962.1;locus_tag=E3V42_00615;product=hypothetical protein;protein_id=TMR85465.1;transl_table=11 SOQV01000008.1 Genbank gene 9031 9618 . - . ID=gene-E3V42_00620;Name=E3V42_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00620 SOQV01000008.1 Protein Homology CDS 9031 9618 . - 0 ID=cds-TMR85466.1;Parent=gene-E3V42_00620;Dbxref=NCBI_GP:TMR85466.1;Name=TMR85466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002986.1;locus_tag=E3V42_00620;product=hypothetical protein;protein_id=TMR85466.1;transl_table=11 SOQV01000008.1 Genbank gene 9981 10496 . - . ID=gene-E3V42_00625;Name=E3V42_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00625 SOQV01000008.1 Protein Homology CDS 9981 10496 . - 0 ID=cds-TMR85467.1;Parent=gene-E3V42_00625;Dbxref=NCBI_GP:TMR85467.1;Name=TMR85467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837197.1;locus_tag=E3V42_00625;product=hypothetical protein;protein_id=TMR85467.1;transl_table=11 SOQV01000008.1 Genbank gene 11166 11528 . - . ID=gene-E3V42_00630;Name=E3V42_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00630 SOQV01000008.1 Protein Homology CDS 11166 11528 . - 0 ID=cds-TMR85468.1;Parent=gene-E3V42_00630;Dbxref=NCBI_GP:TMR85468.1;Name=TMR85468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604884.1;locus_tag=E3V42_00630;product=hypothetical protein;protein_id=TMR85468.1;transl_table=11 SOQV01000008.1 Genbank gene 11791 13671 . - . ID=gene-E3V42_00635;Name=E3V42_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00635 SOQV01000008.1 Protein Homology CDS 11791 13671 . - 0 ID=cds-TMR85469.1;Parent=gene-E3V42_00635;Dbxref=NCBI_GP:TMR85469.1;Name=TMR85469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359540.1;locus_tag=E3V42_00635;product=beta-N-acetylhexosaminidase;protein_id=TMR85469.1;transl_table=11 SOQV01000008.1 Genbank gene 13665 14546 . - . ID=gene-E3V42_00640;Name=E3V42_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00640 SOQV01000008.1 Protein Homology CDS 13665 14546 . - 0 ID=cds-TMR85470.1;Parent=gene-E3V42_00640;Dbxref=NCBI_GP:TMR85470.1;Name=TMR85470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447093.1;locus_tag=E3V42_00640;product=ROK family protein;protein_id=TMR85470.1;transl_table=11 SOQV01000008.1 Genbank gene 14618 17263 . - . ID=gene-E3V42_00645;Name=E3V42_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00645 SOQV01000008.1 Protein Homology CDS 14618 17263 . - 0 ID=cds-TMR85471.1;Parent=gene-E3V42_00645;Dbxref=NCBI_GP:TMR85471.1;Name=TMR85471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447094.1;locus_tag=E3V42_00645;product=alpha-mannosidase;protein_id=TMR85471.1;transl_table=11 SOQV01000008.1 Genbank gene 17369 17455 . - . ID=gene-E3V42_00650;Name=E3V42_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00650 SOQV01000008.1 Protein Homology CDS 17369 17455 . - 0 ID=cds-TMR85505.1;Parent=gene-E3V42_00650;Dbxref=NCBI_GP:TMR85505.1;Name=TMR85505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808892.1;locus_tag=E3V42_00650;product=DNA alkylation repair protein;protein_id=TMR85505.1;transl_table=11 SOQV01000008.1 Genbank gene 17468 18748 . - . ID=gene-E3V42_00655;Name=E3V42_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00655 SOQV01000008.1 Protein Homology CDS 17468 18748 . - 0 ID=cds-TMR85472.1;Parent=gene-E3V42_00655;Dbxref=NCBI_GP:TMR85472.1;Name=TMR85472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447095.1;locus_tag=E3V42_00655;product=glycoside hydrolase family 125 protein;protein_id=TMR85472.1;transl_table=11 SOQV01000008.1 Genbank gene 18919 21015 . + . ID=gene-E3V42_00660;Name=E3V42_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00660 SOQV01000008.1 Protein Homology CDS 18919 21015 . + 0 ID=cds-TMR85473.1;Parent=gene-E3V42_00660;Dbxref=NCBI_GP:TMR85473.1;Name=TMR85473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399394.1;locus_tag=E3V42_00660;product=alpha-mannosidase;protein_id=TMR85473.1;transl_table=11 SOQV01000008.1 Genbank gene 21128 28285 . - . ID=gene-E3V42_00665;Name=E3V42_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00665 SOQV01000008.1 Protein Homology CDS 21128 28285 . - 0 ID=cds-TMR85474.1;Parent=gene-E3V42_00665;Dbxref=NCBI_GP:TMR85474.1;Name=TMR85474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446414.1;locus_tag=E3V42_00665;product=DUF1542 domain-containing protein;protein_id=TMR85474.1;transl_table=11 SOQV01000008.1 Genbank gene 29460 30026 . - . ID=gene-E3V42_00670;Name=E3V42_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00670 SOQV01000008.1 Protein Homology CDS 29460 30026 . - 0 ID=cds-TMR85475.1;Parent=gene-E3V42_00670;Dbxref=NCBI_GP:TMR85475.1;Name=TMR85475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490634.1;locus_tag=E3V42_00670;product=adenylosuccinate lyase;protein_id=TMR85475.1;transl_table=11 SOQV01000008.1 Genbank gene 30183 31157 . - . ID=gene-E3V42_00675;Name=E3V42_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00675 SOQV01000008.1 Protein Homology CDS 30183 31157 . - 0 ID=cds-TMR85476.1;Parent=gene-E3V42_00675;Dbxref=NCBI_GP:TMR85476.1;Name=TMR85476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=E3V42_00675;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=TMR85476.1;transl_table=11 SOQV01000008.1 Genbank gene 31258 32946 . - . ID=gene-E3V42_00680;Name=E3V42_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00680 SOQV01000008.1 Protein Homology CDS 31258 32946 . - 0 ID=cds-TMR85477.1;Parent=gene-E3V42_00680;Dbxref=NCBI_GP:TMR85477.1;Name=TMR85477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251210.1;locus_tag=E3V42_00680;product=alpha-L-fucosidase;protein_id=TMR85477.1;transl_table=11 SOQV01000008.1 Genbank gene 32948 36736 . - . ID=gene-E3V42_00685;Name=E3V42_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00685 SOQV01000008.1 Protein Homology CDS 32948 36736 . - 0 ID=cds-TMR85478.1;Parent=gene-E3V42_00685;Dbxref=NCBI_GP:TMR85478.1;Name=TMR85478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250572.1;locus_tag=E3V42_00685;product=DUF4982 domain-containing protein;protein_id=TMR85478.1;transl_table=11 SOQV01000008.1 Genbank gene 36974 43414 . - . ID=gene-E3V42_00690;Name=E3V42_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00690 SOQV01000008.1 Protein Homology CDS 36974 43414 . - 0 ID=cds-TMR85479.1;Parent=gene-E3V42_00690;Dbxref=NCBI_GP:TMR85479.1;Name=TMR85479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359552.1;locus_tag=E3V42_00690;product=YSIRK-type signal peptide-containing protein;protein_id=TMR85479.1;transl_table=11 SOQV01000008.1 Genbank gene 43539 43730 . - . ID=gene-E3V42_00695;Name=E3V42_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00695 SOQV01000008.1 Protein Homology CDS 43539 43730 . - 0 ID=cds-TMR85480.1;Parent=gene-E3V42_00695;Dbxref=NCBI_GP:TMR85480.1;Name=TMR85480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_00695;product=hypothetical protein;protein_id=TMR85480.1;transl_table=11 SOQV01000008.1 Genbank gene 43814 44713 . - . ID=gene-E3V42_00700;Name=E3V42_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00700 SOQV01000008.1 Protein Homology CDS 43814 44713 . - 0 ID=cds-TMR85481.1;Parent=gene-E3V42_00700;Dbxref=NCBI_GP:TMR85481.1;Name=TMR85481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359553.1;locus_tag=E3V42_00700;product=SPFH domain-containing protein;protein_id=TMR85481.1;transl_table=11 SOQV01000008.1 Genbank gene 44955 45812 . + . ID=gene-E3V42_00705;Name=E3V42_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00705 SOQV01000008.1 Protein Homology CDS 44955 45812 . + 0 ID=cds-TMR85482.1;Parent=gene-E3V42_00705;Dbxref=NCBI_GP:TMR85482.1;Name=TMR85482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003004374.1;locus_tag=E3V42_00705;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=TMR85482.1;transl_table=11 SOQV01000008.1 Genbank gene 46898 47863 . - . ID=gene-E3V42_00710;Name=E3V42_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00710 SOQV01000008.1 Protein Homology CDS 46898 47863 . - 0 ID=cds-TMR85483.1;Parent=gene-E3V42_00710;Dbxref=NCBI_GP:TMR85483.1;Name=TMR85483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429453.1;locus_tag=E3V42_00710;product=DUF3644 domain-containing protein;protein_id=TMR85483.1;transl_table=11 SOQV01000008.1 Genbank gene 49001 50506 . - . ID=gene-E3V42_00715;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=E3V42_00715 SOQV01000008.1 Protein Homology CDS 49001 50506 . - 0 ID=cds-TMR85484.1;Parent=gene-E3V42_00715;Dbxref=NCBI_GP:TMR85484.1;Name=TMR85484.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447120.1;locus_tag=E3V42_00715;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=TMR85484.1;transl_table=11 SOQV01000008.1 Genbank gene 50516 51322 . - . ID=gene-E3V42_00720;Name=E3V42_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00720 SOQV01000008.1 Protein Homology CDS 50516 51322 . - 0 ID=cds-TMR85485.1;Parent=gene-E3V42_00720;Dbxref=NCBI_GP:TMR85485.1;Name=TMR85485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447121.1;locus_tag=E3V42_00720;product=metal ABC transporter permease;protein_id=TMR85485.1;transl_table=11 SOQV01000008.1 Genbank gene 51315 52019 . - . ID=gene-E3V42_00725;Name=E3V42_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00725 SOQV01000008.1 Protein Homology CDS 51315 52019 . - 0 ID=cds-TMR85486.1;Parent=gene-E3V42_00725;Dbxref=NCBI_GP:TMR85486.1;Name=TMR85486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359568.1;locus_tag=E3V42_00725;product=metal ABC transporter ATP-binding protein;protein_id=TMR85486.1;transl_table=11 SOQV01000008.1 Genbank gene 52019 52459 . - . ID=gene-E3V42_00730;Name=E3V42_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00730 SOQV01000008.1 Protein Homology CDS 52019 52459 . - 0 ID=cds-TMR85487.1;Parent=gene-E3V42_00730;Dbxref=NCBI_GP:TMR85487.1;Name=TMR85487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447123.1;locus_tag=E3V42_00730;product=MarR family transcriptional regulator;protein_id=TMR85487.1;transl_table=11 SOQV01000008.1 Genbank gene 52612 53880 . - . ID=gene-E3V42_00735;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=E3V42_00735 SOQV01000008.1 Protein Homology CDS 52612 53880 . - 0 ID=cds-TMR85488.1;Parent=gene-E3V42_00735;Dbxref=NCBI_GP:TMR85488.1;Name=TMR85488.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447124.1;locus_tag=E3V42_00735;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=TMR85488.1;transl_table=11 SOQV01000008.1 Genbank gene 53873 54112 . - . ID=gene-E3V42_00740;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=E3V42_00740 SOQV01000008.1 Protein Homology CDS 53873 54112 . - 0 ID=cds-TMR85489.1;Parent=gene-E3V42_00740;Dbxref=NCBI_GP:TMR85489.1;Name=TMR85489.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359571.1;locus_tag=E3V42_00740;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=TMR85489.1;transl_table=11 SOQV01000008.1 Genbank gene 54126 55370 . - . ID=gene-E3V42_00745;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=E3V42_00745 SOQV01000008.1 Protein Homology CDS 54126 55370 . - 0 ID=cds-TMR85490.1;Parent=gene-E3V42_00745;Dbxref=NCBI_GP:TMR85490.1;Name=TMR85490.1;gbkey=CDS;gene=dltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359572.1;locus_tag=E3V42_00745;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=TMR85490.1;transl_table=11 SOQV01000008.1 Genbank gene 55367 56917 . - . ID=gene-E3V42_00750;Name=E3V42_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00750 SOQV01000008.1 Protein Homology CDS 55367 56917 . - 0 ID=cds-TMR85491.1;Parent=gene-E3V42_00750;Dbxref=NCBI_GP:TMR85491.1;Name=TMR85491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447127.1;locus_tag=E3V42_00750;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=TMR85491.1;transl_table=11 SOQV01000008.1 Genbank gene 56938 57069 . - . ID=gene-E3V42_00755;Name=E3V42_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00755 SOQV01000008.1 Protein Homology CDS 56938 57069 . - 0 ID=cds-TMR85492.1;Parent=gene-E3V42_00755;Dbxref=NCBI_GP:TMR85492.1;Name=TMR85492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036243.1;locus_tag=E3V42_00755;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=TMR85492.1;transl_table=11 SOQV01000008.1 Genbank pseudogene 57321 57398 . - . ID=gene-E3V42_00760;Name=E3V42_00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00760;pseudo=true SOQV01000008.1 Protein Homology CDS 57321 57398 . - 0 ID=cds-E3V42_00760;Parent=gene-E3V42_00760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397737.1;locus_tag=E3V42_00760;product=DNA alkylation repair protein;pseudo=true;transl_table=11 SOQV01000008.1 Genbank gene 57402 58106 . - . ID=gene-E3V42_00765;Name=E3V42_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00765 SOQV01000008.1 Protein Homology CDS 57402 58106 . - 0 ID=cds-TMR85493.1;Parent=gene-E3V42_00765;Dbxref=NCBI_GP:TMR85493.1;Name=TMR85493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359579.1;locus_tag=E3V42_00765;product=aquaporin family protein;protein_id=TMR85493.1;transl_table=11 SOQV01000008.1 Genbank gene 58176 60002 . - . ID=gene-E3V42_00770;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=E3V42_00770 SOQV01000008.1 Protein Homology CDS 58176 60002 . - 0 ID=cds-TMR85494.1;Parent=gene-E3V42_00770;Dbxref=NCBI_GP:TMR85494.1;Name=TMR85494.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447130.1;locus_tag=E3V42_00770;product=type 1 glycerol-3-phosphate oxidase;protein_id=TMR85494.1;transl_table=11 SOQV01000008.1 Genbank gene 60044 61552 . - . ID=gene-E3V42_00775;Name=E3V42_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00775 SOQV01000008.1 Protein Homology CDS 60044 61552 . - 0 ID=cds-TMR85495.1;Parent=gene-E3V42_00775;Dbxref=NCBI_GP:TMR85495.1;Name=TMR85495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359582.1;locus_tag=E3V42_00775;product=glycerol kinase;protein_id=TMR85495.1;transl_table=11 SOQV01000008.1 Genbank gene 61870 62709 . + . ID=gene-E3V42_00780;Name=E3V42_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00780 SOQV01000008.1 Protein Homology CDS 61870 62709 . + 0 ID=cds-TMR85496.1;Parent=gene-E3V42_00780;Dbxref=NCBI_GP:TMR85496.1;Name=TMR85496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916653.1;locus_tag=E3V42_00780;product=restriction endonuclease;protein_id=TMR85496.1;transl_table=11 SOQV01000008.1 Genbank gene 62714 63700 . + . ID=gene-E3V42_00785;Name=E3V42_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00785 SOQV01000008.1 Protein Homology CDS 62714 63700 . + 0 ID=cds-TMR85497.1;Parent=gene-E3V42_00785;Dbxref=NCBI_GP:TMR85497.1;Name=TMR85497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012766920.1;locus_tag=E3V42_00785;product=adenosine deaminase;protein_id=TMR85497.1;transl_table=11 SOQV01000008.1 Genbank pseudogene 63713 64995 . + . ID=gene-E3V42_00790;Name=E3V42_00790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00790;pseudo=true SOQV01000008.1 Protein Homology CDS 63713 64995 . + 0 ID=cds-E3V42_00790;Parent=gene-E3V42_00790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122618.1;locus_tag=E3V42_00790;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000008.1 Genbank gene 65129 66556 . - . ID=gene-E3V42_00795;Name=E3V42_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00795 SOQV01000008.1 Protein Homology CDS 65129 66556 . - 0 ID=cds-TMR85498.1;Parent=gene-E3V42_00795;Dbxref=NCBI_GP:TMR85498.1;Name=TMR85498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447132.1;locus_tag=E3V42_00795;product=hypothetical protein;protein_id=TMR85498.1;transl_table=11 SOQV01000008.1 Genbank gene 66721 67593 . + . ID=gene-E3V42_00800;Name=E3V42_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00800 SOQV01000008.1 Protein Homology CDS 66721 67593 . + 0 ID=cds-TMR85499.1;Parent=gene-E3V42_00800;Dbxref=NCBI_GP:TMR85499.1;Name=TMR85499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357853.1;locus_tag=E3V42_00800;product=Hsp33 family molecular chaperone HslO;protein_id=TMR85499.1;transl_table=11 SOQV01000008.1 Genbank gene 67550 68560 . + . ID=gene-E3V42_00805;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=E3V42_00805 SOQV01000008.1 Protein Homology CDS 67550 68560 . + 0 ID=cds-TMR85500.1;Parent=gene-E3V42_00805;Dbxref=NCBI_GP:TMR85500.1;Name=TMR85500.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359585.1;locus_tag=E3V42_00805;product=tRNA dihydrouridine synthase DusB;protein_id=TMR85500.1;transl_table=11 SOQV01000008.1 Genbank gene 68631 69329 . - . ID=gene-E3V42_00810;Name=E3V42_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00810 SOQV01000008.1 Protein Homology CDS 68631 69329 . - 0 ID=cds-TMR85501.1;Parent=gene-E3V42_00810;Dbxref=NCBI_GP:TMR85501.1;Name=TMR85501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447136.1;locus_tag=E3V42_00810;product=hypothetical protein;protein_id=TMR85501.1;transl_table=11 SOQV01000008.1 Genbank pseudogene 69617 69846 . + . ID=gene-E3V42_00815;Name=E3V42_00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00815;pseudo=true SOQV01000008.1 Protein Homology CDS 69617 69846 . + 0 ID=cds-E3V42_00815;Parent=gene-E3V42_00815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933124.1;locus_tag=E3V42_00815;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000008.1 Genbank gene 69920 70690 . - . ID=gene-E3V42_00820;Name=E3V42_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00820 SOQV01000008.1 Protein Homology CDS 69920 70690 . - 0 ID=cds-TMR85502.1;Parent=gene-E3V42_00820;Dbxref=NCBI_GP:TMR85502.1;Name=TMR85502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447138.1;locus_tag=E3V42_00820;product=NUDIX hydrolase;protein_id=TMR85502.1;transl_table=11 SOQV01000008.1 Genbank gene 70692 71471 . - . ID=gene-E3V42_00825;Name=E3V42_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00825 SOQV01000008.1 Protein Homology CDS 70692 71471 . - 0 ID=cds-TMR85503.1;Parent=gene-E3V42_00825;Dbxref=NCBI_GP:TMR85503.1;Name=TMR85503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447139.1;locus_tag=E3V42_00825;product=nicotinamide riboside transporter PnuC;protein_id=TMR85503.1;transl_table=11 SOQV01000008.1 Genbank gene 71481 72539 . - . ID=gene-E3V42_00830;Name=E3V42_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00830 SOQV01000008.1 Protein Homology CDS 71481 72539 . - 0 ID=cds-TMR85504.1;Parent=gene-E3V42_00830;Dbxref=NCBI_GP:TMR85504.1;Name=TMR85504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447140.1;locus_tag=E3V42_00830;product=transcriptional regulator;protein_id=TMR85504.1;transl_table=11 ##sequence-region SOQV01000080.1 1 521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000080.1 Genbank region 1 521 . + . ID=SOQV01000080.1:1..521;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000080.1 Genbank pseudogene 1 199 . + . ID=gene-E3V42_09195;Name=E3V42_09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09195;pseudo=true SOQV01000080.1 Protein Homology CDS 1 199 . + 1 ID=cds-E3V42_09195;Parent=gene-E3V42_09195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297013.1;locus_tag=E3V42_09195;product=MFS transporter;pseudo=true;transl_table=11 SOQV01000080.1 Genbank gene 285 521 . + . ID=gene-E3V42_09200;Name=E3V42_09200;end_range=521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09200;partial=true SOQV01000080.1 Protein Homology CDS 285 521 . + 0 ID=cds-TMR82898.1;Parent=gene-E3V42_09200;Dbxref=NCBI_GP:TMR82898.1;Name=TMR82898.1;end_range=521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=E3V42_09200;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=TMR82898.1;transl_table=11 ##sequence-region SOQV01000081.1 1 9577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000081.1 Genbank region 1 9577 . + . ID=SOQV01000081.1:1..9577;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000081.1 Genbank gene 145 1872 . - . ID=gene-E3V42_09205;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=E3V42_09205 SOQV01000081.1 Protein Homology CDS 145 1872 . - 0 ID=cds-TMR82891.1;Parent=gene-E3V42_09205;Dbxref=NCBI_GP:TMR82891.1;Name=TMR82891.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445977.1;locus_tag=E3V42_09205;product=septation ring formation regulator EzrA;protein_id=TMR82891.1;transl_table=11 SOQV01000081.1 Genbank gene 1954 3900 . - . ID=gene-E3V42_09210;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=E3V42_09210 SOQV01000081.1 Protein Homology CDS 1954 3900 . - 0 ID=cds-TMR82892.1;Parent=gene-E3V42_09210;Dbxref=NCBI_GP:TMR82892.1;Name=TMR82892.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358309.1;locus_tag=E3V42_09210;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=TMR82892.1;transl_table=11 SOQV01000081.1 Genbank gene 3915 4487 . - . ID=gene-E3V42_09215;Name=E3V42_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09215 SOQV01000081.1 Protein Homology CDS 3915 4487 . - 0 ID=cds-TMR82893.1;Parent=gene-E3V42_09215;Dbxref=NCBI_GP:TMR82893.1;Name=TMR82893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358308.1;locus_tag=E3V42_09215;product=HAD family hydrolase;protein_id=TMR82893.1;transl_table=11 SOQV01000081.1 Genbank gene 4563 5117 . - . ID=gene-E3V42_09220;Name=E3V42_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09220 SOQV01000081.1 Protein Homology CDS 4563 5117 . - 0 ID=cds-TMR82894.1;Parent=gene-E3V42_09220;Dbxref=NCBI_GP:TMR82894.1;Name=TMR82894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358307.1;locus_tag=E3V42_09220;product=DJ-1/PfpI family protein;protein_id=TMR82894.1;transl_table=11 SOQV01000081.1 Genbank gene 5128 6351 . - . ID=gene-E3V42_09225;Name=E3V42_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09225 SOQV01000081.1 Protein Homology CDS 5128 6351 . - 0 ID=cds-TMR82895.1;Parent=gene-E3V42_09225;Dbxref=NCBI_GP:TMR82895.1;Name=TMR82895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445972.1;locus_tag=E3V42_09225;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=TMR82895.1;transl_table=11 SOQV01000081.1 Genbank gene 6388 8838 . - . ID=gene-E3V42_09230;Name=E3V42_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09230 SOQV01000081.1 Protein Homology CDS 6388 8838 . - 0 ID=cds-TMR82896.1;Parent=gene-E3V42_09230;Dbxref=NCBI_GP:TMR82896.1;Name=TMR82896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445971.1;locus_tag=E3V42_09230;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=TMR82896.1;transl_table=11 SOQV01000081.1 Genbank gene 8822 9010 . - . ID=gene-E3V42_09235;Name=E3V42_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09235 SOQV01000081.1 Protein Homology CDS 8822 9010 . - 0 ID=cds-TMR82897.1;Parent=gene-E3V42_09235;Dbxref=NCBI_GP:TMR82897.1;Name=TMR82897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242435.1;locus_tag=E3V42_09235;product=hypothetical protein;protein_id=TMR82897.1;transl_table=11 SOQV01000081.1 Genbank pseudogene 9038 9451 . - . ID=gene-E3V42_09240;Name=E3V42_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09240;pseudo=true SOQV01000081.1 Protein Homology CDS 9038 9451 . - 0 ID=cds-E3V42_09240;Parent=gene-E3V42_09240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358304.1;locus_tag=E3V42_09240;product=U32 family peptidase;pseudo=true;transl_table=11 ##sequence-region SOQV01000082.1 1 7240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000082.1 Genbank region 1 7240 . + . ID=SOQV01000082.1:1..7240;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000082.1 Genbank pseudogene 75 1052 . + . ID=gene-E3V42_09245;Name=E3V42_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09245;pseudo=true SOQV01000082.1 Protein Homology CDS 75 1052 . + 0 ID=cds-E3V42_09245;Parent=gene-E3V42_09245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558115.1;locus_tag=E3V42_09245;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000082.1 Genbank gene 1082 3514 . - . ID=gene-E3V42_09250;Name=E3V42_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09250 SOQV01000082.1 Protein Homology CDS 1082 3514 . - 0 ID=cds-TMR82885.1;Parent=gene-E3V42_09250;Dbxref=NCBI_GP:TMR82885.1;Name=TMR82885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109706.1;locus_tag=E3V42_09250;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=TMR82885.1;transl_table=11 SOQV01000082.1 Genbank gene 3516 3974 . - . ID=gene-E3V42_09255;Name=E3V42_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09255 SOQV01000082.1 Protein Homology CDS 3516 3974 . - 0 ID=cds-TMR82886.1;Parent=gene-E3V42_09255;Dbxref=NCBI_GP:TMR82886.1;Name=TMR82886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447142.1;locus_tag=E3V42_09255;product=CtsR family transcriptional regulator;protein_id=TMR82886.1;transl_table=11 SOQV01000082.1 Genbank gene 4095 4820 . - . ID=gene-E3V42_09260;Name=E3V42_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09260 SOQV01000082.1 Protein Homology CDS 4095 4820 . - 0 ID=cds-TMR82887.1;Parent=gene-E3V42_09260;Dbxref=NCBI_GP:TMR82887.1;Name=TMR82887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359593.1;locus_tag=E3V42_09260;product=ABC transporter ATP-binding protein;protein_id=TMR82887.1;transl_table=11 SOQV01000082.1 Genbank gene 4820 5827 . - . ID=gene-E3V42_09265;Name=E3V42_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09265 SOQV01000082.1 Protein Homology CDS 4820 5827 . - 0 ID=cds-TMR82888.1;Parent=gene-E3V42_09265;Dbxref=NCBI_GP:TMR82888.1;Name=TMR82888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359594.1;locus_tag=E3V42_09265;product=ABC transporter substrate-binding protein;protein_id=TMR82888.1;transl_table=11 SOQV01000082.1 Genbank gene 5866 6627 . - . ID=gene-E3V42_09270;Name=E3V42_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09270 SOQV01000082.1 Protein Homology CDS 5866 6627 . - 0 ID=cds-TMR82889.1;Parent=gene-E3V42_09270;Dbxref=NCBI_GP:TMR82889.1;Name=TMR82889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447145.1;locus_tag=E3V42_09270;product=ABC transporter permease;protein_id=TMR82889.1;transl_table=11 SOQV01000082.1 Genbank gene 6587 6877 . - . ID=gene-E3V42_09275;Name=E3V42_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09275 SOQV01000082.1 Protein Homology CDS 6587 6877 . - 0 ID=cds-TMR82890.1;Parent=gene-E3V42_09275;Dbxref=NCBI_GP:TMR82890.1;Name=TMR82890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359596.1;locus_tag=E3V42_09275;product=hypothetical protein;protein_id=TMR82890.1;transl_table=11 SOQV01000082.1 cmsearch riboswitch 6947 7049 . - . ID=id-SOQV01000082.1:6947..7049;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch ##sequence-region SOQV01000083.1 1 12173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000083.1 Genbank region 1 12173 . + . ID=SOQV01000083.1:1..12173;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000083.1 Genbank gene 1 61 . - . ID=gene-E3V42_09280;Name=E3V42_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09280;partial=true;start_range=.,1 SOQV01000083.1 Protein Homology CDS 1 61 . - 0 ID=cds-TMR82884.1;Parent=gene-E3V42_09280;Dbxref=NCBI_GP:TMR82884.1;Name=TMR82884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=E3V42_09280;partial=true;product=IS200/IS605 family transposase;protein_id=TMR82884.1;start_range=.,1;transl_table=11 SOQV01000083.1 Genbank pseudogene 201 716 . - . ID=gene-E3V42_09285;Name=E3V42_09285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09285;pseudo=true SOQV01000083.1 Protein Homology CDS 201 716 . - 0 ID=cds-E3V42_09285;Parent=gene-E3V42_09285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445970.1;locus_tag=E3V42_09285;product=U32 family peptidase;pseudo=true;transl_table=11 SOQV01000083.1 Genbank gene 856 1143 . + . ID=gene-E3V42_09290;Name=E3V42_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09290 SOQV01000083.1 Protein Homology CDS 856 1143 . + 0 ID=cds-TMR82871.1;Parent=gene-E3V42_09290;Dbxref=NCBI_GP:TMR82871.1;Name=TMR82871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358303.1;locus_tag=E3V42_09290;product=DUF3270 family protein;protein_id=TMR82871.1;transl_table=11 SOQV01000083.1 Genbank gene 1313 2647 . - . ID=gene-E3V42_09295;Name=E3V42_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09295 SOQV01000083.1 Protein Homology CDS 1313 2647 . - 0 ID=cds-TMR82872.1;Parent=gene-E3V42_09295;Dbxref=NCBI_GP:TMR82872.1;Name=TMR82872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358302.1;locus_tag=E3V42_09295;product=HAMP domain-containing histidine kinase;protein_id=TMR82872.1;transl_table=11 SOQV01000083.1 Genbank gene 2637 3311 . - . ID=gene-E3V42_09300;Name=E3V42_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09300 SOQV01000083.1 Protein Homology CDS 2637 3311 . - 0 ID=cds-TMR82873.1;Parent=gene-E3V42_09300;Dbxref=NCBI_GP:TMR82873.1;Name=TMR82873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445967.1;locus_tag=E3V42_09300;product=response regulator transcription factor;protein_id=TMR82873.1;transl_table=11 SOQV01000083.1 Genbank gene 3418 5964 . - . ID=gene-E3V42_09305;Name=E3V42_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09305 SOQV01000083.1 Protein Homology CDS 3418 5964 . - 0 ID=cds-TMR82874.1;Parent=gene-E3V42_09305;Dbxref=NCBI_GP:TMR82874.1;Name=TMR82874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445966.1;locus_tag=E3V42_09305;product=aminopeptidase;protein_id=TMR82874.1;transl_table=11 SOQV01000083.1 Genbank gene 6087 6527 . - . ID=gene-E3V42_09310;Name=E3V42_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09310 SOQV01000083.1 Protein Homology CDS 6087 6527 . - 0 ID=cds-TMR82875.1;Parent=gene-E3V42_09310;Dbxref=NCBI_GP:TMR82875.1;Name=TMR82875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358299.1;locus_tag=E3V42_09310;product=ASCH domain-containing protein;protein_id=TMR82875.1;transl_table=11 SOQV01000083.1 Genbank gene 6502 7377 . - . ID=gene-E3V42_09315;Name=E3V42_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09315 SOQV01000083.1 Protein Homology CDS 6502 7377 . - 0 ID=cds-TMR82876.1;Parent=gene-E3V42_09315;Dbxref=NCBI_GP:TMR82876.1;Name=TMR82876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358298.1;locus_tag=E3V42_09315;product=PEP-utilizing enzyme%2C TIM barrel domain protein;protein_id=TMR82876.1;transl_table=11 SOQV01000083.1 Genbank gene 7413 8141 . - . ID=gene-E3V42_09320;Name=E3V42_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09320 SOQV01000083.1 Protein Homology CDS 7413 8141 . - 0 ID=cds-TMR82877.1;Parent=gene-E3V42_09320;Dbxref=NCBI_GP:TMR82877.1;Name=TMR82877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358297.1;locus_tag=E3V42_09320;product=GNAT family N-acetyltransferase;protein_id=TMR82877.1;transl_table=11 SOQV01000083.1 Genbank gene 8149 8628 . - . ID=gene-E3V42_09325;Name=E3V42_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09325 SOQV01000083.1 Protein Homology CDS 8149 8628 . - 0 ID=cds-TMR82878.1;Parent=gene-E3V42_09325;Dbxref=NCBI_GP:TMR82878.1;Name=TMR82878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445962.1;locus_tag=E3V42_09325;product=NUDIX domain-containing protein;protein_id=TMR82878.1;transl_table=11 SOQV01000083.1 Genbank gene 8638 9336 . - . ID=gene-E3V42_09330;Name=E3V42_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09330 SOQV01000083.1 Protein Homology CDS 8638 9336 . - 0 ID=cds-TMR82879.1;Parent=gene-E3V42_09330;Dbxref=NCBI_GP:TMR82879.1;Name=TMR82879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358295.1;locus_tag=E3V42_09330;product=3-oxoacyl-ACP reductase;protein_id=TMR82879.1;transl_table=11 SOQV01000083.1 Genbank gene 9329 9565 . - . ID=gene-E3V42_09335;Name=E3V42_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09335 SOQV01000083.1 Protein Homology CDS 9329 9565 . - 0 ID=cds-TMR82880.1;Parent=gene-E3V42_09335;Dbxref=NCBI_GP:TMR82880.1;Name=TMR82880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445960.1;locus_tag=E3V42_09335;product=DUF2829 domain-containing protein;protein_id=TMR82880.1;transl_table=11 SOQV01000083.1 Genbank gene 9665 10591 . - . ID=gene-E3V42_09340;Name=E3V42_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09340 SOQV01000083.1 Protein Homology CDS 9665 10591 . - 0 ID=cds-TMR82881.1;Parent=gene-E3V42_09340;Dbxref=NCBI_GP:TMR82881.1;Name=TMR82881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445959.1;locus_tag=E3V42_09340;product=aldo/keto reductase family oxidoreductase;protein_id=TMR82881.1;transl_table=11 SOQV01000083.1 Genbank gene 10664 11479 . - . ID=gene-E3V42_09345;Name=E3V42_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09345 SOQV01000083.1 Protein Homology CDS 10664 11479 . - 0 ID=cds-TMR82882.1;Parent=gene-E3V42_09345;Dbxref=NCBI_GP:TMR82882.1;Name=TMR82882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358292.1;locus_tag=E3V42_09345;product=hypothetical protein;protein_id=TMR82882.1;transl_table=11 SOQV01000083.1 Genbank gene 11483 11806 . - . ID=gene-E3V42_09350;Name=E3V42_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09350 SOQV01000083.1 Protein Homology CDS 11483 11806 . - 0 ID=cds-TMR82883.1;Parent=gene-E3V42_09350;Dbxref=NCBI_GP:TMR82883.1;Name=TMR82883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358291.1;locus_tag=E3V42_09350;product=PadR family transcriptional regulator;protein_id=TMR82883.1;transl_table=11 ##sequence-region SOQV01000084.1 1 3733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000084.1 Genbank region 1 3733 . + . ID=SOQV01000084.1:1..3733;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000084.1 Genbank gene 1 408 . + . ID=gene-E3V42_09355;Name=E3V42_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09355;partial=true;start_range=.,1 SOQV01000084.1 Protein Homology CDS 1 408 . + 0 ID=cds-TMR82866.1;Parent=gene-E3V42_09355;Dbxref=NCBI_GP:TMR82866.1;Name=TMR82866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_09355;partial=true;product=transposase;protein_id=TMR82866.1;start_range=.,1;transl_table=11 SOQV01000084.1 Genbank gene 717 1628 . - . ID=gene-E3V42_09360;Name=E3V42_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09360 SOQV01000084.1 Protein Homology CDS 717 1628 . - 0 ID=cds-TMR82869.1;Parent=gene-E3V42_09360;Dbxref=NCBI_GP:TMR82869.1;Name=TMR82869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445542.1;locus_tag=E3V42_09360;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=TMR82869.1;transl_table=11 SOQV01000084.1 Genbank gene 1809 3047 . - . ID=gene-E3V42_09365;Name=E3V42_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09365 SOQV01000084.1 Protein Homology CDS 1809 3047 . - 0 ID=cds-TMR82867.1;Parent=gene-E3V42_09365;Dbxref=NCBI_GP:TMR82867.1;Name=TMR82867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722392.1;locus_tag=E3V42_09365;product=peptidase C14;protein_id=TMR82867.1;transl_table=11 SOQV01000084.1 Genbank gene 3140 3733 . + . ID=gene-E3V42_09370;Name=E3V42_09370;end_range=3733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09370;partial=true SOQV01000084.1 Protein Homology CDS 3140 3733 . + 0 ID=cds-TMR82868.1;Parent=gene-E3V42_09370;Dbxref=NCBI_GP:TMR82868.1;Name=TMR82868.1;end_range=3733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=E3V42_09370;partial=true;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=TMR82868.1;transl_table=11 ##sequence-region SOQV01000085.1 1 568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000085.1 Genbank region 1 568 . + . ID=SOQV01000085.1:1..568;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000085.1 Genbank gene 1 568 . + . ID=gene-E3V42_09375;Name=E3V42_09375;end_range=568,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09375;partial=true;start_range=.,1 SOQV01000085.1 Protein Homology CDS 1 568 . + 1 ID=cds-TMR82852.1;Parent=gene-E3V42_09375;Dbxref=NCBI_GP:TMR82852.1;Name=TMR82852.1;end_range=568,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_09375;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR82852.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000086.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000086.1 Genbank region 1 525 . + . ID=SOQV01000086.1:1..525;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000086.1 Genbank gene 1 525 . + . ID=gene-E3V42_09380;Name=E3V42_09380;end_range=525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09380;partial=true;start_range=.,1 SOQV01000086.1 Protein Homology CDS 1 525 . + 2 ID=cds-TMR82851.1;Parent=gene-E3V42_09380;Dbxref=NCBI_GP:TMR82851.1;Name=TMR82851.1;end_range=525,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=E3V42_09380;partial=true;product=DUF1542 domain-containing protein;protein_id=TMR82851.1;start_range=.,1;transl_table=11 ##sequence-region SOQV01000087.1 1 1509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000087.1 Genbank region 1 1509 . + . ID=SOQV01000087.1:1..1509;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000087.1 Genbank pseudogene 89 1379 . + . ID=gene-E3V42_09385;Name=E3V42_09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09385;pseudo=true SOQV01000087.1 Protein Homology CDS 89 1379 . + 0 ID=cds-E3V42_09385;Parent=gene-E3V42_09385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595216.1;locus_tag=E3V42_09385;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000088.1 1 903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000088.1 Genbank region 1 903 . + . ID=SOQV01000088.1:1..903;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000088.1 Genbank pseudogene 1 382 . + . ID=gene-E3V42_09390;Name=E3V42_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09390;pseudo=true SOQV01000088.1 Protein Homology CDS 1 382 . + 1 ID=cds-E3V42_09390;Parent=gene-E3V42_09390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446251.1;locus_tag=E3V42_09390;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 SOQV01000088.1 Genbank pseudogene 487 903 . - . ID=gene-E3V42_09395;Name=E3V42_09395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09395;pseudo=true SOQV01000088.1 Protein Homology CDS 487 903 . - 0 ID=cds-E3V42_09395;Parent=gene-E3V42_09395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V42_09395;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000089.1 1 1139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000089.1 Genbank region 1 1139 . + . ID=SOQV01000089.1:1..1139;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000089.1 Genbank pseudogene 1 102 . + . ID=gene-E3V42_09400;Name=E3V42_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09400;pseudo=true SOQV01000089.1 Protein Homology CDS 1 102 . + 0 ID=cds-E3V42_09400;Parent=gene-E3V42_09400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514203.1;locus_tag=E3V42_09400;product=transposase;pseudo=true;transl_table=11 SOQV01000089.1 Genbank gene 203 409 . + . ID=gene-E3V42_09405;Name=E3V42_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09405 SOQV01000089.1 Protein Homology CDS 203 409 . + 0 ID=cds-TMR82828.1;Parent=gene-E3V42_09405;Dbxref=NCBI_GP:TMR82828.1;Name=TMR82828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_09405;product=hypothetical protein;protein_id=TMR82828.1;transl_table=11 SOQV01000089.1 Genbank pseudogene 505 960 . + . ID=gene-E3V42_09410;Name=E3V42_09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09410;pseudo=true SOQV01000089.1 Protein Homology CDS 505 960 . + 0 ID=cds-E3V42_09410;Parent=gene-E3V42_09410;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810126.1;locus_tag=E3V42_09410;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000089.1 Genbank gene 983 1139 . + . ID=gene-E3V42_09415;Name=E3V42_09415;end_range=1139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09415;partial=true SOQV01000089.1 Protein Homology CDS 983 1139 . + 0 ID=cds-TMR82829.1;Parent=gene-E3V42_09415;Dbxref=NCBI_GP:TMR82829.1;Name=TMR82829.1;end_range=1139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_09415;partial=true;product=IS630 family transposase;protein_id=TMR82829.1;transl_table=11 ##sequence-region SOQV01000009.1 1 4260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000009.1 Genbank region 1 4260 . + . ID=SOQV01000009.1:1..4260;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000009.1 Genbank gene 1 164 . + . ID=gene-E3V42_00835;Name=E3V42_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00835;partial=true;start_range=.,1 SOQV01000009.1 Protein Homology CDS 1 164 . + 2 ID=cds-TMR85435.1;Parent=gene-E3V42_00835;Dbxref=NCBI_GP:TMR85435.1;Name=TMR85435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854424.1;locus_tag=E3V42_00835;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=TMR85435.1;start_range=.,1;transl_table=11 SOQV01000009.1 Genbank gene 218 571 . + . ID=gene-E3V42_00840;Name=E3V42_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00840 SOQV01000009.1 Protein Homology CDS 218 571 . + 0 ID=cds-TMR85436.1;Parent=gene-E3V42_00840;Dbxref=NCBI_GP:TMR85436.1;Name=TMR85436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827621.1;locus_tag=E3V42_00840;product=GMP synthase;protein_id=TMR85436.1;transl_table=11 SOQV01000009.1 Genbank pseudogene 626 850 . + . ID=gene-E3V42_00845;Name=E3V42_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_00845;pseudo=true SOQV01000009.1 Protein Homology CDS 626 850 . + 0 ID=cds-E3V42_00845;Parent=gene-E3V42_00845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_268520.1;locus_tag=E3V42_00845;product=IS66 family transposase;pseudo=true;transl_table=11 SOQV01000009.1 Genbank gene 1108 2535 . - . ID=gene-E3V42_00850;Name=E3V42_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00850 SOQV01000009.1 GeneMarkS-2+ CDS 1108 2535 . - 0 ID=cds-TMR85437.1;Parent=gene-E3V42_00850;Dbxref=NCBI_GP:TMR85437.1;Name=TMR85437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_00850;product=hypothetical protein;protein_id=TMR85437.1;transl_table=11 SOQV01000009.1 Genbank gene 2544 3722 . - . ID=gene-E3V42_00855;Name=E3V42_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00855 SOQV01000009.1 Protein Homology CDS 2544 3722 . - 0 ID=cds-TMR85438.1;Parent=gene-E3V42_00855;Dbxref=NCBI_GP:TMR85438.1;Name=TMR85438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=E3V42_00855;product=MFS transporter;protein_id=TMR85438.1;transl_table=11 SOQV01000009.1 Genbank gene 3715 3948 . - . ID=gene-E3V42_00860;Name=E3V42_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00860 SOQV01000009.1 GeneMarkS-2+ CDS 3715 3948 . - 0 ID=cds-TMR85439.1;Parent=gene-E3V42_00860;Dbxref=NCBI_GP:TMR85439.1;Name=TMR85439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_00860;product=hypothetical protein;protein_id=TMR85439.1;transl_table=11 SOQV01000009.1 Genbank gene 4022 4260 . - . ID=gene-E3V42_00865;Name=E3V42_00865;end_range=4260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_00865;partial=true SOQV01000009.1 Protein Homology CDS 4022 4260 . - 2 ID=cds-TMR85440.1;Parent=gene-E3V42_00865;Dbxref=NCBI_GP:TMR85440.1;Name=TMR85440.1;end_range=4260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514209.1;locus_tag=E3V42_00865;partial=true;product=transposase;protein_id=TMR85440.1;transl_table=11 ##sequence-region SOQV01000090.1 1 47336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000090.1 Genbank region 1 47336 . + . ID=SOQV01000090.1:1..47336;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000090.1 Genbank gene 1 578 . + . ID=gene-E3V42_09420;Name=E3V42_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09420;partial=true;start_range=.,1 SOQV01000090.1 Protein Homology CDS 1 578 . + 2 ID=cds-TMR82753.1;Parent=gene-E3V42_09420;Dbxref=NCBI_GP:TMR82753.1;Name=TMR82753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=E3V42_09420;partial=true;product=IS30 family transposase;protein_id=TMR82753.1;start_range=.,1;transl_table=11 SOQV01000090.1 Genbank pseudogene 524 721 . + . ID=gene-E3V42_09425;Name=E3V42_09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09425;pseudo=true SOQV01000090.1 Protein Homology CDS 524 721 . + 0 ID=cds-E3V42_09425;Parent=gene-E3V42_09425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=E3V42_09425;product=Rgg/GadR/MutR family transcriptional regulator;pseudo=true;transl_table=11 SOQV01000090.1 Genbank pseudogene 953 1136 . - . ID=gene-E3V42_09430;Name=E3V42_09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09430;pseudo=true SOQV01000090.1 Protein Homology CDS 953 1136 . - 0 ID=cds-E3V42_09430;Parent=gene-E3V42_09430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269813.1;locus_tag=E3V42_09430;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000090.1 Genbank gene 1146 1493 . - . ID=gene-E3V42_09435;Name=E3V42_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09435 SOQV01000090.1 Protein Homology CDS 1146 1493 . - 0 ID=cds-TMR82754.1;Parent=gene-E3V42_09435;Dbxref=NCBI_GP:TMR82754.1;Name=TMR82754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445270.1;locus_tag=E3V42_09435;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TMR82754.1;transl_table=11 SOQV01000090.1 Genbank gene 1483 1770 . - . ID=gene-E3V42_09440;Name=E3V42_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09440 SOQV01000090.1 Protein Homology CDS 1483 1770 . - 0 ID=cds-TMR82755.1;Parent=gene-E3V42_09440;Dbxref=NCBI_GP:TMR82755.1;Name=TMR82755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445269.1;locus_tag=E3V42_09440;product=hypothetical protein;protein_id=TMR82755.1;transl_table=11 SOQV01000090.1 Genbank gene 1933 2544 . - . ID=gene-E3V42_09445;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=E3V42_09445 SOQV01000090.1 Protein Homology CDS 1933 2544 . - 0 ID=cds-TMR82756.1;Parent=gene-E3V42_09445;Dbxref=NCBI_GP:TMR82756.1;Name=TMR82756.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=E3V42_09445;product=30S ribosomal protein S4;protein_id=TMR82756.1;transl_table=11 SOQV01000090.1 Genbank gene 2739 3791 . - . ID=gene-E3V42_09450;Name=E3V42_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09450 SOQV01000090.1 Protein Homology CDS 2739 3791 . - 0 ID=cds-TMR82757.1;Parent=gene-E3V42_09450;Dbxref=NCBI_GP:TMR82757.1;Name=TMR82757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445264.1;locus_tag=E3V42_09450;product=HAMP domain-containing histidine kinase;protein_id=TMR82757.1;transl_table=11 SOQV01000090.1 Genbank gene 3788 4486 . - . ID=gene-E3V42_09455;Name=E3V42_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09455 SOQV01000090.1 Protein Homology CDS 3788 4486 . - 0 ID=cds-TMR82758.1;Parent=gene-E3V42_09455;Dbxref=NCBI_GP:TMR82758.1;Name=TMR82758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445263.1;locus_tag=E3V42_09455;product=response regulator transcription factor;protein_id=TMR82758.1;transl_table=11 SOQV01000090.1 Genbank gene 4653 6896 . - . ID=gene-E3V42_09460;Name=E3V42_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09460 SOQV01000090.1 Protein Homology CDS 4653 6896 . - 0 ID=cds-TMR82759.1;Parent=gene-E3V42_09460;Dbxref=NCBI_GP:TMR82759.1;Name=TMR82759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445262.1;locus_tag=E3V42_09460;product=YSIRK-type signal peptide-containing protein;protein_id=TMR82759.1;transl_table=11 SOQV01000090.1 Genbank gene 7012 8028 . - . ID=gene-E3V42_09465;Name=E3V42_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09465 SOQV01000090.1 Protein Homology CDS 7012 8028 . - 0 ID=cds-TMR82760.1;Parent=gene-E3V42_09465;Dbxref=NCBI_GP:TMR82760.1;Name=TMR82760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445261.1;locus_tag=E3V42_09465;product=glycosyltransferase family 2 protein;protein_id=TMR82760.1;transl_table=11 SOQV01000090.1 Genbank pseudogene 8065 8139 . + . ID=gene-E3V42_09470;Name=E3V42_09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09470;pseudo=true SOQV01000090.1 Protein Homology CDS 8065 8139 . + 0 ID=cds-E3V42_09470;Parent=gene-E3V42_09470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_09470;product=chlorohydrolase;pseudo=true;transl_table=11 SOQV01000090.1 Genbank gene 8126 8305 . + . ID=gene-E3V42_09475;Name=E3V42_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09475 SOQV01000090.1 Protein Homology CDS 8126 8305 . + 0 ID=cds-TMR82761.1;Parent=gene-E3V42_09475;Dbxref=NCBI_GP:TMR82761.1;Name=TMR82761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=E3V42_09475;product=hypothetical protein;protein_id=TMR82761.1;transl_table=11 SOQV01000090.1 Genbank gene 8382 9047 . - . ID=gene-E3V42_09480;Name=E3V42_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09480 SOQV01000090.1 Protein Homology CDS 8382 9047 . - 0 ID=cds-TMR82762.1;Parent=gene-E3V42_09480;Dbxref=NCBI_GP:TMR82762.1;Name=TMR82762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283900.1;locus_tag=E3V42_09480;product=TrkA family potassium uptake protein;protein_id=TMR82762.1;transl_table=11 SOQV01000090.1 Genbank gene 9061 10440 . - . ID=gene-E3V42_09485;Name=E3V42_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09485 SOQV01000090.1 Protein Homology CDS 9061 10440 . - 0 ID=cds-TMR82763.1;Parent=gene-E3V42_09485;Dbxref=NCBI_GP:TMR82763.1;Name=TMR82763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357664.1;locus_tag=E3V42_09485;product=TrkH family potassium uptake protein;protein_id=TMR82763.1;transl_table=11 SOQV01000090.1 Genbank gene 10654 11418 . - . ID=gene-E3V42_09490;Name=E3V42_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09490 SOQV01000090.1 Protein Homology CDS 10654 11418 . - 0 ID=cds-TMR82764.1;Parent=gene-E3V42_09490;Dbxref=NCBI_GP:TMR82764.1;Name=TMR82764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357662.1;locus_tag=E3V42_09490;product=phosphorylase;protein_id=TMR82764.1;transl_table=11 SOQV01000090.1 Genbank gene 11559 12413 . - . ID=gene-E3V42_09495;Name=E3V42_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09495 SOQV01000090.1 Protein Homology CDS 11559 12413 . - 0 ID=cds-TMR82765.1;Parent=gene-E3V42_09495;Dbxref=NCBI_GP:TMR82765.1;Name=TMR82765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357660.1;locus_tag=E3V42_09495;product=VOC family protein;protein_id=TMR82765.1;transl_table=11 SOQV01000090.1 Genbank gene 12614 13651 . - . ID=gene-E3V42_09500;Name=E3V42_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09500 SOQV01000090.1 Protein Homology CDS 12614 13651 . - 0 ID=cds-TMR82766.1;Parent=gene-E3V42_09500;Dbxref=NCBI_GP:TMR82766.1;Name=TMR82766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357659.1;locus_tag=E3V42_09500;product=galactose mutarotase;protein_id=TMR82766.1;transl_table=11 SOQV01000090.1 Genbank gene 13767 14933 . - . ID=gene-E3V42_09505;Name=E3V42_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09505 SOQV01000090.1 Protein Homology CDS 13767 14933 . - 0 ID=cds-TMR82767.1;Parent=gene-E3V42_09505;Dbxref=NCBI_GP:TMR82767.1;Name=TMR82767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357658.1;locus_tag=E3V42_09505;product=SIS domain-containing protein;protein_id=TMR82767.1;transl_table=11 SOQV01000090.1 Genbank gene 15033 15437 . - . ID=gene-E3V42_09510;Name=E3V42_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09510 SOQV01000090.1 Protein Homology CDS 15033 15437 . - 0 ID=cds-TMR82768.1;Parent=gene-E3V42_09510;Dbxref=NCBI_GP:TMR82768.1;Name=TMR82768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357657.1;locus_tag=E3V42_09510;product=PTS sugar transporter subunit IIA;protein_id=TMR82768.1;transl_table=11 SOQV01000090.1 Genbank gene 15441 16262 . - . ID=gene-E3V42_09515;Name=E3V42_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09515 SOQV01000090.1 Protein Homology CDS 15441 16262 . - 0 ID=cds-TMR82769.1;Parent=gene-E3V42_09515;Dbxref=NCBI_GP:TMR82769.1;Name=TMR82769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398555.1;locus_tag=E3V42_09515;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=TMR82769.1;transl_table=11 SOQV01000090.1 Genbank gene 16249 17154 . - . ID=gene-E3V42_09520;Name=E3V42_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09520 SOQV01000090.1 Protein Homology CDS 16249 17154 . - 0 ID=cds-TMR82770.1;Parent=gene-E3V42_09520;Dbxref=NCBI_GP:TMR82770.1;Name=TMR82770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445252.1;locus_tag=E3V42_09520;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=TMR82770.1;transl_table=11 SOQV01000090.1 Genbank gene 17181 17657 . - . ID=gene-E3V42_09525;Name=E3V42_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09525 SOQV01000090.1 Protein Homology CDS 17181 17657 . - 0 ID=cds-TMR82771.1;Parent=gene-E3V42_09525;Dbxref=NCBI_GP:TMR82771.1;Name=TMR82771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445251.1;locus_tag=E3V42_09525;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=TMR82771.1;transl_table=11 SOQV01000090.1 Genbank gene 17654 19441 . - . ID=gene-E3V42_09530;Name=E3V42_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09530 SOQV01000090.1 Protein Homology CDS 17654 19441 . - 0 ID=cds-TMR82772.1;Parent=gene-E3V42_09530;Dbxref=NCBI_GP:TMR82772.1;Name=TMR82772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357653.1;locus_tag=E3V42_09530;product=beta-galactosidase;protein_id=TMR82772.1;transl_table=11 SOQV01000090.1 Genbank gene 19746 20504 . + . ID=gene-E3V42_09535;Name=E3V42_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09535 SOQV01000090.1 Protein Homology CDS 19746 20504 . + 0 ID=cds-TMR82773.1;Parent=gene-E3V42_09535;Dbxref=NCBI_GP:TMR82773.1;Name=TMR82773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357652.1;locus_tag=E3V42_09535;product=GntR family transcriptional regulator;protein_id=TMR82773.1;transl_table=11 SOQV01000090.1 Genbank gene 20820 24749 . + . ID=gene-E3V42_09540;Name=E3V42_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09540 SOQV01000090.1 Protein Homology CDS 20820 24749 . + 0 ID=cds-TMR82774.1;Parent=gene-E3V42_09540;Dbxref=NCBI_GP:TMR82774.1;Name=TMR82774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357651.1;locus_tag=E3V42_09540;product=YSIRK-type signal peptide-containing protein;protein_id=TMR82774.1;transl_table=11 SOQV01000090.1 Genbank gene 24804 26102 . - . ID=gene-E3V42_09545;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=E3V42_09545 SOQV01000090.1 Protein Homology CDS 24804 26102 . - 0 ID=cds-TMR82775.1;Parent=gene-E3V42_09545;Dbxref=NCBI_GP:TMR82775.1;Name=TMR82775.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357650.1;locus_tag=E3V42_09545;product=adenylosuccinate lyase;protein_id=TMR82775.1;transl_table=11 SOQV01000090.1 Genbank gene 26165 26392 . - . ID=gene-E3V42_09550;Name=E3V42_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09550 SOQV01000090.1 Protein Homology CDS 26165 26392 . - 0 ID=cds-TMR82776.1;Parent=gene-E3V42_09550;Dbxref=NCBI_GP:TMR82776.1;Name=TMR82776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357649.1;locus_tag=E3V42_09550;product=phosphoribosylaminoimidazole carboxylase;protein_id=TMR82776.1;transl_table=11 SOQV01000090.1 Genbank gene 26402 27493 . - . ID=gene-E3V42_09555;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=E3V42_09555 SOQV01000090.1 Protein Homology CDS 26402 27493 . - 0 ID=cds-TMR82777.1;Parent=gene-E3V42_09555;Dbxref=NCBI_GP:TMR82777.1;Name=TMR82777.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099033.1;locus_tag=E3V42_09555;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=TMR82777.1;transl_table=11 SOQV01000090.1 Genbank gene 27480 27971 . - . ID=gene-E3V42_09560;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=E3V42_09560 SOQV01000090.1 Protein Homology CDS 27480 27971 . - 0 ID=cds-TMR82778.1;Parent=gene-E3V42_09560;Dbxref=NCBI_GP:TMR82778.1;Name=TMR82778.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445245.1;locus_tag=E3V42_09560;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=TMR82778.1;transl_table=11 SOQV01000090.1 Genbank gene 28165 29427 . - . ID=gene-E3V42_09565;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=E3V42_09565 SOQV01000090.1 Protein Homology CDS 28165 29427 . - 0 ID=cds-TMR82779.1;Parent=gene-E3V42_09565;Dbxref=NCBI_GP:TMR82779.1;Name=TMR82779.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357646.1;locus_tag=E3V42_09565;product=phosphoribosylamine--glycine ligase;protein_id=TMR82779.1;transl_table=11 SOQV01000090.1 Genbank gene 29549 31096 . - . ID=gene-E3V42_09570;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=E3V42_09570 SOQV01000090.1 Protein Homology CDS 29549 31096 . - 0 ID=cds-TMR82780.1;Parent=gene-E3V42_09570;Dbxref=NCBI_GP:TMR82780.1;Name=TMR82780.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=E3V42_09570;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=TMR82780.1;transl_table=11 SOQV01000090.1 Genbank gene 31098 31562 . - . ID=gene-E3V42_09575;Name=E3V42_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09575 SOQV01000090.1 Protein Homology CDS 31098 31562 . - 0 ID=cds-TMR82781.1;Parent=gene-E3V42_09575;Dbxref=NCBI_GP:TMR82781.1;Name=TMR82781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445242.1;locus_tag=E3V42_09575;product=GNAT family N-acetyltransferase;protein_id=TMR82781.1;transl_table=11 SOQV01000090.1 Genbank gene 31606 31980 . - . ID=gene-E3V42_09580;Name=E3V42_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09580 SOQV01000090.1 Protein Homology CDS 31606 31980 . - 0 ID=cds-TMR82782.1;Parent=gene-E3V42_09580;Dbxref=NCBI_GP:TMR82782.1;Name=TMR82782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218874.1;locus_tag=E3V42_09580;product=hypothetical protein;protein_id=TMR82782.1;transl_table=11 SOQV01000090.1 Genbank gene 31977 32531 . - . ID=gene-E3V42_09585;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=E3V42_09585 SOQV01000090.1 Protein Homology CDS 31977 32531 . - 0 ID=cds-TMR82783.1;Parent=gene-E3V42_09585;Dbxref=NCBI_GP:TMR82783.1;Name=TMR82783.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717485.1;locus_tag=E3V42_09585;product=phosphoribosylglycinamide formyltransferase;protein_id=TMR82783.1;transl_table=11 SOQV01000090.1 Genbank gene 32528 33550 . - . ID=gene-E3V42_09590;Name=E3V42_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09590 SOQV01000090.1 Protein Homology CDS 32528 33550 . - 0 ID=cds-TMR82784.1;Parent=gene-E3V42_09590;Dbxref=NCBI_GP:TMR82784.1;Name=TMR82784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445240.1;locus_tag=E3V42_09590;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=TMR82784.1;transl_table=11 SOQV01000090.1 Genbank gene 33768 35210 . - . ID=gene-E3V42_09595;Name=E3V42_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09595 SOQV01000090.1 Protein Homology CDS 33768 35210 . - 0 ID=cds-TMR82785.1;Parent=gene-E3V42_09595;Dbxref=NCBI_GP:TMR82785.1;Name=TMR82785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445239.1;locus_tag=E3V42_09595;product=amidophosphoribosyltransferase;protein_id=TMR82785.1;transl_table=11 SOQV01000090.1 Genbank gene 35304 39029 . - . ID=gene-E3V42_09600;Name=E3V42_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09600 SOQV01000090.1 Protein Homology CDS 35304 39029 . - 0 ID=cds-TMR82786.1;Parent=gene-E3V42_09600;Dbxref=NCBI_GP:TMR82786.1;Name=TMR82786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445238.1;locus_tag=E3V42_09600;product=phosphoribosylformylglycinamidine synthase;protein_id=TMR82786.1;transl_table=11 SOQV01000090.1 Genbank gene 39086 39835 . - . ID=gene-E3V42_09605;Name=E3V42_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09605 SOQV01000090.1 Protein Homology CDS 39086 39835 . - 0 ID=cds-TMR82787.1;Parent=gene-E3V42_09605;Dbxref=NCBI_GP:TMR82787.1;Name=TMR82787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357639.1;locus_tag=E3V42_09605;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TMR82787.1;transl_table=11 SOQV01000090.1 Genbank gene 39963 41312 . - . ID=gene-E3V42_09610;Name=E3V42_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09610 SOQV01000090.1 Protein Homology CDS 39963 41312 . - 0 ID=cds-TMR82788.1;Parent=gene-E3V42_09610;Dbxref=NCBI_GP:TMR82788.1;Name=TMR82788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445236.1;locus_tag=E3V42_09610;product=HlyD family secretion protein;protein_id=TMR82788.1;transl_table=11 SOQV01000090.1 Genbank gene 41325 43478 . - . ID=gene-E3V42_09615;Name=E3V42_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09615 SOQV01000090.1 Protein Homology CDS 41325 43478 . - 0 ID=cds-TMR82789.1;Parent=gene-E3V42_09615;Dbxref=NCBI_GP:TMR82789.1;Name=TMR82789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445235.1;locus_tag=E3V42_09615;product=peptide cleavage/export ABC transporter;protein_id=TMR82789.1;transl_table=11 SOQV01000090.1 Genbank gene 43860 44351 . - . ID=gene-E3V42_09620;Name=E3V42_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09620 SOQV01000090.1 Protein Homology CDS 43860 44351 . - 0 ID=cds-TMR82790.1;Parent=gene-E3V42_09620;Dbxref=NCBI_GP:TMR82790.1;Name=TMR82790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671992.1;locus_tag=E3V42_09620;product=hypothetical protein;protein_id=TMR82790.1;transl_table=11 SOQV01000090.1 Genbank gene 44332 44928 . - . ID=gene-E3V42_09625;Name=E3V42_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09625 SOQV01000090.1 Protein Homology CDS 44332 44928 . - 0 ID=cds-TMR82791.1;Parent=gene-E3V42_09625;Dbxref=NCBI_GP:TMR82791.1;Name=TMR82791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687786.1;locus_tag=E3V42_09625;product=ATP-binding cassette domain-containing protein;protein_id=TMR82791.1;transl_table=11 SOQV01000090.1 Genbank gene 44925 45407 . - . ID=gene-E3V42_09630;Name=E3V42_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09630 SOQV01000090.1 Protein Homology CDS 44925 45407 . - 0 ID=cds-TMR82792.1;Parent=gene-E3V42_09630;Dbxref=NCBI_GP:TMR82792.1;Name=TMR82792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232094.1;locus_tag=E3V42_09630;product=hypothetical protein;protein_id=TMR82792.1;transl_table=11 SOQV01000090.1 Genbank gene 45404 46540 . - . ID=gene-E3V42_09635;Name=E3V42_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09635 SOQV01000090.1 Protein Homology CDS 45404 46540 . - 0 ID=cds-TMR82793.1;Parent=gene-E3V42_09635;Dbxref=NCBI_GP:TMR82793.1;Name=TMR82793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698829.1;locus_tag=E3V42_09635;product=hypothetical protein;protein_id=TMR82793.1;transl_table=11 SOQV01000090.1 Genbank gene 46547 46843 . - . ID=gene-E3V42_09640;Name=E3V42_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09640 SOQV01000090.1 Protein Homology CDS 46547 46843 . - 0 ID=cds-TMR82794.1;Parent=gene-E3V42_09640;Dbxref=NCBI_GP:TMR82794.1;Name=TMR82794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837727.1;locus_tag=E3V42_09640;product=circular bacteriocin%2C circularin A/uberolysin family;protein_id=TMR82794.1;transl_table=11 ##sequence-region SOQV01000091.1 1 759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000091.1 Genbank region 1 759 . + . ID=SOQV01000091.1:1..759;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 ##sequence-region SOQV01000092.1 1 8177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000092.1 Genbank region 1 8177 . + . ID=SOQV01000092.1:1..8177;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000092.1 Genbank gene 27 142 . + . ID=gene-E3V42_09645;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V42_09645 SOQV01000092.1 cmsearch rRNA 27 142 . + . ID=rna-E3V42_09645;Parent=gene-E3V42_09645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09645;product=5S ribosomal RNA SOQV01000092.1 cmsearch exon 27 142 . + . ID=exon-E3V42_09645-1;Parent=rna-E3V42_09645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09645;product=5S ribosomal RNA SOQV01000092.1 Genbank gene 147 219 . + . ID=gene-E3V42_09650;Name=E3V42_09650;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09650 SOQV01000092.1 tRNAscan-SE tRNA 147 219 . + . ID=rna-E3V42_09650;Parent=gene-E3V42_09650;anticodon=(pos:180..182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09650;product=tRNA-Val SOQV01000092.1 tRNAscan-SE exon 147 219 . + . ID=exon-E3V42_09650-1;Parent=rna-E3V42_09650;anticodon=(pos:180..182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09650;product=tRNA-Val SOQV01000092.1 Genbank gene 225 295 . + . ID=gene-E3V42_09655;Name=E3V42_09655;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09655 SOQV01000092.1 tRNAscan-SE tRNA 225 295 . + . ID=rna-E3V42_09655;Parent=gene-E3V42_09655;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09655;product=tRNA-Gly SOQV01000092.1 tRNAscan-SE exon 225 295 . + . ID=exon-E3V42_09655-1;Parent=rna-E3V42_09655;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09655;product=tRNA-Gly SOQV01000092.1 Genbank gene 329 402 . + . ID=gene-E3V42_09660;Name=E3V42_09660;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09660 SOQV01000092.1 tRNAscan-SE tRNA 329 402 . + . ID=rna-E3V42_09660;Parent=gene-E3V42_09660;anticodon=(pos:363..365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09660;product=tRNA-Ile SOQV01000092.1 tRNAscan-SE exon 329 402 . + . ID=exon-E3V42_09660-1;Parent=rna-E3V42_09660;anticodon=(pos:363..365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09660;product=tRNA-Ile SOQV01000092.1 Genbank gene 485 574 . + . ID=gene-E3V42_09665;Name=E3V42_09665;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09665 SOQV01000092.1 tRNAscan-SE tRNA 485 574 . + . ID=rna-E3V42_09665;Parent=gene-E3V42_09665;anticodon=(pos:521..523);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09665;product=tRNA-Ser SOQV01000092.1 tRNAscan-SE exon 485 574 . + . ID=exon-E3V42_09665-1;Parent=rna-E3V42_09665;anticodon=(pos:521..523);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09665;product=tRNA-Ser SOQV01000092.1 Genbank gene 585 658 . + . ID=gene-E3V42_09670;Name=E3V42_09670;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09670 SOQV01000092.1 tRNAscan-SE tRNA 585 658 . + . ID=rna-E3V42_09670;Parent=gene-E3V42_09670;anticodon=(pos:619..621);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09670;product=tRNA-Met SOQV01000092.1 tRNAscan-SE exon 585 658 . + . ID=exon-E3V42_09670-1;Parent=rna-E3V42_09670;anticodon=(pos:619..621);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09670;product=tRNA-Met SOQV01000092.1 Genbank gene 662 734 . + . ID=gene-E3V42_09675;Name=E3V42_09675;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09675 SOQV01000092.1 tRNAscan-SE tRNA 662 734 . + . ID=rna-E3V42_09675;Parent=gene-E3V42_09675;anticodon=(pos:695..697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09675;product=tRNA-Phe SOQV01000092.1 tRNAscan-SE exon 662 734 . + . ID=exon-E3V42_09675-1;Parent=rna-E3V42_09675;anticodon=(pos:695..697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09675;product=tRNA-Phe SOQV01000092.1 Genbank gene 747 827 . + . ID=gene-E3V42_09680;Name=E3V42_09680;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09680 SOQV01000092.1 tRNAscan-SE tRNA 747 827 . + . ID=rna-E3V42_09680;Parent=gene-E3V42_09680;anticodon=(pos:781..783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09680;product=tRNA-Tyr SOQV01000092.1 tRNAscan-SE exon 747 827 . + . ID=exon-E3V42_09680-1;Parent=rna-E3V42_09680;anticodon=(pos:781..783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09680;product=tRNA-Tyr SOQV01000092.1 Genbank gene 832 902 . + . ID=gene-E3V42_09685;Name=E3V42_09685;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09685 SOQV01000092.1 tRNAscan-SE tRNA 832 902 . + . ID=rna-E3V42_09685;Parent=gene-E3V42_09685;anticodon=(pos:864..866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09685;product=tRNA-Trp SOQV01000092.1 tRNAscan-SE exon 832 902 . + . ID=exon-E3V42_09685-1;Parent=rna-E3V42_09685;anticodon=(pos:864..866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09685;product=tRNA-Trp SOQV01000092.1 Genbank gene 917 989 . + . ID=gene-E3V42_09690;Name=E3V42_09690;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09690 SOQV01000092.1 tRNAscan-SE tRNA 917 989 . + . ID=rna-E3V42_09690;Parent=gene-E3V42_09690;anticodon=(pos:950..952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09690;product=tRNA-His SOQV01000092.1 tRNAscan-SE exon 917 989 . + . ID=exon-E3V42_09690-1;Parent=rna-E3V42_09690;anticodon=(pos:950..952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09690;product=tRNA-His SOQV01000092.1 Genbank gene 1003 1074 . + . ID=gene-E3V42_09695;Name=E3V42_09695;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09695 SOQV01000092.1 tRNAscan-SE tRNA 1003 1074 . + . ID=rna-E3V42_09695;Parent=gene-E3V42_09695;anticodon=(pos:1035..1037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09695;product=tRNA-Gln SOQV01000092.1 tRNAscan-SE exon 1003 1074 . + . ID=exon-E3V42_09695-1;Parent=rna-E3V42_09695;anticodon=(pos:1035..1037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09695;product=tRNA-Gln SOQV01000092.1 Genbank gene 1084 1167 . + . ID=gene-E3V42_09700;Name=E3V42_09700;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09700 SOQV01000092.1 tRNAscan-SE tRNA 1084 1167 . + . ID=rna-E3V42_09700;Parent=gene-E3V42_09700;anticodon=(pos:1118..1120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09700;product=tRNA-Leu SOQV01000092.1 tRNAscan-SE exon 1084 1167 . + . ID=exon-E3V42_09700-1;Parent=rna-E3V42_09700;anticodon=(pos:1118..1120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09700;product=tRNA-Leu SOQV01000092.1 Genbank gene 1274 2551 . + . ID=gene-E3V42_09705;Name=E3V42_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09705 SOQV01000092.1 Protein Homology CDS 1274 2551 . + 0 ID=cds-TMR82566.1;Parent=gene-E3V42_09705;Dbxref=NCBI_GP:TMR82566.1;Name=TMR82566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359470.1;locus_tag=E3V42_09705;product=gamma-glutamylcysteine synthetase;protein_id=TMR82566.1;transl_table=11 SOQV01000092.1 Genbank gene 2628 4112 . + . ID=gene-E3V42_09710;Name=E3V42_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09710 SOQV01000092.1 Protein Homology CDS 2628 4112 . + 0 ID=cds-TMR82567.1;Parent=gene-E3V42_09710;Dbxref=NCBI_GP:TMR82567.1;Name=TMR82567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445346.1;locus_tag=E3V42_09710;product=threonine synthase;protein_id=TMR82567.1;transl_table=11 SOQV01000092.1 Genbank gene 4173 5453 . + . ID=gene-E3V42_09715;Name=E3V42_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09715 SOQV01000092.1 Protein Homology CDS 4173 5453 . + 0 ID=cds-TMR82568.1;Parent=gene-E3V42_09715;Dbxref=NCBI_GP:TMR82568.1;Name=TMR82568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359468.1;locus_tag=E3V42_09715;product=MATE family efflux transporter;protein_id=TMR82568.1;transl_table=11 SOQV01000092.1 Genbank gene 5457 6080 . + . ID=gene-E3V42_09720;Name=E3V42_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09720 SOQV01000092.1 Protein Homology CDS 5457 6080 . + 0 ID=cds-TMR82569.1;Parent=gene-E3V42_09720;Dbxref=NCBI_GP:TMR82569.1;Name=TMR82569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445348.1;locus_tag=E3V42_09720;product=HAD family hydrolase;protein_id=TMR82569.1;transl_table=11 SOQV01000092.1 Genbank gene 6243 7421 . + . ID=gene-E3V42_09725;Name=E3V42_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09725 SOQV01000092.1 Protein Homology CDS 6243 7421 . + 0 ID=cds-TMR82570.1;Parent=gene-E3V42_09725;Dbxref=NCBI_GP:TMR82570.1;Name=TMR82570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359466.1;locus_tag=E3V42_09725;product=LysM peptidoglycan-binding domain-containing protein;protein_id=TMR82570.1;transl_table=11 SOQV01000092.1 Genbank gene 7693 8177 . - . ID=gene-E3V42_09730;Name=E3V42_09730;end_range=8177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09730;partial=true SOQV01000092.1 Protein Homology CDS 7693 8177 . - 2 ID=cds-TMR82571.1;Parent=gene-E3V42_09730;Dbxref=NCBI_GP:TMR82571.1;Name=TMR82571.1;end_range=8177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_09730;partial=true;product=IS630 family transposase;protein_id=TMR82571.1;transl_table=11 ##sequence-region SOQV01000093.1 1 27787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000093.1 Genbank region 1 27787 . + . ID=SOQV01000093.1:1..27787;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000093.1 Genbank gene 1 253 . - . ID=gene-E3V42_09735;Name=E3V42_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09735;partial=true;start_range=.,1 SOQV01000093.1 GeneMarkS-2+ CDS 1 253 . - 0 ID=cds-TMR82532.1;Parent=gene-E3V42_09735;Dbxref=NCBI_GP:TMR82532.1;Name=TMR82532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_09735;partial=true;product=IS630 family transposase;protein_id=TMR82532.1;start_range=.,1;transl_table=11 SOQV01000093.1 Genbank gene 240 566 . - . ID=gene-E3V42_09740;Name=E3V42_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09740 SOQV01000093.1 Protein Homology CDS 240 566 . - 0 ID=cds-TMR82533.1;Parent=gene-E3V42_09740;Dbxref=NCBI_GP:TMR82533.1;Name=TMR82533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_09740;product=transposase;protein_id=TMR82533.1;transl_table=11 SOQV01000093.1 Genbank gene 630 752 . + . ID=gene-E3V42_09745;Name=E3V42_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09745 SOQV01000093.1 Protein Homology CDS 630 752 . + 0 ID=cds-TMR82556.1;Parent=gene-E3V42_09745;Dbxref=NCBI_GP:TMR82556.1;Name=TMR82556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284936.1;locus_tag=E3V42_09745;product=choline-binding protein A;protein_id=TMR82556.1;transl_table=11 SOQV01000093.1 Genbank pseudogene 969 1271 . + . ID=gene-E3V42_09750;Name=E3V42_09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09750;pseudo=true SOQV01000093.1 Protein Homology CDS 969 1271 . + 0 ID=cds-E3V42_09750;Parent=gene-E3V42_09750;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445695.1;locus_tag=E3V42_09750;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 SOQV01000093.1 Genbank gene 1456 1830 . + . ID=gene-E3V42_09755;Name=E3V42_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09755 SOQV01000093.1 Protein Homology CDS 1456 1830 . + 0 ID=cds-TMR82534.1;Parent=gene-E3V42_09755;Dbxref=NCBI_GP:TMR82534.1;Name=TMR82534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445693.1;locus_tag=E3V42_09755;product=CidA/LrgA family protein;protein_id=TMR82534.1;transl_table=11 SOQV01000093.1 Genbank gene 1827 2522 . + . ID=gene-E3V42_09760;Name=E3V42_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09760 SOQV01000093.1 Protein Homology CDS 1827 2522 . + 0 ID=cds-TMR82535.1;Parent=gene-E3V42_09760;Dbxref=NCBI_GP:TMR82535.1;Name=TMR82535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445694.1;locus_tag=E3V42_09760;product=LrgB family protein;protein_id=TMR82535.1;transl_table=11 SOQV01000093.1 Genbank gene 3465 4661 . - . ID=gene-E3V42_09765;Name=E3V42_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09765 SOQV01000093.1 Protein Homology CDS 3465 4661 . - 0 ID=cds-TMR82536.1;Parent=gene-E3V42_09765;Dbxref=NCBI_GP:TMR82536.1;Name=TMR82536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359154.1;locus_tag=E3V42_09765;product=ABC transporter permease;protein_id=TMR82536.1;transl_table=11 SOQV01000093.1 Genbank gene 4658 5551 . - . ID=gene-E3V42_09770;Name=E3V42_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09770 SOQV01000093.1 Protein Homology CDS 4658 5551 . - 0 ID=cds-TMR82537.1;Parent=gene-E3V42_09770;Dbxref=NCBI_GP:TMR82537.1;Name=TMR82537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359155.1;locus_tag=E3V42_09770;product=ABC transporter ATP-binding protein;protein_id=TMR82537.1;transl_table=11 SOQV01000093.1 Genbank gene 5614 5865 . + . ID=gene-E3V42_09775;Name=E3V42_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09775 SOQV01000093.1 Protein Homology CDS 5614 5865 . + 0 ID=cds-TMR82538.1;Parent=gene-E3V42_09775;Dbxref=NCBI_GP:TMR82538.1;Name=TMR82538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1%2CRefSeq:WP_001846503.1;locus_tag=E3V42_09775;product=hypothetical protein;protein_id=TMR82538.1;transl_table=11 SOQV01000093.1 Genbank pseudogene 6012 6191 . - . ID=gene-E3V42_09780;Name=E3V42_09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09780;pseudo=true SOQV01000093.1 Protein Homology CDS 6012 6191 . - 0 ID=cds-E3V42_09780;Parent=gene-E3V42_09780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841575.1;locus_tag=E3V42_09780;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000093.1 Genbank pseudogene 6233 6464 . + . ID=gene-E3V42_09785;Name=E3V42_09785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09785;pseudo=true SOQV01000093.1 Protein Homology CDS 6233 6464 . + 0 ID=cds-E3V42_09785;Parent=gene-E3V42_09785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=E3V42_09785;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000093.1 Genbank gene 6867 7484 . + . ID=gene-E3V42_09790;Name=E3V42_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09790 SOQV01000093.1 Protein Homology CDS 6867 7484 . + 0 ID=cds-TMR82539.1;Parent=gene-E3V42_09790;Dbxref=NCBI_GP:TMR82539.1;Name=TMR82539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446715.1;locus_tag=E3V42_09790;product=TVP38/TMEM64 family protein;protein_id=TMR82539.1;transl_table=11 SOQV01000093.1 Genbank gene 7527 8414 . - . ID=gene-E3V42_09795;Name=E3V42_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09795 SOQV01000093.1 Protein Homology CDS 7527 8414 . - 0 ID=cds-TMR82540.1;Parent=gene-E3V42_09795;Dbxref=NCBI_GP:TMR82540.1;Name=TMR82540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446716.1;locus_tag=E3V42_09795;product=ROK family protein;protein_id=TMR82540.1;transl_table=11 SOQV01000093.1 Genbank gene 8563 10449 . - . ID=gene-E3V42_09800;Name=E3V42_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09800 SOQV01000093.1 Protein Homology CDS 8563 10449 . - 0 ID=cds-TMR82541.1;Parent=gene-E3V42_09800;Dbxref=NCBI_GP:TMR82541.1;Name=TMR82541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064575.1;locus_tag=E3V42_09800;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=TMR82541.1;transl_table=11 SOQV01000093.1 Genbank gene 10818 12272 . + . ID=gene-E3V42_09805;Name=E3V42_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09805 SOQV01000093.1 Protein Homology CDS 10818 12272 . + 0 ID=cds-TMR82542.1;Parent=gene-E3V42_09805;Dbxref=NCBI_GP:TMR82542.1;Name=TMR82542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446718.1;locus_tag=E3V42_09805;product=glycoside hydrolase family 32 protein;protein_id=TMR82542.1;transl_table=11 SOQV01000093.1 Genbank gene 12253 13218 . + . ID=gene-E3V42_09810;Name=E3V42_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09810 SOQV01000093.1 Protein Homology CDS 12253 13218 . + 0 ID=cds-TMR82543.1;Parent=gene-E3V42_09810;Dbxref=NCBI_GP:TMR82543.1;Name=TMR82543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446719.1;locus_tag=E3V42_09810;product=LacI family transcriptional regulator;protein_id=TMR82543.1;transl_table=11 SOQV01000093.1 Genbank gene 13254 14528 . - . ID=gene-E3V42_09815;Name=E3V42_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09815 SOQV01000093.1 Protein Homology CDS 13254 14528 . - 0 ID=cds-TMR82544.1;Parent=gene-E3V42_09815;Dbxref=NCBI_GP:TMR82544.1;Name=TMR82544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359162.1;locus_tag=E3V42_09815;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=TMR82544.1;transl_table=11 SOQV01000093.1 Genbank gene 14528 15724 . - . ID=gene-E3V42_09820;Name=E3V42_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09820 SOQV01000093.1 Protein Homology CDS 14528 15724 . - 0 ID=cds-TMR82545.1;Parent=gene-E3V42_09820;Dbxref=NCBI_GP:TMR82545.1;Name=TMR82545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359163.1;locus_tag=E3V42_09820;product=hydroxymethylglutaryl-CoA synthase;protein_id=TMR82545.1;transl_table=11 SOQV01000093.1 Genbank gene 15831 16118 . - . ID=gene-E3V42_09825;Name=E3V42_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09825 SOQV01000093.1 Protein Homology CDS 15831 16118 . - 0 ID=cds-TMR82557.1;Parent=gene-E3V42_09825;Dbxref=NCBI_GP:TMR82557.1;Name=TMR82557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359164.1;locus_tag=E3V42_09825;product=hypothetical protein;protein_id=TMR82557.1;transl_table=11 SOQV01000093.1 Genbank gene 16240 16689 . - . ID=gene-E3V42_09830;Name=E3V42_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09830 SOQV01000093.1 Protein Homology CDS 16240 16689 . - 0 ID=cds-TMR82546.1;Parent=gene-E3V42_09830;Dbxref=NCBI_GP:TMR82546.1;Name=TMR82546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359167.1;locus_tag=E3V42_09830;product=threonine/serine exporter family protein;protein_id=TMR82546.1;transl_table=11 SOQV01000093.1 Genbank gene 16691 17449 . - . ID=gene-E3V42_09835;Name=E3V42_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09835 SOQV01000093.1 Protein Homology CDS 16691 17449 . - 0 ID=cds-TMR82547.1;Parent=gene-E3V42_09835;Dbxref=NCBI_GP:TMR82547.1;Name=TMR82547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359168.1;locus_tag=E3V42_09835;product=threonine/serine exporter;protein_id=TMR82547.1;transl_table=11 SOQV01000093.1 Genbank gene 17564 19543 . - . ID=gene-E3V42_09840;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=E3V42_09840 SOQV01000093.1 Protein Homology CDS 17564 19543 . - 0 ID=cds-TMR82548.1;Parent=gene-E3V42_09840;Dbxref=NCBI_GP:TMR82548.1;Name=TMR82548.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359169.1;locus_tag=E3V42_09840;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=TMR82548.1;transl_table=11 SOQV01000093.1 Genbank gene 19540 20280 . - . ID=gene-E3V42_09845;Name=E3V42_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09845 SOQV01000093.1 Protein Homology CDS 19540 20280 . - 0 ID=cds-TMR82549.1;Parent=gene-E3V42_09845;Dbxref=NCBI_GP:TMR82549.1;Name=TMR82549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359170.1;locus_tag=E3V42_09845;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=TMR82549.1;transl_table=11 SOQV01000093.1 Genbank gene 20295 21611 . - . ID=gene-E3V42_09850;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=E3V42_09850 SOQV01000093.1 Protein Homology CDS 20295 21611 . - 0 ID=cds-TMR82550.1;Parent=gene-E3V42_09850;Dbxref=NCBI_GP:TMR82550.1;Name=TMR82550.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359171.1;locus_tag=E3V42_09850;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=TMR82550.1;transl_table=11 SOQV01000093.1 Genbank gene 21601 22536 . - . ID=gene-E3V42_09855;Name=E3V42_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09855 SOQV01000093.1 Protein Homology CDS 21601 22536 . - 0 ID=cds-TMR82551.1;Parent=gene-E3V42_09855;Dbxref=NCBI_GP:TMR82551.1;Name=TMR82551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446727.1;locus_tag=E3V42_09855;product=methionyl-tRNA formyltransferase;protein_id=TMR82551.1;transl_table=11 SOQV01000093.1 Genbank gene 22549 24945 . - . ID=gene-E3V42_09860;Name=E3V42_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09860 SOQV01000093.1 Protein Homology CDS 22549 24945 . - 0 ID=cds-TMR82552.1;Parent=gene-E3V42_09860;Dbxref=NCBI_GP:TMR82552.1;Name=TMR82552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446728.1;locus_tag=E3V42_09860;product=primosomal protein N';protein_id=TMR82552.1;transl_table=11 SOQV01000093.1 Genbank gene 25011 25325 . - . ID=gene-E3V42_09865;Name=E3V42_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09865 SOQV01000093.1 Protein Homology CDS 25011 25325 . - 0 ID=cds-TMR82553.1;Parent=gene-E3V42_09865;Dbxref=NCBI_GP:TMR82553.1;Name=TMR82553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359174.1;locus_tag=E3V42_09865;product=DNA-directed RNA polymerase subunit omega;protein_id=TMR82553.1;transl_table=11 SOQV01000093.1 Genbank gene 25350 25976 . - . ID=gene-E3V42_09870;Name=E3V42_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09870 SOQV01000093.1 Protein Homology CDS 25350 25976 . - 0 ID=cds-TMR82554.1;Parent=gene-E3V42_09870;Dbxref=NCBI_GP:TMR82554.1;Name=TMR82554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446730.1;locus_tag=E3V42_09870;product=guanylate kinase;protein_id=TMR82554.1;transl_table=11 SOQV01000093.1 Genbank gene 26267 27418 . + . ID=gene-E3V42_09875;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=E3V42_09875 SOQV01000093.1 Protein Homology CDS 26267 27418 . + 0 ID=cds-TMR82555.1;Parent=gene-E3V42_09875;Dbxref=NCBI_GP:TMR82555.1;Name=TMR82555.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359458.1;locus_tag=E3V42_09875;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TMR82555.1;transl_table=11 SOQV01000093.1 Genbank pseudogene 27635 27787 . - . ID=gene-E3V42_09880;Name=E3V42_09880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09880;pseudo=true SOQV01000093.1 Protein Homology CDS 27635 27787 . - 0 ID=cds-E3V42_09880;Parent=gene-E3V42_09880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=E3V42_09880;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000094.1 1 11941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000094.1 Genbank region 1 11941 . + . ID=SOQV01000094.1:1..11941;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000094.1 Genbank gene 27 142 . + . ID=gene-E3V42_09885;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=E3V42_09885 SOQV01000094.1 cmsearch rRNA 27 142 . + . ID=rna-E3V42_09885;Parent=gene-E3V42_09885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09885;product=5S ribosomal RNA SOQV01000094.1 cmsearch exon 27 142 . + . ID=exon-E3V42_09885-1;Parent=rna-E3V42_09885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09885;product=5S ribosomal RNA SOQV01000094.1 Genbank gene 148 221 . + . ID=gene-E3V42_09890;Name=E3V42_09890;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_09890 SOQV01000094.1 tRNAscan-SE tRNA 148 221 . + . ID=rna-E3V42_09890;Parent=gene-E3V42_09890;anticodon=(pos:182..184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09890;product=tRNA-Asn SOQV01000094.1 tRNAscan-SE exon 148 221 . + . ID=exon-E3V42_09890-1;Parent=rna-E3V42_09890;anticodon=(pos:182..184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_09890;product=tRNA-Asn SOQV01000094.1 Genbank pseudogene 369 497 . - . ID=gene-E3V42_09895;Name=E3V42_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09895;pseudo=true SOQV01000094.1 Protein Homology CDS 369 497 . - 0 ID=cds-E3V42_09895;Parent=gene-E3V42_09895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=E3V42_09895;product=ISL3 family transposase;pseudo=true;transl_table=11 SOQV01000094.1 Genbank gene 496 1014 . - . ID=gene-E3V42_09900;Name=E3V42_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09900 SOQV01000094.1 Protein Homology CDS 496 1014 . - 0 ID=cds-TMR82519.1;Parent=gene-E3V42_09900;Dbxref=NCBI_GP:TMR82519.1;Name=TMR82519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=E3V42_09900;product=IS630 family transposase;protein_id=TMR82519.1;transl_table=11 SOQV01000094.1 Genbank gene 1001 1327 . - . ID=gene-E3V42_09905;Name=E3V42_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09905 SOQV01000094.1 Protein Homology CDS 1001 1327 . - 0 ID=cds-TMR82520.1;Parent=gene-E3V42_09905;Dbxref=NCBI_GP:TMR82520.1;Name=TMR82520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=E3V42_09905;product=transposase;protein_id=TMR82520.1;transl_table=11 SOQV01000094.1 Genbank gene 1600 1836 . + . ID=gene-E3V42_09910;Name=E3V42_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09910 SOQV01000094.1 Protein Homology CDS 1600 1836 . + 0 ID=cds-TMR82521.1;Parent=gene-E3V42_09910;Dbxref=NCBI_GP:TMR82521.1;Name=TMR82521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445191.1;locus_tag=E3V42_09910;product=recombinase RecX;protein_id=TMR82521.1;transl_table=11 SOQV01000094.1 Genbank gene 2067 3353 . + . ID=gene-E3V42_09915;Name=E3V42_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09915 SOQV01000094.1 Protein Homology CDS 2067 3353 . + 0 ID=cds-TMR82530.1;Parent=gene-E3V42_09915;Dbxref=NCBI_GP:TMR82530.1;Name=TMR82530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357615.1;locus_tag=E3V42_09915;product=adenylosuccinate synthase;protein_id=TMR82530.1;transl_table=11 SOQV01000094.1 Genbank gene 3553 4020 . + . ID=gene-E3V42_09920;Name=E3V42_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09920 SOQV01000094.1 Protein Homology CDS 3553 4020 . + 0 ID=cds-TMR82522.1;Parent=gene-E3V42_09920;Dbxref=NCBI_GP:TMR82522.1;Name=TMR82522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357616.1;locus_tag=E3V42_09920;product=nucleoside deaminase;protein_id=TMR82522.1;transl_table=11 SOQV01000094.1 Genbank gene 4053 4150 . + . ID=gene-E3V42_09925;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=E3V42_09925 SOQV01000094.1 cmsearch SRP_RNA 4053 4150 . + . ID=rna-E3V42_09925;Parent=gene-E3V42_09925;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09925;product=signal recognition particle sRNA small type SOQV01000094.1 cmsearch exon 4053 4150 . + . ID=exon-E3V42_09925-1;Parent=rna-E3V42_09925;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=E3V42_09925;product=signal recognition particle sRNA small type SOQV01000094.1 Genbank gene 4207 4650 . + . ID=gene-E3V42_09930;Name=E3V42_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09930 SOQV01000094.1 Protein Homology CDS 4207 4650 . + 0 ID=cds-TMR82531.1;Parent=gene-E3V42_09930;Dbxref=NCBI_GP:TMR82531.1;Name=TMR82531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445194.1;locus_tag=E3V42_09930;product=dUTP diphosphatase;protein_id=TMR82531.1;transl_table=11 SOQV01000094.1 Genbank gene 4589 5167 . + . ID=gene-E3V42_09935;Name=E3V42_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09935 SOQV01000094.1 Protein Homology CDS 4589 5167 . + 0 ID=cds-TMR82523.1;Parent=gene-E3V42_09935;Dbxref=NCBI_GP:TMR82523.1;Name=TMR82523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357618.1;locus_tag=E3V42_09935;product=histidine phosphatase family protein;protein_id=TMR82523.1;transl_table=11 SOQV01000094.1 Genbank gene 5181 6542 . + . ID=gene-E3V42_09940;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=E3V42_09940 SOQV01000094.1 Protein Homology CDS 5181 6542 . + 0 ID=cds-TMR82524.1;Parent=gene-E3V42_09940;Dbxref=NCBI_GP:TMR82524.1;Name=TMR82524.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155545.1;locus_tag=E3V42_09940;product=DNA repair protein RadA;protein_id=TMR82524.1;transl_table=11 SOQV01000094.1 Genbank gene 6546 7112 . + . ID=gene-E3V42_09945;Name=E3V42_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09945 SOQV01000094.1 Protein Homology CDS 6546 7112 . + 0 ID=cds-TMR82525.1;Parent=gene-E3V42_09945;Dbxref=NCBI_GP:TMR82525.1;Name=TMR82525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357620.1;locus_tag=E3V42_09945;product=carbonic anhydrase;protein_id=TMR82525.1;transl_table=11 SOQV01000094.1 Genbank gene 7137 7952 . + . ID=gene-E3V42_09950;Name=E3V42_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09950 SOQV01000094.1 Protein Homology CDS 7137 7952 . + 0 ID=cds-TMR82526.1;Parent=gene-E3V42_09950;Dbxref=NCBI_GP:TMR82526.1;Name=TMR82526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749763.1;locus_tag=E3V42_09950;product=PrsW family intramembrane metalloprotease;protein_id=TMR82526.1;transl_table=11 SOQV01000094.1 Genbank gene 8097 9065 . + . ID=gene-E3V42_09955;Name=E3V42_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09955 SOQV01000094.1 Protein Homology CDS 8097 9065 . + 0 ID=cds-TMR82527.1;Parent=gene-E3V42_09955;Dbxref=NCBI_GP:TMR82527.1;Name=TMR82527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445201.1;locus_tag=E3V42_09955;product=ribose-phosphate diphosphokinase;protein_id=TMR82527.1;transl_table=11 SOQV01000094.1 Genbank pseudogene 9122 9969 . - . ID=gene-E3V42_09960;Name=E3V42_09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09960;pseudo=true SOQV01000094.1 Protein Homology CDS 9122 9969 . - 0 ID=cds-E3V42_09960;Parent=gene-E3V42_09960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=E3V42_09960;product=IS630 family transposase;pseudo=true;transl_table=11 SOQV01000094.1 Genbank pseudogene 10259 10447 . - . ID=gene-E3V42_09965;Name=E3V42_09965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09965;pseudo=true SOQV01000094.1 Protein Homology CDS 10259 10447 . - 0 ID=cds-E3V42_09965;Parent=gene-E3V42_09965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818994.1;locus_tag=E3V42_09965;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000094.1 Genbank gene 10654 11052 . + . ID=gene-E3V42_09970;Name=E3V42_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09970 SOQV01000094.1 Protein Homology CDS 10654 11052 . + 0 ID=cds-TMR82528.1;Parent=gene-E3V42_09970;Dbxref=NCBI_GP:TMR82528.1;Name=TMR82528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357624.1;locus_tag=E3V42_09970;product=flagellar assembly protein H domain protein;protein_id=TMR82528.1;transl_table=11 SOQV01000094.1 Genbank pseudogene 11343 11745 . + . ID=gene-E3V42_09975;Name=E3V42_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_09975;pseudo=true SOQV01000094.1 Protein Homology CDS 11343 11745 . + 0 ID=cds-E3V42_09975;Parent=gene-E3V42_09975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386827.1;locus_tag=E3V42_09975;product=IS30 family transposase;pseudo=true;transl_table=11 SOQV01000094.1 Genbank gene 11785 11941 . + . ID=gene-E3V42_09980;Name=E3V42_09980;end_range=11941,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09980;partial=true SOQV01000094.1 Protein Homology CDS 11785 11941 . + 0 ID=cds-TMR82529.1;Parent=gene-E3V42_09980;Dbxref=NCBI_GP:TMR82529.1;Name=TMR82529.1;end_range=11941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=E3V42_09980;partial=true;product=IS630 family transposase;protein_id=TMR82529.1;transl_table=11 ##sequence-region SOQV01000095.1 1 35665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000095.1 Genbank region 1 35665 . + . ID=SOQV01000095.1:1..35665;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000095.1 Genbank gene 1 89 . - . ID=gene-E3V42_09985;Name=E3V42_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09985;partial=true;start_range=.,1 SOQV01000095.1 Protein Homology CDS 1 89 . - 0 ID=cds-TMR82482.1;Parent=gene-E3V42_09985;Dbxref=NCBI_GP:TMR82482.1;Name=TMR82482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_09985;partial=true;product=IS5/IS1182 family transposase;protein_id=TMR82482.1;start_range=.,1;transl_table=11 SOQV01000095.1 Genbank gene 134 1453 . - . ID=gene-E3V42_09990;Name=E3V42_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09990 SOQV01000095.1 Protein Homology CDS 134 1453 . - 0 ID=cds-TMR82448.1;Parent=gene-E3V42_09990;Dbxref=NCBI_GP:TMR82448.1;Name=TMR82448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446478.1;locus_tag=E3V42_09990;product=CapA family protein;protein_id=TMR82448.1;transl_table=11 SOQV01000095.1 Genbank gene 1779 2390 . + . ID=gene-E3V42_09995;Name=E3V42_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_09995 SOQV01000095.1 Protein Homology CDS 1779 2390 . + 0 ID=cds-TMR82449.1;Parent=gene-E3V42_09995;Dbxref=NCBI_GP:TMR82449.1;Name=TMR82449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446479.1;locus_tag=E3V42_09995;product=peptide deformylase;protein_id=TMR82449.1;transl_table=11 SOQV01000095.1 Genbank gene 2435 3109 . + . ID=gene-E3V42_10000;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=E3V42_10000 SOQV01000095.1 Protein Homology CDS 2435 3109 . + 0 ID=cds-TMR82450.1;Parent=gene-E3V42_10000;Dbxref=NCBI_GP:TMR82450.1;Name=TMR82450.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446480.1;locus_tag=E3V42_10000;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=TMR82450.1;transl_table=11 SOQV01000095.1 Genbank pseudogene 3053 4096 . - . ID=gene-E3V42_10005;Name=E3V42_10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10005;pseudo=true SOQV01000095.1 Protein Homology CDS 3053 4096 . - 0 ID=cds-E3V42_10005;Parent=gene-E3V42_10005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445861.1;locus_tag=E3V42_10005;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 SOQV01000095.1 Genbank gene 4093 4866 . - . ID=gene-E3V42_10010;Name=E3V42_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10010 SOQV01000095.1 Protein Homology CDS 4093 4866 . - 0 ID=cds-TMR82451.1;Parent=gene-E3V42_10010;Dbxref=NCBI_GP:TMR82451.1;Name=TMR82451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445860.1;locus_tag=E3V42_10010;product=ABC transporter permease;protein_id=TMR82451.1;transl_table=11 SOQV01000095.1 Genbank gene 4863 5669 . - . ID=gene-E3V42_10015;Name=E3V42_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10015 SOQV01000095.1 Protein Homology CDS 4863 5669 . - 0 ID=cds-TMR82452.1;Parent=gene-E3V42_10015;Dbxref=NCBI_GP:TMR82452.1;Name=TMR82452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445859.1;locus_tag=E3V42_10015;product=ABC transporter permease;protein_id=TMR82452.1;transl_table=11 SOQV01000095.1 Genbank gene 5650 6807 . - . ID=gene-E3V42_10020;Name=E3V42_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10020 SOQV01000095.1 Protein Homology CDS 5650 6807 . - 0 ID=cds-TMR82453.1;Parent=gene-E3V42_10020;Dbxref=NCBI_GP:TMR82453.1;Name=TMR82453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358839.1;locus_tag=E3V42_10020;product=ABC transporter ATP-binding protein;protein_id=TMR82453.1;transl_table=11 SOQV01000095.1 Genbank gene 6967 7872 . - . ID=gene-E3V42_10025;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=E3V42_10025 SOQV01000095.1 Protein Homology CDS 6967 7872 . - 0 ID=cds-TMR82454.1;Parent=gene-E3V42_10025;Dbxref=NCBI_GP:TMR82454.1;Name=TMR82454.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445857.1;locus_tag=E3V42_10025;product=UDP-N-acetylmuramate dehydrogenase;protein_id=TMR82454.1;transl_table=11 SOQV01000095.1 Genbank gene 7988 8740 . - . ID=gene-E3V42_10030;Name=E3V42_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10030 SOQV01000095.1 Protein Homology CDS 7988 8740 . - 0 ID=cds-TMR82455.1;Parent=gene-E3V42_10030;Dbxref=NCBI_GP:TMR82455.1;Name=TMR82455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358841.1;locus_tag=E3V42_10030;product=YhfC family intramembrane metalloprotease;protein_id=TMR82455.1;transl_table=11 SOQV01000095.1 Genbank gene 8750 9481 . - . ID=gene-E3V42_10035;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=E3V42_10035 SOQV01000095.1 Protein Homology CDS 8750 9481 . - 0 ID=cds-TMR82456.1;Parent=gene-E3V42_10035;Dbxref=NCBI_GP:TMR82456.1;Name=TMR82456.1;gbkey=CDS;gene=budA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358842.1;locus_tag=E3V42_10035;product=acetolactate decarboxylase;protein_id=TMR82456.1;transl_table=11 SOQV01000095.1 Genbank pseudogene 9964 10485 . - . ID=gene-E3V42_10040;Name=E3V42_10040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10040;pseudo=true SOQV01000095.1 Protein Homology CDS 9964 10485 . - 0 ID=cds-E3V42_10040;Parent=gene-E3V42_10040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669430.1;locus_tag=E3V42_10040;product=streptococcin A-M57;pseudo=true;transl_table=11 SOQV01000095.1 Genbank gene 10903 12174 . + . ID=gene-E3V42_10045;Name=E3V42_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10045 SOQV01000095.1 Protein Homology CDS 10903 12174 . + 0 ID=cds-TMR82457.1;Parent=gene-E3V42_10045;Dbxref=NCBI_GP:TMR82457.1;Name=TMR82457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358843.1;locus_tag=E3V42_10045;product=PLP-dependent aminotransferase family protein;protein_id=TMR82457.1;transl_table=11 SOQV01000095.1 Genbank gene 12194 13009 . - . ID=gene-E3V42_10050;Name=E3V42_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10050 SOQV01000095.1 Protein Homology CDS 12194 13009 . - 0 ID=cds-TMR82458.1;Parent=gene-E3V42_10050;Dbxref=NCBI_GP:TMR82458.1;Name=TMR82458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358844.1;locus_tag=E3V42_10050;product=transporter substrate-binding domain-containing protein;protein_id=TMR82458.1;transl_table=11 SOQV01000095.1 Genbank gene 13129 13611 . - . ID=gene-E3V42_10055;Name=E3V42_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10055 SOQV01000095.1 Protein Homology CDS 13129 13611 . - 0 ID=cds-TMR82459.1;Parent=gene-E3V42_10055;Dbxref=NCBI_GP:TMR82459.1;Name=TMR82459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005727.1;locus_tag=E3V42_10055;product=NUDIX domain-containing protein;protein_id=TMR82459.1;transl_table=11 SOQV01000095.1 Genbank gene 13687 14340 . - . ID=gene-E3V42_10060;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=E3V42_10060 SOQV01000095.1 Protein Homology CDS 13687 14340 . - 0 ID=cds-TMR82460.1;Parent=gene-E3V42_10060;Dbxref=NCBI_GP:TMR82460.1;Name=TMR82460.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358845.1;locus_tag=E3V42_10060;product=phosphate signaling complex protein PhoU;protein_id=TMR82460.1;transl_table=11 SOQV01000095.1 Genbank gene 14352 15110 . - . ID=gene-E3V42_10065;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V42_10065 SOQV01000095.1 Protein Homology CDS 14352 15110 . - 0 ID=cds-TMR82461.1;Parent=gene-E3V42_10065;Dbxref=NCBI_GP:TMR82461.1;Name=TMR82461.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358846.1;locus_tag=E3V42_10065;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR82461.1;transl_table=11 SOQV01000095.1 Genbank gene 15123 15926 . - . ID=gene-E3V42_10070;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V42_10070 SOQV01000095.1 Protein Homology CDS 15123 15926 . - 0 ID=cds-TMR82462.1;Parent=gene-E3V42_10070;Dbxref=NCBI_GP:TMR82462.1;Name=TMR82462.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358847.1;locus_tag=E3V42_10070;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR82462.1;transl_table=11 SOQV01000095.1 Genbank gene 15937 16821 . - . ID=gene-E3V42_10075;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=E3V42_10075 SOQV01000095.1 Protein Homology CDS 15937 16821 . - 0 ID=cds-TMR82463.1;Parent=gene-E3V42_10075;Dbxref=NCBI_GP:TMR82463.1;Name=TMR82463.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088954.1;locus_tag=E3V42_10075;product=phosphate ABC transporter permease PstA;protein_id=TMR82463.1;transl_table=11 SOQV01000095.1 Genbank gene 16811 17728 . - . ID=gene-E3V42_10080;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=E3V42_10080 SOQV01000095.1 Protein Homology CDS 16811 17728 . - 0 ID=cds-TMR82464.1;Parent=gene-E3V42_10080;Dbxref=NCBI_GP:TMR82464.1;Name=TMR82464.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358849.1;locus_tag=E3V42_10080;product=phosphate ABC transporter permease subunit PstC;protein_id=TMR82464.1;transl_table=11 SOQV01000095.1 Genbank gene 17728 18606 . - . ID=gene-E3V42_10085;Name=E3V42_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10085 SOQV01000095.1 Protein Homology CDS 17728 18606 . - 0 ID=cds-TMR82465.1;Parent=gene-E3V42_10085;Dbxref=NCBI_GP:TMR82465.1;Name=TMR82465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358850.1;locus_tag=E3V42_10085;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=TMR82465.1;transl_table=11 SOQV01000095.1 Genbank pseudogene 18980 19112 . - . ID=gene-E3V42_10090;Name=E3V42_10090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10090;pseudo=true SOQV01000095.1 Protein Homology CDS 18980 19112 . - 0 ID=cds-E3V42_10090;Parent=gene-E3V42_10090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=E3V42_10090;product=lysyl-tRNA synthetase;pseudo=true;transl_table=11 SOQV01000095.1 Genbank gene 19292 20596 . - . ID=gene-E3V42_10095;Name=E3V42_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10095 SOQV01000095.1 Protein Homology CDS 19292 20596 . - 0 ID=cds-TMR82466.1;Parent=gene-E3V42_10095;Dbxref=NCBI_GP:TMR82466.1;Name=TMR82466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445846.1;locus_tag=E3V42_10095;product=23S rRNA methyltransferase;protein_id=TMR82466.1;transl_table=11 SOQV01000095.1 Genbank gene 20597 21370 . - . ID=gene-E3V42_10100;Name=E3V42_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10100 SOQV01000095.1 Protein Homology CDS 20597 21370 . - 0 ID=cds-TMR82467.1;Parent=gene-E3V42_10100;Dbxref=NCBI_GP:TMR82467.1;Name=TMR82467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445845.1;locus_tag=E3V42_10100;product=inositol monophosphatase family protein;protein_id=TMR82467.1;transl_table=11 SOQV01000095.1 Genbank gene 21360 21638 . - . ID=gene-E3V42_10105;Name=E3V42_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10105 SOQV01000095.1 Protein Homology CDS 21360 21638 . - 0 ID=cds-TMR82468.1;Parent=gene-E3V42_10105;Dbxref=NCBI_GP:TMR82468.1;Name=TMR82468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358854.1;locus_tag=E3V42_10105;product=UPF0223 family protein;protein_id=TMR82468.1;transl_table=11 SOQV01000095.1 Genbank gene 21638 22039 . - . ID=gene-E3V42_10110;Name=E3V42_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10110 SOQV01000095.1 Protein Homology CDS 21638 22039 . - 0 ID=cds-TMR82469.1;Parent=gene-E3V42_10110;Dbxref=NCBI_GP:TMR82469.1;Name=TMR82469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358855.1;locus_tag=E3V42_10110;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=TMR82469.1;transl_table=11 SOQV01000095.1 Genbank gene 22250 22867 . - . ID=gene-E3V42_10115;Name=E3V42_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10115 SOQV01000095.1 Protein Homology CDS 22250 22867 . - 0 ID=cds-TMR82470.1;Parent=gene-E3V42_10115;Dbxref=NCBI_GP:TMR82470.1;Name=TMR82470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445838.1;locus_tag=E3V42_10115;product=TIGR01906 family membrane protein;protein_id=TMR82470.1;transl_table=11 SOQV01000095.1 Genbank gene 22857 23630 . - . ID=gene-E3V42_10120;Name=E3V42_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10120 SOQV01000095.1 Protein Homology CDS 22857 23630 . - 0 ID=cds-TMR82471.1;Parent=gene-E3V42_10120;Dbxref=NCBI_GP:TMR82471.1;Name=TMR82471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445837.1;locus_tag=E3V42_10120;product=TIGR01457 family HAD-type hydrolase;protein_id=TMR82471.1;transl_table=11 SOQV01000095.1 Genbank gene 23641 24378 . - . ID=gene-E3V42_10125;Name=E3V42_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10125 SOQV01000095.1 Protein Homology CDS 23641 24378 . - 0 ID=cds-TMR82472.1;Parent=gene-E3V42_10125;Dbxref=NCBI_GP:TMR82472.1;Name=TMR82472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524807.1;locus_tag=E3V42_10125;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=TMR82472.1;transl_table=11 SOQV01000095.1 Genbank gene 24383 25513 . - . ID=gene-E3V42_10130;Name=E3V42_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10130 SOQV01000095.1 Protein Homology CDS 24383 25513 . - 0 ID=cds-TMR82473.1;Parent=gene-E3V42_10130;Dbxref=NCBI_GP:TMR82473.1;Name=TMR82473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445835.1;locus_tag=E3V42_10130;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=TMR82473.1;transl_table=11 SOQV01000095.1 Genbank gene 25689 29786 . - . ID=gene-E3V42_10135;Name=E3V42_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10135 SOQV01000095.1 Protein Homology CDS 25689 29786 . - 0 ID=cds-TMR82474.1;Parent=gene-E3V42_10135;Dbxref=NCBI_GP:TMR82474.1;Name=TMR82474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651637.1;locus_tag=E3V42_10135;product=YSIRK-type signal peptide-containing protein;protein_id=TMR82474.1;transl_table=11 SOQV01000095.1 Genbank gene 30145 30540 . - . ID=gene-E3V42_10140;Name=E3V42_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10140 SOQV01000095.1 Protein Homology CDS 30145 30540 . - 0 ID=cds-TMR82475.1;Parent=gene-E3V42_10140;Dbxref=NCBI_GP:TMR82475.1;Name=TMR82475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517366.1;locus_tag=E3V42_10140;product=YtxH domain-containing protein;protein_id=TMR82475.1;transl_table=11 SOQV01000095.1 Genbank gene 30556 30939 . - . ID=gene-E3V42_10145;Name=E3V42_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10145 SOQV01000095.1 Protein Homology CDS 30556 30939 . - 0 ID=cds-TMR82476.1;Parent=gene-E3V42_10145;Dbxref=NCBI_GP:TMR82476.1;Name=TMR82476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358861.1;locus_tag=E3V42_10145;product=DUF948 domain-containing protein;protein_id=TMR82476.1;transl_table=11 SOQV01000095.1 Genbank gene 30940 31728 . - . ID=gene-E3V42_10150;Name=E3V42_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10150 SOQV01000095.1 Protein Homology CDS 30940 31728 . - 0 ID=cds-TMR82477.1;Parent=gene-E3V42_10150;Dbxref=NCBI_GP:TMR82477.1;Name=TMR82477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445832.1;locus_tag=E3V42_10150;product=prolipoprotein diacylglyceryl transferase;protein_id=TMR82477.1;transl_table=11 SOQV01000095.1 Genbank gene 31721 32671 . - . ID=gene-E3V42_10155;Name=E3V42_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10155 SOQV01000095.1 Protein Homology CDS 31721 32671 . - 0 ID=cds-TMR82478.1;Parent=gene-E3V42_10155;Dbxref=NCBI_GP:TMR82478.1;Name=TMR82478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358863.1;locus_tag=E3V42_10155;product=HPr kinase/phosphorylase;protein_id=TMR82478.1;transl_table=11 SOQV01000095.1 Genbank gene 32753 32944 . + . ID=gene-E3V42_10160;Name=E3V42_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10160 SOQV01000095.1 Protein Homology CDS 32753 32944 . + 0 ID=cds-TMR82479.1;Parent=gene-E3V42_10160;Dbxref=NCBI_GP:TMR82479.1;Name=TMR82479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=E3V42_10160;product=hypothetical protein;protein_id=TMR82479.1;transl_table=11 SOQV01000095.1 Genbank gene 32984 33160 . - . ID=gene-E3V42_10165;Name=E3V42_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10165 SOQV01000095.1 Protein Homology CDS 32984 33160 . - 0 ID=cds-TMR82480.1;Parent=gene-E3V42_10165;Dbxref=NCBI_GP:TMR82480.1;Name=TMR82480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445830.1;locus_tag=E3V42_10165;product=30S ribosomal protein S21;protein_id=TMR82480.1;transl_table=11 SOQV01000095.1 Genbank gene 33299 34006 . - . ID=gene-E3V42_10170;Name=E3V42_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10170 SOQV01000095.1 Protein Homology CDS 33299 34006 . - 0 ID=cds-TMR82481.1;Parent=gene-E3V42_10170;Dbxref=NCBI_GP:TMR82481.1;Name=TMR82481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445829.1;locus_tag=E3V42_10170;product=glucosamine-6-phosphate deaminase;protein_id=TMR82481.1;transl_table=11 SOQV01000095.1 Genbank gene 34157 35185 . + . ID=gene-E3V42_10175;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=E3V42_10175 SOQV01000095.1 Protein Homology CDS 34157 35185 . + 0 ID=cds-TMR82483.1;Parent=gene-E3V42_10175;Dbxref=NCBI_GP:TMR82483.1;Name=TMR82483.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445828.1;locus_tag=E3V42_10175;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=TMR82483.1;transl_table=11 ##sequence-region SOQV01000096.1 1 7248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000096.1 Genbank region 1 7248 . + . ID=SOQV01000096.1:1..7248;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000096.1 Genbank gene 1 140 . - . ID=gene-E3V42_10180;Name=E3V42_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10180;partial=true;start_range=.,1 SOQV01000096.1 Protein Homology CDS 1 140 . - 0 ID=cds-TMR82410.1;Parent=gene-E3V42_10180;Dbxref=NCBI_GP:TMR82410.1;Name=TMR82410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=E3V42_10180;partial=true;product=transposase;protein_id=TMR82410.1;start_range=.,1;transl_table=11 SOQV01000096.1 Genbank gene 1172 1699 . - . ID=gene-E3V42_10185;Name=E3V42_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10185 SOQV01000096.1 GeneMarkS-2+ CDS 1172 1699 . - 0 ID=cds-TMR82404.1;Parent=gene-E3V42_10185;Dbxref=NCBI_GP:TMR82404.1;Name=TMR82404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_10185;product=DUF4148 domain-containing protein;protein_id=TMR82404.1;transl_table=11 SOQV01000096.1 Genbank gene 1778 1984 . + . ID=gene-E3V42_10190;Name=E3V42_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10190 SOQV01000096.1 Protein Homology CDS 1778 1984 . + 0 ID=cds-TMR82405.1;Parent=gene-E3V42_10190;Dbxref=NCBI_GP:TMR82405.1;Name=TMR82405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359505.1;locus_tag=E3V42_10190;product=hypothetical protein;protein_id=TMR82405.1;transl_table=11 SOQV01000096.1 Genbank gene 2337 3185 . - . ID=gene-E3V42_10195;Name=E3V42_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10195 SOQV01000096.1 Protein Homology CDS 2337 3185 . - 0 ID=cds-TMR82406.1;Parent=gene-E3V42_10195;Dbxref=NCBI_GP:TMR82406.1;Name=TMR82406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359504.1;locus_tag=E3V42_10195;product=methyltransferase domain-containing protein;protein_id=TMR82406.1;transl_table=11 SOQV01000096.1 Genbank gene 3337 3615 . + . ID=gene-E3V42_10200;Name=E3V42_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10200 SOQV01000096.1 Protein Homology CDS 3337 3615 . + 0 ID=cds-TMR82407.1;Parent=gene-E3V42_10200;Dbxref=NCBI_GP:TMR82407.1;Name=TMR82407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445308.1;locus_tag=E3V42_10200;product=hypothetical protein;protein_id=TMR82407.1;transl_table=11 SOQV01000096.1 Genbank gene 3617 5680 . + . ID=gene-E3V42_10205;Name=E3V42_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10205 SOQV01000096.1 Protein Homology CDS 3617 5680 . + 0 ID=cds-TMR82408.1;Parent=gene-E3V42_10205;Dbxref=NCBI_GP:TMR82408.1;Name=TMR82408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008805.1;locus_tag=E3V42_10205;product=heavy metal translocating P-type ATPase;protein_id=TMR82408.1;transl_table=11 SOQV01000096.1 Genbank gene 5758 7014 . - . ID=gene-E3V42_10210;Name=E3V42_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10210 SOQV01000096.1 Protein Homology CDS 5758 7014 . - 0 ID=cds-TMR82409.1;Parent=gene-E3V42_10210;Dbxref=NCBI_GP:TMR82409.1;Name=TMR82409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546895.1;locus_tag=E3V42_10210;product=tyrosine--tRNA ligase;protein_id=TMR82409.1;transl_table=11 ##sequence-region SOQV01000097.1 1 23941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000097.1 Genbank region 1 23941 . + . ID=SOQV01000097.1:1..23941;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000097.1 Genbank pseudogene 1 284 . - . ID=gene-E3V42_10215;Name=E3V42_10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10215;pseudo=true SOQV01000097.1 Protein Homology CDS 1 284 . - 0 ID=cds-E3V42_10215;Parent=gene-E3V42_10215;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_10215;product=transposase family protein;pseudo=true;transl_table=11 SOQV01000097.1 Genbank gene 620 1573 . + . ID=gene-E3V42_10220;Name=E3V42_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10220 SOQV01000097.1 Protein Homology CDS 620 1573 . + 0 ID=cds-TMR82372.1;Parent=gene-E3V42_10220;Dbxref=NCBI_GP:TMR82372.1;Name=TMR82372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359447.1;locus_tag=E3V42_10220;product=class I SAM-dependent methyltransferase;protein_id=TMR82372.1;transl_table=11 SOQV01000097.1 Genbank gene 1623 2813 . + . ID=gene-E3V42_10225;Name=E3V42_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10225 SOQV01000097.1 Protein Homology CDS 1623 2813 . + 0 ID=cds-TMR82373.1;Parent=gene-E3V42_10225;Dbxref=NCBI_GP:TMR82373.1;Name=TMR82373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359446.1;locus_tag=E3V42_10225;product=acetate kinase;protein_id=TMR82373.1;transl_table=11 SOQV01000097.1 Genbank gene 3329 3784 . + . ID=gene-E3V42_10230;Name=E3V42_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10230 SOQV01000097.1 Protein Homology CDS 3329 3784 . + 0 ID=cds-TMR82374.1;Parent=gene-E3V42_10230;Dbxref=NCBI_GP:TMR82374.1;Name=TMR82374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446611.1;locus_tag=E3V42_10230;product=hypothetical protein;protein_id=TMR82374.1;transl_table=11 SOQV01000097.1 Genbank gene 3790 4335 . + . ID=gene-E3V42_10235;Name=E3V42_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10235 SOQV01000097.1 GeneMarkS-2+ CDS 3790 4335 . + 0 ID=cds-TMR82375.1;Parent=gene-E3V42_10235;Dbxref=NCBI_GP:TMR82375.1;Name=TMR82375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=E3V42_10235;product=hypothetical protein;protein_id=TMR82375.1;transl_table=11 SOQV01000097.1 Genbank gene 4662 5033 . + . ID=gene-E3V42_10240;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=E3V42_10240 SOQV01000097.1 Protein Homology CDS 4662 5033 . + 0 ID=cds-TMR82376.1;Parent=gene-E3V42_10240;Dbxref=NCBI_GP:TMR82376.1;Name=TMR82376.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359445.1;locus_tag=E3V42_10240;product=ribonuclease P protein component;protein_id=TMR82376.1;transl_table=11 SOQV01000097.1 Genbank gene 5002 5832 . + . ID=gene-E3V42_10245;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=E3V42_10245 SOQV01000097.1 Protein Homology CDS 5002 5832 . + 0 ID=cds-TMR82377.1;Parent=gene-E3V42_10245;Dbxref=NCBI_GP:TMR82377.1;Name=TMR82377.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359444.1;locus_tag=E3V42_10245;product=membrane protein insertase YidC;protein_id=TMR82377.1;transl_table=11 SOQV01000097.1 Genbank gene 5850 6836 . + . ID=gene-E3V42_10250;Name=E3V42_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10250 SOQV01000097.1 Protein Homology CDS 5850 6836 . + 0 ID=cds-TMR82378.1;Parent=gene-E3V42_10250;Dbxref=NCBI_GP:TMR82378.1;Name=TMR82378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359443.1;locus_tag=E3V42_10250;product=protein jag;protein_id=TMR82378.1;transl_table=11 SOQV01000097.1 Genbank gene 6887 7510 . + . ID=gene-E3V42_10255;Name=E3V42_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10255 SOQV01000097.1 Protein Homology CDS 6887 7510 . + 0 ID=cds-TMR82379.1;Parent=gene-E3V42_10255;Dbxref=NCBI_GP:TMR82379.1;Name=TMR82379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932633.1;locus_tag=E3V42_10255;product=ribonuclease P;protein_id=TMR82379.1;transl_table=11 SOQV01000097.1 Genbank gene 7626 9602 . + . ID=gene-E3V42_10260;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=E3V42_10260 SOQV01000097.1 Protein Homology CDS 7626 9602 . + 0 ID=cds-TMR82380.1;Parent=gene-E3V42_10260;Dbxref=NCBI_GP:TMR82380.1;Name=TMR82380.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445380.1;locus_tag=E3V42_10260;product=transketolase;protein_id=TMR82380.1;transl_table=11 SOQV01000097.1 Genbank gene 9719 10018 . + . ID=gene-E3V42_10265;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=E3V42_10265 SOQV01000097.1 Protein Homology CDS 9719 10018 . + 0 ID=cds-TMR82381.1;Parent=gene-E3V42_10265;Dbxref=NCBI_GP:TMR82381.1;Name=TMR82381.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445381.1;locus_tag=E3V42_10265;product=preprotein translocase subunit YajC;protein_id=TMR82381.1;transl_table=11 SOQV01000097.1 Genbank gene 10065 10508 . + . ID=gene-E3V42_10270;Name=E3V42_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10270 SOQV01000097.1 Protein Homology CDS 10065 10508 . + 0 ID=cds-TMR82382.1;Parent=gene-E3V42_10270;Dbxref=NCBI_GP:TMR82382.1;Name=TMR82382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445382.1;locus_tag=E3V42_10270;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=TMR82382.1;transl_table=11 SOQV01000097.1 Genbank gene 10495 10905 . + . ID=gene-E3V42_10275;Name=E3V42_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10275 SOQV01000097.1 Protein Homology CDS 10495 10905 . + 0 ID=cds-TMR82383.1;Parent=gene-E3V42_10275;Dbxref=NCBI_GP:TMR82383.1;Name=TMR82383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359430.1;locus_tag=E3V42_10275;product=hypothetical protein;protein_id=TMR82383.1;transl_table=11 SOQV01000097.1 Genbank pseudogene 11319 13968 . + . ID=gene-E3V42_10280;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;locus_tag=E3V42_10280;pseudo=true SOQV01000097.1 Protein Homology CDS 11319 13968 . + 0 ID=cds-E3V42_10280;Parent=gene-E3V42_10280;Note=frameshifted%3B internal stop;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018375425.1;locus_tag=E3V42_10280;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 SOQV01000097.1 Genbank gene 14092 15009 . + . ID=gene-E3V42_10285;Name=E3V42_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10285 SOQV01000097.1 Protein Homology CDS 14092 15009 . + 0 ID=cds-TMR82384.1;Parent=gene-E3V42_10285;Dbxref=NCBI_GP:TMR82384.1;Name=TMR82384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033774.1;locus_tag=E3V42_10285;product=XRE family transcriptional regulator;protein_id=TMR82384.1;transl_table=11 SOQV01000097.1 Genbank gene 15533 16216 . + . ID=gene-E3V42_10290;Name=E3V42_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10290 SOQV01000097.1 Protein Homology CDS 15533 16216 . + 0 ID=cds-TMR82385.1;Parent=gene-E3V42_10290;Dbxref=NCBI_GP:TMR82385.1;Name=TMR82385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183753.1;locus_tag=E3V42_10290;product=ABC transporter ATP-binding protein;protein_id=TMR82385.1;transl_table=11 SOQV01000097.1 Genbank gene 16506 17486 . + . ID=gene-E3V42_10295;Name=E3V42_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10295 SOQV01000097.1 Protein Homology CDS 16506 17486 . + 0 ID=cds-TMR82393.1;Parent=gene-E3V42_10295;Dbxref=NCBI_GP:TMR82393.1;Name=TMR82393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359418.1;locus_tag=E3V42_10295;product=ABC transporter permease;protein_id=TMR82393.1;transl_table=11 SOQV01000097.1 Genbank gene 17663 18670 . + . ID=gene-E3V42_10300;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=E3V42_10300 SOQV01000097.1 Protein Homology CDS 17663 18670 . + 0 ID=cds-TMR82386.1;Parent=gene-E3V42_10300;Dbxref=NCBI_GP:TMR82386.1;Name=TMR82386.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=E3V42_10300;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=TMR82386.1;transl_table=11 SOQV01000097.1 Genbank gene 18739 19614 . - . ID=gene-E3V42_10305;Name=E3V42_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10305 SOQV01000097.1 Protein Homology CDS 18739 19614 . - 0 ID=cds-TMR82387.1;Parent=gene-E3V42_10305;Dbxref=NCBI_GP:TMR82387.1;Name=TMR82387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445386.1;locus_tag=E3V42_10305;product=RluA family pseudouridine synthase;protein_id=TMR82387.1;transl_table=11 SOQV01000097.1 Genbank gene 19701 21896 . + . ID=gene-E3V42_10310;Name=E3V42_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10310 SOQV01000097.1 Protein Homology CDS 19701 21896 . + 0 ID=cds-TMR82388.1;Parent=gene-E3V42_10310;Dbxref=NCBI_GP:TMR82388.1;Name=TMR82388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359415.1;locus_tag=E3V42_10310;product=penicillin-binding protein;protein_id=TMR82388.1;transl_table=11 SOQV01000097.1 Genbank gene 21949 22101 . + . ID=gene-E3V42_10315;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=E3V42_10315 SOQV01000097.1 Protein Homology CDS 21949 22101 . + 0 ID=cds-TMR82389.1;Parent=gene-E3V42_10315;Dbxref=NCBI_GP:TMR82389.1;Name=TMR82389.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359414.1;locus_tag=E3V42_10315;product=50S ribosomal protein L33;protein_id=TMR82389.1;transl_table=11 SOQV01000097.1 Genbank gene 22111 22287 . + . ID=gene-E3V42_10320;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=E3V42_10320 SOQV01000097.1 Protein Homology CDS 22111 22287 . + 0 ID=cds-TMR82390.1;Parent=gene-E3V42_10320;Dbxref=NCBI_GP:TMR82390.1;Name=TMR82390.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359413.1;locus_tag=E3V42_10320;product=preprotein translocase subunit SecE;protein_id=TMR82390.1;transl_table=11 SOQV01000097.1 Genbank gene 22338 22874 . + . ID=gene-E3V42_10325;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=E3V42_10325 SOQV01000097.1 Protein Homology CDS 22338 22874 . + 0 ID=cds-TMR82391.1;Parent=gene-E3V42_10325;Dbxref=NCBI_GP:TMR82391.1;Name=TMR82391.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376740.1;locus_tag=E3V42_10325;product=transcription termination/antitermination protein NusG;protein_id=TMR82391.1;transl_table=11 SOQV01000097.1 Genbank gene 22994 23473 . + . ID=gene-E3V42_10330;Name=E3V42_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10330 SOQV01000097.1 Protein Homology CDS 22994 23473 . + 0 ID=cds-TMR82392.1;Parent=gene-E3V42_10330;Dbxref=NCBI_GP:TMR82392.1;Name=TMR82392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357607.1;locus_tag=E3V42_10330;product=sigma-70 family RNA polymerase sigma factor;protein_id=TMR82392.1;transl_table=11 SOQV01000097.1 Genbank gene 23568 23639 . + . ID=gene-E3V42_10335;Name=E3V42_10335;gbkey=Gene;gene_biotype=tRNA;locus_tag=E3V42_10335 SOQV01000097.1 tRNAscan-SE tRNA 23568 23639 . + . ID=rna-E3V42_10335;Parent=gene-E3V42_10335;anticodon=(pos:23601..23603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_10335;product=tRNA-Glu SOQV01000097.1 tRNAscan-SE exon 23568 23639 . + . ID=exon-E3V42_10335-1;Parent=rna-E3V42_10335;anticodon=(pos:23601..23603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=E3V42_10335;product=tRNA-Glu SOQV01000097.1 Genbank gene 23882 23941 . + . ID=gene-E3V42_10340;Name=E3V42_10340;end_range=23941,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=E3V42_10340;partial=true SOQV01000097.1 Genbank rRNA 23882 23941 . + . ID=rna-E3V42_10340;Parent=gene-E3V42_10340;end_range=23941,.;gbkey=rRNA;locus_tag=E3V42_10340;partial=true;product=16S ribosomal RNA SOQV01000097.1 Genbank exon 23882 23941 . + . ID=exon-E3V42_10340-1;Parent=rna-E3V42_10340;end_range=23941,.;gbkey=rRNA;locus_tag=E3V42_10340;partial=true;product=16S ribosomal RNA ##sequence-region SOQV01000098.1 1 3872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000098.1 Genbank region 1 3872 . + . ID=SOQV01000098.1:1..3872;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000098.1 Genbank gene 1 242 . - . ID=gene-E3V42_10345;Name=E3V42_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10345;partial=true;start_range=.,1 SOQV01000098.1 Protein Homology CDS 1 242 . - 0 ID=cds-TMR82335.1;Parent=gene-E3V42_10345;Dbxref=NCBI_GP:TMR82335.1;Name=TMR82335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=E3V42_10345;partial=true;product=transposase;protein_id=TMR82335.1;start_range=.,1;transl_table=11 SOQV01000098.1 Genbank gene 279 632 . - . ID=gene-E3V42_10350;Name=E3V42_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10350 SOQV01000098.1 Protein Homology CDS 279 632 . - 0 ID=cds-TMR82336.1;Parent=gene-E3V42_10350;Dbxref=NCBI_GP:TMR82336.1;Name=TMR82336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945719.1;locus_tag=E3V42_10350;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=TMR82336.1;transl_table=11 SOQV01000098.1 Genbank gene 1310 2689 . - . ID=gene-E3V42_10355;Name=E3V42_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10355 SOQV01000098.1 Protein Homology CDS 1310 2689 . - 0 ID=cds-TMR82337.1;Parent=gene-E3V42_10355;Dbxref=NCBI_GP:TMR82337.1;Name=TMR82337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358916.1;locus_tag=E3V42_10355;product=NADH oxidase;protein_id=TMR82337.1;transl_table=11 SOQV01000098.1 Genbank pseudogene 2985 3729 . + . ID=gene-E3V42_10360;Name=E3V42_10360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10360;pseudo=true SOQV01000098.1 Protein Homology CDS 2985 3729 . + 0 ID=cds-E3V42_10360;Parent=gene-E3V42_10360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358917.1;locus_tag=E3V42_10360;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 SOQV01000098.1 Genbank pseudogene 3718 3825 . - . ID=gene-E3V42_10365;Name=E3V42_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10365;pseudo=true SOQV01000098.1 Protein Homology CDS 3718 3825 . - 0 ID=cds-E3V42_10365;Parent=gene-E3V42_10365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_10365;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region SOQV01000099.1 1 38743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 SOQV01000099.1 Genbank region 1 38743 . + . ID=SOQV01000099.1:1..38743;Dbxref=taxon:257758;collected-by=GRACE consortium;collection-date=2007;country=United Kingdom;gbkey=Src;isolation-source=NPS;mol_type=genomic DNA;nat-host=Homo sapiens;strain=BHN879 SOQV01000099.1 Genbank gene 229 2694 . + . ID=gene-E3V42_10370;Name=E3V42_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10370 SOQV01000099.1 Protein Homology CDS 229 2694 . + 0 ID=cds-TMR82298.1;Parent=gene-E3V42_10370;Dbxref=NCBI_GP:TMR82298.1;Name=TMR82298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359500.1;locus_tag=E3V42_10370;product=penicillin-binding protein;protein_id=TMR82298.1;transl_table=11 SOQV01000099.1 Genbank gene 2766 3677 . + . ID=gene-E3V42_10375;Name=E3V42_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10375 SOQV01000099.1 Protein Homology CDS 2766 3677 . + 0 ID=cds-TMR82299.1;Parent=gene-E3V42_10375;Dbxref=NCBI_GP:TMR82299.1;Name=TMR82299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445312.1;locus_tag=E3V42_10375;product=EamA/RhaT family transporter;protein_id=TMR82299.1;transl_table=11 SOQV01000099.1 Genbank gene 3908 4606 . + . ID=gene-E3V42_10380;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=E3V42_10380 SOQV01000099.1 Protein Homology CDS 3908 4606 . + 0 ID=cds-TMR82300.1;Parent=gene-E3V42_10380;Dbxref=NCBI_GP:TMR82300.1;Name=TMR82300.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359498.1;locus_tag=E3V42_10380;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=TMR82300.1;transl_table=11 SOQV01000099.1 Genbank gene 4673 5803 . + . ID=gene-E3V42_10385;Name=E3V42_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10385 SOQV01000099.1 Protein Homology CDS 4673 5803 . + 0 ID=cds-TMR82301.1;Parent=gene-E3V42_10385;Dbxref=NCBI_GP:TMR82301.1;Name=TMR82301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445314.1;locus_tag=E3V42_10385;product=N-acetyldiaminopimelate deacetylase;protein_id=TMR82301.1;transl_table=11 SOQV01000099.1 Genbank gene 5815 6354 . + . ID=gene-E3V42_10390;Name=E3V42_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10390 SOQV01000099.1 Protein Homology CDS 5815 6354 . + 0 ID=cds-TMR82302.1;Parent=gene-E3V42_10390;Dbxref=NCBI_GP:TMR82302.1;Name=TMR82302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445315.1;locus_tag=E3V42_10390;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=TMR82302.1;transl_table=11 SOQV01000099.1 Genbank gene 6338 7012 . + . ID=gene-E3V42_10395;Name=E3V42_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10395 SOQV01000099.1 Protein Homology CDS 6338 7012 . + 0 ID=cds-TMR82303.1;Parent=gene-E3V42_10395;Dbxref=NCBI_GP:TMR82303.1;Name=TMR82303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445316.1;locus_tag=E3V42_10395;product=rhomboid family intramembrane serine protease;protein_id=TMR82303.1;transl_table=11 SOQV01000099.1 Genbank gene 7120 8019 . - . ID=gene-E3V42_10400;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=E3V42_10400 SOQV01000099.1 Protein Homology CDS 7120 8019 . - 0 ID=cds-TMR82304.1;Parent=gene-E3V42_10400;Dbxref=NCBI_GP:TMR82304.1;Name=TMR82304.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359494.1;locus_tag=E3V42_10400;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=TMR82304.1;transl_table=11 SOQV01000099.1 Genbank gene 8041 9057 . - . ID=gene-E3V42_10405;Name=E3V42_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10405 SOQV01000099.1 Protein Homology CDS 8041 9057 . - 0 ID=cds-TMR82305.1;Parent=gene-E3V42_10405;Dbxref=NCBI_GP:TMR82305.1;Name=TMR82305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359493.1;locus_tag=E3V42_10405;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=TMR82305.1;transl_table=11 SOQV01000099.1 Genbank gene 9470 9721 . + . ID=gene-E3V42_10410;Name=E3V42_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10410 SOQV01000099.1 Protein Homology CDS 9470 9721 . + 0 ID=cds-TMR82306.1;Parent=gene-E3V42_10410;Dbxref=NCBI_GP:TMR82306.1;Name=TMR82306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827494.1;locus_tag=E3V42_10410;product=arginyl-tRNA synthetase;protein_id=TMR82306.1;transl_table=11 SOQV01000099.1 Genbank gene 9735 10259 . - . ID=gene-E3V42_10415;Name=E3V42_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10415 SOQV01000099.1 Protein Homology CDS 9735 10259 . - 0 ID=cds-TMR82307.1;Parent=gene-E3V42_10415;Dbxref=NCBI_GP:TMR82307.1;Name=TMR82307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13701.4;locus_tag=E3V42_10415;product=hypothetical protein;protein_id=TMR82307.1;transl_table=11 SOQV01000099.1 Genbank gene 10327 10977 . - . ID=gene-E3V42_10420;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=E3V42_10420 SOQV01000099.1 Protein Homology CDS 10327 10977 . - 0 ID=cds-TMR82308.1;Parent=gene-E3V42_10420;Dbxref=NCBI_GP:TMR82308.1;Name=TMR82308.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359490.1;locus_tag=E3V42_10420;product=phosphate signaling complex protein PhoU;protein_id=TMR82308.1;transl_table=11 SOQV01000099.1 Genbank gene 10992 11744 . - . ID=gene-E3V42_10425;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=E3V42_10425 SOQV01000099.1 Protein Homology CDS 10992 11744 . - 0 ID=cds-TMR82309.1;Parent=gene-E3V42_10425;Dbxref=NCBI_GP:TMR82309.1;Name=TMR82309.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003101281.1;locus_tag=E3V42_10425;product=phosphate ABC transporter ATP-binding protein;protein_id=TMR82309.1;transl_table=11 SOQV01000099.1 Genbank gene 11746 12561 . - . ID=gene-E3V42_10430;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=E3V42_10430 SOQV01000099.1 Protein Homology CDS 11746 12561 . - 0 ID=cds-TMR82310.1;Parent=gene-E3V42_10430;Dbxref=NCBI_GP:TMR82310.1;Name=TMR82310.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359488.1;locus_tag=E3V42_10430;product=phosphate ABC transporter permease PstA;protein_id=TMR82310.1;transl_table=11 SOQV01000099.1 Genbank gene 12554 13417 . - . ID=gene-E3V42_10435;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=E3V42_10435 SOQV01000099.1 Protein Homology CDS 12554 13417 . - 0 ID=cds-TMR82311.1;Parent=gene-E3V42_10435;Dbxref=NCBI_GP:TMR82311.1;Name=TMR82311.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359487.1;locus_tag=E3V42_10435;product=phosphate ABC transporter permease subunit PstC;protein_id=TMR82311.1;transl_table=11 SOQV01000099.1 Genbank gene 13535 14410 . - . ID=gene-E3V42_10440;Name=E3V42_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10440 SOQV01000099.1 Protein Homology CDS 13535 14410 . - 0 ID=cds-TMR82312.1;Parent=gene-E3V42_10440;Dbxref=NCBI_GP:TMR82312.1;Name=TMR82312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669496.1;locus_tag=E3V42_10440;product=extracellular solute-binding protein;protein_id=TMR82312.1;transl_table=11 SOQV01000099.1 Genbank gene 14577 15908 . - . ID=gene-E3V42_10445;Name=E3V42_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10445 SOQV01000099.1 Protein Homology CDS 14577 15908 . - 0 ID=cds-TMR82313.1;Parent=gene-E3V42_10445;Dbxref=NCBI_GP:TMR82313.1;Name=TMR82313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359485.1;locus_tag=E3V42_10445;product=two-component sensor histidine kinase;protein_id=TMR82313.1;transl_table=11 SOQV01000099.1 Genbank gene 15909 16616 . - . ID=gene-E3V42_10450;Name=E3V42_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10450 SOQV01000099.1 Protein Homology CDS 15909 16616 . - 0 ID=cds-TMR82314.1;Parent=gene-E3V42_10450;Dbxref=NCBI_GP:TMR82314.1;Name=TMR82314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359484.1;locus_tag=E3V42_10450;product=response regulator transcription factor;protein_id=TMR82314.1;transl_table=11 SOQV01000099.1 Genbank pseudogene 16700 16840 . - . ID=gene-E3V42_10455;Name=E3V42_10455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10455;pseudo=true SOQV01000099.1 Protein Homology CDS 16700 16840 . - 0 ID=cds-E3V42_10455;Parent=gene-E3V42_10455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359483.1;locus_tag=E3V42_10455;product=cupin;pseudo=true;transl_table=11 SOQV01000099.1 Genbank pseudogene 16833 17346 . + . ID=gene-E3V42_10460;Name=E3V42_10460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10460;pseudo=true SOQV01000099.1 Protein Homology CDS 16833 17346 . + 0 ID=cds-E3V42_10460;Parent=gene-E3V42_10460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_10460;product=transposase;pseudo=true;transl_table=11 SOQV01000099.1 Genbank gene 18185 19876 . - . ID=gene-E3V42_10465;Name=E3V42_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10465 SOQV01000099.1 Protein Homology CDS 18185 19876 . - 0 ID=cds-TMR82315.1;Parent=gene-E3V42_10465;Dbxref=NCBI_GP:TMR82315.1;Name=TMR82315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445320.1;locus_tag=E3V42_10465;product=arginine--tRNA ligase;protein_id=TMR82315.1;transl_table=11 SOQV01000099.1 Genbank gene 20012 20458 . + . ID=gene-E3V42_10470;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=E3V42_10470 SOQV01000099.1 Protein Homology CDS 20012 20458 . + 0 ID=cds-TMR82316.1;Parent=gene-E3V42_10470;Dbxref=NCBI_GP:TMR82316.1;Name=TMR82316.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445321.1;locus_tag=E3V42_10470;product=arginine repressor;protein_id=TMR82316.1;transl_table=11 SOQV01000099.1 Genbank gene 20509 23043 . + . ID=gene-E3V42_10475;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=E3V42_10475 SOQV01000099.1 Protein Homology CDS 20509 23043 . + 0 ID=cds-TMR82317.1;Parent=gene-E3V42_10475;Dbxref=NCBI_GP:TMR82317.1;Name=TMR82317.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445322.1;locus_tag=E3V42_10475;product=DNA mismatch repair protein MutS;protein_id=TMR82317.1;transl_table=11 SOQV01000099.1 Genbank gene 23189 24895 . + . ID=gene-E3V42_10480;Name=patA;gbkey=Gene;gene=patA;gene_biotype=protein_coding;locus_tag=E3V42_10480 SOQV01000099.1 Protein Homology CDS 23189 24895 . + 0 ID=cds-TMR82318.1;Parent=gene-E3V42_10480;Dbxref=NCBI_GP:TMR82318.1;Name=TMR82318.1;gbkey=CDS;gene=patA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445323.1;locus_tag=E3V42_10480;product=multidrug efflux ABC transporter subunit PatA;protein_id=TMR82318.1;transl_table=11 SOQV01000099.1 Genbank gene 24897 26663 . + . ID=gene-E3V42_10485;Name=patB;gbkey=Gene;gene=patB;gene_biotype=protein_coding;locus_tag=E3V42_10485 SOQV01000099.1 Protein Homology CDS 24897 26663 . + 0 ID=cds-TMR82319.1;Parent=gene-E3V42_10485;Dbxref=NCBI_GP:TMR82319.1;Name=TMR82319.1;gbkey=CDS;gene=patB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445324.1;locus_tag=E3V42_10485;product=multidrug efflux ABC transporter subunit PatB;protein_id=TMR82319.1;transl_table=11 SOQV01000099.1 Genbank gene 26952 27641 . + . ID=gene-E3V42_10490;Name=E3V42_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10490 SOQV01000099.1 Protein Homology CDS 26952 27641 . + 0 ID=cds-TMR82320.1;Parent=gene-E3V42_10490;Dbxref=NCBI_GP:TMR82320.1;Name=TMR82320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445325.1;locus_tag=E3V42_10490;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=TMR82320.1;transl_table=11 SOQV01000099.1 Genbank pseudogene 27645 27810 . + . ID=gene-E3V42_10495;Name=E3V42_10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10495;pseudo=true SOQV01000099.1 Protein Homology CDS 27645 27810 . + 0 ID=cds-E3V42_10495;Parent=gene-E3V42_10495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359474.1;locus_tag=E3V42_10495;product=hypothetical protein;pseudo=true;transl_table=11 SOQV01000099.1 Genbank gene 27812 29161 . + . ID=gene-E3V42_10500;Name=E3V42_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10500 SOQV01000099.1 Protein Homology CDS 27812 29161 . + 0 ID=cds-TMR82321.1;Parent=gene-E3V42_10500;Dbxref=NCBI_GP:TMR82321.1;Name=TMR82321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445327.1;locus_tag=E3V42_10500;product=glucose-6-phosphate isomerase;protein_id=TMR82321.1;transl_table=11 SOQV01000099.1 Genbank gene 29289 30749 . + . ID=gene-E3V42_10505;Name=E3V42_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10505 SOQV01000099.1 Protein Homology CDS 29289 30749 . + 0 ID=cds-TMR82322.1;Parent=gene-E3V42_10505;Dbxref=NCBI_GP:TMR82322.1;Name=TMR82322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359472.1;locus_tag=E3V42_10505;product=glutamate--tRNA ligase;protein_id=TMR82322.1;transl_table=11 SOQV01000099.1 Genbank gene 30763 31197 . + . ID=gene-E3V42_10510;Name=E3V42_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10510 SOQV01000099.1 Protein Homology CDS 30763 31197 . + 0 ID=cds-TMR82323.1;Parent=gene-E3V42_10510;Dbxref=NCBI_GP:TMR82323.1;Name=TMR82323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359471.1;locus_tag=E3V42_10510;product=cytidine deaminase;protein_id=TMR82323.1;transl_table=11 SOQV01000099.1 Genbank gene 31311 31550 . + . ID=gene-E3V42_10515;Name=E3V42_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10515 SOQV01000099.1 Protein Homology CDS 31311 31550 . + 0 ID=cds-TMR82324.1;Parent=gene-E3V42_10515;Dbxref=NCBI_GP:TMR82324.1;Name=TMR82324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907299.1;locus_tag=E3V42_10515;product=hypothetical protein;protein_id=TMR82324.1;transl_table=11 SOQV01000099.1 Genbank gene 31869 32927 . + . ID=gene-E3V42_10520;Name=E3V42_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10520 SOQV01000099.1 Protein Homology CDS 31869 32927 . + 0 ID=cds-TMR82325.1;Parent=gene-E3V42_10520;Dbxref=NCBI_GP:TMR82325.1;Name=TMR82325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359457.1;locus_tag=E3V42_10520;product=alcohol dehydrogenase;protein_id=TMR82325.1;transl_table=11 SOQV01000099.1 Genbank gene 33078 33443 . + . ID=gene-E3V42_10525;Name=E3V42_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10525 SOQV01000099.1 Protein Homology CDS 33078 33443 . + 0 ID=cds-TMR82326.1;Parent=gene-E3V42_10525;Dbxref=NCBI_GP:TMR82326.1;Name=TMR82326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445357.1;locus_tag=E3V42_10525;product=DUF1033 family protein;protein_id=TMR82326.1;transl_table=11 SOQV01000099.1 Genbank gene 33519 34460 . + . ID=gene-E3V42_10530;Name=E3V42_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10530 SOQV01000099.1 Protein Homology CDS 33519 34460 . + 0 ID=cds-TMR82327.1;Parent=gene-E3V42_10530;Dbxref=NCBI_GP:TMR82327.1;Name=TMR82327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359455.1;locus_tag=E3V42_10530;product=type II/IV secretion system protein;protein_id=TMR82327.1;transl_table=11 SOQV01000099.1 Genbank gene 34408 35424 . + . ID=gene-E3V42_10535;Name=E3V42_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10535 SOQV01000099.1 Protein Homology CDS 34408 35424 . + 0 ID=cds-TMR82333.1;Parent=gene-E3V42_10535;Dbxref=NCBI_GP:TMR82333.1;Name=TMR82333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355375.1;locus_tag=E3V42_10535;product=type II secretion system F family protein;protein_id=TMR82333.1;transl_table=11 SOQV01000099.1 Genbank gene 35426 35749 . + . ID=gene-E3V42_10540;Name=E3V42_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10540 SOQV01000099.1 Protein Homology CDS 35426 35749 . + 0 ID=cds-TMR82328.1;Parent=gene-E3V42_10540;Dbxref=NCBI_GP:TMR82328.1;Name=TMR82328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445360.1;locus_tag=E3V42_10540;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=TMR82328.1;transl_table=11 SOQV01000099.1 Genbank gene 35667 36146 . + . ID=gene-E3V42_10545;Name=E3V42_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10545 SOQV01000099.1 Protein Homology CDS 35667 36146 . + 0 ID=cds-TMR82329.1;Parent=gene-E3V42_10545;Dbxref=NCBI_GP:TMR82329.1;Name=TMR82329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445361.1;locus_tag=E3V42_10545;product=type II secretion system protein;protein_id=TMR82329.1;transl_table=11 SOQV01000099.1 Genbank gene 36151 36411 . + . ID=gene-E3V42_10550;Name=E3V42_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10550 SOQV01000099.1 Protein Homology CDS 36151 36411 . + 0 ID=cds-TMR82330.1;Parent=gene-E3V42_10550;Dbxref=NCBI_GP:TMR82330.1;Name=TMR82330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445362.1;locus_tag=E3V42_10550;product=hypothetical protein;protein_id=TMR82330.1;transl_table=11 SOQV01000099.1 Genbank gene 36374 36835 . + . ID=gene-E3V42_10555;Name=E3V42_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10555 SOQV01000099.1 Protein Homology CDS 36374 36835 . + 0 ID=cds-TMR82331.1;Parent=gene-E3V42_10555;Dbxref=NCBI_GP:TMR82331.1;Name=TMR82331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445363.1;locus_tag=E3V42_10555;product=competence protein ComGF;protein_id=TMR82331.1;transl_table=11 SOQV01000099.1 Genbank gene 36813 37226 . + . ID=gene-E3V42_10560;Name=E3V42_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=E3V42_10560 SOQV01000099.1 Protein Homology CDS 36813 37226 . + 0 ID=cds-TMR82332.1;Parent=gene-E3V42_10560;Dbxref=NCBI_GP:TMR82332.1;Name=TMR82332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359450.1;locus_tag=E3V42_10560;product=competence protein ComGF;protein_id=TMR82332.1;transl_table=11 SOQV01000099.1 Genbank pseudogene 37259 37384 . + . ID=gene-E3V42_10565;Name=E3V42_10565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10565;pseudo=true SOQV01000099.1 Protein Homology CDS 37259 37384 . + 0 ID=cds-E3V42_10565;Parent=gene-E3V42_10565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445365.1;locus_tag=E3V42_10565;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 SOQV01000099.1 Genbank pseudogene 38022 38439 . - . ID=gene-E3V42_10570;Name=E3V42_10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10570;pseudo=true SOQV01000099.1 Protein Homology CDS 38022 38439 . - 0 ID=cds-E3V42_10570;Parent=gene-E3V42_10570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284935.1;locus_tag=E3V42_10570;product=N-acetyltransferase;pseudo=true;transl_table=11 SOQV01000099.1 Genbank pseudogene 38589 38696 . - . ID=gene-E3V42_10575;Name=E3V42_10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=E3V42_10575;pseudo=true SOQV01000099.1 Protein Homology CDS 38589 38696 . - 0 ID=cds-E3V42_10575;Parent=gene-E3V42_10575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=E3V42_10575;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ###