##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2129479v1 #!genome-build-accession NCBI_Assembly:GCA_021294795.1 #!annotation-date 12/16/2021 17:15:41 #!annotation-source NCBI ##sequence-region JAJSBG010000070.1 1 4732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000070.1 Genbank region 1 4732 . + . ID=JAJSBG010000070.1:1..4732;Dbxref=taxon:257758;Name=pDRPIS7493;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;genome=plasmid;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=pDRPIS7493;strain=SPPN-FOHM JAJSBG010000070.1 Genbank gene 127 936 . + . ID=gene-LVR01_10900;Name=LVR01_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10900 JAJSBG010000070.1 Protein Homology CDS 127 936 . + 0 ID=cds-MCE2619678.1;Parent=gene-LVR01_10900;Dbxref=NCBI_GP:MCE2619678.1;Name=MCE2619678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715517.1;locus_tag=LVR01_10900;product=replication initiation protein;protein_id=MCE2619678.1;transl_table=11 JAJSBG010000070.1 Genbank gene 1110 1568 . - . ID=gene-LVR01_10905;Name=LVR01_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10905 JAJSBG010000070.1 GeneMarkS-2+ CDS 1110 1568 . - 0 ID=cds-MCE2619679.1;Parent=gene-LVR01_10905;Dbxref=NCBI_GP:MCE2619679.1;Name=MCE2619679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10905;product=hypothetical protein;protein_id=MCE2619679.1;transl_table=11 JAJSBG010000070.1 Genbank gene 1633 1920 . + . ID=gene-LVR01_10910;Name=LVR01_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10910 JAJSBG010000070.1 Protein Homology CDS 1633 1920 . + 0 ID=cds-MCE2619680.1;Parent=gene-LVR01_10910;Dbxref=NCBI_GP:MCE2619680.1;Name=MCE2619680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401844.1;locus_tag=LVR01_10910;product=hypothetical protein;protein_id=MCE2619680.1;transl_table=11 JAJSBG010000070.1 Genbank gene 2371 3873 . + . ID=gene-LVR01_10915;Name=LVR01_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10915 JAJSBG010000070.1 Protein Homology CDS 2371 3873 . + 0 ID=cds-MCE2619681.1;Parent=gene-LVR01_10915;Dbxref=NCBI_GP:MCE2619681.1;Name=MCE2619681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121181.1;locus_tag=LVR01_10915;product=plasmid recombination protein;protein_id=MCE2619681.1;transl_table=11 ##sequence-region JAJSBG010000100.1 1 669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000100.1 Genbank region 1 669 . + . ID=JAJSBG010000100.1:1..669;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000100.1 Genbank gene 1 669 . - . ID=gene-LVR01_11305;Name=LVR01_11305;end_range=669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11305;partial=true;start_range=.,1 JAJSBG010000100.1 Protein Homology CDS 1 669 . - 2 ID=cds-MCE2619729.1;Parent=gene-LVR01_11305;Dbxref=NCBI_GP:MCE2619729.1;Name=MCE2619729.1;end_range=669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237972.1;locus_tag=LVR01_11305;partial=true;product=adhesin;protein_id=MCE2619729.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000101.1 1 659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000101.1 Genbank region 1 659 . + . ID=JAJSBG010000101.1:1..659;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000101.1 Genbank gene 43 659 . + . ID=gene-LVR01_11310;Name=LVR01_11310;end_range=659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11310;partial=true JAJSBG010000101.1 Protein Homology CDS 43 659 . + 0 ID=cds-MCE2619730.1;Parent=gene-LVR01_11310;Dbxref=NCBI_GP:MCE2619730.1;Name=MCE2619730.1;end_range=659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093609.1;locus_tag=LVR01_11310;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=MCE2619730.1;transl_table=11 ##sequence-region JAJSBG010000102.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000102.1 Genbank region 1 617 . + . ID=JAJSBG010000102.1:1..617;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000102.1 Genbank pseudogene 135 617 . - . ID=gene-LVR01_11315;Name=LVR01_11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11315;pseudo=true JAJSBG010000102.1 Protein Homology CDS 135 617 . - 0 ID=cds-LVR01_11315;Parent=gene-LVR01_11315;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_11315;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000103.1 1 571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000103.1 Genbank region 1 571 . + . ID=JAJSBG010000103.1:1..571;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000103.1 Genbank gene 1 220 . + . ID=gene-LVR01_11320;Name=LVR01_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11320;partial=true;start_range=.,1 JAJSBG010000103.1 Protein Homology CDS 1 220 . + 1 ID=cds-MCE2619731.1;Parent=gene-LVR01_11320;Dbxref=NCBI_GP:MCE2619731.1;Name=MCE2619731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237576.1;locus_tag=LVR01_11320;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2619731.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000104.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000104.1 Genbank region 1 530 . + . ID=JAJSBG010000104.1:1..530;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000104.1 Genbank pseudogene 1 530 . - . ID=gene-LVR01_11325;Name=LVR01_11325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11325;pseudo=true JAJSBG010000104.1 Protein Homology CDS 1 530 . - 0 ID=cds-LVR01_11325;Parent=gene-LVR01_11325;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_11325;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000105.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000105.1 Genbank region 1 518 . + . ID=JAJSBG010000105.1:1..518;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000105.1 Genbank pseudogene 28 518 . + . ID=gene-LVR01_11330;Name=LVR01_11330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11330;pseudo=true JAJSBG010000105.1 Protein Homology CDS 28 518 . + 0 ID=cds-LVR01_11330;Parent=gene-LVR01_11330;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=LVR01_11330;product=transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000106.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000106.1 Genbank region 1 499 . + . ID=JAJSBG010000106.1:1..499;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000106.1 Genbank gene 383 499 . + . ID=gene-LVR01_11335;Name=LVR01_11335;end_range=499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11335;partial=true JAJSBG010000106.1 Protein Homology CDS 383 499 . + 0 ID=cds-MCE2619732.1;Parent=gene-LVR01_11335;Dbxref=NCBI_GP:MCE2619732.1;Name=MCE2619732.1;end_range=499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040325.1;locus_tag=LVR01_11335;partial=true;product=maturase;protein_id=MCE2619732.1;transl_table=11 ##sequence-region JAJSBG010000107.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000107.1 Genbank region 1 498 . + . ID=JAJSBG010000107.1:1..498;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000107.1 Genbank pseudogene 1 498 . + . ID=gene-LVR01_11340;Name=LVR01_11340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11340;pseudo=true JAJSBG010000107.1 Protein Homology CDS 1 498 . + 2 ID=cds-LVR01_11340;Parent=gene-LVR01_11340;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015038.2;locus_tag=LVR01_11340;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000108.1 1 433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000108.1 Genbank region 1 433 . + . ID=JAJSBG010000108.1:1..433;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000108.1 Genbank gene 1 433 . - . ID=gene-LVR01_11345;Name=LVR01_11345;end_range=433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11345;partial=true;start_range=.,1 JAJSBG010000108.1 Protein Homology CDS 1 433 . - 0 ID=cds-MCE2619733.1;Parent=gene-LVR01_11345;Dbxref=NCBI_GP:MCE2619733.1;Name=MCE2619733.1;end_range=433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856457.1;locus_tag=LVR01_11345;partial=true;product=transposase;protein_id=MCE2619733.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000109.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000109.1 Genbank region 1 420 . + . ID=JAJSBG010000109.1:1..420;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000109.1 Genbank gene 1 420 . + . ID=gene-LVR01_11350;Name=LVR01_11350;end_range=420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11350;partial=true;start_range=.,1 JAJSBG010000109.1 Protein Homology CDS 1 420 . + 0 ID=cds-MCE2619734.1;Parent=gene-LVR01_11350;Dbxref=NCBI_GP:MCE2619734.1;Name=MCE2619734.1;end_range=420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_068988785.1;locus_tag=LVR01_11350;partial=true;product=transposase;protein_id=MCE2619734.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000010.1 1 54203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000010.1 Genbank region 1 54203 . + . ID=JAJSBG010000010.1:1..54203;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000010.1 Genbank gene 388 867 . - . ID=gene-LVR01_04095;Name=LVR01_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04095 JAJSBG010000010.1 Protein Homology CDS 388 867 . - 0 ID=cds-MCE2618459.1;Parent=gene-LVR01_04095;Dbxref=NCBI_GP:MCE2618459.1;Name=MCE2618459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588858.1;locus_tag=LVR01_04095;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCE2618459.1;transl_table=11 JAJSBG010000010.1 Genbank gene 987 2945 . - . ID=gene-LVR01_04100;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LVR01_04100 JAJSBG010000010.1 Protein Homology CDS 987 2945 . - 0 ID=cds-MCE2618460.1;Parent=gene-LVR01_04100;Dbxref=NCBI_GP:MCE2618460.1;Name=MCE2618460.1;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744538.1;locus_tag=LVR01_04100;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MCE2618460.1;transl_table=11 JAJSBG010000010.1 Genbank gene 2961 3503 . - . ID=gene-LVR01_04105;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LVR01_04105 JAJSBG010000010.1 Protein Homology CDS 2961 3503 . - 0 ID=cds-MCE2618461.1;Parent=gene-LVR01_04105;Dbxref=NCBI_GP:MCE2618461.1;Name=MCE2618461.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520984.1;locus_tag=LVR01_04105;product=hypoxanthine phosphoribosyltransferase;protein_id=MCE2618461.1;transl_table=11 JAJSBG010000010.1 Genbank gene 3508 4785 . - . ID=gene-LVR01_04110;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LVR01_04110 JAJSBG010000010.1 Protein Homology CDS 3508 4785 . - 0 ID=cds-MCE2618462.1;Parent=gene-LVR01_04110;Dbxref=NCBI_GP:MCE2618462.1;Name=MCE2618462.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269826.1;locus_tag=LVR01_04110;product=tRNA lysidine(34) synthetase TilS;protein_id=MCE2618462.1;transl_table=11 JAJSBG010000010.1 Genbank gene 4782 6050 . - . ID=gene-LVR01_04115;Name=LVR01_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04115 JAJSBG010000010.1 Protein Homology CDS 4782 6050 . - 0 ID=cds-MCE2618463.1;Parent=gene-LVR01_04115;Dbxref=NCBI_GP:MCE2618463.1;Name=MCE2618463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224749.1;locus_tag=LVR01_04115;product=class A beta-lactamase-related serine hydrolase;protein_id=MCE2618463.1;transl_table=11 JAJSBG010000010.1 Genbank gene 6170 6538 . - . ID=gene-LVR01_04120;Name=LVR01_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04120 JAJSBG010000010.1 Protein Homology CDS 6170 6538 . - 0 ID=cds-MCE2618464.1;Parent=gene-LVR01_04120;Dbxref=NCBI_GP:MCE2618464.1;Name=MCE2618464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397271.1;locus_tag=LVR01_04120;product=septum formation initiator family protein;protein_id=MCE2618464.1;transl_table=11 JAJSBG010000010.1 Genbank gene 6531 6797 . - . ID=gene-LVR01_04125;Name=LVR01_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04125 JAJSBG010000010.1 Protein Homology CDS 6531 6797 . - 0 ID=cds-MCE2618465.1;Parent=gene-LVR01_04125;Dbxref=NCBI_GP:MCE2618465.1;Name=MCE2618465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234972.1;locus_tag=LVR01_04125;product=RNA-binding S4 domain-containing protein;protein_id=MCE2618465.1;transl_table=11 JAJSBG010000010.1 Genbank gene 6855 10364 . - . ID=gene-LVR01_04130;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LVR01_04130 JAJSBG010000010.1 Protein Homology CDS 6855 10364 . - 0 ID=cds-MCE2618466.1;Parent=gene-LVR01_04130;Dbxref=NCBI_GP:MCE2618466.1;Name=MCE2618466.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258090.1;locus_tag=LVR01_04130;product=transcription-repair coupling factor;protein_id=MCE2618466.1;transl_table=11 JAJSBG010000010.1 Genbank gene 10365 10934 . - . ID=gene-LVR01_04135;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LVR01_04135 JAJSBG010000010.1 Protein Homology CDS 10365 10934 . - 0 ID=cds-MCE2618467.1;Parent=gene-LVR01_04135;Dbxref=NCBI_GP:MCE2618467.1;Name=MCE2618467.1;gbkey=CDS;gene=pth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163933.1;locus_tag=LVR01_04135;product=aminoacyl-tRNA hydrolase;protein_id=MCE2618467.1;transl_table=11 JAJSBG010000010.1 Genbank gene 11006 12121 . - . ID=gene-LVR01_04140;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LVR01_04140 JAJSBG010000010.1 Protein Homology CDS 11006 12121 . - 0 ID=cds-MCE2618468.1;Parent=gene-LVR01_04140;Dbxref=NCBI_GP:MCE2618468.1;Name=MCE2618468.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=LVR01_04140;product=redox-regulated ATPase YchF;protein_id=MCE2618468.1;transl_table=11 JAJSBG010000010.1 Genbank gene 12205 12399 . - . ID=gene-LVR01_04145;Name=LVR01_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04145 JAJSBG010000010.1 Protein Homology CDS 12205 12399 . - 0 ID=cds-MCE2618469.1;Parent=gene-LVR01_04145;Dbxref=NCBI_GP:MCE2618469.1;Name=MCE2618469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397288.1;locus_tag=LVR01_04145;product=DUF951 family protein;protein_id=MCE2618469.1;transl_table=11 JAJSBG010000010.1 Genbank gene 12464 13600 . - . ID=gene-LVR01_04150;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LVR01_04150 JAJSBG010000010.1 Protein Homology CDS 12464 13600 . - 0 ID=cds-MCE2618470.1;Parent=gene-LVR01_04150;Dbxref=NCBI_GP:MCE2618470.1;Name=MCE2618470.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581170.1;locus_tag=LVR01_04150;product=DNA polymerase III subunit beta;protein_id=MCE2618470.1;transl_table=11 JAJSBG010000010.1 Genbank gene 13759 15120 . - . ID=gene-LVR01_04155;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LVR01_04155 JAJSBG010000010.1 Protein Homology CDS 13759 15120 . - 0 ID=cds-MCE2618471.1;Parent=gene-LVR01_04155;Dbxref=NCBI_GP:MCE2618471.1;Name=MCE2618471.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255267.1;locus_tag=LVR01_04155;product=chromosomal replication initiator protein DnaA;protein_id=MCE2618471.1;transl_table=11 JAJSBG010000010.1 Genbank gene 15333 16091 . - . ID=gene-LVR01_04160;Name=LVR01_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04160 JAJSBG010000010.1 Protein Homology CDS 15333 16091 . - 0 ID=cds-MCE2618472.1;Parent=gene-LVR01_04160;Dbxref=NCBI_GP:MCE2618472.1;Name=MCE2618472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410347.1;locus_tag=LVR01_04160;product=ParB/RepB/Spo0J family partition protein;protein_id=MCE2618472.1;transl_table=11 JAJSBG010000010.1 Genbank gene 16149 17330 . - . ID=gene-LVR01_04165;Name=LVR01_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04165 JAJSBG010000010.1 Protein Homology CDS 16149 17330 . - 0 ID=cds-MCE2618473.1;Parent=gene-LVR01_04165;Dbxref=NCBI_GP:MCE2618473.1;Name=MCE2618473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681590.1;locus_tag=LVR01_04165;product=S1C family serine protease;protein_id=MCE2618473.1;transl_table=11 JAJSBG010000010.1 Genbank gene 17513 17992 . + . ID=gene-LVR01_04170;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LVR01_04170 JAJSBG010000010.1 Protein Homology CDS 17513 17992 . + 0 ID=cds-MCE2618474.1;Parent=gene-LVR01_04170;Dbxref=NCBI_GP:MCE2618474.1;Name=MCE2618474.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695929.1;locus_tag=LVR01_04170;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=MCE2618474.1;transl_table=11 JAJSBG010000010.1 Genbank gene 18033 18106 . + . ID=gene-LVR01_04175;Name=LVR01_04175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_04175 JAJSBG010000010.1 tRNAscan-SE tRNA 18033 18106 . + . ID=rna-LVR01_04175;Parent=gene-LVR01_04175;anticodon=(pos:18067..18069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04175;product=tRNA-Arg JAJSBG010000010.1 tRNAscan-SE exon 18033 18106 . + . ID=exon-LVR01_04175-1;Parent=rna-LVR01_04175;anticodon=(pos:18067..18069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04175;product=tRNA-Arg JAJSBG010000010.1 Genbank gene 18271 18396 . + . ID=gene-LVR01_04180;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=LVR01_04180 JAJSBG010000010.1 Protein Homology CDS 18271 18396 . + 0 ID=cds-MCE2618475.1;Parent=gene-LVR01_04180;Dbxref=NCBI_GP:MCE2618475.1;Name=MCE2618475.1;gbkey=CDS;gene=comC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799689.1;locus_tag=LVR01_04180;product=competence-stimulating peptide ComC;protein_id=MCE2618475.1;transl_table=11 JAJSBG010000010.1 Genbank gene 18417 19742 . + . ID=gene-LVR01_04185;Name=comD;gbkey=Gene;gene=comD;gene_biotype=protein_coding;locus_tag=LVR01_04185 JAJSBG010000010.1 Protein Homology CDS 18417 19742 . + 0 ID=cds-MCE2618476.1;Parent=gene-LVR01_04185;Dbxref=NCBI_GP:MCE2618476.1;Name=MCE2618476.1;gbkey=CDS;gene=comD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362880.1;locus_tag=LVR01_04185;product=competence system sensor histidine kinase ComD;protein_id=MCE2618476.1;transl_table=11 JAJSBG010000010.1 Genbank gene 19739 20491 . + . ID=gene-LVR01_04190;Name=comE;gbkey=Gene;gene=comE;gene_biotype=protein_coding;locus_tag=LVR01_04190 JAJSBG010000010.1 Protein Homology CDS 19739 20491 . + 0 ID=cds-MCE2618477.1;Parent=gene-LVR01_04190;Dbxref=NCBI_GP:MCE2618477.1;Name=MCE2618477.1;gbkey=CDS;gene=comE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866065.1;locus_tag=LVR01_04190;product=competence system response regulator transcription factor ComE;protein_id=MCE2618477.1;transl_table=11 JAJSBG010000010.1 Genbank gene 20543 20614 . + . ID=gene-LVR01_04195;Name=LVR01_04195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_04195 JAJSBG010000010.1 tRNAscan-SE tRNA 20543 20614 . + . ID=rna-LVR01_04195;Parent=gene-LVR01_04195;anticodon=(pos:20576..20578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04195;product=tRNA-Glu JAJSBG010000010.1 tRNAscan-SE exon 20543 20614 . + . ID=exon-LVR01_04195-1;Parent=rna-LVR01_04195;anticodon=(pos:20576..20578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04195;product=tRNA-Glu JAJSBG010000010.1 Genbank gene 20620 20693 . + . ID=gene-LVR01_04200;Name=LVR01_04200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_04200 JAJSBG010000010.1 tRNAscan-SE tRNA 20620 20693 . + . ID=rna-LVR01_04200;Parent=gene-LVR01_04200;anticodon=(pos:20654..20656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04200;product=tRNA-Asn JAJSBG010000010.1 tRNAscan-SE exon 20620 20693 . + . ID=exon-LVR01_04200-1;Parent=rna-LVR01_04200;anticodon=(pos:20654..20656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04200;product=tRNA-Asn JAJSBG010000010.1 Genbank gene 20734 21276 . - . ID=gene-LVR01_04205;Name=LVR01_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04205 JAJSBG010000010.1 Protein Homology CDS 20734 21276 . - 0 ID=cds-MCE2618478.1;Parent=gene-LVR01_04205;Dbxref=NCBI_GP:MCE2618478.1;Name=MCE2618478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399421.1;locus_tag=LVR01_04205;product=TetR/AcrR family transcriptional regulator C-terminal domain-containing protein;protein_id=MCE2618478.1;transl_table=11 JAJSBG010000010.1 Genbank gene 21404 24043 . + . ID=gene-LVR01_04210;Name=LVR01_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04210 JAJSBG010000010.1 Protein Homology CDS 21404 24043 . + 0 ID=cds-MCE2618479.1;Parent=gene-LVR01_04210;Dbxref=NCBI_GP:MCE2618479.1;Name=MCE2618479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472064.1;locus_tag=LVR01_04210;product=YhgE/Pip domain-containing protein;protein_id=MCE2618479.1;transl_table=11 JAJSBG010000010.1 Genbank gene 24073 26616 . - . ID=gene-LVR01_04215;Name=LVR01_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04215 JAJSBG010000010.1 Protein Homology CDS 24073 26616 . - 0 ID=cds-MCE2618480.1;Parent=gene-LVR01_04215;Dbxref=NCBI_GP:MCE2618480.1;Name=MCE2618480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861768.1;locus_tag=LVR01_04215;product=YfhO family protein;protein_id=MCE2618480.1;transl_table=11 JAJSBG010000010.1 Genbank gene 26676 28298 . - . ID=gene-LVR01_04220;Name=LVR01_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04220 JAJSBG010000010.1 Protein Homology CDS 26676 28298 . - 0 ID=cds-MCE2618481.1;Parent=gene-LVR01_04220;Dbxref=NCBI_GP:MCE2618481.1;Name=MCE2618481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511338.1;locus_tag=LVR01_04220;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618481.1;transl_table=11 JAJSBG010000010.1 Genbank gene 28504 29529 . + . ID=gene-LVR01_04225;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LVR01_04225 JAJSBG010000010.1 Protein Homology CDS 28504 29529 . + 0 ID=cds-MCE2618482.1;Parent=gene-LVR01_04225;Dbxref=NCBI_GP:MCE2618482.1;Name=MCE2618482.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165445.1;locus_tag=LVR01_04225;product=tryptophan--tRNA ligase;protein_id=MCE2618482.1;transl_table=11 JAJSBG010000010.1 Genbank gene 29681 31159 . + . ID=gene-LVR01_04230;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LVR01_04230 JAJSBG010000010.1 Protein Homology CDS 29681 31159 . + 0 ID=cds-MCE2618483.1;Parent=gene-LVR01_04230;Dbxref=NCBI_GP:MCE2618483.1;Name=MCE2618483.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073411.1;locus_tag=LVR01_04230;product=IMP dehydrogenase;protein_id=MCE2618483.1;transl_table=11 JAJSBG010000010.1 Genbank gene 31211 32308 . - . ID=gene-LVR01_04235;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LVR01_04235 JAJSBG010000010.1 Protein Homology CDS 31211 32308 . - 0 ID=cds-MCE2618484.1;Parent=gene-LVR01_04235;Dbxref=NCBI_GP:MCE2618484.1;Name=MCE2618484.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266665.1;locus_tag=LVR01_04235;product=DNA replication/repair protein RecF;protein_id=MCE2618484.1;transl_table=11 JAJSBG010000010.1 Genbank gene 32311 32679 . - . ID=gene-LVR01_04240;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LVR01_04240 JAJSBG010000010.1 Protein Homology CDS 32311 32679 . - 0 ID=cds-MCE2618485.1;Parent=gene-LVR01_04240;Dbxref=NCBI_GP:MCE2618485.1;Name=MCE2618485.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455867.1;locus_tag=LVR01_04240;product=S4 domain-containing protein YaaA;protein_id=MCE2618485.1;transl_table=11 JAJSBG010000010.1 Genbank gene 32838 34088 . + . ID=gene-LVR01_04245;Name=LVR01_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04245 JAJSBG010000010.1 Protein Homology CDS 32838 34088 . + 0 ID=cds-MCE2618486.1;Parent=gene-LVR01_04245;Dbxref=NCBI_GP:MCE2618486.1;Name=MCE2618486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424255.1;locus_tag=LVR01_04245;product=insulinase family protein;protein_id=MCE2618486.1;transl_table=11 JAJSBG010000010.1 Genbank gene 34085 35368 . + . ID=gene-LVR01_04250;Name=LVR01_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04250 JAJSBG010000010.1 Protein Homology CDS 34085 35368 . + 0 ID=cds-MCE2618487.1;Parent=gene-LVR01_04250;Dbxref=NCBI_GP:MCE2618487.1;Name=MCE2618487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269809.1;locus_tag=LVR01_04250;product=insulinase family protein;protein_id=MCE2618487.1;transl_table=11 JAJSBG010000010.1 Genbank gene 35410 36252 . + . ID=gene-LVR01_04255;Name=LVR01_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04255 JAJSBG010000010.1 Protein Homology CDS 35410 36252 . + 0 ID=cds-MCE2618488.1;Parent=gene-LVR01_04255;Dbxref=NCBI_GP:MCE2618488.1;Name=MCE2618488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398726.1;locus_tag=LVR01_04255;product=helix-turn-helix domain-containing protein;protein_id=MCE2618488.1;transl_table=11 JAJSBG010000010.1 Genbank gene 36263 36808 . + . ID=gene-LVR01_04260;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LVR01_04260 JAJSBG010000010.1 Protein Homology CDS 36263 36808 . + 0 ID=cds-MCE2618489.1;Parent=gene-LVR01_04260;Dbxref=NCBI_GP:MCE2618489.1;Name=MCE2618489.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712151.1;locus_tag=LVR01_04260;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=MCE2618489.1;transl_table=11 JAJSBG010000010.1 Genbank gene 36805 37632 . + . ID=gene-LVR01_04265;Name=LVR01_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04265 JAJSBG010000010.1 Protein Homology CDS 36805 37632 . + 0 ID=cds-MCE2618490.1;Parent=gene-LVR01_04265;Dbxref=NCBI_GP:MCE2618490.1;Name=MCE2618490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269806.1;locus_tag=LVR01_04265;product=energy-coupling factor transporter ATPase;protein_id=MCE2618490.1;transl_table=11 JAJSBG010000010.1 Genbank gene 37617 38456 . + . ID=gene-LVR01_04270;Name=LVR01_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04270 JAJSBG010000010.1 Protein Homology CDS 37617 38456 . + 0 ID=cds-MCE2618491.1;Parent=gene-LVR01_04270;Dbxref=NCBI_GP:MCE2618491.1;Name=MCE2618491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510406.1;locus_tag=LVR01_04270;product=energy-coupling factor transporter ATPase;protein_id=MCE2618491.1;transl_table=11 JAJSBG010000010.1 Genbank gene 38449 39243 . + . ID=gene-LVR01_04275;Name=LVR01_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04275 JAJSBG010000010.1 Protein Homology CDS 38449 39243 . + 0 ID=cds-MCE2618492.1;Parent=gene-LVR01_04275;Dbxref=NCBI_GP:MCE2618492.1;Name=MCE2618492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377903.1;locus_tag=LVR01_04275;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCE2618492.1;transl_table=11 JAJSBG010000010.1 Genbank gene 39303 40121 . + . ID=gene-LVR01_04280;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LVR01_04280 JAJSBG010000010.1 Protein Homology CDS 39303 40121 . + 0 ID=cds-MCE2618493.1;Parent=gene-LVR01_04280;Dbxref=NCBI_GP:MCE2618493.1;Name=MCE2618493.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001078980.1;locus_tag=LVR01_04280;product=rod shape-determining protein MreC;protein_id=MCE2618493.1;transl_table=11 JAJSBG010000010.1 Genbank gene 40121 40615 . + . ID=gene-LVR01_04285;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LVR01_04285 JAJSBG010000010.1 Protein Homology CDS 40121 40615 . + 0 ID=cds-MCE2618494.1;Parent=gene-LVR01_04285;Dbxref=NCBI_GP:MCE2618494.1;Name=MCE2618494.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001249461.1;locus_tag=LVR01_04285;product=rod shape-determining protein MreD;protein_id=MCE2618494.1;transl_table=11 JAJSBG010000010.1 Genbank gene 40709 41887 . + . ID=gene-LVR01_04290;Name=LVR01_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04290 JAJSBG010000010.1 Protein Homology CDS 40709 41887 . + 0 ID=cds-MCE2618495.1;Parent=gene-LVR01_04290;Dbxref=NCBI_GP:MCE2618495.1;Name=MCE2618495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727004.1;locus_tag=LVR01_04290;product=CHAP domain-containing protein;protein_id=MCE2618495.1;transl_table=11 JAJSBG010000010.1 Genbank gene 42110 42889 . + . ID=gene-LVR01_04295;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LVR01_04295 JAJSBG010000010.1 Protein Homology CDS 42110 42889 . + 0 ID=cds-MCE2618496.1;Parent=gene-LVR01_04295;Dbxref=NCBI_GP:MCE2618496.1;Name=MCE2618496.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268478.1;locus_tag=LVR01_04295;product=30S ribosomal protein S2;protein_id=MCE2618496.1;transl_table=11 JAJSBG010000010.1 Genbank gene 42969 44009 . + . ID=gene-LVR01_04300;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LVR01_04300 JAJSBG010000010.1 Protein Homology CDS 42969 44009 . + 0 ID=cds-MCE2618497.1;Parent=gene-LVR01_04300;Dbxref=NCBI_GP:MCE2618497.1;Name=MCE2618497.1;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003053075.1;locus_tag=LVR01_04300;product=translation elongation factor Ts;protein_id=MCE2618497.1;transl_table=11 JAJSBG010000010.1 Genbank gene 44131 45057 . - . ID=gene-LVR01_04305;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LVR01_04305 JAJSBG010000010.1 Protein Homology CDS 44131 45057 . - 0 ID=cds-MCE2618498.1;Parent=gene-LVR01_04305;Dbxref=NCBI_GP:MCE2618498.1;Name=MCE2618498.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255317.1;locus_tag=LVR01_04305;product=cysteine synthase A;protein_id=MCE2618498.1;transl_table=11 JAJSBG010000010.1 Genbank gene 45342 45977 . - . ID=gene-LVR01_04310;Name=LVR01_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04310 JAJSBG010000010.1 Protein Homology CDS 45342 45977 . - 0 ID=cds-MCE2618499.1;Parent=gene-LVR01_04310;Dbxref=NCBI_GP:MCE2618499.1;Name=MCE2618499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000395753.1;locus_tag=LVR01_04310;product=YigZ family protein;protein_id=MCE2618499.1;transl_table=11 JAJSBG010000010.1 Genbank gene 46033 47331 . + . ID=gene-LVR01_04315;Name=LVR01_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04315 JAJSBG010000010.1 Protein Homology CDS 46033 47331 . + 0 ID=cds-MCE2618500.1;Parent=gene-LVR01_04315;Dbxref=NCBI_GP:MCE2618500.1;Name=MCE2618500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867598.1;locus_tag=LVR01_04315;product=DEAD/DEAH box helicase;protein_id=MCE2618500.1;transl_table=11 JAJSBG010000010.1 Genbank gene 47328 47990 . + . ID=gene-LVR01_04320;Name=LVR01_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04320 JAJSBG010000010.1 Protein Homology CDS 47328 47990 . + 0 ID=cds-MCE2618501.1;Parent=gene-LVR01_04320;Dbxref=NCBI_GP:MCE2618501.1;Name=MCE2618501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649954.1;locus_tag=LVR01_04320;product=ComF family protein;protein_id=MCE2618501.1;transl_table=11 JAJSBG010000010.1 Genbank gene 48070 48618 . + . ID=gene-LVR01_04325;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LVR01_04325 JAJSBG010000010.1 Protein Homology CDS 48070 48618 . + 0 ID=cds-MCE2618502.1;Parent=gene-LVR01_04325;Dbxref=NCBI_GP:MCE2618502.1;Name=MCE2618502.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599099.1;locus_tag=LVR01_04325;product=ribosome-associated translation inhibitor RaiA;protein_id=MCE2618502.1;transl_table=11 JAJSBG010000010.1 Genbank gene 48754 50727 . + . ID=gene-LVR01_04330;Name=LVR01_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04330 JAJSBG010000010.1 Protein Homology CDS 48754 50727 . + 0 ID=cds-MCE2618503.1;Parent=gene-LVR01_04330;Dbxref=NCBI_GP:MCE2618503.1;Name=MCE2618503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255323.1;locus_tag=LVR01_04330;product=DHH family phosphoesterase;protein_id=MCE2618503.1;transl_table=11 JAJSBG010000010.1 Genbank gene 50724 51176 . + . ID=gene-LVR01_04335;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LVR01_04335 JAJSBG010000010.1 Protein Homology CDS 50724 51176 . + 0 ID=cds-MCE2618504.1;Parent=gene-LVR01_04335;Dbxref=NCBI_GP:MCE2618504.1;Name=MCE2618504.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999581.1;locus_tag=LVR01_04335;product=50S ribosomal protein L9;protein_id=MCE2618504.1;transl_table=11 JAJSBG010000010.1 Genbank gene 51220 52572 . + . ID=gene-LVR01_04340;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LVR01_04340 JAJSBG010000010.1 Protein Homology CDS 51220 52572 . + 0 ID=cds-MCE2618505.1;Parent=gene-LVR01_04340;Dbxref=NCBI_GP:MCE2618505.1;Name=MCE2618505.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852490.1;locus_tag=LVR01_04340;product=replicative DNA helicase;protein_id=MCE2618505.1;transl_table=11 JAJSBG010000010.1 Genbank gene 52574 52840 . + . ID=gene-LVR01_04345;Name=LVR01_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04345 JAJSBG010000010.1 Protein Homology CDS 52574 52840 . + 0 ID=cds-MCE2618506.1;Parent=gene-LVR01_04345;Dbxref=NCBI_GP:MCE2618506.1;Name=MCE2618506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262439.1;locus_tag=LVR01_04345;product=hypothetical protein;protein_id=MCE2618506.1;transl_table=11 JAJSBG010000010.1 Genbank gene 52929 54047 . + . ID=gene-LVR01_04350;Name=cbpD;gbkey=Gene;gene=cbpD;gene_biotype=protein_coding;locus_tag=LVR01_04350 JAJSBG010000010.1 Protein Homology CDS 52929 54047 . + 0 ID=cds-MCE2618507.1;Parent=gene-LVR01_04350;Dbxref=NCBI_GP:MCE2618507.1;Name=MCE2618507.1;gbkey=CDS;gene=cbpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698569.1;locus_tag=LVR01_04350;product=choline binding-anchored murein hydrolase CbpD;protein_id=MCE2618507.1;transl_table=11 ##sequence-region JAJSBG010000110.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000110.1 Genbank region 1 420 . + . ID=JAJSBG010000110.1:1..420;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000110.1 Genbank gene 73 144 . - . ID=gene-LVR01_11355;Name=LVR01_11355;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11355 JAJSBG010000110.1 tRNAscan-SE tRNA 73 144 . - . ID=rna-LVR01_11355;Parent=gene-LVR01_11355;anticodon=(pos:complement(109..111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11355;product=tRNA-Glu JAJSBG010000110.1 tRNAscan-SE exon 73 144 . - . ID=exon-LVR01_11355-1;Parent=rna-LVR01_11355;anticodon=(pos:complement(109..111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11355;product=tRNA-Glu ##sequence-region JAJSBG010000111.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000111.1 Genbank region 1 419 . + . ID=JAJSBG010000111.1:1..419;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000111.1 Genbank gene 197 325 . + . ID=gene-LVR01_11360;Name=LVR01_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11360 JAJSBG010000111.1 Protein Homology CDS 197 325 . + 0 ID=cds-MCE2619735.1;Parent=gene-LVR01_11360;Dbxref=NCBI_GP:MCE2619735.1;Name=MCE2619735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658145.1;locus_tag=LVR01_11360;product=smi_0059.1 family bacteriocin-like peptide;protein_id=MCE2619735.1;transl_table=11 ##sequence-region JAJSBG010000112.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000112.1 Genbank region 1 415 . + . ID=JAJSBG010000112.1:1..415;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000112.1 Genbank pseudogene 1 415 . + . ID=gene-LVR01_11365;Name=LVR01_11365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11365;pseudo=true JAJSBG010000112.1 Protein Homology CDS 1 415 . + 0 ID=cds-LVR01_11365;Parent=gene-LVR01_11365;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_11365;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000113.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000113.1 Genbank region 1 410 . + . ID=JAJSBG010000113.1:1..410;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000113.1 Genbank pseudogene 1 410 . + . ID=gene-LVR01_11370;Name=LVR01_11370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11370;pseudo=true JAJSBG010000113.1 Protein Homology CDS 1 410 . + 2 ID=cds-LVR01_11370;Parent=gene-LVR01_11370;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558102.1;locus_tag=LVR01_11370;product=transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000114.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000114.1 Genbank region 1 405 . + . ID=JAJSBG010000114.1:1..405;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000114.1 Genbank gene 1 374 . + . ID=gene-LVR01_11375;Name=LVR01_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11375;partial=true;start_range=.,1 JAJSBG010000114.1 Protein Homology CDS 1 374 . + 2 ID=cds-MCE2619736.1;Parent=gene-LVR01_11375;Dbxref=NCBI_GP:MCE2619736.1;Name=MCE2619736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558202.1;locus_tag=LVR01_11375;partial=true;product=transposase;protein_id=MCE2619736.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000115.1 1 403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000115.1 Genbank region 1 403 . + . ID=JAJSBG010000115.1:1..403;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM ##sequence-region JAJSBG010000116.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000116.1 Genbank region 1 399 . + . ID=JAJSBG010000116.1:1..399;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000116.1 Genbank gene 38 244 . + . ID=gene-LVR01_11380;Name=LVR01_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11380 JAJSBG010000116.1 Protein Homology CDS 38 244 . + 0 ID=cds-MCE2619737.1;Parent=gene-LVR01_11380;Dbxref=NCBI_GP:MCE2619737.1;Name=MCE2619737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=LVR01_11380;product=transposase;protein_id=MCE2619737.1;transl_table=11 JAJSBG010000116.1 Genbank gene 219 399 . + . ID=gene-LVR01_11385;Name=LVR01_11385;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11385;partial=true JAJSBG010000116.1 Protein Homology CDS 219 399 . + 0 ID=cds-MCE2619738.1;Parent=gene-LVR01_11385;Dbxref=NCBI_GP:MCE2619738.1;Name=MCE2619738.1;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941577.1;locus_tag=LVR01_11385;partial=true;product=transposase;protein_id=MCE2619738.1;transl_table=11 ##sequence-region JAJSBG010000117.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000117.1 Genbank region 1 388 . + . ID=JAJSBG010000117.1:1..388;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000117.1 Genbank gene 1 386 . - . ID=gene-LVR01_11390;Name=LVR01_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11390;partial=true;start_range=.,1 JAJSBG010000117.1 Protein Homology CDS 1 386 . - 0 ID=cds-MCE2619739.1;Parent=gene-LVR01_11390;Dbxref=NCBI_GP:MCE2619739.1;Name=MCE2619739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=LVR01_11390;partial=true;product=hypothetical protein;protein_id=MCE2619739.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000118.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000118.1 Genbank region 1 387 . + . ID=JAJSBG010000118.1:1..387;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000118.1 Genbank gene 3 344 . + . ID=gene-LVR01_11395;Name=LVR01_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11395 JAJSBG010000118.1 Protein Homology CDS 3 344 . + 0 ID=cds-MCE2619740.1;Parent=gene-LVR01_11395;Dbxref=NCBI_GP:MCE2619740.1;Name=MCE2619740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=LVR01_11395;product=hypothetical protein;protein_id=MCE2619740.1;transl_table=11 ##sequence-region JAJSBG010000119.1 1 385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000119.1 Genbank region 1 385 . + . ID=JAJSBG010000119.1:1..385;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000119.1 Genbank gene 124 385 . + . ID=gene-LVR01_11400;Name=LVR01_11400;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11400;partial=true JAJSBG010000119.1 Protein Homology CDS 124 385 . + 0 ID=cds-MCE2619741.1;Parent=gene-LVR01_11400;Dbxref=NCBI_GP:MCE2619741.1;Name=MCE2619741.1;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842126.1;locus_tag=LVR01_11400;partial=true;product=transposase family protein;protein_id=MCE2619741.1;transl_table=11 ##sequence-region JAJSBG010000011.1 1 53925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000011.1 Genbank region 1 53925 . + . ID=JAJSBG010000011.1:1..53925;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000011.1 Genbank pseudogene 1 106 . - . ID=gene-LVR01_04355;Name=LVR01_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04355;pseudo=true JAJSBG010000011.1 Protein Homology CDS 1 106 . - 0 ID=cds-LVR01_04355;Parent=gene-LVR01_04355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484476.1;locus_tag=LVR01_04355;product=transposase;pseudo=true;transl_table=11 JAJSBG010000011.1 Genbank pseudogene 93 214 . - . ID=gene-LVR01_04360;Name=LVR01_04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04360;pseudo=true JAJSBG010000011.1 Protein Homology CDS 93 214 . - 0 ID=cds-LVR01_04360;Parent=gene-LVR01_04360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856457.1;locus_tag=LVR01_04360;product=ISL3 family transposase;pseudo=true;transl_table=11 JAJSBG010000011.1 Genbank gene 413 639 . - . ID=gene-LVR01_04365;Name=LVR01_04365;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04365;partial=true JAJSBG010000011.1 GeneMarkS-2+ CDS 413 639 . - 2 ID=cds-MCE2618508.1;Parent=gene-LVR01_04365;Dbxref=NCBI_GP:MCE2618508.1;Name=MCE2618508.1;end_range=639,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_04365;partial=true;product=hypothetical protein;protein_id=MCE2618508.1;transl_table=11 JAJSBG010000011.1 Genbank gene 773 3252 . + . ID=gene-LVR01_04370;Name=LVR01_04370;end_range=3252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04370;partial=true JAJSBG010000011.1 GeneMarkS-2+ CDS 773 3252 . + 0 ID=cds-MCE2618509.1;Parent=gene-LVR01_04370;Dbxref=NCBI_GP:MCE2618509.1;Name=MCE2618509.1;end_range=3252,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_04370;partial=true;product=cell wall-binding protein;protein_id=MCE2618509.1;transl_table=11 JAJSBG010000011.1 Genbank gene 3353 3783 . + . ID=gene-LVR01_04375;Name=LVR01_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04375;partial=true;start_range=.,3353 JAJSBG010000011.1 Protein Homology CDS 3353 3783 . + 2 ID=cds-MCE2618510.1;Parent=gene-LVR01_04375;Dbxref=NCBI_GP:MCE2618510.1;Name=MCE2618510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458188.1;locus_tag=LVR01_04375;partial=true;product=hypothetical protein;protein_id=MCE2618510.1;start_range=.,3353;transl_table=11 JAJSBG010000011.1 Genbank pseudogene 3987 4121 . + . ID=gene-LVR01_04380;Name=LVR01_04380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04380;pseudo=true JAJSBG010000011.1 Protein Homology CDS 3987 4121 . + 0 ID=cds-LVR01_04380;Parent=gene-LVR01_04380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816585.1;locus_tag=LVR01_04380;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000011.1 Genbank gene 4428 5201 . + . ID=gene-LVR01_04385;Name=LVR01_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04385 JAJSBG010000011.1 Protein Homology CDS 4428 5201 . + 0 ID=cds-MCE2618511.1;Parent=gene-LVR01_04385;Dbxref=NCBI_GP:MCE2618511.1;Name=MCE2618511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000575597.1;locus_tag=LVR01_04385;product=TatD family hydrolase;protein_id=MCE2618511.1;transl_table=11 JAJSBG010000011.1 Genbank gene 5201 5761 . + . ID=gene-LVR01_04390;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=LVR01_04390 JAJSBG010000011.1 Protein Homology CDS 5201 5761 . + 0 ID=cds-MCE2618512.1;Parent=gene-LVR01_04390;Dbxref=NCBI_GP:MCE2618512.1;Name=MCE2618512.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660004.1;locus_tag=LVR01_04390;product=ribonuclease M5;protein_id=MCE2618512.1;transl_table=11 JAJSBG010000011.1 Genbank gene 5833 6732 . + . ID=gene-LVR01_04395;Name=LVR01_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04395 JAJSBG010000011.1 Protein Homology CDS 5833 6732 . + 0 ID=cds-MCE2618513.1;Parent=gene-LVR01_04395;Dbxref=NCBI_GP:MCE2618513.1;Name=MCE2618513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904853.1;locus_tag=LVR01_04395;product=XRE family transcriptional regulator;protein_id=MCE2618513.1;transl_table=11 JAJSBG010000011.1 Genbank pseudogene 7001 8422 . + . ID=gene-LVR01_04400;Name=LVR01_04400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04400;pseudo=true JAJSBG010000011.1 Protein Homology CDS 7001 8422 . + 0 ID=cds-LVR01_04400;Parent=gene-LVR01_04400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825281.1;locus_tag=LVR01_04400;product=bacteriocin-associated integral membrane family protein;pseudo=true;transl_table=11 JAJSBG010000011.1 Genbank gene 8522 9688 . - . ID=gene-LVR01_04405;Name=LVR01_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04405 JAJSBG010000011.1 Protein Homology CDS 8522 9688 . - 0 ID=cds-MCE2618514.1;Parent=gene-LVR01_04405;Dbxref=NCBI_GP:MCE2618514.1;Name=MCE2618514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704683.1;locus_tag=LVR01_04405;product=site-specific integrase;protein_id=MCE2618514.1;transl_table=11 JAJSBG010000011.1 Genbank gene 9963 10631 . - . ID=gene-LVR01_04410;Name=LVR01_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04410 JAJSBG010000011.1 Protein Homology CDS 9963 10631 . - 0 ID=cds-MCE2618515.1;Parent=gene-LVR01_04410;Dbxref=NCBI_GP:MCE2618515.1;Name=MCE2618515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659321.1;locus_tag=LVR01_04410;product=Fic family protein;protein_id=MCE2618515.1;transl_table=11 JAJSBG010000011.1 Genbank gene 10770 11510 . - . ID=gene-LVR01_04415;Name=LVR01_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04415 JAJSBG010000011.1 Protein Homology CDS 10770 11510 . - 0 ID=cds-MCE2618516.1;Parent=gene-LVR01_04415;Dbxref=NCBI_GP:MCE2618516.1;Name=MCE2618516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089759.1;locus_tag=LVR01_04415;product=helix-turn-helix domain-containing protein;protein_id=MCE2618516.1;transl_table=11 JAJSBG010000011.1 Genbank gene 11691 11912 . + . ID=gene-LVR01_04420;Name=LVR01_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04420 JAJSBG010000011.1 Protein Homology CDS 11691 11912 . + 0 ID=cds-MCE2618517.1;Parent=gene-LVR01_04420;Dbxref=NCBI_GP:MCE2618517.1;Name=MCE2618517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000217789.1;locus_tag=LVR01_04420;product=helix-turn-helix domain-containing protein;protein_id=MCE2618517.1;transl_table=11 JAJSBG010000011.1 Genbank gene 12014 12199 . + . ID=gene-LVR01_04425;Name=LVR01_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04425 JAJSBG010000011.1 Protein Homology CDS 12014 12199 . + 0 ID=cds-MCE2618518.1;Parent=gene-LVR01_04425;Dbxref=NCBI_GP:MCE2618518.1;Name=MCE2618518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009512.1;locus_tag=LVR01_04425;product=hypothetical protein;protein_id=MCE2618518.1;transl_table=11 JAJSBG010000011.1 Genbank gene 12437 12610 . + . ID=gene-LVR01_04430;Name=LVR01_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04430 JAJSBG010000011.1 Protein Homology CDS 12437 12610 . + 0 ID=cds-MCE2618519.1;Parent=gene-LVR01_04430;Dbxref=NCBI_GP:MCE2618519.1;Name=MCE2618519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130088.1;locus_tag=LVR01_04430;product=CopG family transcriptional regulator;protein_id=MCE2618519.1;transl_table=11 JAJSBG010000011.1 Genbank gene 12765 13172 . + . ID=gene-LVR01_04435;Name=LVR01_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04435 JAJSBG010000011.1 Protein Homology CDS 12765 13172 . + 0 ID=cds-MCE2618520.1;Parent=gene-LVR01_04435;Dbxref=NCBI_GP:MCE2618520.1;Name=MCE2618520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517977.1;locus_tag=LVR01_04435;product=hypothetical protein;protein_id=MCE2618520.1;transl_table=11 JAJSBG010000011.1 Genbank gene 13353 13862 . + . ID=gene-LVR01_04440;Name=LVR01_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04440 JAJSBG010000011.1 Protein Homology CDS 13353 13862 . + 0 ID=cds-MCE2618521.1;Parent=gene-LVR01_04440;Dbxref=NCBI_GP:MCE2618521.1;Name=MCE2618521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559720.1;locus_tag=LVR01_04440;product=hypothetical protein;protein_id=MCE2618521.1;transl_table=11 JAJSBG010000011.1 Genbank gene 13864 14079 . + . ID=gene-LVR01_04445;Name=LVR01_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04445 JAJSBG010000011.1 Protein Homology CDS 13864 14079 . + 0 ID=cds-MCE2618522.1;Parent=gene-LVR01_04445;Dbxref=NCBI_GP:MCE2618522.1;Name=MCE2618522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003747.1;locus_tag=LVR01_04445;product=hypothetical protein;protein_id=MCE2618522.1;transl_table=11 JAJSBG010000011.1 Genbank gene 14076 14372 . + . ID=gene-LVR01_04450;Name=LVR01_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04450 JAJSBG010000011.1 Protein Homology CDS 14076 14372 . + 0 ID=cds-MCE2618523.1;Parent=gene-LVR01_04450;Dbxref=NCBI_GP:MCE2618523.1;Name=MCE2618523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106820.1;locus_tag=LVR01_04450;product=hypothetical protein;protein_id=MCE2618523.1;transl_table=11 JAJSBG010000011.1 Genbank gene 14350 14691 . + . ID=gene-LVR01_04455;Name=LVR01_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04455 JAJSBG010000011.1 Protein Homology CDS 14350 14691 . + 0 ID=cds-MCE2618524.1;Parent=gene-LVR01_04455;Dbxref=NCBI_GP:MCE2618524.1;Name=MCE2618524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058847.1;locus_tag=LVR01_04455;product=DNA-binding protein;protein_id=MCE2618524.1;transl_table=11 JAJSBG010000011.1 Genbank gene 14684 14956 . + . ID=gene-LVR01_04460;Name=LVR01_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04460 JAJSBG010000011.1 Protein Homology CDS 14684 14956 . + 0 ID=cds-MCE2618525.1;Parent=gene-LVR01_04460;Dbxref=NCBI_GP:MCE2618525.1;Name=MCE2618525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492129.1;locus_tag=LVR01_04460;product=hypothetical protein;protein_id=MCE2618525.1;transl_table=11 JAJSBG010000011.1 Genbank gene 14953 15468 . + . ID=gene-LVR01_04465;Name=LVR01_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04465 JAJSBG010000011.1 Protein Homology CDS 14953 15468 . + 0 ID=cds-MCE2618526.1;Parent=gene-LVR01_04465;Dbxref=NCBI_GP:MCE2618526.1;Name=MCE2618526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263812.1;locus_tag=LVR01_04465;product=hypothetical protein;protein_id=MCE2618526.1;transl_table=11 JAJSBG010000011.1 Genbank gene 15461 16984 . + . ID=gene-LVR01_04470;Name=LVR01_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04470 JAJSBG010000011.1 Protein Homology CDS 15461 16984 . + 0 ID=cds-MCE2618527.1;Parent=gene-LVR01_04470;Dbxref=NCBI_GP:MCE2618527.1;Name=MCE2618527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087512.1;locus_tag=LVR01_04470;product=phage/plasmid primase%2C P4 family;protein_id=MCE2618527.1;transl_table=11 JAJSBG010000011.1 Genbank gene 17313 17480 . + . ID=gene-LVR01_04475;Name=LVR01_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04475 JAJSBG010000011.1 Protein Homology CDS 17313 17480 . + 0 ID=cds-MCE2618528.1;Parent=gene-LVR01_04475;Dbxref=NCBI_GP:MCE2618528.1;Name=MCE2618528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865230.1;locus_tag=LVR01_04475;product=hypothetical protein;protein_id=MCE2618528.1;transl_table=11 JAJSBG010000011.1 Genbank gene 17562 17720 . + . ID=gene-LVR01_04480;Name=LVR01_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04480 JAJSBG010000011.1 Protein Homology CDS 17562 17720 . + 0 ID=cds-MCE2618529.1;Parent=gene-LVR01_04480;Dbxref=NCBI_GP:MCE2618529.1;Name=MCE2618529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021566.2;locus_tag=LVR01_04480;product=DUF2292 domain-containing protein;protein_id=MCE2618529.1;transl_table=11 JAJSBG010000011.1 Genbank gene 17744 18403 . + . ID=gene-LVR01_04485;Name=LVR01_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04485 JAJSBG010000011.1 Protein Homology CDS 17744 18403 . + 0 ID=cds-MCE2618530.1;Parent=gene-LVR01_04485;Dbxref=NCBI_GP:MCE2618530.1;Name=MCE2618530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864281.1;locus_tag=LVR01_04485;product=hypothetical protein;protein_id=MCE2618530.1;transl_table=11 JAJSBG010000011.1 Genbank gene 18403 18633 . + . ID=gene-LVR01_04490;Name=LVR01_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04490 JAJSBG010000011.1 Protein Homology CDS 18403 18633 . + 0 ID=cds-MCE2618531.1;Parent=gene-LVR01_04490;Dbxref=NCBI_GP:MCE2618531.1;Name=MCE2618531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000650801.1;locus_tag=LVR01_04490;product=hypothetical protein;protein_id=MCE2618531.1;transl_table=11 JAJSBG010000011.1 Genbank gene 18697 18963 . + . ID=gene-LVR01_04495;Name=LVR01_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04495 JAJSBG010000011.1 Protein Homology CDS 18697 18963 . + 0 ID=cds-MCE2618532.1;Parent=gene-LVR01_04495;Dbxref=NCBI_GP:MCE2618532.1;Name=MCE2618532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252562.1;locus_tag=LVR01_04495;product=hypothetical protein;protein_id=MCE2618532.1;transl_table=11 JAJSBG010000011.1 Genbank gene 19014 19355 . + . ID=gene-LVR01_04500;Name=LVR01_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04500 JAJSBG010000011.1 Protein Homology CDS 19014 19355 . + 0 ID=cds-MCE2618533.1;Parent=gene-LVR01_04500;Dbxref=NCBI_GP:MCE2618533.1;Name=MCE2618533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035041.1;locus_tag=LVR01_04500;product=replication protein;protein_id=MCE2618533.1;transl_table=11 JAJSBG010000011.1 Genbank gene 19342 19590 . + . ID=gene-LVR01_04505;Name=LVR01_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04505 JAJSBG010000011.1 Protein Homology CDS 19342 19590 . + 0 ID=cds-MCE2618534.1;Parent=gene-LVR01_04505;Dbxref=NCBI_GP:MCE2618534.1;Name=MCE2618534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644290.1;locus_tag=LVR01_04505;product=hypothetical protein;protein_id=MCE2618534.1;transl_table=11 JAJSBG010000011.1 Genbank gene 19726 20118 . + . ID=gene-LVR01_04510;Name=LVR01_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04510 JAJSBG010000011.1 Protein Homology CDS 19726 20118 . + 0 ID=cds-MCE2618535.1;Parent=gene-LVR01_04510;Dbxref=NCBI_GP:MCE2618535.1;Name=MCE2618535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417885.1;locus_tag=LVR01_04510;product=transcriptional regulator;protein_id=MCE2618535.1;transl_table=11 JAJSBG010000011.1 Genbank gene 20321 20506 . + . ID=gene-LVR01_04515;Name=LVR01_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04515 JAJSBG010000011.1 Protein Homology CDS 20321 20506 . + 0 ID=cds-MCE2618536.1;Parent=gene-LVR01_04515;Dbxref=NCBI_GP:MCE2618536.1;Name=MCE2618536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139836.1;locus_tag=LVR01_04515;product=type II toxin-antitoxin system HicA family toxin;protein_id=MCE2618536.1;transl_table=11 JAJSBG010000011.1 Genbank gene 20554 20958 . + . ID=gene-LVR01_04520;Name=LVR01_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04520 JAJSBG010000011.1 Protein Homology CDS 20554 20958 . + 0 ID=cds-MCE2618537.1;Parent=gene-LVR01_04520;Dbxref=NCBI_GP:MCE2618537.1;Name=MCE2618537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000878125.1;locus_tag=LVR01_04520;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MCE2618537.1;transl_table=11 JAJSBG010000011.1 Genbank pseudogene 21210 21821 . + . ID=gene-LVR01_04525;Name=LVR01_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04525;pseudo=true JAJSBG010000011.1 Protein Homology CDS 21210 21821 . + 0 ID=cds-LVR01_04525;Parent=gene-LVR01_04525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825281.1;locus_tag=LVR01_04525;product=DUF1430 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000011.1 Genbank gene 21823 22464 . + . ID=gene-LVR01_04530;Name=LVR01_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04530 JAJSBG010000011.1 Protein Homology CDS 21823 22464 . + 0 ID=cds-MCE2618538.1;Parent=gene-LVR01_04530;Dbxref=NCBI_GP:MCE2618538.1;Name=MCE2618538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565534.1;locus_tag=LVR01_04530;product=ABC transporter ATP-binding protein;protein_id=MCE2618538.1;transl_table=11 JAJSBG010000011.1 Genbank gene 22457 22750 . + . ID=gene-LVR01_04535;Name=LVR01_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04535 JAJSBG010000011.1 Protein Homology CDS 22457 22750 . + 0 ID=cds-MCE2618539.1;Parent=gene-LVR01_04535;Dbxref=NCBI_GP:MCE2618539.1;Name=MCE2618539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000333255.1;locus_tag=LVR01_04535;product=hypothetical protein;protein_id=MCE2618539.1;transl_table=11 JAJSBG010000011.1 Genbank gene 23049 23921 . + . ID=gene-LVR01_04540;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LVR01_04540 JAJSBG010000011.1 Protein Homology CDS 23049 23921 . + 0 ID=cds-MCE2618540.1;Parent=gene-LVR01_04540;Dbxref=NCBI_GP:MCE2618540.1;Name=MCE2618540.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519622.1;locus_tag=LVR01_04540;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=MCE2618540.1;transl_table=11 JAJSBG010000011.1 Genbank gene 23923 24801 . + . ID=gene-LVR01_04545;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LVR01_04545 JAJSBG010000011.1 Protein Homology CDS 23923 24801 . + 0 ID=cds-MCE2618541.1;Parent=gene-LVR01_04545;Dbxref=NCBI_GP:MCE2618541.1;Name=MCE2618541.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466872.1;locus_tag=LVR01_04545;product=ribosome small subunit-dependent GTPase A;protein_id=MCE2618541.1;transl_table=11 JAJSBG010000011.1 Genbank gene 24812 25468 . + . ID=gene-LVR01_04550;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LVR01_04550 JAJSBG010000011.1 Protein Homology CDS 24812 25468 . + 0 ID=cds-MCE2618542.1;Parent=gene-LVR01_04550;Dbxref=NCBI_GP:MCE2618542.1;Name=MCE2618542.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522408.1;locus_tag=LVR01_04550;product=ribulose-phosphate 3-epimerase;protein_id=MCE2618542.1;transl_table=11 JAJSBG010000011.1 Genbank gene 25431 26093 . + . ID=gene-LVR01_04555;Name=LVR01_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04555 JAJSBG010000011.1 Protein Homology CDS 25431 26093 . + 0 ID=cds-MCE2618543.1;Parent=gene-LVR01_04555;Dbxref=NCBI_GP:MCE2618543.1;Name=MCE2618543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006147.1;locus_tag=LVR01_04555;product=thiamine diphosphokinase;protein_id=MCE2618543.1;transl_table=11 JAJSBG010000011.1 Genbank gene 26095 27351 . + . ID=gene-LVR01_04560;Name=LVR01_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04560 JAJSBG010000011.1 Protein Homology CDS 26095 27351 . + 0 ID=cds-MCE2618544.1;Parent=gene-LVR01_04560;Dbxref=NCBI_GP:MCE2618544.1;Name=MCE2618544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444769.1;locus_tag=LVR01_04560;product=DNA recombination protein RmuC;protein_id=MCE2618544.1;transl_table=11 JAJSBG010000011.1 Genbank gene 27341 28285 . + . ID=gene-LVR01_04565;Name=LVR01_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04565 JAJSBG010000011.1 Protein Homology CDS 27341 28285 . + 0 ID=cds-MCE2618545.1;Parent=gene-LVR01_04565;Dbxref=NCBI_GP:MCE2618545.1;Name=MCE2618545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703190.1;locus_tag=LVR01_04565;product=3'-5' exoribonuclease YhaM family protein;protein_id=MCE2618545.1;transl_table=11 JAJSBG010000011.1 Genbank gene 28549 29376 . + . ID=gene-LVR01_04570;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LVR01_04570 JAJSBG010000011.1 Protein Homology CDS 28549 29376 . + 0 ID=cds-MCE2618546.1;Parent=gene-LVR01_04570;Dbxref=NCBI_GP:MCE2618546.1;Name=MCE2618546.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242125.1;locus_tag=LVR01_04570;product=pur operon repressor;protein_id=MCE2618546.1;transl_table=11 JAJSBG010000011.1 Genbank gene 29438 30688 . + . ID=gene-LVR01_04575;Name=LVR01_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04575 JAJSBG010000011.1 Protein Homology CDS 29438 30688 . + 0 ID=cds-MCE2618547.1;Parent=gene-LVR01_04575;Dbxref=NCBI_GP:MCE2618547.1;Name=MCE2618547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000856498.1;locus_tag=LVR01_04575;product=diaminopimelate decarboxylase;protein_id=MCE2618547.1;transl_table=11 JAJSBG010000011.1 Genbank gene 30814 31608 . + . ID=gene-LVR01_04580;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=LVR01_04580 JAJSBG010000011.1 Protein Homology CDS 30814 31608 . + 0 ID=cds-MCE2618548.1;Parent=gene-LVR01_04580;Dbxref=NCBI_GP:MCE2618548.1;Name=MCE2618548.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288284.1;locus_tag=LVR01_04580;product=pyruvate formate lyase-activating protein;protein_id=MCE2618548.1;transl_table=11 JAJSBG010000011.1 Genbank gene 31683 32609 . - . ID=gene-LVR01_04585;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LVR01_04585 JAJSBG010000011.1 Protein Homology CDS 31683 32609 . - 0 ID=cds-MCE2618549.1;Parent=gene-LVR01_04585;Dbxref=NCBI_GP:MCE2618549.1;Name=MCE2618549.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835957.1;locus_tag=LVR01_04585;product=membrane protein insertase YidC;protein_id=MCE2618549.1;transl_table=11 JAJSBG010000011.1 Genbank gene 32687 32965 . - . ID=gene-LVR01_04590;Name=LVR01_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04590 JAJSBG010000011.1 Protein Homology CDS 32687 32965 . - 0 ID=cds-MCE2618550.1;Parent=gene-LVR01_04590;Dbxref=NCBI_GP:MCE2618550.1;Name=MCE2618550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174612.1;locus_tag=LVR01_04590;product=acylphosphatase;protein_id=MCE2618550.1;transl_table=11 JAJSBG010000011.1 Genbank gene 32999 33739 . + . ID=gene-LVR01_04595;Name=LVR01_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04595 JAJSBG010000011.1 Protein Homology CDS 32999 33739 . + 0 ID=cds-MCE2618551.1;Parent=gene-LVR01_04595;Dbxref=NCBI_GP:MCE2618551.1;Name=MCE2618551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152696.1;locus_tag=LVR01_04595;product=RNA methyltransferase;protein_id=MCE2618551.1;transl_table=11 JAJSBG010000011.1 Genbank gene 33794 34477 . + . ID=gene-LVR01_04600;Name=LVR01_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04600 JAJSBG010000011.1 Protein Homology CDS 33794 34477 . + 0 ID=cds-MCE2618552.1;Parent=gene-LVR01_04600;Dbxref=NCBI_GP:MCE2618552.1;Name=MCE2618552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545711.1;locus_tag=LVR01_04600;product=Bax inhibitor-1/YccA family protein;protein_id=MCE2618552.1;transl_table=11 JAJSBG010000011.1 Genbank gene 34588 35580 . + . ID=gene-LVR01_04605;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=LVR01_04605 JAJSBG010000011.1 Protein Homology CDS 34588 35580 . + 0 ID=cds-MCE2618553.1;Parent=gene-LVR01_04605;Dbxref=NCBI_GP:MCE2618553.1;Name=MCE2618553.1;gbkey=CDS;gene=asnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502595.1;locus_tag=LVR01_04605;product=aspartate--ammonia ligase;protein_id=MCE2618553.1;transl_table=11 JAJSBG010000011.1 Genbank gene 35645 36184 . + . ID=gene-LVR01_04610;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LVR01_04610 JAJSBG010000011.1 Protein Homology CDS 35645 36184 . + 0 ID=cds-MCE2618554.1;Parent=gene-LVR01_04610;Dbxref=NCBI_GP:MCE2618554.1;Name=MCE2618554.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147838.1;locus_tag=LVR01_04610;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=MCE2618554.1;transl_table=11 JAJSBG010000011.1 Genbank gene 36174 36662 . + . ID=gene-LVR01_04615;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LVR01_04615 JAJSBG010000011.1 Protein Homology CDS 36174 36662 . + 0 ID=cds-MCE2618555.1;Parent=gene-LVR01_04615;Dbxref=NCBI_GP:MCE2618555.1;Name=MCE2618555.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280753.1;locus_tag=LVR01_04615;product=pantetheine-phosphate adenylyltransferase;protein_id=MCE2618555.1;transl_table=11 JAJSBG010000011.1 Genbank gene 36646 37683 . + . ID=gene-LVR01_04620;Name=LVR01_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04620 JAJSBG010000011.1 Protein Homology CDS 36646 37683 . + 0 ID=cds-MCE2618556.1;Parent=gene-LVR01_04620;Dbxref=NCBI_GP:MCE2618556.1;Name=MCE2618556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813016.1;locus_tag=LVR01_04620;product=PDZ domain-containing protein;protein_id=MCE2618556.1;transl_table=11 JAJSBG010000011.1 Genbank gene 37741 37971 . + . ID=gene-LVR01_04625;Name=LVR01_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04625 JAJSBG010000011.1 Protein Homology CDS 37741 37971 . + 0 ID=cds-MCE2618557.1;Parent=gene-LVR01_04625;Dbxref=NCBI_GP:MCE2618557.1;Name=MCE2618557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017351.1;locus_tag=LVR01_04625;product=DUF1146 family protein;protein_id=MCE2618557.1;transl_table=11 JAJSBG010000011.1 Genbank gene 37995 39278 . + . ID=gene-LVR01_04630;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LVR01_04630 JAJSBG010000011.1 Protein Homology CDS 37995 39278 . + 0 ID=cds-MCE2618558.1;Parent=gene-LVR01_04630;Dbxref=NCBI_GP:MCE2618558.1;Name=MCE2618558.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397009.1;locus_tag=LVR01_04630;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MCE2618558.1;transl_table=11 JAJSBG010000011.1 Genbank gene 39271 39459 . + . ID=gene-LVR01_04635;Name=LVR01_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04635 JAJSBG010000011.1 Protein Homology CDS 39271 39459 . + 0 ID=cds-MCE2618559.1;Parent=gene-LVR01_04635;Dbxref=NCBI_GP:MCE2618559.1;Name=MCE2618559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245549.1;locus_tag=LVR01_04635;product=DNA-directed RNA polymerase subunit beta;protein_id=MCE2618559.1;transl_table=11 JAJSBG010000011.1 Genbank gene 39498 40328 . + . ID=gene-LVR01_04640;Name=LVR01_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04640 JAJSBG010000011.1 Protein Homology CDS 39498 40328 . + 0 ID=cds-MCE2618560.1;Parent=gene-LVR01_04640;Dbxref=NCBI_GP:MCE2618560.1;Name=MCE2618560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036782.1;locus_tag=LVR01_04640;product=DNA/RNA non-specific endonuclease;protein_id=MCE2618560.1;transl_table=11 JAJSBG010000011.1 Genbank gene 40591 41922 . + . ID=gene-LVR01_04645;Name=LVR01_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04645 JAJSBG010000011.1 Protein Homology CDS 40591 41922 . + 0 ID=cds-MCE2618561.1;Parent=gene-LVR01_04645;Dbxref=NCBI_GP:MCE2618561.1;Name=MCE2618561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390004.1;locus_tag=LVR01_04645;product=hemolysin family protein;protein_id=MCE2618561.1;transl_table=11 JAJSBG010000011.1 Genbank gene 42111 42181 . - . ID=gene-LVR01_04650;Name=LVR01_04650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_04650 JAJSBG010000011.1 tRNAscan-SE tRNA 42111 42181 . - . ID=rna-LVR01_04650;Parent=gene-LVR01_04650;anticodon=(pos:complement(42147..42149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04650;product=tRNA-Cys JAJSBG010000011.1 tRNAscan-SE exon 42111 42181 . - . ID=exon-LVR01_04650-1;Parent=rna-LVR01_04650;anticodon=(pos:complement(42147..42149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_04650;product=tRNA-Cys JAJSBG010000011.1 Genbank gene 42597 46202 . + . ID=gene-LVR01_04655;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LVR01_04655 JAJSBG010000011.1 Protein Homology CDS 42597 46202 . + 0 ID=cds-MCE2618562.1;Parent=gene-LVR01_04655;Dbxref=NCBI_GP:MCE2618562.1;Name=MCE2618562.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907164.1;locus_tag=LVR01_04655;product=DNA-directed RNA polymerase subunit beta;protein_id=MCE2618562.1;transl_table=11 JAJSBG010000011.1 Genbank gene 46241 49918 . + . ID=gene-LVR01_04660;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LVR01_04660 JAJSBG010000011.1 Protein Homology CDS 46241 49918 . + 0 ID=cds-MCE2618563.1;Parent=gene-LVR01_04660;Dbxref=NCBI_GP:MCE2618563.1;Name=MCE2618563.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228741.1;locus_tag=LVR01_04660;product=DNA-directed RNA polymerase subunit beta';protein_id=MCE2618563.1;transl_table=11 JAJSBG010000011.1 Genbank gene 50027 50440 . + . ID=gene-LVR01_04665;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LVR01_04665 JAJSBG010000011.1 Protein Homology CDS 50027 50440 . + 0 ID=cds-MCE2618564.1;Parent=gene-LVR01_04665;Dbxref=NCBI_GP:MCE2618564.1;Name=MCE2618564.1;gbkey=CDS;gene=ndk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438285.1;locus_tag=LVR01_04665;product=nucleoside-diphosphate kinase;protein_id=MCE2618564.1;transl_table=11 JAJSBG010000011.1 Genbank gene 50688 51608 . - . ID=gene-LVR01_04670;Name=LVR01_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04670 JAJSBG010000011.1 Protein Homology CDS 50688 51608 . - 0 ID=cds-MCE2618565.1;Parent=gene-LVR01_04670;Dbxref=NCBI_GP:MCE2618565.1;Name=MCE2618565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=LVR01_04670;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2618565.1;transl_table=11 JAJSBG010000011.1 Genbank gene 51627 52568 . - . ID=gene-LVR01_04675;Name=LVR01_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04675 JAJSBG010000011.1 Protein Homology CDS 51627 52568 . - 0 ID=cds-MCE2618566.1;Parent=gene-LVR01_04675;Dbxref=NCBI_GP:MCE2618566.1;Name=MCE2618566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100143.1;locus_tag=LVR01_04675;product=trypsin-like peptidase domain-containing protein;protein_id=MCE2618566.1;transl_table=11 ##sequence-region JAJSBG010000120.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000120.1 Genbank region 1 374 . + . ID=JAJSBG010000120.1:1..374;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM ##sequence-region JAJSBG010000121.1 1 366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000121.1 Genbank region 1 366 . + . ID=JAJSBG010000121.1:1..366;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000121.1 Genbank gene 1 366 . - . ID=gene-LVR01_11405;Name=LVR01_11405;end_range=366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11405;partial=true;start_range=.,1 JAJSBG010000121.1 Protein Homology CDS 1 366 . - 1 ID=cds-MCE2619742.1;Parent=gene-LVR01_11405;Dbxref=NCBI_GP:MCE2619742.1;Name=MCE2619742.1;end_range=366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=LVR01_11405;partial=true;product=IS3 family transposase;protein_id=MCE2619742.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000122.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000122.1 Genbank region 1 363 . + . ID=JAJSBG010000122.1:1..363;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000122.1 Genbank gene 1 363 . + . ID=gene-LVR01_11410;Name=LVR01_11410;end_range=363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11410;partial=true;start_range=.,1 JAJSBG010000122.1 Protein Homology CDS 1 363 . + 1 ID=cds-MCE2619743.1;Parent=gene-LVR01_11410;Dbxref=NCBI_GP:MCE2619743.1;Name=MCE2619743.1;end_range=363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040325.1;locus_tag=LVR01_11410;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=MCE2619743.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000123.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000123.1 Genbank region 1 351 . + . ID=JAJSBG010000123.1:1..351;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000123.1 Genbank gene 29 351 . + . ID=gene-LVR01_11415;Name=LVR01_11415;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11415;partial=true JAJSBG010000123.1 Protein Homology CDS 29 351 . + 0 ID=cds-MCE2619744.1;Parent=gene-LVR01_11415;Dbxref=NCBI_GP:MCE2619744.1;Name=MCE2619744.1;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436408.1;locus_tag=LVR01_11415;partial=true;product=transposase family protein;protein_id=MCE2619744.1;transl_table=11 ##sequence-region JAJSBG010000124.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000124.1 Genbank region 1 347 . + . ID=JAJSBG010000124.1:1..347;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000124.1 Genbank gene 1 347 . - . ID=gene-LVR01_11420;Name=LVR01_11420;end_range=347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11420;partial=true;start_range=.,1 JAJSBG010000124.1 Protein Homology CDS 1 347 . - 1 ID=cds-MCE2619745.1;Parent=gene-LVR01_11420;Dbxref=NCBI_GP:MCE2619745.1;Name=MCE2619745.1;end_range=347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856457.1;locus_tag=LVR01_11420;partial=true;product=ISL3 family transposase;protein_id=MCE2619745.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000125.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000125.1 Genbank region 1 322 . + . ID=JAJSBG010000125.1:1..322;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM ##sequence-region JAJSBG010000126.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000126.1 Genbank region 1 317 . + . ID=JAJSBG010000126.1:1..317;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000126.1 Genbank gene 1 317 . + . ID=gene-LVR01_11425;Name=LVR01_11425;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11425;partial=true;start_range=.,1 JAJSBG010000126.1 Protein Homology CDS 1 317 . + 2 ID=cds-MCE2619746.1;Parent=gene-LVR01_11425;Dbxref=NCBI_GP:MCE2619746.1;Name=MCE2619746.1;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_11425;partial=true;product=G5 domain-containing protein;protein_id=MCE2619746.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000127.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000127.1 Genbank region 1 309 . + . ID=JAJSBG010000127.1:1..309;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000127.1 Genbank gene 1 309 . - . ID=gene-LVR01_11430;Name=LVR01_11430;end_range=309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11430;partial=true;start_range=.,1 JAJSBG010000127.1 Protein Homology CDS 1 309 . - 1 ID=cds-MCE2619747.1;Parent=gene-LVR01_11430;Dbxref=NCBI_GP:MCE2619747.1;Name=MCE2619747.1;end_range=309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=LVR01_11430;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=MCE2619747.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000128.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000128.1 Genbank region 1 291 . + . ID=JAJSBG010000128.1:1..291;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000128.1 Genbank gene 1 183 . + . ID=gene-LVR01_11435;Name=LVR01_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11435;partial=true;start_range=.,1 JAJSBG010000128.1 Protein Homology CDS 1 183 . + 0 ID=cds-MCE2619748.1;Parent=gene-LVR01_11435;Dbxref=NCBI_GP:MCE2619748.1;Name=MCE2619748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_11435;partial=true;product=IS630 family transposase;protein_id=MCE2619748.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000129.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000129.1 Genbank region 1 282 . + . ID=JAJSBG010000129.1:1..282;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000129.1 Genbank pseudogene 1 282 . - . ID=gene-LVR01_11440;Name=LVR01_11440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11440;pseudo=true JAJSBG010000129.1 Protein Homology CDS 1 282 . - 1 ID=cds-LVR01_11440;Parent=gene-LVR01_11440;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_11440;product=IS630 transposase-related protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000012.1 1 53896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000012.1 Genbank region 1 53896 . + . ID=JAJSBG010000012.1:1..53896;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000012.1 Genbank gene 172 366 . + . ID=gene-LVR01_04680;Name=LVR01_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04680 JAJSBG010000012.1 Protein Homology CDS 172 366 . + 0 ID=cds-MCE2618567.1;Parent=gene-LVR01_04680;Dbxref=NCBI_GP:MCE2618567.1;Name=MCE2618567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180816.1;locus_tag=LVR01_04680;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=MCE2618567.1;transl_table=11 JAJSBG010000012.1 Genbank gene 394 594 . + . ID=gene-LVR01_04685;Name=LVR01_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04685 JAJSBG010000012.1 Protein Homology CDS 394 594 . + 0 ID=cds-MCE2618568.1;Parent=gene-LVR01_04685;Dbxref=NCBI_GP:MCE2618568.1;Name=MCE2618568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478863.1;locus_tag=LVR01_04685;product=hypothetical protein;protein_id=MCE2618568.1;transl_table=11 JAJSBG010000012.1 Genbank gene 603 770 . + . ID=gene-LVR01_04690;Name=LVR01_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04690 JAJSBG010000012.1 Protein Homology CDS 603 770 . + 0 ID=cds-MCE2618569.1;Parent=gene-LVR01_04690;Dbxref=NCBI_GP:MCE2618569.1;Name=MCE2618569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284951.1;locus_tag=LVR01_04690;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=MCE2618569.1;transl_table=11 JAJSBG010000012.1 Genbank gene 774 989 . + . ID=gene-LVR01_04695;Name=LVR01_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04695 JAJSBG010000012.1 Protein Homology CDS 774 989 . + 0 ID=cds-MCE2618570.1;Parent=gene-LVR01_04695;Dbxref=NCBI_GP:MCE2618570.1;Name=MCE2618570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009755479.1;locus_tag=LVR01_04695;product=bacteriocin immunity protein;protein_id=MCE2618570.1;transl_table=11 JAJSBG010000012.1 Genbank gene 1070 1249 . + . ID=gene-LVR01_04700;Name=LVR01_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04700 JAJSBG010000012.1 Protein Homology CDS 1070 1249 . + 0 ID=cds-MCE2618571.1;Parent=gene-LVR01_04700;Dbxref=NCBI_GP:MCE2618571.1;Name=MCE2618571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846994.1;locus_tag=LVR01_04700;product=hypothetical protein;protein_id=MCE2618571.1;transl_table=11 JAJSBG010000012.1 Genbank gene 1327 1533 . + . ID=gene-LVR01_04705;Name=LVR01_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04705 JAJSBG010000012.1 Protein Homology CDS 1327 1533 . + 0 ID=cds-MCE2618572.1;Parent=gene-LVR01_04705;Dbxref=NCBI_GP:MCE2618572.1;Name=MCE2618572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673799.1;locus_tag=LVR01_04705;product=bacteriocin immunity protein;protein_id=MCE2618572.1;transl_table=11 JAJSBG010000012.1 Genbank gene 1935 2129 . + . ID=gene-LVR01_04710;Name=LVR01_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04710 JAJSBG010000012.1 Protein Homology CDS 1935 2129 . + 0 ID=cds-MCE2618573.1;Parent=gene-LVR01_04710;Dbxref=NCBI_GP:MCE2618573.1;Name=MCE2618573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757183.1;locus_tag=LVR01_04710;product=hypothetical protein;protein_id=MCE2618573.1;transl_table=11 JAJSBG010000012.1 Genbank gene 2150 3043 . + . ID=gene-LVR01_04715;Name=LVR01_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04715 JAJSBG010000012.1 Protein Homology CDS 2150 3043 . + 0 ID=cds-MCE2618574.1;Parent=gene-LVR01_04715;Dbxref=NCBI_GP:MCE2618574.1;Name=MCE2618574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343891.1;locus_tag=LVR01_04715;product=XRE family transcriptional regulator;protein_id=MCE2618574.1;transl_table=11 JAJSBG010000012.1 Genbank gene 3586 3882 . + . ID=gene-LVR01_04720;Name=LVR01_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04720 JAJSBG010000012.1 Protein Homology CDS 3586 3882 . + 0 ID=cds-MCE2618575.1;Parent=gene-LVR01_04720;Dbxref=NCBI_GP:MCE2618575.1;Name=MCE2618575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837727.1;locus_tag=LVR01_04720;product=uberolysin/carnocyclin family circular bacteriocin;protein_id=MCE2618575.1;transl_table=11 JAJSBG010000012.1 Genbank gene 3889 5025 . + . ID=gene-LVR01_04725;Name=LVR01_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04725 JAJSBG010000012.1 Protein Homology CDS 3889 5025 . + 0 ID=cds-MCE2618576.1;Parent=gene-LVR01_04725;Dbxref=NCBI_GP:MCE2618576.1;Name=MCE2618576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698829.1;locus_tag=LVR01_04725;product=hypothetical protein;protein_id=MCE2618576.1;transl_table=11 JAJSBG010000012.1 Genbank gene 5022 5504 . + . ID=gene-LVR01_04730;Name=LVR01_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04730 JAJSBG010000012.1 Protein Homology CDS 5022 5504 . + 0 ID=cds-MCE2618577.1;Parent=gene-LVR01_04730;Dbxref=NCBI_GP:MCE2618577.1;Name=MCE2618577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232094.1;locus_tag=LVR01_04730;product=stage II sporulation protein M;protein_id=MCE2618577.1;transl_table=11 JAJSBG010000012.1 Genbank gene 5501 6097 . + . ID=gene-LVR01_04735;Name=LVR01_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04735 JAJSBG010000012.1 Protein Homology CDS 5501 6097 . + 0 ID=cds-MCE2618578.1;Parent=gene-LVR01_04735;Dbxref=NCBI_GP:MCE2618578.1;Name=MCE2618578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687786.1;locus_tag=LVR01_04735;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618578.1;transl_table=11 JAJSBG010000012.1 Genbank gene 6078 6569 . + . ID=gene-LVR01_04740;Name=LVR01_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04740 JAJSBG010000012.1 Protein Homology CDS 6078 6569 . + 0 ID=cds-MCE2618579.1;Parent=gene-LVR01_04740;Dbxref=NCBI_GP:MCE2618579.1;Name=MCE2618579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671992.1;locus_tag=LVR01_04740;product=hypothetical protein;protein_id=MCE2618579.1;transl_table=11 JAJSBG010000012.1 Genbank gene 6951 9104 . + . ID=gene-LVR01_04745;Name=comA;gbkey=Gene;gene=comA;gene_biotype=protein_coding;locus_tag=LVR01_04745 JAJSBG010000012.1 Protein Homology CDS 6951 9104 . + 0 ID=cds-MCE2618580.1;Parent=gene-LVR01_04745;Dbxref=NCBI_GP:MCE2618580.1;Name=MCE2618580.1;gbkey=CDS;gene=comA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000668284.1;locus_tag=LVR01_04745;product=peptide cleavage/export ABC transporter ComA;protein_id=MCE2618580.1;transl_table=11 JAJSBG010000012.1 Genbank gene 9117 10466 . + . ID=gene-LVR01_04750;Name=comB;gbkey=Gene;gene=comB;gene_biotype=protein_coding;locus_tag=LVR01_04750 JAJSBG010000012.1 Protein Homology CDS 9117 10466 . + 0 ID=cds-MCE2618581.1;Parent=gene-LVR01_04750;Dbxref=NCBI_GP:MCE2618581.1;Name=MCE2618581.1;gbkey=CDS;gene=comB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801614.1;locus_tag=LVR01_04750;product=competence pheromone export protein ComB;protein_id=MCE2618581.1;transl_table=11 JAJSBG010000012.1 Genbank gene 10636 11343 . + . ID=gene-LVR01_04755;Name=LVR01_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04755 JAJSBG010000012.1 Protein Homology CDS 10636 11343 . + 0 ID=cds-MCE2618582.1;Parent=gene-LVR01_04755;Dbxref=NCBI_GP:MCE2618582.1;Name=MCE2618582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002312208.1;locus_tag=LVR01_04755;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MCE2618582.1;transl_table=11 JAJSBG010000012.1 Genbank pseudogene 11420 11488 . + . ID=gene-LVR01_04760;Name=LVR01_04760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04760;pseudo=true JAJSBG010000012.1 Protein Homology CDS 11420 11488 . + 0 ID=cds-LVR01_04760;Parent=gene-LVR01_04760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002312208.1;locus_tag=LVR01_04760;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;pseudo=true;transl_table=11 JAJSBG010000012.1 Genbank gene 11545 15270 . + . ID=gene-LVR01_04765;Name=LVR01_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04765 JAJSBG010000012.1 Protein Homology CDS 11545 15270 . + 0 ID=cds-MCE2618583.1;Parent=gene-LVR01_04765;Dbxref=NCBI_GP:MCE2618583.1;Name=MCE2618583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361233.1;locus_tag=LVR01_04765;product=phosphoribosylformylglycinamidine synthase;protein_id=MCE2618583.1;transl_table=11 JAJSBG010000012.1 Genbank gene 15430 16872 . + . ID=gene-LVR01_04770;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LVR01_04770 JAJSBG010000012.1 Protein Homology CDS 15430 16872 . + 0 ID=cds-MCE2618584.1;Parent=gene-LVR01_04770;Dbxref=NCBI_GP:MCE2618584.1;Name=MCE2618584.1;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220605.1;locus_tag=LVR01_04770;product=amidophosphoribosyltransferase;protein_id=MCE2618584.1;transl_table=11 JAJSBG010000012.1 Genbank gene 17090 18112 . + . ID=gene-LVR01_04775;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LVR01_04775 JAJSBG010000012.1 Protein Homology CDS 17090 18112 . + 0 ID=cds-MCE2618585.1;Parent=gene-LVR01_04775;Dbxref=NCBI_GP:MCE2618585.1;Name=MCE2618585.1;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729529.1;locus_tag=LVR01_04775;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=MCE2618585.1;transl_table=11 JAJSBG010000012.1 Genbank gene 18109 18663 . + . ID=gene-LVR01_04780;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LVR01_04780 JAJSBG010000012.1 Protein Homology CDS 18109 18663 . + 0 ID=cds-MCE2618586.1;Parent=gene-LVR01_04780;Dbxref=NCBI_GP:MCE2618586.1;Name=MCE2618586.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717485.1;locus_tag=LVR01_04780;product=phosphoribosylglycinamide formyltransferase;protein_id=MCE2618586.1;transl_table=11 JAJSBG010000012.1 Genbank gene 18660 19040 . + . ID=gene-LVR01_04785;Name=LVR01_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04785 JAJSBG010000012.1 Protein Homology CDS 18660 19040 . + 0 ID=cds-MCE2618587.1;Parent=gene-LVR01_04785;Dbxref=NCBI_GP:MCE2618587.1;Name=MCE2618587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218874.1;locus_tag=LVR01_04785;product=hypothetical protein;protein_id=MCE2618587.1;transl_table=11 JAJSBG010000012.1 Genbank gene 19077 19541 . + . ID=gene-LVR01_04790;Name=LVR01_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04790 JAJSBG010000012.1 Protein Homology CDS 19077 19541 . + 0 ID=cds-MCE2618588.1;Parent=gene-LVR01_04790;Dbxref=NCBI_GP:MCE2618588.1;Name=MCE2618588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660260.1;locus_tag=LVR01_04790;product=GNAT family N-acetyltransferase;protein_id=MCE2618588.1;transl_table=11 JAJSBG010000012.1 Genbank gene 19543 21090 . + . ID=gene-LVR01_04795;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LVR01_04795 JAJSBG010000012.1 Protein Homology CDS 19543 21090 . + 0 ID=cds-MCE2618589.1;Parent=gene-LVR01_04795;Dbxref=NCBI_GP:MCE2618589.1;Name=MCE2618589.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=LVR01_04795;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=MCE2618589.1;transl_table=11 JAJSBG010000012.1 Genbank gene 21212 22474 . + . ID=gene-LVR01_04800;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LVR01_04800 JAJSBG010000012.1 Protein Homology CDS 21212 22474 . + 0 ID=cds-MCE2618590.1;Parent=gene-LVR01_04800;Dbxref=NCBI_GP:MCE2618590.1;Name=MCE2618590.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772208.1;locus_tag=LVR01_04800;product=phosphoribosylamine--glycine ligase;protein_id=MCE2618590.1;transl_table=11 JAJSBG010000012.1 Genbank gene 22667 23158 . + . ID=gene-LVR01_04805;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LVR01_04805 JAJSBG010000012.1 Protein Homology CDS 22667 23158 . + 0 ID=cds-MCE2618591.1;Parent=gene-LVR01_04805;Dbxref=NCBI_GP:MCE2618591.1;Name=MCE2618591.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262541.1;locus_tag=LVR01_04805;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MCE2618591.1;transl_table=11 JAJSBG010000012.1 Genbank gene 23145 24236 . + . ID=gene-LVR01_04810;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=LVR01_04810 JAJSBG010000012.1 Protein Homology CDS 23145 24236 . + 0 ID=cds-MCE2618592.1;Parent=gene-LVR01_04810;Dbxref=NCBI_GP:MCE2618592.1;Name=MCE2618592.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099033.1;locus_tag=LVR01_04810;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=MCE2618592.1;transl_table=11 JAJSBG010000012.1 Genbank gene 24246 24473 . + . ID=gene-LVR01_04815;Name=LVR01_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04815 JAJSBG010000012.1 Protein Homology CDS 24246 24473 . + 0 ID=cds-MCE2618593.1;Parent=gene-LVR01_04815;Dbxref=NCBI_GP:MCE2618593.1;Name=MCE2618593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270103.1;locus_tag=LVR01_04815;product=phosphoribosylaminoimidazole carboxylase;protein_id=MCE2618593.1;transl_table=11 JAJSBG010000012.1 Genbank gene 24536 25834 . + . ID=gene-LVR01_04820;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LVR01_04820 JAJSBG010000012.1 Protein Homology CDS 24536 25834 . + 0 ID=cds-MCE2618594.1;Parent=gene-LVR01_04820;Dbxref=NCBI_GP:MCE2618594.1;Name=MCE2618594.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572899.1;locus_tag=LVR01_04820;product=adenylosuccinate lyase;protein_id=MCE2618594.1;transl_table=11 JAJSBG010000012.1 Genbank gene 25889 29842 . - . ID=gene-LVR01_04825;Name=strH;gbkey=Gene;gene=strH;gene_biotype=protein_coding;locus_tag=LVR01_04825 JAJSBG010000012.1 Protein Homology CDS 25889 29842 . - 0 ID=cds-MCE2618595.1;Parent=gene-LVR01_04825;Dbxref=NCBI_GP:MCE2618595.1;Name=MCE2618595.1;gbkey=CDS;gene=strH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679939.1;locus_tag=LVR01_04825;product=LPXTG-anchored beta-N-acetylhexosaminidase StrH;protein_id=MCE2618595.1;transl_table=11 JAJSBG010000012.1 Genbank gene 30157 30873 . - . ID=gene-LVR01_04830;Name=LVR01_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04830 JAJSBG010000012.1 Protein Homology CDS 30157 30873 . - 0 ID=cds-MCE2618596.1;Parent=gene-LVR01_04830;Dbxref=NCBI_GP:MCE2618596.1;Name=MCE2618596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007200.1;locus_tag=LVR01_04830;product=GntR family transcriptional regulator;protein_id=MCE2618596.1;transl_table=11 JAJSBG010000012.1 Genbank gene 31220 33007 . + . ID=gene-LVR01_04835;Name=LVR01_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04835 JAJSBG010000012.1 Protein Homology CDS 31220 33007 . + 0 ID=cds-MCE2618597.1;Parent=gene-LVR01_04835;Dbxref=NCBI_GP:MCE2618597.1;Name=MCE2618597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262529.1;locus_tag=LVR01_04835;product=beta-galactosidase;protein_id=MCE2618597.1;transl_table=11 JAJSBG010000012.1 Genbank gene 33004 33480 . + . ID=gene-LVR01_04840;Name=LVR01_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04840 JAJSBG010000012.1 Protein Homology CDS 33004 33480 . + 0 ID=cds-MCE2618598.1;Parent=gene-LVR01_04840;Dbxref=NCBI_GP:MCE2618598.1;Name=MCE2618598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155184.1;locus_tag=LVR01_04840;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=MCE2618598.1;transl_table=11 JAJSBG010000012.1 Genbank gene 33508 34413 . + . ID=gene-LVR01_04845;Name=LVR01_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04845 JAJSBG010000012.1 Protein Homology CDS 33508 34413 . + 0 ID=cds-MCE2618599.1;Parent=gene-LVR01_04845;Dbxref=NCBI_GP:MCE2618599.1;Name=MCE2618599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149155.1;locus_tag=LVR01_04845;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=MCE2618599.1;transl_table=11 JAJSBG010000012.1 Genbank gene 34400 35215 . + . ID=gene-LVR01_04850;Name=LVR01_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04850 JAJSBG010000012.1 Protein Homology CDS 34400 35215 . + 0 ID=cds-MCE2618600.1;Parent=gene-LVR01_04850;Dbxref=NCBI_GP:MCE2618600.1;Name=MCE2618600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185291.1;locus_tag=LVR01_04850;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MCE2618600.1;transl_table=11 JAJSBG010000012.1 Genbank gene 35222 35626 . + . ID=gene-LVR01_04855;Name=LVR01_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04855 JAJSBG010000012.1 Protein Homology CDS 35222 35626 . + 0 ID=cds-MCE2618601.1;Parent=gene-LVR01_04855;Dbxref=NCBI_GP:MCE2618601.1;Name=MCE2618601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284837.1;locus_tag=LVR01_04855;product=PTS sugar transporter subunit IIA;protein_id=MCE2618601.1;transl_table=11 JAJSBG010000012.1 Genbank gene 36063 37229 . + . ID=gene-LVR01_04860;Name=LVR01_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04860 JAJSBG010000012.1 Protein Homology CDS 36063 37229 . + 0 ID=cds-MCE2618602.1;Parent=gene-LVR01_04860;Dbxref=NCBI_GP:MCE2618602.1;Name=MCE2618602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257942.1;locus_tag=LVR01_04860;product=SIS domain-containing protein;protein_id=MCE2618602.1;transl_table=11 JAJSBG010000012.1 Genbank gene 37345 38382 . + . ID=gene-LVR01_04865;Name=LVR01_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04865 JAJSBG010000012.1 Protein Homology CDS 37345 38382 . + 0 ID=cds-MCE2618603.1;Parent=gene-LVR01_04865;Dbxref=NCBI_GP:MCE2618603.1;Name=MCE2618603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649444.1;locus_tag=LVR01_04865;product=galactose mutarotase;protein_id=MCE2618603.1;transl_table=11 JAJSBG010000012.1 Genbank gene 38589 39443 . + . ID=gene-LVR01_04870;Name=LVR01_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04870 JAJSBG010000012.1 Protein Homology CDS 38589 39443 . + 0 ID=cds-MCE2618604.1;Parent=gene-LVR01_04870;Dbxref=NCBI_GP:MCE2618604.1;Name=MCE2618604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220702.1;locus_tag=LVR01_04870;product=VOC family protein;protein_id=MCE2618604.1;transl_table=11 JAJSBG010000012.1 Genbank gene 39584 40348 . + . ID=gene-LVR01_04875;Name=LVR01_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04875 JAJSBG010000012.1 Protein Homology CDS 39584 40348 . + 0 ID=cds-MCE2618605.1;Parent=gene-LVR01_04875;Dbxref=NCBI_GP:MCE2618605.1;Name=MCE2618605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862814.1;locus_tag=LVR01_04875;product=nucleoside phosphorylase;protein_id=MCE2618605.1;transl_table=11 JAJSBG010000012.1 Genbank gene 40562 41941 . + . ID=gene-LVR01_04880;Name=LVR01_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04880 JAJSBG010000012.1 Protein Homology CDS 40562 41941 . + 0 ID=cds-MCE2618606.1;Parent=gene-LVR01_04880;Dbxref=NCBI_GP:MCE2618606.1;Name=MCE2618606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000897732.1;locus_tag=LVR01_04880;product=TrkH family potassium uptake protein;protein_id=MCE2618606.1;transl_table=11 JAJSBG010000012.1 Genbank gene 41955 42620 . + . ID=gene-LVR01_04885;Name=LVR01_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04885 JAJSBG010000012.1 Protein Homology CDS 41955 42620 . + 0 ID=cds-MCE2618607.1;Parent=gene-LVR01_04885;Dbxref=NCBI_GP:MCE2618607.1;Name=MCE2618607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283900.1;locus_tag=LVR01_04885;product=TrkA family potassium uptake protein;protein_id=MCE2618607.1;transl_table=11 JAJSBG010000012.1 Genbank gene 42767 42937 . - . ID=gene-LVR01_04890;Name=LVR01_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04890 JAJSBG010000012.1 Protein Homology CDS 42767 42937 . - 0 ID=cds-MCE2618608.1;Parent=gene-LVR01_04890;Dbxref=NCBI_GP:MCE2618608.1;Name=MCE2618608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_04890;product=hypothetical protein;protein_id=MCE2618608.1;transl_table=11 JAJSBG010000012.1 Genbank gene 42974 43990 . + . ID=gene-LVR01_04895;Name=LVR01_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04895 JAJSBG010000012.1 Protein Homology CDS 42974 43990 . + 0 ID=cds-MCE2618609.1;Parent=gene-LVR01_04895;Dbxref=NCBI_GP:MCE2618609.1;Name=MCE2618609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000771883.1;locus_tag=LVR01_04895;product=glycosyltransferase family 2 protein;protein_id=MCE2618609.1;transl_table=11 JAJSBG010000012.1 Genbank gene 44106 45375 . + . ID=gene-LVR01_04900;Name=LVR01_04900;end_range=45375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04900;partial=true JAJSBG010000012.1 Protein Homology CDS 44106 45375 . + 0 ID=cds-MCE2618610.1;Parent=gene-LVR01_04900;Dbxref=NCBI_GP:MCE2618610.1;Name=MCE2618610.1;end_range=45375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671383.1;locus_tag=LVR01_04900;partial=true;product=PavB family fibronectin-binding SSURE repeat adhesin;protein_id=MCE2618610.1;transl_table=11 JAJSBG010000012.1 Genbank gene 45476 46329 . + . ID=gene-LVR01_04905;Name=LVR01_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04905;partial=true;start_range=.,45476 JAJSBG010000012.1 Protein Homology CDS 45476 46329 . + 2 ID=cds-MCE2618611.1;Parent=gene-LVR01_04905;Dbxref=NCBI_GP:MCE2618611.1;Name=MCE2618611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671355.1;locus_tag=LVR01_04905;partial=true;product=fibronectin-binding SSURE repeat-containing protein;protein_id=MCE2618611.1;start_range=.,45476;transl_table=11 JAJSBG010000012.1 Genbank gene 46496 47194 . + . ID=gene-LVR01_04910;Name=LVR01_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04910 JAJSBG010000012.1 Protein Homology CDS 46496 47194 . + 0 ID=cds-MCE2618612.1;Parent=gene-LVR01_04910;Dbxref=NCBI_GP:MCE2618612.1;Name=MCE2618612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520636.1;locus_tag=LVR01_04910;product=response regulator transcription factor;protein_id=MCE2618612.1;transl_table=11 JAJSBG010000012.1 Genbank gene 47191 48243 . + . ID=gene-LVR01_04915;Name=LVR01_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04915 JAJSBG010000012.1 Protein Homology CDS 47191 48243 . + 0 ID=cds-MCE2618613.1;Parent=gene-LVR01_04915;Dbxref=NCBI_GP:MCE2618613.1;Name=MCE2618613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769768.1;locus_tag=LVR01_04915;product=HAMP domain-containing histidine kinase;protein_id=MCE2618613.1;transl_table=11 JAJSBG010000012.1 Genbank gene 48438 49049 . + . ID=gene-LVR01_04920;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LVR01_04920 JAJSBG010000012.1 Protein Homology CDS 48438 49049 . + 0 ID=cds-MCE2618614.1;Parent=gene-LVR01_04920;Dbxref=NCBI_GP:MCE2618614.1;Name=MCE2618614.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=LVR01_04920;product=30S ribosomal protein S4;protein_id=MCE2618614.1;transl_table=11 JAJSBG010000012.1 Genbank gene 49212 49499 . + . ID=gene-LVR01_04925;Name=LVR01_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04925 JAJSBG010000012.1 Protein Homology CDS 49212 49499 . + 0 ID=cds-MCE2618615.1;Parent=gene-LVR01_04925;Dbxref=NCBI_GP:MCE2618615.1;Name=MCE2618615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000543070.1;locus_tag=LVR01_04925;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MCE2618615.1;transl_table=11 JAJSBG010000012.1 Genbank gene 49489 49836 . + . ID=gene-LVR01_04930;Name=LVR01_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04930 JAJSBG010000012.1 Protein Homology CDS 49489 49836 . + 0 ID=cds-MCE2618616.1;Parent=gene-LVR01_04930;Dbxref=NCBI_GP:MCE2618616.1;Name=MCE2618616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253103.1;locus_tag=LVR01_04930;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCE2618616.1;transl_table=11 JAJSBG010000012.1 Genbank pseudogene 49925 50136 . + . ID=gene-LVR01_04935;Name=LVR01_04935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_04935;pseudo=true JAJSBG010000012.1 Protein Homology CDS 49925 50136 . + 0 ID=cds-LVR01_04935;Parent=gene-LVR01_04935;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1;locus_tag=LVR01_04935;product=IS3 family transposase;pseudo=true;transl_table=11 JAJSBG010000012.1 Genbank gene 50261 51115 . - . ID=gene-LVR01_04940;Name=LVR01_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04940 JAJSBG010000012.1 Protein Homology CDS 50261 51115 . - 0 ID=cds-MCE2618617.1;Parent=gene-LVR01_04940;Dbxref=NCBI_GP:MCE2618617.1;Name=MCE2618617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=LVR01_04940;product=helix-turn-helix domain-containing protein;protein_id=MCE2618617.1;transl_table=11 JAJSBG010000012.1 Genbank gene 51208 52446 . + . ID=gene-LVR01_04945;Name=LVR01_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04945 JAJSBG010000012.1 Protein Homology CDS 51208 52446 . + 0 ID=cds-MCE2618618.1;Parent=gene-LVR01_04945;Dbxref=NCBI_GP:MCE2618618.1;Name=MCE2618618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722392.1;locus_tag=LVR01_04945;product=caspase family protein;protein_id=MCE2618618.1;transl_table=11 JAJSBG010000012.1 Genbank gene 52459 53541 . + . ID=gene-LVR01_04950;Name=LVR01_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04950 JAJSBG010000012.1 Protein Homology CDS 52459 53541 . + 0 ID=cds-MCE2618619.1;Parent=gene-LVR01_04950;Dbxref=NCBI_GP:MCE2618619.1;Name=MCE2618619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868696.1;locus_tag=LVR01_04950;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2618619.1;transl_table=11 ##sequence-region JAJSBG010000130.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000130.1 Genbank region 1 272 . + . ID=JAJSBG010000130.1:1..272;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000130.1 Genbank pseudogene 178 272 . - . ID=gene-LVR01_11445;Name=LVR01_11445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11445;pseudo=true JAJSBG010000130.1 Protein Homology CDS 178 272 . - 2 ID=cds-LVR01_11445;Parent=gene-LVR01_11445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897432.1;locus_tag=LVR01_11445;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000131.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000131.1 Genbank region 1 265 . + . ID=JAJSBG010000131.1:1..265;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000131.1 Genbank pseudogene 1 213 . + . ID=gene-LVR01_11450;Name=LVR01_11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11450;pseudo=true JAJSBG010000131.1 Protein Homology CDS 1 213 . + 0 ID=cds-LVR01_11450;Parent=gene-LVR01_11450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010921814.1;locus_tag=LVR01_11450;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000132.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000132.1 Genbank region 1 256 . + . ID=JAJSBG010000132.1:1..256;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000132.1 Genbank gene 1 256 . - . ID=gene-LVR01_11455;Name=LVR01_11455;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11455;partial=true;start_range=.,1 JAJSBG010000132.1 Protein Homology CDS 1 256 . - 0 ID=cds-MCE2619749.1;Parent=gene-LVR01_11455;Dbxref=NCBI_GP:MCE2619749.1;Name=MCE2619749.1;end_range=256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=LVR01_11455;partial=true;product=ISNCY family transposase;protein_id=MCE2619749.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000133.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000133.1 Genbank region 1 245 . + . ID=JAJSBG010000133.1:1..245;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000133.1 Genbank gene 1 245 . + . ID=gene-LVR01_11460;Name=LVR01_11460;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11460;partial=true;start_range=.,1 JAJSBG010000133.1 Protein Homology CDS 1 245 . + 0 ID=cds-MCE2619750.1;Parent=gene-LVR01_11460;Dbxref=NCBI_GP:MCE2619750.1;Name=MCE2619750.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671383.1;locus_tag=LVR01_11460;partial=true;product=fibronectin-binding SSURE repeat-containing protein;protein_id=MCE2619750.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000134.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000134.1 Genbank region 1 231 . + . ID=JAJSBG010000134.1:1..231;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000134.1 Genbank gene 1 231 . + . ID=gene-LVR01_11465;Name=LVR01_11465;end_range=231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11465;partial=true;start_range=.,1 JAJSBG010000134.1 Protein Homology CDS 1 231 . + 2 ID=cds-MCE2619751.1;Parent=gene-LVR01_11465;Dbxref=NCBI_GP:MCE2619751.1;Name=MCE2619751.1;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558115.1;locus_tag=LVR01_11465;partial=true;product=hypothetical protein;protein_id=MCE2619751.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000135.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000135.1 Genbank region 1 229 . + . ID=JAJSBG010000135.1:1..229;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000135.1 Genbank gene 1 229 . - . ID=gene-LVR01_11470;Name=LVR01_11470;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11470;partial=true;start_range=.,1 JAJSBG010000135.1 Protein Homology CDS 1 229 . - 1 ID=cds-MCE2619752.1;Parent=gene-LVR01_11470;Dbxref=NCBI_GP:MCE2619752.1;Name=MCE2619752.1;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152639374.1;locus_tag=LVR01_11470;partial=true;product=IS630 family transposase;protein_id=MCE2619752.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000136.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000136.1 Genbank region 1 227 . + . ID=JAJSBG010000136.1:1..227;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000136.1 Genbank gene 1 227 . - . ID=gene-LVR01_11475;Name=LVR01_11475;end_range=227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11475;partial=true;start_range=.,1 JAJSBG010000136.1 Protein Homology CDS 1 227 . - 0 ID=cds-MCE2619753.1;Parent=gene-LVR01_11475;Dbxref=NCBI_GP:MCE2619753.1;Name=MCE2619753.1;end_range=227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010921814.1;locus_tag=LVR01_11475;partial=true;product=IS66 family transposase zinc-finger binding domain-containing protein;protein_id=MCE2619753.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000137.1 1 221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000137.1 Genbank region 1 221 . + . ID=JAJSBG010000137.1:1..221;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000137.1 Genbank pseudogene 62 221 . + . ID=gene-LVR01_11480;Name=LVR01_11480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11480;pseudo=true JAJSBG010000137.1 Protein Homology CDS 62 221 . + 0 ID=cds-LVR01_11480;Parent=gene-LVR01_11480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_068988785.1;locus_tag=LVR01_11480;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000138.1 1 215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000138.1 Genbank region 1 215 . + . ID=JAJSBG010000138.1:1..215;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM ##sequence-region JAJSBG010000013.1 1 52079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000013.1 Genbank region 1 52079 . + . ID=JAJSBG010000013.1:1..52079;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000013.1 Genbank gene 224 355 . + . ID=gene-LVR01_04955;Name=LVR01_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04955 JAJSBG010000013.1 Protein Homology CDS 224 355 . + 0 ID=cds-MCE2618620.1;Parent=gene-LVR01_04955;Dbxref=NCBI_GP:MCE2618620.1;Name=MCE2618620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813667.1;locus_tag=LVR01_04955;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=MCE2618620.1;transl_table=11 JAJSBG010000013.1 Genbank gene 376 1926 . + . ID=gene-LVR01_04960;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=LVR01_04960 JAJSBG010000013.1 Protein Homology CDS 376 1926 . + 0 ID=cds-MCE2618621.1;Parent=gene-LVR01_04960;Dbxref=NCBI_GP:MCE2618621.1;Name=MCE2618621.1;gbkey=CDS;gene=dltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012972622.1;locus_tag=LVR01_04960;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=MCE2618621.1;transl_table=11 JAJSBG010000013.1 Genbank gene 1923 3167 . + . ID=gene-LVR01_04965;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=LVR01_04965 JAJSBG010000013.1 Protein Homology CDS 1923 3167 . + 0 ID=cds-MCE2618622.1;Parent=gene-LVR01_04965;Dbxref=NCBI_GP:MCE2618622.1;Name=MCE2618622.1;gbkey=CDS;gene=dltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969717.1;locus_tag=LVR01_04965;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=MCE2618622.1;transl_table=11 JAJSBG010000013.1 Genbank gene 3181 3420 . + . ID=gene-LVR01_04970;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=LVR01_04970 JAJSBG010000013.1 Protein Homology CDS 3181 3420 . + 0 ID=cds-MCE2618623.1;Parent=gene-LVR01_04970;Dbxref=NCBI_GP:MCE2618623.1;Name=MCE2618623.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591431.1;locus_tag=LVR01_04970;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=MCE2618623.1;transl_table=11 JAJSBG010000013.1 Genbank gene 3413 4681 . + . ID=gene-LVR01_04975;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=LVR01_04975 JAJSBG010000013.1 Protein Homology CDS 3413 4681 . + 0 ID=cds-MCE2618624.1;Parent=gene-LVR01_04975;Dbxref=NCBI_GP:MCE2618624.1;Name=MCE2618624.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919885.1;locus_tag=LVR01_04975;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=MCE2618624.1;transl_table=11 JAJSBG010000013.1 Genbank gene 4833 5273 . + . ID=gene-LVR01_04980;Name=adcR;gbkey=Gene;gene=adcR;gene_biotype=protein_coding;locus_tag=LVR01_04980 JAJSBG010000013.1 Protein Homology CDS 4833 5273 . + 0 ID=cds-MCE2618625.1;Parent=gene-LVR01_04980;Dbxref=NCBI_GP:MCE2618625.1;Name=MCE2618625.1;gbkey=CDS;gene=adcR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001249319.1;locus_tag=LVR01_04980;product=zinc-dependent transcriptional regulator AdcR;protein_id=MCE2618625.1;transl_table=11 JAJSBG010000013.1 Genbank gene 5273 5977 . + . ID=gene-LVR01_04985;Name=LVR01_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04985 JAJSBG010000013.1 Protein Homology CDS 5273 5977 . + 0 ID=cds-MCE2618626.1;Parent=gene-LVR01_04985;Dbxref=NCBI_GP:MCE2618626.1;Name=MCE2618626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269494.1;locus_tag=LVR01_04985;product=metal ABC transporter ATP-binding protein;protein_id=MCE2618626.1;transl_table=11 JAJSBG010000013.1 Genbank gene 5970 6776 . + . ID=gene-LVR01_04990;Name=LVR01_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04990 JAJSBG010000013.1 Protein Homology CDS 5970 6776 . + 0 ID=cds-MCE2618627.1;Parent=gene-LVR01_04990;Dbxref=NCBI_GP:MCE2618627.1;Name=MCE2618627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398342.1;locus_tag=LVR01_04990;product=metal ABC transporter permease;protein_id=MCE2618627.1;transl_table=11 JAJSBG010000013.1 Genbank gene 6786 8291 . + . ID=gene-LVR01_04995;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=LVR01_04995 JAJSBG010000013.1 Protein Homology CDS 6786 8291 . + 0 ID=cds-MCE2618628.1;Parent=gene-LVR01_04995;Dbxref=NCBI_GP:MCE2618628.1;Name=MCE2618628.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724057.1;locus_tag=LVR01_04995;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=MCE2618628.1;transl_table=11 JAJSBG010000013.1 Genbank gene 9217 10182 . + . ID=gene-LVR01_05000;Name=LVR01_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05000 JAJSBG010000013.1 Protein Homology CDS 9217 10182 . + 0 ID=cds-MCE2618629.1;Parent=gene-LVR01_05000;Dbxref=NCBI_GP:MCE2618629.1;Name=MCE2618629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429453.1;locus_tag=LVR01_05000;product=DUF3644 domain-containing protein;protein_id=MCE2618629.1;transl_table=11 JAJSBG010000013.1 Genbank gene 11267 12124 . - . ID=gene-LVR01_05005;Name=LVR01_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05005 JAJSBG010000013.1 Protein Homology CDS 11267 12124 . - 0 ID=cds-MCE2618630.1;Parent=gene-LVR01_05005;Dbxref=NCBI_GP:MCE2618630.1;Name=MCE2618630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520758.1;locus_tag=LVR01_05005;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=MCE2618630.1;transl_table=11 JAJSBG010000013.1 Genbank gene 12381 13265 . + . ID=gene-LVR01_05010;Name=LVR01_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05010 JAJSBG010000013.1 Protein Homology CDS 12381 13265 . + 0 ID=cds-MCE2618631.1;Parent=gene-LVR01_05010;Dbxref=NCBI_GP:MCE2618631.1;Name=MCE2618631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838996.1;locus_tag=LVR01_05010;product=SPFH domain-containing protein;protein_id=MCE2618631.1;transl_table=11 JAJSBG010000013.1 Genbank gene 13349 13540 . + . ID=gene-LVR01_05015;Name=LVR01_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05015 JAJSBG010000013.1 GeneMarkS-2+ CDS 13349 13540 . + 0 ID=cds-MCE2618632.1;Parent=gene-LVR01_05015;Dbxref=NCBI_GP:MCE2618632.1;Name=MCE2618632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05015;product=chlorohydrolase;protein_id=MCE2618632.1;transl_table=11 JAJSBG010000013.1 Genbank gene 13665 19541 . + . ID=gene-LVR01_05020;Name=LVR01_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05020 JAJSBG010000013.1 Protein Homology CDS 13665 19541 . + 0 ID=cds-MCE2618633.1;Parent=gene-LVR01_05020;Dbxref=NCBI_GP:MCE2618633.1;Name=MCE2618633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017374.1;locus_tag=LVR01_05020;product=G5 domain-containing protein;protein_id=MCE2618633.1;transl_table=11 JAJSBG010000013.1 Genbank gene 19779 23567 . + . ID=gene-LVR01_05025;Name=LVR01_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05025 JAJSBG010000013.1 Protein Homology CDS 19779 23567 . + 0 ID=cds-MCE2618634.1;Parent=gene-LVR01_05025;Dbxref=NCBI_GP:MCE2618634.1;Name=MCE2618634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250572.1;locus_tag=LVR01_05025;product=DUF4982 domain-containing protein;protein_id=MCE2618634.1;transl_table=11 JAJSBG010000013.1 Genbank gene 23569 25257 . + . ID=gene-LVR01_05030;Name=LVR01_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05030 JAJSBG010000013.1 Protein Homology CDS 23569 25257 . + 0 ID=cds-MCE2618635.1;Parent=gene-LVR01_05030;Dbxref=NCBI_GP:MCE2618635.1;Name=MCE2618635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251210.1;locus_tag=LVR01_05030;product=alpha-L-fucosidase;protein_id=MCE2618635.1;transl_table=11 JAJSBG010000013.1 Genbank gene 25358 26392 . + . ID=gene-LVR01_05035;Name=LVR01_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05035 JAJSBG010000013.1 Protein Homology CDS 25358 26392 . + 0 ID=cds-MCE2618636.1;Parent=gene-LVR01_05035;Dbxref=NCBI_GP:MCE2618636.1;Name=MCE2618636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=LVR01_05035;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCE2618636.1;transl_table=11 JAJSBG010000013.1 Genbank pseudogene 26672 27139 . + . ID=gene-LVR01_05040;Name=LVR01_05040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05040;pseudo=true JAJSBG010000013.1 Protein Homology CDS 26672 27139 . + 0 ID=cds-LVR01_05040;Parent=gene-LVR01_05040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002875013.1;locus_tag=LVR01_05040;product=adenylosuccinate lyase;pseudo=true;transl_table=11 JAJSBG010000013.1 Genbank pseudogene 27354 27676 . - . ID=gene-LVR01_05045;Name=LVR01_05045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05045;pseudo=true JAJSBG010000013.1 Protein Homology CDS 27354 27676 . - 0 ID=cds-LVR01_05045;Parent=gene-LVR01_05045;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_05045;product=IS630 transposase-related protein;pseudo=true;transl_table=11 JAJSBG010000013.1 Genbank gene 28289 31990 . + . ID=gene-LVR01_05050;Name=LVR01_05050;end_range=31990,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05050;partial=true JAJSBG010000013.1 Protein Homology CDS 28289 31990 . + 0 ID=cds-MCE2618637.1;Parent=gene-LVR01_05050;Dbxref=NCBI_GP:MCE2618637.1;Name=MCE2618637.1;end_range=31990,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LVR01_05050;partial=true;product=DUF1542 domain-containing protein;protein_id=MCE2618637.1;transl_table=11 JAJSBG010000013.1 Genbank gene 32091 35054 . + . ID=gene-LVR01_05055;Name=LVR01_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05055;partial=true;start_range=.,32091 JAJSBG010000013.1 Protein Homology CDS 32091 35054 . + 0 ID=cds-MCE2618638.1;Parent=gene-LVR01_05055;Dbxref=NCBI_GP:MCE2618638.1;Name=MCE2618638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LVR01_05055;partial=true;product=DUF1542 domain-containing protein;protein_id=MCE2618638.1;start_range=.,32091;transl_table=11 JAJSBG010000013.1 Genbank gene 35167 37263 . - . ID=gene-LVR01_05060;Name=LVR01_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05060 JAJSBG010000013.1 Protein Homology CDS 35167 37263 . - 0 ID=cds-MCE2618639.1;Parent=gene-LVR01_05060;Dbxref=NCBI_GP:MCE2618639.1;Name=MCE2618639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399394.1;locus_tag=LVR01_05060;product=GH92 family glycosyl hydrolase;protein_id=MCE2618639.1;transl_table=11 JAJSBG010000013.1 Genbank gene 37434 38714 . + . ID=gene-LVR01_05065;Name=LVR01_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05065 JAJSBG010000013.1 Protein Homology CDS 37434 38714 . + 0 ID=cds-MCE2618640.1;Parent=gene-LVR01_05065;Dbxref=NCBI_GP:MCE2618640.1;Name=MCE2618640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844830.1;locus_tag=LVR01_05065;product=glycoside hydrolase family 125 protein;protein_id=MCE2618640.1;transl_table=11 JAJSBG010000013.1 Genbank gene 38813 41458 . + . ID=gene-LVR01_05070;Name=LVR01_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05070 JAJSBG010000013.1 Protein Homology CDS 38813 41458 . + 0 ID=cds-MCE2618641.1;Parent=gene-LVR01_05070;Dbxref=NCBI_GP:MCE2618641.1;Name=MCE2618641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432759.1;locus_tag=LVR01_05070;product=alpha-mannosidase;protein_id=MCE2618641.1;transl_table=11 JAJSBG010000013.1 Genbank gene 41542 42411 . + . ID=gene-LVR01_05075;Name=LVR01_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05075 JAJSBG010000013.1 Protein Homology CDS 41542 42411 . + 0 ID=cds-MCE2618642.1;Parent=gene-LVR01_05075;Dbxref=NCBI_GP:MCE2618642.1;Name=MCE2618642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399399.1;locus_tag=LVR01_05075;product=ROK family protein;protein_id=MCE2618642.1;transl_table=11 JAJSBG010000013.1 Genbank gene 42405 44285 . + . ID=gene-LVR01_05080;Name=LVR01_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05080 JAJSBG010000013.1 Protein Homology CDS 42405 44285 . + 0 ID=cds-MCE2618643.1;Parent=gene-LVR01_05080;Dbxref=NCBI_GP:MCE2618643.1;Name=MCE2618643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397342.1;locus_tag=LVR01_05080;product=beta-N-acetylhexosaminidase;protein_id=MCE2618643.1;transl_table=11 JAJSBG010000013.1 Genbank gene 44585 44911 . + . ID=gene-LVR01_05085;Name=LVR01_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05085 JAJSBG010000013.1 Protein Homology CDS 44585 44911 . + 0 ID=cds-MCE2618644.1;Parent=gene-LVR01_05085;Dbxref=NCBI_GP:MCE2618644.1;Name=MCE2618644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604884.1;locus_tag=LVR01_05085;product=plasmid pRiA4b ORF-3 family protein;protein_id=MCE2618644.1;transl_table=11 JAJSBG010000013.1 Genbank gene 45580 46095 . + . ID=gene-LVR01_05090;Name=LVR01_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05090 JAJSBG010000013.1 Protein Homology CDS 45580 46095 . + 0 ID=cds-MCE2618645.1;Parent=gene-LVR01_05090;Dbxref=NCBI_GP:MCE2618645.1;Name=MCE2618645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837197.1;locus_tag=LVR01_05090;product=hypothetical protein;protein_id=MCE2618645.1;transl_table=11 JAJSBG010000013.1 Genbank gene 46437 47024 . + . ID=gene-LVR01_05095;Name=LVR01_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05095 JAJSBG010000013.1 Protein Homology CDS 46437 47024 . + 0 ID=cds-MCE2618646.1;Parent=gene-LVR01_05095;Dbxref=NCBI_GP:MCE2618646.1;Name=MCE2618646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002986.1;locus_tag=LVR01_05095;product=hypothetical protein;protein_id=MCE2618646.1;transl_table=11 JAJSBG010000013.1 Genbank gene 47039 47383 . + . ID=gene-LVR01_05100;Name=LVR01_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05100 JAJSBG010000013.1 Protein Homology CDS 47039 47383 . + 0 ID=cds-MCE2618647.1;Parent=gene-LVR01_05100;Dbxref=NCBI_GP:MCE2618647.1;Name=MCE2618647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002962.1;locus_tag=LVR01_05100;product=hypothetical protein;protein_id=MCE2618647.1;transl_table=11 JAJSBG010000013.1 Genbank gene 47383 47817 . + . ID=gene-LVR01_05105;Name=LVR01_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05105 JAJSBG010000013.1 Protein Homology CDS 47383 47817 . + 0 ID=cds-MCE2618648.1;Parent=gene-LVR01_05105;Dbxref=NCBI_GP:MCE2618648.1;Name=MCE2618648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096818.1;locus_tag=LVR01_05105;product=protein-export chaperone SecB;protein_id=MCE2618648.1;transl_table=11 JAJSBG010000013.1 Genbank gene 48381 51314 . + . ID=gene-LVR01_05110;Name=LVR01_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05110 JAJSBG010000013.1 Protein Homology CDS 48381 51314 . + 0 ID=cds-MCE2618649.1;Parent=gene-LVR01_05110;Dbxref=NCBI_GP:MCE2618649.1;Name=MCE2618649.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=LVR01_05110;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2618649.1;transl_table=11 JAJSBG010000013.1 Genbank gene 51601 51951 . + . ID=gene-LVR01_05115;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LVR01_05115 JAJSBG010000013.1 Protein Homology CDS 51601 51951 . + 0 ID=cds-MCE2618650.1;Parent=gene-LVR01_05115;Dbxref=NCBI_GP:MCE2618650.1;Name=MCE2618650.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=LVR01_05115;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MCE2618650.1;transl_table=11 ##sequence-region JAJSBG010000014.1 1 49687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000014.1 Genbank region 1 49687 . + . ID=JAJSBG010000014.1:1..49687;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000014.1 Genbank gene 1 104 . + . ID=gene-LVR01_05120;Name=LVR01_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05120;partial=true;start_range=.,1 JAJSBG010000014.1 Protein Homology CDS 1 104 . + 2 ID=cds-MCE2618651.1;Parent=gene-LVR01_05120;Dbxref=NCBI_GP:MCE2618651.1;Name=MCE2618651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405235.1;locus_tag=LVR01_05120;partial=true;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCE2618651.1;start_range=.,1;transl_table=11 JAJSBG010000014.1 Genbank gene 310 489 . - . ID=gene-LVR01_05125;Name=LVR01_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05125 JAJSBG010000014.1 Protein Homology CDS 310 489 . - 0 ID=cds-MCE2618652.1;Parent=gene-LVR01_05125;Dbxref=NCBI_GP:MCE2618652.1;Name=MCE2618652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209433.1;locus_tag=LVR01_05125;product=hypothetical protein;protein_id=MCE2618652.1;transl_table=11 JAJSBG010000014.1 Genbank gene 631 780 . - . ID=gene-LVR01_05130;Name=LVR01_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05130 JAJSBG010000014.1 GeneMarkS-2+ CDS 631 780 . - 0 ID=cds-MCE2618653.1;Parent=gene-LVR01_05130;Dbxref=NCBI_GP:MCE2618653.1;Name=MCE2618653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05130;product=hypothetical protein;protein_id=MCE2618653.1;transl_table=11 JAJSBG010000014.1 Genbank gene 1049 2017 . - . ID=gene-LVR01_05135;Name=LVR01_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05135 JAJSBG010000014.1 Protein Homology CDS 1049 2017 . - 0 ID=cds-MCE2618654.1;Parent=gene-LVR01_05135;Dbxref=NCBI_GP:MCE2618654.1;Name=MCE2618654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081018.1;locus_tag=LVR01_05135;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCE2618654.1;transl_table=11 JAJSBG010000014.1 Genbank gene 2153 3010 . + . ID=gene-LVR01_05140;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=LVR01_05140 JAJSBG010000014.1 Protein Homology CDS 2153 3010 . + 0 ID=cds-MCE2618655.1;Parent=gene-LVR01_05140;Dbxref=NCBI_GP:MCE2618655.1;Name=MCE2618655.1;gbkey=CDS;gene=cdaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001867651.1;locus_tag=LVR01_05140;product=diadenylate cyclase CdaA;protein_id=MCE2618655.1;transl_table=11 JAJSBG010000014.1 Genbank gene 2997 3776 . + . ID=gene-LVR01_05145;Name=LVR01_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05145 JAJSBG010000014.1 Protein Homology CDS 2997 3776 . + 0 ID=cds-MCE2618656.1;Parent=gene-LVR01_05145;Dbxref=NCBI_GP:MCE2618656.1;Name=MCE2618656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397683.1;locus_tag=LVR01_05145;product=hypothetical protein;protein_id=MCE2618656.1;transl_table=11 JAJSBG010000014.1 Genbank gene 3801 5153 . + . ID=gene-LVR01_05150;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LVR01_05150 JAJSBG010000014.1 Protein Homology CDS 3801 5153 . + 0 ID=cds-MCE2618657.1;Parent=gene-LVR01_05150;Dbxref=NCBI_GP:MCE2618657.1;Name=MCE2618657.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517007.1;locus_tag=LVR01_05150;product=phosphoglucosamine mutase;protein_id=MCE2618657.1;transl_table=11 JAJSBG010000014.1 Genbank gene 5227 5601 . + . ID=gene-LVR01_05155;Name=LVR01_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05155 JAJSBG010000014.1 Protein Homology CDS 5227 5601 . + 0 ID=cds-MCE2618658.1;Parent=gene-LVR01_05155;Dbxref=NCBI_GP:MCE2618658.1;Name=MCE2618658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050081.1;locus_tag=LVR01_05155;product=DUF1149 family protein;protein_id=MCE2618658.1;transl_table=11 JAJSBG010000014.1 Genbank gene 5603 6451 . + . ID=gene-LVR01_05160;Name=LVR01_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05160 JAJSBG010000014.1 Protein Homology CDS 5603 6451 . + 0 ID=cds-MCE2618659.1;Parent=gene-LVR01_05160;Dbxref=NCBI_GP:MCE2618659.1;Name=MCE2618659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762171.1;locus_tag=LVR01_05160;product=DegV family protein;protein_id=MCE2618659.1;transl_table=11 JAJSBG010000014.1 Genbank gene 6728 7495 . + . ID=gene-LVR01_05165;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LVR01_05165 JAJSBG010000014.1 Protein Homology CDS 6728 7495 . + 0 ID=cds-MCE2618660.1;Parent=gene-LVR01_05165;Dbxref=NCBI_GP:MCE2618660.1;Name=MCE2618660.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897644.1;locus_tag=LVR01_05165;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=MCE2618660.1;transl_table=11 JAJSBG010000014.1 Genbank gene 7507 8691 . + . ID=gene-LVR01_05170;Name=LVR01_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05170 JAJSBG010000014.1 Protein Homology CDS 7507 8691 . + 0 ID=cds-MCE2618661.1;Parent=gene-LVR01_05170;Dbxref=NCBI_GP:MCE2618661.1;Name=MCE2618661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138849.1;locus_tag=LVR01_05170;product=CCA tRNA nucleotidyltransferase;protein_id=MCE2618661.1;transl_table=11 JAJSBG010000014.1 Genbank gene 8688 10559 . + . ID=gene-LVR01_05175;Name=LVR01_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05175 JAJSBG010000014.1 Protein Homology CDS 8688 10559 . + 0 ID=cds-MCE2618662.1;Parent=gene-LVR01_05175;Dbxref=NCBI_GP:MCE2618662.1;Name=MCE2618662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279112.1;locus_tag=LVR01_05175;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCE2618662.1;transl_table=11 JAJSBG010000014.1 Genbank gene 10596 11780 . - . ID=gene-LVR01_05180;Name=mntE;gbkey=Gene;gene=mntE;gene_biotype=protein_coding;locus_tag=LVR01_05180 JAJSBG010000014.1 Protein Homology CDS 10596 11780 . - 0 ID=cds-MCE2618663.1;Parent=gene-LVR01_05180;Dbxref=NCBI_GP:MCE2618663.1;Name=MCE2618663.1;gbkey=CDS;gene=mntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813920.1;locus_tag=LVR01_05180;product=CDF family manganese efflux transporter MntE;protein_id=MCE2618663.1;transl_table=11 JAJSBG010000014.1 Genbank gene 12088 14784 . + . ID=gene-LVR01_05185;Name=LVR01_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05185 JAJSBG010000014.1 Protein Homology CDS 12088 14784 . + 0 ID=cds-MCE2618664.1;Parent=gene-LVR01_05185;Dbxref=NCBI_GP:MCE2618664.1;Name=MCE2618664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032417.1;locus_tag=LVR01_05185;product=cation-translocating P-type ATPase;protein_id=MCE2618664.1;transl_table=11 JAJSBG010000014.1 Genbank gene 14797 15594 . + . ID=gene-LVR01_05190;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=LVR01_05190 JAJSBG010000014.1 Protein Homology CDS 14797 15594 . + 0 ID=cds-MCE2618665.1;Parent=gene-LVR01_05190;Dbxref=NCBI_GP:MCE2618665.1;Name=MCE2618665.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277412.1;locus_tag=LVR01_05190;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=MCE2618665.1;transl_table=11 JAJSBG010000014.1 Genbank gene 15855 16265 . + . ID=gene-LVR01_05195;Name=LVR01_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05195 JAJSBG010000014.1 Protein Homology CDS 15855 16265 . + 0 ID=cds-MCE2618666.1;Parent=gene-LVR01_05195;Dbxref=NCBI_GP:MCE2618666.1;Name=MCE2618666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000412213.1;locus_tag=LVR01_05195;product=peptide deformylase;protein_id=MCE2618666.1;transl_table=11 JAJSBG010000014.1 Genbank gene 16277 17872 . + . ID=gene-LVR01_05200;Name=LVR01_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05200 JAJSBG010000014.1 Protein Homology CDS 16277 17872 . + 0 ID=cds-MCE2618667.1;Parent=gene-LVR01_05200;Dbxref=NCBI_GP:MCE2618667.1;Name=MCE2618667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822862.1;locus_tag=LVR01_05200;product=hypothetical protein;protein_id=MCE2618667.1;transl_table=11 JAJSBG010000014.1 Genbank gene 18051 18215 . + . ID=gene-LVR01_05205;Name=LVR01_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05205 JAJSBG010000014.1 Protein Homology CDS 18051 18215 . + 0 ID=cds-MCE2618668.1;Parent=gene-LVR01_05205;Dbxref=NCBI_GP:MCE2618668.1;Name=MCE2618668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508323.1;locus_tag=LVR01_05205;product=YczI family protein;protein_id=MCE2618668.1;transl_table=11 JAJSBG010000014.1 Genbank gene 18399 19127 . + . ID=gene-LVR01_05210;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LVR01_05210 JAJSBG010000014.1 Protein Homology CDS 18399 19127 . + 0 ID=cds-MCE2618669.1;Parent=gene-LVR01_05210;Dbxref=NCBI_GP:MCE2618669.1;Name=MCE2618669.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697769.1;locus_tag=LVR01_05210;product=peroxide stress protein YaaA;protein_id=MCE2618669.1;transl_table=11 JAJSBG010000014.1 Genbank gene 19254 19802 . - . ID=gene-LVR01_05215;Name=LVR01_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05215 JAJSBG010000014.1 Protein Homology CDS 19254 19802 . - 0 ID=cds-MCE2618670.1;Parent=gene-LVR01_05215;Dbxref=NCBI_GP:MCE2618670.1;Name=MCE2618670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039625.1;locus_tag=LVR01_05215;product=NAD(P)H-dependent oxidoreductase;protein_id=MCE2618670.1;transl_table=11 JAJSBG010000014.1 Genbank gene 19940 20107 . + . ID=gene-LVR01_05220;Name=LVR01_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05220 JAJSBG010000014.1 GeneMarkS-2+ CDS 19940 20107 . + 0 ID=cds-MCE2618671.1;Parent=gene-LVR01_05220;Dbxref=NCBI_GP:MCE2618671.1;Name=MCE2618671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05220;product=hypothetical protein;protein_id=MCE2618671.1;transl_table=11 JAJSBG010000014.1 Genbank gene 20174 20662 . + . ID=gene-LVR01_05225;Name=LVR01_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05225 JAJSBG010000014.1 Protein Homology CDS 20174 20662 . + 0 ID=cds-MCE2618672.1;Parent=gene-LVR01_05225;Dbxref=NCBI_GP:MCE2618672.1;Name=MCE2618672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747178.1;locus_tag=LVR01_05225;product=DUF5590 domain-containing protein;protein_id=MCE2618672.1;transl_table=11 JAJSBG010000014.1 Genbank gene 20659 21846 . + . ID=gene-LVR01_05230;Name=LVR01_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05230 JAJSBG010000014.1 Protein Homology CDS 20659 21846 . + 0 ID=cds-MCE2618673.1;Parent=gene-LVR01_05230;Dbxref=NCBI_GP:MCE2618673.1;Name=MCE2618673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777780.1;locus_tag=LVR01_05230;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCE2618673.1;transl_table=11 JAJSBG010000014.1 Genbank gene 21839 22204 . + . ID=gene-LVR01_05235;Name=LVR01_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05235 JAJSBG010000014.1 Protein Homology CDS 21839 22204 . + 0 ID=cds-MCE2618674.1;Parent=gene-LVR01_05235;Dbxref=NCBI_GP:MCE2618674.1;Name=MCE2618674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863759.1;locus_tag=LVR01_05235;product=VOC family protein;protein_id=MCE2618674.1;transl_table=11 JAJSBG010000014.1 Genbank gene 22221 23567 . + . ID=gene-LVR01_05240;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LVR01_05240 JAJSBG010000014.1 Protein Homology CDS 22221 23567 . + 0 ID=cds-MCE2618675.1;Parent=gene-LVR01_05240;Dbxref=NCBI_GP:MCE2618675.1;Name=MCE2618675.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038477.1;locus_tag=LVR01_05240;product=asparagine--tRNA ligase;protein_id=MCE2618675.1;transl_table=11 JAJSBG010000014.1 Genbank gene 23720 24010 . + . ID=gene-LVR01_05245;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LVR01_05245 JAJSBG010000014.1 Protein Homology CDS 23720 24010 . + 0 ID=cds-MCE2618676.1;Parent=gene-LVR01_05245;Dbxref=NCBI_GP:MCE2618676.1;Name=MCE2618676.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030687.1;locus_tag=LVR01_05245;product=30S ribosomal protein S6;protein_id=MCE2618676.1;transl_table=11 JAJSBG010000014.1 Genbank gene 24022 24492 . + . ID=gene-LVR01_05250;Name=ssbA;gbkey=Gene;gene=ssbA;gene_biotype=protein_coding;locus_tag=LVR01_05250 JAJSBG010000014.1 Protein Homology CDS 24022 24492 . + 0 ID=cds-MCE2618677.1;Parent=gene-LVR01_05250;Dbxref=NCBI_GP:MCE2618677.1;Name=MCE2618677.1;gbkey=CDS;gene=ssbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083754.1;locus_tag=LVR01_05250;product=single-stranded DNA-binding protein SsbA;protein_id=MCE2618677.1;transl_table=11 JAJSBG010000014.1 Genbank gene 24524 24763 . + . ID=gene-LVR01_05255;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LVR01_05255 JAJSBG010000014.1 Protein Homology CDS 24524 24763 . + 0 ID=cds-MCE2618678.1;Parent=gene-LVR01_05255;Dbxref=NCBI_GP:MCE2618678.1;Name=MCE2618678.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=LVR01_05255;product=30S ribosomal protein S18;protein_id=MCE2618678.1;transl_table=11 JAJSBG010000014.1 Genbank gene 24987 25490 . + . ID=gene-LVR01_05260;Name=LVR01_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05260 JAJSBG010000014.1 Protein Homology CDS 24987 25490 . + 0 ID=cds-MCE2618679.1;Parent=gene-LVR01_05260;Dbxref=NCBI_GP:MCE2618679.1;Name=MCE2618679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152325.1;locus_tag=LVR01_05260;product=GNAT family N-acetyltransferase;protein_id=MCE2618679.1;transl_table=11 JAJSBG010000014.1 Genbank gene 25572 26972 . + . ID=gene-LVR01_05265;Name=LVR01_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05265 JAJSBG010000014.1 Protein Homology CDS 25572 26972 . + 0 ID=cds-MCE2618680.1;Parent=gene-LVR01_05265;Dbxref=NCBI_GP:MCE2618680.1;Name=MCE2618680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145273.1;locus_tag=LVR01_05265;product=bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase;protein_id=MCE2618680.1;transl_table=11 JAJSBG010000014.1 Genbank gene 26974 27333 . + . ID=gene-LVR01_05270;Name=LVR01_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05270 JAJSBG010000014.1 Protein Homology CDS 26974 27333 . + 0 ID=cds-MCE2618681.1;Parent=gene-LVR01_05270;Dbxref=NCBI_GP:MCE2618681.1;Name=MCE2618681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689596.1;locus_tag=LVR01_05270;product=S1 RNA-binding domain-containing protein;protein_id=MCE2618681.1;transl_table=11 JAJSBG010000014.1 Genbank gene 27387 28136 . + . ID=gene-LVR01_05275;Name=LVR01_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05275 JAJSBG010000014.1 Protein Homology CDS 27387 28136 . + 0 ID=cds-MCE2618682.1;Parent=gene-LVR01_05275;Dbxref=NCBI_GP:MCE2618682.1;Name=MCE2618682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390770.1;locus_tag=LVR01_05275;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=MCE2618682.1;transl_table=11 JAJSBG010000014.1 Genbank gene 28126 28422 . + . ID=gene-LVR01_05280;Name=LVR01_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05280 JAJSBG010000014.1 Protein Homology CDS 28126 28422 . + 0 ID=cds-MCE2618683.1;Parent=gene-LVR01_05280;Dbxref=NCBI_GP:MCE2618683.1;Name=MCE2618683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349604.1;locus_tag=LVR01_05280;product=GIY-YIG nuclease family protein;protein_id=MCE2618683.1;transl_table=11 JAJSBG010000014.1 Genbank gene 28400 28600 . + . ID=gene-LVR01_05285;Name=LVR01_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05285 JAJSBG010000014.1 GeneMarkS-2+ CDS 28400 28600 . + 0 ID=cds-MCE2618684.1;Parent=gene-LVR01_05285;Dbxref=NCBI_GP:MCE2618684.1;Name=MCE2618684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05285;product=hypothetical protein;protein_id=MCE2618684.1;transl_table=11 JAJSBG010000014.1 Genbank gene 28693 29628 . + . ID=gene-LVR01_05290;Name=LVR01_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05290 JAJSBG010000014.1 Protein Homology CDS 28693 29628 . + 0 ID=cds-MCE2618685.1;Parent=gene-LVR01_05290;Dbxref=NCBI_GP:MCE2618685.1;Name=MCE2618685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=LVR01_05290;product=manganese-dependent inorganic pyrophosphatase;protein_id=MCE2618685.1;transl_table=11 JAJSBG010000014.1 Genbank gene 29839 30333 . + . ID=gene-LVR01_05295;Name=LVR01_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05295 JAJSBG010000014.1 Protein Homology CDS 29839 30333 . + 0 ID=cds-MCE2618686.1;Parent=gene-LVR01_05295;Dbxref=NCBI_GP:MCE2618686.1;Name=MCE2618686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578394.1;locus_tag=LVR01_05295;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=MCE2618686.1;transl_table=11 JAJSBG010000014.1 Genbank gene 30317 30967 . + . ID=gene-LVR01_05300;Name=LVR01_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05300 JAJSBG010000014.1 Protein Homology CDS 30317 30967 . + 0 ID=cds-MCE2618687.1;Parent=gene-LVR01_05300;Dbxref=NCBI_GP:MCE2618687.1;Name=MCE2618687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614493.1;locus_tag=LVR01_05300;product=DUF1803 domain-containing protein;protein_id=MCE2618687.1;transl_table=11 JAJSBG010000014.1 Genbank gene 31068 31259 . + . ID=gene-LVR01_05305;Name=LVR01_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05305 JAJSBG010000014.1 Protein Homology CDS 31068 31259 . + 0 ID=cds-MCE2618688.1;Parent=gene-LVR01_05305;Dbxref=NCBI_GP:MCE2618688.1;Name=MCE2618688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051182.1;locus_tag=LVR01_05305;product=CsbD family protein;protein_id=MCE2618688.1;transl_table=11 JAJSBG010000014.1 Genbank gene 31306 32751 . - . ID=gene-LVR01_05310;Name=LVR01_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05310 JAJSBG010000014.1 Protein Homology CDS 31306 32751 . - 0 ID=cds-MCE2618689.1;Parent=gene-LVR01_05310;Dbxref=NCBI_GP:MCE2618689.1;Name=MCE2618689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399381.1;locus_tag=LVR01_05310;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=MCE2618689.1;transl_table=11 JAJSBG010000014.1 Genbank gene 32857 34479 . + . ID=gene-LVR01_05315;Name=LVR01_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05315 JAJSBG010000014.1 Protein Homology CDS 32857 34479 . + 0 ID=cds-MCE2618690.1;Parent=gene-LVR01_05315;Dbxref=NCBI_GP:MCE2618690.1;Name=MCE2618690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398581.1;locus_tag=LVR01_05315;product=polysaccharide biosynthesis protein;protein_id=MCE2618690.1;transl_table=11 JAJSBG010000014.1 Genbank gene 34685 36643 . + . ID=gene-LVR01_05320;Name=LVR01_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05320 JAJSBG010000014.1 Protein Homology CDS 34685 36643 . + 0 ID=cds-MCE2618691.1;Parent=gene-LVR01_05320;Dbxref=NCBI_GP:MCE2618691.1;Name=MCE2618691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748873.1;locus_tag=LVR01_05320;product=peptide ABC transporter substrate-binding protein;protein_id=MCE2618691.1;transl_table=11 JAJSBG010000014.1 Genbank pseudogene 36854 37588 . + . ID=gene-LVR01_05325;Name=LVR01_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05325;pseudo=true JAJSBG010000014.1 Protein Homology CDS 36854 37588 . + 0 ID=cds-LVR01_05325;Parent=gene-LVR01_05325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012869.2;locus_tag=LVR01_05325;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAJSBG010000014.1 Genbank gene 37775 38497 . + . ID=gene-LVR01_05330;Name=LVR01_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05330 JAJSBG010000014.1 Protein Homology CDS 37775 38497 . + 0 ID=cds-MCE2618692.1;Parent=gene-LVR01_05330;Dbxref=NCBI_GP:MCE2618692.1;Name=MCE2618692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864981.1;locus_tag=LVR01_05330;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618692.1;transl_table=11 JAJSBG010000014.1 Genbank gene 38655 39749 . + . ID=gene-LVR01_05335;Name=LVR01_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05335 JAJSBG010000014.1 Protein Homology CDS 38655 39749 . + 0 ID=cds-MCE2618693.1;Parent=gene-LVR01_05335;Dbxref=NCBI_GP:MCE2618693.1;Name=MCE2618693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521335.1;locus_tag=LVR01_05335;product=cystathionine gamma-synthase;protein_id=MCE2618693.1;transl_table=11 JAJSBG010000014.1 Genbank gene 39757 40923 . + . ID=gene-LVR01_05340;Name=LVR01_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05340 JAJSBG010000014.1 Protein Homology CDS 39757 40923 . + 0 ID=cds-MCE2618694.1;Parent=gene-LVR01_05340;Dbxref=NCBI_GP:MCE2618694.1;Name=MCE2618694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521357.1;locus_tag=LVR01_05340;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCE2618694.1;transl_table=11 JAJSBG010000014.1 Genbank gene 41016 44114 . + . ID=gene-LVR01_05345;Name=LVR01_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05345 JAJSBG010000014.1 Protein Homology CDS 41016 44114 . + 0 ID=cds-MCE2618695.1;Parent=gene-LVR01_05345;Dbxref=NCBI_GP:MCE2618695.1;Name=MCE2618695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096241.1;locus_tag=LVR01_05345;product=DEAD/DEAH box helicase;protein_id=MCE2618695.1;transl_table=11 JAJSBG010000014.1 Genbank gene 44162 44779 . + . ID=gene-LVR01_05350;Name=LVR01_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05350 JAJSBG010000014.1 Protein Homology CDS 44162 44779 . + 0 ID=cds-MCE2618696.1;Parent=gene-LVR01_05350;Dbxref=NCBI_GP:MCE2618696.1;Name=MCE2618696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808222.1;locus_tag=LVR01_05350;product=cystathionine gamma-synthase;protein_id=MCE2618696.1;transl_table=11 JAJSBG010000014.1 Genbank gene 44790 46124 . + . ID=gene-LVR01_05355;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LVR01_05355 JAJSBG010000014.1 Protein Homology CDS 44790 46124 . + 0 ID=cds-MCE2618697.1;Parent=gene-LVR01_05355;Dbxref=NCBI_GP:MCE2618697.1;Name=MCE2618697.1;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511317.1;locus_tag=LVR01_05355;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=MCE2618697.1;transl_table=11 JAJSBG010000014.1 Genbank gene 46134 46595 . + . ID=gene-LVR01_05360;Name=LVR01_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05360 JAJSBG010000014.1 Protein Homology CDS 46134 46595 . + 0 ID=cds-MCE2618698.1;Parent=gene-LVR01_05360;Dbxref=NCBI_GP:MCE2618698.1;Name=MCE2618698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405282.1;locus_tag=LVR01_05360;product=GNAT family N-acetyltransferase;protein_id=MCE2618698.1;transl_table=11 JAJSBG010000014.1 Genbank gene 46592 47086 . + . ID=gene-LVR01_05365;Name=LVR01_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05365 JAJSBG010000014.1 Protein Homology CDS 46592 47086 . + 0 ID=cds-MCE2618699.1;Parent=gene-LVR01_05365;Dbxref=NCBI_GP:MCE2618699.1;Name=MCE2618699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702438.1;locus_tag=LVR01_05365;product=GNAT family N-acetyltransferase;protein_id=MCE2618699.1;transl_table=11 JAJSBG010000014.1 Genbank gene 47167 48831 . + . ID=gene-LVR01_05370;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LVR01_05370 JAJSBG010000014.1 Protein Homology CDS 47167 48831 . + 0 ID=cds-MCE2618700.1;Parent=gene-LVR01_05370;Dbxref=NCBI_GP:MCE2618700.1;Name=MCE2618700.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291634.1;locus_tag=LVR01_05370;product=endolytic transglycosylase MltG;protein_id=MCE2618700.1;transl_table=11 JAJSBG010000014.1 Genbank gene 48893 49375 . + . ID=gene-LVR01_05375;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LVR01_05375 JAJSBG010000014.1 Protein Homology CDS 48893 49375 . + 0 ID=cds-MCE2618701.1;Parent=gene-LVR01_05375;Dbxref=NCBI_GP:MCE2618701.1;Name=MCE2618701.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370745.1;locus_tag=LVR01_05375;product=transcription elongation factor GreA;protein_id=MCE2618701.1;transl_table=11 JAJSBG010000014.1 Genbank gene 49536 49687 . - . ID=gene-LVR01_05380;Name=LVR01_05380;end_range=49687,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05380;partial=true JAJSBG010000014.1 Protein Homology CDS 49536 49687 . - 2 ID=cds-MCE2618702.1;Parent=gene-LVR01_05380;Dbxref=NCBI_GP:MCE2618702.1;Name=MCE2618702.1;end_range=49687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_05380;partial=true;product=IS630 family transposase;protein_id=MCE2618702.1;transl_table=11 ##sequence-region JAJSBG010000015.1 1 48901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000015.1 Genbank region 1 48901 . + . ID=JAJSBG010000015.1:1..48901;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000015.1 Genbank pseudogene 1 957 . + . ID=gene-LVR01_05385;Name=LVR01_05385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05385;pseudo=true JAJSBG010000015.1 Protein Homology CDS 1 957 . + 1 ID=cds-LVR01_05385;Parent=gene-LVR01_05385;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611511.1;locus_tag=LVR01_05385;product=IS3 family transposase;pseudo=true;transl_table=11 JAJSBG010000015.1 Genbank gene 1179 1385 . - . ID=gene-LVR01_05390;Name=LVR01_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05390 JAJSBG010000015.1 Protein Homology CDS 1179 1385 . - 0 ID=cds-MCE2618703.1;Parent=gene-LVR01_05390;Dbxref=NCBI_GP:MCE2618703.1;Name=MCE2618703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915303.1;locus_tag=LVR01_05390;product=hypothetical protein;protein_id=MCE2618703.1;transl_table=11 JAJSBG010000015.1 Genbank pseudogene 1463 2035 . + . ID=gene-LVR01_05395;Name=LVR01_05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05395;pseudo=true JAJSBG010000015.1 Protein Homology CDS 1463 2035 . + 0 ID=cds-LVR01_05395;Parent=gene-LVR01_05395;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399145.1;locus_tag=LVR01_05395;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000015.1 Genbank gene 3080 5338 . - . ID=gene-LVR01_05400;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=LVR01_05400 JAJSBG010000015.1 Protein Homology CDS 3080 5338 . - 0 ID=cds-MCE2618704.1;Parent=gene-LVR01_05400;Dbxref=NCBI_GP:MCE2618704.1;Name=MCE2618704.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950172.1;locus_tag=LVR01_05400;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=MCE2618704.1;transl_table=11 JAJSBG010000015.1 Genbank gene 5364 6881 . - . ID=gene-LVR01_05405;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LVR01_05405 JAJSBG010000015.1 Protein Homology CDS 5364 6881 . - 0 ID=cds-MCE2618705.1;Parent=gene-LVR01_05405;Dbxref=NCBI_GP:MCE2618705.1;Name=MCE2618705.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001847831.1;locus_tag=LVR01_05405;product=4-alpha-glucanotransferase;protein_id=MCE2618705.1;transl_table=11 JAJSBG010000015.1 Genbank gene 7542 8813 . + . ID=gene-LVR01_05410;Name=LVR01_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05410 JAJSBG010000015.1 Protein Homology CDS 7542 8813 . + 0 ID=cds-MCE2618706.1;Parent=gene-LVR01_05410;Dbxref=NCBI_GP:MCE2618706.1;Name=MCE2618706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095461.1;locus_tag=LVR01_05410;product=extracellular solute-binding protein;protein_id=MCE2618706.1;transl_table=11 JAJSBG010000015.1 Genbank gene 8925 10217 . + . ID=gene-LVR01_05415;Name=LVR01_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05415 JAJSBG010000015.1 Protein Homology CDS 8925 10217 . + 0 ID=cds-MCE2618707.1;Parent=gene-LVR01_05415;Dbxref=NCBI_GP:MCE2618707.1;Name=MCE2618707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414940.1;locus_tag=LVR01_05415;product=ABC transporter permease subunit;protein_id=MCE2618707.1;transl_table=11 JAJSBG010000015.1 Genbank gene 10219 11061 . + . ID=gene-LVR01_05420;Name=LVR01_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05420 JAJSBG010000015.1 Protein Homology CDS 10219 11061 . + 0 ID=cds-MCE2618708.1;Parent=gene-LVR01_05420;Dbxref=NCBI_GP:MCE2618708.1;Name=MCE2618708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065636.1;locus_tag=LVR01_05420;product=sugar ABC transporter permease;protein_id=MCE2618708.1;transl_table=11 JAJSBG010000015.1 Genbank gene 11323 12123 . + . ID=gene-LVR01_05425;Name=LVR01_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05425 JAJSBG010000015.1 Protein Homology CDS 11323 12123 . + 0 ID=cds-MCE2618709.1;Parent=gene-LVR01_05425;Dbxref=NCBI_GP:MCE2618709.1;Name=MCE2618709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938258.1;locus_tag=LVR01_05425;product=DUF1189 domain-containing protein;protein_id=MCE2618709.1;transl_table=11 JAJSBG010000015.1 Genbank gene 12133 13119 . + . ID=gene-LVR01_05430;Name=LVR01_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05430 JAJSBG010000015.1 Protein Homology CDS 12133 13119 . + 0 ID=cds-MCE2618710.1;Parent=gene-LVR01_05430;Dbxref=NCBI_GP:MCE2618710.1;Name=MCE2618710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145427.1;locus_tag=LVR01_05430;product=LacI family DNA-binding transcriptional regulator;protein_id=MCE2618710.1;transl_table=11 JAJSBG010000015.1 Genbank gene 13260 13496 . + . ID=gene-LVR01_05435;Name=LVR01_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05435 JAJSBG010000015.1 GeneMarkS-2+ CDS 13260 13496 . + 0 ID=cds-MCE2618711.1;Parent=gene-LVR01_05435;Dbxref=NCBI_GP:MCE2618711.1;Name=MCE2618711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05435;product=hypothetical protein;protein_id=MCE2618711.1;transl_table=11 JAJSBG010000015.1 Genbank gene 13500 14441 . - . ID=gene-LVR01_05440;Name=LVR01_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05440 JAJSBG010000015.1 Protein Homology CDS 13500 14441 . - 0 ID=cds-MCE2618712.1;Parent=gene-LVR01_05440;Dbxref=NCBI_GP:MCE2618712.1;Name=MCE2618712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806289.1;locus_tag=LVR01_05440;product=YitT family protein;protein_id=MCE2618712.1;transl_table=11 JAJSBG010000015.1 Genbank gene 14419 16182 . - . ID=gene-LVR01_05445;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LVR01_05445 JAJSBG010000015.1 Protein Homology CDS 14419 16182 . - 0 ID=cds-MCE2618713.1;Parent=gene-LVR01_05445;Dbxref=NCBI_GP:MCE2618713.1;Name=MCE2618713.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830881.1;locus_tag=LVR01_05445;product=aspartate--tRNA ligase;protein_id=MCE2618713.1;transl_table=11 JAJSBG010000015.1 Genbank gene 16339 16569 . - . ID=gene-LVR01_05450;Name=LVR01_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05450 JAJSBG010000015.1 Protein Homology CDS 16339 16569 . - 0 ID=cds-MCE2618714.1;Parent=gene-LVR01_05450;Dbxref=NCBI_GP:MCE2618714.1;Name=MCE2618714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832182.1;locus_tag=LVR01_05450;product=hypothetical protein;protein_id=MCE2618714.1;transl_table=11 JAJSBG010000015.1 Genbank gene 16587 17228 . - . ID=gene-LVR01_05455;Name=LVR01_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05455 JAJSBG010000015.1 Protein Homology CDS 16587 17228 . - 0 ID=cds-MCE2618715.1;Parent=gene-LVR01_05455;Dbxref=NCBI_GP:MCE2618715.1;Name=MCE2618715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258056.1;locus_tag=LVR01_05455;product=CPBP family intramembrane metalloprotease;protein_id=MCE2618715.1;transl_table=11 JAJSBG010000015.1 Genbank gene 17240 17983 . - . ID=gene-LVR01_05460;Name=LVR01_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05460 JAJSBG010000015.1 Protein Homology CDS 17240 17983 . - 0 ID=cds-MCE2618716.1;Parent=gene-LVR01_05460;Dbxref=NCBI_GP:MCE2618716.1;Name=MCE2618716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000412276.1;locus_tag=LVR01_05460;product=DUF3169 family protein;protein_id=MCE2618716.1;transl_table=11 JAJSBG010000015.1 Genbank gene 17995 18183 . - . ID=gene-LVR01_05465;Name=LVR01_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05465 JAJSBG010000015.1 Protein Homology CDS 17995 18183 . - 0 ID=cds-MCE2618717.1;Parent=gene-LVR01_05465;Dbxref=NCBI_GP:MCE2618717.1;Name=MCE2618717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046125.1;locus_tag=LVR01_05465;product=hypothetical protein;protein_id=MCE2618717.1;transl_table=11 JAJSBG010000015.1 Genbank gene 18183 18389 . - . ID=gene-LVR01_05470;Name=LVR01_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05470 JAJSBG010000015.1 Protein Homology CDS 18183 18389 . - 0 ID=cds-MCE2618718.1;Parent=gene-LVR01_05470;Dbxref=NCBI_GP:MCE2618718.1;Name=MCE2618718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176227.1;locus_tag=LVR01_05470;product=helix-turn-helix transcriptional regulator;protein_id=MCE2618718.1;transl_table=11 JAJSBG010000015.1 Genbank gene 18399 18863 . - . ID=gene-LVR01_05475;Name=LVR01_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05475 JAJSBG010000015.1 Protein Homology CDS 18399 18863 . - 0 ID=cds-MCE2618719.1;Parent=gene-LVR01_05475;Dbxref=NCBI_GP:MCE2618719.1;Name=MCE2618719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566071.1;locus_tag=LVR01_05475;product=hypothetical protein;protein_id=MCE2618719.1;transl_table=11 JAJSBG010000015.1 Genbank gene 18863 20143 . - . ID=gene-LVR01_05480;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LVR01_05480 JAJSBG010000015.1 Protein Homology CDS 18863 20143 . - 0 ID=cds-MCE2618720.1;Parent=gene-LVR01_05480;Dbxref=NCBI_GP:MCE2618720.1;Name=MCE2618720.1;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775829.1;locus_tag=LVR01_05480;product=histidine--tRNA ligase;protein_id=MCE2618720.1;transl_table=11 JAJSBG010000015.1 Genbank gene 20220 21467 . - . ID=gene-LVR01_05485;Name=LVR01_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05485 JAJSBG010000015.1 Protein Homology CDS 20220 21467 . - 0 ID=cds-MCE2618721.1;Parent=gene-LVR01_05485;Dbxref=NCBI_GP:MCE2618721.1;Name=MCE2618721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864357.1;locus_tag=LVR01_05485;product=transporter;protein_id=MCE2618721.1;transl_table=11 JAJSBG010000015.1 Genbank gene 21668 22519 . - . ID=gene-LVR01_05490;Name=LVR01_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05490 JAJSBG010000015.1 Protein Homology CDS 21668 22519 . - 0 ID=cds-MCE2618722.1;Parent=gene-LVR01_05490;Dbxref=NCBI_GP:MCE2618722.1;Name=MCE2618722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398326.1;locus_tag=LVR01_05490;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=MCE2618722.1;transl_table=11 JAJSBG010000015.1 Genbank gene 22643 22984 . + . ID=gene-LVR01_05495;Name=LVR01_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05495 JAJSBG010000015.1 Protein Homology CDS 22643 22984 . + 0 ID=cds-MCE2618723.1;Parent=gene-LVR01_05495;Dbxref=NCBI_GP:MCE2618723.1;Name=MCE2618723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250665.1;locus_tag=LVR01_05495;product=metal-sulfur cluster assembly factor;protein_id=MCE2618723.1;transl_table=11 JAJSBG010000015.1 Genbank gene 23241 24944 . - . ID=gene-LVR01_05500;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LVR01_05500 JAJSBG010000015.1 Protein Homology CDS 23241 24944 . - 0 ID=cds-MCE2618724.1;Parent=gene-LVR01_05500;Dbxref=NCBI_GP:MCE2618724.1;Name=MCE2618724.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137341.1;locus_tag=LVR01_05500;product=dihydroxy-acid dehydratase;protein_id=MCE2618724.1;transl_table=11 JAJSBG010000015.1 Genbank gene 25195 26127 . - . ID=gene-LVR01_05505;Name=LVR01_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05505 JAJSBG010000015.1 Protein Homology CDS 25195 26127 . - 0 ID=cds-MCE2618725.1;Parent=gene-LVR01_05505;Dbxref=NCBI_GP:MCE2618725.1;Name=MCE2618725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862431.1;locus_tag=LVR01_05505;product=transketolase family protein;protein_id=MCE2618725.1;transl_table=11 JAJSBG010000015.1 Genbank gene 26124 26981 . - . ID=gene-LVR01_05510;Name=LVR01_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05510 JAJSBG010000015.1 Protein Homology CDS 26124 26981 . - 0 ID=cds-MCE2618726.1;Parent=gene-LVR01_05510;Dbxref=NCBI_GP:MCE2618726.1;Name=MCE2618726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397351.1;locus_tag=LVR01_05510;product=transketolase;protein_id=MCE2618726.1;transl_table=11 JAJSBG010000015.1 Genbank pseudogene 26985 28332 . - . ID=gene-LVR01_05515;Name=LVR01_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05515;pseudo=true JAJSBG010000015.1 Protein Homology CDS 26985 28332 . - 0 ID=cds-LVR01_05515;Parent=gene-LVR01_05515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975284.1;locus_tag=LVR01_05515;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 JAJSBG010000015.1 Genbank gene 28345 28629 . - . ID=gene-LVR01_05520;Name=LVR01_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05520 JAJSBG010000015.1 Protein Homology CDS 28345 28629 . - 0 ID=cds-MCE2618727.1;Parent=gene-LVR01_05520;Dbxref=NCBI_GP:MCE2618727.1;Name=MCE2618727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089859.1;locus_tag=LVR01_05520;product=PTS sugar transporter subunit IIB;protein_id=MCE2618727.1;transl_table=11 JAJSBG010000015.1 Genbank gene 28633 30663 . - . ID=gene-LVR01_05525;Name=LVR01_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05525 JAJSBG010000015.1 Protein Homology CDS 28633 30663 . - 0 ID=cds-MCE2618728.1;Parent=gene-LVR01_05525;Dbxref=NCBI_GP:MCE2618728.1;Name=MCE2618728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460919.1;locus_tag=LVR01_05525;product=BglG family transcription antiterminator;protein_id=MCE2618728.1;transl_table=11 JAJSBG010000015.1 Genbank pseudogene 30838 30993 . + . ID=gene-LVR01_05530;Name=LVR01_05530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05530;pseudo=true JAJSBG010000015.1 Protein Homology CDS 30838 30993 . + 0 ID=cds-LVR01_05530;Parent=gene-LVR01_05530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136853.1;locus_tag=LVR01_05530;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000015.1 Genbank gene 30996 31196 . + . ID=gene-LVR01_05535;Name=LVR01_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05535 JAJSBG010000015.1 Protein Homology CDS 30996 31196 . + 0 ID=cds-MCE2618729.1;Parent=gene-LVR01_05535;Dbxref=NCBI_GP:MCE2618729.1;Name=MCE2618729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399403.1;locus_tag=LVR01_05535;product=PTS ascorbate transporter subunit IIC;protein_id=MCE2618729.1;transl_table=11 JAJSBG010000015.1 Genbank gene 31348 31530 . + . ID=gene-LVR01_05540;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LVR01_05540 JAJSBG010000015.1 Protein Homology CDS 31348 31530 . + 0 ID=cds-MCE2618730.1;Parent=gene-LVR01_05540;Dbxref=NCBI_GP:MCE2618730.1;Name=MCE2618730.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=LVR01_05540;product=50S ribosomal protein L32;protein_id=MCE2618730.1;transl_table=11 JAJSBG010000015.1 Genbank gene 31546 31695 . + . ID=gene-LVR01_05545;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LVR01_05545 JAJSBG010000015.1 Protein Homology CDS 31546 31695 . + 0 ID=cds-MCE2618731.1;Parent=gene-LVR01_05545;Dbxref=NCBI_GP:MCE2618731.1;Name=MCE2618731.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=LVR01_05545;product=50S ribosomal protein L33;protein_id=MCE2618731.1;transl_table=11 JAJSBG010000015.1 Genbank gene 32218 33339 . + . ID=gene-LVR01_05550;Name=LVR01_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05550 JAJSBG010000015.1 Protein Homology CDS 32218 33339 . + 0 ID=cds-MCE2618732.1;Parent=gene-LVR01_05550;Dbxref=NCBI_GP:MCE2618732.1;Name=MCE2618732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771214.1;locus_tag=LVR01_05550;product=Fic family protein;protein_id=MCE2618732.1;transl_table=11 JAJSBG010000015.1 Genbank gene 33685 35286 . - . ID=gene-LVR01_05555;Name=LVR01_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05555 JAJSBG010000015.1 Protein Homology CDS 33685 35286 . - 0 ID=cds-MCE2618733.1;Parent=gene-LVR01_05555;Dbxref=NCBI_GP:MCE2618733.1;Name=MCE2618733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083785.1;locus_tag=LVR01_05555;product=type I restriction-modification system subunit M;protein_id=MCE2618733.1;transl_table=11 JAJSBG010000015.1 Genbank gene 35571 36776 . - . ID=gene-LVR01_05560;Name=LVR01_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05560 JAJSBG010000015.1 Protein Homology CDS 35571 36776 . - 0 ID=cds-MCE2618734.1;Parent=gene-LVR01_05560;Dbxref=NCBI_GP:MCE2618734.1;Name=MCE2618734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010712955.1;locus_tag=LVR01_05560;product=restriction endonuclease subunit S;protein_id=MCE2618734.1;transl_table=11 JAJSBG010000015.1 Genbank gene 36773 37849 . - . ID=gene-LVR01_05565;Name=LVR01_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05565 JAJSBG010000015.1 Protein Homology CDS 36773 37849 . - 0 ID=cds-MCE2618735.1;Parent=gene-LVR01_05565;Dbxref=NCBI_GP:MCE2618735.1;Name=MCE2618735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413037.1;locus_tag=LVR01_05565;product=bacteriophage abortive infection AbiH family protein;protein_id=MCE2618735.1;transl_table=11 JAJSBG010000015.1 Genbank gene 38110 39351 . + . ID=gene-LVR01_05570;Name=LVR01_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05570 JAJSBG010000015.1 Protein Homology CDS 38110 39351 . + 0 ID=cds-MCE2618736.1;Parent=gene-LVR01_05570;Dbxref=NCBI_GP:MCE2618736.1;Name=MCE2618736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109412.1;locus_tag=LVR01_05570;product=Fic family protein;protein_id=MCE2618736.1;transl_table=11 JAJSBG010000015.1 Genbank gene 39505 42873 . - . ID=gene-LVR01_05575;Name=LVR01_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05575 JAJSBG010000015.1 Protein Homology CDS 39505 42873 . - 0 ID=cds-MCE2618737.1;Parent=gene-LVR01_05575;Dbxref=NCBI_GP:MCE2618737.1;Name=MCE2618737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284752.1;locus_tag=LVR01_05575;product=type I restriction endonuclease subunit R;protein_id=MCE2618737.1;transl_table=11 JAJSBG010000015.1 Genbank gene 43297 43845 . + . ID=gene-LVR01_05580;Name=LVR01_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05580 JAJSBG010000015.1 Protein Homology CDS 43297 43845 . + 0 ID=cds-MCE2618738.1;Parent=gene-LVR01_05580;Dbxref=NCBI_GP:MCE2618738.1;Name=MCE2618738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335401.1;locus_tag=LVR01_05580;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MCE2618738.1;transl_table=11 JAJSBG010000015.1 Genbank gene 43856 45133 . + . ID=gene-LVR01_05585;Name=LVR01_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05585 JAJSBG010000015.1 Protein Homology CDS 43856 45133 . + 0 ID=cds-MCE2618739.1;Parent=gene-LVR01_05585;Dbxref=NCBI_GP:MCE2618739.1;Name=MCE2618739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926699.1;locus_tag=LVR01_05585;product=FRG domain-containing protein;protein_id=MCE2618739.1;transl_table=11 JAJSBG010000015.1 Genbank gene 45249 46496 . - . ID=gene-LVR01_05590;Name=LVR01_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05590 JAJSBG010000015.1 Protein Homology CDS 45249 46496 . - 0 ID=cds-MCE2618740.1;Parent=gene-LVR01_05590;Dbxref=NCBI_GP:MCE2618740.1;Name=MCE2618740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134326.1;locus_tag=LVR01_05590;product=toxic anion resistance protein;protein_id=MCE2618740.1;transl_table=11 JAJSBG010000015.1 Genbank gene 46518 47324 . - . ID=gene-LVR01_05595;Name=LVR01_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05595 JAJSBG010000015.1 Protein Homology CDS 46518 47324 . - 0 ID=cds-MCE2618741.1;Parent=gene-LVR01_05595;Dbxref=NCBI_GP:MCE2618741.1;Name=MCE2618741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269925.1;locus_tag=LVR01_05595;product=hypothetical protein;protein_id=MCE2618741.1;transl_table=11 JAJSBG010000015.1 Genbank pseudogene 47986 48399 . - . ID=gene-LVR01_05600;Name=LVR01_05600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05600;pseudo=true JAJSBG010000015.1 Protein Homology CDS 47986 48399 . - 0 ID=cds-LVR01_05600;Parent=gene-LVR01_05600;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611511.1;locus_tag=LVR01_05600;product=IS3 family transposase;pseudo=true;transl_table=11 JAJSBG010000015.1 Genbank pseudogene 48438 48901 . + . ID=gene-LVR01_05605;Name=LVR01_05605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05605;pseudo=true JAJSBG010000015.1 Protein Homology CDS 48438 48901 . + 0 ID=cds-LVR01_05605;Parent=gene-LVR01_05605;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_05605;product=IS630 transposase-related protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000016.1 1 47985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000016.1 Genbank region 1 47985 . + . ID=JAJSBG010000016.1:1..47985;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000016.1 Genbank gene 1 201 . - . ID=gene-LVR01_05610;Name=LVR01_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05610;partial=true;start_range=.,1 JAJSBG010000016.1 GeneMarkS-2+ CDS 1 201 . - 0 ID=cds-MCE2618742.1;Parent=gene-LVR01_05610;Dbxref=NCBI_GP:MCE2618742.1;Name=MCE2618742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05610;partial=true;product=hypothetical protein;protein_id=MCE2618742.1;start_range=.,1;transl_table=11 JAJSBG010000016.1 Genbank gene 285 1085 . - . ID=gene-LVR01_05615;Name=LVR01_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05615 JAJSBG010000016.1 Protein Homology CDS 285 1085 . - 0 ID=cds-MCE2618743.1;Parent=gene-LVR01_05615;Dbxref=NCBI_GP:MCE2618743.1;Name=MCE2618743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162344.1;locus_tag=LVR01_05615;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2618743.1;transl_table=11 JAJSBG010000016.1 Genbank gene 1288 2706 . + . ID=gene-LVR01_05620;Name=LVR01_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05620 JAJSBG010000016.1 Protein Homology CDS 1288 2706 . + 0 ID=cds-MCE2618744.1;Parent=gene-LVR01_05620;Dbxref=NCBI_GP:MCE2618744.1;Name=MCE2618744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359314.1;locus_tag=LVR01_05620;product=NCS2 family permease;protein_id=MCE2618744.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 2759 3467 . + . ID=gene-LVR01_05625;Name=LVR01_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05625;pseudo=true JAJSBG010000016.1 Protein Homology CDS 2759 3467 . + 0 ID=cds-LVR01_05625;Parent=gene-LVR01_05625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260476.1;locus_tag=LVR01_05625;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 3561 4535 . + . ID=gene-LVR01_05630;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LVR01_05630 JAJSBG010000016.1 Protein Homology CDS 3561 4535 . + 0 ID=cds-MCE2618745.1;Parent=gene-LVR01_05630;Dbxref=NCBI_GP:MCE2618745.1;Name=MCE2618745.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255785.1;locus_tag=LVR01_05630;product=dihydropteroate synthase;protein_id=MCE2618745.1;transl_table=11 JAJSBG010000016.1 Genbank gene 4537 5859 . + . ID=gene-LVR01_05635;Name=LVR01_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05635 JAJSBG010000016.1 Protein Homology CDS 4537 5859 . + 0 ID=cds-MCE2618746.1;Parent=gene-LVR01_05635;Dbxref=NCBI_GP:MCE2618746.1;Name=MCE2618746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658404.1;locus_tag=LVR01_05635;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MCE2618746.1;transl_table=11 JAJSBG010000016.1 Genbank gene 5840 6394 . + . ID=gene-LVR01_05640;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LVR01_05640 JAJSBG010000016.1 Protein Homology CDS 5840 6394 . + 0 ID=cds-MCE2618747.1;Parent=gene-LVR01_05640;Dbxref=NCBI_GP:MCE2618747.1;Name=MCE2618747.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155259.1;locus_tag=LVR01_05640;product=GTP cyclohydrolase I FolE;protein_id=MCE2618747.1;transl_table=11 JAJSBG010000016.1 Genbank gene 6553 7365 . + . ID=gene-LVR01_05645;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LVR01_05645 JAJSBG010000016.1 Protein Homology CDS 6553 7365 . + 0 ID=cds-MCE2618748.1;Parent=gene-LVR01_05645;Dbxref=NCBI_GP:MCE2618748.1;Name=MCE2618748.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397195.1;locus_tag=LVR01_05645;product=dihydroneopterin aldolase;protein_id=MCE2618748.1;transl_table=11 JAJSBG010000016.1 Genbank gene 7571 7888 . - . ID=gene-LVR01_05650;Name=LVR01_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05650 JAJSBG010000016.1 Protein Homology CDS 7571 7888 . - 0 ID=cds-MCE2618749.1;Parent=gene-LVR01_05650;Dbxref=NCBI_GP:MCE2618749.1;Name=MCE2618749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886024.1;locus_tag=LVR01_05650;product=DUF960 domain-containing protein;protein_id=MCE2618749.1;transl_table=11 JAJSBG010000016.1 Genbank gene 8243 8689 . + . ID=gene-LVR01_05655;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LVR01_05655 JAJSBG010000016.1 Protein Homology CDS 8243 8689 . + 0 ID=cds-MCE2618750.1;Parent=gene-LVR01_05655;Dbxref=NCBI_GP:MCE2618750.1;Name=MCE2618750.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=LVR01_05655;product=50S ribosomal protein L13;protein_id=MCE2618750.1;transl_table=11 JAJSBG010000016.1 Genbank gene 8709 9101 . + . ID=gene-LVR01_05660;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LVR01_05660 JAJSBG010000016.1 Protein Homology CDS 8709 9101 . + 0 ID=cds-MCE2618751.1;Parent=gene-LVR01_05660;Dbxref=NCBI_GP:MCE2618751.1;Name=MCE2618751.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=LVR01_05660;product=30S ribosomal protein S9;protein_id=MCE2618751.1;transl_table=11 JAJSBG010000016.1 Genbank gene 9419 10039 . + . ID=gene-LVR01_05665;Name=LVR01_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05665 JAJSBG010000016.1 Protein Homology CDS 9419 10039 . + 0 ID=cds-MCE2618752.1;Parent=gene-LVR01_05665;Dbxref=NCBI_GP:MCE2618752.1;Name=MCE2618752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839915.1;locus_tag=LVR01_05665;product=hypothetical protein;protein_id=MCE2618752.1;transl_table=11 JAJSBG010000016.1 Genbank gene 10229 10672 . + . ID=gene-LVR01_05670;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LVR01_05670 JAJSBG010000016.1 Protein Homology CDS 10229 10672 . + 0 ID=cds-MCE2618753.1;Parent=gene-LVR01_05670;Dbxref=NCBI_GP:MCE2618753.1;Name=MCE2618753.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288243.1;locus_tag=LVR01_05670;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=MCE2618753.1;transl_table=11 JAJSBG010000016.1 Genbank gene 10662 11180 . + . ID=gene-LVR01_05675;Name=LVR01_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05675 JAJSBG010000016.1 Protein Homology CDS 10662 11180 . + 0 ID=cds-MCE2618754.1;Parent=gene-LVR01_05675;Dbxref=NCBI_GP:MCE2618754.1;Name=MCE2618754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455545.1;locus_tag=LVR01_05675;product=GNAT family N-acetyltransferase;protein_id=MCE2618754.1;transl_table=11 JAJSBG010000016.1 Genbank gene 11188 12204 . + . ID=gene-LVR01_05680;Name=LVR01_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05680 JAJSBG010000016.1 Protein Homology CDS 11188 12204 . + 0 ID=cds-MCE2618755.1;Parent=gene-LVR01_05680;Dbxref=NCBI_GP:MCE2618755.1;Name=MCE2618755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239264.1;locus_tag=LVR01_05680;product=LCP family protein;protein_id=MCE2618755.1;transl_table=11 JAJSBG010000016.1 Genbank gene 12288 13544 . + . ID=gene-LVR01_05685;Name=LVR01_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05685 JAJSBG010000016.1 Protein Homology CDS 12288 13544 . + 0 ID=cds-MCE2618756.1;Parent=gene-LVR01_05685;Dbxref=NCBI_GP:MCE2618756.1;Name=MCE2618756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642700.1;locus_tag=LVR01_05685;product=competence/damage-inducible protein A;protein_id=MCE2618756.1;transl_table=11 JAJSBG010000016.1 Genbank gene 13599 14765 . + . ID=gene-LVR01_05690;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LVR01_05690 JAJSBG010000016.1 Protein Homology CDS 13599 14765 . + 0 ID=cds-MCE2618757.1;Parent=gene-LVR01_05690;Dbxref=NCBI_GP:MCE2618757.1;Name=MCE2618757.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397020.1;locus_tag=LVR01_05690;product=recombinase RecA;protein_id=MCE2618757.1;transl_table=11 JAJSBG010000016.1 Genbank gene 14880 16250 . + . ID=gene-LVR01_05695;Name=LVR01_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05695 JAJSBG010000016.1 Protein Homology CDS 14880 16250 . + 0 ID=cds-MCE2618758.1;Parent=gene-LVR01_05695;Dbxref=NCBI_GP:MCE2618758.1;Name=MCE2618758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036275.1;locus_tag=LVR01_05695;product=MATE family efflux transporter;protein_id=MCE2618758.1;transl_table=11 JAJSBG010000016.1 Genbank gene 16625 17575 . + . ID=gene-LVR01_05700;Name=LVR01_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05700 JAJSBG010000016.1 Protein Homology CDS 16625 17575 . + 0 ID=cds-MCE2618759.1;Parent=gene-LVR01_05700;Dbxref=NCBI_GP:MCE2618759.1;Name=MCE2618759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405235.1;locus_tag=LVR01_05700;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2618759.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 17946 18095 . + . ID=gene-LVR01_05705;Name=LVR01_05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05705;pseudo=true JAJSBG010000016.1 Protein Homology CDS 17946 18095 . + 0 ID=cds-LVR01_05705;Parent=gene-LVR01_05705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289348.1;locus_tag=LVR01_05705;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 18291 19049 . + . ID=gene-LVR01_05710;Name=LVR01_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05710 JAJSBG010000016.1 Protein Homology CDS 18291 19049 . + 0 ID=cds-MCE2618760.1;Parent=gene-LVR01_05710;Dbxref=NCBI_GP:MCE2618760.1;Name=MCE2618760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565870.1;locus_tag=LVR01_05710;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MCE2618760.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 19042 19464 . + . ID=gene-LVR01_05715;Name=LVR01_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05715;pseudo=true JAJSBG010000016.1 Protein Homology CDS 19042 19464 . + 0 ID=cds-LVR01_05715;Parent=gene-LVR01_05715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204059.1;locus_tag=LVR01_05715;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 20230 20733 . + . ID=gene-LVR01_05720;Name=LVR01_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05720 JAJSBG010000016.1 Protein Homology CDS 20230 20733 . + 0 ID=cds-MCE2618761.1;Parent=gene-LVR01_05720;Dbxref=NCBI_GP:MCE2618761.1;Name=MCE2618761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841550.1;locus_tag=LVR01_05720;product=PBECR4 domain-containing protein;protein_id=MCE2618761.1;transl_table=11 JAJSBG010000016.1 Genbank gene 21515 24595 . + . ID=gene-LVR01_05725;Name=LVR01_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05725 JAJSBG010000016.1 Protein Homology CDS 21515 24595 . + 0 ID=cds-MCE2618762.1;Parent=gene-LVR01_05725;Dbxref=NCBI_GP:MCE2618762.1;Name=MCE2618762.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LVR01_05725;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2618762.1;transl_table=11 JAJSBG010000016.1 Genbank gene 24913 25371 . + . ID=gene-LVR01_05730;Name=LVR01_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05730 JAJSBG010000016.1 Protein Homology CDS 24913 25371 . + 0 ID=cds-MCE2618763.1;Parent=gene-LVR01_05730;Dbxref=NCBI_GP:MCE2618763.1;Name=MCE2618763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186958.1;locus_tag=LVR01_05730;product=DUF4231 domain-containing protein;protein_id=MCE2618763.1;transl_table=11 JAJSBG010000016.1 Genbank gene 25384 25992 . + . ID=gene-LVR01_05735;Name=LVR01_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05735 JAJSBG010000016.1 Protein Homology CDS 25384 25992 . + 0 ID=cds-MCE2618764.1;Parent=gene-LVR01_05735;Dbxref=NCBI_GP:MCE2618764.1;Name=MCE2618764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083609.1;locus_tag=LVR01_05735;product=hypothetical protein;protein_id=MCE2618764.1;transl_table=11 JAJSBG010000016.1 Genbank gene 25985 26395 . + . ID=gene-LVR01_05740;Name=LVR01_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05740 JAJSBG010000016.1 Protein Homology CDS 25985 26395 . + 0 ID=cds-MCE2618765.1;Parent=gene-LVR01_05740;Dbxref=NCBI_GP:MCE2618765.1;Name=MCE2618765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595750.1;locus_tag=LVR01_05740;product=hypothetical protein;protein_id=MCE2618765.1;transl_table=11 JAJSBG010000016.1 Genbank gene 26406 27821 . + . ID=gene-LVR01_05745;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=LVR01_05745 JAJSBG010000016.1 Protein Homology CDS 26406 27821 . + 0 ID=cds-MCE2618766.1;Parent=gene-LVR01_05745;Dbxref=NCBI_GP:MCE2618766.1;Name=MCE2618766.1;gbkey=CDS;gene=ply;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284359.1;locus_tag=LVR01_05745;product=cholesterol-dependent cytolysin pneumolysin;protein_id=MCE2618766.1;transl_table=11 JAJSBG010000016.1 Genbank gene 28506 29222 . + . ID=gene-LVR01_05750;Name=LVR01_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05750 JAJSBG010000016.1 Protein Homology CDS 28506 29222 . + 0 ID=cds-MCE2618767.1;Parent=gene-LVR01_05750;Dbxref=NCBI_GP:MCE2618767.1;Name=MCE2618767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604432.1;locus_tag=LVR01_05750;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=MCE2618767.1;transl_table=11 JAJSBG010000016.1 Genbank gene 29395 29865 . + . ID=gene-LVR01_05755;Name=LVR01_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05755 JAJSBG010000016.1 Protein Homology CDS 29395 29865 . + 0 ID=cds-MCE2618768.1;Parent=gene-LVR01_05755;Dbxref=NCBI_GP:MCE2618768.1;Name=MCE2618768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000360543.1;locus_tag=LVR01_05755;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=MCE2618768.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 29840 31608 . + . ID=gene-LVR01_05760;Name=LVR01_05760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05760;pseudo=true JAJSBG010000016.1 Protein Homology CDS 29840 31608 . + 0 ID=cds-LVR01_05760;Parent=gene-LVR01_05760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731792.1;locus_tag=LVR01_05760;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 31598 33358 . + . ID=gene-LVR01_05765;Name=LVR01_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05765 JAJSBG010000016.1 Protein Homology CDS 31598 33358 . + 0 ID=cds-MCE2618769.1;Parent=gene-LVR01_05765;Dbxref=NCBI_GP:MCE2618769.1;Name=MCE2618769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155117.1;locus_tag=LVR01_05765;product=ABC transporter ATP-binding protein/permease;protein_id=MCE2618769.1;transl_table=11 JAJSBG010000016.1 Genbank gene 33424 33786 . + . ID=gene-LVR01_05770;Name=LVR01_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05770 JAJSBG010000016.1 Protein Homology CDS 33424 33786 . + 0 ID=cds-MCE2618770.1;Parent=gene-LVR01_05770;Dbxref=NCBI_GP:MCE2618770.1;Name=MCE2618770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398125.1;locus_tag=LVR01_05770;product=DUF2200 family protein;protein_id=MCE2618770.1;transl_table=11 JAJSBG010000016.1 Genbank gene 33783 34286 . + . ID=gene-LVR01_05775;Name=LVR01_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05775 JAJSBG010000016.1 Protein Homology CDS 33783 34286 . + 0 ID=cds-MCE2618771.1;Parent=gene-LVR01_05775;Dbxref=NCBI_GP:MCE2618771.1;Name=MCE2618771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800945.1;locus_tag=LVR01_05775;product=phosphatase PAP2 family protein;protein_id=MCE2618771.1;transl_table=11 JAJSBG010000016.1 Genbank gene 34506 34952 . + . ID=gene-LVR01_05780;Name=LVR01_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05780 JAJSBG010000016.1 Protein Homology CDS 34506 34952 . + 0 ID=cds-MCE2618772.1;Parent=gene-LVR01_05780;Dbxref=NCBI_GP:MCE2618772.1;Name=MCE2618772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776610.1;locus_tag=LVR01_05780;product=LytTR family DNA-binding domain-containing protein;protein_id=MCE2618772.1;transl_table=11 JAJSBG010000016.1 Genbank gene 34957 35631 . + . ID=gene-LVR01_05785;Name=LVR01_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05785 JAJSBG010000016.1 Protein Homology CDS 34957 35631 . + 0 ID=cds-MCE2618773.1;Parent=gene-LVR01_05785;Dbxref=NCBI_GP:MCE2618773.1;Name=MCE2618773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725744.1;locus_tag=LVR01_05785;product=hypothetical protein;protein_id=MCE2618773.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 35873 36070 . + . ID=gene-LVR01_05790;Name=LVR01_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05790;pseudo=true JAJSBG010000016.1 Protein Homology CDS 35873 36070 . + 0 ID=cds-LVR01_05790;Parent=gene-LVR01_05790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724444.1;locus_tag=LVR01_05790;product=N-acetylmuramoyl-L-alanine amidase family protein;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 36275 36574 . + . ID=gene-LVR01_05795;Name=LVR01_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05795 JAJSBG010000016.1 Protein Homology CDS 36275 36574 . + 0 ID=cds-MCE2618774.1;Parent=gene-LVR01_05795;Dbxref=NCBI_GP:MCE2618774.1;Name=MCE2618774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013971.1;locus_tag=LVR01_05795;product=DUF4651 domain-containing protein;protein_id=MCE2618774.1;transl_table=11 JAJSBG010000016.1 Genbank gene 36571 36888 . + . ID=gene-LVR01_05800;Name=LVR01_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05800 JAJSBG010000016.1 Protein Homology CDS 36571 36888 . + 0 ID=cds-MCE2618775.1;Parent=gene-LVR01_05800;Dbxref=NCBI_GP:MCE2618775.1;Name=MCE2618775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615765.1;locus_tag=LVR01_05800;product=thioredoxin family protein;protein_id=MCE2618775.1;transl_table=11 JAJSBG010000016.1 Genbank gene 36904 37530 . + . ID=gene-LVR01_05805;Name=LVR01_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05805 JAJSBG010000016.1 Protein Homology CDS 36904 37530 . + 0 ID=cds-MCE2618776.1;Parent=gene-LVR01_05805;Dbxref=NCBI_GP:MCE2618776.1;Name=MCE2618776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466778.1;locus_tag=LVR01_05805;product=DUF4479 and tRNA-binding domain-containing protein;protein_id=MCE2618776.1;transl_table=11 JAJSBG010000016.1 Genbank gene 37572 38333 . + . ID=gene-LVR01_05810;Name=LVR01_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05810 JAJSBG010000016.1 Protein Homology CDS 37572 38333 . + 0 ID=cds-MCE2618777.1;Parent=gene-LVR01_05810;Dbxref=NCBI_GP:MCE2618777.1;Name=MCE2618777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258754.1;locus_tag=LVR01_05810;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MCE2618777.1;transl_table=11 JAJSBG010000016.1 Genbank gene 38410 38805 . + . ID=gene-LVR01_05815;Name=LVR01_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05815 JAJSBG010000016.1 Protein Homology CDS 38410 38805 . + 0 ID=cds-MCE2618778.1;Parent=gene-LVR01_05815;Dbxref=NCBI_GP:MCE2618778.1;Name=MCE2618778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282444.1;locus_tag=LVR01_05815;product=single-stranded DNA-binding protein;protein_id=MCE2618778.1;transl_table=11 JAJSBG010000016.1 Genbank gene 39075 39359 . + . ID=gene-LVR01_05820;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LVR01_05820 JAJSBG010000016.1 Protein Homology CDS 39075 39359 . + 0 ID=cds-MCE2618779.1;Parent=gene-LVR01_05820;Dbxref=NCBI_GP:MCE2618779.1;Name=MCE2618779.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730535.1;locus_tag=LVR01_05820;product=co-chaperone GroES;protein_id=MCE2618779.1;transl_table=11 JAJSBG010000016.1 Genbank gene 39375 40997 . + . ID=gene-LVR01_05825;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LVR01_05825 JAJSBG010000016.1 Protein Homology CDS 39375 40997 . + 0 ID=cds-MCE2618780.1;Parent=gene-LVR01_05825;Dbxref=NCBI_GP:MCE2618780.1;Name=MCE2618780.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166362.1;locus_tag=LVR01_05825;product=chaperonin GroEL;protein_id=MCE2618780.1;transl_table=11 JAJSBG010000016.1 Genbank gene 41135 41890 . + . ID=gene-LVR01_05830;Name=LVR01_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05830 JAJSBG010000016.1 Protein Homology CDS 41135 41890 . + 0 ID=cds-MCE2618781.1;Parent=gene-LVR01_05830;Dbxref=NCBI_GP:MCE2618781.1;Name=MCE2618781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567550.1;locus_tag=LVR01_05830;product=epoxyqueuosine reductase QueH;protein_id=MCE2618781.1;transl_table=11 JAJSBG010000016.1 Genbank gene 42336 43109 . + . ID=gene-LVR01_05835;Name=LVR01_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05835 JAJSBG010000016.1 Protein Homology CDS 42336 43109 . + 0 ID=cds-MCE2618782.1;Parent=gene-LVR01_05835;Dbxref=NCBI_GP:MCE2618782.1;Name=MCE2618782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566051.1;locus_tag=LVR01_05835;product=class I SAM-dependent methyltransferase;protein_id=MCE2618782.1;transl_table=11 JAJSBG010000016.1 Genbank gene 43122 43979 . + . ID=gene-LVR01_05840;Name=LVR01_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05840 JAJSBG010000016.1 Protein Homology CDS 43122 43979 . + 0 ID=cds-MCE2618783.1;Parent=gene-LVR01_05840;Dbxref=NCBI_GP:MCE2618783.1;Name=MCE2618783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800706.1;locus_tag=LVR01_05840;product=helix-turn-helix domain-containing protein;protein_id=MCE2618783.1;transl_table=11 JAJSBG010000016.1 Genbank gene 44326 44859 . - . ID=gene-LVR01_05845;Name=LVR01_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05845 JAJSBG010000016.1 Protein Homology CDS 44326 44859 . - 0 ID=cds-MCE2618784.1;Parent=gene-LVR01_05845;Dbxref=NCBI_GP:MCE2618784.1;Name=MCE2618784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=LVR01_05845;product=DUF402 domain-containing protein;protein_id=MCE2618784.1;transl_table=11 JAJSBG010000016.1 Genbank pseudogene 44948 45725 . - . ID=gene-LVR01_05850;Name=recX;gbkey=Gene;gene=recX;gene_biotype=pseudogene;locus_tag=LVR01_05850;pseudo=true JAJSBG010000016.1 Protein Homology CDS 44948 45725 . - 0 ID=cds-LVR01_05850;Parent=gene-LVR01_05850;Note=frameshifted;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705102.1;locus_tag=LVR01_05850;product=recombination regulator RecX;pseudo=true;transl_table=11 JAJSBG010000016.1 Genbank gene 45735 46511 . - . ID=gene-LVR01_05855;Name=LVR01_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05855 JAJSBG010000016.1 Protein Homology CDS 45735 46511 . - 0 ID=cds-MCE2618785.1;Parent=gene-LVR01_05855;Dbxref=NCBI_GP:MCE2618785.1;Name=MCE2618785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086342.1;locus_tag=LVR01_05855;product=aminoglycoside 3'-phosphotransferase;protein_id=MCE2618785.1;transl_table=11 JAJSBG010000016.1 Genbank gene 46568 47923 . + . ID=gene-LVR01_05860;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LVR01_05860 JAJSBG010000016.1 Protein Homology CDS 46568 47923 . + 0 ID=cds-MCE2618786.1;Parent=gene-LVR01_05860;Dbxref=NCBI_GP:MCE2618786.1;Name=MCE2618786.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050265.1;locus_tag=LVR01_05860;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MCE2618786.1;transl_table=11 ##sequence-region JAJSBG010000017.1 1 45717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000017.1 Genbank region 1 45717 . + . ID=JAJSBG010000017.1:1..45717;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000017.1 Genbank gene 1044 1571 . - . ID=gene-LVR01_05865;Name=LVR01_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05865 JAJSBG010000017.1 GeneMarkS-2+ CDS 1044 1571 . - 0 ID=cds-MCE2618787.1;Parent=gene-LVR01_05865;Dbxref=NCBI_GP:MCE2618787.1;Name=MCE2618787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_05865;product=DUF4148 domain-containing protein;protein_id=MCE2618787.1;transl_table=11 JAJSBG010000017.1 Genbank gene 1650 1856 . + . ID=gene-LVR01_05870;Name=LVR01_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05870 JAJSBG010000017.1 Protein Homology CDS 1650 1856 . + 0 ID=cds-MCE2618788.1;Parent=gene-LVR01_05870;Dbxref=NCBI_GP:MCE2618788.1;Name=MCE2618788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915303.1;locus_tag=LVR01_05870;product=hypothetical protein;protein_id=MCE2618788.1;transl_table=11 JAJSBG010000017.1 Genbank gene 2209 3057 . - . ID=gene-LVR01_05875;Name=LVR01_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05875 JAJSBG010000017.1 Protein Homology CDS 2209 3057 . - 0 ID=cds-MCE2618789.1;Parent=gene-LVR01_05875;Dbxref=NCBI_GP:MCE2618789.1;Name=MCE2618789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095523.1;locus_tag=LVR01_05875;product=methyltransferase domain-containing protein;protein_id=MCE2618789.1;transl_table=11 JAJSBG010000017.1 Genbank gene 3208 3486 . + . ID=gene-LVR01_05880;Name=LVR01_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05880 JAJSBG010000017.1 Protein Homology CDS 3208 3486 . + 0 ID=cds-MCE2618790.1;Parent=gene-LVR01_05880;Dbxref=NCBI_GP:MCE2618790.1;Name=MCE2618790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003075836.1;locus_tag=LVR01_05880;product=DUF6110 family protein;protein_id=MCE2618790.1;transl_table=11 JAJSBG010000017.1 Genbank gene 3488 5548 . + . ID=gene-LVR01_05885;Name=LVR01_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05885 JAJSBG010000017.1 Protein Homology CDS 3488 5548 . + 0 ID=cds-MCE2618791.1;Parent=gene-LVR01_05885;Dbxref=NCBI_GP:MCE2618791.1;Name=MCE2618791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729486.1;locus_tag=LVR01_05885;product=heavy metal translocating P-type ATPase;protein_id=MCE2618791.1;transl_table=11 JAJSBG010000017.1 Genbank gene 5626 6882 . - . ID=gene-LVR01_05890;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LVR01_05890 JAJSBG010000017.1 Protein Homology CDS 5626 6882 . - 0 ID=cds-MCE2618792.1;Parent=gene-LVR01_05890;Dbxref=NCBI_GP:MCE2618792.1;Name=MCE2618792.1;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546895.1;locus_tag=LVR01_05890;product=tyrosine--tRNA ligase;protein_id=MCE2618792.1;transl_table=11 JAJSBG010000017.1 Genbank gene 7024 9489 . + . ID=gene-LVR01_05895;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=LVR01_05895 JAJSBG010000017.1 Protein Homology CDS 7024 9489 . + 0 ID=cds-MCE2618793.1;Parent=gene-LVR01_05895;Dbxref=NCBI_GP:MCE2618793.1;Name=MCE2618793.1;gbkey=CDS;gene=pbp1b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866735.1;locus_tag=LVR01_05895;product=penicillin-binding protein PBP1B;protein_id=MCE2618793.1;transl_table=11 JAJSBG010000017.1 Genbank gene 9554 10465 . + . ID=gene-LVR01_05900;Name=LVR01_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05900 JAJSBG010000017.1 Protein Homology CDS 9554 10465 . + 0 ID=cds-MCE2618794.1;Parent=gene-LVR01_05900;Dbxref=NCBI_GP:MCE2618794.1;Name=MCE2618794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285066.1;locus_tag=LVR01_05900;product=DMT family transporter;protein_id=MCE2618794.1;transl_table=11 JAJSBG010000017.1 Genbank gene 10696 11394 . + . ID=gene-LVR01_05905;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LVR01_05905 JAJSBG010000017.1 Protein Homology CDS 10696 11394 . + 0 ID=cds-MCE2618795.1;Parent=gene-LVR01_05905;Dbxref=NCBI_GP:MCE2618795.1;Name=MCE2618795.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466315.1;locus_tag=LVR01_05905;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=MCE2618795.1;transl_table=11 JAJSBG010000017.1 Genbank gene 11461 12591 . + . ID=gene-LVR01_05910;Name=LVR01_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05910 JAJSBG010000017.1 Protein Homology CDS 11461 12591 . + 0 ID=cds-MCE2618796.1;Parent=gene-LVR01_05910;Dbxref=NCBI_GP:MCE2618796.1;Name=MCE2618796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006151341.1;locus_tag=LVR01_05910;product=N-acetyldiaminopimelate deacetylase;protein_id=MCE2618796.1;transl_table=11 JAJSBG010000017.1 Genbank gene 12603 13142 . + . ID=gene-LVR01_05915;Name=LVR01_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05915 JAJSBG010000017.1 Protein Homology CDS 12603 13142 . + 0 ID=cds-MCE2618797.1;Parent=gene-LVR01_05915;Dbxref=NCBI_GP:MCE2618797.1;Name=MCE2618797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863197.1;locus_tag=LVR01_05915;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=MCE2618797.1;transl_table=11 JAJSBG010000017.1 Genbank gene 13126 13800 . + . ID=gene-LVR01_05920;Name=LVR01_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05920 JAJSBG010000017.1 Protein Homology CDS 13126 13800 . + 0 ID=cds-MCE2618798.1;Parent=gene-LVR01_05920;Dbxref=NCBI_GP:MCE2618798.1;Name=MCE2618798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658505.1;locus_tag=LVR01_05920;product=rhomboid family intramembrane serine protease;protein_id=MCE2618798.1;transl_table=11 JAJSBG010000017.1 Genbank gene 13961 14860 . - . ID=gene-LVR01_05925;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LVR01_05925 JAJSBG010000017.1 Protein Homology CDS 13961 14860 . - 0 ID=cds-MCE2618799.1;Parent=gene-LVR01_05925;Dbxref=NCBI_GP:MCE2618799.1;Name=MCE2618799.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202214.1;locus_tag=LVR01_05925;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=MCE2618799.1;transl_table=11 JAJSBG010000017.1 Genbank gene 14882 15898 . - . ID=gene-LVR01_05930;Name=LVR01_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05930 JAJSBG010000017.1 Protein Homology CDS 14882 15898 . - 0 ID=cds-MCE2618800.1;Parent=gene-LVR01_05930;Dbxref=NCBI_GP:MCE2618800.1;Name=MCE2618800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415108.1;locus_tag=LVR01_05930;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MCE2618800.1;transl_table=11 JAJSBG010000017.1 Genbank gene 16311 16562 . + . ID=gene-LVR01_05935;Name=LVR01_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05935 JAJSBG010000017.1 Protein Homology CDS 16311 16562 . + 0 ID=cds-MCE2618801.1;Parent=gene-LVR01_05935;Dbxref=NCBI_GP:MCE2618801.1;Name=MCE2618801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827494.1;locus_tag=LVR01_05935;product=arginyl-tRNA synthetase;protein_id=MCE2618801.1;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 16677 17111 . - . ID=gene-LVR01_05940;Name=LVR01_05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05940;pseudo=true JAJSBG010000017.1 Protein Homology CDS 16677 17111 . - 0 ID=cds-LVR01_05940;Parent=gene-LVR01_05940;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=LVR01_05940;product=transposase;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank gene 17179 17829 . - . ID=gene-LVR01_05945;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LVR01_05945 JAJSBG010000017.1 Protein Homology CDS 17179 17829 . - 0 ID=cds-MCE2618802.1;Parent=gene-LVR01_05945;Dbxref=NCBI_GP:MCE2618802.1;Name=MCE2618802.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245788.1;locus_tag=LVR01_05945;product=phosphate signaling complex protein PhoU;protein_id=MCE2618802.1;transl_table=11 JAJSBG010000017.1 Genbank gene 17844 18596 . - . ID=gene-LVR01_05950;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LVR01_05950 JAJSBG010000017.1 Protein Homology CDS 17844 18596 . - 0 ID=cds-MCE2618803.1;Parent=gene-LVR01_05950;Dbxref=NCBI_GP:MCE2618803.1;Name=MCE2618803.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003101281.1;locus_tag=LVR01_05950;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MCE2618803.1;transl_table=11 JAJSBG010000017.1 Genbank gene 18598 19413 . - . ID=gene-LVR01_05955;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LVR01_05955 JAJSBG010000017.1 Protein Homology CDS 18598 19413 . - 0 ID=cds-MCE2618804.1;Parent=gene-LVR01_05955;Dbxref=NCBI_GP:MCE2618804.1;Name=MCE2618804.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057412.1;locus_tag=LVR01_05955;product=phosphate ABC transporter permease PstA;protein_id=MCE2618804.1;transl_table=11 JAJSBG010000017.1 Genbank gene 19406 20269 . - . ID=gene-LVR01_05960;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LVR01_05960 JAJSBG010000017.1 Protein Homology CDS 19406 20269 . - 0 ID=cds-MCE2618805.1;Parent=gene-LVR01_05960;Dbxref=NCBI_GP:MCE2618805.1;Name=MCE2618805.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595184.1;locus_tag=LVR01_05960;product=phosphate ABC transporter permease subunit PstC;protein_id=MCE2618805.1;transl_table=11 JAJSBG010000017.1 Genbank gene 20387 21262 . - . ID=gene-LVR01_05965;Name=LVR01_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05965 JAJSBG010000017.1 Protein Homology CDS 20387 21262 . - 0 ID=cds-MCE2618806.1;Parent=gene-LVR01_05965;Dbxref=NCBI_GP:MCE2618806.1;Name=MCE2618806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669496.1;locus_tag=LVR01_05965;product=extracellular solute-binding protein;protein_id=MCE2618806.1;transl_table=11 JAJSBG010000017.1 Genbank gene 21428 22759 . - . ID=gene-LVR01_05970;Name=LVR01_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_05970 JAJSBG010000017.1 Protein Homology CDS 21428 22759 . - 0 ID=cds-MCE2618807.1;Parent=gene-LVR01_05970;Dbxref=NCBI_GP:MCE2618807.1;Name=MCE2618807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833277.1;locus_tag=LVR01_05970;product=two-component sensor histidine kinase;protein_id=MCE2618807.1;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 22760 23466 . - . ID=gene-LVR01_05975;Name=LVR01_05975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05975;pseudo=true JAJSBG010000017.1 Protein Homology CDS 22760 23466 . - 0 ID=cds-LVR01_05975;Parent=gene-LVR01_05975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166478.1;locus_tag=LVR01_05975;product=response regulator transcription factor;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 23550 23690 . - . ID=gene-LVR01_05980;Name=LVR01_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05980;pseudo=true JAJSBG010000017.1 Protein Homology CDS 23550 23690 . - 0 ID=cds-LVR01_05980;Parent=gene-LVR01_05980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855144.1;locus_tag=LVR01_05980;product=cupin domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 23683 24196 . + . ID=gene-LVR01_05985;Name=LVR01_05985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_05985;pseudo=true JAJSBG010000017.1 Protein Homology CDS 23683 24196 . + 0 ID=cds-LVR01_05985;Parent=gene-LVR01_05985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_05985;product=transposase;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank gene 24909 26600 . - . ID=gene-LVR01_05990;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LVR01_05990 JAJSBG010000017.1 Protein Homology CDS 24909 26600 . - 0 ID=cds-MCE2618808.1;Parent=gene-LVR01_05990;Dbxref=NCBI_GP:MCE2618808.1;Name=MCE2618808.1;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729659.1;locus_tag=LVR01_05990;product=arginine--tRNA ligase;protein_id=MCE2618808.1;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 26736 27183 . + . ID=gene-LVR01_05995;Name=argR;gbkey=Gene;gene=argR;gene_biotype=pseudogene;locus_tag=LVR01_05995;pseudo=true JAJSBG010000017.1 Protein Homology CDS 26736 27183 . + 0 ID=cds-LVR01_05995;Parent=gene-LVR01_05995;Note=frameshifted;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227366.1;locus_tag=LVR01_05995;product=arginine repressor;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank gene 27234 29768 . + . ID=gene-LVR01_06000;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LVR01_06000 JAJSBG010000017.1 Protein Homology CDS 27234 29768 . + 0 ID=cds-MCE2618809.1;Parent=gene-LVR01_06000;Dbxref=NCBI_GP:MCE2618809.1;Name=MCE2618809.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399485.1;locus_tag=LVR01_06000;product=DNA mismatch repair protein MutS;protein_id=MCE2618809.1;transl_table=11 JAJSBG010000017.1 Genbank gene 29914 31620 . + . ID=gene-LVR01_06005;Name=patA;gbkey=Gene;gene=patA;gene_biotype=protein_coding;locus_tag=LVR01_06005 JAJSBG010000017.1 Protein Homology CDS 29914 31620 . + 0 ID=cds-MCE2618810.1;Parent=gene-LVR01_06005;Dbxref=NCBI_GP:MCE2618810.1;Name=MCE2618810.1;gbkey=CDS;gene=patA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905723.1;locus_tag=LVR01_06005;product=multidrug efflux ABC transporter subunit PatA;protein_id=MCE2618810.1;transl_table=11 JAJSBG010000017.1 Genbank gene 31622 33388 . + . ID=gene-LVR01_06010;Name=patB;gbkey=Gene;gene=patB;gene_biotype=protein_coding;locus_tag=LVR01_06010 JAJSBG010000017.1 Protein Homology CDS 31622 33388 . + 0 ID=cds-MCE2618811.1;Parent=gene-LVR01_06010;Dbxref=NCBI_GP:MCE2618811.1;Name=MCE2618811.1;gbkey=CDS;gene=patB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859866.1;locus_tag=LVR01_06010;product=multidrug efflux ABC transporter subunit PatB;protein_id=MCE2618811.1;transl_table=11 JAJSBG010000017.1 Genbank gene 33677 34366 . + . ID=gene-LVR01_06015;Name=LVR01_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06015 JAJSBG010000017.1 Protein Homology CDS 33677 34366 . + 0 ID=cds-MCE2618812.1;Parent=gene-LVR01_06015;Dbxref=NCBI_GP:MCE2618812.1;Name=MCE2618812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466883.1;locus_tag=LVR01_06015;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=MCE2618812.1;transl_table=11 JAJSBG010000017.1 Genbank gene 34537 35886 . + . ID=gene-LVR01_06020;Name=LVR01_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06020 JAJSBG010000017.1 Protein Homology CDS 34537 35886 . + 0 ID=cds-MCE2618813.1;Parent=gene-LVR01_06020;Dbxref=NCBI_GP:MCE2618813.1;Name=MCE2618813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399450.1;locus_tag=LVR01_06020;product=glucose-6-phosphate isomerase;protein_id=MCE2618813.1;transl_table=11 JAJSBG010000017.1 Genbank gene 36017 37477 . + . ID=gene-LVR01_06025;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LVR01_06025 JAJSBG010000017.1 Protein Homology CDS 36017 37477 . + 0 ID=cds-MCE2618814.1;Parent=gene-LVR01_06025;Dbxref=NCBI_GP:MCE2618814.1;Name=MCE2618814.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519940.1;locus_tag=LVR01_06025;product=glutamate--tRNA ligase;protein_id=MCE2618814.1;transl_table=11 JAJSBG010000017.1 Genbank gene 37491 37925 . + . ID=gene-LVR01_06030;Name=LVR01_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06030 JAJSBG010000017.1 Protein Homology CDS 37491 37925 . + 0 ID=cds-MCE2618815.1;Parent=gene-LVR01_06030;Dbxref=NCBI_GP:MCE2618815.1;Name=MCE2618815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397028.1;locus_tag=LVR01_06030;product=cytidine deaminase;protein_id=MCE2618815.1;transl_table=11 JAJSBG010000017.1 Genbank gene 38039 38278 . + . ID=gene-LVR01_06035;Name=LVR01_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06035 JAJSBG010000017.1 Protein Homology CDS 38039 38278 . + 0 ID=cds-MCE2618816.1;Parent=gene-LVR01_06035;Dbxref=NCBI_GP:MCE2618816.1;Name=MCE2618816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907299.1;locus_tag=LVR01_06035;product=hypothetical protein;protein_id=MCE2618816.1;transl_table=11 JAJSBG010000017.1 Genbank gene 38597 39655 . + . ID=gene-LVR01_06040;Name=LVR01_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06040 JAJSBG010000017.1 Protein Homology CDS 38597 39655 . + 0 ID=cds-MCE2618817.1;Parent=gene-LVR01_06040;Dbxref=NCBI_GP:MCE2618817.1;Name=MCE2618817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649458.1;locus_tag=LVR01_06040;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=MCE2618817.1;transl_table=11 JAJSBG010000017.1 Genbank gene 39806 40171 . + . ID=gene-LVR01_06045;Name=LVR01_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06045 JAJSBG010000017.1 Protein Homology CDS 39806 40171 . + 0 ID=cds-MCE2618818.1;Parent=gene-LVR01_06045;Dbxref=NCBI_GP:MCE2618818.1;Name=MCE2618818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262492.1;locus_tag=LVR01_06045;product=DUF1033 family protein;protein_id=MCE2618818.1;transl_table=11 JAJSBG010000017.1 Genbank gene 40247 41188 . + . ID=gene-LVR01_06050;Name=LVR01_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06050 JAJSBG010000017.1 Protein Homology CDS 40247 41188 . + 0 ID=cds-MCE2618819.1;Parent=gene-LVR01_06050;Dbxref=NCBI_GP:MCE2618819.1;Name=MCE2618819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249584.1;locus_tag=LVR01_06050;product=GspE/PulE family protein;protein_id=MCE2618819.1;transl_table=11 JAJSBG010000017.1 Genbank gene 41136 42152 . + . ID=gene-LVR01_06055;Name=LVR01_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06055 JAJSBG010000017.1 Protein Homology CDS 41136 42152 . + 0 ID=cds-MCE2618820.1;Parent=gene-LVR01_06055;Dbxref=NCBI_GP:MCE2618820.1;Name=MCE2618820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355375.1;locus_tag=LVR01_06055;product=type II secretion system F family protein;protein_id=MCE2618820.1;transl_table=11 JAJSBG010000017.1 Genbank gene 42154 42477 . + . ID=gene-LVR01_06060;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=LVR01_06060 JAJSBG010000017.1 Protein Homology CDS 42154 42477 . + 0 ID=cds-MCE2618821.1;Parent=gene-LVR01_06060;Dbxref=NCBI_GP:MCE2618821.1;Name=MCE2618821.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006150232.1;locus_tag=LVR01_06060;product=comG operon protein ComGC;protein_id=MCE2618821.1;transl_table=11 JAJSBG010000017.1 Genbank gene 42440 42874 . + . ID=gene-LVR01_06065;Name=LVR01_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06065 JAJSBG010000017.1 Protein Homology CDS 42440 42874 . + 0 ID=cds-MCE2618822.1;Parent=gene-LVR01_06065;Dbxref=NCBI_GP:MCE2618822.1;Name=MCE2618822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180052.1;locus_tag=LVR01_06065;product=type II secretion system GspH family protein;protein_id=MCE2618822.1;transl_table=11 JAJSBG010000017.1 Genbank gene 42879 43139 . + . ID=gene-LVR01_06070;Name=LVR01_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06070 JAJSBG010000017.1 Protein Homology CDS 42879 43139 . + 0 ID=cds-MCE2618823.1;Parent=gene-LVR01_06070;Dbxref=NCBI_GP:MCE2618823.1;Name=MCE2618823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000601743.1;locus_tag=LVR01_06070;product=hypothetical protein;protein_id=MCE2618823.1;transl_table=11 JAJSBG010000017.1 Genbank gene 43102 43563 . + . ID=gene-LVR01_06075;Name=LVR01_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06075 JAJSBG010000017.1 Protein Homology CDS 43102 43563 . + 0 ID=cds-MCE2618824.1;Parent=gene-LVR01_06075;Dbxref=NCBI_GP:MCE2618824.1;Name=MCE2618824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000250539.1;locus_tag=LVR01_06075;product=competence protein ComGF;protein_id=MCE2618824.1;transl_table=11 JAJSBG010000017.1 Genbank gene 43541 43954 . + . ID=gene-LVR01_06080;Name=LVR01_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06080 JAJSBG010000017.1 Protein Homology CDS 43541 43954 . + 0 ID=cds-MCE2618825.1;Parent=gene-LVR01_06080;Dbxref=NCBI_GP:MCE2618825.1;Name=MCE2618825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399570.1;locus_tag=LVR01_06080;product=competence protein ComGF;protein_id=MCE2618825.1;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 43987 44112 . + . ID=gene-LVR01_06085;Name=LVR01_06085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06085;pseudo=true JAJSBG010000017.1 Protein Homology CDS 43987 44112 . + 0 ID=cds-LVR01_06085;Parent=gene-LVR01_06085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679792.1;locus_tag=LVR01_06085;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank gene 44691 45167 . - . ID=gene-LVR01_06090;Name=LVR01_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06090 JAJSBG010000017.1 Protein Homology CDS 44691 45167 . - 0 ID=cds-MCE2618826.1;Parent=gene-LVR01_06090;Dbxref=NCBI_GP:MCE2618826.1;Name=MCE2618826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777685.1;locus_tag=LVR01_06090;product=GNAT family N-acetyltransferase;protein_id=MCE2618826.1;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 45317 45424 . - . ID=gene-LVR01_06095;Name=LVR01_06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06095;pseudo=true JAJSBG010000017.1 Protein Homology CDS 45317 45424 . - 0 ID=cds-LVR01_06095;Parent=gene-LVR01_06095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_06095;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 JAJSBG010000017.1 Genbank pseudogene 45527 45717 . - . ID=gene-LVR01_06100;Name=LVR01_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06100;pseudo=true JAJSBG010000017.1 Protein Homology CDS 45527 45717 . - 2 ID=cds-LVR01_06100;Parent=gene-LVR01_06100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_06100;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000018.1 1 42291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000018.1 Genbank region 1 42291 . + . ID=JAJSBG010000018.1:1..42291;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000018.1 Genbank pseudogene 1 579 . - . ID=gene-LVR01_06105;Name=LVR01_06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06105;pseudo=true JAJSBG010000018.1 Protein Homology CDS 1 579 . - 0 ID=cds-LVR01_06105;Parent=gene-LVR01_06105;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842126.1;locus_tag=LVR01_06105;product=transposase family protein;pseudo=true;transl_table=11 JAJSBG010000018.1 Genbank gene 734 1444 . - . ID=gene-LVR01_06110;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=LVR01_06110 JAJSBG010000018.1 Protein Homology CDS 734 1444 . - 0 ID=cds-MCE2618827.1;Parent=gene-LVR01_06110;Dbxref=NCBI_GP:MCE2618827.1;Name=MCE2618827.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865045.1;locus_tag=LVR01_06110;product=trehalose operon repressor;protein_id=MCE2618827.1;transl_table=11 JAJSBG010000018.1 Genbank pseudogene 1629 3596 . + . ID=gene-LVR01_06115;Name=treP;gbkey=Gene;gene=treP;gene_biotype=pseudogene;locus_tag=LVR01_06115;pseudo=true JAJSBG010000018.1 Protein Homology CDS 1629 3596 . + 0 ID=cds-LVR01_06115;Parent=gene-LVR01_06115;Note=internal stop;gbkey=CDS;gene=treP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864201.1;locus_tag=LVR01_06115;product=PTS system trehalose-specific EIIBC component;pseudo=true;transl_table=11 JAJSBG010000018.1 Genbank gene 3774 5399 . + . ID=gene-LVR01_06120;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=LVR01_06120 JAJSBG010000018.1 Protein Homology CDS 3774 5399 . + 0 ID=cds-MCE2618828.1;Parent=gene-LVR01_06120;Dbxref=NCBI_GP:MCE2618828.1;Name=MCE2618828.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171230.1;locus_tag=LVR01_06120;product=alpha%2Calpha-phosphotrehalase;protein_id=MCE2618828.1;transl_table=11 JAJSBG010000018.1 Genbank gene 5949 7232 . + . ID=gene-LVR01_06125;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LVR01_06125 JAJSBG010000018.1 Protein Homology CDS 5949 7232 . + 0 ID=cds-MCE2618829.1;Parent=gene-LVR01_06125;Dbxref=NCBI_GP:MCE2618829.1;Name=MCE2618829.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466710.1;locus_tag=LVR01_06125;product=trigger factor;protein_id=MCE2618829.1;transl_table=11 JAJSBG010000018.1 Genbank pseudogene 7386 9753 . - . ID=gene-LVR01_06130;Name=LVR01_06130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06130;pseudo=true JAJSBG010000018.1 Protein Homology CDS 7386 9753 . - 0 ID=cds-LVR01_06130;Parent=gene-LVR01_06130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000454449.1;locus_tag=LVR01_06130;product=ATP-dependent RecD-like DNA helicase;pseudo=true;transl_table=11 JAJSBG010000018.1 Genbank gene 10033 10647 . - . ID=gene-LVR01_06135;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LVR01_06135 JAJSBG010000018.1 Protein Homology CDS 10033 10647 . - 0 ID=cds-MCE2618830.1;Parent=gene-LVR01_06135;Dbxref=NCBI_GP:MCE2618830.1;Name=MCE2618830.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001048155.1;locus_tag=LVR01_06135;product=signal peptidase I;protein_id=MCE2618830.1;transl_table=11 JAJSBG010000018.1 Genbank gene 10651 11532 . - . ID=gene-LVR01_06140;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=LVR01_06140 JAJSBG010000018.1 Protein Homology CDS 10651 11532 . - 0 ID=cds-MCE2618831.1;Parent=gene-LVR01_06140;Dbxref=NCBI_GP:MCE2618831.1;Name=MCE2618831.1;gbkey=CDS;gene=rnhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146880.1;locus_tag=LVR01_06140;product=ribonuclease HIII;protein_id=MCE2618831.1;transl_table=11 JAJSBG010000018.1 Genbank gene 11619 11921 . + . ID=gene-LVR01_06145;Name=LVR01_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06145 JAJSBG010000018.1 Protein Homology CDS 11619 11921 . + 0 ID=cds-MCE2618832.1;Parent=gene-LVR01_06145;Dbxref=NCBI_GP:MCE2618832.1;Name=MCE2618832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006150060.1;locus_tag=LVR01_06145;product=cell division protein ZapA;protein_id=MCE2618832.1;transl_table=11 JAJSBG010000018.1 Genbank gene 11918 12466 . + . ID=gene-LVR01_06150;Name=LVR01_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06150 JAJSBG010000018.1 Protein Homology CDS 11918 12466 . + 0 ID=cds-MCE2618833.1;Parent=gene-LVR01_06150;Dbxref=NCBI_GP:MCE2618833.1;Name=MCE2618833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622948.1;locus_tag=LVR01_06150;product=CvpA family protein;protein_id=MCE2618833.1;transl_table=11 JAJSBG010000018.1 Genbank gene 12570 14906 . + . ID=gene-LVR01_06155;Name=LVR01_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06155 JAJSBG010000018.1 Protein Homology CDS 12570 14906 . + 0 ID=cds-MCE2618834.1;Parent=gene-LVR01_06155;Dbxref=NCBI_GP:MCE2618834.1;Name=MCE2618834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035046.1;locus_tag=LVR01_06155;product=endonuclease MutS2;protein_id=MCE2618834.1;transl_table=11 JAJSBG010000018.1 Genbank gene 15194 16360 . - . ID=gene-LVR01_06160;Name=LVR01_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06160 JAJSBG010000018.1 Protein Homology CDS 15194 16360 . - 0 ID=cds-MCE2618835.1;Parent=gene-LVR01_06160;Dbxref=NCBI_GP:MCE2618835.1;Name=MCE2618835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160547.1;locus_tag=LVR01_06160;product=IS30 family transposase;protein_id=MCE2618835.1;transl_table=11 JAJSBG010000018.1 cmsearch riboswitch 16615 16703 . + . ID=id-JAJSBG010000018.1:16615..16703;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000018.1 Genbank gene 16794 18116 . + . ID=gene-LVR01_06165;Name=LVR01_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06165 JAJSBG010000018.1 Protein Homology CDS 16794 18116 . + 0 ID=cds-MCE2618836.1;Parent=gene-LVR01_06165;Dbxref=NCBI_GP:MCE2618836.1;Name=MCE2618836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397747.1;locus_tag=LVR01_06165;product=sodium:alanine symporter family protein;protein_id=MCE2618836.1;transl_table=11 JAJSBG010000018.1 Genbank gene 18439 18987 . + . ID=gene-LVR01_06170;Name=LVR01_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06170 JAJSBG010000018.1 Protein Homology CDS 18439 18987 . + 0 ID=cds-MCE2618837.1;Parent=gene-LVR01_06170;Dbxref=NCBI_GP:MCE2618837.1;Name=MCE2618837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206764.1;locus_tag=LVR01_06170;product=carboxymuconolactone decarboxylase family protein;protein_id=MCE2618837.1;transl_table=11 JAJSBG010000018.1 Genbank gene 19098 19997 . + . ID=gene-LVR01_06175;Name=LVR01_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06175 JAJSBG010000018.1 Protein Homology CDS 19098 19997 . + 0 ID=cds-MCE2618838.1;Parent=gene-LVR01_06175;Dbxref=NCBI_GP:MCE2618838.1;Name=MCE2618838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735961.1;locus_tag=LVR01_06175;product=TDT family transporter;protein_id=MCE2618838.1;transl_table=11 JAJSBG010000018.1 Genbank gene 20022 21296 . - . ID=gene-LVR01_06180;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LVR01_06180 JAJSBG010000018.1 Protein Homology CDS 20022 21296 . - 0 ID=cds-MCE2618839.1;Parent=gene-LVR01_06180;Dbxref=NCBI_GP:MCE2618839.1;Name=MCE2618839.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884256.1;locus_tag=LVR01_06180;product=serine--tRNA ligase;protein_id=MCE2618839.1;transl_table=11 JAJSBG010000018.1 Genbank gene 21510 21881 . - . ID=gene-LVR01_06185;Name=LVR01_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06185 JAJSBG010000018.1 Protein Homology CDS 21510 21881 . - 0 ID=cds-MCE2618840.1;Parent=gene-LVR01_06185;Dbxref=NCBI_GP:MCE2618840.1;Name=MCE2618840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079352.1;locus_tag=LVR01_06185;product=DUF956 family protein;protein_id=MCE2618840.1;transl_table=11 JAJSBG010000018.1 Genbank gene 21884 23248 . - . ID=gene-LVR01_06190;Name=LVR01_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06190 JAJSBG010000018.1 Protein Homology CDS 21884 23248 . - 0 ID=cds-MCE2618841.1;Parent=gene-LVR01_06190;Dbxref=NCBI_GP:MCE2618841.1;Name=MCE2618841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251870.1;locus_tag=LVR01_06190;product=aspartate kinase;protein_id=MCE2618841.1;transl_table=11 JAJSBG010000018.1 Genbank gene 23618 24403 . + . ID=gene-LVR01_06195;Name=LVR01_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06195 JAJSBG010000018.1 Protein Homology CDS 23618 24403 . + 0 ID=cds-MCE2618842.1;Parent=gene-LVR01_06195;Dbxref=NCBI_GP:MCE2618842.1;Name=MCE2618842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262908.1;locus_tag=LVR01_06195;product=enoyl-CoA hydratase;protein_id=MCE2618842.1;transl_table=11 JAJSBG010000018.1 Genbank gene 24497 24931 . + . ID=gene-LVR01_06200;Name=LVR01_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06200 JAJSBG010000018.1 Protein Homology CDS 24497 24931 . + 0 ID=cds-MCE2618843.1;Parent=gene-LVR01_06200;Dbxref=NCBI_GP:MCE2618843.1;Name=MCE2618843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520594.1;locus_tag=LVR01_06200;product=MarR family transcriptional regulator;protein_id=MCE2618843.1;transl_table=11 JAJSBG010000018.1 Genbank gene 24931 25905 . + . ID=gene-LVR01_06205;Name=LVR01_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06205 JAJSBG010000018.1 Protein Homology CDS 24931 25905 . + 0 ID=cds-MCE2618844.1;Parent=gene-LVR01_06205;Dbxref=NCBI_GP:MCE2618844.1;Name=MCE2618844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262906.1;locus_tag=LVR01_06205;product=ketoacyl-ACP synthase III;protein_id=MCE2618844.1;transl_table=11 JAJSBG010000018.1 Genbank gene 25964 26188 . + . ID=gene-LVR01_06210;Name=LVR01_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06210 JAJSBG010000018.1 Protein Homology CDS 25964 26188 . + 0 ID=cds-MCE2618845.1;Parent=gene-LVR01_06210;Dbxref=NCBI_GP:MCE2618845.1;Name=MCE2618845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257841.1;locus_tag=LVR01_06210;product=acyl carrier protein;protein_id=MCE2618845.1;transl_table=11 JAJSBG010000018.1 Genbank gene 26411 27385 . + . ID=gene-LVR01_06215;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=LVR01_06215 JAJSBG010000018.1 Protein Homology CDS 26411 27385 . + 0 ID=cds-MCE2618846.1;Parent=gene-LVR01_06215;Dbxref=NCBI_GP:MCE2618846.1;Name=MCE2618846.1;gbkey=CDS;gene=fabK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896881.1;locus_tag=LVR01_06215;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=MCE2618846.1;transl_table=11 JAJSBG010000018.1 Genbank gene 27378 28298 . + . ID=gene-LVR01_06220;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LVR01_06220 JAJSBG010000018.1 Protein Homology CDS 27378 28298 . + 0 ID=cds-MCE2618847.1;Parent=gene-LVR01_06220;Dbxref=NCBI_GP:MCE2618847.1;Name=MCE2618847.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167658.1;locus_tag=LVR01_06220;product=ACP S-malonyltransferase;protein_id=MCE2618847.1;transl_table=11 JAJSBG010000018.1 Genbank gene 28332 29063 . + . ID=gene-LVR01_06225;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LVR01_06225 JAJSBG010000018.1 Protein Homology CDS 28332 29063 . + 0 ID=cds-MCE2618848.1;Parent=gene-LVR01_06225;Dbxref=NCBI_GP:MCE2618848.1;Name=MCE2618848.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398379.1;locus_tag=LVR01_06225;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=MCE2618848.1;transl_table=11 JAJSBG010000018.1 Genbank gene 29085 30320 . + . ID=gene-LVR01_06230;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LVR01_06230 JAJSBG010000018.1 Protein Homology CDS 29085 30320 . + 0 ID=cds-MCE2618849.1;Parent=gene-LVR01_06230;Dbxref=NCBI_GP:MCE2618849.1;Name=MCE2618849.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774039.1;locus_tag=LVR01_06230;product=beta-ketoacyl-ACP synthase II;protein_id=MCE2618849.1;transl_table=11 JAJSBG010000018.1 Genbank gene 30323 30808 . + . ID=gene-LVR01_06235;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LVR01_06235 JAJSBG010000018.1 Protein Homology CDS 30323 30808 . + 0 ID=cds-MCE2618850.1;Parent=gene-LVR01_06235;Dbxref=NCBI_GP:MCE2618850.1;Name=MCE2618850.1;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052236.1;locus_tag=LVR01_06235;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=MCE2618850.1;transl_table=11 JAJSBG010000018.1 Genbank gene 30805 31227 . + . ID=gene-LVR01_06240;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LVR01_06240 JAJSBG010000018.1 Protein Homology CDS 30805 31227 . + 0 ID=cds-MCE2618851.1;Parent=gene-LVR01_06240;Dbxref=NCBI_GP:MCE2618851.1;Name=MCE2618851.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565430.1;locus_tag=LVR01_06240;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=MCE2618851.1;transl_table=11 JAJSBG010000018.1 Genbank gene 31239 32606 . + . ID=gene-LVR01_06245;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LVR01_06245 JAJSBG010000018.1 Protein Homology CDS 31239 32606 . + 0 ID=cds-MCE2618852.1;Parent=gene-LVR01_06245;Dbxref=NCBI_GP:MCE2618852.1;Name=MCE2618852.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000488661.1;locus_tag=LVR01_06245;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=MCE2618852.1;transl_table=11 JAJSBG010000018.1 Genbank gene 32643 33509 . + . ID=gene-LVR01_06250;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LVR01_06250 JAJSBG010000018.1 Protein Homology CDS 32643 33509 . + 0 ID=cds-MCE2618853.1;Parent=gene-LVR01_06250;Dbxref=NCBI_GP:MCE2618853.1;Name=MCE2618853.1;gbkey=CDS;gene=accD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173351.1;locus_tag=LVR01_06250;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=MCE2618853.1;transl_table=11 JAJSBG010000018.1 Genbank gene 33506 34273 . + . ID=gene-LVR01_06255;Name=LVR01_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06255 JAJSBG010000018.1 Protein Homology CDS 33506 34273 . + 0 ID=cds-MCE2618854.1;Parent=gene-LVR01_06255;Dbxref=NCBI_GP:MCE2618854.1;Name=MCE2618854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017399.1;locus_tag=LVR01_06255;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=MCE2618854.1;transl_table=11 JAJSBG010000018.1 Genbank gene 34387 34812 . - . ID=gene-LVR01_06260;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LVR01_06260 JAJSBG010000018.1 Protein Homology CDS 34387 34812 . - 0 ID=cds-MCE2618855.1;Parent=gene-LVR01_06260;Dbxref=NCBI_GP:MCE2618855.1;Name=MCE2618855.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203629.1;locus_tag=LVR01_06260;product=transcription antitermination factor NusB;protein_id=MCE2618855.1;transl_table=11 JAJSBG010000018.1 Genbank gene 34805 35194 . - . ID=gene-LVR01_06265;Name=LVR01_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06265 JAJSBG010000018.1 Protein Homology CDS 34805 35194 . - 0 ID=cds-MCE2618856.1;Parent=gene-LVR01_06265;Dbxref=NCBI_GP:MCE2618856.1;Name=MCE2618856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517858.1;locus_tag=LVR01_06265;product=Asp23/Gls24 family envelope stress response protein;protein_id=MCE2618856.1;transl_table=11 JAJSBG010000018.1 Genbank gene 35216 35776 . - . ID=gene-LVR01_06270;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LVR01_06270 JAJSBG010000018.1 Protein Homology CDS 35216 35776 . - 0 ID=cds-MCE2618857.1;Parent=gene-LVR01_06270;Dbxref=NCBI_GP:MCE2618857.1;Name=MCE2618857.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=LVR01_06270;product=elongation factor P;protein_id=MCE2618857.1;transl_table=11 JAJSBG010000018.1 Genbank gene 35907 37349 . - . ID=gene-LVR01_06275;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LVR01_06275 JAJSBG010000018.1 Protein Homology CDS 35907 37349 . - 0 ID=cds-MCE2618858.1;Parent=gene-LVR01_06275;Dbxref=NCBI_GP:MCE2618858.1;Name=MCE2618858.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946582.1;locus_tag=LVR01_06275;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=MCE2618858.1;transl_table=11 JAJSBG010000018.1 Genbank gene 37349 38815 . - . ID=gene-LVR01_06280;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LVR01_06280 JAJSBG010000018.1 Protein Homology CDS 37349 38815 . - 0 ID=cds-MCE2618859.1;Parent=gene-LVR01_06280;Dbxref=NCBI_GP:MCE2618859.1;Name=MCE2618859.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466749.1;locus_tag=LVR01_06280;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=MCE2618859.1;transl_table=11 JAJSBG010000018.1 Genbank gene 38815 39117 . - . ID=gene-LVR01_06285;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LVR01_06285 JAJSBG010000018.1 Protein Homology CDS 38815 39117 . - 0 ID=cds-MCE2618860.1;Parent=gene-LVR01_06285;Dbxref=NCBI_GP:MCE2618860.1;Name=MCE2618860.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147946.1;locus_tag=LVR01_06285;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=MCE2618860.1;transl_table=11 JAJSBG010000018.1 Genbank gene 39330 40874 . + . ID=gene-LVR01_06290;Name=LVR01_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06290 JAJSBG010000018.1 Protein Homology CDS 39330 40874 . + 0 ID=cds-MCE2618861.1;Parent=gene-LVR01_06290;Dbxref=NCBI_GP:MCE2618861.1;Name=MCE2618861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=LVR01_06290;product=peptide chain release factor 3;protein_id=MCE2618861.1;transl_table=11 JAJSBG010000018.1 Genbank gene 41572 41769 . + . ID=gene-LVR01_06295;Name=LVR01_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06295 JAJSBG010000018.1 Protein Homology CDS 41572 41769 . + 0 ID=cds-MCE2618862.1;Parent=gene-LVR01_06295;Dbxref=NCBI_GP:MCE2618862.1;Name=MCE2618862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808887.1;locus_tag=LVR01_06295;product=glycosyl transferase family 8;protein_id=MCE2618862.1;transl_table=11 JAJSBG010000018.1 Genbank gene 41880 42056 . + . ID=gene-LVR01_06300;Name=LVR01_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06300 JAJSBG010000018.1 Protein Homology CDS 41880 42056 . + 0 ID=cds-MCE2618863.1;Parent=gene-LVR01_06300;Dbxref=NCBI_GP:MCE2618863.1;Name=MCE2618863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013652.2;locus_tag=LVR01_06300;product=glycosyl transferase family 8;protein_id=MCE2618863.1;transl_table=11 JAJSBG010000018.1 Genbank pseudogene 42083 42223 . - . ID=gene-LVR01_06305;Name=LVR01_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06305;pseudo=true JAJSBG010000018.1 Protein Homology CDS 42083 42223 . - 0 ID=cds-LVR01_06305;Parent=gene-LVR01_06305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=LVR01_06305;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000019.1 1 39366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000019.1 Genbank region 1 39366 . + . ID=JAJSBG010000019.1:1..39366;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000019.1 Genbank gene 103 225 . - . ID=gene-LVR01_06310;Name=LVR01_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06310 JAJSBG010000019.1 GeneMarkS-2+ CDS 103 225 . - 0 ID=cds-MCE2618864.1;Parent=gene-LVR01_06310;Dbxref=NCBI_GP:MCE2618864.1;Name=MCE2618864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06310;product=chlorohydrolase;protein_id=MCE2618864.1;transl_table=11 JAJSBG010000019.1 Genbank gene 256 489 . + . ID=gene-LVR01_06315;Name=LVR01_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06315 JAJSBG010000019.1 Protein Homology CDS 256 489 . + 0 ID=cds-MCE2618865.1;Parent=gene-LVR01_06315;Dbxref=NCBI_GP:MCE2618865.1;Name=MCE2618865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006144975.1;locus_tag=LVR01_06315;product=DUF1858 domain-containing protein;protein_id=MCE2618865.1;transl_table=11 JAJSBG010000019.1 Genbank gene 489 1823 . + . ID=gene-LVR01_06320;Name=LVR01_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06320 JAJSBG010000019.1 Protein Homology CDS 489 1823 . + 0 ID=cds-MCE2618866.1;Parent=gene-LVR01_06320;Dbxref=NCBI_GP:MCE2618866.1;Name=MCE2618866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000752887.1;locus_tag=LVR01_06320;product=DUF438 domain-containing protein;protein_id=MCE2618866.1;transl_table=11 JAJSBG010000019.1 Genbank gene 1833 2087 . + . ID=gene-LVR01_06325;Name=LVR01_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06325 JAJSBG010000019.1 Protein Homology CDS 1833 2087 . + 0 ID=cds-MCE2618867.1;Parent=gene-LVR01_06325;Dbxref=NCBI_GP:MCE2618867.1;Name=MCE2618867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119704.1;locus_tag=LVR01_06325;product=DUF1912 family protein;protein_id=MCE2618867.1;transl_table=11 JAJSBG010000019.1 Genbank gene 2183 2578 . + . ID=gene-LVR01_06330;Name=LVR01_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06330 JAJSBG010000019.1 Protein Homology CDS 2183 2578 . + 0 ID=cds-MCE2618868.1;Parent=gene-LVR01_06330;Dbxref=NCBI_GP:MCE2618868.1;Name=MCE2618868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038635.1;locus_tag=LVR01_06330;product=helicase;protein_id=MCE2618868.1;transl_table=11 JAJSBG010000019.1 Genbank pseudogene 2861 3438 . + . ID=gene-LVR01_06335;Name=LVR01_06335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06335;pseudo=true JAJSBG010000019.1 Protein Homology CDS 2861 3438 . + 0 ID=cds-LVR01_06335;Parent=gene-LVR01_06335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813803.1;locus_tag=LVR01_06335;product=flavin reductase family protein;pseudo=true;transl_table=11 JAJSBG010000019.1 Genbank gene 3425 3985 . + . ID=gene-LVR01_06340;Name=LVR01_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06340 JAJSBG010000019.1 Protein Homology CDS 3425 3985 . + 0 ID=cds-MCE2618869.1;Parent=gene-LVR01_06340;Dbxref=NCBI_GP:MCE2618869.1;Name=MCE2618869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196170.1;locus_tag=LVR01_06340;product=GNAT family N-acetyltransferase;protein_id=MCE2618869.1;transl_table=11 JAJSBG010000019.1 Genbank gene 3985 4563 . + . ID=gene-LVR01_06345;Name=LVR01_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06345 JAJSBG010000019.1 Protein Homology CDS 3985 4563 . + 0 ID=cds-MCE2618870.1;Parent=gene-LVR01_06345;Dbxref=NCBI_GP:MCE2618870.1;Name=MCE2618870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550018.1;locus_tag=LVR01_06345;product=AAA family ATPase;protein_id=MCE2618870.1;transl_table=11 JAJSBG010000019.1 Genbank gene 4860 5057 . + . ID=gene-LVR01_06350;Name=LVR01_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06350 JAJSBG010000019.1 GeneMarkS-2+ CDS 4860 5057 . + 0 ID=cds-MCE2618871.1;Parent=gene-LVR01_06350;Dbxref=NCBI_GP:MCE2618871.1;Name=MCE2618871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06350;product=hypothetical protein;protein_id=MCE2618871.1;transl_table=11 JAJSBG010000019.1 Genbank gene 5088 5243 . + . ID=gene-LVR01_06355;Name=LVR01_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06355 JAJSBG010000019.1 Protein Homology CDS 5088 5243 . + 0 ID=cds-MCE2618872.1;Parent=gene-LVR01_06355;Dbxref=NCBI_GP:MCE2618872.1;Name=MCE2618872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237269.1;locus_tag=LVR01_06355;product=hypothetical protein;protein_id=MCE2618872.1;transl_table=11 JAJSBG010000019.1 Genbank gene 5249 6481 . + . ID=gene-LVR01_06360;Name=LVR01_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06360 JAJSBG010000019.1 Protein Homology CDS 5249 6481 . + 0 ID=cds-MCE2618873.1;Parent=gene-LVR01_06360;Dbxref=NCBI_GP:MCE2618873.1;Name=MCE2618873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237271.1;locus_tag=LVR01_06360;product=beta-carotene 15%2C15'-monooxygenase;protein_id=MCE2618873.1;transl_table=11 JAJSBG010000019.1 Genbank gene 6875 8020 . + . ID=gene-LVR01_06365;Name=LVR01_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06365 JAJSBG010000019.1 GeneMarkS-2+ CDS 6875 8020 . + 0 ID=cds-MCE2618874.1;Parent=gene-LVR01_06365;Dbxref=NCBI_GP:MCE2618874.1;Name=MCE2618874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06365;product=hypothetical protein;protein_id=MCE2618874.1;transl_table=11 JAJSBG010000019.1 Genbank gene 8052 9053 . + . ID=gene-LVR01_06370;Name=LVR01_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06370 JAJSBG010000019.1 Protein Homology CDS 8052 9053 . + 0 ID=cds-MCE2618875.1;Parent=gene-LVR01_06370;Dbxref=NCBI_GP:MCE2618875.1;Name=MCE2618875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147018.1;locus_tag=LVR01_06370;product=virulence RhuM family protein;protein_id=MCE2618875.1;transl_table=11 JAJSBG010000019.1 Genbank gene 9180 11831 . + . ID=gene-LVR01_06375;Name=LVR01_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06375 JAJSBG010000019.1 Protein Homology CDS 9180 11831 . + 0 ID=cds-MCE2618876.1;Parent=gene-LVR01_06375;Dbxref=NCBI_GP:MCE2618876.1;Name=MCE2618876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732359.1;locus_tag=LVR01_06375;product=valine--tRNA ligase;protein_id=MCE2618876.1;transl_table=11 JAJSBG010000019.1 Genbank gene 11938 13281 . + . ID=gene-LVR01_06380;Name=LVR01_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06380 JAJSBG010000019.1 Protein Homology CDS 11938 13281 . + 0 ID=cds-MCE2618877.1;Parent=gene-LVR01_06380;Dbxref=NCBI_GP:MCE2618877.1;Name=MCE2618877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778677.1;locus_tag=LVR01_06380;product=ATP-binding protein;protein_id=MCE2618877.1;transl_table=11 JAJSBG010000019.1 Genbank gene 13271 13837 . + . ID=gene-LVR01_06385;Name=LVR01_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06385 JAJSBG010000019.1 Protein Homology CDS 13271 13837 . + 0 ID=cds-MCE2618878.1;Parent=gene-LVR01_06385;Dbxref=NCBI_GP:MCE2618878.1;Name=MCE2618878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253751.1;locus_tag=LVR01_06385;product=hypothetical protein;protein_id=MCE2618878.1;transl_table=11 JAJSBG010000019.1 Genbank gene 14194 14997 . + . ID=gene-LVR01_06390;Name=LVR01_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06390 JAJSBG010000019.1 Protein Homology CDS 14194 14997 . + 0 ID=cds-MCE2618879.1;Parent=gene-LVR01_06390;Dbxref=NCBI_GP:MCE2618879.1;Name=MCE2618879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866401.1;locus_tag=LVR01_06390;product=Fic/DOC family protein;protein_id=MCE2618879.1;transl_table=11 JAJSBG010000019.1 Genbank gene 15269 17947 . + . ID=gene-LVR01_06395;Name=LVR01_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06395 JAJSBG010000019.1 Protein Homology CDS 15269 17947 . + 0 ID=cds-MCE2618880.1;Parent=gene-LVR01_06395;Dbxref=NCBI_GP:MCE2618880.1;Name=MCE2618880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268095.1;locus_tag=LVR01_06395;product=DEAD/DEAH box helicase family protein;protein_id=MCE2618880.1;transl_table=11 JAJSBG010000019.1 Genbank gene 18314 19360 . + . ID=gene-LVR01_06400;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LVR01_06400 JAJSBG010000019.1 Protein Homology CDS 18314 19360 . + 0 ID=cds-MCE2618881.1;Parent=gene-LVR01_06400;Dbxref=NCBI_GP:MCE2618881.1;Name=MCE2618881.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903845.1;locus_tag=LVR01_06400;product=phenylalanine--tRNA ligase subunit alpha;protein_id=MCE2618881.1;transl_table=11 JAJSBG010000019.1 Genbank gene 19360 19869 . + . ID=gene-LVR01_06405;Name=LVR01_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06405 JAJSBG010000019.1 Protein Homology CDS 19360 19869 . + 0 ID=cds-MCE2618882.1;Parent=gene-LVR01_06405;Dbxref=NCBI_GP:MCE2618882.1;Name=MCE2618882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000619935.1;locus_tag=LVR01_06405;product=GNAT family N-acetyltransferase;protein_id=MCE2618882.1;transl_table=11 JAJSBG010000019.1 Genbank gene 19946 22351 . + . ID=gene-LVR01_06410;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LVR01_06410 JAJSBG010000019.1 Protein Homology CDS 19946 22351 . + 0 ID=cds-MCE2618883.1;Parent=gene-LVR01_06410;Dbxref=NCBI_GP:MCE2618883.1;Name=MCE2618883.1;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897790.1;locus_tag=LVR01_06410;product=phenylalanine--tRNA ligase subunit beta;protein_id=MCE2618883.1;transl_table=11 JAJSBG010000019.1 Genbank gene 22573 23574 . - . ID=gene-LVR01_06415;Name=LVR01_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06415 JAJSBG010000019.1 Protein Homology CDS 22573 23574 . - 0 ID=cds-MCE2618884.1;Parent=gene-LVR01_06415;Dbxref=NCBI_GP:MCE2618884.1;Name=MCE2618884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000597989.1;locus_tag=LVR01_06415;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MCE2618884.1;transl_table=11 JAJSBG010000019.1 Genbank pseudogene 23731 24216 . + . ID=gene-LVR01_06420;Name=LVR01_06420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06420;pseudo=true JAJSBG010000019.1 Protein Homology CDS 23731 24216 . + 0 ID=cds-LVR01_06420;Parent=gene-LVR01_06420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_06420;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000019.1 Genbank gene 24275 24568 . + . ID=gene-LVR01_06425;Name=LVR01_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06425 JAJSBG010000019.1 Protein Homology CDS 24275 24568 . + 0 ID=cds-MCE2618885.1;Parent=gene-LVR01_06425;Dbxref=NCBI_GP:MCE2618885.1;Name=MCE2618885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797743.1;locus_tag=LVR01_06425;product=helix-turn-helix transcriptional regulator;protein_id=MCE2618885.1;transl_table=11 JAJSBG010000019.1 Genbank gene 24589 24705 . + . ID=gene-LVR01_06430;Name=LVR01_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06430 JAJSBG010000019.1 Protein Homology CDS 24589 24705 . + 0 ID=cds-MCE2618886.1;Parent=gene-LVR01_06430;Dbxref=NCBI_GP:MCE2618886.1;Name=MCE2618886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_06430;product=chlorohydrolase;protein_id=MCE2618886.1;transl_table=11 JAJSBG010000019.1 Genbank gene 24984 27233 . + . ID=gene-LVR01_06435;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LVR01_06435 JAJSBG010000019.1 Protein Homology CDS 24984 27233 . + 0 ID=cds-MCE2618887.1;Parent=gene-LVR01_06435;Dbxref=NCBI_GP:MCE2618887.1;Name=MCE2618887.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729869.1;locus_tag=LVR01_06435;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=MCE2618887.1;transl_table=11 JAJSBG010000019.1 Genbank gene 27336 28202 . + . ID=gene-LVR01_06440;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LVR01_06440 JAJSBG010000019.1 Protein Homology CDS 27336 28202 . + 0 ID=cds-MCE2618888.1;Parent=gene-LVR01_06440;Dbxref=NCBI_GP:MCE2618888.1;Name=MCE2618888.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089969.1;locus_tag=LVR01_06440;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=MCE2618888.1;transl_table=11 JAJSBG010000019.1 Genbank gene 28929 31142 . + . ID=gene-LVR01_06445;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LVR01_06445 JAJSBG010000019.1 Protein Homology CDS 28929 31142 . + 0 ID=cds-MCE2618889.1;Parent=gene-LVR01_06445;Dbxref=NCBI_GP:MCE2618889.1;Name=MCE2618889.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854499.1;locus_tag=LVR01_06445;product=polyribonucleotide nucleotidyltransferase;protein_id=MCE2618889.1;transl_table=11 JAJSBG010000019.1 Genbank gene 31158 31775 . + . ID=gene-LVR01_06450;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LVR01_06450 JAJSBG010000019.1 Protein Homology CDS 31158 31775 . + 0 ID=cds-MCE2618890.1;Parent=gene-LVR01_06450;Dbxref=NCBI_GP:MCE2618890.1;Name=MCE2618890.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539958.1;locus_tag=LVR01_06450;product=serine O-acetyltransferase;protein_id=MCE2618890.1;transl_table=11 JAJSBG010000019.1 Genbank gene 31787 32671 . + . ID=gene-LVR01_06455;Name=LVR01_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06455 JAJSBG010000019.1 Protein Homology CDS 31787 32671 . + 0 ID=cds-MCE2618891.1;Parent=gene-LVR01_06455;Dbxref=NCBI_GP:MCE2618891.1;Name=MCE2618891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613615.1;locus_tag=LVR01_06455;product=GNAT family N-acetyltransferase;protein_id=MCE2618891.1;transl_table=11 JAJSBG010000019.1 Genbank gene 32753 34096 . + . ID=gene-LVR01_06460;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LVR01_06460 JAJSBG010000019.1 Protein Homology CDS 32753 34096 . + 0 ID=cds-MCE2618892.1;Parent=gene-LVR01_06460;Dbxref=NCBI_GP:MCE2618892.1;Name=MCE2618892.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916477.1;locus_tag=LVR01_06460;product=cysteine--tRNA ligase;protein_id=MCE2618892.1;transl_table=11 JAJSBG010000019.1 Genbank gene 34089 34475 . + . ID=gene-LVR01_06465;Name=LVR01_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06465 JAJSBG010000019.1 Protein Homology CDS 34089 34475 . + 0 ID=cds-MCE2618893.1;Parent=gene-LVR01_06465;Dbxref=NCBI_GP:MCE2618893.1;Name=MCE2618893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148900.1;locus_tag=LVR01_06465;product=Mini-ribonuclease 3;protein_id=MCE2618893.1;transl_table=11 JAJSBG010000019.1 Genbank gene 34479 35363 . + . ID=gene-LVR01_06470;Name=LVR01_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06470 JAJSBG010000019.1 Protein Homology CDS 34479 35363 . + 0 ID=cds-MCE2618894.1;Parent=gene-LVR01_06470;Dbxref=NCBI_GP:MCE2618894.1;Name=MCE2618894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844585.1;locus_tag=LVR01_06470;product=PucR family transcriptional regulator;protein_id=MCE2618894.1;transl_table=11 JAJSBG010000019.1 Genbank pseudogene 35490 35689 . - . ID=gene-LVR01_06475;Name=LVR01_06475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06475;pseudo=true JAJSBG010000019.1 Protein Homology CDS 35490 35689 . - 0 ID=cds-LVR01_06475;Parent=gene-LVR01_06475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=LVR01_06475;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000019.1 Genbank pseudogene 35945 36746 . + . ID=gene-LVR01_06480;Name=LVR01_06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06480;pseudo=true JAJSBG010000019.1 Protein Homology CDS 35945 36746 . + 0 ID=cds-LVR01_06480;Parent=gene-LVR01_06480;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_06480;product=IS5 family transposase;pseudo=true;transl_table=11 JAJSBG010000019.1 Genbank pseudogene 36875 37298 . + . ID=gene-LVR01_06485;Name=LVR01_06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06485;pseudo=true JAJSBG010000019.1 Protein Homology CDS 36875 37298 . + 0 ID=cds-LVR01_06485;Parent=gene-LVR01_06485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186956.1;locus_tag=LVR01_06485;product=DUF4231 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000019.1 Genbank gene 37760 37897 . + . ID=gene-LVR01_06490;Name=LVR01_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06490 JAJSBG010000019.1 GeneMarkS-2+ CDS 37760 37897 . + 0 ID=cds-MCE2618895.1;Parent=gene-LVR01_06490;Dbxref=NCBI_GP:MCE2618895.1;Name=MCE2618895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06490;product=hypothetical protein;protein_id=MCE2618895.1;transl_table=11 JAJSBG010000019.1 Genbank gene 37977 39366 . + . ID=gene-LVR01_06495;Name=LVR01_06495;end_range=39366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06495;partial=true JAJSBG010000019.1 Protein Homology CDS 37977 39366 . + 0 ID=cds-MCE2618896.1;Parent=gene-LVR01_06495;Dbxref=NCBI_GP:MCE2618896.1;Name=MCE2618896.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;end_range=39366,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=LVR01_06495;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2618896.1;transl_table=11 ##sequence-region JAJSBG010000001.1 1 230040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000001.1 Genbank region 1 230040 . + . ID=JAJSBG010000001.1:1..230040;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000001.1 Genbank gene 325 513 . + . ID=gene-LVR01_00005;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LVR01_00005 JAJSBG010000001.1 Protein Homology CDS 325 513 . + 0 ID=cds-MCE2617703.1;Parent=gene-LVR01_00005;Dbxref=NCBI_GP:MCE2617703.1;Name=MCE2617703.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=LVR01_00005;product=50S ribosomal protein L28;protein_id=MCE2617703.1;transl_table=11 JAJSBG010000001.1 Genbank gene 668 1033 . + . ID=gene-LVR01_00010;Name=LVR01_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00010 JAJSBG010000001.1 Protein Homology CDS 668 1033 . + 0 ID=cds-MCE2617704.1;Parent=gene-LVR01_00010;Dbxref=NCBI_GP:MCE2617704.1;Name=MCE2617704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=LVR01_00010;product=Asp23/Gls24 family envelope stress response protein;protein_id=MCE2617704.1;transl_table=11 JAJSBG010000001.1 Genbank gene 1036 2703 . + . ID=gene-LVR01_00015;Name=LVR01_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00015 JAJSBG010000001.1 Protein Homology CDS 1036 2703 . + 0 ID=cds-MCE2617705.1;Parent=gene-LVR01_00015;Dbxref=NCBI_GP:MCE2617705.1;Name=MCE2617705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036655.1;locus_tag=LVR01_00015;product=DAK2 domain-containing protein;protein_id=MCE2617705.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 2909 4610 . + . ID=gene-LVR01_00020;Name=LVR01_00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00020;pseudo=true JAJSBG010000001.1 Protein Homology CDS 2909 4610 . + 0 ID=cds-LVR01_00020;Parent=gene-LVR01_00020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411733.1;locus_tag=LVR01_00020;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 4603 5079 . + . ID=gene-LVR01_00025;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LVR01_00025 JAJSBG010000001.1 Protein Homology CDS 4603 5079 . + 0 ID=cds-MCE2617706.1;Parent=gene-LVR01_00025;Dbxref=NCBI_GP:MCE2617706.1;Name=MCE2617706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=LVR01_00025;product=acetolactate synthase small subunit;protein_id=MCE2617706.1;transl_table=11 JAJSBG010000001.1 Genbank gene 5145 6167 . + . ID=gene-LVR01_00030;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LVR01_00030 JAJSBG010000001.1 Protein Homology CDS 5145 6167 . + 0 ID=cds-MCE2617707.1;Parent=gene-LVR01_00030;Dbxref=NCBI_GP:MCE2617707.1;Name=MCE2617707.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145054.1;locus_tag=LVR01_00030;product=ketol-acid reductoisomerase;protein_id=MCE2617707.1;transl_table=11 JAJSBG010000001.1 Genbank gene 6252 6608 . + . ID=gene-LVR01_00035;Name=LVR01_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00035 JAJSBG010000001.1 Protein Homology CDS 6252 6608 . + 0 ID=cds-MCE2617708.1;Parent=gene-LVR01_00035;Dbxref=NCBI_GP:MCE2617708.1;Name=MCE2617708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027901.1;locus_tag=LVR01_00035;product=ketol-acid reductoisomerase;protein_id=MCE2617708.1;transl_table=11 JAJSBG010000001.1 Genbank gene 6659 7909 . + . ID=gene-LVR01_00040;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LVR01_00040 JAJSBG010000001.1 Protein Homology CDS 6659 7909 . + 0 ID=cds-MCE2617709.1;Parent=gene-LVR01_00040;Dbxref=NCBI_GP:MCE2617709.1;Name=MCE2617709.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006151817.1;locus_tag=LVR01_00040;product=threonine ammonia-lyase IlvA;protein_id=MCE2617709.1;transl_table=11 JAJSBG010000001.1 Genbank gene 8739 8954 . + . ID=gene-LVR01_00045;Name=LVR01_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00045 JAJSBG010000001.1 Protein Homology CDS 8739 8954 . + 0 ID=cds-MCE2617710.1;Parent=gene-LVR01_00045;Dbxref=NCBI_GP:MCE2617710.1;Name=MCE2617710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893653.1;locus_tag=LVR01_00045;product=hypothetical protein;protein_id=MCE2617710.1;transl_table=11 JAJSBG010000001.1 Genbank gene 9063 9803 . - . ID=gene-LVR01_00050;Name=LVR01_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00050 JAJSBG010000001.1 Protein Homology CDS 9063 9803 . - 0 ID=cds-MCE2617711.1;Parent=gene-LVR01_00050;Dbxref=NCBI_GP:MCE2617711.1;Name=MCE2617711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189492.1;locus_tag=LVR01_00050;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2617711.1;transl_table=11 JAJSBG010000001.1 Genbank gene 9803 11368 . - . ID=gene-LVR01_00055;Name=LVR01_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00055 JAJSBG010000001.1 Protein Homology CDS 9803 11368 . - 0 ID=cds-MCE2617712.1;Parent=gene-LVR01_00055;Dbxref=NCBI_GP:MCE2617712.1;Name=MCE2617712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227294.1;locus_tag=LVR01_00055;product=ABC transporter substrate-binding protein/permease;protein_id=MCE2617712.1;transl_table=11 JAJSBG010000001.1 Genbank gene 11506 13395 . + . ID=gene-LVR01_00060;Name=LVR01_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00060 JAJSBG010000001.1 Protein Homology CDS 11506 13395 . + 0 ID=cds-MCE2617713.1;Parent=gene-LVR01_00060;Dbxref=NCBI_GP:MCE2617713.1;Name=MCE2617713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750662.1;locus_tag=LVR01_00060;product=DUF2207 domain-containing protein;protein_id=MCE2617713.1;transl_table=11 JAJSBG010000001.1 Genbank gene 13455 14300 . + . ID=gene-LVR01_00065;Name=LVR01_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00065 JAJSBG010000001.1 Protein Homology CDS 13455 14300 . + 0 ID=cds-MCE2617714.1;Parent=gene-LVR01_00065;Dbxref=NCBI_GP:MCE2617714.1;Name=MCE2617714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273482.1;locus_tag=LVR01_00065;product=undecaprenyl-diphosphate phosphatase;protein_id=MCE2617714.1;transl_table=11 JAJSBG010000001.1 Genbank gene 14447 15508 . - . ID=gene-LVR01_00070;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LVR01_00070 JAJSBG010000001.1 Protein Homology CDS 14447 15508 . - 0 ID=cds-MCE2617715.1;Parent=gene-LVR01_00070;Dbxref=NCBI_GP:MCE2617715.1;Name=MCE2617715.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904550.1;locus_tag=LVR01_00070;product=DNA polymerase IV;protein_id=MCE2617715.1;transl_table=11 JAJSBG010000001.1 Genbank gene 15747 18071 . + . ID=gene-LVR01_00075;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LVR01_00075 JAJSBG010000001.1 Protein Homology CDS 15747 18071 . + 0 ID=cds-MCE2617716.1;Parent=gene-LVR01_00075;Dbxref=NCBI_GP:MCE2617716.1;Name=MCE2617716.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399021.1;locus_tag=LVR01_00075;product=formate C-acetyltransferase;protein_id=MCE2617716.1;transl_table=11 JAJSBG010000001.1 Genbank gene 18511 20238 . - . ID=gene-LVR01_00080;Name=LVR01_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00080 JAJSBG010000001.1 Protein Homology CDS 18511 20238 . - 0 ID=cds-MCE2617717.1;Parent=gene-LVR01_00080;Dbxref=NCBI_GP:MCE2617717.1;Name=MCE2617717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142808.1;locus_tag=LVR01_00080;product=IS1634 family transposase;protein_id=MCE2617717.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 20540 21727 . - . ID=gene-LVR01_00085;Name=LVR01_00085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00085;pseudo=true JAJSBG010000001.1 Protein Homology CDS 20540 21727 . - 0 ID=cds-LVR01_00085;Parent=gene-LVR01_00085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519662.1;locus_tag=LVR01_00085;product=TrkH family potassium uptake protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 21731 23080 . - . ID=gene-LVR01_00090;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=LVR01_00090 JAJSBG010000001.1 Protein Homology CDS 21731 23080 . - 0 ID=cds-MCE2617718.1;Parent=gene-LVR01_00090;Dbxref=NCBI_GP:MCE2617718.1;Name=MCE2617718.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691677.1;locus_tag=LVR01_00090;product=Trk system potassium transporter TrkA;protein_id=MCE2617718.1;transl_table=11 JAJSBG010000001.1 Genbank gene 23268 24116 . + . ID=gene-LVR01_00095;Name=LVR01_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00095 JAJSBG010000001.1 Protein Homology CDS 23268 24116 . + 0 ID=cds-MCE2617719.1;Parent=gene-LVR01_00095;Dbxref=NCBI_GP:MCE2617719.1;Name=MCE2617719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018292.1;locus_tag=LVR01_00095;product=S-adenosyl-l-methionine hydroxide adenosyltransferase family protein;protein_id=MCE2617719.1;transl_table=11 JAJSBG010000001.1 Genbank gene 24132 24677 . + . ID=gene-LVR01_00100;Name=LVR01_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00100 JAJSBG010000001.1 Protein Homology CDS 24132 24677 . + 0 ID=cds-MCE2617720.1;Parent=gene-LVR01_00100;Dbxref=NCBI_GP:MCE2617720.1;Name=MCE2617720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403170.1;locus_tag=LVR01_00100;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=MCE2617720.1;transl_table=11 JAJSBG010000001.1 Genbank gene 25075 26757 . + . ID=gene-LVR01_00105;Name=LVR01_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00105 JAJSBG010000001.1 Protein Homology CDS 25075 26757 . + 0 ID=cds-MCE2617721.1;Parent=gene-LVR01_00105;Dbxref=NCBI_GP:MCE2617721.1;Name=MCE2617721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656554.1;locus_tag=LVR01_00105;product=ABC transporter ATP-binding protein;protein_id=MCE2617721.1;transl_table=11 JAJSBG010000001.1 Genbank gene 26742 27572 . + . ID=gene-LVR01_00110;Name=LVR01_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00110 JAJSBG010000001.1 Protein Homology CDS 26742 27572 . + 0 ID=cds-MCE2617722.1;Parent=gene-LVR01_00110;Dbxref=NCBI_GP:MCE2617722.1;Name=MCE2617722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260602.1;locus_tag=LVR01_00110;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCE2617722.1;transl_table=11 JAJSBG010000001.1 Genbank gene 27765 28268 . + . ID=gene-LVR01_00115;Name=LVR01_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00115 JAJSBG010000001.1 Protein Homology CDS 27765 28268 . + 0 ID=cds-MCE2617723.1;Parent=gene-LVR01_00115;Dbxref=NCBI_GP:MCE2617723.1;Name=MCE2617723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181367.1;locus_tag=LVR01_00115;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=MCE2617723.1;transl_table=11 JAJSBG010000001.1 cmsearch riboswitch 28334 28552 . + . ID=id-JAJSBG010000001.1:28334..28552;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000001.1 Genbank gene 28716 29279 . + . ID=gene-LVR01_00120;Name=LVR01_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00120 JAJSBG010000001.1 Protein Homology CDS 28716 29279 . + 0 ID=cds-MCE2617724.1;Parent=gene-LVR01_00120;Dbxref=NCBI_GP:MCE2617724.1;Name=MCE2617724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260607.1;locus_tag=LVR01_00120;product=ECF transporter S component;protein_id=MCE2617724.1;transl_table=11 JAJSBG010000001.1 Genbank gene 29269 29919 . + . ID=gene-LVR01_00125;Name=LVR01_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00125 JAJSBG010000001.1 Protein Homology CDS 29269 29919 . + 0 ID=cds-MCE2617725.1;Parent=gene-LVR01_00125;Dbxref=NCBI_GP:MCE2617725.1;Name=MCE2617725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466738.1;locus_tag=LVR01_00125;product=phosphatase PAP2 family protein;protein_id=MCE2617725.1;transl_table=11 JAJSBG010000001.1 Genbank gene 30031 30903 . + . ID=gene-LVR01_00130;Name=LVR01_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00130 JAJSBG010000001.1 Protein Homology CDS 30031 30903 . + 0 ID=cds-MCE2617726.1;Parent=gene-LVR01_00130;Dbxref=NCBI_GP:MCE2617726.1;Name=MCE2617726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525616.1;locus_tag=LVR01_00130;product=helix-turn-helix domain-containing protein;protein_id=MCE2617726.1;transl_table=11 JAJSBG010000001.1 Genbank gene 31103 32323 . + . ID=gene-LVR01_00135;Name=LVR01_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00135 JAJSBG010000001.1 Protein Homology CDS 31103 32323 . + 0 ID=cds-MCE2617727.1;Parent=gene-LVR01_00135;Dbxref=NCBI_GP:MCE2617727.1;Name=MCE2617727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091364.1;locus_tag=LVR01_00135;product=hypothetical protein;protein_id=MCE2617727.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 32343 32477 . + . ID=gene-LVR01_00140;Name=LVR01_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00140;pseudo=true JAJSBG010000001.1 Protein Homology CDS 32343 32477 . + 0 ID=cds-LVR01_00140;Parent=gene-LVR01_00140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001853067.1;locus_tag=LVR01_00140;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 32505 32924 . + . ID=gene-LVR01_00145;Name=LVR01_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00145 JAJSBG010000001.1 Protein Homology CDS 32505 32924 . + 0 ID=cds-MCE2617728.1;Parent=gene-LVR01_00145;Dbxref=NCBI_GP:MCE2617728.1;Name=MCE2617728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868606.1;locus_tag=LVR01_00145;product=chromosome partitioning protein ParB;protein_id=MCE2617728.1;transl_table=11 JAJSBG010000001.1 Genbank gene 32929 33378 . + . ID=gene-LVR01_00150;Name=LVR01_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00150 JAJSBG010000001.1 Protein Homology CDS 32929 33378 . + 0 ID=cds-MCE2617729.1;Parent=gene-LVR01_00150;Dbxref=NCBI_GP:MCE2617729.1;Name=MCE2617729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000333655.1;locus_tag=LVR01_00150;product=GNAT family N-acetyltransferase;protein_id=MCE2617729.1;transl_table=11 JAJSBG010000001.1 Genbank gene 33506 34093 . + . ID=gene-LVR01_00155;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LVR01_00155 JAJSBG010000001.1 Protein Homology CDS 33506 34093 . + 0 ID=cds-MCE2617730.1;Parent=gene-LVR01_00155;Dbxref=NCBI_GP:MCE2617730.1;Name=MCE2617730.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418402.1;locus_tag=LVR01_00155;product=DNA-directed RNA polymerase subunit delta;protein_id=MCE2617730.1;transl_table=11 JAJSBG010000001.1 Genbank gene 34330 35937 . + . ID=gene-LVR01_00160;Name=LVR01_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00160 JAJSBG010000001.1 Protein Homology CDS 34330 35937 . + 0 ID=cds-MCE2617731.1;Parent=gene-LVR01_00160;Dbxref=NCBI_GP:MCE2617731.1;Name=MCE2617731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105234.1;locus_tag=LVR01_00160;product=CTP synthase;protein_id=MCE2617731.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 36496 38127 . - . ID=gene-LVR01_00165;Name=LVR01_00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00165;pseudo=true JAJSBG010000001.1 Protein Homology CDS 36496 38127 . - 0 ID=cds-LVR01_00165;Parent=gene-LVR01_00165;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251733.1;locus_tag=LVR01_00165;product=Na/Pi cotransporter family protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 38425 43440 . + . ID=gene-LVR01_00170;Name=LVR01_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00170 JAJSBG010000001.1 Protein Homology CDS 38425 43440 . + 0 ID=cds-MCE2617732.1;Parent=gene-LVR01_00170;Dbxref=NCBI_GP:MCE2617732.1;Name=MCE2617732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795197.1;locus_tag=LVR01_00170;product=bacterial Ig-like domain-containing protein;protein_id=MCE2617732.1;transl_table=11 JAJSBG010000001.1 Genbank gene 43530 44726 . + . ID=gene-LVR01_00175;Name=LVR01_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00175 JAJSBG010000001.1 Protein Homology CDS 43530 44726 . + 0 ID=cds-MCE2617733.1;Parent=gene-LVR01_00175;Dbxref=NCBI_GP:MCE2617733.1;Name=MCE2617733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=LVR01_00175;product=phosphoglycerate kinase;protein_id=MCE2617733.1;transl_table=11 JAJSBG010000001.1 Genbank gene 45049 45576 . + . ID=gene-LVR01_00180;Name=LVR01_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00180 JAJSBG010000001.1 Protein Homology CDS 45049 45576 . + 0 ID=cds-MCE2617734.1;Parent=gene-LVR01_00180;Dbxref=NCBI_GP:MCE2617734.1;Name=MCE2617734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119911.1;locus_tag=LVR01_00180;product=aromatic acid exporter family protein;protein_id=MCE2617734.1;transl_table=11 JAJSBG010000001.1 Genbank gene 45653 46009 . + . ID=gene-LVR01_00185;Name=glnR;gbkey=Gene;gene=glnR;gene_biotype=protein_coding;locus_tag=LVR01_00185 JAJSBG010000001.1 Protein Homology CDS 45653 46009 . + 0 ID=cds-MCE2617735.1;Parent=gene-LVR01_00185;Dbxref=NCBI_GP:MCE2617735.1;Name=MCE2617735.1;gbkey=CDS;gene=glnR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659547.1;locus_tag=LVR01_00185;product=transcriptional repressor GlnR;protein_id=MCE2617735.1;transl_table=11 JAJSBG010000001.1 Genbank gene 46047 47393 . + . ID=gene-LVR01_00190;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LVR01_00190 JAJSBG010000001.1 Protein Homology CDS 46047 47393 . + 0 ID=cds-MCE2617736.1;Parent=gene-LVR01_00190;Dbxref=NCBI_GP:MCE2617736.1;Name=MCE2617736.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808235.1;locus_tag=LVR01_00190;product=type I glutamate--ammonia ligase;protein_id=MCE2617736.1;transl_table=11 JAJSBG010000001.1 Genbank gene 47489 47608 . - . ID=gene-LVR01_00195;Name=LVR01_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00195 JAJSBG010000001.1 Protein Homology CDS 47489 47608 . - 0 ID=cds-MCE2617737.1;Parent=gene-LVR01_00195;Dbxref=NCBI_GP:MCE2617737.1;Name=MCE2617737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808898.1;locus_tag=LVR01_00195;product=glutamine synthetase;protein_id=MCE2617737.1;transl_table=11 JAJSBG010000001.1 Genbank gene 47573 47722 . + . ID=gene-LVR01_00200;Name=LVR01_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00200 JAJSBG010000001.1 Protein Homology CDS 47573 47722 . + 0 ID=cds-MCE2617738.1;Parent=gene-LVR01_00200;Dbxref=NCBI_GP:MCE2617738.1;Name=MCE2617738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410533.1;locus_tag=LVR01_00200;product=cell envelope;protein_id=MCE2617738.1;transl_table=11 JAJSBG010000001.1 Genbank gene 48247 49428 . + . ID=gene-LVR01_00205;Name=LVR01_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00205 JAJSBG010000001.1 Protein Homology CDS 48247 49428 . + 0 ID=cds-MCE2617739.1;Parent=gene-LVR01_00205;Dbxref=NCBI_GP:MCE2617739.1;Name=MCE2617739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LVR01_00205;product=restriction endonuclease subunit S;protein_id=MCE2617739.1;transl_table=11 JAJSBG010000001.1 Genbank gene 49388 49975 . - . ID=gene-LVR01_00210;Name=LVR01_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00210 JAJSBG010000001.1 Protein Homology CDS 49388 49975 . - 0 ID=cds-MCE2617740.1;Parent=gene-LVR01_00210;Dbxref=NCBI_GP:MCE2617740.1;Name=MCE2617740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284928.1;locus_tag=LVR01_00210;product=restriction endonuclease subunit S;protein_id=MCE2617740.1;transl_table=11 JAJSBG010000001.1 Genbank gene 49962 50759 . - . ID=gene-LVR01_00215;Name=psrA;gbkey=Gene;gene=psrA;gene_biotype=protein_coding;locus_tag=LVR01_00215 JAJSBG010000001.1 Protein Homology CDS 49962 50759 . - 0 ID=cds-MCE2617741.1;Parent=gene-LVR01_00215;Dbxref=NCBI_GP:MCE2617741.1;Name=MCE2617741.1;gbkey=CDS;gene=psrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651177.1;locus_tag=LVR01_00215;product=tyrosine-type DNA invertase PsrA;protein_id=MCE2617741.1;transl_table=11 JAJSBG010000001.1 Genbank gene 50816 52384 . - . ID=gene-LVR01_00220;Name=LVR01_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00220 JAJSBG010000001.1 Protein Homology CDS 50816 52384 . - 0 ID=cds-MCE2617742.1;Parent=gene-LVR01_00220;Dbxref=NCBI_GP:MCE2617742.1;Name=MCE2617742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187211.1;locus_tag=LVR01_00220;product=restriction endonuclease subunit S;protein_id=MCE2617742.1;transl_table=11 JAJSBG010000001.1 Genbank gene 52384 53847 . - . ID=gene-LVR01_00225;Name=LVR01_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00225 JAJSBG010000001.1 Protein Homology CDS 52384 53847 . - 0 ID=cds-MCE2617743.1;Parent=gene-LVR01_00225;Dbxref=NCBI_GP:MCE2617743.1;Name=MCE2617743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029054.1;locus_tag=LVR01_00225;product=type I restriction-modification system subunit M;protein_id=MCE2617743.1;transl_table=11 JAJSBG010000001.1 Genbank gene 53860 56193 . - . ID=gene-LVR01_00230;Name=LVR01_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00230 JAJSBG010000001.1 Protein Homology CDS 53860 56193 . - 0 ID=cds-MCE2617744.1;Parent=gene-LVR01_00230;Dbxref=NCBI_GP:MCE2617744.1;Name=MCE2617744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399214.1;locus_tag=LVR01_00230;product=DEAD/DEAH box helicase family protein;protein_id=MCE2617744.1;transl_table=11 JAJSBG010000001.1 Genbank gene 56801 57313 . + . ID=gene-LVR01_00235;Name=LVR01_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00235 JAJSBG010000001.1 Protein Homology CDS 56801 57313 . + 0 ID=cds-MCE2617745.1;Parent=gene-LVR01_00235;Dbxref=NCBI_GP:MCE2617745.1;Name=MCE2617745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088710.1;locus_tag=LVR01_00235;product=DUF2812 domain-containing protein;protein_id=MCE2617745.1;transl_table=11 JAJSBG010000001.1 Genbank gene 57474 58508 . + . ID=gene-LVR01_00240;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LVR01_00240 JAJSBG010000001.1 Protein Homology CDS 57474 58508 . + 0 ID=cds-MCE2617746.1;Parent=gene-LVR01_00240;Dbxref=NCBI_GP:MCE2617746.1;Name=MCE2617746.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255779.1;locus_tag=LVR01_00240;product=heat-inducible transcriptional repressor HrcA;protein_id=MCE2617746.1;transl_table=11 JAJSBG010000001.1 Genbank gene 58535 59059 . + . ID=gene-LVR01_00245;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LVR01_00245 JAJSBG010000001.1 Protein Homology CDS 58535 59059 . + 0 ID=cds-MCE2617747.1;Parent=gene-LVR01_00245;Dbxref=NCBI_GP:MCE2617747.1;Name=MCE2617747.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046028.1;locus_tag=LVR01_00245;product=nucleotide exchange factor GrpE;protein_id=MCE2617747.1;transl_table=11 JAJSBG010000001.1 Genbank gene 59535 61358 . + . ID=gene-LVR01_00250;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LVR01_00250 JAJSBG010000001.1 Protein Homology CDS 59535 61358 . + 0 ID=cds-MCE2617748.1;Parent=gene-LVR01_00250;Dbxref=NCBI_GP:MCE2617748.1;Name=MCE2617748.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=LVR01_00250;product=molecular chaperone DnaK;protein_id=MCE2617748.1;transl_table=11 JAJSBG010000001.1 Genbank gene 61360 61761 . + . ID=gene-LVR01_00255;Name=LVR01_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00255 JAJSBG010000001.1 Protein Homology CDS 61360 61761 . + 0 ID=cds-MCE2617749.1;Parent=gene-LVR01_00255;Dbxref=NCBI_GP:MCE2617749.1;Name=MCE2617749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114360.1;locus_tag=LVR01_00255;product=tRNA (guanine-N7)-methyltransferase;protein_id=MCE2617749.1;transl_table=11 JAJSBG010000001.1 Genbank gene 62040 63179 . + . ID=gene-LVR01_00260;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LVR01_00260 JAJSBG010000001.1 Protein Homology CDS 62040 63179 . + 0 ID=cds-MCE2617750.1;Parent=gene-LVR01_00260;Dbxref=NCBI_GP:MCE2617750.1;Name=MCE2617750.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066288.1;locus_tag=LVR01_00260;product=molecular chaperone DnaJ;protein_id=MCE2617750.1;transl_table=11 JAJSBG010000001.1 Genbank gene 63862 64149 . - . ID=gene-LVR01_00265;Name=LVR01_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00265 JAJSBG010000001.1 Protein Homology CDS 63862 64149 . - 0 ID=cds-MCE2617751.1;Parent=gene-LVR01_00265;Dbxref=NCBI_GP:MCE2617751.1;Name=MCE2617751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777751.1;locus_tag=LVR01_00265;product=hypothetical protein;protein_id=MCE2617751.1;transl_table=11 JAJSBG010000001.1 Genbank gene 64159 64569 . - . ID=gene-LVR01_00270;Name=LVR01_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00270 JAJSBG010000001.1 Protein Homology CDS 64159 64569 . - 0 ID=cds-MCE2617752.1;Parent=gene-LVR01_00270;Dbxref=NCBI_GP:MCE2617752.1;Name=MCE2617752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006150090.1;locus_tag=LVR01_00270;product=HIT family protein;protein_id=MCE2617752.1;transl_table=11 JAJSBG010000001.1 Genbank gene 64637 65368 . + . ID=gene-LVR01_00275;Name=LVR01_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00275 JAJSBG010000001.1 Protein Homology CDS 64637 65368 . + 0 ID=cds-MCE2617753.1;Parent=gene-LVR01_00275;Dbxref=NCBI_GP:MCE2617753.1;Name=MCE2617753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889926.1;locus_tag=LVR01_00275;product=ABC transporter ATP-binding protein;protein_id=MCE2617753.1;transl_table=11 JAJSBG010000001.1 Genbank gene 65365 66414 . + . ID=gene-LVR01_00280;Name=LVR01_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00280 JAJSBG010000001.1 Protein Homology CDS 65365 66414 . + 0 ID=cds-MCE2617754.1;Parent=gene-LVR01_00280;Dbxref=NCBI_GP:MCE2617754.1;Name=MCE2617754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399209.1;locus_tag=LVR01_00280;product=ABC transporter permease;protein_id=MCE2617754.1;transl_table=11 JAJSBG010000001.1 Genbank gene 66476 66799 . - . ID=gene-LVR01_00285;Name=LVR01_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00285 JAJSBG010000001.1 Protein Homology CDS 66476 66799 . - 0 ID=cds-MCE2617755.1;Parent=gene-LVR01_00285;Dbxref=NCBI_GP:MCE2617755.1;Name=MCE2617755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399208.1;locus_tag=LVR01_00285;product=helicase BlpT;protein_id=MCE2617755.1;transl_table=11 JAJSBG010000001.1 Genbank gene 67438 67776 . + . ID=gene-LVR01_00290;Name=LVR01_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00290 JAJSBG010000001.1 Protein Homology CDS 67438 67776 . + 0 ID=cds-MCE2617756.1;Parent=gene-LVR01_00290;Dbxref=NCBI_GP:MCE2617756.1;Name=MCE2617756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682119.1;locus_tag=LVR01_00290;product=LytTR family DNA-binding domain-containing protein;protein_id=MCE2617756.1;transl_table=11 JAJSBG010000001.1 Genbank gene 67781 68518 . + . ID=gene-LVR01_00295;Name=LVR01_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00295 JAJSBG010000001.1 Protein Homology CDS 67781 68518 . + 0 ID=cds-MCE2617757.1;Parent=gene-LVR01_00295;Dbxref=NCBI_GP:MCE2617757.1;Name=MCE2617757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219153.1;locus_tag=LVR01_00295;product=LytTR family DNA-binding domain-containing protein;protein_id=MCE2617757.1;transl_table=11 JAJSBG010000001.1 Genbank gene 68532 69872 . + . ID=gene-LVR01_00300;Name=LVR01_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00300 JAJSBG010000001.1 Protein Homology CDS 68532 69872 . + 0 ID=cds-MCE2617758.1;Parent=gene-LVR01_00300;Dbxref=NCBI_GP:MCE2617758.1;Name=MCE2617758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000275284.1;locus_tag=LVR01_00300;product=sensor histidine kinase;protein_id=MCE2617758.1;transl_table=11 JAJSBG010000001.1 Genbank gene 69917 70072 . - . ID=gene-LVR01_00305;Name=blpC;gbkey=Gene;gene=blpC;gene_biotype=protein_coding;locus_tag=LVR01_00305 JAJSBG010000001.1 Protein Homology CDS 69917 70072 . - 0 ID=cds-MCE2617759.1;Parent=gene-LVR01_00305;Dbxref=NCBI_GP:MCE2617759.1;Name=MCE2617759.1;gbkey=CDS;gene=blpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358812.1;locus_tag=LVR01_00305;product=quorum-sensing system pheromone BlpC;protein_id=MCE2617759.1;transl_table=11 JAJSBG010000001.1 Genbank gene 70129 71490 . - . ID=gene-LVR01_00310;Name=LVR01_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00310 JAJSBG010000001.1 Protein Homology CDS 70129 71490 . - 0 ID=cds-MCE2617760.1;Parent=gene-LVR01_00310;Dbxref=NCBI_GP:MCE2617760.1;Name=MCE2617760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069090.1;locus_tag=LVR01_00310;product=bacteriocin secretion accessory protein;protein_id=MCE2617760.1;transl_table=11 JAJSBG010000001.1 Genbank gene 71501 73654 . - . ID=gene-LVR01_00315;Name=blpA;gbkey=Gene;gene=blpA;gene_biotype=protein_coding;locus_tag=LVR01_00315 JAJSBG010000001.1 Protein Homology CDS 71501 73654 . - 0 ID=cds-MCE2617761.1;Parent=gene-LVR01_00315;Dbxref=NCBI_GP:MCE2617761.1;Name=MCE2617761.1;gbkey=CDS;gene=blpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125458604.1;locus_tag=LVR01_00315;product=peptide cleavage/export ABC transporter BlpA;protein_id=MCE2617761.1;transl_table=11 JAJSBG010000001.1 Genbank gene 73922 74149 . + . ID=gene-LVR01_00320;Name=LVR01_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00320 JAJSBG010000001.1 Protein Homology CDS 73922 74149 . + 0 ID=cds-MCE2617762.1;Parent=gene-LVR01_00320;Dbxref=NCBI_GP:MCE2617762.1;Name=MCE2617762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379955.1;locus_tag=LVR01_00320;product=Blp family class II bacteriocin;protein_id=MCE2617762.1;transl_table=11 JAJSBG010000001.1 Genbank gene 74201 74575 . + . ID=gene-LVR01_00325;Name=LVR01_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00325 JAJSBG010000001.1 Protein Homology CDS 74201 74575 . + 0 ID=cds-MCE2617763.1;Parent=gene-LVR01_00325;Dbxref=NCBI_GP:MCE2617763.1;Name=MCE2617763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270580.1;locus_tag=LVR01_00325;product=immunity protein;protein_id=MCE2617763.1;transl_table=11 JAJSBG010000001.1 Genbank gene 74581 74799 . + . ID=gene-LVR01_00330;Name=LVR01_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00330 JAJSBG010000001.1 Protein Homology CDS 74581 74799 . + 0 ID=cds-MCE2617764.1;Parent=gene-LVR01_00330;Dbxref=NCBI_GP:MCE2617764.1;Name=MCE2617764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438253.1;locus_tag=LVR01_00330;product=hypothetical protein;protein_id=MCE2617764.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 75104 75443 . + . ID=gene-LVR01_00335;Name=LVR01_00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00335;pseudo=true JAJSBG010000001.1 Protein Homology CDS 75104 75443 . + 0 ID=cds-LVR01_00335;Parent=gene-LVR01_00335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001826248.1;locus_tag=LVR01_00335;product=immunity protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 75604 76641 . + . ID=gene-LVR01_00340;Name=LVR01_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00340 JAJSBG010000001.1 Protein Homology CDS 75604 76641 . + 0 ID=cds-MCE2617765.1;Parent=gene-LVR01_00340;Dbxref=NCBI_GP:MCE2617765.1;Name=MCE2617765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744512.1;locus_tag=LVR01_00340;product=thioredoxin domain-containing protein;protein_id=MCE2617765.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 76886 76960 . + . ID=gene-LVR01_00345;Name=blpO;gbkey=Gene;gene=blpO;gene_biotype=pseudogene;locus_tag=LVR01_00345;pseudo=true JAJSBG010000001.1 Protein Homology CDS 76886 76960 . + 0 ID=cds-LVR01_00345;Parent=gene-LVR01_00345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=blpO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818346.1;locus_tag=LVR01_00345;product=bacteriocin-like peptide BlpO;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 76943 77119 . + . ID=gene-LVR01_00350;Name=LVR01_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00350 JAJSBG010000001.1 Protein Homology CDS 76943 77119 . + 0 ID=cds-MCE2617766.1;Parent=gene-LVR01_00350;Dbxref=NCBI_GP:MCE2617766.1;Name=MCE2617766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827758.1;locus_tag=LVR01_00350;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=MCE2617766.1;transl_table=11 JAJSBG010000001.1 Genbank gene 77151 77840 . + . ID=gene-LVR01_00355;Name=LVR01_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00355 JAJSBG010000001.1 Protein Homology CDS 77151 77840 . + 0 ID=cds-MCE2617767.1;Parent=gene-LVR01_00355;Dbxref=NCBI_GP:MCE2617767.1;Name=MCE2617767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760553.1;locus_tag=LVR01_00355;product=CPBP family intramembrane metalloprotease;protein_id=MCE2617767.1;transl_table=11 JAJSBG010000001.1 Genbank gene 77882 78130 . + . ID=gene-LVR01_00360;Name=LVR01_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00360 JAJSBG010000001.1 Protein Homology CDS 77882 78130 . + 0 ID=cds-MCE2617768.1;Parent=gene-LVR01_00360;Dbxref=NCBI_GP:MCE2617768.1;Name=MCE2617768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399200.1;locus_tag=LVR01_00360;product=hypothetical protein;protein_id=MCE2617768.1;transl_table=11 JAJSBG010000001.1 Genbank gene 78160 78771 . + . ID=gene-LVR01_00365;Name=LVR01_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00365 JAJSBG010000001.1 Protein Homology CDS 78160 78771 . + 0 ID=cds-MCE2617769.1;Parent=gene-LVR01_00365;Dbxref=NCBI_GP:MCE2617769.1;Name=MCE2617769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394041.1;locus_tag=LVR01_00365;product=CPBP family intramembrane metalloprotease;protein_id=MCE2617769.1;transl_table=11 JAJSBG010000001.1 Genbank gene 78934 79728 . + . ID=gene-LVR01_00370;Name=LVR01_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00370 JAJSBG010000001.1 Protein Homology CDS 78934 79728 . + 0 ID=cds-MCE2617770.1;Parent=gene-LVR01_00370;Dbxref=NCBI_GP:MCE2617770.1;Name=MCE2617770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000363010.1;locus_tag=LVR01_00370;product=phosphotransferase family protein;protein_id=MCE2617770.1;transl_table=11 JAJSBG010000001.1 Genbank gene 79725 80360 . + . ID=gene-LVR01_00375;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LVR01_00375 JAJSBG010000001.1 Protein Homology CDS 79725 80360 . + 0 ID=cds-MCE2617771.1;Parent=gene-LVR01_00375;Dbxref=NCBI_GP:MCE2617771.1;Name=MCE2617771.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266107.1;locus_tag=LVR01_00375;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=MCE2617771.1;transl_table=11 JAJSBG010000001.1 Genbank gene 80486 80965 . + . ID=gene-LVR01_00380;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LVR01_00380 JAJSBG010000001.1 Protein Homology CDS 80486 80965 . + 0 ID=cds-MCE2617772.1;Parent=gene-LVR01_00380;Dbxref=NCBI_GP:MCE2617772.1;Name=MCE2617772.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338698.1;locus_tag=LVR01_00380;product=ribosome maturation factor RimP;protein_id=MCE2617772.1;transl_table=11 JAJSBG010000001.1 Genbank gene 81009 82145 . + . ID=gene-LVR01_00385;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LVR01_00385 JAJSBG010000001.1 Protein Homology CDS 81009 82145 . + 0 ID=cds-MCE2617773.1;Parent=gene-LVR01_00385;Dbxref=NCBI_GP:MCE2617773.1;Name=MCE2617773.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032293.1;locus_tag=LVR01_00385;product=transcription termination factor NusA;protein_id=MCE2617773.1;transl_table=11 JAJSBG010000001.1 Genbank gene 82167 82460 . + . ID=gene-LVR01_00390;Name=LVR01_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00390 JAJSBG010000001.1 Protein Homology CDS 82167 82460 . + 0 ID=cds-MCE2617774.1;Parent=gene-LVR01_00390;Dbxref=NCBI_GP:MCE2617774.1;Name=MCE2617774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857559.1;locus_tag=LVR01_00390;product=YlxR family protein;protein_id=MCE2617774.1;transl_table=11 JAJSBG010000001.1 Genbank gene 82453 82752 . + . ID=gene-LVR01_00395;Name=LVR01_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00395 JAJSBG010000001.1 Protein Homology CDS 82453 82752 . + 0 ID=cds-MCE2617775.1;Parent=gene-LVR01_00395;Dbxref=NCBI_GP:MCE2617775.1;Name=MCE2617775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399195.1;locus_tag=LVR01_00395;product=YlxQ-related RNA-binding protein;protein_id=MCE2617775.1;transl_table=11 JAJSBG010000001.1 Genbank gene 82769 85570 . + . ID=gene-LVR01_00400;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LVR01_00400 JAJSBG010000001.1 Protein Homology CDS 82769 85570 . + 0 ID=cds-MCE2617776.1;Parent=gene-LVR01_00400;Dbxref=NCBI_GP:MCE2617776.1;Name=MCE2617776.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863140.1;locus_tag=LVR01_00400;product=translation initiation factor IF-2;protein_id=MCE2617776.1;transl_table=11 JAJSBG010000001.1 Genbank gene 85736 86086 . + . ID=gene-LVR01_00405;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LVR01_00405 JAJSBG010000001.1 Protein Homology CDS 85736 86086 . + 0 ID=cds-MCE2617777.1;Parent=gene-LVR01_00405;Dbxref=NCBI_GP:MCE2617777.1;Name=MCE2617777.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273594.1;locus_tag=LVR01_00405;product=30S ribosome-binding factor RbfA;protein_id=MCE2617777.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 86343 86681 . + . ID=gene-LVR01_00410;Name=LVR01_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00410;pseudo=true JAJSBG010000001.1 Protein Homology CDS 86343 86681 . + 0 ID=cds-LVR01_00410;Parent=gene-LVR01_00410;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840413.1;locus_tag=LVR01_00410;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 86821 87583 . + . ID=gene-LVR01_00415;Name=LVR01_00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00415;pseudo=true JAJSBG010000001.1 Protein Homology CDS 86821 87583 . + 0 ID=cds-LVR01_00415;Parent=gene-LVR01_00415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418959.1;locus_tag=LVR01_00415;product=restriction endonuclease;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 87579 87959 . + . ID=gene-LVR01_00420;Name=LVR01_00420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00420;pseudo=true JAJSBG010000001.1 Protein Homology CDS 87579 87959 . + 0 ID=cds-LVR01_00420;Parent=gene-LVR01_00420;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850937.1;locus_tag=LVR01_00420;product=DpnD/PcfM family protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 88023 89288 . - . ID=gene-LVR01_00425;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=LVR01_00425 JAJSBG010000001.1 Protein Homology CDS 88023 89288 . - 0 ID=cds-MCE2617778.1;Parent=gene-LVR01_00425;Dbxref=NCBI_GP:MCE2617778.1;Name=MCE2617778.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865856.1;locus_tag=LVR01_00425;product=DNA (cytosine-5-)-methyltransferase;protein_id=MCE2617778.1;transl_table=11 JAJSBG010000001.1 Genbank gene 89405 90895 . + . ID=gene-LVR01_00430;Name=LVR01_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00430 JAJSBG010000001.1 Protein Homology CDS 89405 90895 . + 0 ID=cds-MCE2617779.1;Parent=gene-LVR01_00430;Dbxref=NCBI_GP:MCE2617779.1;Name=MCE2617779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000372610.1;locus_tag=LVR01_00430;product=DNA mismatch repair protein MutH;protein_id=MCE2617779.1;transl_table=11 JAJSBG010000001.1 Genbank gene 90951 92213 . - . ID=gene-LVR01_00435;Name=LVR01_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00435 JAJSBG010000001.1 Protein Homology CDS 90951 92213 . - 0 ID=cds-MCE2617780.1;Parent=gene-LVR01_00435;Dbxref=NCBI_GP:MCE2617780.1;Name=MCE2617780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194492.1;locus_tag=LVR01_00435;product=purine permease;protein_id=MCE2617780.1;transl_table=11 JAJSBG010000001.1 Genbank gene 92213 92794 . - . ID=gene-LVR01_00440;Name=LVR01_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00440 JAJSBG010000001.1 Protein Homology CDS 92213 92794 . - 0 ID=cds-MCE2617781.1;Parent=gene-LVR01_00440;Dbxref=NCBI_GP:MCE2617781.1;Name=MCE2617781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770427.1;locus_tag=LVR01_00440;product=xanthine phosphoribosyltransferase;protein_id=MCE2617781.1;transl_table=11 JAJSBG010000001.1 cmsearch riboswitch 92917 93012 . - . ID=id-JAJSBG010000001.1:92917..93012;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000001.1 Genbank gene 93354 93740 . - . ID=gene-LVR01_00445;Name=LVR01_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00445 JAJSBG010000001.1 Protein Homology CDS 93354 93740 . - 0 ID=cds-MCE2617782.1;Parent=gene-LVR01_00445;Dbxref=NCBI_GP:MCE2617782.1;Name=MCE2617782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386237.1;locus_tag=LVR01_00445;product=VOC family protein;protein_id=MCE2617782.1;transl_table=11 JAJSBG010000001.1 Genbank gene 93752 94579 . - . ID=gene-LVR01_00450;Name=LVR01_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00450 JAJSBG010000001.1 Protein Homology CDS 93752 94579 . - 0 ID=cds-MCE2617783.1;Parent=gene-LVR01_00450;Dbxref=NCBI_GP:MCE2617783.1;Name=MCE2617783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596696.1;locus_tag=LVR01_00450;product=exodeoxyribonuclease III;protein_id=MCE2617783.1;transl_table=11 JAJSBG010000001.1 Genbank gene 94798 95697 . + . ID=gene-LVR01_00455;Name=LVR01_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00455 JAJSBG010000001.1 Protein Homology CDS 94798 95697 . + 0 ID=cds-MCE2617784.1;Parent=gene-LVR01_00455;Dbxref=NCBI_GP:MCE2617784.1;Name=MCE2617784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066791.1;locus_tag=LVR01_00455;product=CPBP family intramembrane metalloprotease;protein_id=MCE2617784.1;transl_table=11 JAJSBG010000001.1 Genbank gene 95681 95968 . + . ID=gene-LVR01_00460;Name=LVR01_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00460 JAJSBG010000001.1 Protein Homology CDS 95681 95968 . + 0 ID=cds-MCE2617785.1;Parent=gene-LVR01_00460;Dbxref=NCBI_GP:MCE2617785.1;Name=MCE2617785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006509.1;locus_tag=LVR01_00460;product=autorepressor SdpR family transcription factor;protein_id=MCE2617785.1;transl_table=11 JAJSBG010000001.1 Genbank gene 95949 96590 . + . ID=gene-LVR01_00465;Name=LVR01_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00465 JAJSBG010000001.1 Protein Homology CDS 95949 96590 . + 0 ID=cds-MCE2617786.1;Parent=gene-LVR01_00465;Dbxref=NCBI_GP:MCE2617786.1;Name=MCE2617786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694118.1;locus_tag=LVR01_00465;product=SdpI family protein;protein_id=MCE2617786.1;transl_table=11 JAJSBG010000001.1 Genbank gene 96717 97172 . + . ID=gene-LVR01_00470;Name=LVR01_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00470 JAJSBG010000001.1 Protein Homology CDS 96717 97172 . + 0 ID=cds-MCE2617787.1;Parent=gene-LVR01_00470;Dbxref=NCBI_GP:MCE2617787.1;Name=MCE2617787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923650.1;locus_tag=LVR01_00470;product=DUF3290 domain-containing protein;protein_id=MCE2617787.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 97169 97800 . + . ID=gene-LVR01_00475;Name=LVR01_00475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00475;pseudo=true JAJSBG010000001.1 Protein Homology CDS 97169 97800 . + 0 ID=cds-LVR01_00475;Parent=gene-LVR01_00475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521075.1;locus_tag=LVR01_00475;product=DUF421 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 97855 99600 . + . ID=gene-LVR01_00480;Name=LVR01_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00480 JAJSBG010000001.1 Protein Homology CDS 97855 99600 . + 0 ID=cds-MCE2617788.1;Parent=gene-LVR01_00480;Dbxref=NCBI_GP:MCE2617788.1;Name=MCE2617788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022567.1;locus_tag=LVR01_00480;product=ATP-binding cassette domain-containing protein;protein_id=MCE2617788.1;transl_table=11 JAJSBG010000001.1 Genbank gene 99590 101332 . + . ID=gene-LVR01_00485;Name=LVR01_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00485 JAJSBG010000001.1 Protein Homology CDS 99590 101332 . + 0 ID=cds-MCE2617789.1;Parent=gene-LVR01_00485;Dbxref=NCBI_GP:MCE2617789.1;Name=MCE2617789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256030.1;locus_tag=LVR01_00485;product=ABC transporter ATP-binding protein/permease;protein_id=MCE2617789.1;transl_table=11 JAJSBG010000001.1 Genbank gene 101516 102208 . + . ID=gene-LVR01_00490;Name=LVR01_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00490 JAJSBG010000001.1 Protein Homology CDS 101516 102208 . + 0 ID=cds-MCE2617790.1;Parent=gene-LVR01_00490;Dbxref=NCBI_GP:MCE2617790.1;Name=MCE2617790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922225.1;locus_tag=LVR01_00490;product=sugar transferase;protein_id=MCE2617790.1;transl_table=11 JAJSBG010000001.1 Genbank gene 102251 103477 . + . ID=gene-LVR01_00495;Name=LVR01_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00495 JAJSBG010000001.1 Protein Homology CDS 102251 103477 . + 0 ID=cds-MCE2617791.1;Parent=gene-LVR01_00495;Dbxref=NCBI_GP:MCE2617791.1;Name=MCE2617791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001134527.1;locus_tag=LVR01_00495;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=MCE2617791.1;transl_table=11 JAJSBG010000001.1 Genbank gene 104643 106769 . + . ID=gene-LVR01_00500;Name=pfbA;gbkey=Gene;gene=pfbA;gene_biotype=protein_coding;locus_tag=LVR01_00500 JAJSBG010000001.1 Protein Homology CDS 104643 106769 . + 0 ID=cds-MCE2617792.1;Parent=gene-LVR01_00500;Dbxref=NCBI_GP:MCE2617792.1;Name=MCE2617792.1;gbkey=CDS;gene=pfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398455.1;locus_tag=LVR01_00500;product=multi-ligand-binding adhesin PfbA;protein_id=MCE2617792.1;transl_table=11 JAJSBG010000001.1 Genbank gene 106753 107499 . + . ID=gene-LVR01_00505;Name=LVR01_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00505 JAJSBG010000001.1 Protein Homology CDS 106753 107499 . + 0 ID=cds-MCE2617793.1;Parent=gene-LVR01_00505;Dbxref=NCBI_GP:MCE2617793.1;Name=MCE2617793.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025053.2;locus_tag=LVR01_00505;product=protein phosphatase 2C domain-containing protein;protein_id=MCE2617793.1;transl_table=11 JAJSBG010000001.1 Genbank gene 107557 108198 . + . ID=gene-LVR01_00510;Name=LVR01_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00510 JAJSBG010000001.1 Protein Homology CDS 107557 108198 . + 0 ID=cds-MCE2617794.1;Parent=gene-LVR01_00510;Dbxref=NCBI_GP:MCE2617794.1;Name=MCE2617794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945326.1;locus_tag=LVR01_00510;product=phosphate uptake regulator PhoU;protein_id=MCE2617794.1;transl_table=11 JAJSBG010000001.1 Genbank gene 108211 109686 . + . ID=gene-LVR01_00515;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LVR01_00515 JAJSBG010000001.1 Protein Homology CDS 108211 109686 . + 0 ID=cds-MCE2617795.1;Parent=gene-LVR01_00515;Dbxref=NCBI_GP:MCE2617795.1;Name=MCE2617795.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848801.1;locus_tag=LVR01_00515;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=MCE2617795.1;transl_table=11 JAJSBG010000001.1 Genbank gene 109699 110709 . + . ID=gene-LVR01_00520;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LVR01_00520 JAJSBG010000001.1 Protein Homology CDS 109699 110709 . + 0 ID=cds-MCE2617796.1;Parent=gene-LVR01_00520;Dbxref=NCBI_GP:MCE2617796.1;Name=MCE2617796.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996568.1;locus_tag=LVR01_00520;product=UDP-glucose 4-epimerase GalE;protein_id=MCE2617796.1;transl_table=11 JAJSBG010000001.1 Genbank gene 110892 111551 . + . ID=gene-LVR01_00525;Name=LVR01_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00525 JAJSBG010000001.1 Protein Homology CDS 110892 111551 . + 0 ID=cds-MCE2617797.1;Parent=gene-LVR01_00525;Dbxref=NCBI_GP:MCE2617797.1;Name=MCE2617797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793810.1;locus_tag=LVR01_00525;product=DUF1868 domain-containing protein;protein_id=MCE2617797.1;transl_table=11 JAJSBG010000001.1 Genbank gene 111576 112643 . + . ID=gene-LVR01_00530;Name=LVR01_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00530 JAJSBG010000001.1 Protein Homology CDS 111576 112643 . + 0 ID=cds-MCE2617798.1;Parent=gene-LVR01_00530;Dbxref=NCBI_GP:MCE2617798.1;Name=MCE2617798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738359.1;locus_tag=LVR01_00530;product=extracellular solute-binding protein;protein_id=MCE2617798.1;transl_table=11 JAJSBG010000001.1 Genbank gene 112746 113756 . + . ID=gene-LVR01_00535;Name=LVR01_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00535 JAJSBG010000001.1 Protein Homology CDS 112746 113756 . + 0 ID=cds-MCE2617799.1;Parent=gene-LVR01_00535;Dbxref=NCBI_GP:MCE2617799.1;Name=MCE2617799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001847714.1;locus_tag=LVR01_00535;product=ABC transporter ATP-binding protein;protein_id=MCE2617799.1;transl_table=11 JAJSBG010000001.1 Genbank gene 113768 115459 . + . ID=gene-LVR01_00540;Name=LVR01_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00540 JAJSBG010000001.1 Protein Homology CDS 113768 115459 . + 0 ID=cds-MCE2617800.1;Parent=gene-LVR01_00540;Dbxref=NCBI_GP:MCE2617800.1;Name=MCE2617800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861837.1;locus_tag=LVR01_00540;product=iron ABC transporter permease;protein_id=MCE2617800.1;transl_table=11 JAJSBG010000001.1 Genbank gene 115462 116172 . + . ID=gene-LVR01_00545;Name=LVR01_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00545 JAJSBG010000001.1 Protein Homology CDS 115462 116172 . + 0 ID=cds-MCE2617801.1;Parent=gene-LVR01_00545;Dbxref=NCBI_GP:MCE2617801.1;Name=MCE2617801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127555.1;locus_tag=LVR01_00545;product=MgtC/SapB family protein;protein_id=MCE2617801.1;transl_table=11 JAJSBG010000001.1 Genbank gene 116268 116459 . + . ID=gene-LVR01_00550;Name=LVR01_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00550 JAJSBG010000001.1 Protein Homology CDS 116268 116459 . + 0 ID=cds-MCE2617802.1;Parent=gene-LVR01_00550;Dbxref=NCBI_GP:MCE2617802.1;Name=MCE2617802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656293.1;locus_tag=LVR01_00550;product=hypothetical protein;protein_id=MCE2617802.1;transl_table=11 JAJSBG010000001.1 Genbank gene 116744 117745 . + . ID=gene-LVR01_00555;Name=LVR01_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00555 JAJSBG010000001.1 Protein Homology CDS 116744 117745 . + 0 ID=cds-MCE2617803.1;Parent=gene-LVR01_00555;Dbxref=NCBI_GP:MCE2617803.1;Name=MCE2617803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789954.1;locus_tag=LVR01_00555;product=LacI family transcriptional regulator;protein_id=MCE2617803.1;transl_table=11 JAJSBG010000001.1 cmsearch binding_site 117957 118187 . + . ID=id-JAJSBG010000001.1:117957..118187;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000001.1 Genbank gene 118354 118638 . + . ID=gene-LVR01_00560;Name=LVR01_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00560 JAJSBG010000001.1 GeneMarkS-2+ CDS 118354 118638 . + 0 ID=cds-MCE2617804.1;Parent=gene-LVR01_00560;Dbxref=NCBI_GP:MCE2617804.1;Name=MCE2617804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_00560;product=hypothetical protein;protein_id=MCE2617804.1;transl_table=11 JAJSBG010000001.1 cmsearch binding_site 118714 118939 . + . ID=id-JAJSBG010000001.1:118714..118939;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000001.1 Genbank gene 119011 120372 . + . ID=gene-LVR01_00565;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LVR01_00565 JAJSBG010000001.1 Protein Homology CDS 119011 120372 . + 0 ID=cds-MCE2617805.1;Parent=gene-LVR01_00565;Dbxref=NCBI_GP:MCE2617805.1;Name=MCE2617805.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398943.1;locus_tag=LVR01_00565;product=anthranilate synthase component I;protein_id=MCE2617805.1;transl_table=11 JAJSBG010000001.1 Genbank gene 120369 120935 . + . ID=gene-LVR01_00570;Name=LVR01_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00570 JAJSBG010000001.1 Protein Homology CDS 120369 120935 . + 0 ID=cds-MCE2617806.1;Parent=gene-LVR01_00570;Dbxref=NCBI_GP:MCE2617806.1;Name=MCE2617806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730493.1;locus_tag=LVR01_00570;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=MCE2617806.1;transl_table=11 JAJSBG010000001.1 Genbank gene 120946 121950 . + . ID=gene-LVR01_00575;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LVR01_00575 JAJSBG010000001.1 Protein Homology CDS 120946 121950 . + 0 ID=cds-MCE2617807.1;Parent=gene-LVR01_00575;Dbxref=NCBI_GP:MCE2617807.1;Name=MCE2617807.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517337.1;locus_tag=LVR01_00575;product=anthranilate phosphoribosyltransferase;protein_id=MCE2617807.1;transl_table=11 JAJSBG010000001.1 Genbank gene 121947 122714 . + . ID=gene-LVR01_00580;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LVR01_00580 JAJSBG010000001.1 Protein Homology CDS 121947 122714 . + 0 ID=cds-MCE2617808.1;Parent=gene-LVR01_00580;Dbxref=NCBI_GP:MCE2617808.1;Name=MCE2617808.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227478.1;locus_tag=LVR01_00580;product=indole-3-glycerol phosphate synthase TrpC;protein_id=MCE2617808.1;transl_table=11 JAJSBG010000001.1 Genbank gene 122701 123300 . + . ID=gene-LVR01_00585;Name=LVR01_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00585 JAJSBG010000001.1 Protein Homology CDS 122701 123300 . + 0 ID=cds-MCE2617809.1;Parent=gene-LVR01_00585;Dbxref=NCBI_GP:MCE2617809.1;Name=MCE2617809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000169895.1;locus_tag=LVR01_00585;product=phosphoribosylanthranilate isomerase;protein_id=MCE2617809.1;transl_table=11 JAJSBG010000001.1 Genbank gene 123278 124501 . + . ID=gene-LVR01_00590;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LVR01_00590 JAJSBG010000001.1 Protein Homology CDS 123278 124501 . + 0 ID=cds-MCE2617810.1;Parent=gene-LVR01_00590;Dbxref=NCBI_GP:MCE2617810.1;Name=MCE2617810.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331289.1;locus_tag=LVR01_00590;product=tryptophan synthase subunit beta;protein_id=MCE2617810.1;transl_table=11 JAJSBG010000001.1 Genbank gene 124494 125270 . + . ID=gene-LVR01_00595;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LVR01_00595 JAJSBG010000001.1 Protein Homology CDS 124494 125270 . + 0 ID=cds-MCE2617811.1;Parent=gene-LVR01_00595;Dbxref=NCBI_GP:MCE2617811.1;Name=MCE2617811.1;gbkey=CDS;gene=trpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397537.1;locus_tag=LVR01_00595;product=tryptophan synthase subunit alpha;protein_id=MCE2617811.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 125242 125340 . - . ID=gene-LVR01_00600;Name=LVR01_00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00600;pseudo=true JAJSBG010000001.1 Protein Homology CDS 125242 125340 . - 0 ID=cds-LVR01_00600;Parent=gene-LVR01_00600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564993.1;locus_tag=LVR01_00600;product=prepilin peptidase;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 125464 126195 . + . ID=gene-LVR01_00605;Name=LVR01_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00605 JAJSBG010000001.1 Protein Homology CDS 125464 126195 . + 0 ID=cds-MCE2617812.1;Parent=gene-LVR01_00605;Dbxref=NCBI_GP:MCE2617812.1;Name=MCE2617812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934015.1;locus_tag=LVR01_00605;product=hypothetical protein;protein_id=MCE2617812.1;transl_table=11 JAJSBG010000001.1 Genbank gene 126210 127361 . + . ID=gene-LVR01_00610;Name=LVR01_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00610 JAJSBG010000001.1 Protein Homology CDS 126210 127361 . + 0 ID=cds-MCE2617813.1;Parent=gene-LVR01_00610;Dbxref=NCBI_GP:MCE2617813.1;Name=MCE2617813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481741.1;locus_tag=LVR01_00610;product=XRE family transcriptional regulator;protein_id=MCE2617813.1;transl_table=11 JAJSBG010000001.1 Genbank gene 127413 128072 . - . ID=gene-LVR01_00615;Name=LVR01_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00615 JAJSBG010000001.1 Protein Homology CDS 127413 128072 . - 0 ID=cds-MCE2617814.1;Parent=gene-LVR01_00615;Dbxref=NCBI_GP:MCE2617814.1;Name=MCE2617814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564993.1;locus_tag=LVR01_00615;product=prepilin peptidase;protein_id=MCE2617814.1;transl_table=11 JAJSBG010000001.1 Genbank gene 128142 128597 . + . ID=gene-LVR01_00620;Name=LVR01_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00620 JAJSBG010000001.1 Protein Homology CDS 128142 128597 . + 0 ID=cds-MCE2617815.1;Parent=gene-LVR01_00620;Dbxref=NCBI_GP:MCE2617815.1;Name=MCE2617815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517327.1;locus_tag=LVR01_00620;product=GNAT family N-acetyltransferase;protein_id=MCE2617815.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 128779 129781 . + . ID=gene-LVR01_00625;Name=LVR01_00625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00625;pseudo=true JAJSBG010000001.1 Protein Homology CDS 128779 129781 . + 0 ID=cds-LVR01_00625;Parent=gene-LVR01_00625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230206.1;locus_tag=LVR01_00625;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 129935 130852 . + . ID=gene-LVR01_00630;Name=LVR01_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00630 JAJSBG010000001.1 Protein Homology CDS 129935 130852 . + 0 ID=cds-MCE2617816.1;Parent=gene-LVR01_00630;Dbxref=NCBI_GP:MCE2617816.1;Name=MCE2617816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084977.1;locus_tag=LVR01_00630;product=sugar ABC transporter permease;protein_id=MCE2617816.1;transl_table=11 JAJSBG010000001.1 Genbank gene 130863 131753 . + . ID=gene-LVR01_00635;Name=LVR01_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00635 JAJSBG010000001.1 Protein Homology CDS 130863 131753 . + 0 ID=cds-MCE2617817.1;Parent=gene-LVR01_00635;Dbxref=NCBI_GP:MCE2617817.1;Name=MCE2617817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797960.1;locus_tag=LVR01_00635;product=carbohydrate ABC transporter permease;protein_id=MCE2617817.1;transl_table=11 JAJSBG010000001.1 Genbank gene 131782 133398 . + . ID=gene-LVR01_00640;Name=LVR01_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00640 JAJSBG010000001.1 Protein Homology CDS 131782 133398 . + 0 ID=cds-MCE2617818.1;Parent=gene-LVR01_00640;Dbxref=NCBI_GP:MCE2617818.1;Name=MCE2617818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669747.1;locus_tag=LVR01_00640;product=ABC transporter substrate-binding protein;protein_id=MCE2617818.1;transl_table=11 JAJSBG010000001.1 Genbank gene 133408 134727 . + . ID=gene-LVR01_00645;Name=LVR01_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00645 JAJSBG010000001.1 Protein Homology CDS 133408 134727 . + 0 ID=cds-MCE2617819.1;Parent=gene-LVR01_00645;Dbxref=NCBI_GP:MCE2617819.1;Name=MCE2617819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866559.1;locus_tag=LVR01_00645;product=glycoside hydrolase family 32 protein;protein_id=MCE2617819.1;transl_table=11 JAJSBG010000001.1 Genbank gene 135086 135158 . - . ID=gene-LVR01_00650;Name=LVR01_00650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_00650 JAJSBG010000001.1 tRNAscan-SE tRNA 135086 135158 . - . ID=rna-LVR01_00650;Parent=gene-LVR01_00650;anticodon=(pos:complement(135123..135125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_00650;product=tRNA-Lys JAJSBG010000001.1 tRNAscan-SE exon 135086 135158 . - . ID=exon-LVR01_00650-1;Parent=rna-LVR01_00650;anticodon=(pos:complement(135123..135125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_00650;product=tRNA-Lys JAJSBG010000001.1 Genbank gene 135423 136694 . - . ID=gene-LVR01_00655;Name=LVR01_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00655 JAJSBG010000001.1 Protein Homology CDS 135423 136694 . - 0 ID=cds-MCE2617820.1;Parent=gene-LVR01_00655;Dbxref=NCBI_GP:MCE2617820.1;Name=MCE2617820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113185.1;locus_tag=LVR01_00655;product=replication-associated recombination protein A;protein_id=MCE2617820.1;transl_table=11 JAJSBG010000001.1 Genbank gene 136976 137197 . + . ID=gene-LVR01_00660;Name=LVR01_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00660 JAJSBG010000001.1 Protein Homology CDS 136976 137197 . + 0 ID=cds-MCE2617821.1;Parent=gene-LVR01_00660;Dbxref=NCBI_GP:MCE2617821.1;Name=MCE2617821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397532.1;locus_tag=LVR01_00660;product=hypothetical protein;protein_id=MCE2617821.1;transl_table=11 JAJSBG010000001.1 Genbank gene 137352 137540 . + . ID=gene-LVR01_00665;Name=LVR01_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00665 JAJSBG010000001.1 Protein Homology CDS 137352 137540 . + 0 ID=cds-MCE2617822.1;Parent=gene-LVR01_00665;Dbxref=NCBI_GP:MCE2617822.1;Name=MCE2617822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196536.1;locus_tag=LVR01_00665;product=hypothetical protein;protein_id=MCE2617822.1;transl_table=11 JAJSBG010000001.1 Genbank gene 137676 137855 . + . ID=gene-LVR01_00670;Name=LVR01_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00670 JAJSBG010000001.1 Protein Homology CDS 137676 137855 . + 0 ID=cds-MCE2617823.1;Parent=gene-LVR01_00670;Dbxref=NCBI_GP:MCE2617823.1;Name=MCE2617823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397531.1;locus_tag=LVR01_00670;product=type II toxin-antitoxin system HicA family toxin;protein_id=MCE2617823.1;transl_table=11 JAJSBG010000001.1 Genbank gene 137892 138344 . + . ID=gene-LVR01_00675;Name=LVR01_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00675 JAJSBG010000001.1 Protein Homology CDS 137892 138344 . + 0 ID=cds-MCE2617824.1;Parent=gene-LVR01_00675;Dbxref=NCBI_GP:MCE2617824.1;Name=MCE2617824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961815.1;locus_tag=LVR01_00675;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MCE2617824.1;transl_table=11 JAJSBG010000001.1 Genbank gene 138635 139105 . + . ID=gene-LVR01_00680;Name=LVR01_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00680 JAJSBG010000001.1 Protein Homology CDS 138635 139105 . + 0 ID=cds-MCE2617825.1;Parent=gene-LVR01_00680;Dbxref=NCBI_GP:MCE2617825.1;Name=MCE2617825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257105.1;locus_tag=LVR01_00680;product=DUF3013 family protein;protein_id=MCE2617825.1;transl_table=11 JAJSBG010000001.1 Genbank gene 139161 139703 . + . ID=gene-LVR01_00685;Name=LVR01_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00685 JAJSBG010000001.1 Protein Homology CDS 139161 139703 . + 0 ID=cds-MCE2617826.1;Parent=gene-LVR01_00685;Dbxref=NCBI_GP:MCE2617826.1;Name=MCE2617826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891119.1;locus_tag=LVR01_00685;product=hypothetical protein;protein_id=MCE2617826.1;transl_table=11 JAJSBG010000001.1 Genbank gene 139753 140187 . + . ID=gene-LVR01_00690;Name=LVR01_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00690 JAJSBG010000001.1 Protein Homology CDS 139753 140187 . + 0 ID=cds-MCE2617827.1;Parent=gene-LVR01_00690;Dbxref=NCBI_GP:MCE2617827.1;Name=MCE2617827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418166.1;locus_tag=LVR01_00690;product=NUDIX hydrolase;protein_id=MCE2617827.1;transl_table=11 JAJSBG010000001.1 Genbank gene 140325 141275 . + . ID=gene-LVR01_00695;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LVR01_00695 JAJSBG010000001.1 Protein Homology CDS 140325 141275 . + 0 ID=cds-MCE2617828.1;Parent=gene-LVR01_00695;Dbxref=NCBI_GP:MCE2617828.1;Name=MCE2617828.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451122.1;locus_tag=LVR01_00695;product=50S ribosomal protein L11 methyltransferase;protein_id=MCE2617828.1;transl_table=11 JAJSBG010000001.1 Genbank gene 141277 142020 . + . ID=gene-LVR01_00700;Name=LVR01_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00700 JAJSBG010000001.1 Protein Homology CDS 141277 142020 . + 0 ID=cds-MCE2617829.1;Parent=gene-LVR01_00700;Dbxref=NCBI_GP:MCE2617829.1;Name=MCE2617829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188214.1;locus_tag=LVR01_00700;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=MCE2617829.1;transl_table=11 JAJSBG010000001.1 Genbank gene 142031 143827 . + . ID=gene-LVR01_00705;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=LVR01_00705 JAJSBG010000001.1 Protein Homology CDS 142031 143827 . + 0 ID=cds-MCE2617830.1;Parent=gene-LVR01_00705;Dbxref=NCBI_GP:MCE2617830.1;Name=MCE2617830.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435555.1;locus_tag=LVR01_00705;product=oligoendopeptidase F;protein_id=MCE2617830.1;transl_table=11 JAJSBG010000001.1 Genbank gene 143888 144565 . - . ID=gene-LVR01_00710;Name=LVR01_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00710 JAJSBG010000001.1 Protein Homology CDS 143888 144565 . - 0 ID=cds-MCE2617831.1;Parent=gene-LVR01_00710;Dbxref=NCBI_GP:MCE2617831.1;Name=MCE2617831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433071.1;locus_tag=LVR01_00710;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MCE2617831.1;transl_table=11 JAJSBG010000001.1 Genbank gene 144833 145945 . + . ID=gene-LVR01_00715;Name=LVR01_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00715 JAJSBG010000001.1 Protein Homology CDS 144833 145945 . + 0 ID=cds-MCE2617832.1;Parent=gene-LVR01_00715;Dbxref=NCBI_GP:MCE2617832.1;Name=MCE2617832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399294.1;locus_tag=LVR01_00715;product=ThiF family adenylyltransferase;protein_id=MCE2617832.1;transl_table=11 JAJSBG010000001.1 Genbank gene 145915 146685 . + . ID=gene-LVR01_00720;Name=LVR01_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00720 JAJSBG010000001.1 Protein Homology CDS 145915 146685 . + 0 ID=cds-MCE2617833.1;Parent=gene-LVR01_00720;Dbxref=NCBI_GP:MCE2617833.1;Name=MCE2617833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966490.1;locus_tag=LVR01_00720;product=ABC transporter ATP-binding protein;protein_id=MCE2617833.1;transl_table=11 JAJSBG010000001.1 Genbank gene 146678 147442 . + . ID=gene-LVR01_00725;Name=LVR01_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00725 JAJSBG010000001.1 Protein Homology CDS 146678 147442 . + 0 ID=cds-MCE2617834.1;Parent=gene-LVR01_00725;Dbxref=NCBI_GP:MCE2617834.1;Name=MCE2617834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863667.1;locus_tag=LVR01_00725;product=ABC transporter permease;protein_id=MCE2617834.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 147707 147954 . - . ID=gene-LVR01_00730;Name=LVR01_00730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00730;pseudo=true JAJSBG010000001.1 Protein Homology CDS 147707 147954 . - 0 ID=cds-LVR01_00730;Parent=gene-LVR01_00730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_00730;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 148206 148973 . - . ID=gene-LVR01_00735;Name=LVR01_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00735 JAJSBG010000001.1 Protein Homology CDS 148206 148973 . - 0 ID=cds-MCE2617835.1;Parent=gene-LVR01_00735;Dbxref=NCBI_GP:MCE2617835.1;Name=MCE2617835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000498766.1;locus_tag=LVR01_00735;product=hypothetical protein;protein_id=MCE2617835.1;transl_table=11 JAJSBG010000001.1 Genbank gene 148990 149685 . - . ID=gene-LVR01_00740;Name=LVR01_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00740 JAJSBG010000001.1 Protein Homology CDS 148990 149685 . - 0 ID=cds-MCE2617836.1;Parent=gene-LVR01_00740;Dbxref=NCBI_GP:MCE2617836.1;Name=MCE2617836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256110.1;locus_tag=LVR01_00740;product=ABC transporter ATP-binding protein;protein_id=MCE2617836.1;transl_table=11 JAJSBG010000001.1 Genbank gene 149690 150055 . - . ID=gene-LVR01_00745;Name=LVR01_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00745 JAJSBG010000001.1 Protein Homology CDS 149690 150055 . - 0 ID=cds-MCE2617837.1;Parent=gene-LVR01_00745;Dbxref=NCBI_GP:MCE2617837.1;Name=MCE2617837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256112.1;locus_tag=LVR01_00745;product=GntR family transcriptional regulator;protein_id=MCE2617837.1;transl_table=11 JAJSBG010000001.1 Genbank gene 150195 150668 . + . ID=gene-LVR01_00750;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LVR01_00750 JAJSBG010000001.1 Protein Homology CDS 150195 150668 . + 0 ID=cds-MCE2617838.1;Parent=gene-LVR01_00750;Dbxref=NCBI_GP:MCE2617838.1;Name=MCE2617838.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203675.1;locus_tag=LVR01_00750;product=transcriptional regulator NrdR;protein_id=MCE2617838.1;transl_table=11 JAJSBG010000001.1 Genbank gene 150669 151838 . + . ID=gene-LVR01_00755;Name=LVR01_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00755 JAJSBG010000001.1 Protein Homology CDS 150669 151838 . + 0 ID=cds-MCE2617839.1;Parent=gene-LVR01_00755;Dbxref=NCBI_GP:MCE2617839.1;Name=MCE2617839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000802368.1;locus_tag=LVR01_00755;product=replication initiation and membrane attachment family protein;protein_id=MCE2617839.1;transl_table=11 JAJSBG010000001.1 Genbank gene 151839 152735 . + . ID=gene-LVR01_00760;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=LVR01_00760 JAJSBG010000001.1 Protein Homology CDS 151839 152735 . + 0 ID=cds-MCE2617840.1;Parent=gene-LVR01_00760;Dbxref=NCBI_GP:MCE2617840.1;Name=MCE2617840.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398880.1;locus_tag=LVR01_00760;product=primosomal protein DnaI;protein_id=MCE2617840.1;transl_table=11 JAJSBG010000001.1 Genbank gene 152732 153445 . + . ID=gene-LVR01_00765;Name=LVR01_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00765 JAJSBG010000001.1 Protein Homology CDS 152732 153445 . + 0 ID=cds-MCE2617841.1;Parent=gene-LVR01_00765;Dbxref=NCBI_GP:MCE2617841.1;Name=MCE2617841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140867.1;locus_tag=LVR01_00765;product=NADPH-dependent oxidoreductase;protein_id=MCE2617841.1;transl_table=11 JAJSBG010000001.1 Genbank gene 153459 154769 . + . ID=gene-LVR01_00770;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LVR01_00770 JAJSBG010000001.1 Protein Homology CDS 153459 154769 . + 0 ID=cds-MCE2617842.1;Parent=gene-LVR01_00770;Dbxref=NCBI_GP:MCE2617842.1;Name=MCE2617842.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=LVR01_00770;product=ribosome biogenesis GTPase Der;protein_id=MCE2617842.1;transl_table=11 JAJSBG010000001.1 Genbank gene 154850 155185 . + . ID=gene-LVR01_00775;Name=LVR01_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00775 JAJSBG010000001.1 Protein Homology CDS 154850 155185 . + 0 ID=cds-MCE2617843.1;Parent=gene-LVR01_00775;Dbxref=NCBI_GP:MCE2617843.1;Name=MCE2617843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400494.1;locus_tag=LVR01_00775;product=hypothetical protein;protein_id=MCE2617843.1;transl_table=11 JAJSBG010000001.1 Genbank gene 155217 156008 . + . ID=gene-LVR01_00780;Name=LVR01_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00780 JAJSBG010000001.1 Protein Homology CDS 155217 156008 . + 0 ID=cds-MCE2617844.1;Parent=gene-LVR01_00780;Dbxref=NCBI_GP:MCE2617844.1;Name=MCE2617844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398883.1;locus_tag=LVR01_00780;product=hypothetical protein;protein_id=MCE2617844.1;transl_table=11 JAJSBG010000001.1 Genbank gene 156040 156642 . + . ID=gene-LVR01_00785;Name=LVR01_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00785 JAJSBG010000001.1 Protein Homology CDS 156040 156642 . + 0 ID=cds-MCE2617845.1;Parent=gene-LVR01_00785;Dbxref=NCBI_GP:MCE2617845.1;Name=MCE2617845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475766.1;locus_tag=LVR01_00785;product=hypothetical protein;protein_id=MCE2617845.1;transl_table=11 JAJSBG010000001.1 Genbank gene 156646 157296 . + . ID=gene-LVR01_00790;Name=LVR01_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00790 JAJSBG010000001.1 Protein Homology CDS 156646 157296 . + 0 ID=cds-MCE2617846.1;Parent=gene-LVR01_00790;Dbxref=NCBI_GP:MCE2617846.1;Name=MCE2617846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763094.1;locus_tag=LVR01_00790;product=ABC transporter ATP-binding protein;protein_id=MCE2617846.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 157307 157593 . + . ID=gene-LVR01_00795;Name=LVR01_00795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00795;pseudo=true JAJSBG010000001.1 Protein Homology CDS 157307 157593 . + 0 ID=cds-LVR01_00795;Parent=gene-LVR01_00795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940707.1;locus_tag=LVR01_00795;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 157739 160252 . + . ID=gene-LVR01_00800;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LVR01_00800 JAJSBG010000001.1 Protein Homology CDS 157739 160252 . + 0 ID=cds-MCE2617847.1;Parent=gene-LVR01_00800;Dbxref=NCBI_GP:MCE2617847.1;Name=MCE2617847.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398886.1;locus_tag=LVR01_00800;product=preprotein translocase subunit SecA;protein_id=MCE2617847.1;transl_table=11 JAJSBG010000001.1 Genbank gene 160333 161364 . + . ID=gene-LVR01_00805;Name=LVR01_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00805 JAJSBG010000001.1 Protein Homology CDS 160333 161364 . + 0 ID=cds-MCE2617848.1;Parent=gene-LVR01_00805;Dbxref=NCBI_GP:MCE2617848.1;Name=MCE2617848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232189.1;locus_tag=LVR01_00805;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MCE2617848.1;transl_table=11 JAJSBG010000001.1 Genbank gene 161366 162397 . + . ID=gene-LVR01_00810;Name=LVR01_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00810 JAJSBG010000001.1 Protein Homology CDS 161366 162397 . + 0 ID=cds-MCE2617849.1;Parent=gene-LVR01_00810;Dbxref=NCBI_GP:MCE2617849.1;Name=MCE2617849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517149.1;locus_tag=LVR01_00810;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MCE2617849.1;transl_table=11 JAJSBG010000001.1 Genbank gene 162442 162804 . + . ID=gene-LVR01_00815;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LVR01_00815 JAJSBG010000001.1 Protein Homology CDS 162442 162804 . + 0 ID=cds-MCE2617850.1;Parent=gene-LVR01_00815;Dbxref=NCBI_GP:MCE2617850.1;Name=MCE2617850.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521175.1;locus_tag=LVR01_00815;product=holo-ACP synthase;protein_id=MCE2617850.1;transl_table=11 JAJSBG010000001.1 Genbank gene 162794 163897 . + . ID=gene-LVR01_00820;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LVR01_00820 JAJSBG010000001.1 Protein Homology CDS 162794 163897 . + 0 ID=cds-MCE2617851.1;Parent=gene-LVR01_00820;Dbxref=NCBI_GP:MCE2617851.1;Name=MCE2617851.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648056.1;locus_tag=LVR01_00820;product=alanine racemase;protein_id=MCE2617851.1;transl_table=11 JAJSBG010000001.1 Genbank gene 163916 165931 . + . ID=gene-LVR01_00825;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LVR01_00825 JAJSBG010000001.1 Protein Homology CDS 163916 165931 . + 0 ID=cds-MCE2617852.1;Parent=gene-LVR01_00825;Dbxref=NCBI_GP:MCE2617852.1;Name=MCE2617852.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001048793.1;locus_tag=LVR01_00825;product=ATP-dependent DNA helicase RecG;protein_id=MCE2617852.1;transl_table=11 JAJSBG010000001.1 Genbank gene 166248 167228 . + . ID=gene-LVR01_00830;Name=LVR01_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00830 JAJSBG010000001.1 Protein Homology CDS 166248 167228 . + 0 ID=cds-MCE2617853.1;Parent=gene-LVR01_00830;Dbxref=NCBI_GP:MCE2617853.1;Name=MCE2617853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844805.1;locus_tag=LVR01_00830;product=acetylxylan esterase;protein_id=MCE2617853.1;transl_table=11 JAJSBG010000001.1 Genbank gene 167976 168203 . + . ID=gene-LVR01_00835;Name=LVR01_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00835 JAJSBG010000001.1 Protein Homology CDS 167976 168203 . + 0 ID=cds-MCE2617854.1;Parent=gene-LVR01_00835;Dbxref=NCBI_GP:MCE2617854.1;Name=MCE2617854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000576349.1;locus_tag=LVR01_00835;product=hypothetical protein;protein_id=MCE2617854.1;transl_table=11 JAJSBG010000001.1 Genbank gene 168491 168676 . + . ID=gene-LVR01_00840;Name=LVR01_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00840 JAJSBG010000001.1 Protein Homology CDS 168491 168676 . + 0 ID=cds-MCE2617855.1;Parent=gene-LVR01_00840;Dbxref=NCBI_GP:MCE2617855.1;Name=MCE2617855.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=LVR01_00840;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2617855.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 168814 171807 . + . ID=gene-LVR01_00845;Name=LVR01_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_00845;pseudo=true JAJSBG010000001.1 Protein Homology CDS 168814 171807 . + 0 ID=cds-LVR01_00845;Parent=gene-LVR01_00845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009569756.1;locus_tag=LVR01_00845;product=exo-alpha-sialidase;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 172524 176135 . + . ID=gene-LVR01_00850;Name=LVR01_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00850 JAJSBG010000001.1 Protein Homology CDS 172524 176135 . + 0 ID=cds-MCE2617856.1;Parent=gene-LVR01_00850;Dbxref=NCBI_GP:MCE2617856.1;Name=MCE2617856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284821.1;locus_tag=LVR01_00850;product=trypsin-like peptidase domain-containing protein;protein_id=MCE2617856.1;transl_table=11 JAJSBG010000001.1 Genbank gene 176424 177398 . + . ID=gene-LVR01_00855;Name=LVR01_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00855 JAJSBG010000001.1 Protein Homology CDS 176424 177398 . + 0 ID=cds-MCE2617857.1;Parent=gene-LVR01_00855;Dbxref=NCBI_GP:MCE2617857.1;Name=MCE2617857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=LVR01_00855;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCE2617857.1;transl_table=11 JAJSBG010000001.1 Genbank gene 178688 179140 . + . ID=gene-LVR01_00860;Name=LVR01_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00860 JAJSBG010000001.1 Protein Homology CDS 178688 179140 . + 0 ID=cds-MCE2617858.1;Parent=gene-LVR01_00860;Dbxref=NCBI_GP:MCE2617858.1;Name=MCE2617858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587452.1;locus_tag=LVR01_00860;product=YhcH/YjgK/YiaL family protein;protein_id=MCE2617858.1;transl_table=11 JAJSBG010000001.1 Genbank gene 179159 180496 . + . ID=gene-LVR01_00865;Name=LVR01_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00865 JAJSBG010000001.1 Protein Homology CDS 179159 180496 . + 0 ID=cds-MCE2617859.1;Parent=gene-LVR01_00865;Dbxref=NCBI_GP:MCE2617859.1;Name=MCE2617859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738772.1;locus_tag=LVR01_00865;product=sugar ABC transporter substrate-binding protein;protein_id=MCE2617859.1;transl_table=11 JAJSBG010000001.1 Genbank gene 180575 181459 . + . ID=gene-LVR01_00870;Name=LVR01_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00870 JAJSBG010000001.1 Protein Homology CDS 180575 181459 . + 0 ID=cds-MCE2617860.1;Parent=gene-LVR01_00870;Dbxref=NCBI_GP:MCE2617860.1;Name=MCE2617860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999669.1;locus_tag=LVR01_00870;product=sugar ABC transporter permease;protein_id=MCE2617860.1;transl_table=11 JAJSBG010000001.1 Genbank gene 181459 182292 . + . ID=gene-LVR01_00875;Name=LVR01_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00875 JAJSBG010000001.1 Protein Homology CDS 181459 182292 . + 0 ID=cds-MCE2617861.1;Parent=gene-LVR01_00875;Dbxref=NCBI_GP:MCE2617861.1;Name=MCE2617861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250560.1;locus_tag=LVR01_00875;product=carbohydrate ABC transporter permease;protein_id=MCE2617861.1;transl_table=11 JAJSBG010000001.1 Genbank gene 182310 184403 . + . ID=gene-LVR01_00880;Name=nanB;gbkey=Gene;gene=nanB;gene_biotype=protein_coding;locus_tag=LVR01_00880 JAJSBG010000001.1 Protein Homology CDS 182310 184403 . + 0 ID=cds-MCE2617862.1;Parent=gene-LVR01_00880;Dbxref=NCBI_GP:MCE2617862.1;Name=MCE2617862.1;gbkey=CDS;gene=nanB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042179.1;locus_tag=LVR01_00880;product=neuraminidase NanB;protein_id=MCE2617862.1;transl_table=11 JAJSBG010000001.1 Genbank gene 184416 185519 . + . ID=gene-LVR01_00885;Name=LVR01_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00885 JAJSBG010000001.1 Protein Homology CDS 184416 185519 . + 0 ID=cds-MCE2617863.1;Parent=gene-LVR01_00885;Dbxref=NCBI_GP:MCE2617863.1;Name=MCE2617863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241740.1;locus_tag=LVR01_00885;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCE2617863.1;transl_table=11 JAJSBG010000001.1 Genbank gene 185699 186397 . + . ID=gene-LVR01_00890;Name=LVR01_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00890 JAJSBG010000001.1 Protein Homology CDS 185699 186397 . + 0 ID=cds-MCE2617864.1;Parent=gene-LVR01_00890;Dbxref=NCBI_GP:MCE2617864.1;Name=MCE2617864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398897.1;locus_tag=LVR01_00890;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MCE2617864.1;transl_table=11 JAJSBG010000001.1 Genbank gene 186417 187934 . + . ID=gene-LVR01_00895;Name=LVR01_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00895 JAJSBG010000001.1 Protein Homology CDS 186417 187934 . + 0 ID=cds-MCE2617865.1;Parent=gene-LVR01_00895;Dbxref=NCBI_GP:MCE2617865.1;Name=MCE2617865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477452.1;locus_tag=LVR01_00895;product=PTS transporter subunit EIIC;protein_id=MCE2617865.1;transl_table=11 JAJSBG010000001.1 Genbank gene 188058 189386 . + . ID=gene-LVR01_00900;Name=LVR01_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00900 JAJSBG010000001.1 Protein Homology CDS 188058 189386 . + 0 ID=cds-MCE2617866.1;Parent=gene-LVR01_00900;Dbxref=NCBI_GP:MCE2617866.1;Name=MCE2617866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672126.1;locus_tag=LVR01_00900;product=ABC transporter substrate-binding protein;protein_id=MCE2617866.1;transl_table=11 JAJSBG010000001.1 Genbank gene 189638 190504 . + . ID=gene-LVR01_00905;Name=LVR01_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00905 JAJSBG010000001.1 Protein Homology CDS 189638 190504 . + 0 ID=cds-MCE2617867.1;Parent=gene-LVR01_00905;Dbxref=NCBI_GP:MCE2617867.1;Name=MCE2617867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209417.1;locus_tag=LVR01_00905;product=sugar ABC transporter permease;protein_id=MCE2617867.1;transl_table=11 JAJSBG010000001.1 Genbank gene 190520 191359 . + . ID=gene-LVR01_00910;Name=LVR01_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00910 JAJSBG010000001.1 Protein Homology CDS 190520 191359 . + 0 ID=cds-MCE2617868.1;Parent=gene-LVR01_00910;Dbxref=NCBI_GP:MCE2617868.1;Name=MCE2617868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398901.1;locus_tag=LVR01_00910;product=carbohydrate ABC transporter permease;protein_id=MCE2617868.1;transl_table=11 JAJSBG010000001.1 Genbank gene 191587 192039 . + . ID=gene-LVR01_00915;Name=LVR01_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00915 JAJSBG010000001.1 Protein Homology CDS 191587 192039 . + 0 ID=cds-MCE2617869.1;Parent=gene-LVR01_00915;Dbxref=NCBI_GP:MCE2617869.1;Name=MCE2617869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000575445.1;locus_tag=LVR01_00915;product=YhcH/YjgK/YiaL family protein;protein_id=MCE2617869.1;transl_table=11 JAJSBG010000001.1 Genbank gene 192323 192517 . + . ID=gene-LVR01_00920;Name=LVR01_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00920 JAJSBG010000001.1 Protein Homology CDS 192323 192517 . + 0 ID=cds-MCE2617870.1;Parent=gene-LVR01_00920;Dbxref=NCBI_GP:MCE2617870.1;Name=MCE2617870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844411.1;locus_tag=LVR01_00920;product=hypothetical protein;protein_id=MCE2617870.1;transl_table=11 JAJSBG010000001.1 Genbank gene 192600 193244 . + . ID=gene-LVR01_00925;Name=LVR01_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00925 JAJSBG010000001.1 Protein Homology CDS 192600 193244 . + 0 ID=cds-MCE2617871.1;Parent=gene-LVR01_00925;Dbxref=NCBI_GP:MCE2617871.1;Name=MCE2617871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057467.1;locus_tag=LVR01_00925;product=YesL family protein;protein_id=MCE2617871.1;transl_table=11 JAJSBG010000001.1 Genbank gene 193414 194331 . + . ID=gene-LVR01_00930;Name=LVR01_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00930 JAJSBG010000001.1 Protein Homology CDS 193414 194331 . + 0 ID=cds-MCE2617872.1;Parent=gene-LVR01_00930;Dbxref=NCBI_GP:MCE2617872.1;Name=MCE2617872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894436.1;locus_tag=LVR01_00930;product=dihydrodipicolinate synthase family protein;protein_id=MCE2617872.1;transl_table=11 JAJSBG010000001.1 Genbank gene 194349 195233 . + . ID=gene-LVR01_00935;Name=LVR01_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00935 JAJSBG010000001.1 Protein Homology CDS 194349 195233 . + 0 ID=cds-MCE2617873.1;Parent=gene-LVR01_00935;Dbxref=NCBI_GP:MCE2617873.1;Name=MCE2617873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398633.1;locus_tag=LVR01_00935;product=ROK family protein;protein_id=MCE2617873.1;transl_table=11 JAJSBG010000001.1 Genbank gene 195330 195617 . + . ID=gene-LVR01_00940;Name=LVR01_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00940 JAJSBG010000001.1 Protein Homology CDS 195330 195617 . + 0 ID=cds-MCE2617874.1;Parent=gene-LVR01_00940;Dbxref=NCBI_GP:MCE2617874.1;Name=MCE2617874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951983.1;locus_tag=LVR01_00940;product=hypothetical protein;protein_id=MCE2617874.1;transl_table=11 JAJSBG010000001.1 Genbank gene 195607 195957 . + . ID=gene-LVR01_00945;Name=LVR01_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00945 JAJSBG010000001.1 Protein Homology CDS 195607 195957 . + 0 ID=cds-MCE2617875.1;Parent=gene-LVR01_00945;Dbxref=NCBI_GP:MCE2617875.1;Name=MCE2617875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384973.1;locus_tag=LVR01_00945;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCE2617875.1;transl_table=11 JAJSBG010000001.1 Genbank gene 196019 196870 . - . ID=gene-LVR01_00950;Name=LVR01_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00950 JAJSBG010000001.1 Protein Homology CDS 196019 196870 . - 0 ID=cds-MCE2617876.1;Parent=gene-LVR01_00950;Dbxref=NCBI_GP:MCE2617876.1;Name=MCE2617876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398632.1;locus_tag=LVR01_00950;product=MurR/RpiR family transcriptional regulator;protein_id=MCE2617876.1;transl_table=11 JAJSBG010000001.1 Genbank gene 197174 199231 . + . ID=gene-LVR01_00955;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=LVR01_00955 JAJSBG010000001.1 Protein Homology CDS 197174 199231 . + 0 ID=cds-MCE2617877.1;Parent=gene-LVR01_00955;Dbxref=NCBI_GP:MCE2617877.1;Name=MCE2617877.1;gbkey=CDS;gene=pbp2b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829432.1;locus_tag=LVR01_00955;product=penicillin-binding protein 2B;protein_id=MCE2617877.1;transl_table=11 JAJSBG010000001.1 Genbank gene 199242 199838 . + . ID=gene-LVR01_00960;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LVR01_00960 JAJSBG010000001.1 Protein Homology CDS 199242 199838 . + 0 ID=cds-MCE2617878.1;Parent=gene-LVR01_00960;Dbxref=NCBI_GP:MCE2617878.1;Name=MCE2617878.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=LVR01_00960;product=recombination mediator RecR;protein_id=MCE2617878.1;transl_table=11 JAJSBG010000001.1 Genbank gene 200015 201058 . + . ID=gene-LVR01_00965;Name=LVR01_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00965 JAJSBG010000001.1 Protein Homology CDS 200015 201058 . + 0 ID=cds-MCE2617879.1;Parent=gene-LVR01_00965;Dbxref=NCBI_GP:MCE2617879.1;Name=MCE2617879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814683.1;locus_tag=LVR01_00965;product=D-alanine--D-alanine ligase;protein_id=MCE2617879.1;transl_table=11 JAJSBG010000001.1 Genbank gene 201143 202516 . + . ID=gene-LVR01_00970;Name=LVR01_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00970 JAJSBG010000001.1 Protein Homology CDS 201143 202516 . + 0 ID=cds-MCE2617880.1;Parent=gene-LVR01_00970;Dbxref=NCBI_GP:MCE2617880.1;Name=MCE2617880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778685.1;locus_tag=LVR01_00970;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=MCE2617880.1;transl_table=11 JAJSBG010000001.1 Genbank gene 202503 203114 . + . ID=gene-LVR01_00975;Name=LVR01_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00975 JAJSBG010000001.1 Protein Homology CDS 202503 203114 . + 0 ID=cds-MCE2617881.1;Parent=gene-LVR01_00975;Dbxref=NCBI_GP:MCE2617881.1;Name=MCE2617881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863589.1;locus_tag=LVR01_00975;product=NUDIX hydrolase;protein_id=MCE2617881.1;transl_table=11 JAJSBG010000001.1 Genbank gene 203205 203909 . + . ID=gene-LVR01_00980;Name=LVR01_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00980 JAJSBG010000001.1 Protein Homology CDS 203205 203909 . + 0 ID=cds-MCE2617882.1;Parent=gene-LVR01_00980;Dbxref=NCBI_GP:MCE2617882.1;Name=MCE2617882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055242.1;locus_tag=LVR01_00980;product=TIGR02206 family membrane protein;protein_id=MCE2617882.1;transl_table=11 JAJSBG010000001.1 Genbank gene 204128 205501 . + . ID=gene-LVR01_00985;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LVR01_00985 JAJSBG010000001.1 Protein Homology CDS 204128 205501 . + 0 ID=cds-MCE2617883.1;Parent=gene-LVR01_00985;Dbxref=NCBI_GP:MCE2617883.1;Name=MCE2617883.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090410.1;locus_tag=LVR01_00985;product=cell division protein FtsA;protein_id=MCE2617883.1;transl_table=11 JAJSBG010000001.1 Genbank gene 205518 206777 . + . ID=gene-LVR01_00990;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LVR01_00990 JAJSBG010000001.1 Protein Homology CDS 205518 206777 . + 0 ID=cds-MCE2617884.1;Parent=gene-LVR01_00990;Dbxref=NCBI_GP:MCE2617884.1;Name=MCE2617884.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144288.1;locus_tag=LVR01_00990;product=cell division protein FtsZ;protein_id=MCE2617884.1;transl_table=11 JAJSBG010000001.1 Genbank gene 206782 207453 . + . ID=gene-LVR01_00995;Name=LVR01_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_00995 JAJSBG010000001.1 Protein Homology CDS 206782 207453 . + 0 ID=cds-MCE2617885.1;Parent=gene-LVR01_00995;Dbxref=NCBI_GP:MCE2617885.1;Name=MCE2617885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398115.1;locus_tag=LVR01_00995;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=MCE2617885.1;transl_table=11 JAJSBG010000001.1 Genbank gene 207463 208002 . + . ID=gene-LVR01_01000;Name=LVR01_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01000 JAJSBG010000001.1 Protein Homology CDS 207463 208002 . + 0 ID=cds-MCE2617886.1;Parent=gene-LVR01_01000;Dbxref=NCBI_GP:MCE2617886.1;Name=MCE2617886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053379.1;locus_tag=LVR01_01000;product=cell division protein SepF;protein_id=MCE2617886.1;transl_table=11 JAJSBG010000001.1 Genbank gene 208002 208265 . + . ID=gene-LVR01_01005;Name=LVR01_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01005 JAJSBG010000001.1 Protein Homology CDS 208002 208265 . + 0 ID=cds-MCE2617887.1;Parent=gene-LVR01_01005;Dbxref=NCBI_GP:MCE2617887.1;Name=MCE2617887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000576515.1;locus_tag=LVR01_01005;product=YggT family protein;protein_id=MCE2617887.1;transl_table=11 JAJSBG010000001.1 Genbank gene 208262 209047 . + . ID=gene-LVR01_01010;Name=LVR01_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01010 JAJSBG010000001.1 Protein Homology CDS 208262 209047 . + 0 ID=cds-MCE2617888.1;Parent=gene-LVR01_01010;Dbxref=NCBI_GP:MCE2617888.1;Name=MCE2617888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398113.1;locus_tag=LVR01_01010;product=RNA-binding protein;protein_id=MCE2617888.1;transl_table=11 JAJSBG010000001.1 Genbank pseudogene 209056 209842 . + . ID=gene-LVR01_01015;Name=divIVA;gbkey=Gene;gene=divIVA;gene_biotype=pseudogene;locus_tag=LVR01_01015;pseudo=true JAJSBG010000001.1 Protein Homology CDS 209056 209842 . + 0 ID=cds-LVR01_01015;Parent=gene-LVR01_01015;Note=frameshifted;gbkey=CDS;gene=divIVA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810114.1;locus_tag=LVR01_01015;product=cell division protein DivIVA;pseudo=true;transl_table=11 JAJSBG010000001.1 Genbank gene 210190 212982 . + . ID=gene-LVR01_01020;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LVR01_01020 JAJSBG010000001.1 Protein Homology CDS 210190 212982 . + 0 ID=cds-MCE2617889.1;Parent=gene-LVR01_01020;Dbxref=NCBI_GP:MCE2617889.1;Name=MCE2617889.1;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000155.1;locus_tag=LVR01_01020;product=isoleucine--tRNA ligase;protein_id=MCE2617889.1;transl_table=11 JAJSBG010000001.1 Genbank gene 213128 213820 . + . ID=gene-LVR01_01025;Name=LVR01_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01025 JAJSBG010000001.1 Protein Homology CDS 213128 213820 . + 0 ID=cds-MCE2617890.1;Parent=gene-LVR01_01025;Dbxref=NCBI_GP:MCE2617890.1;Name=MCE2617890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006703946.1;locus_tag=LVR01_01025;product=phosphoglycerate mutase;protein_id=MCE2617890.1;transl_table=11 JAJSBG010000001.1 Genbank gene 213939 214640 . + . ID=gene-LVR01_01030;Name=LVR01_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01030 JAJSBG010000001.1 Protein Homology CDS 213939 214640 . + 0 ID=cds-MCE2617891.1;Parent=gene-LVR01_01030;Dbxref=NCBI_GP:MCE2617891.1;Name=MCE2617891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399621.1;locus_tag=LVR01_01030;product=ABC transporter ATP-binding protein;protein_id=MCE2617891.1;transl_table=11 JAJSBG010000001.1 Genbank gene 214642 217350 . + . ID=gene-LVR01_01035;Name=LVR01_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01035 JAJSBG010000001.1 Protein Homology CDS 214642 217350 . + 0 ID=cds-MCE2617892.1;Parent=gene-LVR01_01035;Dbxref=NCBI_GP:MCE2617892.1;Name=MCE2617892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595876.1;locus_tag=LVR01_01035;product=FtsX-like permease family protein;protein_id=MCE2617892.1;transl_table=11 JAJSBG010000001.1 Genbank gene 217560 218051 . - . ID=gene-LVR01_01040;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LVR01_01040 JAJSBG010000001.1 Protein Homology CDS 217560 218051 . - 0 ID=cds-MCE2617893.1;Parent=gene-LVR01_01040;Dbxref=NCBI_GP:MCE2617893.1;Name=MCE2617893.1;gbkey=CDS;gene=tpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245092.1;locus_tag=LVR01_01040;product=thiol peroxidase;protein_id=MCE2617893.1;transl_table=11 JAJSBG010000001.1 Genbank gene 218174 219103 . - . ID=gene-LVR01_01045;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=LVR01_01045 JAJSBG010000001.1 Protein Homology CDS 218174 219103 . - 0 ID=cds-MCE2617894.1;Parent=gene-LVR01_01045;Dbxref=NCBI_GP:MCE2617894.1;Name=MCE2617894.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733059.1;locus_tag=LVR01_01045;product=metal ABC transporter substrate-binding lipoprotein/adhesin PsaA;protein_id=MCE2617894.1;transl_table=11 JAJSBG010000001.1 Genbank gene 219135 219983 . - . ID=gene-LVR01_01050;Name=LVR01_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01050 JAJSBG010000001.1 Protein Homology CDS 219135 219983 . - 0 ID=cds-MCE2617895.1;Parent=gene-LVR01_01050;Dbxref=NCBI_GP:MCE2617895.1;Name=MCE2617895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559784.1;locus_tag=LVR01_01050;product=metal ABC transporter permease;protein_id=MCE2617895.1;transl_table=11 JAJSBG010000001.1 Genbank gene 219980 220702 . - . ID=gene-LVR01_01055;Name=LVR01_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01055 JAJSBG010000001.1 Protein Homology CDS 219980 220702 . - 0 ID=cds-MCE2617896.1;Parent=gene-LVR01_01055;Dbxref=NCBI_GP:MCE2617896.1;Name=MCE2617896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000619140.1;locus_tag=LVR01_01055;product=metal ABC transporter ATP-binding protein;protein_id=MCE2617896.1;transl_table=11 JAJSBG010000001.1 Genbank gene 221180 222373 . - . ID=gene-LVR01_01060;Name=LVR01_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01060 JAJSBG010000001.1 Protein Homology CDS 221180 222373 . - 0 ID=cds-MCE2617897.1;Parent=gene-LVR01_01060;Dbxref=NCBI_GP:MCE2617897.1;Name=MCE2617897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081492.1;locus_tag=LVR01_01060;product=MFS transporter;protein_id=MCE2617897.1;transl_table=11 JAJSBG010000001.1 Genbank gene 222366 223481 . - . ID=gene-LVR01_01065;Name=LVR01_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01065 JAJSBG010000001.1 Protein Homology CDS 222366 223481 . - 0 ID=cds-MCE2617898.1;Parent=gene-LVR01_01065;Dbxref=NCBI_GP:MCE2617898.1;Name=MCE2617898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364967.1;locus_tag=LVR01_01065;product=ThiF family adenylyltransferase;protein_id=MCE2617898.1;transl_table=11 JAJSBG010000001.1 Genbank gene 223871 225763 . + . ID=gene-LVR01_01070;Name=pepO;gbkey=Gene;gene=pepO;gene_biotype=protein_coding;locus_tag=LVR01_01070 JAJSBG010000001.1 Protein Homology CDS 223871 225763 . + 0 ID=cds-MCE2617899.1;Parent=gene-LVR01_01070;Dbxref=NCBI_GP:MCE2617899.1;Name=MCE2617899.1;gbkey=CDS;gene=pepO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000199272.1;locus_tag=LVR01_01070;product=endopeptidase PepO;protein_id=MCE2617899.1;transl_table=11 JAJSBG010000001.1 Genbank gene 225946 226569 . + . ID=gene-LVR01_01075;Name=LVR01_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01075 JAJSBG010000001.1 Protein Homology CDS 225946 226569 . + 0 ID=cds-MCE2617900.1;Parent=gene-LVR01_01075;Dbxref=NCBI_GP:MCE2617900.1;Name=MCE2617900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081179.1;locus_tag=LVR01_01075;product=recombinase family protein;protein_id=MCE2617900.1;transl_table=11 JAJSBG010000001.1 Genbank gene 226997 229750 . + . ID=gene-LVR01_01080;Name=LVR01_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01080 JAJSBG010000001.1 Protein Homology CDS 226997 229750 . + 0 ID=cds-MCE2617901.1;Parent=gene-LVR01_01080;Dbxref=NCBI_GP:MCE2617901.1;Name=MCE2617901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038248.1;locus_tag=LVR01_01080;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2617901.1;transl_table=11 ##sequence-region JAJSBG010000020.1 1 38551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000020.1 Genbank region 1 38551 . + . ID=JAJSBG010000020.1:1..38551;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000020.1 Genbank gene 1 110 . + . ID=gene-LVR01_06500;Name=LVR01_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06500;partial=true;start_range=.,1 JAJSBG010000020.1 Protein Homology CDS 1 110 . + 2 ID=cds-MCE2618897.1;Parent=gene-LVR01_06500;Dbxref=NCBI_GP:MCE2618897.1;Name=MCE2618897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398897.1;locus_tag=LVR01_06500;partial=true;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MCE2618897.1;start_range=.,1;transl_table=11 JAJSBG010000020.1 Genbank gene 133 1056 . + . ID=gene-LVR01_06505;Name=LVR01_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06505 JAJSBG010000020.1 Protein Homology CDS 133 1056 . + 0 ID=cds-MCE2618898.1;Parent=gene-LVR01_06505;Dbxref=NCBI_GP:MCE2618898.1;Name=MCE2618898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687303.1;locus_tag=LVR01_06505;product=cyclically-permuted mutarotase family protein;protein_id=MCE2618898.1;transl_table=11 JAJSBG010000020.1 Genbank gene 1139 2056 . + . ID=gene-LVR01_06510;Name=LVR01_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06510 JAJSBG010000020.1 Protein Homology CDS 1139 2056 . + 0 ID=cds-MCE2618899.1;Parent=gene-LVR01_06510;Dbxref=NCBI_GP:MCE2618899.1;Name=MCE2618899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894436.1;locus_tag=LVR01_06510;product=N-acetylneuraminate lyase;protein_id=MCE2618899.1;transl_table=11 JAJSBG010000020.1 Genbank gene 2088 3629 . + . ID=gene-LVR01_06515;Name=LVR01_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06515 JAJSBG010000020.1 Protein Homology CDS 2088 3629 . + 0 ID=cds-MCE2618900.1;Parent=gene-LVR01_06515;Dbxref=NCBI_GP:MCE2618900.1;Name=MCE2618900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537364.1;locus_tag=LVR01_06515;product=sodium:solute symporter;protein_id=MCE2618900.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 3648 4104 . + . ID=gene-LVR01_06520;Name=LVR01_06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06520;pseudo=true JAJSBG010000020.1 Protein Homology CDS 3648 4104 . + 0 ID=cds-LVR01_06520;Parent=gene-LVR01_06520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587138.1;locus_tag=LVR01_06520;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 4503 5327 . + . ID=gene-LVR01_06525;Name=LVR01_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06525 JAJSBG010000020.1 Protein Homology CDS 4503 5327 . + 0 ID=cds-MCE2618901.1;Parent=gene-LVR01_06525;Dbxref=NCBI_GP:MCE2618901.1;Name=MCE2618901.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014967.2;locus_tag=LVR01_06525;product=hypothetical protein;protein_id=MCE2618901.1;transl_table=11 JAJSBG010000020.1 Genbank gene 5484 6032 . + . ID=gene-LVR01_06530;Name=LVR01_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06530 JAJSBG010000020.1 Protein Homology CDS 5484 6032 . + 0 ID=cds-MCE2618902.1;Parent=gene-LVR01_06530;Dbxref=NCBI_GP:MCE2618902.1;Name=MCE2618902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024488.2;locus_tag=LVR01_06530;product=exo-alpha-sialidase;protein_id=MCE2618902.1;transl_table=11 JAJSBG010000020.1 Genbank gene 6033 6326 . + . ID=gene-LVR01_06535;Name=LVR01_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06535 JAJSBG010000020.1 GeneMarkS-2+ CDS 6033 6326 . + 0 ID=cds-MCE2618903.1;Parent=gene-LVR01_06535;Dbxref=NCBI_GP:MCE2618903.1;Name=MCE2618903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06535;product=hypothetical protein;protein_id=MCE2618903.1;transl_table=11 JAJSBG010000020.1 Genbank gene 6366 7475 . + . ID=gene-LVR01_06540;Name=LVR01_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06540 JAJSBG010000020.1 Protein Homology CDS 6366 7475 . + 0 ID=cds-MCE2618904.1;Parent=gene-LVR01_06540;Dbxref=NCBI_GP:MCE2618904.1;Name=MCE2618904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248711.1;locus_tag=LVR01_06540;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCE2618904.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 7585 8376 . + . ID=gene-LVR01_06545;Name=LVR01_06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06545;pseudo=true JAJSBG010000020.1 Protein Homology CDS 7585 8376 . + 0 ID=cds-LVR01_06545;Parent=gene-LVR01_06545;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_06545;product=IS5 family transposase;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 8479 9226 . + . ID=gene-LVR01_06550;Name=LVR01_06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06550;pseudo=true JAJSBG010000020.1 Protein Homology CDS 8479 9226 . + 0 ID=cds-LVR01_06550;Parent=gene-LVR01_06550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691258.1;locus_tag=LVR01_06550;product=ROK family protein;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 9251 9574 . + . ID=gene-LVR01_06555;Name=LVR01_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06555 JAJSBG010000020.1 Protein Homology CDS 9251 9574 . + 0 ID=cds-MCE2618905.1;Parent=gene-LVR01_06555;Dbxref=NCBI_GP:MCE2618905.1;Name=MCE2618905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185366.1;locus_tag=LVR01_06555;product=hypothetical protein;protein_id=MCE2618905.1;transl_table=11 JAJSBG010000020.1 Genbank gene 9564 11555 . + . ID=gene-LVR01_06560;Name=LVR01_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06560 JAJSBG010000020.1 Protein Homology CDS 9564 11555 . + 0 ID=cds-MCE2618906.1;Parent=gene-LVR01_06560;Dbxref=NCBI_GP:MCE2618906.1;Name=MCE2618906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018351.1;locus_tag=LVR01_06560;product=V-type ATP synthase subunit I;protein_id=MCE2618906.1;transl_table=11 JAJSBG010000020.1 Genbank gene 11571 12047 . + . ID=gene-LVR01_06565;Name=LVR01_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06565 JAJSBG010000020.1 Protein Homology CDS 11571 12047 . + 0 ID=cds-MCE2618907.1;Parent=gene-LVR01_06565;Dbxref=NCBI_GP:MCE2618907.1;Name=MCE2618907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400486.1;locus_tag=LVR01_06565;product=V-type ATP synthase subunit K;protein_id=MCE2618907.1;transl_table=11 JAJSBG010000020.1 Genbank gene 12081 12662 . + . ID=gene-LVR01_06570;Name=LVR01_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06570 JAJSBG010000020.1 Protein Homology CDS 12081 12662 . + 0 ID=cds-MCE2618908.1;Parent=gene-LVR01_06570;Dbxref=NCBI_GP:MCE2618908.1;Name=MCE2618908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067169.1;locus_tag=LVR01_06570;product=hypothetical protein;protein_id=MCE2618908.1;transl_table=11 JAJSBG010000020.1 Genbank gene 12727 13734 . + . ID=gene-LVR01_06575;Name=LVR01_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06575 JAJSBG010000020.1 Protein Homology CDS 12727 13734 . + 0 ID=cds-MCE2618909.1;Parent=gene-LVR01_06575;Dbxref=NCBI_GP:MCE2618909.1;Name=MCE2618909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380539.1;locus_tag=LVR01_06575;product=V-type ATPase subunit;protein_id=MCE2618909.1;transl_table=11 JAJSBG010000020.1 Genbank gene 13724 14044 . + . ID=gene-LVR01_06580;Name=LVR01_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06580 JAJSBG010000020.1 Protein Homology CDS 13724 14044 . + 0 ID=cds-MCE2618910.1;Parent=gene-LVR01_06580;Dbxref=NCBI_GP:MCE2618910.1;Name=MCE2618910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387939.1;locus_tag=LVR01_06580;product=V-type ATP synthase subunit F;protein_id=MCE2618910.1;transl_table=11 JAJSBG010000020.1 Genbank gene 14107 15882 . + . ID=gene-LVR01_06585;Name=LVR01_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06585 JAJSBG010000020.1 Protein Homology CDS 14107 15882 . + 0 ID=cds-MCE2618911.1;Parent=gene-LVR01_06585;Dbxref=NCBI_GP:MCE2618911.1;Name=MCE2618911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011017275.1;locus_tag=LVR01_06585;product=V-type ATP synthase subunit A;protein_id=MCE2618911.1;transl_table=11 JAJSBG010000020.1 Genbank gene 15883 17268 . + . ID=gene-LVR01_06590;Name=LVR01_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06590 JAJSBG010000020.1 Protein Homology CDS 15883 17268 . + 0 ID=cds-MCE2618912.1;Parent=gene-LVR01_06590;Dbxref=NCBI_GP:MCE2618912.1;Name=MCE2618912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000111247.1;locus_tag=LVR01_06590;product=V-type ATP synthase subunit B;protein_id=MCE2618912.1;transl_table=11 JAJSBG010000020.1 Genbank gene 17291 17902 . + . ID=gene-LVR01_06595;Name=LVR01_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06595 JAJSBG010000020.1 Protein Homology CDS 17291 17902 . + 0 ID=cds-MCE2618913.1;Parent=gene-LVR01_06595;Dbxref=NCBI_GP:MCE2618913.1;Name=MCE2618913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251933.1;locus_tag=LVR01_06595;product=V-type ATP synthase subunit D;protein_id=MCE2618913.1;transl_table=11 JAJSBG010000020.1 Genbank gene 18506 19204 . + . ID=gene-LVR01_06600;Name=LVR01_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06600 JAJSBG010000020.1 Protein Homology CDS 18506 19204 . + 0 ID=cds-MCE2618914.1;Parent=gene-LVR01_06600;Dbxref=NCBI_GP:MCE2618914.1;Name=MCE2618914.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013094.2;locus_tag=LVR01_06600;product=ThiF family adenylyltransferase;protein_id=MCE2618914.1;transl_table=11 JAJSBG010000020.1 Genbank gene 19209 19589 . + . ID=gene-LVR01_06605;Name=LVR01_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06605 JAJSBG010000020.1 Protein Homology CDS 19209 19589 . + 0 ID=cds-MCE2618915.1;Parent=gene-LVR01_06605;Dbxref=NCBI_GP:MCE2618915.1;Name=MCE2618915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654343.1;locus_tag=LVR01_06605;product=hypothetical protein;protein_id=MCE2618915.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 19793 20648 . + . ID=gene-LVR01_06610;Name=LVR01_06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06610;pseudo=true JAJSBG010000020.1 Protein Homology CDS 19793 20648 . + 0 ID=cds-LVR01_06610;Parent=gene-LVR01_06610;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061739.1;locus_tag=LVR01_06610;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 20641 21354 . + . ID=gene-LVR01_06615;Name=LVR01_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06615 JAJSBG010000020.1 Protein Homology CDS 20641 21354 . + 0 ID=cds-MCE2618916.1;Parent=gene-LVR01_06615;Dbxref=NCBI_GP:MCE2618916.1;Name=MCE2618916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303284.1;locus_tag=LVR01_06615;product=ABC transporter permease;protein_id=MCE2618916.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 21700 21792 . - . ID=gene-LVR01_06620;Name=LVR01_06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06620;pseudo=true JAJSBG010000020.1 Protein Homology CDS 21700 21792 . - 0 ID=cds-LVR01_06620;Parent=gene-LVR01_06620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516271.1;locus_tag=LVR01_06620;product=IS30 family transposase;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 22111 22812 . + . ID=gene-LVR01_06625;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LVR01_06625 JAJSBG010000020.1 Protein Homology CDS 22111 22812 . + 0 ID=cds-MCE2618917.1;Parent=gene-LVR01_06625;Dbxref=NCBI_GP:MCE2618917.1;Name=MCE2618917.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206708.1;locus_tag=LVR01_06625;product=orotidine-5'-phosphate decarboxylase;protein_id=MCE2618917.1;transl_table=11 JAJSBG010000020.1 Genbank gene 22846 23478 . + . ID=gene-LVR01_06630;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LVR01_06630 JAJSBG010000020.1 Protein Homology CDS 22846 23478 . + 0 ID=cds-MCE2618918.1;Parent=gene-LVR01_06630;Dbxref=NCBI_GP:MCE2618918.1;Name=MCE2618918.1;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466611.1;locus_tag=LVR01_06630;product=orotate phosphoribosyltransferase;protein_id=MCE2618918.1;transl_table=11 JAJSBG010000020.1 Genbank gene 23864 25354 . + . ID=gene-LVR01_06635;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LVR01_06635 JAJSBG010000020.1 Protein Homology CDS 23864 25354 . + 0 ID=cds-MCE2618919.1;Parent=gene-LVR01_06635;Dbxref=NCBI_GP:MCE2618919.1;Name=MCE2618919.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003055423.1;locus_tag=LVR01_06635;product=lysine--tRNA ligase;protein_id=MCE2618919.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 25494 26375 . - . ID=gene-LVR01_06640;Name=LVR01_06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06640;pseudo=true JAJSBG010000020.1 Protein Homology CDS 25494 26375 . - 0 ID=cds-LVR01_06640;Parent=gene-LVR01_06640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632353.1;locus_tag=LVR01_06640;product=transposase;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 26441 29074 . + . ID=gene-LVR01_06645;Name=LVR01_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06645 JAJSBG010000020.1 Protein Homology CDS 26441 29074 . + 0 ID=cds-MCE2618920.1;Parent=gene-LVR01_06645;Dbxref=NCBI_GP:MCE2618920.1;Name=MCE2618920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000847727.1;locus_tag=LVR01_06645;product=sensor histidine kinase KdpD;protein_id=MCE2618920.1;transl_table=11 JAJSBG010000020.1 Genbank gene 29064 29789 . + . ID=gene-LVR01_06650;Name=LVR01_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06650 JAJSBG010000020.1 Protein Homology CDS 29064 29789 . + 0 ID=cds-MCE2618921.1;Parent=gene-LVR01_06650;Dbxref=NCBI_GP:MCE2618921.1;Name=MCE2618921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046299.1;locus_tag=LVR01_06650;product=response regulator transcription factor;protein_id=MCE2618921.1;transl_table=11 JAJSBG010000020.1 Genbank gene 30089 30166 . + . ID=gene-LVR01_06655;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LVR01_06655 JAJSBG010000020.1 Protein Homology CDS 30089 30166 . + 0 ID=cds-MCE2618922.1;Parent=gene-LVR01_06655;Dbxref=NCBI_GP:MCE2618922.1;Name=MCE2618922.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: protein motif:HMM:NF021144.2;locus_tag=LVR01_06655;product=K(+)-transporting ATPase subunit F;protein_id=MCE2618922.1;transl_table=11 JAJSBG010000020.1 Genbank gene 30179 31924 . + . ID=gene-LVR01_06660;Name=LVR01_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06660 JAJSBG010000020.1 Protein Homology CDS 30179 31924 . + 0 ID=cds-MCE2618923.1;Parent=gene-LVR01_06660;Dbxref=NCBI_GP:MCE2618923.1;Name=MCE2618923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893148.1;locus_tag=LVR01_06660;product=potassium-transporting ATPase subunit KdpA;protein_id=MCE2618923.1;transl_table=11 JAJSBG010000020.1 Genbank gene 31933 34002 . + . ID=gene-LVR01_06665;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LVR01_06665 JAJSBG010000020.1 Protein Homology CDS 31933 34002 . + 0 ID=cds-MCE2618924.1;Parent=gene-LVR01_06665;Dbxref=NCBI_GP:MCE2618924.1;Name=MCE2618924.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893144.1;locus_tag=LVR01_06665;product=potassium-transporting ATPase subunit KdpB;protein_id=MCE2618924.1;transl_table=11 JAJSBG010000020.1 Genbank gene 34127 34744 . + . ID=gene-LVR01_06670;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LVR01_06670 JAJSBG010000020.1 Protein Homology CDS 34127 34744 . + 0 ID=cds-MCE2618925.1;Parent=gene-LVR01_06670;Dbxref=NCBI_GP:MCE2618925.1;Name=MCE2618925.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001225808.1;locus_tag=LVR01_06670;product=potassium-transporting ATPase subunit KdpC;protein_id=MCE2618925.1;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 35197 35489 . - . ID=gene-LVR01_06675;Name=LVR01_06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06675;pseudo=true JAJSBG010000020.1 Protein Homology CDS 35197 35489 . - 0 ID=cds-LVR01_06675;Parent=gene-LVR01_06675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=LVR01_06675;product=ISNCY family transposase;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 35907 37137 . + . ID=gene-LVR01_06680;Name=LVR01_06680;end_range=37137,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06680;partial=true JAJSBG010000020.1 Protein Homology CDS 35907 37137 . + 0 ID=cds-MCE2618926.1;Parent=gene-LVR01_06680;Dbxref=NCBI_GP:MCE2618926.1;Name=MCE2618926.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;end_range=37137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019780939.1;locus_tag=LVR01_06680;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2618926.1;transl_table=11 JAJSBG010000020.1 Genbank gene 37238 37641 . + . ID=gene-LVR01_06685;Name=LVR01_06685;end_range=37641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06685;partial=true;start_range=.,37238 JAJSBG010000020.1 Protein Homology CDS 37238 37641 . + 2 ID=cds-MCE2618927.1;Parent=gene-LVR01_06685;Dbxref=NCBI_GP:MCE2618927.1;Name=MCE2618927.1;end_range=37641,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LVR01_06685;partial=true;product=DUF1542 domain-containing protein;protein_id=MCE2618927.1;start_range=.,37238;transl_table=11 JAJSBG010000020.1 Genbank gene 37742 37921 . + . ID=gene-LVR01_06690;Name=LVR01_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06690;partial=true;start_range=.,37742 JAJSBG010000020.1 Protein Homology CDS 37742 37921 . + 0 ID=cds-MCE2618928.1;Parent=gene-LVR01_06690;Dbxref=NCBI_GP:MCE2618928.1;Name=MCE2618928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237576.1;locus_tag=LVR01_06690;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2618928.1;start_range=.,37742;transl_table=11 JAJSBG010000020.1 Genbank pseudogene 38075 38260 . - . ID=gene-LVR01_06695;Name=LVR01_06695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06695;pseudo=true JAJSBG010000020.1 Protein Homology CDS 38075 38260 . - 0 ID=cds-LVR01_06695;Parent=gene-LVR01_06695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632353.1;locus_tag=LVR01_06695;product=transposase;pseudo=true;transl_table=11 JAJSBG010000020.1 Genbank gene 38288 38551 . + . ID=gene-LVR01_06700;Name=LVR01_06700;end_range=38551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06700;partial=true JAJSBG010000020.1 Protein Homology CDS 38288 38551 . + 0 ID=cds-MCE2618929.1;Parent=gene-LVR01_06700;Dbxref=NCBI_GP:MCE2618929.1;Name=MCE2618929.1;end_range=38551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_06700;partial=true;product=IS630 family transposase;protein_id=MCE2618929.1;transl_table=11 ##sequence-region JAJSBG010000021.1 1 37669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000021.1 Genbank region 1 37669 . + . ID=JAJSBG010000021.1:1..37669;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000021.1 Genbank gene 94 564 . - . ID=gene-LVR01_06705;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LVR01_06705 JAJSBG010000021.1 Protein Homology CDS 94 564 . - 0 ID=cds-MCE2618930.1;Parent=gene-LVR01_06705;Dbxref=NCBI_GP:MCE2618930.1;Name=MCE2618930.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849618.1;locus_tag=LVR01_06705;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=MCE2618930.1;transl_table=11 JAJSBG010000021.1 Genbank gene 642 1175 . - . ID=gene-LVR01_06710;Name=LVR01_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06710 JAJSBG010000021.1 Protein Homology CDS 642 1175 . - 0 ID=cds-MCE2618931.1;Parent=gene-LVR01_06710;Dbxref=NCBI_GP:MCE2618931.1;Name=MCE2618931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399110.1;locus_tag=LVR01_06710;product=ABC transporter permease;protein_id=MCE2618931.1;transl_table=11 JAJSBG010000021.1 Genbank gene 1236 2522 . - . ID=gene-LVR01_06715;Name=LVR01_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06715 JAJSBG010000021.1 Protein Homology CDS 1236 2522 . - 0 ID=cds-MCE2618932.1;Parent=gene-LVR01_06715;Dbxref=NCBI_GP:MCE2618932.1;Name=MCE2618932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278884.1;locus_tag=LVR01_06715;product=response regulator transcription factor;protein_id=MCE2618932.1;transl_table=11 JAJSBG010000021.1 Genbank gene 2534 4180 . - . ID=gene-LVR01_06720;Name=LVR01_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06720 JAJSBG010000021.1 Protein Homology CDS 2534 4180 . - 0 ID=cds-MCE2618933.1;Parent=gene-LVR01_06720;Dbxref=NCBI_GP:MCE2618933.1;Name=MCE2618933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670288.1;locus_tag=LVR01_06720;product=sensor histidine kinase;protein_id=MCE2618933.1;transl_table=11 JAJSBG010000021.1 Genbank gene 4182 4796 . - . ID=gene-LVR01_06725;Name=LVR01_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06725 JAJSBG010000021.1 Protein Homology CDS 4182 4796 . - 0 ID=cds-MCE2618934.1;Parent=gene-LVR01_06725;Dbxref=NCBI_GP:MCE2618934.1;Name=MCE2618934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532354.1;locus_tag=LVR01_06725;product=DUF624 domain-containing protein;protein_id=MCE2618934.1;transl_table=11 JAJSBG010000021.1 Genbank gene 4931 5500 . + . ID=gene-LVR01_06730;Name=LVR01_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06730 JAJSBG010000021.1 Protein Homology CDS 4931 5500 . + 0 ID=cds-MCE2618935.1;Parent=gene-LVR01_06730;Dbxref=NCBI_GP:MCE2618935.1;Name=MCE2618935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748387.1;locus_tag=LVR01_06730;product=MptD family putative ECF transporter S component;protein_id=MCE2618935.1;transl_table=11 JAJSBG010000021.1 Genbank pseudogene 5696 5914 . - . ID=gene-LVR01_06735;Name=LVR01_06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_06735;pseudo=true JAJSBG010000021.1 Protein Homology CDS 5696 5914 . - 0 ID=cds-LVR01_06735;Parent=gene-LVR01_06735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255001.1;locus_tag=LVR01_06735;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000021.1 Genbank gene 5937 7181 . - . ID=gene-LVR01_06740;Name=LVR01_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06740 JAJSBG010000021.1 Protein Homology CDS 5937 7181 . - 0 ID=cds-MCE2618936.1;Parent=gene-LVR01_06740;Dbxref=NCBI_GP:MCE2618936.1;Name=MCE2618936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014287.1;locus_tag=LVR01_06740;product=transporter;protein_id=MCE2618936.1;transl_table=11 JAJSBG010000021.1 Genbank gene 7367 8236 . - . ID=gene-LVR01_06745;Name=LVR01_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06745 JAJSBG010000021.1 Protein Homology CDS 7367 8236 . - 0 ID=cds-MCE2618937.1;Parent=gene-LVR01_06745;Dbxref=NCBI_GP:MCE2618937.1;Name=MCE2618937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180343.1;locus_tag=LVR01_06745;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=MCE2618937.1;transl_table=11 JAJSBG010000021.1 Genbank gene 8366 9058 . - . ID=gene-LVR01_06750;Name=LVR01_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06750 JAJSBG010000021.1 Protein Homology CDS 8366 9058 . - 0 ID=cds-MCE2618938.1;Parent=gene-LVR01_06750;Dbxref=NCBI_GP:MCE2618938.1;Name=MCE2618938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255001.1;locus_tag=LVR01_06750;product=ABC transporter permease;protein_id=MCE2618938.1;transl_table=11 JAJSBG010000021.1 Genbank gene 9060 10121 . - . ID=gene-LVR01_06755;Name=LVR01_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06755 JAJSBG010000021.1 Protein Homology CDS 9060 10121 . - 0 ID=cds-MCE2618939.1;Parent=gene-LVR01_06755;Dbxref=NCBI_GP:MCE2618939.1;Name=MCE2618939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085652.1;locus_tag=LVR01_06755;product=methionine ABC transporter ATP-binding protein;protein_id=MCE2618939.1;transl_table=11 JAJSBG010000021.1 Genbank gene 10114 11487 . - . ID=gene-LVR01_06760;Name=LVR01_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06760 JAJSBG010000021.1 Protein Homology CDS 10114 11487 . - 0 ID=cds-MCE2618940.1;Parent=gene-LVR01_06760;Dbxref=NCBI_GP:MCE2618940.1;Name=MCE2618940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255000.1;locus_tag=LVR01_06760;product=M20/M25/M40 family metallo-hydrolase;protein_id=MCE2618940.1;transl_table=11 JAJSBG010000021.1 Genbank gene 11584 12438 . - . ID=gene-LVR01_06765;Name=LVR01_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06765 JAJSBG010000021.1 Protein Homology CDS 11584 12438 . - 0 ID=cds-MCE2618941.1;Parent=gene-LVR01_06765;Dbxref=NCBI_GP:MCE2618941.1;Name=MCE2618941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694494.1;locus_tag=LVR01_06765;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=MCE2618941.1;transl_table=11 JAJSBG010000021.1 Genbank gene 12592 13422 . - . ID=gene-LVR01_06770;Name=LVR01_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06770 JAJSBG010000021.1 Protein Homology CDS 12592 13422 . - 0 ID=cds-MCE2618942.1;Parent=gene-LVR01_06770;Dbxref=NCBI_GP:MCE2618942.1;Name=MCE2618942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397236.1;locus_tag=LVR01_06770;product=amino acid ABC transporter substrate-binding protein;protein_id=MCE2618942.1;transl_table=11 JAJSBG010000021.1 Genbank gene 13517 13660 . + . ID=gene-LVR01_06775;Name=LVR01_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06775 JAJSBG010000021.1 GeneMarkS-2+ CDS 13517 13660 . + 0 ID=cds-MCE2618943.1;Parent=gene-LVR01_06775;Dbxref=NCBI_GP:MCE2618943.1;Name=MCE2618943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_06775;product=hypothetical protein;protein_id=MCE2618943.1;transl_table=11 JAJSBG010000021.1 Genbank gene 13679 14002 . - . ID=gene-LVR01_06780;Name=LVR01_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06780 JAJSBG010000021.1 Protein Homology CDS 13679 14002 . - 0 ID=cds-MCE2618944.1;Parent=gene-LVR01_06780;Dbxref=NCBI_GP:MCE2618944.1;Name=MCE2618944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253911.1;locus_tag=LVR01_06780;product=AzlD domain-containing protein;protein_id=MCE2618944.1;transl_table=11 JAJSBG010000021.1 Genbank gene 13992 14687 . - . ID=gene-LVR01_06785;Name=LVR01_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06785 JAJSBG010000021.1 Protein Homology CDS 13992 14687 . - 0 ID=cds-MCE2618945.1;Parent=gene-LVR01_06785;Dbxref=NCBI_GP:MCE2618945.1;Name=MCE2618945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466402.1;locus_tag=LVR01_06785;product=AzlC family ABC transporter permease;protein_id=MCE2618945.1;transl_table=11 JAJSBG010000021.1 Genbank gene 14846 16072 . - . ID=gene-LVR01_06790;Name=LVR01_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06790 JAJSBG010000021.1 Protein Homology CDS 14846 16072 . - 0 ID=cds-MCE2618946.1;Parent=gene-LVR01_06790;Dbxref=NCBI_GP:MCE2618946.1;Name=MCE2618946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862399.1;locus_tag=LVR01_06790;product=MFS transporter;protein_id=MCE2618946.1;transl_table=11 JAJSBG010000021.1 Genbank gene 16144 16809 . - . ID=gene-LVR01_06795;Name=LVR01_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06795 JAJSBG010000021.1 Protein Homology CDS 16144 16809 . - 0 ID=cds-MCE2618947.1;Parent=gene-LVR01_06795;Dbxref=NCBI_GP:MCE2618947.1;Name=MCE2618947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720786.1;locus_tag=LVR01_06795;product=CPBP family intramembrane metalloprotease;protein_id=MCE2618947.1;transl_table=11 JAJSBG010000021.1 Genbank gene 16876 17073 . - . ID=gene-LVR01_06800;Name=LVR01_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06800 JAJSBG010000021.1 Protein Homology CDS 16876 17073 . - 0 ID=cds-MCE2618948.1;Parent=gene-LVR01_06800;Dbxref=NCBI_GP:MCE2618948.1;Name=MCE2618948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933470.1;locus_tag=LVR01_06800;product=peptide pheromone VP1;protein_id=MCE2618948.1;transl_table=11 JAJSBG010000021.1 Genbank gene 17363 18226 . - . ID=gene-LVR01_06805;Name=LVR01_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06805 JAJSBG010000021.1 Protein Homology CDS 17363 18226 . - 0 ID=cds-MCE2618949.1;Parent=gene-LVR01_06805;Dbxref=NCBI_GP:MCE2618949.1;Name=MCE2618949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572848.1;locus_tag=LVR01_06805;product=XRE/MutR family transcriptional regulator;protein_id=MCE2618949.1;transl_table=11 JAJSBG010000021.1 Genbank gene 18331 19341 . - . ID=gene-LVR01_06810;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LVR01_06810 JAJSBG010000021.1 Protein Homology CDS 18331 19341 . - 0 ID=cds-MCE2618950.1;Parent=gene-LVR01_06810;Dbxref=NCBI_GP:MCE2618950.1;Name=MCE2618950.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896630.1;locus_tag=LVR01_06810;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MCE2618950.1;transl_table=11 JAJSBG010000021.1 Genbank gene 19331 19768 . - . ID=gene-LVR01_06815;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LVR01_06815 JAJSBG010000021.1 Protein Homology CDS 19331 19768 . - 0 ID=cds-MCE2618951.1;Parent=gene-LVR01_06815;Dbxref=NCBI_GP:MCE2618951.1;Name=MCE2618951.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569806.1;locus_tag=LVR01_06815;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=MCE2618951.1;transl_table=11 JAJSBG010000021.1 Genbank gene 19765 20448 . - . ID=gene-LVR01_06820;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LVR01_06820 JAJSBG010000021.1 Protein Homology CDS 19765 20448 . - 0 ID=cds-MCE2618952.1;Parent=gene-LVR01_06820;Dbxref=NCBI_GP:MCE2618952.1;Name=MCE2618952.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865689.1;locus_tag=LVR01_06820;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MCE2618952.1;transl_table=11 JAJSBG010000021.1 Genbank gene 20624 20809 . + . ID=gene-LVR01_06825;Name=cibA;gbkey=Gene;gene=cibA;gene_biotype=protein_coding;locus_tag=LVR01_06825 JAJSBG010000021.1 Protein Homology CDS 20624 20809 . + 0 ID=cds-MCE2618953.1;Parent=gene-LVR01_06825;Dbxref=NCBI_GP:MCE2618953.1;Name=MCE2618953.1;gbkey=CDS;gene=cibA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180803.1;locus_tag=LVR01_06825;product=fratricide two-peptide bacteriocin subunit CibA;protein_id=MCE2618953.1;transl_table=11 JAJSBG010000021.1 Genbank gene 20811 20963 . + . ID=gene-LVR01_06830;Name=cibB;gbkey=Gene;gene=cibB;gene_biotype=protein_coding;locus_tag=LVR01_06830 JAJSBG010000021.1 Protein Homology CDS 20811 20963 . + 0 ID=cds-MCE2618954.1;Parent=gene-LVR01_06830;Dbxref=NCBI_GP:MCE2618954.1;Name=MCE2618954.1;gbkey=CDS;gene=cibB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000977347.1;locus_tag=LVR01_06830;product=fratricide two-peptide bacteriocin subunit CibB;protein_id=MCE2618954.1;transl_table=11 JAJSBG010000021.1 Genbank gene 21285 21500 . - . ID=gene-LVR01_06835;Name=LVR01_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06835 JAJSBG010000021.1 Protein Homology CDS 21285 21500 . - 0 ID=cds-MCE2618955.1;Parent=gene-LVR01_06835;Dbxref=NCBI_GP:MCE2618955.1;Name=MCE2618955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282487.1;locus_tag=LVR01_06835;product=hypothetical protein;protein_id=MCE2618955.1;transl_table=11 JAJSBG010000021.1 Genbank gene 21780 22013 . + . ID=gene-LVR01_06840;Name=LVR01_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06840 JAJSBG010000021.1 Protein Homology CDS 21780 22013 . + 0 ID=cds-MCE2618956.1;Parent=gene-LVR01_06840;Dbxref=NCBI_GP:MCE2618956.1;Name=MCE2618956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639444.1;locus_tag=LVR01_06840;product=DNA-dependent RNA polymerase auxiliary subunit epsilon family protein;protein_id=MCE2618956.1;transl_table=11 JAJSBG010000021.1 Genbank gene 22015 23694 . + . ID=gene-LVR01_06845;Name=LVR01_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06845 JAJSBG010000021.1 Protein Homology CDS 22015 23694 . + 0 ID=cds-MCE2618957.1;Parent=gene-LVR01_06845;Dbxref=NCBI_GP:MCE2618957.1;Name=MCE2618957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729634.1;locus_tag=LVR01_06845;product=ribonuclease J;protein_id=MCE2618957.1;transl_table=11 JAJSBG010000021.1 Genbank gene 24230 26143 . - . ID=gene-LVR01_06850;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LVR01_06850 JAJSBG010000021.1 Protein Homology CDS 24230 26143 . - 0 ID=cds-MCE2618958.1;Parent=gene-LVR01_06850;Dbxref=NCBI_GP:MCE2618958.1;Name=MCE2618958.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221902.1;locus_tag=LVR01_06850;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=MCE2618958.1;transl_table=11 JAJSBG010000021.1 Genbank gene 26153 26608 . - . ID=gene-LVR01_06855;Name=LVR01_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06855 JAJSBG010000021.1 Protein Homology CDS 26153 26608 . - 0 ID=cds-MCE2618959.1;Parent=gene-LVR01_06855;Dbxref=NCBI_GP:MCE2618959.1;Name=MCE2618959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398431.1;locus_tag=LVR01_06855;product=NUDIX hydrolase;protein_id=MCE2618959.1;transl_table=11 JAJSBG010000021.1 Genbank gene 26749 27870 . - . ID=gene-LVR01_06860;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LVR01_06860 JAJSBG010000021.1 Protein Homology CDS 26749 27870 . - 0 ID=cds-MCE2618960.1;Parent=gene-LVR01_06860;Dbxref=NCBI_GP:MCE2618960.1;Name=MCE2618960.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153390.1;locus_tag=LVR01_06860;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MCE2618960.1;transl_table=11 JAJSBG010000021.1 Genbank gene 28572 28874 . - . ID=gene-LVR01_06865;Name=LVR01_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06865 JAJSBG010000021.1 Protein Homology CDS 28572 28874 . - 0 ID=cds-MCE2618961.1;Parent=gene-LVR01_06865;Dbxref=NCBI_GP:MCE2618961.1;Name=MCE2618961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424403.1;locus_tag=LVR01_06865;product=hypothetical protein;protein_id=MCE2618961.1;transl_table=11 JAJSBG010000021.1 Genbank gene 29019 30371 . - . ID=gene-LVR01_06870;Name=LVR01_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06870 JAJSBG010000021.1 Protein Homology CDS 29019 30371 . - 0 ID=cds-MCE2618962.1;Parent=gene-LVR01_06870;Dbxref=NCBI_GP:MCE2618962.1;Name=MCE2618962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865356.1;locus_tag=LVR01_06870;product=HlyD family secretion protein;protein_id=MCE2618962.1;transl_table=11 JAJSBG010000021.1 Genbank gene 30368 30835 . - . ID=gene-LVR01_06875;Name=LVR01_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06875 JAJSBG010000021.1 Protein Homology CDS 30368 30835 . - 0 ID=cds-MCE2618963.1;Parent=gene-LVR01_06875;Dbxref=NCBI_GP:MCE2618963.1;Name=MCE2618963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096140.1;locus_tag=LVR01_06875;product=AraC family transcriptional regulator;protein_id=MCE2618963.1;transl_table=11 JAJSBG010000021.1 Genbank gene 30828 33047 . - . ID=gene-LVR01_06880;Name=LVR01_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06880 JAJSBG010000021.1 Protein Homology CDS 30828 33047 . - 0 ID=cds-MCE2618964.1;Parent=gene-LVR01_06880;Dbxref=NCBI_GP:MCE2618964.1;Name=MCE2618964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856353.1;locus_tag=LVR01_06880;product=peptidase domain-containing ABC transporter;protein_id=MCE2618964.1;transl_table=11 JAJSBG010000021.1 Genbank gene 33513 34376 . + . ID=gene-LVR01_06885;Name=LVR01_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06885 JAJSBG010000021.1 Protein Homology CDS 33513 34376 . + 0 ID=cds-MCE2618965.1;Parent=gene-LVR01_06885;Dbxref=NCBI_GP:MCE2618965.1;Name=MCE2618965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268160.1;locus_tag=LVR01_06885;product=helix-turn-helix transcriptional regulator;protein_id=MCE2618965.1;transl_table=11 JAJSBG010000021.1 Genbank gene 34428 35015 . - . ID=gene-LVR01_06890;Name=LVR01_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06890 JAJSBG010000021.1 Protein Homology CDS 34428 35015 . - 0 ID=cds-MCE2618966.1;Parent=gene-LVR01_06890;Dbxref=NCBI_GP:MCE2618966.1;Name=MCE2618966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843467.1;locus_tag=LVR01_06890;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MCE2618966.1;transl_table=11 JAJSBG010000021.1 Genbank gene 35256 35927 . + . ID=gene-LVR01_06895;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=LVR01_06895 JAJSBG010000021.1 Protein Homology CDS 35256 35927 . + 0 ID=cds-MCE2618967.1;Parent=gene-LVR01_06895;Dbxref=NCBI_GP:MCE2618967.1;Name=MCE2618967.1;gbkey=CDS;gene=sdaAB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606087.1;locus_tag=LVR01_06895;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=MCE2618967.1;transl_table=11 JAJSBG010000021.1 Genbank gene 35936 36808 . + . ID=gene-LVR01_06900;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=LVR01_06900 JAJSBG010000021.1 Protein Homology CDS 35936 36808 . + 0 ID=cds-MCE2618968.1;Parent=gene-LVR01_06900;Dbxref=NCBI_GP:MCE2618968.1;Name=MCE2618968.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500050.1;locus_tag=LVR01_06900;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MCE2618968.1;transl_table=11 JAJSBG010000021.1 Genbank gene 36830 37462 . + . ID=gene-LVR01_06905;Name=LVR01_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06905 JAJSBG010000021.1 Protein Homology CDS 36830 37462 . + 0 ID=cds-MCE2618969.1;Parent=gene-LVR01_06905;Dbxref=NCBI_GP:MCE2618969.1;Name=MCE2618969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200889.1;locus_tag=LVR01_06905;product=HAD hydrolase-like protein;protein_id=MCE2618969.1;transl_table=11 ##sequence-region JAJSBG010000022.1 1 29952 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000022.1 Genbank region 1 29952 . + . ID=JAJSBG010000022.1:1..29952;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000022.1 Genbank gene 525 1595 . + . ID=gene-LVR01_06910;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=LVR01_06910 JAJSBG010000022.1 Protein Homology CDS 525 1595 . + 0 ID=cds-MCE2618970.1;Parent=gene-LVR01_06910;Dbxref=NCBI_GP:MCE2618970.1;Name=MCE2618970.1;gbkey=CDS;gene=xerS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817875.1;locus_tag=LVR01_06910;product=tyrosine recombinase XerS;protein_id=MCE2618970.1;transl_table=11 JAJSBG010000022.1 Genbank gene 1808 3160 . - . ID=gene-LVR01_06915;Name=pdrM;gbkey=Gene;gene=pdrM;gene_biotype=protein_coding;locus_tag=LVR01_06915 JAJSBG010000022.1 Protein Homology CDS 1808 3160 . - 0 ID=cds-MCE2618971.1;Parent=gene-LVR01_06915;Dbxref=NCBI_GP:MCE2618971.1;Name=MCE2618971.1;gbkey=CDS;gene=pdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276616.1;locus_tag=LVR01_06915;product=sodium-coupled multidrug efflux MATE transporter PdrM;protein_id=MCE2618971.1;transl_table=11 JAJSBG010000022.1 Genbank gene 3171 3431 . - . ID=gene-LVR01_06920;Name=LVR01_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06920 JAJSBG010000022.1 Protein Homology CDS 3171 3431 . - 0 ID=cds-MCE2618972.1;Parent=gene-LVR01_06920;Dbxref=NCBI_GP:MCE2618972.1;Name=MCE2618972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398086.1;locus_tag=LVR01_06920;product=hypothetical protein;protein_id=MCE2618972.1;transl_table=11 JAJSBG010000022.1 Genbank gene 3445 4713 . - . ID=gene-LVR01_06925;Name=LVR01_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06925 JAJSBG010000022.1 Protein Homology CDS 3445 4713 . - 0 ID=cds-MCE2618973.1;Parent=gene-LVR01_06925;Dbxref=NCBI_GP:MCE2618973.1;Name=MCE2618973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924471.1;locus_tag=LVR01_06925;product=dihydroorotase;protein_id=MCE2618973.1;transl_table=11 JAJSBG010000022.1 Genbank gene 4726 5190 . - . ID=gene-LVR01_06930;Name=LVR01_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06930 JAJSBG010000022.1 Protein Homology CDS 4726 5190 . - 0 ID=cds-MCE2618974.1;Parent=gene-LVR01_06930;Dbxref=NCBI_GP:MCE2618974.1;Name=MCE2618974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003012002.1;locus_tag=LVR01_06930;product=8-oxo-dGTP diphosphatase;protein_id=MCE2618974.1;transl_table=11 JAJSBG010000022.1 Genbank gene 5200 5853 . - . ID=gene-LVR01_06935;Name=LVR01_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06935 JAJSBG010000022.1 Protein Homology CDS 5200 5853 . - 0 ID=cds-MCE2618975.1;Parent=gene-LVR01_06935;Dbxref=NCBI_GP:MCE2618975.1;Name=MCE2618975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841111.1;locus_tag=LVR01_06935;product=uracil-DNA glycosylase;protein_id=MCE2618975.1;transl_table=11 JAJSBG010000022.1 Genbank gene 5915 6607 . - . ID=gene-LVR01_06940;Name=LVR01_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06940 JAJSBG010000022.1 Protein Homology CDS 5915 6607 . - 0 ID=cds-MCE2618976.1;Parent=gene-LVR01_06940;Dbxref=NCBI_GP:MCE2618976.1;Name=MCE2618976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120608.1;locus_tag=LVR01_06940;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=MCE2618976.1;transl_table=11 JAJSBG010000022.1 Genbank gene 6726 6938 . - . ID=gene-LVR01_06945;Name=LVR01_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06945 JAJSBG010000022.1 Protein Homology CDS 6726 6938 . - 0 ID=cds-MCE2618977.1;Parent=gene-LVR01_06945;Dbxref=NCBI_GP:MCE2618977.1;Name=MCE2618977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014185.1;locus_tag=LVR01_06945;product=hypothetical protein;protein_id=MCE2618977.1;transl_table=11 JAJSBG010000022.1 Genbank gene 6987 7199 . - . ID=gene-LVR01_06950;Name=LVR01_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06950 JAJSBG010000022.1 Protein Homology CDS 6987 7199 . - 0 ID=cds-MCE2618978.1;Parent=gene-LVR01_06950;Dbxref=NCBI_GP:MCE2618978.1;Name=MCE2618978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989850.1;locus_tag=LVR01_06950;product=hypothetical protein;protein_id=MCE2618978.1;transl_table=11 JAJSBG010000022.1 Genbank gene 7702 8604 . - . ID=gene-LVR01_06955;Name=LVR01_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06955 JAJSBG010000022.1 Protein Homology CDS 7702 8604 . - 0 ID=cds-MCE2618979.1;Parent=gene-LVR01_06955;Dbxref=NCBI_GP:MCE2618979.1;Name=MCE2618979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000619809.1;locus_tag=LVR01_06955;product=hypothetical protein;protein_id=MCE2618979.1;transl_table=11 JAJSBG010000022.1 Genbank gene 8767 9498 . - . ID=gene-LVR01_06960;Name=LVR01_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06960 JAJSBG010000022.1 Protein Homology CDS 8767 9498 . - 0 ID=cds-MCE2618980.1;Parent=gene-LVR01_06960;Dbxref=NCBI_GP:MCE2618980.1;Name=MCE2618980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866696.1;locus_tag=LVR01_06960;product=hypothetical protein;protein_id=MCE2618980.1;transl_table=11 JAJSBG010000022.1 Genbank gene 10122 10496 . - . ID=gene-LVR01_06965;Name=LVR01_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06965 JAJSBG010000022.1 Protein Homology CDS 10122 10496 . - 0 ID=cds-MCE2618981.1;Parent=gene-LVR01_06965;Dbxref=NCBI_GP:MCE2618981.1;Name=MCE2618981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960428.1;locus_tag=LVR01_06965;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=MCE2618981.1;transl_table=11 JAJSBG010000022.1 Genbank gene 10496 11071 . - . ID=gene-LVR01_06970;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=LVR01_06970 JAJSBG010000022.1 Protein Homology CDS 10496 11071 . - 0 ID=cds-MCE2618982.1;Parent=gene-LVR01_06970;Dbxref=NCBI_GP:MCE2618982.1;Name=MCE2618982.1;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397816.1;locus_tag=LVR01_06970;product=dihydroxyacetone kinase subunit L;protein_id=MCE2618982.1;transl_table=11 JAJSBG010000022.1 Genbank gene 11093 12082 . - . ID=gene-LVR01_06975;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=LVR01_06975 JAJSBG010000022.1 Protein Homology CDS 11093 12082 . - 0 ID=cds-MCE2618983.1;Parent=gene-LVR01_06975;Dbxref=NCBI_GP:MCE2618983.1;Name=MCE2618983.1;gbkey=CDS;gene=dhaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049938.1;locus_tag=LVR01_06975;product=dihydroxyacetone kinase subunit DhaK;protein_id=MCE2618983.1;transl_table=11 JAJSBG010000022.1 Genbank pseudogene 12236 12655 . + . ID=gene-LVR01_06980;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=pseudogene;locus_tag=LVR01_06980;pseudo=true JAJSBG010000022.1 Protein Homology CDS 12236 12655 . + 0 ID=cds-LVR01_06980;Parent=gene-LVR01_06980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=dhaS;inference=COORDINATES: protein motif:HMM:TIGR02366.1;locus_tag=LVR01_06980;product=dihydroxyacetone kinase transcriptional activator DhaS;pseudo=true;transl_table=11 JAJSBG010000022.1 Genbank gene 12764 13753 . + . ID=gene-LVR01_06985;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=LVR01_06985 JAJSBG010000022.1 Protein Homology CDS 12764 13753 . + 0 ID=cds-MCE2618984.1;Parent=gene-LVR01_06985;Dbxref=NCBI_GP:MCE2618984.1;Name=MCE2618984.1;gbkey=CDS;gene=dhaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142826.1;locus_tag=LVR01_06985;product=DhaKLM operon coactivator DhaQ;protein_id=MCE2618984.1;transl_table=11 JAJSBG010000022.1 Genbank gene 13817 13963 . + . ID=gene-LVR01_06990;Name=LVR01_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_06990 JAJSBG010000022.1 Protein Homology CDS 13817 13963 . + 0 ID=cds-MCE2618985.1;Parent=gene-LVR01_06990;Dbxref=NCBI_GP:MCE2618985.1;Name=MCE2618985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_06990;product=hypothetical protein;protein_id=MCE2618985.1;transl_table=11 JAJSBG010000022.1 Genbank gene 14026 15759 . - . ID=gene-LVR01_06995;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LVR01_06995 JAJSBG010000022.1 Protein Homology CDS 14026 15759 . - 0 ID=cds-MCE2618986.1;Parent=gene-LVR01_06995;Dbxref=NCBI_GP:MCE2618986.1;Name=MCE2618986.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397822.1;locus_tag=LVR01_06995;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=MCE2618986.1;transl_table=11 JAJSBG010000022.1 Genbank gene 15765 16028 . - . ID=gene-LVR01_07000;Name=LVR01_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07000 JAJSBG010000022.1 Protein Homology CDS 15765 16028 . - 0 ID=cds-MCE2618987.1;Parent=gene-LVR01_07000;Dbxref=NCBI_GP:MCE2618987.1;Name=MCE2618987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=LVR01_07000;product=phosphocarrier protein HPr;protein_id=MCE2618987.1;transl_table=11 JAJSBG010000022.1 Genbank gene 16378 16596 . + . ID=gene-LVR01_07005;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LVR01_07005 JAJSBG010000022.1 Protein Homology CDS 16378 16596 . + 0 ID=cds-MCE2618988.1;Parent=gene-LVR01_07005;Dbxref=NCBI_GP:MCE2618988.1;Name=MCE2618988.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259243.1;locus_tag=LVR01_07005;product=glutaredoxin-like protein NrdH;protein_id=MCE2618988.1;transl_table=11 JAJSBG010000022.1 Genbank gene 16677 18836 . + . ID=gene-LVR01_07010;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LVR01_07010 JAJSBG010000022.1 Protein Homology CDS 16677 18836 . + 0 ID=cds-MCE2618989.1;Parent=gene-LVR01_07010;Dbxref=NCBI_GP:MCE2618989.1;Name=MCE2618989.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=LVR01_07010;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=MCE2618989.1;transl_table=11 JAJSBG010000022.1 Genbank gene 19024 19986 . + . ID=gene-LVR01_07015;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LVR01_07015 JAJSBG010000022.1 Protein Homology CDS 19024 19986 . + 0 ID=cds-MCE2618990.1;Parent=gene-LVR01_07015;Dbxref=NCBI_GP:MCE2618990.1;Name=MCE2618990.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253599.1;locus_tag=LVR01_07015;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=MCE2618990.1;transl_table=11 JAJSBG010000022.1 Genbank gene 19983 20129 . - . ID=gene-LVR01_07020;Name=LVR01_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07020 JAJSBG010000022.1 GeneMarkS-2+ CDS 19983 20129 . - 0 ID=cds-MCE2618991.1;Parent=gene-LVR01_07020;Dbxref=NCBI_GP:MCE2618991.1;Name=MCE2618991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07020;product=hypothetical protein;protein_id=MCE2618991.1;transl_table=11 JAJSBG010000022.1 Genbank gene 20319 21080 . + . ID=gene-LVR01_07025;Name=LVR01_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07025 JAJSBG010000022.1 Protein Homology CDS 20319 21080 . + 0 ID=cds-MCE2618992.1;Parent=gene-LVR01_07025;Dbxref=NCBI_GP:MCE2618992.1;Name=MCE2618992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917571.1;locus_tag=LVR01_07025;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCE2618992.1;transl_table=11 JAJSBG010000022.1 Genbank gene 21365 21622 . - . ID=gene-LVR01_07030;Name=LVR01_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07030 JAJSBG010000022.1 Protein Homology CDS 21365 21622 . - 0 ID=cds-MCE2618993.1;Parent=gene-LVR01_07030;Dbxref=NCBI_GP:MCE2618993.1;Name=MCE2618993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000471575.1;locus_tag=LVR01_07030;product=DUF3884 family protein;protein_id=MCE2618993.1;transl_table=11 JAJSBG010000022.1 Genbank gene 21664 23070 . - . ID=gene-LVR01_07035;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=LVR01_07035 JAJSBG010000022.1 Protein Homology CDS 21664 23070 . - 0 ID=cds-MCE2618994.1;Parent=gene-LVR01_07035;Dbxref=NCBI_GP:MCE2618994.1;Name=MCE2618994.1;gbkey=CDS;gene=lacG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864138.1;locus_tag=LVR01_07035;product=6-phospho-beta-galactosidase;protein_id=MCE2618994.1;transl_table=11 JAJSBG010000022.1 Genbank gene 23409 25100 . - . ID=gene-LVR01_07040;Name=LVR01_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07040 JAJSBG010000022.1 Protein Homology CDS 23409 25100 . - 0 ID=cds-MCE2618995.1;Parent=gene-LVR01_07040;Dbxref=NCBI_GP:MCE2618995.1;Name=MCE2618995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037357.1;locus_tag=LVR01_07040;product=lactose-specific PTS transporter subunit EIIC;protein_id=MCE2618995.1;transl_table=11 JAJSBG010000022.1 Genbank gene 25100 25417 . - . ID=gene-LVR01_07045;Name=LVR01_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07045 JAJSBG010000022.1 Protein Homology CDS 25100 25417 . - 0 ID=cds-MCE2618996.1;Parent=gene-LVR01_07045;Dbxref=NCBI_GP:MCE2618996.1;Name=MCE2618996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730102.1;locus_tag=LVR01_07045;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=MCE2618996.1;transl_table=11 JAJSBG010000022.1 Genbank gene 25453 26289 . - . ID=gene-LVR01_07050;Name=LVR01_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07050 JAJSBG010000022.1 Protein Homology CDS 25453 26289 . - 0 ID=cds-MCE2618997.1;Parent=gene-LVR01_07050;Dbxref=NCBI_GP:MCE2618997.1;Name=MCE2618997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285719.1;locus_tag=LVR01_07050;product=transcription antiterminator;protein_id=MCE2618997.1;transl_table=11 JAJSBG010000022.1 Genbank gene 26523 27503 . - . ID=gene-LVR01_07055;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=LVR01_07055 JAJSBG010000022.1 Protein Homology CDS 26523 27503 . - 0 ID=cds-MCE2618998.1;Parent=gene-LVR01_07055;Dbxref=NCBI_GP:MCE2618998.1;Name=MCE2618998.1;gbkey=CDS;gene=lacD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229146.1;locus_tag=LVR01_07055;product=tagatose-bisphosphate aldolase;protein_id=MCE2618998.1;transl_table=11 JAJSBG010000022.1 Genbank gene 27505 28434 . - . ID=gene-LVR01_07060;Name=LVR01_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07060 JAJSBG010000022.1 Protein Homology CDS 27505 28434 . - 0 ID=cds-MCE2618999.1;Parent=gene-LVR01_07060;Dbxref=NCBI_GP:MCE2618999.1;Name=MCE2618999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604270.1;locus_tag=LVR01_07060;product=tagatose-6-phosphate kinase;protein_id=MCE2618999.1;transl_table=11 JAJSBG010000022.1 Genbank gene 28445 28960 . - . ID=gene-LVR01_07065;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=LVR01_07065 JAJSBG010000022.1 Protein Homology CDS 28445 28960 . - 0 ID=cds-MCE2619000.1;Parent=gene-LVR01_07065;Dbxref=NCBI_GP:MCE2619000.1;Name=MCE2619000.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002994294.1;locus_tag=LVR01_07065;product=galactose-6-phosphate isomerase subunit LacB;protein_id=MCE2619000.1;transl_table=11 JAJSBG010000022.1 Genbank gene 29109 29534 . - . ID=gene-LVR01_07070;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=LVR01_07070 JAJSBG010000022.1 Protein Homology CDS 29109 29534 . - 0 ID=cds-MCE2619001.1;Parent=gene-LVR01_07070;Dbxref=NCBI_GP:MCE2619001.1;Name=MCE2619001.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590669.1;locus_tag=LVR01_07070;product=galactose-6-phosphate isomerase subunit LacA;protein_id=MCE2619001.1;transl_table=11 JAJSBG010000022.1 Genbank pseudogene 29692 29775 . - . ID=gene-LVR01_07075;Name=LVR01_07075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07075;pseudo=true JAJSBG010000022.1 Protein Homology CDS 29692 29775 . - 0 ID=cds-LVR01_07075;Parent=gene-LVR01_07075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883906.1;locus_tag=LVR01_07075;product=aldose epimerase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000023.1 1 28840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000023.1 Genbank region 1 28840 . + . ID=JAJSBG010000023.1:1..28840;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000023.1 Genbank gene 1 104 . + . ID=gene-LVR01_07080;Name=LVR01_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07080;partial=true;start_range=.,1 JAJSBG010000023.1 Protein Homology CDS 1 104 . + 2 ID=cds-MCE2619002.1;Parent=gene-LVR01_07080;Dbxref=NCBI_GP:MCE2619002.1;Name=MCE2619002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405235.1;locus_tag=LVR01_07080;partial=true;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCE2619002.1;start_range=.,1;transl_table=11 JAJSBG010000023.1 Genbank gene 268 474 . + . ID=gene-LVR01_07085;Name=LVR01_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07085 JAJSBG010000023.1 Protein Homology CDS 268 474 . + 0 ID=cds-MCE2619003.1;Parent=gene-LVR01_07085;Dbxref=NCBI_GP:MCE2619003.1;Name=MCE2619003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917045.1;locus_tag=LVR01_07085;product=hypothetical protein;protein_id=MCE2619003.1;transl_table=11 JAJSBG010000023.1 Genbank gene 458 889 . + . ID=gene-LVR01_07090;Name=LVR01_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07090 JAJSBG010000023.1 Protein Homology CDS 458 889 . + 0 ID=cds-MCE2619004.1;Parent=gene-LVR01_07090;Dbxref=NCBI_GP:MCE2619004.1;Name=MCE2619004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379281.1;locus_tag=LVR01_07090;product=DUF2335 domain-containing protein;protein_id=MCE2619004.1;transl_table=11 JAJSBG010000023.1 Genbank gene 1075 1263 . - . ID=gene-LVR01_07095;Name=LVR01_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07095 JAJSBG010000023.1 Protein Homology CDS 1075 1263 . - 0 ID=cds-MCE2619005.1;Parent=gene-LVR01_07095;Dbxref=NCBI_GP:MCE2619005.1;Name=MCE2619005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260128.1;locus_tag=LVR01_07095;product=hypothetical protein;protein_id=MCE2619005.1;transl_table=11 JAJSBG010000023.1 Genbank gene 1962 2633 . + . ID=gene-LVR01_07100;Name=LVR01_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07100 JAJSBG010000023.1 Protein Homology CDS 1962 2633 . + 0 ID=cds-MCE2619006.1;Parent=gene-LVR01_07100;Dbxref=NCBI_GP:MCE2619006.1;Name=MCE2619006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171686.1;locus_tag=LVR01_07100;product=GTP pyrophosphokinase family protein;protein_id=MCE2619006.1;transl_table=11 JAJSBG010000023.1 Genbank gene 2617 3435 . + . ID=gene-LVR01_07105;Name=LVR01_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07105 JAJSBG010000023.1 Protein Homology CDS 2617 3435 . + 0 ID=cds-MCE2619007.1;Parent=gene-LVR01_07105;Dbxref=NCBI_GP:MCE2619007.1;Name=MCE2619007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799053.1;locus_tag=LVR01_07105;product=NAD kinase;protein_id=MCE2619007.1;transl_table=11 JAJSBG010000023.1 Genbank gene 3432 4328 . + . ID=gene-LVR01_07110;Name=LVR01_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07110 JAJSBG010000023.1 Protein Homology CDS 3432 4328 . + 0 ID=cds-MCE2619008.1;Parent=gene-LVR01_07110;Dbxref=NCBI_GP:MCE2619008.1;Name=MCE2619008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209987.1;locus_tag=LVR01_07110;product=RluA family pseudouridine synthase;protein_id=MCE2619008.1;transl_table=11 JAJSBG010000023.1 Genbank gene 4372 5346 . + . ID=gene-LVR01_07115;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LVR01_07115 JAJSBG010000023.1 Protein Homology CDS 4372 5346 . + 0 ID=cds-MCE2619009.1;Parent=gene-LVR01_07115;Dbxref=NCBI_GP:MCE2619009.1;Name=MCE2619009.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252952.1;locus_tag=LVR01_07115;product=phosphate acetyltransferase;protein_id=MCE2619009.1;transl_table=11 JAJSBG010000023.1 Genbank gene 5690 5989 . - . ID=gene-LVR01_07120;Name=LVR01_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07120 JAJSBG010000023.1 Protein Homology CDS 5690 5989 . - 0 ID=cds-MCE2619010.1;Parent=gene-LVR01_07120;Dbxref=NCBI_GP:MCE2619010.1;Name=MCE2619010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808250.1;locus_tag=LVR01_07120;product=YbaB/EbfC family nucleoid-associated protein;protein_id=MCE2619010.1;transl_table=11 JAJSBG010000023.1 Genbank gene 6392 7090 . + . ID=gene-LVR01_07125;Name=LVR01_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07125 JAJSBG010000023.1 Protein Homology CDS 6392 7090 . + 0 ID=cds-MCE2619011.1;Parent=gene-LVR01_07125;Dbxref=NCBI_GP:MCE2619011.1;Name=MCE2619011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512574.1;locus_tag=LVR01_07125;product=DUF1275 domain-containing protein;protein_id=MCE2619011.1;transl_table=11 JAJSBG010000023.1 cmsearch sequence_feature 7155 7274 . + . ID=id-JAJSBG010000023.1:7155..7274;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000023.1 Genbank gene 7310 7624 . + . ID=gene-LVR01_07130;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LVR01_07130 JAJSBG010000023.1 Protein Homology CDS 7310 7624 . + 0 ID=cds-MCE2619012.1;Parent=gene-LVR01_07130;Dbxref=NCBI_GP:MCE2619012.1;Name=MCE2619012.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=LVR01_07130;product=50S ribosomal protein L21;protein_id=MCE2619012.1;transl_table=11 JAJSBG010000023.1 Genbank gene 7640 7984 . + . ID=gene-LVR01_07135;Name=LVR01_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07135 JAJSBG010000023.1 Protein Homology CDS 7640 7984 . + 0 ID=cds-MCE2619013.1;Parent=gene-LVR01_07135;Dbxref=NCBI_GP:MCE2619013.1;Name=MCE2619013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613691.1;locus_tag=LVR01_07135;product=ribosomal-processing cysteine protease Prp;protein_id=MCE2619013.1;transl_table=11 JAJSBG010000023.1 Genbank gene 8001 8294 . + . ID=gene-LVR01_07140;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LVR01_07140 JAJSBG010000023.1 Protein Homology CDS 8001 8294 . + 0 ID=cds-MCE2619014.1;Parent=gene-LVR01_07140;Dbxref=NCBI_GP:MCE2619014.1;Name=MCE2619014.1;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=LVR01_07140;product=50S ribosomal protein L27;protein_id=MCE2619014.1;transl_table=11 JAJSBG010000023.1 Genbank pseudogene 8433 8573 . - . ID=gene-LVR01_07145;Name=LVR01_07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07145;pseudo=true JAJSBG010000023.1 Protein Homology CDS 8433 8573 . - 0 ID=cds-LVR01_07145;Parent=gene-LVR01_07145;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617844.1;locus_tag=LVR01_07145;product=DUF1980 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000023.1 Genbank gene 9052 9969 . + . ID=gene-LVR01_07150;Name=LVR01_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07150 JAJSBG010000023.1 Protein Homology CDS 9052 9969 . + 0 ID=cds-MCE2619015.1;Parent=gene-LVR01_07150;Dbxref=NCBI_GP:MCE2619015.1;Name=MCE2619015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587449.1;locus_tag=LVR01_07150;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=MCE2619015.1;transl_table=11 JAJSBG010000023.1 Genbank gene 10062 10910 . - . ID=gene-LVR01_07155;Name=LVR01_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07155 JAJSBG010000023.1 Protein Homology CDS 10062 10910 . - 0 ID=cds-MCE2619016.1;Parent=gene-LVR01_07155;Dbxref=NCBI_GP:MCE2619016.1;Name=MCE2619016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592058.1;locus_tag=LVR01_07155;product=YitT family protein;protein_id=MCE2619016.1;transl_table=11 JAJSBG010000023.1 Genbank gene 11052 11891 . + . ID=gene-LVR01_07160;Name=LVR01_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07160 JAJSBG010000023.1 Protein Homology CDS 11052 11891 . + 0 ID=cds-MCE2619017.1;Parent=gene-LVR01_07160;Dbxref=NCBI_GP:MCE2619017.1;Name=MCE2619017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161411.1;locus_tag=LVR01_07160;product=DegV family protein;protein_id=MCE2619017.1;transl_table=11 JAJSBG010000023.1 Genbank gene 11998 12273 . + . ID=gene-LVR01_07165;Name=LVR01_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07165 JAJSBG010000023.1 Protein Homology CDS 11998 12273 . + 0 ID=cds-MCE2619018.1;Parent=gene-LVR01_07165;Dbxref=NCBI_GP:MCE2619018.1;Name=MCE2619018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950996.1;locus_tag=LVR01_07165;product=HU family DNA-binding protein;protein_id=MCE2619018.1;transl_table=11 JAJSBG010000023.1 Genbank gene 12696 14597 . + . ID=gene-LVR01_07170;Name=LVR01_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07170 JAJSBG010000023.1 Protein Homology CDS 12696 14597 . + 0 ID=cds-MCE2619019.1;Parent=gene-LVR01_07170;Dbxref=NCBI_GP:MCE2619019.1;Name=MCE2619019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584877.1;locus_tag=LVR01_07170;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCE2619019.1;transl_table=11 JAJSBG010000023.1 Genbank gene 14600 15463 . + . ID=gene-LVR01_07175;Name=LVR01_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07175 JAJSBG010000023.1 Protein Homology CDS 14600 15463 . + 0 ID=cds-MCE2619020.1;Parent=gene-LVR01_07175;Dbxref=NCBI_GP:MCE2619020.1;Name=MCE2619020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012291596.1;locus_tag=LVR01_07175;product=XRE/MutR family transcriptional regulator;protein_id=MCE2619020.1;transl_table=11 JAJSBG010000023.1 Genbank gene 15543 16721 . + . ID=gene-LVR01_07180;Name=LVR01_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07180 JAJSBG010000023.1 Protein Homology CDS 15543 16721 . + 0 ID=cds-MCE2619021.1;Parent=gene-LVR01_07180;Dbxref=NCBI_GP:MCE2619021.1;Name=MCE2619021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083019.1;locus_tag=LVR01_07180;product=MFS transporter;protein_id=MCE2619021.1;transl_table=11 JAJSBG010000023.1 Genbank gene 16814 18772 . + . ID=gene-LVR01_07185;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LVR01_07185 JAJSBG010000023.1 Protein Homology CDS 16814 18772 . + 0 ID=cds-MCE2619022.1;Parent=gene-LVR01_07185;Dbxref=NCBI_GP:MCE2619022.1;Name=MCE2619022.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042597.1;locus_tag=LVR01_07185;product=NAD-dependent DNA ligase LigA;protein_id=MCE2619022.1;transl_table=11 JAJSBG010000023.1 Genbank gene 18775 19743 . + . ID=gene-LVR01_07190;Name=LVR01_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07190 JAJSBG010000023.1 Protein Homology CDS 18775 19743 . + 0 ID=cds-MCE2619023.1;Parent=gene-LVR01_07190;Dbxref=NCBI_GP:MCE2619023.1;Name=MCE2619023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134183.1;locus_tag=LVR01_07190;product=diacylglycerol kinase family lipid kinase;protein_id=MCE2619023.1;transl_table=11 JAJSBG010000023.1 Genbank gene 19766 22045 . + . ID=gene-LVR01_07195;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=LVR01_07195 JAJSBG010000023.1 Protein Homology CDS 19766 22045 . + 0 ID=cds-MCE2619024.1;Parent=gene-LVR01_07195;Dbxref=NCBI_GP:MCE2619024.1;Name=MCE2619024.1;gbkey=CDS;gene=pulA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283081.1;locus_tag=LVR01_07195;product=type I pullulanase;protein_id=MCE2619024.1;transl_table=11 JAJSBG010000023.1 Genbank gene 22426 24354 . + . ID=gene-LVR01_07200;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LVR01_07200 JAJSBG010000023.1 Protein Homology CDS 22426 24354 . + 0 ID=cds-MCE2619025.1;Parent=gene-LVR01_07200;Dbxref=NCBI_GP:MCE2619025.1;Name=MCE2619025.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398622.1;locus_tag=LVR01_07200;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=MCE2619025.1;transl_table=11 JAJSBG010000023.1 Genbank gene 24344 25486 . + . ID=gene-LVR01_07205;Name=LVR01_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07205 JAJSBG010000023.1 Protein Homology CDS 24344 25486 . + 0 ID=cds-MCE2619026.1;Parent=gene-LVR01_07205;Dbxref=NCBI_GP:MCE2619026.1;Name=MCE2619026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787267.1;locus_tag=LVR01_07205;product=glucose-1-phosphate adenylyltransferase;protein_id=MCE2619026.1;transl_table=11 JAJSBG010000023.1 Genbank gene 25476 26615 . + . ID=gene-LVR01_07210;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=LVR01_07210 JAJSBG010000023.1 Protein Homology CDS 25476 26615 . + 0 ID=cds-MCE2619027.1;Parent=gene-LVR01_07210;Dbxref=NCBI_GP:MCE2619027.1;Name=MCE2619027.1;gbkey=CDS;gene=glgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260264.1;locus_tag=LVR01_07210;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=MCE2619027.1;transl_table=11 JAJSBG010000023.1 Genbank gene 26612 28045 . + . ID=gene-LVR01_07215;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=LVR01_07215 JAJSBG010000023.1 Protein Homology CDS 26612 28045 . + 0 ID=cds-MCE2619028.1;Parent=gene-LVR01_07215;Dbxref=NCBI_GP:MCE2619028.1;Name=MCE2619028.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697278.1;locus_tag=LVR01_07215;product=glycogen synthase GlgA;protein_id=MCE2619028.1;transl_table=11 JAJSBG010000023.1 Genbank gene 28104 28748 . + . ID=gene-LVR01_07220;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LVR01_07220 JAJSBG010000023.1 Protein Homology CDS 28104 28748 . + 0 ID=cds-MCE2619029.1;Parent=gene-LVR01_07220;Dbxref=NCBI_GP:MCE2619029.1;Name=MCE2619029.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084485.1;locus_tag=LVR01_07220;product=phosphoserine phosphatase SerB;protein_id=MCE2619029.1;transl_table=11 ##sequence-region JAJSBG010000024.1 1 27614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000024.1 Genbank region 1 27614 . + . ID=JAJSBG010000024.1:1..27614;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000024.1 Genbank gene 1 284 . + . ID=gene-LVR01_07225;Name=LVR01_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07225;partial=true;start_range=.,1 JAJSBG010000024.1 GeneMarkS-2+ CDS 1 284 . + 2 ID=cds-MCE2619030.1;Parent=gene-LVR01_07225;Dbxref=NCBI_GP:MCE2619030.1;Name=MCE2619030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07225;partial=true;product=hypothetical protein;protein_id=MCE2619030.1;start_range=.,1;transl_table=11 JAJSBG010000024.1 Genbank gene 263 1282 . + . ID=gene-LVR01_07230;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LVR01_07230 JAJSBG010000024.1 Protein Homology CDS 263 1282 . + 0 ID=cds-MCE2619031.1;Parent=gene-LVR01_07230;Dbxref=NCBI_GP:MCE2619031.1;Name=MCE2619031.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153709.1;locus_tag=LVR01_07230;product=UDP-glucose 4-epimerase GalE;protein_id=MCE2619031.1;transl_table=11 JAJSBG010000024.1 Genbank gene 1266 2219 . + . ID=gene-LVR01_07235;Name=LVR01_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07235 JAJSBG010000024.1 Protein Homology CDS 1266 2219 . + 0 ID=cds-MCE2619032.1;Parent=gene-LVR01_07235;Dbxref=NCBI_GP:MCE2619032.1;Name=MCE2619032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364648.1;locus_tag=LVR01_07235;product=glycosyltransferase family 2 protein;protein_id=MCE2619032.1;transl_table=11 JAJSBG010000024.1 Genbank gene 2394 3038 . + . ID=gene-LVR01_07240;Name=LVR01_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07240 JAJSBG010000024.1 Protein Homology CDS 2394 3038 . + 0 ID=cds-MCE2619033.1;Parent=gene-LVR01_07240;Dbxref=NCBI_GP:MCE2619033.1;Name=MCE2619033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949237.1;locus_tag=LVR01_07240;product=hypothetical protein;protein_id=MCE2619033.1;transl_table=11 JAJSBG010000024.1 Genbank pseudogene 3077 3178 . + . ID=gene-LVR01_07245;Name=LVR01_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07245;pseudo=true JAJSBG010000024.1 Protein Homology CDS 3077 3178 . + 0 ID=cds-LVR01_07245;Parent=gene-LVR01_07245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677122.1;locus_tag=LVR01_07245;product=group 2 glycosyl transferase;pseudo=true;transl_table=11 JAJSBG010000024.1 Genbank gene 3242 3445 . - . ID=gene-LVR01_07250;Name=LVR01_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07250 JAJSBG010000024.1 Protein Homology CDS 3242 3445 . - 0 ID=cds-MCE2619034.1;Parent=gene-LVR01_07250;Dbxref=NCBI_GP:MCE2619034.1;Name=MCE2619034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007557368.1;locus_tag=LVR01_07250;product=ferredoxin;protein_id=MCE2619034.1;transl_table=11 JAJSBG010000024.1 Genbank gene 3497 3973 . + . ID=gene-LVR01_07255;Name=LVR01_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07255 JAJSBG010000024.1 Protein Homology CDS 3497 3973 . + 0 ID=cds-MCE2619035.1;Parent=gene-LVR01_07255;Dbxref=NCBI_GP:MCE2619035.1;Name=MCE2619035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399345.1;locus_tag=LVR01_07255;product=LysM domain-containing protein;protein_id=MCE2619035.1;transl_table=11 JAJSBG010000024.1 Genbank gene 3982 4653 . + . ID=gene-LVR01_07260;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LVR01_07260 JAJSBG010000024.1 Protein Homology CDS 3982 4653 . + 0 ID=cds-MCE2619036.1;Parent=gene-LVR01_07260;Dbxref=NCBI_GP:MCE2619036.1;Name=MCE2619036.1;gbkey=CDS;gene=cmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849376.1;locus_tag=LVR01_07260;product=(d)CMP kinase;protein_id=MCE2619036.1;transl_table=11 JAJSBG010000024.1 Genbank gene 4784 5122 . + . ID=gene-LVR01_07265;Name=LVR01_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07265 JAJSBG010000024.1 Protein Homology CDS 4784 5122 . + 0 ID=cds-MCE2619037.1;Parent=gene-LVR01_07265;Dbxref=NCBI_GP:MCE2619037.1;Name=MCE2619037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920966.1;locus_tag=LVR01_07265;product=alkylphosphonate utilization protein;protein_id=MCE2619037.1;transl_table=11 JAJSBG010000024.1 Genbank gene 5125 5754 . + . ID=gene-LVR01_07270;Name=LVR01_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07270 JAJSBG010000024.1 Protein Homology CDS 5125 5754 . + 0 ID=cds-MCE2619038.1;Parent=gene-LVR01_07270;Dbxref=NCBI_GP:MCE2619038.1;Name=MCE2619038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033949.1;locus_tag=LVR01_07270;product=Pr6Pr family membrane protein;protein_id=MCE2619038.1;transl_table=11 JAJSBG010000024.1 Genbank gene 5994 7145 . + . ID=gene-LVR01_07275;Name=LVR01_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07275 JAJSBG010000024.1 Protein Homology CDS 5994 7145 . + 0 ID=cds-MCE2619039.1;Parent=gene-LVR01_07275;Dbxref=NCBI_GP:MCE2619039.1;Name=MCE2619039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808687.1;locus_tag=LVR01_07275;product=MFS transporter;protein_id=MCE2619039.1;transl_table=11 JAJSBG010000024.1 Genbank gene 7464 8213 . + . ID=gene-LVR01_07280;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LVR01_07280 JAJSBG010000024.1 Protein Homology CDS 7464 8213 . + 0 ID=cds-MCE2619040.1;Parent=gene-LVR01_07280;Dbxref=NCBI_GP:MCE2619040.1;Name=MCE2619040.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999919.1;locus_tag=LVR01_07280;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=MCE2619040.1;transl_table=11 JAJSBG010000024.1 Genbank gene 8203 8976 . + . ID=gene-LVR01_07285;Name=LVR01_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07285 JAJSBG010000024.1 Protein Homology CDS 8203 8976 . + 0 ID=cds-MCE2619041.1;Parent=gene-LVR01_07285;Dbxref=NCBI_GP:MCE2619041.1;Name=MCE2619041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397633.1;locus_tag=LVR01_07285;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MCE2619041.1;transl_table=11 JAJSBG010000024.1 Genbank gene 8954 9415 . + . ID=gene-LVR01_07290;Name=LVR01_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07290 JAJSBG010000024.1 Protein Homology CDS 8954 9415 . + 0 ID=cds-MCE2619042.1;Parent=gene-LVR01_07290;Dbxref=NCBI_GP:MCE2619042.1;Name=MCE2619042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814967.1;locus_tag=LVR01_07290;product=ECF transporter S component;protein_id=MCE2619042.1;transl_table=11 JAJSBG010000024.1 Genbank pseudogene 9563 10037 . - . ID=gene-LVR01_07295;Name=LVR01_07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07295;pseudo=true JAJSBG010000024.1 Protein Homology CDS 9563 10037 . - 0 ID=cds-LVR01_07295;Parent=gene-LVR01_07295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155488.1;locus_tag=LVR01_07295;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAJSBG010000024.1 Genbank gene 10086 10808 . - . ID=gene-LVR01_07300;Name=LVR01_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07300 JAJSBG010000024.1 Protein Homology CDS 10086 10808 . - 0 ID=cds-MCE2619043.1;Parent=gene-LVR01_07300;Dbxref=NCBI_GP:MCE2619043.1;Name=MCE2619043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017479.1;locus_tag=LVR01_07300;product=ABC transporter permease;protein_id=MCE2619043.1;transl_table=11 JAJSBG010000024.1 Genbank gene 10810 11721 . - . ID=gene-LVR01_07305;Name=LVR01_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07305 JAJSBG010000024.1 Protein Homology CDS 10810 11721 . - 0 ID=cds-MCE2619044.1;Parent=gene-LVR01_07305;Dbxref=NCBI_GP:MCE2619044.1;Name=MCE2619044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197224.1;locus_tag=LVR01_07305;product=ABC transporter ATP-binding protein;protein_id=MCE2619044.1;transl_table=11 JAJSBG010000024.1 Genbank gene 11718 12851 . - . ID=gene-LVR01_07310;Name=LVR01_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07310 JAJSBG010000024.1 Protein Homology CDS 11718 12851 . - 0 ID=cds-MCE2619045.1;Parent=gene-LVR01_07310;Dbxref=NCBI_GP:MCE2619045.1;Name=MCE2619045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675233.1;locus_tag=LVR01_07310;product=ThiF family adenylyltransferase;protein_id=MCE2619045.1;transl_table=11 JAJSBG010000024.1 Genbank gene 13292 13999 . + . ID=gene-LVR01_07315;Name=LVR01_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07315 JAJSBG010000024.1 Protein Homology CDS 13292 13999 . + 0 ID=cds-MCE2619046.1;Parent=gene-LVR01_07315;Dbxref=NCBI_GP:MCE2619046.1;Name=MCE2619046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950056.1;locus_tag=LVR01_07315;product=LytTR family DNA-binding domain-containing protein;protein_id=MCE2619046.1;transl_table=11 JAJSBG010000024.1 Genbank gene 13999 15267 . + . ID=gene-LVR01_07320;Name=LVR01_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07320 JAJSBG010000024.1 Protein Homology CDS 13999 15267 . + 0 ID=cds-MCE2619047.1;Parent=gene-LVR01_07320;Dbxref=NCBI_GP:MCE2619047.1;Name=MCE2619047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961371.1;locus_tag=LVR01_07320;product=GHKL domain-containing protein;protein_id=MCE2619047.1;transl_table=11 JAJSBG010000024.1 Genbank gene 15286 16368 . - . ID=gene-LVR01_07325;Name=LVR01_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07325 JAJSBG010000024.1 Protein Homology CDS 15286 16368 . - 0 ID=cds-MCE2619048.1;Parent=gene-LVR01_07325;Dbxref=NCBI_GP:MCE2619048.1;Name=MCE2619048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040939.1;locus_tag=LVR01_07325;product=Xaa-Pro peptidase family protein;protein_id=MCE2619048.1;transl_table=11 JAJSBG010000024.1 Genbank gene 16495 17277 . - . ID=gene-LVR01_07330;Name=LVR01_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07330 JAJSBG010000024.1 Protein Homology CDS 16495 17277 . - 0 ID=cds-MCE2619049.1;Parent=gene-LVR01_07330;Dbxref=NCBI_GP:MCE2619049.1;Name=MCE2619049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255714.1;locus_tag=LVR01_07330;product=type 1 glutamine amidotransferase;protein_id=MCE2619049.1;transl_table=11 JAJSBG010000024.1 Genbank gene 17277 18620 . - . ID=gene-LVR01_07335;Name=LVR01_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07335 JAJSBG010000024.1 Protein Homology CDS 17277 18620 . - 0 ID=cds-MCE2619050.1;Parent=gene-LVR01_07335;Dbxref=NCBI_GP:MCE2619050.1;Name=MCE2619050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836724.1;locus_tag=LVR01_07335;product=Mur ligase family protein;protein_id=MCE2619050.1;transl_table=11 JAJSBG010000024.1 Genbank gene 18825 20141 . - . ID=gene-LVR01_07340;Name=LVR01_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07340 JAJSBG010000024.1 Protein Homology CDS 18825 20141 . - 0 ID=cds-MCE2619051.1;Parent=gene-LVR01_07340;Dbxref=NCBI_GP:MCE2619051.1;Name=MCE2619051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958936.1;locus_tag=LVR01_07340;product=FAD-containing oxidoreductase;protein_id=MCE2619051.1;transl_table=11 JAJSBG010000024.1 Genbank gene 20335 21561 . + . ID=gene-LVR01_07345;Name=LVR01_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07345 JAJSBG010000024.1 Protein Homology CDS 20335 21561 . + 0 ID=cds-MCE2619052.1;Parent=gene-LVR01_07345;Dbxref=NCBI_GP:MCE2619052.1;Name=MCE2619052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000841575.1;locus_tag=LVR01_07345;product=OFA family MFS transporter;protein_id=MCE2619052.1;transl_table=11 JAJSBG010000024.1 Genbank gene 21759 23324 . + . ID=gene-LVR01_07350;Name=LVR01_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07350 JAJSBG010000024.1 Protein Homology CDS 21759 23324 . + 0 ID=cds-MCE2619053.1;Parent=gene-LVR01_07350;Dbxref=NCBI_GP:MCE2619053.1;Name=MCE2619053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671067.1;locus_tag=LVR01_07350;product=DEAD/DEAH box helicase;protein_id=MCE2619053.1;transl_table=11 JAJSBG010000024.1 Genbank gene 23602 24390 . + . ID=gene-LVR01_07355;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=LVR01_07355 JAJSBG010000024.1 Protein Homology CDS 23602 24390 . + 0 ID=cds-MCE2619054.1;Parent=gene-LVR01_07355;Dbxref=NCBI_GP:MCE2619054.1;Name=MCE2619054.1;gbkey=CDS;gene=codY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399190.1;locus_tag=LVR01_07355;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=MCE2619054.1;transl_table=11 JAJSBG010000024.1 Genbank gene 24390 24965 . + . ID=gene-LVR01_07360;Name=LVR01_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07360 JAJSBG010000024.1 Protein Homology CDS 24390 24965 . + 0 ID=cds-MCE2619055.1;Parent=gene-LVR01_07360;Dbxref=NCBI_GP:MCE2619055.1;Name=MCE2619055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255720.1;locus_tag=LVR01_07360;product=cysteine hydrolase;protein_id=MCE2619055.1;transl_table=11 JAJSBG010000024.1 Genbank gene 25046 25131 . + . ID=gene-LVR01_07365;Name=LVR01_07365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_07365 JAJSBG010000024.1 tRNAscan-SE tRNA 25046 25131 . + . ID=rna-LVR01_07365;Parent=gene-LVR01_07365;anticodon=(pos:25080..25082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_07365;product=tRNA-Leu JAJSBG010000024.1 tRNAscan-SE exon 25046 25131 . + . ID=exon-LVR01_07365-1;Parent=rna-LVR01_07365;anticodon=(pos:25080..25082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_07365;product=tRNA-Leu JAJSBG010000024.1 Genbank gene 25412 26542 . + . ID=gene-LVR01_07370;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LVR01_07370 JAJSBG010000024.1 Protein Homology CDS 25412 26542 . + 0 ID=cds-MCE2619056.1;Parent=gene-LVR01_07370;Dbxref=NCBI_GP:MCE2619056.1;Name=MCE2619056.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010064.1;locus_tag=LVR01_07370;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MCE2619056.1;transl_table=11 JAJSBG010000024.1 Genbank gene 26814 27326 . + . ID=gene-LVR01_07375;Name=LVR01_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07375 JAJSBG010000024.1 Protein Homology CDS 26814 27326 . + 0 ID=cds-MCE2619057.1;Parent=gene-LVR01_07375;Dbxref=NCBI_GP:MCE2619057.1;Name=MCE2619057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=LVR01_07375;product=adenine phosphoribosyltransferase;protein_id=MCE2619057.1;transl_table=11 ##sequence-region JAJSBG010000025.1 1 27303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000025.1 Genbank region 1 27303 . + . ID=JAJSBG010000025.1:1..27303;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000025.1 Genbank gene 1 254 . - . ID=gene-LVR01_07380;Name=LVR01_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07380;partial=true;start_range=.,1 JAJSBG010000025.1 Protein Homology CDS 1 254 . - 0 ID=cds-MCE2619058.1;Parent=gene-LVR01_07380;Dbxref=NCBI_GP:MCE2619058.1;Name=MCE2619058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_07380;partial=true;product=IS630 family transposase;protein_id=MCE2619058.1;start_range=.,1;transl_table=11 JAJSBG010000025.1 Genbank pseudogene 288 440 . + . ID=gene-LVR01_07385;Name=LVR01_07385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07385;pseudo=true JAJSBG010000025.1 Protein Homology CDS 288 440 . + 0 ID=cds-LVR01_07385;Parent=gene-LVR01_07385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868700.1;locus_tag=LVR01_07385;product=choline-binding protein A;pseudo=true;transl_table=11 JAJSBG010000025.1 Genbank pseudogene 657 959 . + . ID=gene-LVR01_07390;Name=LVR01_07390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07390;pseudo=true JAJSBG010000025.1 Protein Homology CDS 657 959 . + 0 ID=cds-LVR01_07390;Parent=gene-LVR01_07390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946123.1;locus_tag=LVR01_07390;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000025.1 Genbank gene 1144 1518 . + . ID=gene-LVR01_07395;Name=LVR01_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07395 JAJSBG010000025.1 Protein Homology CDS 1144 1518 . + 0 ID=cds-MCE2619059.1;Parent=gene-LVR01_07395;Dbxref=NCBI_GP:MCE2619059.1;Name=MCE2619059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002879833.1;locus_tag=LVR01_07395;product=CidA/LrgA family protein;protein_id=MCE2619059.1;transl_table=11 JAJSBG010000025.1 Genbank gene 1515 2210 . + . ID=gene-LVR01_07400;Name=LVR01_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07400 JAJSBG010000025.1 Protein Homology CDS 1515 2210 . + 0 ID=cds-MCE2619060.1;Parent=gene-LVR01_07400;Dbxref=NCBI_GP:MCE2619060.1;Name=MCE2619060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730459.1;locus_tag=LVR01_07400;product=LrgB family protein;protein_id=MCE2619060.1;transl_table=11 JAJSBG010000025.1 Genbank pseudogene 2418 2567 . - . ID=gene-LVR01_07405;Name=LVR01_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07405;pseudo=true JAJSBG010000025.1 Protein Homology CDS 2418 2567 . - 0 ID=cds-LVR01_07405;Parent=gene-LVR01_07405;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_07405;product=IS630 family transposase;pseudo=true;transl_table=11 JAJSBG010000025.1 Genbank gene 3155 4354 . - . ID=gene-LVR01_07410;Name=LVR01_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07410 JAJSBG010000025.1 Protein Homology CDS 3155 4354 . - 0 ID=cds-MCE2619061.1;Parent=gene-LVR01_07410;Dbxref=NCBI_GP:MCE2619061.1;Name=MCE2619061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245382.1;locus_tag=LVR01_07410;product=ABC transporter permease;protein_id=MCE2619061.1;transl_table=11 JAJSBG010000025.1 Genbank gene 4333 5244 . - . ID=gene-LVR01_07415;Name=LVR01_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07415 JAJSBG010000025.1 Protein Homology CDS 4333 5244 . - 0 ID=cds-MCE2619062.1;Parent=gene-LVR01_07415;Dbxref=NCBI_GP:MCE2619062.1;Name=MCE2619062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895307.1;locus_tag=LVR01_07415;product=ABC transporter ATP-binding protein;protein_id=MCE2619062.1;transl_table=11 JAJSBG010000025.1 Genbank gene 5367 5558 . + . ID=gene-LVR01_07420;Name=LVR01_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07420 JAJSBG010000025.1 GeneMarkS-2+ CDS 5367 5558 . + 0 ID=cds-MCE2619063.1;Parent=gene-LVR01_07420;Dbxref=NCBI_GP:MCE2619063.1;Name=MCE2619063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07420;product=hypothetical protein;protein_id=MCE2619063.1;transl_table=11 JAJSBG010000025.1 Genbank pseudogene 5778 6062 . + . ID=gene-LVR01_07425;Name=LVR01_07425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07425;pseudo=true JAJSBG010000025.1 Protein Homology CDS 5778 6062 . + 0 ID=cds-LVR01_07425;Parent=gene-LVR01_07425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558115.1;locus_tag=LVR01_07425;product=IS30 family transposase;pseudo=true;transl_table=11 JAJSBG010000025.1 Genbank gene 6465 7082 . + . ID=gene-LVR01_07430;Name=LVR01_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07430 JAJSBG010000025.1 Protein Homology CDS 6465 7082 . + 0 ID=cds-MCE2619064.1;Parent=gene-LVR01_07430;Dbxref=NCBI_GP:MCE2619064.1;Name=MCE2619064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076166.1;locus_tag=LVR01_07430;product=TVP38/TMEM64 family protein;protein_id=MCE2619064.1;transl_table=11 JAJSBG010000025.1 Genbank gene 7125 8012 . - . ID=gene-LVR01_07435;Name=LVR01_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07435 JAJSBG010000025.1 Protein Homology CDS 7125 8012 . - 0 ID=cds-MCE2619065.1;Parent=gene-LVR01_07435;Dbxref=NCBI_GP:MCE2619065.1;Name=MCE2619065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164317.1;locus_tag=LVR01_07435;product=ROK family protein;protein_id=MCE2619065.1;transl_table=11 JAJSBG010000025.1 Genbank gene 8161 10047 . - . ID=gene-LVR01_07440;Name=LVR01_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07440 JAJSBG010000025.1 Protein Homology CDS 8161 10047 . - 0 ID=cds-MCE2619066.1;Parent=gene-LVR01_07440;Dbxref=NCBI_GP:MCE2619066.1;Name=MCE2619066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064575.1;locus_tag=LVR01_07440;product=sucrose-specific PTS transporter subunit IIBC;protein_id=MCE2619066.1;transl_table=11 JAJSBG010000025.1 Genbank gene 10416 11870 . + . ID=gene-LVR01_07445;Name=LVR01_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07445 JAJSBG010000025.1 Protein Homology CDS 10416 11870 . + 0 ID=cds-MCE2619067.1;Parent=gene-LVR01_07445;Dbxref=NCBI_GP:MCE2619067.1;Name=MCE2619067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455313.1;locus_tag=LVR01_07445;product=glycoside hydrolase family 32 protein;protein_id=MCE2619067.1;transl_table=11 JAJSBG010000025.1 Genbank gene 11851 12816 . + . ID=gene-LVR01_07450;Name=LVR01_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07450 JAJSBG010000025.1 Protein Homology CDS 11851 12816 . + 0 ID=cds-MCE2619068.1;Parent=gene-LVR01_07450;Dbxref=NCBI_GP:MCE2619068.1;Name=MCE2619068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929307.1;locus_tag=LVR01_07450;product=LacI family DNA-binding transcriptional regulator;protein_id=MCE2619068.1;transl_table=11 JAJSBG010000025.1 Genbank gene 12852 14126 . - . ID=gene-LVR01_07455;Name=LVR01_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07455 JAJSBG010000025.1 Protein Homology CDS 12852 14126 . - 0 ID=cds-MCE2619069.1;Parent=gene-LVR01_07455;Dbxref=NCBI_GP:MCE2619069.1;Name=MCE2619069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704367.1;locus_tag=LVR01_07455;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=MCE2619069.1;transl_table=11 JAJSBG010000025.1 Genbank gene 14126 15298 . - . ID=gene-LVR01_07460;Name=LVR01_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07460 JAJSBG010000025.1 Protein Homology CDS 14126 15298 . - 0 ID=cds-MCE2619070.1;Parent=gene-LVR01_07460;Dbxref=NCBI_GP:MCE2619070.1;Name=MCE2619070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181031.1;locus_tag=LVR01_07460;product=hydroxymethylglutaryl-CoA synthase;protein_id=MCE2619070.1;transl_table=11 JAJSBG010000025.1 Genbank gene 15429 15677 . - . ID=gene-LVR01_07465;Name=LVR01_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07465 JAJSBG010000025.1 Protein Homology CDS 15429 15677 . - 0 ID=cds-MCE2619071.1;Parent=gene-LVR01_07465;Dbxref=NCBI_GP:MCE2619071.1;Name=MCE2619071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001858369.1;locus_tag=LVR01_07465;product=hypothetical protein;protein_id=MCE2619071.1;transl_table=11 JAJSBG010000025.1 Genbank gene 15838 16287 . - . ID=gene-LVR01_07470;Name=LVR01_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07470 JAJSBG010000025.1 Protein Homology CDS 15838 16287 . - 0 ID=cds-MCE2619072.1;Parent=gene-LVR01_07470;Dbxref=NCBI_GP:MCE2619072.1;Name=MCE2619072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398868.1;locus_tag=LVR01_07470;product=threonine/serine exporter family protein;protein_id=MCE2619072.1;transl_table=11 JAJSBG010000025.1 Genbank gene 16289 17047 . - . ID=gene-LVR01_07475;Name=LVR01_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07475 JAJSBG010000025.1 Protein Homology CDS 16289 17047 . - 0 ID=cds-MCE2619073.1;Parent=gene-LVR01_07475;Dbxref=NCBI_GP:MCE2619073.1;Name=MCE2619073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392945.1;locus_tag=LVR01_07475;product=threonine/serine exporter family protein;protein_id=MCE2619073.1;transl_table=11 JAJSBG010000025.1 Genbank gene 17162 19141 . - . ID=gene-LVR01_07480;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=LVR01_07480 JAJSBG010000025.1 Protein Homology CDS 17162 19141 . - 0 ID=cds-MCE2619074.1;Parent=gene-LVR01_07480;Dbxref=NCBI_GP:MCE2619074.1;Name=MCE2619074.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398866.1;locus_tag=LVR01_07480;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=MCE2619074.1;transl_table=11 JAJSBG010000025.1 Genbank gene 19138 19878 . - . ID=gene-LVR01_07485;Name=LVR01_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07485 JAJSBG010000025.1 Protein Homology CDS 19138 19878 . - 0 ID=cds-MCE2619075.1;Parent=gene-LVR01_07485;Dbxref=NCBI_GP:MCE2619075.1;Name=MCE2619075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397383.1;locus_tag=LVR01_07485;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=MCE2619075.1;transl_table=11 JAJSBG010000025.1 Genbank gene 19893 21206 . - . ID=gene-LVR01_07490;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LVR01_07490 JAJSBG010000025.1 Protein Homology CDS 19893 21206 . - 0 ID=cds-MCE2619076.1;Parent=gene-LVR01_07490;Dbxref=NCBI_GP:MCE2619076.1;Name=MCE2619076.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255437.1;locus_tag=LVR01_07490;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=MCE2619076.1;transl_table=11 JAJSBG010000025.1 Genbank gene 21199 22134 . - . ID=gene-LVR01_07495;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LVR01_07495 JAJSBG010000025.1 Protein Homology CDS 21199 22134 . - 0 ID=cds-MCE2619077.1;Parent=gene-LVR01_07495;Dbxref=NCBI_GP:MCE2619077.1;Name=MCE2619077.1;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163675.1;locus_tag=LVR01_07495;product=methionyl-tRNA formyltransferase;protein_id=MCE2619077.1;transl_table=11 JAJSBG010000025.1 Genbank gene 22147 24543 . - . ID=gene-LVR01_07500;Name=LVR01_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07500 JAJSBG010000025.1 Protein Homology CDS 22147 24543 . - 0 ID=cds-MCE2619078.1;Parent=gene-LVR01_07500;Dbxref=NCBI_GP:MCE2619078.1;Name=MCE2619078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001162119.1;locus_tag=LVR01_07500;product=primosomal protein N';protein_id=MCE2619078.1;transl_table=11 JAJSBG010000025.1 Genbank gene 24609 24923 . - . ID=gene-LVR01_07505;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LVR01_07505 JAJSBG010000025.1 Protein Homology CDS 24609 24923 . - 0 ID=cds-MCE2619079.1;Parent=gene-LVR01_07505;Dbxref=NCBI_GP:MCE2619079.1;Name=MCE2619079.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817694.1;locus_tag=LVR01_07505;product=DNA-directed RNA polymerase subunit omega;protein_id=MCE2619079.1;transl_table=11 JAJSBG010000025.1 Genbank gene 24948 25574 . - . ID=gene-LVR01_07510;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LVR01_07510 JAJSBG010000025.1 Protein Homology CDS 24948 25574 . - 0 ID=cds-MCE2619080.1;Parent=gene-LVR01_07510;Dbxref=NCBI_GP:MCE2619080.1;Name=MCE2619080.1;gbkey=CDS;gene=gmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775037.1;locus_tag=LVR01_07510;product=guanylate kinase;protein_id=MCE2619080.1;transl_table=11 JAJSBG010000025.1 Genbank gene 25855 27006 . + . ID=gene-LVR01_07515;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LVR01_07515 JAJSBG010000025.1 Protein Homology CDS 25855 27006 . + 0 ID=cds-MCE2619081.1;Parent=gene-LVR01_07515;Dbxref=NCBI_GP:MCE2619081.1;Name=MCE2619081.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730781.1;locus_tag=LVR01_07515;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=MCE2619081.1;transl_table=11 ##sequence-region JAJSBG010000026.1 1 27170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000026.1 Genbank region 1 27170 . + . ID=JAJSBG010000026.1:1..27170;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000026.1 Genbank gene 63 299 . + . ID=gene-LVR01_07520;Name=LVR01_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07520 JAJSBG010000026.1 GeneMarkS-2+ CDS 63 299 . + 0 ID=cds-MCE2619082.1;Parent=gene-LVR01_07520;Dbxref=NCBI_GP:MCE2619082.1;Name=MCE2619082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07520;product=hypothetical protein;protein_id=MCE2619082.1;transl_table=11 JAJSBG010000026.1 Genbank gene 389 709 . + . ID=gene-LVR01_07525;Name=LVR01_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07525 JAJSBG010000026.1 Protein Homology CDS 389 709 . + 0 ID=cds-MCE2619083.1;Parent=gene-LVR01_07525;Dbxref=NCBI_GP:MCE2619083.1;Name=MCE2619083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665424.1;locus_tag=LVR01_07525;product=PadR family transcriptional regulator;protein_id=MCE2619083.1;transl_table=11 JAJSBG010000026.1 Genbank gene 713 1528 . + . ID=gene-LVR01_07530;Name=LVR01_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07530 JAJSBG010000026.1 Protein Homology CDS 713 1528 . + 0 ID=cds-MCE2619084.1;Parent=gene-LVR01_07530;Dbxref=NCBI_GP:MCE2619084.1;Name=MCE2619084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864101.1;locus_tag=LVR01_07530;product=hypothetical protein;protein_id=MCE2619084.1;transl_table=11 JAJSBG010000026.1 Genbank gene 1601 2527 . + . ID=gene-LVR01_07535;Name=LVR01_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07535 JAJSBG010000026.1 Protein Homology CDS 1601 2527 . + 0 ID=cds-MCE2619085.1;Parent=gene-LVR01_07535;Dbxref=NCBI_GP:MCE2619085.1;Name=MCE2619085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269463.1;locus_tag=LVR01_07535;product=aldo/keto reductase family oxidoreductase;protein_id=MCE2619085.1;transl_table=11 JAJSBG010000026.1 Genbank gene 2627 2863 . + . ID=gene-LVR01_07540;Name=LVR01_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07540 JAJSBG010000026.1 Protein Homology CDS 2627 2863 . + 0 ID=cds-MCE2619086.1;Parent=gene-LVR01_07540;Dbxref=NCBI_GP:MCE2619086.1;Name=MCE2619086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596738.1;locus_tag=LVR01_07540;product=DUF2829 domain-containing protein;protein_id=MCE2619086.1;transl_table=11 JAJSBG010000026.1 Genbank gene 2856 3554 . + . ID=gene-LVR01_07545;Name=LVR01_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07545 JAJSBG010000026.1 Protein Homology CDS 2856 3554 . + 0 ID=cds-MCE2619087.1;Parent=gene-LVR01_07545;Dbxref=NCBI_GP:MCE2619087.1;Name=MCE2619087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006151199.1;locus_tag=LVR01_07545;product=3-oxoacyl-ACP reductase;protein_id=MCE2619087.1;transl_table=11 JAJSBG010000026.1 Genbank pseudogene 3564 4043 . + . ID=gene-LVR01_07550;Name=LVR01_07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07550;pseudo=true JAJSBG010000026.1 Protein Homology CDS 3564 4043 . + 0 ID=cds-LVR01_07550;Parent=gene-LVR01_07550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403355.1;locus_tag=LVR01_07550;product=NUDIX hydrolase;pseudo=true;transl_table=11 JAJSBG010000026.1 Genbank gene 4051 4779 . + . ID=gene-LVR01_07555;Name=LVR01_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07555 JAJSBG010000026.1 Protein Homology CDS 4051 4779 . + 0 ID=cds-MCE2619088.1;Parent=gene-LVR01_07555;Dbxref=NCBI_GP:MCE2619088.1;Name=MCE2619088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418695.1;locus_tag=LVR01_07555;product=GNAT family N-acetyltransferase;protein_id=MCE2619088.1;transl_table=11 JAJSBG010000026.1 Genbank pseudogene 4821 5679 . + . ID=gene-LVR01_07560;Name=LVR01_07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07560;pseudo=true JAJSBG010000026.1 Protein Homology CDS 4821 5679 . + 0 ID=cds-LVR01_07560;Parent=gene-LVR01_07560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866471.1;locus_tag=LVR01_07560;product=PEP-utilizing enzyme%2C TIM barrel domain protein;pseudo=true;transl_table=11 JAJSBG010000026.1 Genbank gene 5654 6094 . + . ID=gene-LVR01_07565;Name=LVR01_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07565 JAJSBG010000026.1 Protein Homology CDS 5654 6094 . + 0 ID=cds-MCE2619089.1;Parent=gene-LVR01_07565;Dbxref=NCBI_GP:MCE2619089.1;Name=MCE2619089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512572.1;locus_tag=LVR01_07565;product=ASCH domain-containing protein;protein_id=MCE2619089.1;transl_table=11 JAJSBG010000026.1 Genbank gene 6217 8763 . + . ID=gene-LVR01_07570;Name=LVR01_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07570 JAJSBG010000026.1 Protein Homology CDS 6217 8763 . + 0 ID=cds-MCE2619090.1;Parent=gene-LVR01_07570;Dbxref=NCBI_GP:MCE2619090.1;Name=MCE2619090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149098.1;locus_tag=LVR01_07570;product=M1 family metallopeptidase;protein_id=MCE2619090.1;transl_table=11 JAJSBG010000026.1 Genbank gene 8870 9544 . + . ID=gene-LVR01_07575;Name=ciaR;gbkey=Gene;gene=ciaR;gene_biotype=protein_coding;locus_tag=LVR01_07575 JAJSBG010000026.1 Protein Homology CDS 8870 9544 . + 0 ID=cds-MCE2619091.1;Parent=gene-LVR01_07575;Dbxref=NCBI_GP:MCE2619091.1;Name=MCE2619091.1;gbkey=CDS;gene=ciaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256510.1;locus_tag=LVR01_07575;product=two-component system response regulator CiaR;protein_id=MCE2619091.1;transl_table=11 JAJSBG010000026.1 Genbank gene 9534 10868 . + . ID=gene-LVR01_07580;Name=ciaH;gbkey=Gene;gene=ciaH;gene_biotype=protein_coding;locus_tag=LVR01_07580 JAJSBG010000026.1 Protein Homology CDS 9534 10868 . + 0 ID=cds-MCE2619092.1;Parent=gene-LVR01_07580;Dbxref=NCBI_GP:MCE2619092.1;Name=MCE2619092.1;gbkey=CDS;gene=ciaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000491790.1;locus_tag=LVR01_07580;product=two-component system sensor histidine kinase CiaH;protein_id=MCE2619092.1;transl_table=11 JAJSBG010000026.1 Genbank gene 11038 11325 . - . ID=gene-LVR01_07585;Name=LVR01_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07585 JAJSBG010000026.1 Protein Homology CDS 11038 11325 . - 0 ID=cds-MCE2619093.1;Parent=gene-LVR01_07585;Dbxref=NCBI_GP:MCE2619093.1;Name=MCE2619093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145225.1;locus_tag=LVR01_07585;product=DUF3270 domain-containing protein;protein_id=MCE2619093.1;transl_table=11 JAJSBG010000026.1 Genbank gene 11465 12394 . + . ID=gene-LVR01_07590;Name=LVR01_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07590 JAJSBG010000026.1 Protein Homology CDS 11465 12394 . + 0 ID=cds-MCE2619094.1;Parent=gene-LVR01_07590;Dbxref=NCBI_GP:MCE2619094.1;Name=MCE2619094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006154193.1;locus_tag=LVR01_07590;product=U32 family peptidase;protein_id=MCE2619094.1;transl_table=11 JAJSBG010000026.1 Genbank gene 12594 15044 . + . ID=gene-LVR01_07595;Name=LVR01_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07595 JAJSBG010000026.1 Protein Homology CDS 12594 15044 . + 0 ID=cds-MCE2619095.1;Parent=gene-LVR01_07595;Dbxref=NCBI_GP:MCE2619095.1;Name=MCE2619095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398369.1;locus_tag=LVR01_07595;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=MCE2619095.1;transl_table=11 JAJSBG010000026.1 Genbank gene 15081 16304 . + . ID=gene-LVR01_07600;Name=LVR01_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07600 JAJSBG010000026.1 Protein Homology CDS 15081 16304 . + 0 ID=cds-MCE2619096.1;Parent=gene-LVR01_07600;Dbxref=NCBI_GP:MCE2619096.1;Name=MCE2619096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830656.1;locus_tag=LVR01_07600;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MCE2619096.1;transl_table=11 JAJSBG010000026.1 Genbank gene 16315 16869 . + . ID=gene-LVR01_07605;Name=LVR01_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07605 JAJSBG010000026.1 Protein Homology CDS 16315 16869 . + 0 ID=cds-MCE2619097.1;Parent=gene-LVR01_07605;Dbxref=NCBI_GP:MCE2619097.1;Name=MCE2619097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269792.1;locus_tag=LVR01_07605;product=DJ-1/PfpI family protein;protein_id=MCE2619097.1;transl_table=11 JAJSBG010000026.1 Genbank gene 16954 17517 . + . ID=gene-LVR01_07610;Name=LVR01_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07610 JAJSBG010000026.1 Protein Homology CDS 16954 17517 . + 0 ID=cds-MCE2619098.1;Parent=gene-LVR01_07610;Dbxref=NCBI_GP:MCE2619098.1;Name=MCE2619098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398926.1;locus_tag=LVR01_07610;product=HAD family hydrolase;protein_id=MCE2619098.1;transl_table=11 JAJSBG010000026.1 Genbank gene 17532 19478 . + . ID=gene-LVR01_07615;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LVR01_07615 JAJSBG010000026.1 Protein Homology CDS 17532 19478 . + 0 ID=cds-MCE2619099.1;Parent=gene-LVR01_07615;Dbxref=NCBI_GP:MCE2619099.1;Name=MCE2619099.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002283665.1;locus_tag=LVR01_07615;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=MCE2619099.1;transl_table=11 JAJSBG010000026.1 Genbank gene 19560 21287 . + . ID=gene-LVR01_07620;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=LVR01_07620 JAJSBG010000026.1 Protein Homology CDS 19560 21287 . + 0 ID=cds-MCE2619100.1;Parent=gene-LVR01_07620;Dbxref=NCBI_GP:MCE2619100.1;Name=MCE2619100.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064817.1;locus_tag=LVR01_07620;product=septation ring formation regulator EzrA;protein_id=MCE2619100.1;transl_table=11 JAJSBG010000026.1 Genbank pseudogene 21479 21688 . + . ID=gene-LVR01_07625;Name=LVR01_07625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07625;pseudo=true JAJSBG010000026.1 Protein Homology CDS 21479 21688 . + 0 ID=cds-LVR01_07625;Parent=gene-LVR01_07625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941577.1;locus_tag=LVR01_07625;product=transposase domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000026.1 Genbank gene 22158 26951 . + . ID=gene-LVR01_07630;Name=LVR01_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07630 JAJSBG010000026.1 Protein Homology CDS 22158 26951 . + 0 ID=cds-MCE2619101.1;Parent=gene-LVR01_07630;Dbxref=NCBI_GP:MCE2619101.1;Name=MCE2619101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502033.1;locus_tag=LVR01_07630;product=S8 family serine peptidase;protein_id=MCE2619101.1;transl_table=11 ##sequence-region JAJSBG010000027.1 1 23277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000027.1 Genbank region 1 23277 . + . ID=JAJSBG010000027.1:1..23277;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000027.1 Genbank gene 1 124 . - . ID=gene-LVR01_07635;Name=LVR01_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07635;partial=true;start_range=.,1 JAJSBG010000027.1 Protein Homology CDS 1 124 . - 0 ID=cds-MCE2619102.1;Parent=gene-LVR01_07635;Dbxref=NCBI_GP:MCE2619102.1;Name=MCE2619102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_07635;partial=true;product=IS5/IS1182 family transposase;protein_id=MCE2619102.1;start_range=.,1;transl_table=11 JAJSBG010000027.1 Genbank gene 460 1413 . + . ID=gene-LVR01_07640;Name=LVR01_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07640 JAJSBG010000027.1 Protein Homology CDS 460 1413 . + 0 ID=cds-MCE2619103.1;Parent=gene-LVR01_07640;Dbxref=NCBI_GP:MCE2619103.1;Name=MCE2619103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000345081.1;locus_tag=LVR01_07640;product=class I SAM-dependent methyltransferase;protein_id=MCE2619103.1;transl_table=11 JAJSBG010000027.1 Genbank gene 1463 2653 . + . ID=gene-LVR01_07645;Name=LVR01_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07645 JAJSBG010000027.1 Protein Homology CDS 1463 2653 . + 0 ID=cds-MCE2619104.1;Parent=gene-LVR01_07645;Dbxref=NCBI_GP:MCE2619104.1;Name=MCE2619104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167779.1;locus_tag=LVR01_07645;product=acetate kinase;protein_id=MCE2619104.1;transl_table=11 JAJSBG010000027.1 Genbank gene 3169 3624 . + . ID=gene-LVR01_07650;Name=LVR01_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07650 JAJSBG010000027.1 Protein Homology CDS 3169 3624 . + 0 ID=cds-MCE2619105.1;Parent=gene-LVR01_07650;Dbxref=NCBI_GP:MCE2619105.1;Name=MCE2619105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500940.1;locus_tag=LVR01_07650;product=hypothetical protein;protein_id=MCE2619105.1;transl_table=11 JAJSBG010000027.1 Genbank gene 3630 4175 . + . ID=gene-LVR01_07655;Name=LVR01_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07655 JAJSBG010000027.1 GeneMarkS-2+ CDS 3630 4175 . + 0 ID=cds-MCE2619106.1;Parent=gene-LVR01_07655;Dbxref=NCBI_GP:MCE2619106.1;Name=MCE2619106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07655;product=glycine/sarcosine/betaine reductase component B subunit;protein_id=MCE2619106.1;transl_table=11 JAJSBG010000027.1 Genbank gene 4502 4873 . + . ID=gene-LVR01_07660;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LVR01_07660 JAJSBG010000027.1 Protein Homology CDS 4502 4873 . + 0 ID=cds-MCE2619107.1;Parent=gene-LVR01_07660;Dbxref=NCBI_GP:MCE2619107.1;Name=MCE2619107.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739244.1;locus_tag=LVR01_07660;product=ribonuclease P protein component;protein_id=MCE2619107.1;transl_table=11 JAJSBG010000027.1 Genbank gene 4848 5672 . + . ID=gene-LVR01_07665;Name=LVR01_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07665 JAJSBG010000027.1 Protein Homology CDS 4848 5672 . + 0 ID=cds-MCE2619108.1;Parent=gene-LVR01_07665;Dbxref=NCBI_GP:MCE2619108.1;Name=MCE2619108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727905.1;locus_tag=LVR01_07665;product=membrane protein insertase YidC;protein_id=MCE2619108.1;transl_table=11 JAJSBG010000027.1 Genbank gene 5690 6676 . + . ID=gene-LVR01_07670;Name=LVR01_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07670 JAJSBG010000027.1 Protein Homology CDS 5690 6676 . + 0 ID=cds-MCE2619109.1;Parent=gene-LVR01_07670;Dbxref=NCBI_GP:MCE2619109.1;Name=MCE2619109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000260012.1;locus_tag=LVR01_07670;product=protein jag;protein_id=MCE2619109.1;transl_table=11 JAJSBG010000027.1 Genbank gene 6727 7350 . + . ID=gene-LVR01_07675;Name=LVR01_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07675 JAJSBG010000027.1 Protein Homology CDS 6727 7350 . + 0 ID=cds-MCE2619110.1;Parent=gene-LVR01_07675;Dbxref=NCBI_GP:MCE2619110.1;Name=MCE2619110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932633.1;locus_tag=LVR01_07675;product=ribonuclease P;protein_id=MCE2619110.1;transl_table=11 JAJSBG010000027.1 Genbank gene 7466 9442 . + . ID=gene-LVR01_07680;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LVR01_07680 JAJSBG010000027.1 Protein Homology CDS 7466 9442 . + 0 ID=cds-MCE2619111.1;Parent=gene-LVR01_07680;Dbxref=NCBI_GP:MCE2619111.1;Name=MCE2619111.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185329.1;locus_tag=LVR01_07680;product=transketolase;protein_id=MCE2619111.1;transl_table=11 JAJSBG010000027.1 Genbank gene 9559 9858 . + . ID=gene-LVR01_07685;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LVR01_07685 JAJSBG010000027.1 Protein Homology CDS 9559 9858 . + 0 ID=cds-MCE2619112.1;Parent=gene-LVR01_07685;Dbxref=NCBI_GP:MCE2619112.1;Name=MCE2619112.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069053.1;locus_tag=LVR01_07685;product=preprotein translocase subunit YajC;protein_id=MCE2619112.1;transl_table=11 JAJSBG010000027.1 Genbank gene 9905 10348 . + . ID=gene-LVR01_07690;Name=LVR01_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07690 JAJSBG010000027.1 Protein Homology CDS 9905 10348 . + 0 ID=cds-MCE2619113.1;Parent=gene-LVR01_07690;Dbxref=NCBI_GP:MCE2619113.1;Name=MCE2619113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737454.1;locus_tag=LVR01_07690;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=MCE2619113.1;transl_table=11 JAJSBG010000027.1 Genbank gene 10335 10745 . + . ID=gene-LVR01_07695;Name=LVR01_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07695 JAJSBG010000027.1 Protein Homology CDS 10335 10745 . + 0 ID=cds-MCE2619114.1;Parent=gene-LVR01_07695;Dbxref=NCBI_GP:MCE2619114.1;Name=MCE2619114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427064.1;locus_tag=LVR01_07695;product=hypothetical protein;protein_id=MCE2619114.1;transl_table=11 JAJSBG010000027.1 Genbank gene 11044 13695 . + . ID=gene-LVR01_07700;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LVR01_07700 JAJSBG010000027.1 Protein Homology CDS 11044 13695 . + 0 ID=cds-MCE2619115.1;Parent=gene-LVR01_07700;Dbxref=NCBI_GP:MCE2619115.1;Name=MCE2619115.1;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763984.1;locus_tag=LVR01_07700;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=MCE2619115.1;transl_table=11 JAJSBG010000027.1 Genbank gene 13819 14739 . + . ID=gene-LVR01_07705;Name=LVR01_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07705 JAJSBG010000027.1 Protein Homology CDS 13819 14739 . + 0 ID=cds-MCE2619116.1;Parent=gene-LVR01_07705;Dbxref=NCBI_GP:MCE2619116.1;Name=MCE2619116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033774.1;locus_tag=LVR01_07705;product=XRE family transcriptional regulator;protein_id=MCE2619116.1;transl_table=11 JAJSBG010000027.1 Genbank gene 15044 15727 . + . ID=gene-LVR01_07710;Name=LVR01_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07710 JAJSBG010000027.1 Protein Homology CDS 15044 15727 . + 0 ID=cds-MCE2619117.1;Parent=gene-LVR01_07710;Dbxref=NCBI_GP:MCE2619117.1;Name=MCE2619117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240536.1;locus_tag=LVR01_07710;product=ABC transporter ATP-binding protein;protein_id=MCE2619117.1;transl_table=11 JAJSBG010000027.1 Genbank gene 15696 16997 . + . ID=gene-LVR01_07715;Name=LVR01_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07715 JAJSBG010000027.1 Protein Homology CDS 15696 16997 . + 0 ID=cds-MCE2619118.1;Parent=gene-LVR01_07715;Dbxref=NCBI_GP:MCE2619118.1;Name=MCE2619118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240534.1;locus_tag=LVR01_07715;product=ABC transporter permease;protein_id=MCE2619118.1;transl_table=11 JAJSBG010000027.1 Genbank gene 17174 18181 . + . ID=gene-LVR01_07720;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LVR01_07720 JAJSBG010000027.1 Protein Homology CDS 17174 18181 . + 0 ID=cds-MCE2619119.1;Parent=gene-LVR01_07720;Dbxref=NCBI_GP:MCE2619119.1;Name=MCE2619119.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=LVR01_07720;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MCE2619119.1;transl_table=11 JAJSBG010000027.1 Genbank gene 18250 19086 . - . ID=gene-LVR01_07725;Name=LVR01_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07725 JAJSBG010000027.1 Protein Homology CDS 18250 19086 . - 0 ID=cds-MCE2619120.1;Parent=gene-LVR01_07725;Dbxref=NCBI_GP:MCE2619120.1;Name=MCE2619120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216776.1;locus_tag=LVR01_07725;product=RluA family pseudouridine synthase;protein_id=MCE2619120.1;transl_table=11 JAJSBG010000027.1 Genbank gene 19212 21407 . + . ID=gene-LVR01_07730;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=LVR01_07730 JAJSBG010000027.1 Protein Homology CDS 19212 21407 . + 0 ID=cds-MCE2619121.1;Parent=gene-LVR01_07730;Dbxref=NCBI_GP:MCE2619121.1;Name=MCE2619121.1;gbkey=CDS;gene=pbp2a;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762602.1;locus_tag=LVR01_07730;product=penicillin-binding protein PBP2A;protein_id=MCE2619121.1;transl_table=11 JAJSBG010000027.1 Genbank gene 21460 21612 . + . ID=gene-LVR01_07735;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LVR01_07735 JAJSBG010000027.1 Protein Homology CDS 21460 21612 . + 0 ID=cds-MCE2619122.1;Parent=gene-LVR01_07735;Dbxref=NCBI_GP:MCE2619122.1;Name=MCE2619122.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912025.1;locus_tag=LVR01_07735;product=50S ribosomal protein L33;protein_id=MCE2619122.1;transl_table=11 JAJSBG010000027.1 Genbank gene 21622 21798 . + . ID=gene-LVR01_07740;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LVR01_07740 JAJSBG010000027.1 Protein Homology CDS 21622 21798 . + 0 ID=cds-MCE2619123.1;Parent=gene-LVR01_07740;Dbxref=NCBI_GP:MCE2619123.1;Name=MCE2619123.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211016.1;locus_tag=LVR01_07740;product=preprotein translocase subunit SecE;protein_id=MCE2619123.1;transl_table=11 JAJSBG010000027.1 Genbank gene 21853 22389 . + . ID=gene-LVR01_07745;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LVR01_07745 JAJSBG010000027.1 Protein Homology CDS 21853 22389 . + 0 ID=cds-MCE2619124.1;Parent=gene-LVR01_07745;Dbxref=NCBI_GP:MCE2619124.1;Name=MCE2619124.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376740.1;locus_tag=LVR01_07745;product=transcription termination/antitermination protein NusG;protein_id=MCE2619124.1;transl_table=11 JAJSBG010000027.1 Genbank gene 22510 22989 . + . ID=gene-LVR01_07750;Name=LVR01_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07750 JAJSBG010000027.1 Protein Homology CDS 22510 22989 . + 0 ID=cds-MCE2619125.1;Parent=gene-LVR01_07750;Dbxref=NCBI_GP:MCE2619125.1;Name=MCE2619125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588926.1;locus_tag=LVR01_07750;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCE2619125.1;transl_table=11 JAJSBG010000027.1 Genbank gene 23083 23154 . + . ID=gene-LVR01_07755;Name=LVR01_07755;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_07755 JAJSBG010000027.1 tRNAscan-SE tRNA 23083 23154 . + . ID=rna-LVR01_07755;Parent=gene-LVR01_07755;anticodon=(pos:23116..23118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_07755;product=tRNA-Glu JAJSBG010000027.1 tRNAscan-SE exon 23083 23154 . + . ID=exon-LVR01_07755-1;Parent=rna-LVR01_07755;anticodon=(pos:23116..23118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_07755;product=tRNA-Glu ##sequence-region JAJSBG010000028.1 1 22980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000028.1 Genbank region 1 22980 . + . ID=JAJSBG010000028.1:1..22980;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000028.1 Genbank gene 1 149 . + . ID=gene-LVR01_07760;Name=LVR01_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07760;partial=true;start_range=.,1 JAJSBG010000028.1 Protein Homology CDS 1 149 . + 2 ID=cds-MCE2619126.1;Parent=gene-LVR01_07760;Dbxref=NCBI_GP:MCE2619126.1;Name=MCE2619126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=LVR01_07760;partial=true;product=transposase;protein_id=MCE2619126.1;start_range=.,1;transl_table=11 JAJSBG010000028.1 Genbank pseudogene 261 440 . - . ID=gene-LVR01_07765;Name=LVR01_07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07765;pseudo=true JAJSBG010000028.1 Protein Homology CDS 261 440 . - 0 ID=cds-LVR01_07765;Parent=gene-LVR01_07765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698569.1;locus_tag=LVR01_07765;product=choline-binding protein;pseudo=true;transl_table=11 JAJSBG010000028.1 Genbank gene 526 954 . - . ID=gene-LVR01_07770;Name=LVR01_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07770 JAJSBG010000028.1 GeneMarkS-2+ CDS 526 954 . - 0 ID=cds-MCE2619127.1;Parent=gene-LVR01_07770;Dbxref=NCBI_GP:MCE2619127.1;Name=MCE2619127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07770;product=choline-binding protein C;protein_id=MCE2619127.1;transl_table=11 JAJSBG010000028.1 Genbank gene 923 1732 . - . ID=gene-LVR01_07775;Name=LVR01_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07775 JAJSBG010000028.1 Protein Homology CDS 923 1732 . - 0 ID=cds-MCE2619128.1;Parent=gene-LVR01_07775;Dbxref=NCBI_GP:MCE2619128.1;Name=MCE2619128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593565.1;locus_tag=LVR01_07775;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2619128.1;transl_table=11 JAJSBG010000028.1 Genbank gene 2004 2225 . + . ID=gene-LVR01_07780;Name=LVR01_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07780 JAJSBG010000028.1 Protein Homology CDS 2004 2225 . + 0 ID=cds-MCE2619129.1;Parent=gene-LVR01_07780;Dbxref=NCBI_GP:MCE2619129.1;Name=MCE2619129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602450.1;locus_tag=LVR01_07780;product=hypothetical protein;protein_id=MCE2619129.1;transl_table=11 JAJSBG010000028.1 Genbank gene 2267 2938 . + . ID=gene-LVR01_07785;Name=LVR01_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07785 JAJSBG010000028.1 Protein Homology CDS 2267 2938 . + 0 ID=cds-MCE2619130.1;Parent=gene-LVR01_07785;Dbxref=NCBI_GP:MCE2619130.1;Name=MCE2619130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746014.1;locus_tag=LVR01_07785;product=CPBP family intramembrane metalloprotease;protein_id=MCE2619130.1;transl_table=11 JAJSBG010000028.1 Genbank pseudogene 2991 3196 . - . ID=gene-LVR01_07790;Name=LVR01_07790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07790;pseudo=true JAJSBG010000028.1 Protein Homology CDS 2991 3196 . - 0 ID=cds-LVR01_07790;Parent=gene-LVR01_07790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842783.1;locus_tag=LVR01_07790;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 JAJSBG010000028.1 Genbank gene 3189 4097 . + . ID=gene-LVR01_07795;Name=LVR01_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07795 JAJSBG010000028.1 Protein Homology CDS 3189 4097 . + 0 ID=cds-MCE2619131.1;Parent=gene-LVR01_07795;Dbxref=NCBI_GP:MCE2619131.1;Name=MCE2619131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025716.1;locus_tag=LVR01_07795;product=LysR family transcriptional regulator;protein_id=MCE2619131.1;transl_table=11 JAJSBG010000028.1 Genbank gene 4094 4555 . + . ID=gene-LVR01_07800;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LVR01_07800 JAJSBG010000028.1 Protein Homology CDS 4094 4555 . + 0 ID=cds-MCE2619132.1;Parent=gene-LVR01_07800;Dbxref=NCBI_GP:MCE2619132.1;Name=MCE2619132.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399310.1;locus_tag=LVR01_07800;product=signal peptidase II;protein_id=MCE2619132.1;transl_table=11 JAJSBG010000028.1 Genbank gene 4545 5432 . + . ID=gene-LVR01_07805;Name=LVR01_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07805 JAJSBG010000028.1 Protein Homology CDS 4545 5432 . + 0 ID=cds-MCE2619133.1;Parent=gene-LVR01_07805;Dbxref=NCBI_GP:MCE2619133.1;Name=MCE2619133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864132.1;locus_tag=LVR01_07805;product=RluA family pseudouridine synthase;protein_id=MCE2619133.1;transl_table=11 JAJSBG010000028.1 Genbank gene 5435 7318 . + . ID=gene-LVR01_07810;Name=cbpE;gbkey=Gene;gene=cbpE;gene_biotype=protein_coding;gene_synonym=pce;locus_tag=LVR01_07810 JAJSBG010000028.1 Protein Homology CDS 5435 7318 . + 0 ID=cds-MCE2619134.1;Parent=gene-LVR01_07810;Dbxref=NCBI_GP:MCE2619134.1;Name=MCE2619134.1;gbkey=CDS;gene=cbpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728269.1;locus_tag=LVR01_07810;product=phosphorylcholine esterase CbpE;protein_id=MCE2619134.1;transl_table=11 JAJSBG010000028.1 Genbank gene 7419 8528 . + . ID=gene-LVR01_07815;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LVR01_07815 JAJSBG010000028.1 Protein Homology CDS 7419 8528 . + 0 ID=cds-MCE2619135.1;Parent=gene-LVR01_07815;Dbxref=NCBI_GP:MCE2619135.1;Name=MCE2619135.1;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875748.1;locus_tag=LVR01_07815;product=glutamate 5-kinase;protein_id=MCE2619135.1;transl_table=11 JAJSBG010000028.1 Genbank gene 8538 9800 . + . ID=gene-LVR01_07820;Name=LVR01_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07820 JAJSBG010000028.1 Protein Homology CDS 8538 9800 . + 0 ID=cds-MCE2619136.1;Parent=gene-LVR01_07820;Dbxref=NCBI_GP:MCE2619136.1;Name=MCE2619136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398652.1;locus_tag=LVR01_07820;product=glutamate-5-semialdehyde dehydrogenase;protein_id=MCE2619136.1;transl_table=11 JAJSBG010000028.1 Genbank gene 9805 10602 . + . ID=gene-LVR01_07825;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LVR01_07825 JAJSBG010000028.1 Protein Homology CDS 9805 10602 . + 0 ID=cds-MCE2619137.1;Parent=gene-LVR01_07825;Dbxref=NCBI_GP:MCE2619137.1;Name=MCE2619137.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254731.1;locus_tag=LVR01_07825;product=pyrroline-5-carboxylate reductase;protein_id=MCE2619137.1;transl_table=11 JAJSBG010000028.1 Genbank gene 10831 11469 . + . ID=gene-LVR01_07830;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LVR01_07830 JAJSBG010000028.1 Protein Homology CDS 10831 11469 . + 0 ID=cds-MCE2619138.1;Parent=gene-LVR01_07830;Dbxref=NCBI_GP:MCE2619138.1;Name=MCE2619138.1;gbkey=CDS;gene=tmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261378.1;locus_tag=LVR01_07830;product=dTMP kinase;protein_id=MCE2619138.1;transl_table=11 JAJSBG010000028.1 Genbank gene 11466 12356 . + . ID=gene-LVR01_07835;Name=LVR01_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07835 JAJSBG010000028.1 Protein Homology CDS 11466 12356 . + 0 ID=cds-MCE2619139.1;Parent=gene-LVR01_07835;Dbxref=NCBI_GP:MCE2619139.1;Name=MCE2619139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806705.1;locus_tag=LVR01_07835;product=DNA polymerase III subunit delta';protein_id=MCE2619139.1;transl_table=11 JAJSBG010000028.1 Genbank gene 12396 12713 . + . ID=gene-LVR01_07840;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=LVR01_07840 JAJSBG010000028.1 Protein Homology CDS 12396 12713 . + 0 ID=cds-MCE2619140.1;Parent=gene-LVR01_07840;Dbxref=NCBI_GP:MCE2619140.1;Name=MCE2619140.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358230.1;locus_tag=LVR01_07840;product=DNA replication initiation control protein YabA;protein_id=MCE2619140.1;transl_table=11 JAJSBG010000028.1 Genbank gene 12716 13594 . + . ID=gene-LVR01_07845;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LVR01_07845 JAJSBG010000028.1 Protein Homology CDS 12716 13594 . + 0 ID=cds-MCE2619141.1;Parent=gene-LVR01_07845;Dbxref=NCBI_GP:MCE2619141.1;Name=MCE2619141.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166890.1;locus_tag=LVR01_07845;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=MCE2619141.1;transl_table=11 JAJSBG010000028.1 Genbank gene 14068 15402 . + . ID=gene-LVR01_07850;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=LVR01_07850 JAJSBG010000028.1 Protein Homology CDS 14068 15402 . + 0 ID=cds-MCE2619142.1;Parent=gene-LVR01_07850;Dbxref=NCBI_GP:MCE2619142.1;Name=MCE2619142.1;gbkey=CDS;gene=trmFO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083696.1;locus_tag=LVR01_07850;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=MCE2619142.1;transl_table=11 JAJSBG010000028.1 Genbank gene 15486 16223 . + . ID=gene-LVR01_07855;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LVR01_07855 JAJSBG010000028.1 Protein Homology CDS 15486 16223 . + 0 ID=cds-MCE2619143.1;Parent=gene-LVR01_07855;Dbxref=NCBI_GP:MCE2619143.1;Name=MCE2619143.1;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013002.1;locus_tag=LVR01_07855;product=UMP kinase;protein_id=MCE2619143.1;transl_table=11 JAJSBG010000028.1 Genbank gene 16232 16789 . + . ID=gene-LVR01_07860;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LVR01_07860 JAJSBG010000028.1 Protein Homology CDS 16232 16789 . + 0 ID=cds-MCE2619144.1;Parent=gene-LVR01_07860;Dbxref=NCBI_GP:MCE2619144.1;Name=MCE2619144.1;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=LVR01_07860;product=ribosome recycling factor;protein_id=MCE2619144.1;transl_table=11 JAJSBG010000028.1 Genbank gene 16849 17703 . + . ID=gene-LVR01_07865;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=LVR01_07865 JAJSBG010000028.1 Protein Homology CDS 16849 17703 . + 0 ID=cds-MCE2619145.1;Parent=gene-LVR01_07865;Dbxref=NCBI_GP:MCE2619145.1;Name=MCE2619145.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095444.1;locus_tag=LVR01_07865;product=RNA-binding virulence regulatory protein CvfB;protein_id=MCE2619145.1;transl_table=11 JAJSBG010000028.1 Genbank gene 17712 17927 . + . ID=gene-LVR01_07870;Name=LVR01_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07870 JAJSBG010000028.1 Protein Homology CDS 17712 17927 . + 0 ID=cds-MCE2619146.1;Parent=gene-LVR01_07870;Dbxref=NCBI_GP:MCE2619146.1;Name=MCE2619146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894860.1;locus_tag=LVR01_07870;product=YozE family protein;protein_id=MCE2619146.1;transl_table=11 JAJSBG010000028.1 Genbank pseudogene 18012 19017 . + . ID=gene-LVR01_07875;Name=LVR01_07875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07875;pseudo=true JAJSBG010000028.1 Protein Homology CDS 18012 19017 . + 0 ID=cds-LVR01_07875;Parent=gene-LVR01_07875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658165.1;locus_tag=LVR01_07875;product=PhoH family protein;pseudo=true;transl_table=11 JAJSBG010000028.1 Genbank gene 19230 19799 . + . ID=gene-LVR01_07880;Name=LVR01_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07880 JAJSBG010000028.1 Protein Homology CDS 19230 19799 . + 0 ID=cds-MCE2619147.1;Parent=gene-LVR01_07880;Dbxref=NCBI_GP:MCE2619147.1;Name=MCE2619147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443767.1;locus_tag=LVR01_07880;product=GNAT family N-acetyltransferase;protein_id=MCE2619147.1;transl_table=11 JAJSBG010000028.1 Genbank gene 19867 20517 . + . ID=gene-LVR01_07885;Name=LVR01_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07885 JAJSBG010000028.1 Protein Homology CDS 19867 20517 . + 0 ID=cds-MCE2619148.1;Parent=gene-LVR01_07885;Dbxref=NCBI_GP:MCE2619148.1;Name=MCE2619148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387331.1;locus_tag=LVR01_07885;product=helix-hairpin-helix domain-containing protein;protein_id=MCE2619148.1;transl_table=11 JAJSBG010000028.1 Genbank gene 20501 22735 . + . ID=gene-LVR01_07890;Name=LVR01_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07890 JAJSBG010000028.1 Protein Homology CDS 20501 22735 . + 0 ID=cds-MCE2619149.1;Parent=gene-LVR01_07890;Dbxref=NCBI_GP:MCE2619149.1;Name=MCE2619149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398664.1;locus_tag=LVR01_07890;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=MCE2619149.1;transl_table=11 JAJSBG010000028.1 Genbank pseudogene 22793 22980 . + . ID=gene-LVR01_07895;Name=LVR01_07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_07895;pseudo=true JAJSBG010000028.1 Protein Homology CDS 22793 22980 . + 0 ID=cds-LVR01_07895;Parent=gene-LVR01_07895;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_07895;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000029.1 1 22784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000029.1 Genbank region 1 22784 . + . ID=JAJSBG010000029.1:1..22784;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000029.1 Genbank gene 221 1981 . + . ID=gene-LVR01_07900;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LVR01_07900 JAJSBG010000029.1 Protein Homology CDS 221 1981 . + 0 ID=cds-MCE2619150.1;Parent=gene-LVR01_07900;Dbxref=NCBI_GP:MCE2619150.1;Name=MCE2619150.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227865.1;locus_tag=LVR01_07900;product=DNA primase;protein_id=MCE2619150.1;transl_table=11 JAJSBG010000029.1 Genbank gene 1984 3093 . + . ID=gene-LVR01_07905;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LVR01_07905 JAJSBG010000029.1 Protein Homology CDS 1984 3093 . + 0 ID=cds-MCE2619151.1;Parent=gene-LVR01_07905;Dbxref=NCBI_GP:MCE2619151.1;Name=MCE2619151.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201905.1;locus_tag=LVR01_07905;product=RNA polymerase sigma factor RpoD;protein_id=MCE2619151.1;transl_table=11 JAJSBG010000029.1 Genbank gene 3108 3437 . + . ID=gene-LVR01_07910;Name=LVR01_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07910 JAJSBG010000029.1 Protein Homology CDS 3108 3437 . + 0 ID=cds-MCE2619152.1;Parent=gene-LVR01_07910;Dbxref=NCBI_GP:MCE2619152.1;Name=MCE2619152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331934.1;locus_tag=LVR01_07910;product=metal-sulfur cluster assembly factor;protein_id=MCE2619152.1;transl_table=11 JAJSBG010000029.1 Genbank gene 3552 4595 . + . ID=gene-LVR01_07915;Name=cpoA;gbkey=Gene;gene=cpoA;gene_biotype=protein_coding;locus_tag=LVR01_07915 JAJSBG010000029.1 Protein Homology CDS 3552 4595 . + 0 ID=cds-MCE2619153.1;Parent=gene-LVR01_07915;Dbxref=NCBI_GP:MCE2619153.1;Name=MCE2619153.1;gbkey=CDS;gene=cpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398149.1;locus_tag=LVR01_07915;product=alpha-galactosylglucosyldiacylglycerol synthase;protein_id=MCE2619153.1;transl_table=11 JAJSBG010000029.1 Genbank gene 4611 5936 . + . ID=gene-LVR01_07920;Name=LVR01_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07920 JAJSBG010000029.1 Protein Homology CDS 4611 5936 . + 0 ID=cds-MCE2619154.1;Parent=gene-LVR01_07920;Dbxref=NCBI_GP:MCE2619154.1;Name=MCE2619154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399488.1;locus_tag=LVR01_07920;product=glycosyltransferase family 4 protein;protein_id=MCE2619154.1;transl_table=11 JAJSBG010000029.1 Genbank gene 5965 6141 . + . ID=gene-LVR01_07925;Name=LVR01_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07925 JAJSBG010000029.1 Protein Homology CDS 5965 6141 . + 0 ID=cds-MCE2619155.1;Parent=gene-LVR01_07925;Dbxref=NCBI_GP:MCE2619155.1;Name=MCE2619155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399487.1;locus_tag=LVR01_07925;product=PspC domain-containing protein;protein_id=MCE2619155.1;transl_table=11 JAJSBG010000029.1 Genbank gene 6200 6334 . + . ID=gene-LVR01_07930;Name=LVR01_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07930 JAJSBG010000029.1 Protein Homology CDS 6200 6334 . + 0 ID=cds-MCE2619156.1;Parent=gene-LVR01_07930;Dbxref=NCBI_GP:MCE2619156.1;Name=MCE2619156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863859.1;locus_tag=LVR01_07930;product=DUF4044 domain-containing protein;protein_id=MCE2619156.1;transl_table=11 JAJSBG010000029.1 Genbank gene 6398 7708 . + . ID=gene-LVR01_07935;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LVR01_07935 JAJSBG010000029.1 Protein Homology CDS 6398 7708 . + 0 ID=cds-MCE2619157.1;Parent=gene-LVR01_07935;Dbxref=NCBI_GP:MCE2619157.1;Name=MCE2619157.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984148.1;locus_tag=LVR01_07935;product=GTPase ObgE;protein_id=MCE2619157.1;transl_table=11 JAJSBG010000029.1 Genbank gene 7718 7876 . + . ID=gene-LVR01_07940;Name=LVR01_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07940 JAJSBG010000029.1 Protein Homology CDS 7718 7876 . + 0 ID=cds-MCE2619158.1;Parent=gene-LVR01_07940;Dbxref=NCBI_GP:MCE2619158.1;Name=MCE2619158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841691.1;locus_tag=LVR01_07940;product=hypothetical protein;protein_id=MCE2619158.1;transl_table=11 JAJSBG010000029.1 Genbank gene 8678 8848 . - . ID=gene-LVR01_07945;Name=LVR01_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07945 JAJSBG010000029.1 GeneMarkS-2+ CDS 8678 8848 . - 0 ID=cds-MCE2619159.1;Parent=gene-LVR01_07945;Dbxref=NCBI_GP:MCE2619159.1;Name=MCE2619159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_07945;product=hypothetical protein;protein_id=MCE2619159.1;transl_table=11 JAJSBG010000029.1 Genbank gene 8983 10242 . + . ID=gene-LVR01_07950;Name=LVR01_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07950 JAJSBG010000029.1 Protein Homology CDS 8983 10242 . + 0 ID=cds-MCE2619160.1;Parent=gene-LVR01_07950;Dbxref=NCBI_GP:MCE2619160.1;Name=MCE2619160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227095.1;locus_tag=LVR01_07950;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MCE2619160.1;transl_table=11 JAJSBG010000029.1 Genbank gene 10258 10809 . + . ID=gene-LVR01_07955;Name=LVR01_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07955 JAJSBG010000029.1 Protein Homology CDS 10258 10809 . + 0 ID=cds-MCE2619161.1;Parent=gene-LVR01_07955;Dbxref=NCBI_GP:MCE2619161.1;Name=MCE2619161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521687.1;locus_tag=LVR01_07955;product=GNAT family N-acetyltransferase;protein_id=MCE2619161.1;transl_table=11 JAJSBG010000029.1 Genbank gene 10802 12079 . + . ID=gene-LVR01_07960;Name=spxR;gbkey=Gene;gene=spxR;gene_biotype=protein_coding;locus_tag=LVR01_07960 JAJSBG010000029.1 Protein Homology CDS 10802 12079 . + 0 ID=cds-MCE2619162.1;Parent=gene-LVR01_07960;Dbxref=NCBI_GP:MCE2619162.1;Name=MCE2619162.1;gbkey=CDS;gene=spxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465747.1;locus_tag=LVR01_07960;product=CBS-HotDog domain-containing transcription factor SpxR;protein_id=MCE2619162.1;transl_table=11 JAJSBG010000029.1 Genbank gene 12095 12955 . + . ID=gene-LVR01_07965;Name=LVR01_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07965 JAJSBG010000029.1 Protein Homology CDS 12095 12955 . + 0 ID=cds-MCE2619163.1;Parent=gene-LVR01_07965;Dbxref=NCBI_GP:MCE2619163.1;Name=MCE2619163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903404.1;locus_tag=LVR01_07965;product=methionyl aminopeptidase;protein_id=MCE2619163.1;transl_table=11 JAJSBG010000029.1 Genbank gene 13472 15763 . + . ID=gene-LVR01_07970;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=LVR01_07970 JAJSBG010000029.1 Protein Homology CDS 13472 15763 . + 0 ID=cds-MCE2619164.1;Parent=gene-LVR01_07970;Dbxref=NCBI_GP:MCE2619164.1;Name=MCE2619164.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992850.1;locus_tag=LVR01_07970;product=DNA helicase PcrA;protein_id=MCE2619164.1;transl_table=11 JAJSBG010000029.1 Genbank gene 15806 16486 . + . ID=gene-LVR01_07975;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LVR01_07975 JAJSBG010000029.1 Protein Homology CDS 15806 16486 . + 0 ID=cds-MCE2619165.1;Parent=gene-LVR01_07975;Dbxref=NCBI_GP:MCE2619165.1;Name=MCE2619165.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286923.1;locus_tag=LVR01_07975;product=DNA repair protein RadC;protein_id=MCE2619165.1;transl_table=11 JAJSBG010000029.1 Genbank gene 16483 17172 . - . ID=gene-LVR01_07980;Name=LVR01_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07980 JAJSBG010000029.1 Protein Homology CDS 16483 17172 . - 0 ID=cds-MCE2619166.1;Parent=gene-LVR01_07980;Dbxref=NCBI_GP:MCE2619166.1;Name=MCE2619166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399441.1;locus_tag=LVR01_07980;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=MCE2619166.1;transl_table=11 JAJSBG010000029.1 Genbank gene 17190 17831 . - . ID=gene-LVR01_07985;Name=LVR01_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07985 JAJSBG010000029.1 Protein Homology CDS 17190 17831 . - 0 ID=cds-MCE2619167.1;Parent=gene-LVR01_07985;Dbxref=NCBI_GP:MCE2619167.1;Name=MCE2619167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653420.1;locus_tag=LVR01_07985;product=redox-sensing transcriptional repressor Rex;protein_id=MCE2619167.1;transl_table=11 JAJSBG010000029.1 Genbank gene 17914 18129 . - . ID=gene-LVR01_07990;Name=LVR01_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07990 JAJSBG010000029.1 Protein Homology CDS 17914 18129 . - 0 ID=cds-MCE2619168.1;Parent=gene-LVR01_07990;Dbxref=NCBI_GP:MCE2619168.1;Name=MCE2619168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462494.1;locus_tag=LVR01_07990;product=DUF4649 family protein;protein_id=MCE2619168.1;transl_table=11 JAJSBG010000029.1 Genbank gene 18137 18484 . - . ID=gene-LVR01_07995;Name=LVR01_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_07995 JAJSBG010000029.1 Protein Homology CDS 18137 18484 . - 0 ID=cds-MCE2619169.1;Parent=gene-LVR01_07995;Dbxref=NCBI_GP:MCE2619169.1;Name=MCE2619169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863538.1;locus_tag=LVR01_07995;product=DUF1831 domain-containing protein;protein_id=MCE2619169.1;transl_table=11 JAJSBG010000029.1 Genbank gene 18489 19604 . - . ID=gene-LVR01_08000;Name=LVR01_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08000 JAJSBG010000029.1 Protein Homology CDS 18489 19604 . - 0 ID=cds-MCE2619170.1;Parent=gene-LVR01_08000;Dbxref=NCBI_GP:MCE2619170.1;Name=MCE2619170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639661.1;locus_tag=LVR01_08000;product=cysteine desulfurase;protein_id=MCE2619170.1;transl_table=11 JAJSBG010000029.1 Genbank gene 19614 20573 . - . ID=gene-LVR01_08005;Name=LVR01_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08005 JAJSBG010000029.1 Protein Homology CDS 19614 20573 . - 0 ID=cds-MCE2619171.1;Parent=gene-LVR01_08005;Dbxref=NCBI_GP:MCE2619171.1;Name=MCE2619171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280885.1;locus_tag=LVR01_08005;product=ribose-phosphate diphosphokinase;protein_id=MCE2619171.1;transl_table=11 JAJSBG010000029.1 Genbank gene 20686 21255 . - . ID=gene-LVR01_08010;Name=LVR01_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08010 JAJSBG010000029.1 Protein Homology CDS 20686 21255 . - 0 ID=cds-MCE2619172.1;Parent=gene-LVR01_08010;Dbxref=NCBI_GP:MCE2619172.1;Name=MCE2619172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681289.1;locus_tag=LVR01_08010;product=CYTH domain-containing protein;protein_id=MCE2619172.1;transl_table=11 JAJSBG010000029.1 Genbank gene 21388 22533 . - . ID=gene-LVR01_08015;Name=LVR01_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08015 JAJSBG010000029.1 Protein Homology CDS 21388 22533 . - 0 ID=cds-MCE2619173.1;Parent=gene-LVR01_08015;Dbxref=NCBI_GP:MCE2619173.1;Name=MCE2619173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592975.1;locus_tag=LVR01_08015;product=site-specific integrase;protein_id=MCE2619173.1;transl_table=11 ##sequence-region JAJSBG010000002.1 1 109900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000002.1 Genbank region 1 109900 . + . ID=JAJSBG010000002.1:1..109900;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000002.1 Genbank gene 178 636 . - . ID=gene-LVR01_01085;Name=LVR01_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01085 JAJSBG010000002.1 Protein Homology CDS 178 636 . - 0 ID=cds-MCE2617902.1;Parent=gene-LVR01_01085;Dbxref=NCBI_GP:MCE2617902.1;Name=MCE2617902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399107.1;locus_tag=LVR01_01085;product=DUF3021 domain-containing protein;protein_id=MCE2617902.1;transl_table=11 JAJSBG010000002.1 Genbank gene 633 1073 . - . ID=gene-LVR01_01090;Name=LVR01_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01090 JAJSBG010000002.1 Protein Homology CDS 633 1073 . - 0 ID=cds-MCE2617903.1;Parent=gene-LVR01_01090;Dbxref=NCBI_GP:MCE2617903.1;Name=MCE2617903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861967.1;locus_tag=LVR01_01090;product=LytTR family DNA-binding domain-containing protein;protein_id=MCE2617903.1;transl_table=11 JAJSBG010000002.1 Genbank gene 1279 3228 . + . ID=gene-LVR01_01095;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LVR01_01095 JAJSBG010000002.1 Protein Homology CDS 1279 3228 . + 0 ID=cds-MCE2617904.1;Parent=gene-LVR01_01095;Dbxref=NCBI_GP:MCE2617904.1;Name=MCE2617904.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250478.1;locus_tag=LVR01_01095;product=DNA mismatch repair endonuclease MutL;protein_id=MCE2617904.1;transl_table=11 JAJSBG010000002.1 Genbank gene 3553 4020 . - . ID=gene-LVR01_01100;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LVR01_01100 JAJSBG010000002.1 Protein Homology CDS 3553 4020 . - 0 ID=cds-MCE2617905.1;Parent=gene-LVR01_01100;Dbxref=NCBI_GP:MCE2617905.1;Name=MCE2617905.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001099498.1;locus_tag=LVR01_01100;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=MCE2617905.1;transl_table=11 JAJSBG010000002.1 Genbank gene 4021 5226 . - . ID=gene-LVR01_01105;Name=LVR01_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01105 JAJSBG010000002.1 Protein Homology CDS 4021 5226 . - 0 ID=cds-MCE2617906.1;Parent=gene-LVR01_01105;Dbxref=NCBI_GP:MCE2617906.1;Name=MCE2617906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842537.1;locus_tag=LVR01_01105;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=MCE2617906.1;transl_table=11 JAJSBG010000002.1 Genbank gene 5246 5881 . - . ID=gene-LVR01_01110;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LVR01_01110 JAJSBG010000002.1 Protein Homology CDS 5246 5881 . - 0 ID=cds-MCE2617907.1;Parent=gene-LVR01_01110;Dbxref=NCBI_GP:MCE2617907.1;Name=MCE2617907.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493842.1;locus_tag=LVR01_01110;product=riboflavin synthase;protein_id=MCE2617907.1;transl_table=11 JAJSBG010000002.1 Genbank gene 5866 6966 . - . ID=gene-LVR01_01115;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LVR01_01115 JAJSBG010000002.1 Protein Homology CDS 5866 6966 . - 0 ID=cds-MCE2617908.1;Parent=gene-LVR01_01115;Dbxref=NCBI_GP:MCE2617908.1;Name=MCE2617908.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284110.1;locus_tag=LVR01_01115;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=MCE2617908.1;transl_table=11 JAJSBG010000002.1 cmsearch riboswitch 7100 7214 . - . ID=id-JAJSBG010000002.1:7100..7214;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000002.1 Genbank gene 7371 7964 . + . ID=gene-LVR01_01120;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LVR01_01120 JAJSBG010000002.1 Protein Homology CDS 7371 7964 . + 0 ID=cds-MCE2617909.1;Parent=gene-LVR01_01120;Dbxref=NCBI_GP:MCE2617909.1;Name=MCE2617909.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271492.1;locus_tag=LVR01_01120;product=Holliday junction branch migration protein RuvA;protein_id=MCE2617909.1;transl_table=11 JAJSBG010000002.1 Genbank gene 7974 8537 . + . ID=gene-LVR01_01125;Name=LVR01_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01125 JAJSBG010000002.1 Protein Homology CDS 7974 8537 . + 0 ID=cds-MCE2617910.1;Parent=gene-LVR01_01125;Dbxref=NCBI_GP:MCE2617910.1;Name=MCE2617910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166575.1;locus_tag=LVR01_01125;product=DNA-3-methyladenine glycosylase I;protein_id=MCE2617910.1;transl_table=11 JAJSBG010000002.1 Genbank gene 8534 9211 . + . ID=gene-LVR01_01130;Name=LVR01_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01130 JAJSBG010000002.1 Protein Homology CDS 8534 9211 . + 0 ID=cds-MCE2617911.1;Parent=gene-LVR01_01130;Dbxref=NCBI_GP:MCE2617911.1;Name=MCE2617911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987430.1;locus_tag=LVR01_01130;product=CPBP family intramembrane metalloprotease;protein_id=MCE2617911.1;transl_table=11 JAJSBG010000002.1 Genbank gene 9348 10379 . - . ID=gene-LVR01_01135;Name=LVR01_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01135 JAJSBG010000002.1 Protein Homology CDS 9348 10379 . - 0 ID=cds-MCE2617912.1;Parent=gene-LVR01_01135;Dbxref=NCBI_GP:MCE2617912.1;Name=MCE2617912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255096.1;locus_tag=LVR01_01135;product=LD-carboxypeptidase;protein_id=MCE2617912.1;transl_table=11 JAJSBG010000002.1 Genbank gene 10693 11376 . - . ID=gene-LVR01_01140;Name=LVR01_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01140 JAJSBG010000002.1 Protein Homology CDS 10693 11376 . - 0 ID=cds-MCE2617913.1;Parent=gene-LVR01_01140;Dbxref=NCBI_GP:MCE2617913.1;Name=MCE2617913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078028.1;locus_tag=LVR01_01140;product=DUF1129 domain-containing protein;protein_id=MCE2617913.1;transl_table=11 JAJSBG010000002.1 Genbank gene 11388 12332 . - . ID=gene-LVR01_01145;Name=LVR01_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01145 JAJSBG010000002.1 Protein Homology CDS 11388 12332 . - 0 ID=cds-MCE2617914.1;Parent=gene-LVR01_01145;Dbxref=NCBI_GP:MCE2617914.1;Name=MCE2617914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250490.1;locus_tag=LVR01_01145;product=magnesium transporter CorA family protein;protein_id=MCE2617914.1;transl_table=11 JAJSBG010000002.1 Genbank gene 12464 15295 . + . ID=gene-LVR01_01150;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LVR01_01150 JAJSBG010000002.1 Protein Homology CDS 12464 15295 . + 0 ID=cds-MCE2617915.1;Parent=gene-LVR01_01150;Dbxref=NCBI_GP:MCE2617915.1;Name=MCE2617915.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269736.1;locus_tag=LVR01_01150;product=excinuclease ABC subunit UvrA;protein_id=MCE2617915.1;transl_table=11 JAJSBG010000002.1 Genbank gene 15288 16349 . + . ID=gene-LVR01_01155;Name=LVR01_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01155 JAJSBG010000002.1 Protein Homology CDS 15288 16349 . + 0 ID=cds-MCE2617916.1;Parent=gene-LVR01_01155;Dbxref=NCBI_GP:MCE2617916.1;Name=MCE2617916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466358.1;locus_tag=LVR01_01155;product=Xaa-Pro peptidase family protein;protein_id=MCE2617916.1;transl_table=11 JAJSBG010000002.1 Genbank gene 16481 16879 . + . ID=gene-LVR01_01160;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=LVR01_01160 JAJSBG010000002.1 Protein Homology CDS 16481 16879 . + 0 ID=cds-MCE2617917.1;Parent=gene-LVR01_01160;Dbxref=NCBI_GP:MCE2617917.1;Name=MCE2617917.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768833.1;locus_tag=LVR01_01160;product=transcriptional regulator Spx;protein_id=MCE2617917.1;transl_table=11 JAJSBG010000002.1 Genbank gene 16945 17514 . + . ID=gene-LVR01_01165;Name=LVR01_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01165 JAJSBG010000002.1 Protein Homology CDS 16945 17514 . + 0 ID=cds-MCE2617918.1;Parent=gene-LVR01_01165;Dbxref=NCBI_GP:MCE2617918.1;Name=MCE2617918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725124.1;locus_tag=LVR01_01165;product=transcriptional regulator;protein_id=MCE2617918.1;transl_table=11 JAJSBG010000002.1 Genbank gene 17601 17867 . + . ID=gene-LVR01_01170;Name=LVR01_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01170 JAJSBG010000002.1 Protein Homology CDS 17601 17867 . + 0 ID=cds-MCE2617919.1;Parent=gene-LVR01_01170;Dbxref=NCBI_GP:MCE2617919.1;Name=MCE2617919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250500.1;locus_tag=LVR01_01170;product=IreB family regulatory phosphoprotein;protein_id=MCE2617919.1;transl_table=11 JAJSBG010000002.1 Genbank gene 17871 18290 . + . ID=gene-LVR01_01175;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LVR01_01175 JAJSBG010000002.1 Protein Homology CDS 17871 18290 . + 0 ID=cds-MCE2617920.1;Parent=gene-LVR01_01175;Dbxref=NCBI_GP:MCE2617920.1;Name=MCE2617920.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939356.1;locus_tag=LVR01_01175;product=Holliday junction resolvase RuvX;protein_id=MCE2617920.1;transl_table=11 JAJSBG010000002.1 Genbank gene 18306 18611 . + . ID=gene-LVR01_01180;Name=LVR01_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01180 JAJSBG010000002.1 Protein Homology CDS 18306 18611 . + 0 ID=cds-MCE2617921.1;Parent=gene-LVR01_01180;Dbxref=NCBI_GP:MCE2617921.1;Name=MCE2617921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809966.1;locus_tag=LVR01_01180;product=DUF1292 domain-containing protein;protein_id=MCE2617921.1;transl_table=11 JAJSBG010000002.1 Genbank gene 18867 20117 . + . ID=gene-LVR01_01185;Name=LVR01_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01185 JAJSBG010000002.1 Protein Homology CDS 18867 20117 . + 0 ID=cds-MCE2617922.1;Parent=gene-LVR01_01185;Dbxref=NCBI_GP:MCE2617922.1;Name=MCE2617922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464354.1;locus_tag=LVR01_01185;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MCE2617922.1;transl_table=11 JAJSBG010000002.1 Genbank pseudogene 20201 20665 . + . ID=gene-LVR01_01190;Name=LVR01_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01190;pseudo=true JAJSBG010000002.1 Protein Homology CDS 20201 20665 . + 0 ID=cds-LVR01_01190;Parent=gene-LVR01_01190;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397219.1;locus_tag=LVR01_01190;product=SP_0198 family lipoprotein;pseudo=true;transl_table=11 JAJSBG010000002.1 Genbank gene 20773 22305 . + . ID=gene-LVR01_01195;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LVR01_01195 JAJSBG010000002.1 Protein Homology CDS 20773 22305 . + 0 ID=cds-MCE2617923.1;Parent=gene-LVR01_01195;Dbxref=NCBI_GP:MCE2617923.1;Name=MCE2617923.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000877342.1;locus_tag=LVR01_01195;product=cardiolipin synthase;protein_id=MCE2617923.1;transl_table=11 JAJSBG010000002.1 Genbank gene 22561 24099 . + . ID=gene-LVR01_01200;Name=LVR01_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01200 JAJSBG010000002.1 Protein Homology CDS 22561 24099 . + 0 ID=cds-MCE2617924.1;Parent=gene-LVR01_01200;Dbxref=NCBI_GP:MCE2617924.1;Name=MCE2617924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844448.1;locus_tag=LVR01_01200;product=damage-inducible protein CinA;protein_id=MCE2617924.1;transl_table=11 JAJSBG010000002.1 Genbank gene 24219 26426 . + . ID=gene-LVR01_01205;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=LVR01_01205 JAJSBG010000002.1 Protein Homology CDS 24219 26426 . + 0 ID=cds-MCE2617925.1;Parent=gene-LVR01_01205;Dbxref=NCBI_GP:MCE2617925.1;Name=MCE2617925.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239081.1;locus_tag=LVR01_01205;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=MCE2617925.1;transl_table=11 JAJSBG010000002.1 Genbank gene 26438 26578 . + . ID=gene-LVR01_01210;Name=LVR01_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01210 JAJSBG010000002.1 Protein Homology CDS 26438 26578 . + 0 ID=cds-MCE2617926.1;Parent=gene-LVR01_01210;Dbxref=NCBI_GP:MCE2617926.1;Name=MCE2617926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521630.1;locus_tag=LVR01_01210;product=hypothetical protein;protein_id=MCE2617926.1;transl_table=11 JAJSBG010000002.1 Genbank gene 26728 27234 . + . ID=gene-LVR01_01215;Name=LVR01_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01215 JAJSBG010000002.1 Protein Homology CDS 26728 27234 . + 0 ID=cds-MCE2617927.1;Parent=gene-LVR01_01215;Dbxref=NCBI_GP:MCE2617927.1;Name=MCE2617927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423398.1;locus_tag=LVR01_01215;product=GNAT family N-acetyltransferase;protein_id=MCE2617927.1;transl_table=11 JAJSBG010000002.1 Genbank gene 27227 27817 . + . ID=gene-LVR01_01220;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=LVR01_01220 JAJSBG010000002.1 Protein Homology CDS 27227 27817 . + 0 ID=cds-MCE2617928.1;Parent=gene-LVR01_01220;Dbxref=NCBI_GP:MCE2617928.1;Name=MCE2617928.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064213.1;locus_tag=LVR01_01220;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=MCE2617928.1;transl_table=11 JAJSBG010000002.1 Genbank gene 27814 28440 . + . ID=gene-LVR01_01225;Name=LVR01_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01225 JAJSBG010000002.1 Protein Homology CDS 27814 28440 . + 0 ID=cds-MCE2617929.1;Parent=gene-LVR01_01225;Dbxref=NCBI_GP:MCE2617929.1;Name=MCE2617929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725996.1;locus_tag=LVR01_01225;product=phosphoribulokinase;protein_id=MCE2617929.1;transl_table=11 JAJSBG010000002.1 Genbank gene 28684 28992 . + . ID=gene-LVR01_01230;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LVR01_01230 JAJSBG010000002.1 Protein Homology CDS 28684 28992 . + 0 ID=cds-MCE2617930.1;Parent=gene-LVR01_01230;Dbxref=NCBI_GP:MCE2617930.1;Name=MCE2617930.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=LVR01_01230;product=30S ribosomal protein S10;protein_id=MCE2617930.1;transl_table=11 JAJSBG010000002.1 Genbank gene 29209 29835 . + . ID=gene-LVR01_01235;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LVR01_01235 JAJSBG010000002.1 Protein Homology CDS 29209 29835 . + 0 ID=cds-MCE2617931.1;Parent=gene-LVR01_01235;Dbxref=NCBI_GP:MCE2617931.1;Name=MCE2617931.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=LVR01_01235;product=50S ribosomal protein L3;protein_id=MCE2617931.1;transl_table=11 JAJSBG010000002.1 Genbank gene 29860 30483 . + . ID=gene-LVR01_01240;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LVR01_01240 JAJSBG010000002.1 Protein Homology CDS 29860 30483 . + 0 ID=cds-MCE2617932.1;Parent=gene-LVR01_01240;Dbxref=NCBI_GP:MCE2617932.1;Name=MCE2617932.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=LVR01_01240;product=50S ribosomal protein L4;protein_id=MCE2617932.1;transl_table=11 JAJSBG010000002.1 Genbank gene 30483 30779 . + . ID=gene-LVR01_01245;Name=LVR01_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01245 JAJSBG010000002.1 Protein Homology CDS 30483 30779 . + 0 ID=cds-MCE2617933.1;Parent=gene-LVR01_01245;Dbxref=NCBI_GP:MCE2617933.1;Name=MCE2617933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=LVR01_01245;product=50S ribosomal protein L23;protein_id=MCE2617933.1;transl_table=11 JAJSBG010000002.1 Genbank gene 30797 31630 . + . ID=gene-LVR01_01250;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LVR01_01250 JAJSBG010000002.1 Protein Homology CDS 30797 31630 . + 0 ID=cds-MCE2617934.1;Parent=gene-LVR01_01250;Dbxref=NCBI_GP:MCE2617934.1;Name=MCE2617934.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=LVR01_01250;product=50S ribosomal protein L2;protein_id=MCE2617934.1;transl_table=11 JAJSBG010000002.1 Genbank gene 31734 32015 . + . ID=gene-LVR01_01255;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LVR01_01255 JAJSBG010000002.1 Protein Homology CDS 31734 32015 . + 0 ID=cds-MCE2617935.1;Parent=gene-LVR01_01255;Dbxref=NCBI_GP:MCE2617935.1;Name=MCE2617935.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533767.1;locus_tag=LVR01_01255;product=30S ribosomal protein S19;protein_id=MCE2617935.1;transl_table=11 JAJSBG010000002.1 Genbank gene 32027 32371 . + . ID=gene-LVR01_01260;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LVR01_01260 JAJSBG010000002.1 Protein Homology CDS 32027 32371 . + 0 ID=cds-MCE2617936.1;Parent=gene-LVR01_01260;Dbxref=NCBI_GP:MCE2617936.1;Name=MCE2617936.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=LVR01_01260;product=50S ribosomal protein L22;protein_id=MCE2617936.1;transl_table=11 JAJSBG010000002.1 Genbank gene 32384 33037 . + . ID=gene-LVR01_01265;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LVR01_01265 JAJSBG010000002.1 Protein Homology CDS 32384 33037 . + 0 ID=cds-MCE2617937.1;Parent=gene-LVR01_01265;Dbxref=NCBI_GP:MCE2617937.1;Name=MCE2617937.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=LVR01_01265;product=30S ribosomal protein S3;protein_id=MCE2617937.1;transl_table=11 JAJSBG010000002.1 Genbank gene 33041 33454 . + . ID=gene-LVR01_01270;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LVR01_01270 JAJSBG010000002.1 Protein Homology CDS 33041 33454 . + 0 ID=cds-MCE2617938.1;Parent=gene-LVR01_01270;Dbxref=NCBI_GP:MCE2617938.1;Name=MCE2617938.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=LVR01_01270;product=50S ribosomal protein L16;protein_id=MCE2617938.1;transl_table=11 JAJSBG010000002.1 Genbank gene 33464 33670 . + . ID=gene-LVR01_01275;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LVR01_01275 JAJSBG010000002.1 Protein Homology CDS 33464 33670 . + 0 ID=cds-MCE2617939.1;Parent=gene-LVR01_01275;Dbxref=NCBI_GP:MCE2617939.1;Name=MCE2617939.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739716.1;locus_tag=LVR01_01275;product=50S ribosomal protein L29;protein_id=MCE2617939.1;transl_table=11 JAJSBG010000002.1 Genbank gene 33695 33955 . + . ID=gene-LVR01_01280;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LVR01_01280 JAJSBG010000002.1 Protein Homology CDS 33695 33955 . + 0 ID=cds-MCE2617940.1;Parent=gene-LVR01_01280;Dbxref=NCBI_GP:MCE2617940.1;Name=MCE2617940.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=LVR01_01280;product=30S ribosomal protein S17;protein_id=MCE2617940.1;transl_table=11 JAJSBG010000002.1 Genbank gene 33981 34349 . + . ID=gene-LVR01_01285;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LVR01_01285 JAJSBG010000002.1 Protein Homology CDS 33981 34349 . + 0 ID=cds-MCE2617941.1;Parent=gene-LVR01_01285;Dbxref=NCBI_GP:MCE2617941.1;Name=MCE2617941.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=LVR01_01285;product=50S ribosomal protein L14;protein_id=MCE2617941.1;transl_table=11 JAJSBG010000002.1 Genbank gene 34532 34837 . + . ID=gene-LVR01_01290;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LVR01_01290 JAJSBG010000002.1 Protein Homology CDS 34532 34837 . + 0 ID=cds-MCE2617942.1;Parent=gene-LVR01_01290;Dbxref=NCBI_GP:MCE2617942.1;Name=MCE2617942.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=LVR01_01290;product=50S ribosomal protein L24;protein_id=MCE2617942.1;transl_table=11 JAJSBG010000002.1 Genbank gene 34861 35403 . + . ID=gene-LVR01_01295;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LVR01_01295 JAJSBG010000002.1 Protein Homology CDS 34861 35403 . + 0 ID=cds-MCE2617943.1;Parent=gene-LVR01_01295;Dbxref=NCBI_GP:MCE2617943.1;Name=MCE2617943.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=LVR01_01295;product=50S ribosomal protein L5;protein_id=MCE2617943.1;transl_table=11 JAJSBG010000002.1 Genbank gene 35421 35690 . + . ID=gene-LVR01_01300;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LVR01_01300 JAJSBG010000002.1 Protein Homology CDS 35421 35690 . + 0 ID=cds-MCE2617944.1;Parent=gene-LVR01_01300;Dbxref=NCBI_GP:MCE2617944.1;Name=MCE2617944.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738440.1;locus_tag=LVR01_01300;product=30S ribosomal protein S14;protein_id=MCE2617944.1;transl_table=11 JAJSBG010000002.1 Genbank gene 35976 36374 . + . ID=gene-LVR01_01305;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LVR01_01305 JAJSBG010000002.1 Protein Homology CDS 35976 36374 . + 0 ID=cds-MCE2617945.1;Parent=gene-LVR01_01305;Dbxref=NCBI_GP:MCE2617945.1;Name=MCE2617945.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=LVR01_01305;product=30S ribosomal protein S8;protein_id=MCE2617945.1;transl_table=11 JAJSBG010000002.1 Genbank gene 36562 37098 . + . ID=gene-LVR01_01310;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LVR01_01310 JAJSBG010000002.1 Protein Homology CDS 36562 37098 . + 0 ID=cds-MCE2617946.1;Parent=gene-LVR01_01310;Dbxref=NCBI_GP:MCE2617946.1;Name=MCE2617946.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=LVR01_01310;product=50S ribosomal protein L6;protein_id=MCE2617946.1;transl_table=11 JAJSBG010000002.1 Genbank gene 37182 37538 . + . ID=gene-LVR01_01315;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LVR01_01315 JAJSBG010000002.1 Protein Homology CDS 37182 37538 . + 0 ID=cds-MCE2617947.1;Parent=gene-LVR01_01315;Dbxref=NCBI_GP:MCE2617947.1;Name=MCE2617947.1;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374469.1;locus_tag=LVR01_01315;product=50S ribosomal protein L18;protein_id=MCE2617947.1;transl_table=11 JAJSBG010000002.1 Genbank gene 37556 38050 . + . ID=gene-LVR01_01320;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LVR01_01320 JAJSBG010000002.1 Protein Homology CDS 37556 38050 . + 0 ID=cds-MCE2617948.1;Parent=gene-LVR01_01320;Dbxref=NCBI_GP:MCE2617948.1;Name=MCE2617948.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=LVR01_01320;product=30S ribosomal protein S5;protein_id=MCE2617948.1;transl_table=11 JAJSBG010000002.1 Genbank gene 38064 38246 . + . ID=gene-LVR01_01325;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LVR01_01325 JAJSBG010000002.1 Protein Homology CDS 38064 38246 . + 0 ID=cds-MCE2617949.1;Parent=gene-LVR01_01325;Dbxref=NCBI_GP:MCE2617949.1;Name=MCE2617949.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377726.1;locus_tag=LVR01_01325;product=50S ribosomal protein L30;protein_id=MCE2617949.1;transl_table=11 JAJSBG010000002.1 Genbank gene 38391 38831 . + . ID=gene-LVR01_01330;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LVR01_01330 JAJSBG010000002.1 Protein Homology CDS 38391 38831 . + 0 ID=cds-MCE2617950.1;Parent=gene-LVR01_01330;Dbxref=NCBI_GP:MCE2617950.1;Name=MCE2617950.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1;locus_tag=LVR01_01330;product=50S ribosomal protein L15;protein_id=MCE2617950.1;transl_table=11 JAJSBG010000002.1 Genbank gene 38844 40154 . + . ID=gene-LVR01_01335;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LVR01_01335 JAJSBG010000002.1 Protein Homology CDS 38844 40154 . + 0 ID=cds-MCE2617951.1;Parent=gene-LVR01_01335;Dbxref=NCBI_GP:MCE2617951.1;Name=MCE2617951.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860634.1;locus_tag=LVR01_01335;product=preprotein translocase subunit SecY;protein_id=MCE2617951.1;transl_table=11 JAJSBG010000002.1 Genbank gene 40420 41058 . + . ID=gene-LVR01_01340;Name=LVR01_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01340 JAJSBG010000002.1 Protein Homology CDS 40420 41058 . + 0 ID=cds-MCE2617952.1;Parent=gene-LVR01_01340;Dbxref=NCBI_GP:MCE2617952.1;Name=MCE2617952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050429.1;locus_tag=LVR01_01340;product=adenylate kinase;protein_id=MCE2617952.1;transl_table=11 JAJSBG010000002.1 Genbank gene 41175 41393 . + . ID=gene-LVR01_01345;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LVR01_01345 JAJSBG010000002.1 Protein Homology CDS 41175 41393 . + 0 ID=cds-MCE2617953.1;Parent=gene-LVR01_01345;Dbxref=NCBI_GP:MCE2617953.1;Name=MCE2617953.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1;locus_tag=LVR01_01345;product=translation initiation factor IF-1;protein_id=MCE2617953.1;transl_table=11 JAJSBG010000002.1 Genbank gene 41418 41534 . + . ID=gene-LVR01_01350;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LVR01_01350 JAJSBG010000002.1 Protein Homology CDS 41418 41534 . + 0 ID=cds-MCE2617954.1;Parent=gene-LVR01_01350;Dbxref=NCBI_GP:MCE2617954.1;Name=MCE2617954.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=LVR01_01350;product=50S ribosomal protein L36;protein_id=MCE2617954.1;transl_table=11 JAJSBG010000002.1 Genbank gene 41552 41917 . + . ID=gene-LVR01_01355;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LVR01_01355 JAJSBG010000002.1 Protein Homology CDS 41552 41917 . + 0 ID=cds-MCE2617955.1;Parent=gene-LVR01_01355;Dbxref=NCBI_GP:MCE2617955.1;Name=MCE2617955.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=LVR01_01355;product=30S ribosomal protein S13;protein_id=MCE2617955.1;transl_table=11 JAJSBG010000002.1 Genbank gene 41935 42318 . + . ID=gene-LVR01_01360;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LVR01_01360 JAJSBG010000002.1 Protein Homology CDS 41935 42318 . + 0 ID=cds-MCE2617956.1;Parent=gene-LVR01_01360;Dbxref=NCBI_GP:MCE2617956.1;Name=MCE2617956.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=LVR01_01360;product=30S ribosomal protein S11;protein_id=MCE2617956.1;transl_table=11 JAJSBG010000002.1 Genbank gene 42361 43296 . + . ID=gene-LVR01_01365;Name=LVR01_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01365 JAJSBG010000002.1 Protein Homology CDS 42361 43296 . + 0 ID=cds-MCE2617957.1;Parent=gene-LVR01_01365;Dbxref=NCBI_GP:MCE2617957.1;Name=MCE2617957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=LVR01_01365;product=DNA-directed RNA polymerase subunit alpha;protein_id=MCE2617957.1;transl_table=11 JAJSBG010000002.1 Genbank gene 43308 43694 . + . ID=gene-LVR01_01370;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LVR01_01370 JAJSBG010000002.1 Protein Homology CDS 43308 43694 . + 0 ID=cds-MCE2617958.1;Parent=gene-LVR01_01370;Dbxref=NCBI_GP:MCE2617958.1;Name=MCE2617958.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=LVR01_01370;product=50S ribosomal protein L17;protein_id=MCE2617958.1;transl_table=11 JAJSBG010000002.1 Genbank gene 43959 44225 . + . ID=gene-LVR01_01375;Name=LVR01_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01375 JAJSBG010000002.1 Protein Homology CDS 43959 44225 . + 0 ID=cds-MCE2617959.1;Parent=gene-LVR01_01375;Dbxref=NCBI_GP:MCE2617959.1;Name=MCE2617959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905356.1;locus_tag=LVR01_01375;product=ACT domain-containing protein;protein_id=MCE2617959.1;transl_table=11 JAJSBG010000002.1 Genbank gene 44235 45572 . + . ID=gene-LVR01_01380;Name=LVR01_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01380 JAJSBG010000002.1 Protein Homology CDS 44235 45572 . + 0 ID=cds-MCE2617960.1;Parent=gene-LVR01_01380;Dbxref=NCBI_GP:MCE2617960.1;Name=MCE2617960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=LVR01_01380;product=PFL family protein;protein_id=MCE2617960.1;transl_table=11 JAJSBG010000002.1 Genbank gene 45590 47056 . + . ID=gene-LVR01_01385;Name=LVR01_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01385 JAJSBG010000002.1 Protein Homology CDS 45590 47056 . + 0 ID=cds-MCE2617961.1;Parent=gene-LVR01_01385;Dbxref=NCBI_GP:MCE2617961.1;Name=MCE2617961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711932.1;locus_tag=LVR01_01385;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2617961.1;transl_table=11 JAJSBG010000002.1 Genbank gene 47289 47981 . + . ID=gene-LVR01_01390;Name=LVR01_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01390 JAJSBG010000002.1 Protein Homology CDS 47289 47981 . + 0 ID=cds-MCE2617962.1;Parent=gene-LVR01_01390;Dbxref=NCBI_GP:MCE2617962.1;Name=MCE2617962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399263.1;locus_tag=LVR01_01390;product=phosphoglycerate mutase family protein;protein_id=MCE2617962.1;transl_table=11 JAJSBG010000002.1 Genbank gene 47978 48169 . - . ID=gene-LVR01_01395;Name=LVR01_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01395 JAJSBG010000002.1 GeneMarkS-2+ CDS 47978 48169 . - 0 ID=cds-MCE2617963.1;Parent=gene-LVR01_01395;Dbxref=NCBI_GP:MCE2617963.1;Name=MCE2617963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_01395;product=hypothetical protein;protein_id=MCE2617963.1;transl_table=11 JAJSBG010000002.1 Genbank gene 48281 49939 . - . ID=gene-LVR01_01400;Name=LVR01_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01400 JAJSBG010000002.1 Protein Homology CDS 48281 49939 . - 0 ID=cds-MCE2617964.1;Parent=gene-LVR01_01400;Dbxref=NCBI_GP:MCE2617964.1;Name=MCE2617964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520796.1;locus_tag=LVR01_01400;product=iron ABC transporter permease;protein_id=MCE2617964.1;transl_table=11 JAJSBG010000002.1 Genbank gene 49929 51020 . - . ID=gene-LVR01_01405;Name=LVR01_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01405 JAJSBG010000002.1 Protein Homology CDS 49929 51020 . - 0 ID=cds-MCE2617965.1;Parent=gene-LVR01_01405;Dbxref=NCBI_GP:MCE2617965.1;Name=MCE2617965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289361.1;locus_tag=LVR01_01405;product=ABC transporter ATP-binding protein;protein_id=MCE2617965.1;transl_table=11 JAJSBG010000002.1 Genbank gene 51033 52079 . - . ID=gene-LVR01_01410;Name=LVR01_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01410 JAJSBG010000002.1 Protein Homology CDS 51033 52079 . - 0 ID=cds-MCE2617966.1;Parent=gene-LVR01_01410;Dbxref=NCBI_GP:MCE2617966.1;Name=MCE2617966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466308.1;locus_tag=LVR01_01410;product=ABC transporter substrate-binding protein;protein_id=MCE2617966.1;transl_table=11 JAJSBG010000002.1 Genbank gene 52191 52964 . - . ID=gene-LVR01_01415;Name=LVR01_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01415 JAJSBG010000002.1 Protein Homology CDS 52191 52964 . - 0 ID=cds-MCE2617967.1;Parent=gene-LVR01_01415;Dbxref=NCBI_GP:MCE2617967.1;Name=MCE2617967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475411.1;locus_tag=LVR01_01415;product=response regulator;protein_id=MCE2617967.1;transl_table=11 JAJSBG010000002.1 Genbank gene 52957 54606 . - . ID=gene-LVR01_01420;Name=LVR01_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01420 JAJSBG010000002.1 Protein Homology CDS 52957 54606 . - 0 ID=cds-MCE2617968.1;Parent=gene-LVR01_01420;Dbxref=NCBI_GP:MCE2617968.1;Name=MCE2617968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019718.1;locus_tag=LVR01_01420;product=histidine kinase;protein_id=MCE2617968.1;transl_table=11 JAJSBG010000002.1 Genbank gene 54754 57255 . + . ID=gene-LVR01_01425;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LVR01_01425 JAJSBG010000002.1 Protein Homology CDS 54754 57255 . + 0 ID=cds-MCE2617969.1;Parent=gene-LVR01_01425;Dbxref=NCBI_GP:MCE2617969.1;Name=MCE2617969.1;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639013.1;locus_tag=LVR01_01425;product=leucine--tRNA ligase;protein_id=MCE2617969.1;transl_table=11 JAJSBG010000002.1 Genbank gene 57297 58139 . + . ID=gene-LVR01_01430;Name=LVR01_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01430 JAJSBG010000002.1 Protein Homology CDS 57297 58139 . + 0 ID=cds-MCE2617970.1;Parent=gene-LVR01_01430;Dbxref=NCBI_GP:MCE2617970.1;Name=MCE2617970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081168.1;locus_tag=LVR01_01430;product=hypothetical protein;protein_id=MCE2617970.1;transl_table=11 JAJSBG010000002.1 Genbank gene 58195 58890 . + . ID=gene-LVR01_01435;Name=LVR01_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01435 JAJSBG010000002.1 Protein Homology CDS 58195 58890 . + 0 ID=cds-MCE2617971.1;Parent=gene-LVR01_01435;Dbxref=NCBI_GP:MCE2617971.1;Name=MCE2617971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144916.1;locus_tag=LVR01_01435;product=GNAT family N-acetyltransferase;protein_id=MCE2617971.1;transl_table=11 JAJSBG010000002.1 Genbank gene 58902 59318 . + . ID=gene-LVR01_01440;Name=LVR01_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01440 JAJSBG010000002.1 Protein Homology CDS 58902 59318 . + 0 ID=cds-MCE2617972.1;Parent=gene-LVR01_01440;Dbxref=NCBI_GP:MCE2617972.1;Name=MCE2617972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862593.1;locus_tag=LVR01_01440;product=GNAT family N-acetyltransferase;protein_id=MCE2617972.1;transl_table=11 JAJSBG010000002.1 Genbank gene 60142 60234 . - . ID=gene-LVR01_01445;Name=LVR01_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01445 JAJSBG010000002.1 Protein Homology CDS 60142 60234 . - 0 ID=cds-MCE2617973.1;Parent=gene-LVR01_01445;Dbxref=NCBI_GP:MCE2617973.1;Name=MCE2617973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269759.1;locus_tag=LVR01_01445;product=type I toxin-antitoxin system Fst family toxin;protein_id=MCE2617973.1;transl_table=11 JAJSBG010000002.1 Genbank pseudogene 60350 60797 . + . ID=gene-LVR01_01450;Name=LVR01_01450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01450;pseudo=true JAJSBG010000002.1 Protein Homology CDS 60350 60797 . + 0 ID=cds-LVR01_01450;Parent=gene-LVR01_01450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_01450;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000002.1 Genbank gene 61026 61394 . + . ID=gene-LVR01_01455;Name=LVR01_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01455 JAJSBG010000002.1 GeneMarkS-2+ CDS 61026 61394 . + 0 ID=cds-MCE2617974.1;Parent=gene-LVR01_01455;Dbxref=NCBI_GP:MCE2617974.1;Name=MCE2617974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_01455;product=hypothetical protein;protein_id=MCE2617974.1;transl_table=11 JAJSBG010000002.1 Genbank gene 61403 61678 . + . ID=gene-LVR01_01460;Name=LVR01_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01460 JAJSBG010000002.1 Protein Homology CDS 61403 61678 . + 0 ID=cds-MCE2617975.1;Parent=gene-LVR01_01460;Dbxref=NCBI_GP:MCE2617975.1;Name=MCE2617975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093431.1;locus_tag=LVR01_01460;product=DUF4352 domain-containing protein;protein_id=MCE2617975.1;transl_table=11 JAJSBG010000002.1 Genbank gene 62274 62366 . - . ID=gene-LVR01_01465;Name=LVR01_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01465 JAJSBG010000002.1 Protein Homology CDS 62274 62366 . - 0 ID=cds-MCE2617976.1;Parent=gene-LVR01_01465;Dbxref=NCBI_GP:MCE2617976.1;Name=MCE2617976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269759.1;locus_tag=LVR01_01465;product=type I toxin-antitoxin system Fst family toxin;protein_id=MCE2617976.1;transl_table=11 JAJSBG010000002.1 Genbank gene 62526 63497 . + . ID=gene-LVR01_01470;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LVR01_01470 JAJSBG010000002.1 Protein Homology CDS 62526 63497 . + 0 ID=cds-MCE2617977.1;Parent=gene-LVR01_01470;Dbxref=NCBI_GP:MCE2617977.1;Name=MCE2617977.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502070.1;locus_tag=LVR01_01470;product=Holliday junction branch migration DNA helicase RuvB;protein_id=MCE2617977.1;transl_table=11 JAJSBG010000002.1 Genbank gene 63478 64050 . + . ID=gene-LVR01_01475;Name=LVR01_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01475 JAJSBG010000002.1 Protein Homology CDS 63478 64050 . + 0 ID=cds-MCE2617978.1;Parent=gene-LVR01_01475;Dbxref=NCBI_GP:MCE2617978.1;Name=MCE2617978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098890.1;locus_tag=LVR01_01475;product=nucleotidyltransferase family protein;protein_id=MCE2617978.1;transl_table=11 JAJSBG010000002.1 Genbank gene 64396 65154 . + . ID=gene-LVR01_01480;Name=LVR01_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01480 JAJSBG010000002.1 Protein Homology CDS 64396 65154 . + 0 ID=cds-MCE2617979.1;Parent=gene-LVR01_01480;Dbxref=NCBI_GP:MCE2617979.1;Name=MCE2617979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466694.1;locus_tag=LVR01_01480;product=isoprenyl transferase;protein_id=MCE2617979.1;transl_table=11 JAJSBG010000002.1 Genbank gene 65163 65966 . + . ID=gene-LVR01_01485;Name=LVR01_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01485 JAJSBG010000002.1 Protein Homology CDS 65163 65966 . + 0 ID=cds-MCE2617980.1;Parent=gene-LVR01_01485;Dbxref=NCBI_GP:MCE2617980.1;Name=MCE2617980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189872.1;locus_tag=LVR01_01485;product=phosphatidate cytidylyltransferase;protein_id=MCE2617980.1;transl_table=11 JAJSBG010000002.1 Genbank gene 65988 67247 . + . ID=gene-LVR01_01490;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LVR01_01490 JAJSBG010000002.1 Protein Homology CDS 65988 67247 . + 0 ID=cds-MCE2617981.1;Parent=gene-LVR01_01490;Dbxref=NCBI_GP:MCE2617981.1;Name=MCE2617981.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900658.1;locus_tag=LVR01_01490;product=RIP metalloprotease RseP;protein_id=MCE2617981.1;transl_table=11 JAJSBG010000002.1 Genbank gene 67260 69113 . + . ID=gene-LVR01_01495;Name=LVR01_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01495 JAJSBG010000002.1 Protein Homology CDS 67260 69113 . + 0 ID=cds-MCE2617982.1;Parent=gene-LVR01_01495;Dbxref=NCBI_GP:MCE2617982.1;Name=MCE2617982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814078.1;locus_tag=LVR01_01495;product=proline--tRNA ligase;protein_id=MCE2617982.1;transl_table=11 JAJSBG010000002.1 Genbank gene 69212 70591 . + . ID=gene-LVR01_01500;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=LVR01_01500 JAJSBG010000002.1 Protein Homology CDS 69212 70591 . + 0 ID=cds-MCE2617983.1;Parent=gene-LVR01_01500;Dbxref=NCBI_GP:MCE2617983.1;Name=MCE2617983.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000943526.1;locus_tag=LVR01_01500;product=6-phospho-beta-glucosidase;protein_id=MCE2617983.1;transl_table=11 JAJSBG010000002.1 Genbank gene 70783 72591 . + . ID=gene-LVR01_01505;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LVR01_01505 JAJSBG010000002.1 Protein Homology CDS 70783 72591 . + 0 ID=cds-MCE2617984.1;Parent=gene-LVR01_01505;Dbxref=NCBI_GP:MCE2617984.1;Name=MCE2617984.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621492.1;locus_tag=LVR01_01505;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=MCE2617984.1;transl_table=11 JAJSBG010000002.1 Genbank gene 73036 74805 . + . ID=gene-LVR01_01510;Name=LVR01_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01510 JAJSBG010000002.1 Protein Homology CDS 73036 74805 . + 0 ID=cds-MCE2617985.1;Parent=gene-LVR01_01510;Dbxref=NCBI_GP:MCE2617985.1;Name=MCE2617985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391672.1;locus_tag=LVR01_01510;product=PTS mannitol-specific transporter subunit IIBC;protein_id=MCE2617985.1;transl_table=11 JAJSBG010000002.1 Genbank gene 74829 76784 . + . ID=gene-LVR01_01515;Name=LVR01_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01515 JAJSBG010000002.1 Protein Homology CDS 74829 76784 . + 0 ID=cds-MCE2617986.1;Parent=gene-LVR01_01515;Dbxref=NCBI_GP:MCE2617986.1;Name=MCE2617986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866831.1;locus_tag=LVR01_01515;product=transcription antiterminator;protein_id=MCE2617986.1;transl_table=11 JAJSBG010000002.1 Genbank gene 76786 77223 . + . ID=gene-LVR01_01520;Name=LVR01_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01520 JAJSBG010000002.1 Protein Homology CDS 76786 77223 . + 0 ID=cds-MCE2617987.1;Parent=gene-LVR01_01520;Dbxref=NCBI_GP:MCE2617987.1;Name=MCE2617987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397206.1;locus_tag=LVR01_01520;product=PTS sugar transporter subunit IIA;protein_id=MCE2617987.1;transl_table=11 JAJSBG010000002.1 Genbank gene 77285 78421 . + . ID=gene-LVR01_01525;Name=LVR01_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01525 JAJSBG010000002.1 Protein Homology CDS 77285 78421 . + 0 ID=cds-MCE2617988.1;Parent=gene-LVR01_01525;Dbxref=NCBI_GP:MCE2617988.1;Name=MCE2617988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682970.1;locus_tag=LVR01_01525;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=MCE2617988.1;transl_table=11 JAJSBG010000002.1 Genbank gene 78450 78572 . - . ID=gene-LVR01_01530;Name=LVR01_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01530 JAJSBG010000002.1 Protein Homology CDS 78450 78572 . - 0 ID=cds-MCE2617989.1;Parent=gene-LVR01_01530;Dbxref=NCBI_GP:MCE2617989.1;Name=MCE2617989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_01530;product=chlorohydrolase;protein_id=MCE2617989.1;transl_table=11 JAJSBG010000002.1 Genbank pseudogene 78628 79677 . + . ID=gene-LVR01_01535;Name=LVR01_01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01535;pseudo=true JAJSBG010000002.1 Protein Homology CDS 78628 79677 . + 0 ID=cds-LVR01_01535;Parent=gene-LVR01_01535;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229779.1;locus_tag=LVR01_01535;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 JAJSBG010000002.1 Genbank gene 79895 80902 . + . ID=gene-LVR01_01540;Name=LVR01_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01540 JAJSBG010000002.1 Protein Homology CDS 79895 80902 . + 0 ID=cds-MCE2617990.1;Parent=gene-LVR01_01540;Dbxref=NCBI_GP:MCE2617990.1;Name=MCE2617990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202170.1;locus_tag=LVR01_01540;product=uroporphyrinogen decarboxylase;protein_id=MCE2617990.1;transl_table=11 JAJSBG010000002.1 Genbank gene 80912 81115 . + . ID=gene-LVR01_01545;Name=LVR01_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01545 JAJSBG010000002.1 Protein Homology CDS 80912 81115 . + 0 ID=cds-MCE2617991.1;Parent=gene-LVR01_01545;Dbxref=NCBI_GP:MCE2617991.1;Name=MCE2617991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823549.1;locus_tag=LVR01_01545;product=hypothetical protein;protein_id=MCE2617991.1;transl_table=11 JAJSBG010000002.1 Genbank gene 81118 82116 . + . ID=gene-LVR01_01550;Name=LVR01_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01550 JAJSBG010000002.1 Protein Homology CDS 81118 82116 . + 0 ID=cds-MCE2617992.1;Parent=gene-LVR01_01550;Dbxref=NCBI_GP:MCE2617992.1;Name=MCE2617992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016091.1;locus_tag=LVR01_01550;product=uroporphyrinogen decarboxylase family protein;protein_id=MCE2617992.1;transl_table=11 JAJSBG010000002.1 Genbank gene 82128 83006 . + . ID=gene-LVR01_01555;Name=LVR01_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01555 JAJSBG010000002.1 Protein Homology CDS 82128 83006 . + 0 ID=cds-MCE2617993.1;Parent=gene-LVR01_01555;Dbxref=NCBI_GP:MCE2617993.1;Name=MCE2617993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899086.1;locus_tag=LVR01_01555;product=transporter substrate-binding domain-containing protein;protein_id=MCE2617993.1;transl_table=11 JAJSBG010000002.1 Genbank gene 83184 83876 . + . ID=gene-LVR01_01560;Name=LVR01_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01560 JAJSBG010000002.1 Protein Homology CDS 83184 83876 . + 0 ID=cds-MCE2617994.1;Parent=gene-LVR01_01560;Dbxref=NCBI_GP:MCE2617994.1;Name=MCE2617994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255459.1;locus_tag=LVR01_01560;product=amino acid ABC transporter permease;protein_id=MCE2617994.1;transl_table=11 JAJSBG010000002.1 Genbank gene 83880 84602 . + . ID=gene-LVR01_01565;Name=LVR01_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01565 JAJSBG010000002.1 Protein Homology CDS 83880 84602 . + 0 ID=cds-MCE2617995.1;Parent=gene-LVR01_01565;Dbxref=NCBI_GP:MCE2617995.1;Name=MCE2617995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362517.1;locus_tag=LVR01_01565;product=amino acid ABC transporter permease;protein_id=MCE2617995.1;transl_table=11 JAJSBG010000002.1 Genbank gene 84612 85376 . + . ID=gene-LVR01_01570;Name=LVR01_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01570 JAJSBG010000002.1 Protein Homology CDS 84612 85376 . + 0 ID=cds-MCE2617996.1;Parent=gene-LVR01_01570;Dbxref=NCBI_GP:MCE2617996.1;Name=MCE2617996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595036.1;locus_tag=LVR01_01570;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2617996.1;transl_table=11 JAJSBG010000002.1 Genbank gene 85452 89312 . - . ID=gene-LVR01_01575;Name=spuA;gbkey=Gene;gene=spuA;gene_biotype=protein_coding;locus_tag=LVR01_01575 JAJSBG010000002.1 Protein Homology CDS 85452 89312 . - 0 ID=cds-MCE2617997.1;Parent=gene-LVR01_01575;Dbxref=NCBI_GP:MCE2617997.1;Name=MCE2617997.1;gbkey=CDS;gene=spuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860626.1;locus_tag=LVR01_01575;product=LPXTG-anchored pullulanase SpuA;protein_id=MCE2617997.1;transl_table=11 JAJSBG010000002.1 Genbank gene 89881 91878 . + . ID=gene-LVR01_01580;Name=LVR01_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01580 JAJSBG010000002.1 Protein Homology CDS 89881 91878 . + 0 ID=cds-MCE2617998.1;Parent=gene-LVR01_01580;Dbxref=NCBI_GP:MCE2617998.1;Name=MCE2617998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071074.1;locus_tag=LVR01_01580;product=thiol-activated cytolysin family protein;protein_id=MCE2617998.1;transl_table=11 JAJSBG010000002.1 Genbank pseudogene 92152 92298 . - . ID=gene-LVR01_01585;Name=LVR01_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01585;pseudo=true JAJSBG010000002.1 Protein Homology CDS 92152 92298 . - 0 ID=cds-LVR01_01585;Parent=gene-LVR01_01585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163009.1;locus_tag=LVR01_01585;product=IS30 family transposase;pseudo=true;transl_table=11 JAJSBG010000002.1 Genbank gene 92589 93002 . + . ID=gene-LVR01_01590;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LVR01_01590 JAJSBG010000002.1 Protein Homology CDS 92589 93002 . + 0 ID=cds-MCE2617999.1;Parent=gene-LVR01_01590;Dbxref=NCBI_GP:MCE2617999.1;Name=MCE2617999.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=LVR01_01590;product=30S ribosomal protein S12;protein_id=MCE2617999.1;transl_table=11 JAJSBG010000002.1 Genbank gene 93022 93492 . + . ID=gene-LVR01_01595;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LVR01_01595 JAJSBG010000002.1 Protein Homology CDS 93022 93492 . + 0 ID=cds-MCE2618000.1;Parent=gene-LVR01_01595;Dbxref=NCBI_GP:MCE2618000.1;Name=MCE2618000.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=LVR01_01595;product=30S ribosomal protein S7;protein_id=MCE2618000.1;transl_table=11 JAJSBG010000002.1 Genbank gene 93771 95852 . + . ID=gene-LVR01_01600;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LVR01_01600 JAJSBG010000002.1 Protein Homology CDS 93771 95852 . + 0 ID=cds-MCE2618001.1;Parent=gene-LVR01_01600;Dbxref=NCBI_GP:MCE2618001.1;Name=MCE2618001.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397201.1;locus_tag=LVR01_01600;product=elongation factor G;protein_id=MCE2618001.1;transl_table=11 JAJSBG010000002.1 Genbank gene 95956 100347 . + . ID=gene-LVR01_01605;Name=LVR01_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01605 JAJSBG010000002.1 Protein Homology CDS 95956 100347 . + 0 ID=cds-MCE2618002.1;Parent=gene-LVR01_01605;Dbxref=NCBI_GP:MCE2618002.1;Name=MCE2618002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071418.1;locus_tag=LVR01_01605;product=PolC-type DNA polymerase III;protein_id=MCE2618002.1;transl_table=11 JAJSBG010000002.1 Genbank gene 100385 101062 . + . ID=gene-LVR01_01610;Name=LVR01_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01610 JAJSBG010000002.1 Protein Homology CDS 100385 101062 . + 0 ID=cds-MCE2618003.1;Parent=gene-LVR01_01610;Dbxref=NCBI_GP:MCE2618003.1;Name=MCE2618003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970259.1;locus_tag=LVR01_01610;product=hypothetical protein;protein_id=MCE2618003.1;transl_table=11 JAJSBG010000002.1 Genbank gene 101076 101228 . + . ID=gene-LVR01_01615;Name=LVR01_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01615 JAJSBG010000002.1 Protein Homology CDS 101076 101228 . + 0 ID=cds-MCE2618004.1;Parent=gene-LVR01_01615;Dbxref=NCBI_GP:MCE2618004.1;Name=MCE2618004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776615.1;locus_tag=LVR01_01615;product=hypothetical protein;protein_id=MCE2618004.1;transl_table=11 JAJSBG010000002.1 Genbank gene 101250 102491 . + . ID=gene-LVR01_01620;Name=LVR01_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01620 JAJSBG010000002.1 Protein Homology CDS 101250 102491 . + 0 ID=cds-MCE2618005.1;Parent=gene-LVR01_01620;Dbxref=NCBI_GP:MCE2618005.1;Name=MCE2618005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243957.1;locus_tag=LVR01_01620;product=aminopeptidase;protein_id=MCE2618005.1;transl_table=11 JAJSBG010000002.1 Genbank gene 102501 102731 . + . ID=gene-LVR01_01625;Name=LVR01_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01625 JAJSBG010000002.1 Protein Homology CDS 102501 102731 . + 0 ID=cds-MCE2618006.1;Parent=gene-LVR01_01625;Dbxref=NCBI_GP:MCE2618006.1;Name=MCE2618006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000901571.1;locus_tag=LVR01_01625;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MCE2618006.1;transl_table=11 JAJSBG010000002.1 Genbank gene 102752 102955 . + . ID=gene-LVR01_01630;Name=LVR01_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01630 JAJSBG010000002.1 GeneMarkS-2+ CDS 102752 102955 . + 0 ID=cds-MCE2618007.1;Parent=gene-LVR01_01630;Dbxref=NCBI_GP:MCE2618007.1;Name=MCE2618007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_01630;product=hypothetical protein;protein_id=MCE2618007.1;transl_table=11 JAJSBG010000002.1 Genbank gene 103045 103767 . + . ID=gene-LVR01_01635;Name=LVR01_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01635 JAJSBG010000002.1 Protein Homology CDS 103045 103767 . + 0 ID=cds-MCE2618008.1;Parent=gene-LVR01_01635;Dbxref=NCBI_GP:MCE2618008.1;Name=MCE2618008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519582.1;locus_tag=LVR01_01635;product=rRNA pseudouridine synthase;protein_id=MCE2618008.1;transl_table=11 JAJSBG010000002.1 Genbank gene 103878 105212 . + . ID=gene-LVR01_01640;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=LVR01_01640 JAJSBG010000002.1 Protein Homology CDS 103878 105212 . + 0 ID=cds-MCE2618009.1;Parent=gene-LVR01_01640;Dbxref=NCBI_GP:MCE2618009.1;Name=MCE2618009.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991632.1;locus_tag=LVR01_01640;product=aminopeptidase C;protein_id=MCE2618009.1;transl_table=11 JAJSBG010000002.1 Genbank gene 105268 106179 . - . ID=gene-LVR01_01645;Name=LVR01_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01645 JAJSBG010000002.1 Protein Homology CDS 105268 106179 . - 0 ID=cds-MCE2618010.1;Parent=gene-LVR01_01645;Dbxref=NCBI_GP:MCE2618010.1;Name=MCE2618010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136863.1;locus_tag=LVR01_01645;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MCE2618010.1;transl_table=11 JAJSBG010000002.1 Genbank gene 106203 107006 . - . ID=gene-LVR01_01650;Name=LVR01_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01650 JAJSBG010000002.1 Protein Homology CDS 106203 107006 . - 0 ID=cds-MCE2618011.1;Parent=gene-LVR01_01650;Dbxref=NCBI_GP:MCE2618011.1;Name=MCE2618011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022712.1;locus_tag=LVR01_01650;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=MCE2618011.1;transl_table=11 JAJSBG010000002.1 Genbank gene 107034 108023 . - . ID=gene-LVR01_01655;Name=LVR01_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01655 JAJSBG010000002.1 Protein Homology CDS 107034 108023 . - 0 ID=cds-MCE2618012.1;Parent=gene-LVR01_01655;Dbxref=NCBI_GP:MCE2618012.1;Name=MCE2618012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021981.1;locus_tag=LVR01_01655;product=PTS sugar transporter subunit IIB;protein_id=MCE2618012.1;transl_table=11 JAJSBG010000002.1 Genbank gene 108259 109278 . - . ID=gene-LVR01_01660;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LVR01_01660 JAJSBG010000002.1 Protein Homology CDS 108259 109278 . - 0 ID=cds-MCE2618013.1;Parent=gene-LVR01_01660;Dbxref=NCBI_GP:MCE2618013.1;Name=MCE2618013.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649145.1;locus_tag=LVR01_01660;product=alcohol dehydrogenase AdhP;protein_id=MCE2618013.1;transl_table=11 JAJSBG010000002.1 Genbank gene 109482 109900 . + . ID=gene-LVR01_01665;Name=LVR01_01665;end_range=109900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01665;partial=true JAJSBG010000002.1 Protein Homology CDS 109482 109900 . + 0 ID=cds-MCE2618014.1;Parent=gene-LVR01_01665;Dbxref=NCBI_GP:MCE2618014.1;Name=MCE2618014.1;end_range=109900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_01665;partial=true;product=winged helix-turn-helix domain-containing protein;protein_id=MCE2618014.1;transl_table=11 ##sequence-region JAJSBG010000030.1 1 21310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000030.1 Genbank region 1 21310 . + . ID=JAJSBG010000030.1:1..21310;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000030.1 Genbank gene 134 1684 . - . ID=gene-LVR01_08020;Name=LVR01_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08020 JAJSBG010000030.1 Protein Homology CDS 134 1684 . - 0 ID=cds-MCE2619174.1;Parent=gene-LVR01_08020;Dbxref=NCBI_GP:MCE2619174.1;Name=MCE2619174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392528.1;locus_tag=LVR01_08020;product=chloride channel protein;protein_id=MCE2619174.1;transl_table=11 JAJSBG010000030.1 Genbank gene 1700 2479 . - . ID=gene-LVR01_08025;Name=LVR01_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08025 JAJSBG010000030.1 Protein Homology CDS 1700 2479 . - 0 ID=cds-MCE2619175.1;Parent=gene-LVR01_08025;Dbxref=NCBI_GP:MCE2619175.1;Name=MCE2619175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201102.1;locus_tag=LVR01_08025;product=ribonuclease HII;protein_id=MCE2619175.1;transl_table=11 JAJSBG010000030.1 Genbank gene 2466 3317 . - . ID=gene-LVR01_08030;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=LVR01_08030 JAJSBG010000030.1 Protein Homology CDS 2466 3317 . - 0 ID=cds-MCE2619176.1;Parent=gene-LVR01_08030;Dbxref=NCBI_GP:MCE2619176.1;Name=MCE2619176.1;gbkey=CDS;gene=ylqF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201313.1;locus_tag=LVR01_08030;product=ribosome biogenesis GTPase YlqF;protein_id=MCE2619176.1;transl_table=11 JAJSBG010000030.1 Genbank pseudogene 3744 4037 . + . ID=gene-LVR01_08035;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=LVR01_08035;pseudo=true JAJSBG010000030.1 Protein Homology CDS 3744 4037 . + 0 ID=cds-LVR01_08035;Parent=gene-LVR01_08035;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B internal stop;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=LVR01_08035;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 JAJSBG010000030.1 Genbank pseudogene 4031 4367 . + . ID=gene-LVR01_08040;Name=LVR01_08040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08040;pseudo=true JAJSBG010000030.1 Protein Homology CDS 4031 4367 . + 0 ID=cds-LVR01_08040;Parent=gene-LVR01_08040;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010921814.1;locus_tag=LVR01_08040;product=transposase domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000030.1 Genbank gene 4577 8927 . - . ID=gene-LVR01_08045;Name=LVR01_08045;end_range=8927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08045;partial=true JAJSBG010000030.1 Protein Homology CDS 4577 8927 . - 1 ID=cds-MCE2619177.1;Parent=gene-LVR01_08045;Dbxref=NCBI_GP:MCE2619177.1;Name=MCE2619177.1;end_range=8927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417171.1;locus_tag=LVR01_08045;partial=true;product=peptidase;protein_id=MCE2619177.1;transl_table=11 JAJSBG010000030.1 Genbank gene 9028 11162 . - . ID=gene-LVR01_08050;Name=LVR01_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08050;partial=true;start_range=.,9028 JAJSBG010000030.1 Protein Homology CDS 9028 11162 . - 0 ID=cds-MCE2619178.1;Parent=gene-LVR01_08050;Dbxref=NCBI_GP:MCE2619178.1;Name=MCE2619178.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417152.1;locus_tag=LVR01_08050;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2619178.1;start_range=.,9028;transl_table=11 JAJSBG010000030.1 Genbank pseudogene 11401 12580 . - . ID=gene-LVR01_08055;Name=LVR01_08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08055;pseudo=true JAJSBG010000030.1 Protein Homology CDS 11401 12580 . - 0 ID=cds-LVR01_08055;Parent=gene-LVR01_08055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398605.1;locus_tag=LVR01_08055;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000030.1 Genbank gene 12603 12878 . + . ID=gene-LVR01_08060;Name=LVR01_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08060 JAJSBG010000030.1 GeneMarkS-2+ CDS 12603 12878 . + 0 ID=cds-MCE2619179.1;Parent=gene-LVR01_08060;Dbxref=NCBI_GP:MCE2619179.1;Name=MCE2619179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08060;product=hypothetical protein;protein_id=MCE2619179.1;transl_table=11 JAJSBG010000030.1 Genbank gene 12840 16490 . - . ID=gene-LVR01_08065;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=LVR01_08065 JAJSBG010000030.1 Protein Homology CDS 12840 16490 . - 0 ID=cds-MCE2619180.1;Parent=gene-LVR01_08065;Dbxref=NCBI_GP:MCE2619180.1;Name=MCE2619180.1;gbkey=CDS;gene=addA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767270.1;locus_tag=LVR01_08065;product=helicase-exonuclease AddAB subunit AddA;protein_id=MCE2619180.1;transl_table=11 JAJSBG010000030.1 Genbank gene 16487 19762 . - . ID=gene-LVR01_08070;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=LVR01_08070 JAJSBG010000030.1 Protein Homology CDS 16487 19762 . - 0 ID=cds-MCE2619181.1;Parent=gene-LVR01_08070;Dbxref=NCBI_GP:MCE2619181.1;Name=MCE2619181.1;gbkey=CDS;gene=rexB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002206154.1;locus_tag=LVR01_08070;product=ATP-dependent nuclease subunit B;protein_id=MCE2619181.1;transl_table=11 JAJSBG010000030.1 Genbank pseudogene 19960 20115 . - . ID=gene-LVR01_08075;Name=LVR01_08075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08075;pseudo=true JAJSBG010000030.1 Protein Homology CDS 19960 20115 . - 0 ID=cds-LVR01_08075;Parent=gene-LVR01_08075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006702463.1;locus_tag=LVR01_08075;product=diacylglycerol kinase family lipid kinase;pseudo=true;transl_table=11 JAJSBG010000030.1 Genbank gene 20221 20580 . + . ID=gene-LVR01_08080;Name=LVR01_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08080 JAJSBG010000030.1 Protein Homology CDS 20221 20580 . + 0 ID=cds-MCE2619182.1;Parent=gene-LVR01_08080;Dbxref=NCBI_GP:MCE2619182.1;Name=MCE2619182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235657.1;locus_tag=LVR01_08080;product=tyrosine-type recombinase/integrase;protein_id=MCE2619182.1;transl_table=11 JAJSBG010000030.1 Genbank pseudogene 20664 21310 . - . ID=gene-LVR01_08085;Name=LVR01_08085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08085;pseudo=true JAJSBG010000030.1 Protein Homology CDS 20664 21310 . - 0 ID=cds-LVR01_08085;Parent=gene-LVR01_08085;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040325.1;locus_tag=LVR01_08085;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000031.1 1 21179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000031.1 Genbank region 1 21179 . + . ID=JAJSBG010000031.1:1..21179;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000031.1 Genbank gene 276 1562 . + . ID=gene-LVR01_08090;Name=LVR01_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08090 JAJSBG010000031.1 Protein Homology CDS 276 1562 . + 0 ID=cds-MCE2619183.1;Parent=gene-LVR01_08090;Dbxref=NCBI_GP:MCE2619183.1;Name=MCE2619183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000169115.1;locus_tag=LVR01_08090;product=U32 family peptidase;protein_id=MCE2619183.1;transl_table=11 JAJSBG010000031.1 Genbank gene 1945 2790 . + . ID=gene-LVR01_08095;Name=LVR01_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08095 JAJSBG010000031.1 Protein Homology CDS 1945 2790 . + 0 ID=cds-MCE2619184.1;Parent=gene-LVR01_08095;Dbxref=NCBI_GP:MCE2619184.1;Name=MCE2619184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452046.1;locus_tag=LVR01_08095;product=ABC transporter ATP-binding protein;protein_id=MCE2619184.1;transl_table=11 JAJSBG010000031.1 Genbank gene 2806 3534 . + . ID=gene-LVR01_08100;Name=LVR01_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08100 JAJSBG010000031.1 Protein Homology CDS 2806 3534 . + 0 ID=cds-MCE2619185.1;Parent=gene-LVR01_08100;Dbxref=NCBI_GP:MCE2619185.1;Name=MCE2619185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773447.1;locus_tag=LVR01_08100;product=ABC transporter permease;protein_id=MCE2619185.1;transl_table=11 JAJSBG010000031.1 Genbank gene 3920 4129 . + . ID=gene-LVR01_08105;Name=LVR01_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08105 JAJSBG010000031.1 Protein Homology CDS 3920 4129 . + 0 ID=cds-MCE2619186.1;Parent=gene-LVR01_08105;Dbxref=NCBI_GP:MCE2619186.1;Name=MCE2619186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670190.1;locus_tag=LVR01_08105;product=helix-turn-helix transcriptional regulator;protein_id=MCE2619186.1;transl_table=11 JAJSBG010000031.1 Genbank gene 4119 4607 . + . ID=gene-LVR01_08110;Name=LVR01_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08110 JAJSBG010000031.1 Protein Homology CDS 4119 4607 . + 0 ID=cds-MCE2619187.1;Parent=gene-LVR01_08110;Dbxref=NCBI_GP:MCE2619187.1;Name=MCE2619187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797183.1;locus_tag=LVR01_08110;product=hypothetical protein;protein_id=MCE2619187.1;transl_table=11 JAJSBG010000031.1 Genbank gene 4723 6183 . + . ID=gene-LVR01_08115;Name=LVR01_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08115 JAJSBG010000031.1 Protein Homology CDS 4723 6183 . + 0 ID=cds-MCE2619188.1;Parent=gene-LVR01_08115;Dbxref=NCBI_GP:MCE2619188.1;Name=MCE2619188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466109.1;locus_tag=LVR01_08115;product=nicotinate phosphoribosyltransferase;protein_id=MCE2619188.1;transl_table=11 JAJSBG010000031.1 Genbank gene 6180 7004 . + . ID=gene-LVR01_08120;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LVR01_08120 JAJSBG010000031.1 Protein Homology CDS 6180 7004 . + 0 ID=cds-MCE2619189.1;Parent=gene-LVR01_08120;Dbxref=NCBI_GP:MCE2619189.1;Name=MCE2619189.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058066.1;locus_tag=LVR01_08120;product=ammonia-dependent NAD(+) synthetase;protein_id=MCE2619189.1;transl_table=11 JAJSBG010000031.1 Genbank gene 7354 7905 . + . ID=gene-LVR01_08125;Name=LVR01_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08125 JAJSBG010000031.1 Protein Homology CDS 7354 7905 . + 0 ID=cds-MCE2619190.1;Parent=gene-LVR01_08125;Dbxref=NCBI_GP:MCE2619190.1;Name=MCE2619190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835652.1;locus_tag=LVR01_08125;product=GNAT family N-acetyltransferase;protein_id=MCE2619190.1;transl_table=11 JAJSBG010000031.1 Genbank pseudogene 8745 9061 . + . ID=gene-LVR01_08130;Name=LVR01_08130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08130;pseudo=true JAJSBG010000031.1 Protein Homology CDS 8745 9061 . + 0 ID=cds-LVR01_08130;Parent=gene-LVR01_08130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_08130;product=G5 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000031.1 Genbank gene 9162 9715 . + . ID=gene-LVR01_08135;Name=LVR01_08135;end_range=9715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08135;partial=true;start_range=.,9162 JAJSBG010000031.1 Protein Homology CDS 9162 9715 . + 1 ID=cds-MCE2619191.1;Parent=gene-LVR01_08135;Dbxref=NCBI_GP:MCE2619191.1;Name=MCE2619191.1;end_range=9715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_08135;partial=true;product=G5 domain-containing protein;protein_id=MCE2619191.1;start_range=.,9162;transl_table=11 JAJSBG010000031.1 Genbank gene 9816 11002 . + . ID=gene-LVR01_08140;Name=LVR01_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08140;partial=true;start_range=.,9816 JAJSBG010000031.1 Protein Homology CDS 9816 11002 . + 2 ID=cds-MCE2619192.1;Parent=gene-LVR01_08140;Dbxref=NCBI_GP:MCE2619192.1;Name=MCE2619192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_08140;partial=true;product=PspC-related protein choline-binding protein 1;protein_id=MCE2619192.1;start_range=.,9816;transl_table=11 JAJSBG010000031.1 Genbank gene 11510 12538 . - . ID=gene-LVR01_08145;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LVR01_08145 JAJSBG010000031.1 Protein Homology CDS 11510 12538 . - 0 ID=cds-MCE2619193.1;Parent=gene-LVR01_08145;Dbxref=NCBI_GP:MCE2619193.1;Name=MCE2619193.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014931869.1;locus_tag=LVR01_08145;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=MCE2619193.1;transl_table=11 JAJSBG010000031.1 Genbank gene 12689 13396 . + . ID=gene-LVR01_08150;Name=LVR01_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08150 JAJSBG010000031.1 Protein Homology CDS 12689 13396 . + 0 ID=cds-MCE2619194.1;Parent=gene-LVR01_08150;Dbxref=NCBI_GP:MCE2619194.1;Name=MCE2619194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269928.1;locus_tag=LVR01_08150;product=glucosamine-6-phosphate deaminase;protein_id=MCE2619194.1;transl_table=11 JAJSBG010000031.1 Genbank gene 13535 13711 . + . ID=gene-LVR01_08155;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LVR01_08155 JAJSBG010000031.1 Protein Homology CDS 13535 13711 . + 0 ID=cds-MCE2619195.1;Parent=gene-LVR01_08155;Dbxref=NCBI_GP:MCE2619195.1;Name=MCE2619195.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860052.1;locus_tag=LVR01_08155;product=30S ribosomal protein S21;protein_id=MCE2619195.1;transl_table=11 JAJSBG010000031.1 Genbank gene 13751 13942 . - . ID=gene-LVR01_08160;Name=LVR01_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08160 JAJSBG010000031.1 GeneMarkS-2+ CDS 13751 13942 . - 0 ID=cds-MCE2619196.1;Parent=gene-LVR01_08160;Dbxref=NCBI_GP:MCE2619196.1;Name=MCE2619196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08160;product=hypothetical protein;protein_id=MCE2619196.1;transl_table=11 JAJSBG010000031.1 Genbank gene 14039 14974 . + . ID=gene-LVR01_08165;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LVR01_08165 JAJSBG010000031.1 Protein Homology CDS 14039 14974 . + 0 ID=cds-MCE2619197.1;Parent=gene-LVR01_08165;Dbxref=NCBI_GP:MCE2619197.1;Name=MCE2619197.1;gbkey=CDS;gene=hprK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399387.1;locus_tag=LVR01_08165;product=HPr(Ser) kinase/phosphatase;protein_id=MCE2619197.1;transl_table=11 JAJSBG010000031.1 Genbank gene 14967 15755 . + . ID=gene-LVR01_08170;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LVR01_08170 JAJSBG010000031.1 Protein Homology CDS 14967 15755 . + 0 ID=cds-MCE2619198.1;Parent=gene-LVR01_08170;Dbxref=NCBI_GP:MCE2619198.1;Name=MCE2619198.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886660.1;locus_tag=LVR01_08170;product=prolipoprotein diacylglyceryl transferase;protein_id=MCE2619198.1;transl_table=11 JAJSBG010000031.1 Genbank pseudogene 15756 16182 . + . ID=gene-LVR01_08175;Name=LVR01_08175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08175;pseudo=true JAJSBG010000031.1 Protein Homology CDS 15756 16182 . + 0 ID=cds-LVR01_08175;Parent=gene-LVR01_08175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895042.1;locus_tag=LVR01_08175;product=DUF948 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000031.1 Genbank gene 16155 16550 . + . ID=gene-LVR01_08180;Name=LVR01_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08180 JAJSBG010000031.1 Protein Homology CDS 16155 16550 . + 0 ID=cds-MCE2619199.1;Parent=gene-LVR01_08180;Dbxref=NCBI_GP:MCE2619199.1;Name=MCE2619199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517366.1;locus_tag=LVR01_08180;product=YtxH domain-containing protein;protein_id=MCE2619199.1;transl_table=11 JAJSBG010000031.1 Genbank gene 16909 21006 . + . ID=gene-LVR01_08185;Name=LVR01_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08185 JAJSBG010000031.1 Protein Homology CDS 16909 21006 . + 0 ID=cds-MCE2619200.1;Parent=gene-LVR01_08185;Dbxref=NCBI_GP:MCE2619200.1;Name=MCE2619200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651637.1;locus_tag=LVR01_08185;product=G5 domain-containing protein;protein_id=MCE2619200.1;transl_table=11 ##sequence-region JAJSBG010000032.1 1 20959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000032.1 Genbank region 1 20959 . + . ID=JAJSBG010000032.1:1..20959;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000032.1 Genbank gene 303 1094 . + . ID=gene-LVR01_08190;Name=LVR01_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08190 JAJSBG010000032.1 Protein Homology CDS 303 1094 . + 0 ID=cds-MCE2619201.1;Parent=gene-LVR01_08190;Dbxref=NCBI_GP:MCE2619201.1;Name=MCE2619201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399297.1;locus_tag=LVR01_08190;product=DUF2785 domain-containing protein;protein_id=MCE2619201.1;transl_table=11 JAJSBG010000032.1 Genbank gene 1204 1872 . + . ID=gene-LVR01_08195;Name=LVR01_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08195 JAJSBG010000032.1 Protein Homology CDS 1204 1872 . + 0 ID=cds-MCE2619202.1;Parent=gene-LVR01_08195;Dbxref=NCBI_GP:MCE2619202.1;Name=MCE2619202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714831.1;locus_tag=LVR01_08195;product=aquaporin;protein_id=MCE2619202.1;transl_table=11 JAJSBG010000032.1 Genbank gene 2045 2536 . - . ID=gene-LVR01_08200;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LVR01_08200 JAJSBG010000032.1 Protein Homology CDS 2045 2536 . - 0 ID=cds-MCE2619203.1;Parent=gene-LVR01_08200;Dbxref=NCBI_GP:MCE2619203.1;Name=MCE2619203.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082574.1;locus_tag=LVR01_08200;product=preQ(1) synthase;protein_id=MCE2619203.1;transl_table=11 JAJSBG010000032.1 Genbank gene 2555 3271 . - . ID=gene-LVR01_08205;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LVR01_08205 JAJSBG010000032.1 Protein Homology CDS 2555 3271 . - 0 ID=cds-MCE2619204.1;Parent=gene-LVR01_08205;Dbxref=NCBI_GP:MCE2619204.1;Name=MCE2619204.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003088059.1;locus_tag=LVR01_08205;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=MCE2619204.1;transl_table=11 JAJSBG010000032.1 Genbank gene 3264 3707 . - . ID=gene-LVR01_08210;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LVR01_08210 JAJSBG010000032.1 Protein Homology CDS 3264 3707 . - 0 ID=cds-MCE2619205.1;Parent=gene-LVR01_08210;Dbxref=NCBI_GP:MCE2619205.1;Name=MCE2619205.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464568.1;locus_tag=LVR01_08210;product=6-carboxytetrahydropterin synthase QueD;protein_id=MCE2619205.1;transl_table=11 JAJSBG010000032.1 Genbank gene 3707 4360 . - . ID=gene-LVR01_08215;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LVR01_08215 JAJSBG010000032.1 Protein Homology CDS 3707 4360 . - 0 ID=cds-MCE2619206.1;Parent=gene-LVR01_08215;Dbxref=NCBI_GP:MCE2619206.1;Name=MCE2619206.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256100.1;locus_tag=LVR01_08215;product=7-cyano-7-deazaguanine synthase QueC;protein_id=MCE2619206.1;transl_table=11 JAJSBG010000032.1 Genbank gene 4562 4876 . - . ID=gene-LVR01_08220;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LVR01_08220 JAJSBG010000032.1 Protein Homology CDS 4562 4876 . - 0 ID=cds-MCE2619207.1;Parent=gene-LVR01_08220;Dbxref=NCBI_GP:MCE2619207.1;Name=MCE2619207.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003004519.1;locus_tag=LVR01_08220;product=thioredoxin;protein_id=MCE2619207.1;transl_table=11 JAJSBG010000032.1 Genbank gene 4892 5113 . - . ID=gene-LVR01_08225;Name=LVR01_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08225 JAJSBG010000032.1 Protein Homology CDS 4892 5113 . - 0 ID=cds-MCE2619208.1;Parent=gene-LVR01_08225;Dbxref=NCBI_GP:MCE2619208.1;Name=MCE2619208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730461.1;locus_tag=LVR01_08225;product=DUF4649 family protein;protein_id=MCE2619208.1;transl_table=11 JAJSBG010000032.1 Genbank gene 5211 5591 . - . ID=gene-LVR01_08230;Name=LVR01_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08230 JAJSBG010000032.1 Protein Homology CDS 5211 5591 . - 0 ID=cds-MCE2619209.1;Parent=gene-LVR01_08230;Dbxref=NCBI_GP:MCE2619209.1;Name=MCE2619209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221621.1;locus_tag=LVR01_08230;product=MarR family transcriptional regulator;protein_id=MCE2619209.1;transl_table=11 JAJSBG010000032.1 Genbank gene 5718 6686 . - . ID=gene-LVR01_08235;Name=LVR01_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08235 JAJSBG010000032.1 Protein Homology CDS 5718 6686 . - 0 ID=cds-MCE2619210.1;Parent=gene-LVR01_08235;Dbxref=NCBI_GP:MCE2619210.1;Name=MCE2619210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028167.1;locus_tag=LVR01_08235;product=aromatic acid exporter family protein;protein_id=MCE2619210.1;transl_table=11 JAJSBG010000032.1 Genbank gene 6754 7959 . - . ID=gene-LVR01_08240;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LVR01_08240 JAJSBG010000032.1 Protein Homology CDS 6754 7959 . - 0 ID=cds-MCE2619211.1;Parent=gene-LVR01_08240;Dbxref=NCBI_GP:MCE2619211.1;Name=MCE2619211.1;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713440.1;locus_tag=LVR01_08240;product=serine/threonine transporter SstT;protein_id=MCE2619211.1;transl_table=11 JAJSBG010000032.1 Genbank gene 8098 8658 . + . ID=gene-LVR01_08245;Name=LVR01_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08245 JAJSBG010000032.1 Protein Homology CDS 8098 8658 . + 0 ID=cds-MCE2619212.1;Parent=gene-LVR01_08245;Dbxref=NCBI_GP:MCE2619212.1;Name=MCE2619212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398847.1;locus_tag=LVR01_08245;product=mechanosensitive ion channel family protein;protein_id=MCE2619212.1;transl_table=11 JAJSBG010000032.1 Genbank gene 8716 9624 . + . ID=gene-LVR01_08250;Name=LVR01_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08250 JAJSBG010000032.1 Protein Homology CDS 8716 9624 . + 0 ID=cds-MCE2619213.1;Parent=gene-LVR01_08250;Dbxref=NCBI_GP:MCE2619213.1;Name=MCE2619213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242243.1;locus_tag=LVR01_08250;product=magnesium transporter CorA family protein;protein_id=MCE2619213.1;transl_table=11 JAJSBG010000032.1 Genbank gene 9639 10166 . + . ID=gene-LVR01_08255;Name=LVR01_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08255 JAJSBG010000032.1 Protein Homology CDS 9639 10166 . + 0 ID=cds-MCE2619214.1;Parent=gene-LVR01_08255;Dbxref=NCBI_GP:MCE2619214.1;Name=MCE2619214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251415.1;locus_tag=LVR01_08255;product=YqeG family HAD IIIA-type phosphatase;protein_id=MCE2619214.1;transl_table=11 JAJSBG010000032.1 Genbank gene 10169 11275 . + . ID=gene-LVR01_08260;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=LVR01_08260 JAJSBG010000032.1 Protein Homology CDS 10169 11275 . + 0 ID=cds-MCE2619215.1;Parent=gene-LVR01_08260;Dbxref=NCBI_GP:MCE2619215.1;Name=MCE2619215.1;gbkey=CDS;gene=yqeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391231.1;locus_tag=LVR01_08260;product=ribosome biogenesis GTPase YqeH;protein_id=MCE2619215.1;transl_table=11 JAJSBG010000032.1 Genbank gene 11489 11800 . + . ID=gene-LVR01_08265;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LVR01_08265 JAJSBG010000032.1 Protein Homology CDS 11489 11800 . + 0 ID=cds-MCE2619216.1;Parent=gene-LVR01_08265;Dbxref=NCBI_GP:MCE2619216.1;Name=MCE2619216.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060164.1;locus_tag=LVR01_08265;product=ribosome assembly RNA-binding protein YhbY;protein_id=MCE2619216.1;transl_table=11 JAJSBG010000032.1 Genbank gene 11852 12481 . + . ID=gene-LVR01_08270;Name=LVR01_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08270 JAJSBG010000032.1 Protein Homology CDS 11852 12481 . + 0 ID=cds-MCE2619217.1;Parent=gene-LVR01_08270;Dbxref=NCBI_GP:MCE2619217.1;Name=MCE2619217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151307.1;locus_tag=LVR01_08270;product=nicotinate-nucleotide adenylyltransferase;protein_id=MCE2619217.1;transl_table=11 JAJSBG010000032.1 Genbank gene 12481 13074 . + . ID=gene-LVR01_08275;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=LVR01_08275 JAJSBG010000032.1 Protein Homology CDS 12481 13074 . + 0 ID=cds-MCE2619218.1;Parent=gene-LVR01_08275;Dbxref=NCBI_GP:MCE2619218.1;Name=MCE2619218.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331212.1;locus_tag=LVR01_08275;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=MCE2619218.1;transl_table=11 JAJSBG010000032.1 Genbank gene 13075 13575 . + . ID=gene-LVR01_08280;Name=LVR01_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08280 JAJSBG010000032.1 Protein Homology CDS 13075 13575 . + 0 ID=cds-MCE2619219.1;Parent=gene-LVR01_08280;Dbxref=NCBI_GP:MCE2619219.1;Name=MCE2619219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844697.1;locus_tag=LVR01_08280;product=cysteine hydrolase;protein_id=MCE2619219.1;transl_table=11 JAJSBG010000032.1 Genbank gene 13588 13941 . + . ID=gene-LVR01_08285;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LVR01_08285 JAJSBG010000032.1 Protein Homology CDS 13588 13941 . + 0 ID=cds-MCE2619220.1;Parent=gene-LVR01_08285;Dbxref=NCBI_GP:MCE2619220.1;Name=MCE2619220.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003018.1;locus_tag=LVR01_08285;product=ribosome silencing factor;protein_id=MCE2619220.1;transl_table=11 JAJSBG010000032.1 Genbank gene 14046 14792 . + . ID=gene-LVR01_08290;Name=LVR01_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08290 JAJSBG010000032.1 Protein Homology CDS 14046 14792 . + 0 ID=cds-MCE2619221.1;Parent=gene-LVR01_08290;Dbxref=NCBI_GP:MCE2619221.1;Name=MCE2619221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605145.1;locus_tag=LVR01_08290;product=methyltransferase domain-containing protein;protein_id=MCE2619221.1;transl_table=11 JAJSBG010000032.1 Genbank gene 14802 15899 . + . ID=gene-LVR01_08295;Name=LVR01_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08295 JAJSBG010000032.1 Protein Homology CDS 14802 15899 . + 0 ID=cds-MCE2619222.1;Parent=gene-LVR01_08295;Dbxref=NCBI_GP:MCE2619222.1;Name=MCE2619222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156376.1;locus_tag=LVR01_08295;product=nucleotidyltransferase;protein_id=MCE2619222.1;transl_table=11 JAJSBG010000032.1 Genbank gene 15969 16127 . - . ID=gene-LVR01_08300;Name=LVR01_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08300 JAJSBG010000032.1 GeneMarkS-2+ CDS 15969 16127 . - 0 ID=cds-MCE2619223.1;Parent=gene-LVR01_08300;Dbxref=NCBI_GP:MCE2619223.1;Name=MCE2619223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08300;product=hypothetical protein;protein_id=MCE2619223.1;transl_table=11 JAJSBG010000032.1 Genbank gene 16227 16481 . + . ID=gene-LVR01_08305;Name=LVR01_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08305 JAJSBG010000032.1 Protein Homology CDS 16227 16481 . + 0 ID=cds-MCE2619224.1;Parent=gene-LVR01_08305;Dbxref=NCBI_GP:MCE2619224.1;Name=MCE2619224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388574.1;locus_tag=LVR01_08305;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=MCE2619224.1;transl_table=11 JAJSBG010000032.1 Genbank gene 16485 16739 . + . ID=gene-LVR01_08310;Name=LVR01_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08310 JAJSBG010000032.1 Protein Homology CDS 16485 16739 . + 0 ID=cds-MCE2619225.1;Parent=gene-LVR01_08310;Dbxref=NCBI_GP:MCE2619225.1;Name=MCE2619225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152757.1;locus_tag=LVR01_08310;product=Txe/YoeB family addiction module toxin;protein_id=MCE2619225.1;transl_table=11 JAJSBG010000032.1 Genbank gene 17101 17391 . + . ID=gene-LVR01_08315;Name=LVR01_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08315 JAJSBG010000032.1 Protein Homology CDS 17101 17391 . + 0 ID=cds-MCE2619226.1;Parent=gene-LVR01_08315;Dbxref=NCBI_GP:MCE2619226.1;Name=MCE2619226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016283.2;locus_tag=LVR01_08315;product=KilA-N domain-containing protein;protein_id=MCE2619226.1;transl_table=11 JAJSBG010000032.1 Genbank gene 17543 17683 . + . ID=gene-LVR01_08320;Name=LVR01_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08320 JAJSBG010000032.1 Protein Homology CDS 17543 17683 . + 0 ID=cds-MCE2619227.1;Parent=gene-LVR01_08320;Dbxref=NCBI_GP:MCE2619227.1;Name=MCE2619227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000899899.1;locus_tag=LVR01_08320;product=hypothetical protein;protein_id=MCE2619227.1;transl_table=11 JAJSBG010000032.1 Genbank gene 17699 18484 . + . ID=gene-LVR01_08325;Name=LVR01_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08325 JAJSBG010000032.1 Protein Homology CDS 17699 18484 . + 0 ID=cds-MCE2619228.1;Parent=gene-LVR01_08325;Dbxref=NCBI_GP:MCE2619228.1;Name=MCE2619228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669602.1;locus_tag=LVR01_08325;product=DUF4564 domain-containing protein;protein_id=MCE2619228.1;transl_table=11 JAJSBG010000032.1 Genbank pseudogene 18621 18875 . + . ID=gene-LVR01_08330;Name=LVR01_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08330;pseudo=true JAJSBG010000032.1 Protein Homology CDS 18621 18875 . + 0 ID=cds-LVR01_08330;Parent=gene-LVR01_08330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004818768.1;locus_tag=LVR01_08330;product=recombinase family protein;pseudo=true;transl_table=11 JAJSBG010000032.1 Genbank gene 18957 20570 . + . ID=gene-LVR01_08335;Name=LVR01_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08335 JAJSBG010000032.1 Protein Homology CDS 18957 20570 . + 0 ID=cds-MCE2619229.1;Parent=gene-LVR01_08335;Dbxref=NCBI_GP:MCE2619229.1;Name=MCE2619229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520539.1;locus_tag=LVR01_08335;product=ribonuclease Y;protein_id=MCE2619229.1;transl_table=11 JAJSBG010000032.1 Genbank gene 20739 20924 . + . ID=gene-LVR01_08340;Name=LVR01_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08340 JAJSBG010000032.1 Protein Homology CDS 20739 20924 . + 0 ID=cds-MCE2619230.1;Parent=gene-LVR01_08340;Dbxref=NCBI_GP:MCE2619230.1;Name=MCE2619230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=LVR01_08340;product=hypothetical protein;protein_id=MCE2619230.1;transl_table=11 ##sequence-region JAJSBG010000033.1 1 20755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000033.1 Genbank region 1 20755 . + . ID=JAJSBG010000033.1:1..20755;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000033.1 Genbank gene 110 739 . - . ID=gene-LVR01_08345;Name=LVR01_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08345 JAJSBG010000033.1 Protein Homology CDS 110 739 . - 0 ID=cds-MCE2619231.1;Parent=gene-LVR01_08345;Dbxref=NCBI_GP:MCE2619231.1;Name=MCE2619231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690864.1;locus_tag=LVR01_08345;product=MBL fold metallo-hydrolase;protein_id=MCE2619231.1;transl_table=11 JAJSBG010000033.1 Genbank gene 1203 1367 . - . ID=gene-LVR01_08350;Name=LVR01_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08350 JAJSBG010000033.1 Protein Homology CDS 1203 1367 . - 0 ID=cds-MCE2619232.1;Parent=gene-LVR01_08350;Dbxref=NCBI_GP:MCE2619232.1;Name=MCE2619232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_08350;product=hypothetical protein;protein_id=MCE2619232.1;transl_table=11 JAJSBG010000033.1 Genbank gene 1667 3889 . + . ID=gene-LVR01_08355;Name=LVR01_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08355 JAJSBG010000033.1 Protein Homology CDS 1667 3889 . + 0 ID=cds-MCE2619233.1;Parent=gene-LVR01_08355;Dbxref=NCBI_GP:MCE2619233.1;Name=MCE2619233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019316080.1;locus_tag=LVR01_08355;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=MCE2619233.1;transl_table=11 JAJSBG010000033.1 Genbank gene 3919 4362 . + . ID=gene-LVR01_08360;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LVR01_08360 JAJSBG010000033.1 Protein Homology CDS 3919 4362 . + 0 ID=cds-MCE2619234.1;Parent=gene-LVR01_08360;Dbxref=NCBI_GP:MCE2619234.1;Name=MCE2619234.1;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866552.1;locus_tag=LVR01_08360;product=D-aminoacyl-tRNA deacylase;protein_id=MCE2619234.1;transl_table=11 JAJSBG010000033.1 Genbank gene 4394 4813 . - . ID=gene-LVR01_08365;Name=LVR01_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08365 JAJSBG010000033.1 Protein Homology CDS 4394 4813 . - 0 ID=cds-MCE2619235.1;Parent=gene-LVR01_08365;Dbxref=NCBI_GP:MCE2619235.1;Name=MCE2619235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789565.1;locus_tag=LVR01_08365;product=hypothetical protein;protein_id=MCE2619235.1;transl_table=11 JAJSBG010000033.1 Genbank gene 4978 5628 . - . ID=gene-LVR01_08370;Name=LVR01_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08370 JAJSBG010000033.1 Protein Homology CDS 4978 5628 . - 0 ID=cds-MCE2619236.1;Parent=gene-LVR01_08370;Dbxref=NCBI_GP:MCE2619236.1;Name=MCE2619236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188500.1;locus_tag=LVR01_08370;product=metal-dependent transcriptional regulator;protein_id=MCE2619236.1;transl_table=11 JAJSBG010000033.1 Genbank gene 5740 6582 . + . ID=gene-LVR01_08375;Name=LVR01_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08375 JAJSBG010000033.1 Protein Homology CDS 5740 6582 . + 0 ID=cds-MCE2619237.1;Parent=gene-LVR01_08375;Dbxref=NCBI_GP:MCE2619237.1;Name=MCE2619237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862319.1;locus_tag=LVR01_08375;product=metallophosphoesterase family protein;protein_id=MCE2619237.1;transl_table=11 JAJSBG010000033.1 Genbank gene 6658 7095 . + . ID=gene-LVR01_08380;Name=LVR01_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08380 JAJSBG010000033.1 Protein Homology CDS 6658 7095 . + 0 ID=cds-MCE2619238.1;Parent=gene-LVR01_08380;Dbxref=NCBI_GP:MCE2619238.1;Name=MCE2619238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263219.1;locus_tag=LVR01_08380;product=Rrf2 family transcriptional regulator;protein_id=MCE2619238.1;transl_table=11 JAJSBG010000033.1 Genbank gene 7303 8376 . - . ID=gene-LVR01_08385;Name=LVR01_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08385 JAJSBG010000033.1 Protein Homology CDS 7303 8376 . - 0 ID=cds-MCE2619239.1;Parent=gene-LVR01_08385;Dbxref=NCBI_GP:MCE2619239.1;Name=MCE2619239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273827.1;locus_tag=LVR01_08385;product=DUF2974 domain-containing protein;protein_id=MCE2619239.1;transl_table=11 JAJSBG010000033.1 Genbank gene 8531 9208 . + . ID=gene-LVR01_08390;Name=LVR01_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08390 JAJSBG010000033.1 Protein Homology CDS 8531 9208 . + 0 ID=cds-MCE2619240.1;Parent=gene-LVR01_08390;Dbxref=NCBI_GP:MCE2619240.1;Name=MCE2619240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000548969.1;locus_tag=LVR01_08390;product=response regulator transcription factor;protein_id=MCE2619240.1;transl_table=11 JAJSBG010000033.1 Genbank gene 9201 10175 . + . ID=gene-LVR01_08395;Name=LVR01_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08395 JAJSBG010000033.1 Protein Homology CDS 9201 10175 . + 0 ID=cds-MCE2619241.1;Parent=gene-LVR01_08395;Dbxref=NCBI_GP:MCE2619241.1;Name=MCE2619241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397620.1;locus_tag=LVR01_08395;product=sensor histidine kinase;protein_id=MCE2619241.1;transl_table=11 JAJSBG010000033.1 Genbank gene 10222 12165 . - . ID=gene-LVR01_08400;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LVR01_08400 JAJSBG010000033.1 Protein Homology CDS 10222 12165 . - 0 ID=cds-MCE2619242.1;Parent=gene-LVR01_08400;Dbxref=NCBI_GP:MCE2619242.1;Name=MCE2619242.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608363.1;locus_tag=LVR01_08400;product=threonine--tRNA ligase;protein_id=MCE2619242.1;transl_table=11 JAJSBG010000033.1 Genbank gene 12517 12861 . - . ID=gene-LVR01_08405;Name=LVR01_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08405 JAJSBG010000033.1 Protein Homology CDS 12517 12861 . - 0 ID=cds-MCE2619243.1;Parent=gene-LVR01_08405;Dbxref=NCBI_GP:MCE2619243.1;Name=MCE2619243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235098.1;locus_tag=LVR01_08405;product=hypothetical protein;protein_id=MCE2619243.1;transl_table=11 JAJSBG010000033.1 Genbank gene 13066 13335 . + . ID=gene-LVR01_08410;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LVR01_08410 JAJSBG010000033.1 Protein Homology CDS 13066 13335 . + 0 ID=cds-MCE2619244.1;Parent=gene-LVR01_08410;Dbxref=NCBI_GP:MCE2619244.1;Name=MCE2619244.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=LVR01_08410;product=30S ribosomal protein S15;protein_id=MCE2619244.1;transl_table=11 JAJSBG010000033.1 Genbank gene 14155 14772 . + . ID=gene-LVR01_08415;Name=LVR01_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08415 JAJSBG010000033.1 Protein Homology CDS 14155 14772 . + 0 ID=cds-MCE2619245.1;Parent=gene-LVR01_08415;Dbxref=NCBI_GP:MCE2619245.1;Name=MCE2619245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000531723.1;locus_tag=LVR01_08415;product=CadD family cadmium resistance transporter;protein_id=MCE2619245.1;transl_table=11 JAJSBG010000033.1 Genbank gene 14957 15706 . - . ID=gene-LVR01_08420;Name=LVR01_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08420 JAJSBG010000033.1 Protein Homology CDS 14957 15706 . - 0 ID=cds-MCE2619246.1;Parent=gene-LVR01_08420;Dbxref=NCBI_GP:MCE2619246.1;Name=MCE2619246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500209.1;locus_tag=LVR01_08420;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=MCE2619246.1;transl_table=11 JAJSBG010000033.1 Genbank gene 15839 18175 . + . ID=gene-LVR01_08425;Name=LVR01_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08425 JAJSBG010000033.1 Protein Homology CDS 15839 18175 . + 0 ID=cds-MCE2619247.1;Parent=gene-LVR01_08425;Dbxref=NCBI_GP:MCE2619247.1;Name=MCE2619247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000360031.1;locus_tag=LVR01_08425;product=cation-translocating P-type ATPase;protein_id=MCE2619247.1;transl_table=11 JAJSBG010000033.1 Genbank pseudogene 18737 20076 . - . ID=gene-LVR01_08430;Name=LVR01_08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08430;pseudo=true JAJSBG010000033.1 Protein Homology CDS 18737 20076 . - 0 ID=cds-LVR01_08430;Parent=gene-LVR01_08430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=LVR01_08430;product=IS1380 family transposase;pseudo=true;transl_table=11 JAJSBG010000033.1 Genbank gene 20271 20387 . + . ID=gene-LVR01_08435;Name=LVR01_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08435 JAJSBG010000033.1 Protein Homology CDS 20271 20387 . + 0 ID=cds-MCE2619248.1;Parent=gene-LVR01_08435;Dbxref=NCBI_GP:MCE2619248.1;Name=MCE2619248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022534.2;locus_tag=LVR01_08435;product=hypothetical protein;protein_id=MCE2619248.1;transl_table=11 JAJSBG010000033.1 Genbank gene 20458 20649 . + . ID=gene-LVR01_08440;Name=LVR01_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08440 JAJSBG010000033.1 Protein Homology CDS 20458 20649 . + 0 ID=cds-MCE2619249.1;Parent=gene-LVR01_08440;Dbxref=NCBI_GP:MCE2619249.1;Name=MCE2619249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003069.1;locus_tag=LVR01_08440;product=helix-turn-helix domain-containing protein;protein_id=MCE2619249.1;transl_table=11 ##sequence-region JAJSBG010000034.1 1 19882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000034.1 Genbank region 1 19882 . + . ID=JAJSBG010000034.1:1..19882;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000034.1 Genbank gene 1 319 . - . ID=gene-LVR01_08445;Name=LVR01_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08445;partial=true;start_range=.,1 JAJSBG010000034.1 Protein Homology CDS 1 319 . - 0 ID=cds-MCE2619250.1;Parent=gene-LVR01_08445;Dbxref=NCBI_GP:MCE2619250.1;Name=MCE2619250.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037692.2;locus_tag=LVR01_08445;partial=true;product=cell surface protein;protein_id=MCE2619250.1;start_range=.,1;transl_table=11 JAJSBG010000034.1 Genbank pseudogene 229 1386 . - . ID=gene-LVR01_08450;Name=LVR01_08450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08450;pseudo=true JAJSBG010000034.1 Protein Homology CDS 229 1386 . - 0 ID=cds-LVR01_08450;Parent=gene-LVR01_08450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021424.1;locus_tag=LVR01_08450;product=MucBP domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000034.1 Genbank gene 3602 5317 . + . ID=gene-LVR01_08455;Name=LVR01_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08455 JAJSBG010000034.1 Protein Homology CDS 3602 5317 . + 0 ID=cds-MCE2619251.1;Parent=gene-LVR01_08455;Dbxref=NCBI_GP:MCE2619251.1;Name=MCE2619251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252698.1;locus_tag=LVR01_08455;product=phospho-sugar mutase;protein_id=MCE2619251.1;transl_table=11 JAJSBG010000034.1 Genbank gene 5429 5776 . + . ID=gene-LVR01_08460;Name=LVR01_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08460 JAJSBG010000034.1 Protein Homology CDS 5429 5776 . + 0 ID=cds-MCE2619252.1;Parent=gene-LVR01_08460;Dbxref=NCBI_GP:MCE2619252.1;Name=MCE2619252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434646.1;locus_tag=LVR01_08460;product=thiol reductase thioredoxin;protein_id=MCE2619252.1;transl_table=11 JAJSBG010000034.1 Genbank gene 6054 6890 . - . ID=gene-LVR01_08465;Name=LVR01_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08465 JAJSBG010000034.1 Protein Homology CDS 6054 6890 . - 0 ID=cds-MCE2619253.1;Parent=gene-LVR01_08465;Dbxref=NCBI_GP:MCE2619253.1;Name=MCE2619253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759190.1;locus_tag=LVR01_08465;product=amino acid ABC transporter substrate-binding protein;protein_id=MCE2619253.1;transl_table=11 JAJSBG010000034.1 Genbank gene 6903 7532 . - . ID=gene-LVR01_08470;Name=LVR01_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08470 JAJSBG010000034.1 Protein Homology CDS 6903 7532 . - 0 ID=cds-MCE2619254.1;Parent=gene-LVR01_08470;Dbxref=NCBI_GP:MCE2619254.1;Name=MCE2619254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891751.1;locus_tag=LVR01_08470;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2619254.1;transl_table=11 JAJSBG010000034.1 Genbank gene 7542 8183 . - . ID=gene-LVR01_08475;Name=LVR01_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08475 JAJSBG010000034.1 Protein Homology CDS 7542 8183 . - 0 ID=cds-MCE2619255.1;Parent=gene-LVR01_08475;Dbxref=NCBI_GP:MCE2619255.1;Name=MCE2619255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253193.1;locus_tag=LVR01_08475;product=amino acid ABC transporter permease;protein_id=MCE2619255.1;transl_table=11 JAJSBG010000034.1 Genbank gene 8329 9558 . - . ID=gene-LVR01_08480;Name=LVR01_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08480 JAJSBG010000034.1 Protein Homology CDS 8329 9558 . - 0 ID=cds-MCE2619256.1;Parent=gene-LVR01_08480;Dbxref=NCBI_GP:MCE2619256.1;Name=MCE2619256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864303.1;locus_tag=LVR01_08480;product=tetratricopeptide repeat protein;protein_id=MCE2619256.1;transl_table=11 JAJSBG010000034.1 Genbank gene 9548 10714 . - . ID=gene-LVR01_08485;Name=LVR01_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08485 JAJSBG010000034.1 Protein Homology CDS 9548 10714 . - 0 ID=cds-MCE2619257.1;Parent=gene-LVR01_08485;Dbxref=NCBI_GP:MCE2619257.1;Name=MCE2619257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435446.1;locus_tag=LVR01_08485;product=AI-2E family transporter;protein_id=MCE2619257.1;transl_table=11 JAJSBG010000034.1 Genbank gene 10858 11871 . + . ID=gene-LVR01_08490;Name=LVR01_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08490 JAJSBG010000034.1 Protein Homology CDS 10858 11871 . + 0 ID=cds-MCE2619258.1;Parent=gene-LVR01_08490;Dbxref=NCBI_GP:MCE2619258.1;Name=MCE2619258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665618.1;locus_tag=LVR01_08490;product=lactonase family protein;protein_id=MCE2619258.1;transl_table=11 JAJSBG010000034.1 Genbank gene 12115 12534 . - . ID=gene-LVR01_08495;Name=LVR01_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08495 JAJSBG010000034.1 Protein Homology CDS 12115 12534 . - 0 ID=cds-MCE2619259.1;Parent=gene-LVR01_08495;Dbxref=NCBI_GP:MCE2619259.1;Name=MCE2619259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397408.1;locus_tag=LVR01_08495;product=F0F1 ATP synthase subunit epsilon;protein_id=MCE2619259.1;transl_table=11 JAJSBG010000034.1 Genbank gene 12545 13951 . - . ID=gene-LVR01_08500;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LVR01_08500 JAJSBG010000034.1 Protein Homology CDS 12545 13951 . - 0 ID=cds-MCE2619260.1;Parent=gene-LVR01_08500;Dbxref=NCBI_GP:MCE2619260.1;Name=MCE2619260.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=LVR01_08500;product=F0F1 ATP synthase subunit beta;protein_id=MCE2619260.1;transl_table=11 JAJSBG010000034.1 Genbank gene 14142 15020 . - . ID=gene-LVR01_08505;Name=LVR01_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08505 JAJSBG010000034.1 Protein Homology CDS 14142 15020 . - 0 ID=cds-MCE2619261.1;Parent=gene-LVR01_08505;Dbxref=NCBI_GP:MCE2619261.1;Name=MCE2619261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895995.1;locus_tag=LVR01_08505;product=F0F1 ATP synthase subunit gamma;protein_id=MCE2619261.1;transl_table=11 JAJSBG010000034.1 Genbank gene 15036 16541 . - . ID=gene-LVR01_08510;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LVR01_08510 JAJSBG010000034.1 Protein Homology CDS 15036 16541 . - 0 ID=cds-MCE2619262.1;Parent=gene-LVR01_08510;Dbxref=NCBI_GP:MCE2619262.1;Name=MCE2619262.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889023.1;locus_tag=LVR01_08510;product=F0F1 ATP synthase subunit alpha;protein_id=MCE2619262.1;transl_table=11 JAJSBG010000034.1 Genbank gene 16556 17092 . - . ID=gene-LVR01_08515;Name=LVR01_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08515 JAJSBG010000034.1 Protein Homology CDS 16556 17092 . - 0 ID=cds-MCE2619263.1;Parent=gene-LVR01_08515;Dbxref=NCBI_GP:MCE2619263.1;Name=MCE2619263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358986.1;locus_tag=LVR01_08515;product=F0F1 ATP synthase subunit delta;protein_id=MCE2619263.1;transl_table=11 JAJSBG010000034.1 Genbank gene 17092 17586 . - . ID=gene-LVR01_08520;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LVR01_08520 JAJSBG010000034.1 Protein Homology CDS 17092 17586 . - 0 ID=cds-MCE2619264.1;Parent=gene-LVR01_08520;Dbxref=NCBI_GP:MCE2619264.1;Name=MCE2619264.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145707.1;locus_tag=LVR01_08520;product=F0F1 ATP synthase subunit B;protein_id=MCE2619264.1;transl_table=11 JAJSBG010000034.1 Genbank gene 17600 18316 . - . ID=gene-LVR01_08525;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LVR01_08525 JAJSBG010000034.1 Protein Homology CDS 17600 18316 . - 0 ID=cds-MCE2619265.1;Parent=gene-LVR01_08525;Dbxref=NCBI_GP:MCE2619265.1;Name=MCE2619265.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392848.1;locus_tag=LVR01_08525;product=F0F1 ATP synthase subunit A;protein_id=MCE2619265.1;transl_table=11 JAJSBG010000034.1 Genbank gene 18351 18551 . - . ID=gene-LVR01_08530;Name=LVR01_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08530 JAJSBG010000034.1 Protein Homology CDS 18351 18551 . - 0 ID=cds-MCE2619266.1;Parent=gene-LVR01_08530;Dbxref=NCBI_GP:MCE2619266.1;Name=MCE2619266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545704.1;locus_tag=LVR01_08530;product=F0F1 ATP synthase subunit C;protein_id=MCE2619266.1;transl_table=11 JAJSBG010000034.1 Genbank gene 18981 19394 . - . ID=gene-LVR01_08535;Name=LVR01_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08535 JAJSBG010000034.1 Protein Homology CDS 18981 19394 . - 0 ID=cds-MCE2619267.1;Parent=gene-LVR01_08535;Dbxref=NCBI_GP:MCE2619267.1;Name=MCE2619267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499170.1;locus_tag=LVR01_08535;product=GNAT family N-acetyltransferase;protein_id=MCE2619267.1;transl_table=11 JAJSBG010000034.1 Genbank gene 19620 19882 . + . ID=gene-LVR01_08540;Name=LVR01_08540;end_range=19882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08540;partial=true JAJSBG010000034.1 Protein Homology CDS 19620 19882 . + 0 ID=cds-MCE2619268.1;Parent=gene-LVR01_08540;Dbxref=NCBI_GP:MCE2619268.1;Name=MCE2619268.1;end_range=19882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_08540;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCE2619268.1;transl_table=11 ##sequence-region JAJSBG010000035.1 1 17522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000035.1 Genbank region 1 17522 . + . ID=JAJSBG010000035.1:1..17522;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000035.1 Genbank gene 127 312 . - . ID=gene-LVR01_08545;Name=LVR01_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08545 JAJSBG010000035.1 Protein Homology CDS 127 312 . - 0 ID=cds-MCE2619269.1;Parent=gene-LVR01_08545;Dbxref=NCBI_GP:MCE2619269.1;Name=MCE2619269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=LVR01_08545;product=hypothetical protein;protein_id=MCE2619269.1;transl_table=11 JAJSBG010000035.1 Genbank gene 449 3571 . - . ID=gene-LVR01_08550;Name=LVR01_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08550 JAJSBG010000035.1 Protein Homology CDS 449 3571 . - 0 ID=cds-MCE2619270.1;Parent=gene-LVR01_08550;Dbxref=NCBI_GP:MCE2619270.1;Name=MCE2619270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828348.1;locus_tag=LVR01_08550;product=SNF2 family helicase;protein_id=MCE2619270.1;transl_table=11 JAJSBG010000035.1 Genbank pseudogene 3784 5021 . - . ID=gene-LVR01_08555;Name=LVR01_08555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08555;pseudo=true JAJSBG010000035.1 Protein Homology CDS 3784 5021 . - 0 ID=cds-LVR01_08555;Parent=gene-LVR01_08555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397624.1;locus_tag=LVR01_08555;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000035.1 Genbank gene 5369 6046 . + . ID=gene-LVR01_08560;Name=LVR01_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08560 JAJSBG010000035.1 Protein Homology CDS 5369 6046 . + 0 ID=cds-MCE2619271.1;Parent=gene-LVR01_08560;Dbxref=NCBI_GP:MCE2619271.1;Name=MCE2619271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624068.1;locus_tag=LVR01_08560;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=MCE2619271.1;transl_table=11 JAJSBG010000035.1 Genbank gene 6033 6830 . + . ID=gene-LVR01_08565;Name=LVR01_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08565 JAJSBG010000035.1 Protein Homology CDS 6033 6830 . + 0 ID=cds-MCE2619272.1;Parent=gene-LVR01_08565;Dbxref=NCBI_GP:MCE2619272.1;Name=MCE2619272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881127.1;locus_tag=LVR01_08565;product=Nif3-like dinuclear metal center hexameric protein;protein_id=MCE2619272.1;transl_table=11 JAJSBG010000035.1 Genbank gene 7248 10187 . + . ID=gene-LVR01_08570;Name=LVR01_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08570 JAJSBG010000035.1 Protein Homology CDS 7248 10187 . + 0 ID=cds-MCE2619273.1;Parent=gene-LVR01_08570;Dbxref=NCBI_GP:MCE2619273.1;Name=MCE2619273.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399288.1;locus_tag=LVR01_08570;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2619273.1;transl_table=11 JAJSBG010000035.1 Genbank gene 10240 13258 . + . ID=gene-LVR01_08575;Name=LVR01_08575;end_range=13258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08575;partial=true JAJSBG010000035.1 Protein Homology CDS 10240 13258 . + 0 ID=cds-MCE2619274.1;Parent=gene-LVR01_08575;Dbxref=NCBI_GP:MCE2619274.1;Name=MCE2619274.1;end_range=13258,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019192.2;locus_tag=LVR01_08575;partial=true;product=hypothetical protein;protein_id=MCE2619274.1;transl_table=11 JAJSBG010000035.1 Genbank gene 13359 14422 . + . ID=gene-LVR01_08580;Name=LVR01_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08580;partial=true;start_range=.,13359 JAJSBG010000035.1 Protein Homology CDS 13359 14422 . + 2 ID=cds-MCE2619275.1;Parent=gene-LVR01_08580;Dbxref=NCBI_GP:MCE2619275.1;Name=MCE2619275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040145.1;locus_tag=LVR01_08580;partial=true;product=hypothetical protein;protein_id=MCE2619275.1;start_range=.,13359;transl_table=11 JAJSBG010000035.1 Genbank gene 15381 16007 . + . ID=gene-LVR01_08585;Name=LVR01_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08585 JAJSBG010000035.1 Protein Homology CDS 15381 16007 . + 0 ID=cds-MCE2619276.1;Parent=gene-LVR01_08585;Dbxref=NCBI_GP:MCE2619276.1;Name=MCE2619276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285080.1;locus_tag=LVR01_08585;product=Abi family protein;protein_id=MCE2619276.1;transl_table=11 JAJSBG010000035.1 Genbank gene 16224 17327 . + . ID=gene-LVR01_08590;Name=LVR01_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08590 JAJSBG010000035.1 Protein Homology CDS 16224 17327 . + 0 ID=cds-MCE2619277.1;Parent=gene-LVR01_08590;Dbxref=NCBI_GP:MCE2619277.1;Name=MCE2619277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397627.1;locus_tag=LVR01_08590;product=FAD-binding oxidoreductase;protein_id=MCE2619277.1;transl_table=11 JAJSBG010000035.1 Genbank gene 17334 17522 . + . ID=gene-LVR01_08595;Name=LVR01_08595;end_range=17522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08595;partial=true JAJSBG010000035.1 GeneMarkS-2+ CDS 17334 17522 . + 0 ID=cds-MCE2619278.1;Parent=gene-LVR01_08595;Dbxref=NCBI_GP:MCE2619278.1;Name=MCE2619278.1;end_range=17522,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08595;partial=true;product=hypothetical protein;protein_id=MCE2619278.1;transl_table=11 ##sequence-region JAJSBG010000036.1 1 17399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000036.1 Genbank region 1 17399 . + . ID=JAJSBG010000036.1:1..17399;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000036.1 Genbank gene 1 1150 . - . ID=gene-LVR01_08600;Name=LVR01_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08600;partial=true;start_range=.,1 JAJSBG010000036.1 Protein Homology CDS 1 1150 . - 0 ID=cds-MCE2619279.1;Parent=gene-LVR01_08600;Dbxref=NCBI_GP:MCE2619279.1;Name=MCE2619279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=LVR01_08600;partial=true;product=tail fiber domain-containing protein;protein_id=MCE2619279.1;start_range=.,1;transl_table=11 JAJSBG010000036.1 Genbank gene 1155 1505 . - . ID=gene-LVR01_08605;Name=LVR01_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08605 JAJSBG010000036.1 Protein Homology CDS 1155 1505 . - 0 ID=cds-MCE2619280.1;Parent=gene-LVR01_08605;Dbxref=NCBI_GP:MCE2619280.1;Name=MCE2619280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399159.1;locus_tag=LVR01_08605;product=hypothetical protein;protein_id=MCE2619280.1;transl_table=11 JAJSBG010000036.1 Genbank gene 1514 4540 . - . ID=gene-LVR01_08610;Name=LVR01_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08610 JAJSBG010000036.1 Protein Homology CDS 1514 4540 . - 0 ID=cds-MCE2619281.1;Parent=gene-LVR01_08610;Dbxref=NCBI_GP:MCE2619281.1;Name=MCE2619281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212166.1;locus_tag=LVR01_08610;product=hypothetical protein;protein_id=MCE2619281.1;transl_table=11 JAJSBG010000036.1 Genbank pseudogene 4860 5405 . - . ID=gene-LVR01_08615;Name=LVR01_08615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08615;pseudo=true JAJSBG010000036.1 Protein Homology CDS 4860 5405 . - 0 ID=cds-LVR01_08615;Parent=gene-LVR01_08615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212172.1;locus_tag=LVR01_08615;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000036.1 Genbank gene 5392 5742 . - . ID=gene-LVR01_08620;Name=LVR01_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08620 JAJSBG010000036.1 Protein Homology CDS 5392 5742 . - 0 ID=cds-MCE2619282.1;Parent=gene-LVR01_08620;Dbxref=NCBI_GP:MCE2619282.1;Name=MCE2619282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478007.1;locus_tag=LVR01_08620;product=hypothetical protein;protein_id=MCE2619282.1;transl_table=11 JAJSBG010000036.1 Genbank gene 5781 6161 . - . ID=gene-LVR01_08625;Name=LVR01_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08625 JAJSBG010000036.1 Protein Homology CDS 5781 6161 . - 0 ID=cds-MCE2619283.1;Parent=gene-LVR01_08625;Dbxref=NCBI_GP:MCE2619283.1;Name=MCE2619283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185634.1;locus_tag=LVR01_08625;product=DUF6096 family protein;protein_id=MCE2619283.1;transl_table=11 JAJSBG010000036.1 Genbank gene 6166 6579 . - . ID=gene-LVR01_08630;Name=LVR01_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08630 JAJSBG010000036.1 Protein Homology CDS 6166 6579 . - 0 ID=cds-MCE2619284.1;Parent=gene-LVR01_08630;Dbxref=NCBI_GP:MCE2619284.1;Name=MCE2619284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880678.1;locus_tag=LVR01_08630;product=phage tail protein;protein_id=MCE2619284.1;transl_table=11 JAJSBG010000036.1 Genbank gene 6582 6950 . - . ID=gene-LVR01_08635;Name=LVR01_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08635 JAJSBG010000036.1 Protein Homology CDS 6582 6950 . - 0 ID=cds-MCE2619285.1;Parent=gene-LVR01_08635;Dbxref=NCBI_GP:MCE2619285.1;Name=MCE2619285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608233.1;locus_tag=LVR01_08635;product=hypothetical protein;protein_id=MCE2619285.1;transl_table=11 JAJSBG010000036.1 Genbank gene 6947 7462 . - . ID=gene-LVR01_08640;Name=LVR01_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08640 JAJSBG010000036.1 Protein Homology CDS 6947 7462 . - 0 ID=cds-MCE2619286.1;Parent=gene-LVR01_08640;Dbxref=NCBI_GP:MCE2619286.1;Name=MCE2619286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015942.1;locus_tag=LVR01_08640;product=HK97 gp10 family phage protein;protein_id=MCE2619286.1;transl_table=11 JAJSBG010000036.1 Genbank gene 7437 7775 . - . ID=gene-LVR01_08645;Name=LVR01_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08645 JAJSBG010000036.1 Protein Homology CDS 7437 7775 . - 0 ID=cds-MCE2619287.1;Parent=gene-LVR01_08645;Dbxref=NCBI_GP:MCE2619287.1;Name=MCE2619287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478943.1;locus_tag=LVR01_08645;product=hypothetical protein;protein_id=MCE2619287.1;transl_table=11 JAJSBG010000036.1 Genbank gene 7756 8067 . - . ID=gene-LVR01_08650;Name=LVR01_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08650 JAJSBG010000036.1 Protein Homology CDS 7756 8067 . - 0 ID=cds-MCE2619288.1;Parent=gene-LVR01_08650;Dbxref=NCBI_GP:MCE2619288.1;Name=MCE2619288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866508.1;locus_tag=LVR01_08650;product=phage head-tail adapter protein;protein_id=MCE2619288.1;transl_table=11 JAJSBG010000036.1 Genbank gene 8069 8257 . - . ID=gene-LVR01_08655;Name=LVR01_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08655 JAJSBG010000036.1 Protein Homology CDS 8069 8257 . - 0 ID=cds-MCE2619289.1;Parent=gene-LVR01_08655;Dbxref=NCBI_GP:MCE2619289.1;Name=MCE2619289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669348.1;locus_tag=LVR01_08655;product=hypothetical protein;protein_id=MCE2619289.1;transl_table=11 JAJSBG010000036.1 Genbank gene 8247 8429 . - . ID=gene-LVR01_08660;Name=LVR01_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08660 JAJSBG010000036.1 Protein Homology CDS 8247 8429 . - 0 ID=cds-MCE2619290.1;Parent=gene-LVR01_08660;Dbxref=NCBI_GP:MCE2619290.1;Name=MCE2619290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054935.1;locus_tag=LVR01_08660;product=Rho termination factor N-terminal domain-containing protein;protein_id=MCE2619290.1;transl_table=11 JAJSBG010000036.1 Genbank gene 8441 9283 . - . ID=gene-LVR01_08665;Name=LVR01_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08665 JAJSBG010000036.1 Protein Homology CDS 8441 9283 . - 0 ID=cds-MCE2619291.1;Parent=gene-LVR01_08665;Dbxref=NCBI_GP:MCE2619291.1;Name=MCE2619291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123892.1;locus_tag=LVR01_08665;product=N4-gp56 family major capsid protein;protein_id=MCE2619291.1;transl_table=11 JAJSBG010000036.1 Genbank gene 9289 9858 . - . ID=gene-LVR01_08670;Name=LVR01_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08670 JAJSBG010000036.1 Protein Homology CDS 9289 9858 . - 0 ID=cds-MCE2619292.1;Parent=gene-LVR01_08670;Dbxref=NCBI_GP:MCE2619292.1;Name=MCE2619292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001559.1;locus_tag=LVR01_08670;product=DUF4355 domain-containing protein;protein_id=MCE2619292.1;transl_table=11 JAJSBG010000036.1 Genbank gene 10148 11698 . - . ID=gene-LVR01_08675;Name=LVR01_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08675 JAJSBG010000036.1 Protein Homology CDS 10148 11698 . - 0 ID=cds-MCE2619293.1;Parent=gene-LVR01_08675;Dbxref=NCBI_GP:MCE2619293.1;Name=MCE2619293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795721.1;locus_tag=LVR01_08675;product=minor capsid protein;protein_id=MCE2619293.1;transl_table=11 JAJSBG010000036.1 Genbank pseudogene 11607 12062 . - . ID=gene-LVR01_08680;Name=LVR01_08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08680;pseudo=true JAJSBG010000036.1 Protein Homology CDS 11607 12062 . - 0 ID=cds-LVR01_08680;Parent=gene-LVR01_08680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001854690.1;locus_tag=LVR01_08680;product=phage portal protein;pseudo=true;transl_table=11 JAJSBG010000036.1 Genbank gene 12274 12807 . - . ID=gene-LVR01_08685;Name=LVR01_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08685 JAJSBG010000036.1 Protein Homology CDS 12274 12807 . - 0 ID=cds-MCE2619294.1;Parent=gene-LVR01_08685;Dbxref=NCBI_GP:MCE2619294.1;Name=MCE2619294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588570.1;locus_tag=LVR01_08685;product=hypothetical protein;protein_id=MCE2619294.1;transl_table=11 JAJSBG010000036.1 Genbank pseudogene 12942 13955 . - . ID=gene-LVR01_08690;Name=LVR01_08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08690;pseudo=true JAJSBG010000036.1 Protein Homology CDS 12942 13955 . - 0 ID=cds-LVR01_08690;Parent=gene-LVR01_08690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399164.1;locus_tag=LVR01_08690;product=phage portal protein;pseudo=true;transl_table=11 JAJSBG010000036.1 Genbank gene 13967 15184 . - . ID=gene-LVR01_08695;Name=LVR01_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08695 JAJSBG010000036.1 Protein Homology CDS 13967 15184 . - 0 ID=cds-MCE2619295.1;Parent=gene-LVR01_08695;Dbxref=NCBI_GP:MCE2619295.1;Name=MCE2619295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165639.1;locus_tag=LVR01_08695;product=PBSX family phage terminase large subunit;protein_id=MCE2619295.1;transl_table=11 JAJSBG010000036.1 Genbank gene 15171 15665 . - . ID=gene-LVR01_08700;Name=LVR01_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08700 JAJSBG010000036.1 Protein Homology CDS 15171 15665 . - 0 ID=cds-MCE2619296.1;Parent=gene-LVR01_08700;Dbxref=NCBI_GP:MCE2619296.1;Name=MCE2619296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351060.1;locus_tag=LVR01_08700;product=terminase small subunit;protein_id=MCE2619296.1;transl_table=11 JAJSBG010000036.1 Genbank gene 16154 16600 . - . ID=gene-LVR01_08705;Name=LVR01_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08705 JAJSBG010000036.1 Protein Homology CDS 16154 16600 . - 0 ID=cds-MCE2619297.1;Parent=gene-LVR01_08705;Dbxref=NCBI_GP:MCE2619297.1;Name=MCE2619297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973648.1;locus_tag=LVR01_08705;product=transcriptional regulator;protein_id=MCE2619297.1;transl_table=11 JAJSBG010000036.1 Genbank gene 16729 16944 . + . ID=gene-LVR01_08710;Name=LVR01_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08710 JAJSBG010000036.1 Protein Homology CDS 16729 16944 . + 0 ID=cds-MCE2619298.1;Parent=gene-LVR01_08710;Dbxref=NCBI_GP:MCE2619298.1;Name=MCE2619298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098933.1;locus_tag=LVR01_08710;product=AbrB family transcriptional regulator;protein_id=MCE2619298.1;transl_table=11 JAJSBG010000036.1 Genbank gene 16928 17281 . + . ID=gene-LVR01_08715;Name=LVR01_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08715 JAJSBG010000036.1 Protein Homology CDS 16928 17281 . + 0 ID=cds-MCE2619299.1;Parent=gene-LVR01_08715;Dbxref=NCBI_GP:MCE2619299.1;Name=MCE2619299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125658.1;locus_tag=LVR01_08715;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=MCE2619299.1;transl_table=11 JAJSBG010000036.1 Genbank gene 17302 17394 . - . ID=gene-LVR01_08720;Name=LVR01_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08720 JAJSBG010000036.1 Protein Homology CDS 17302 17394 . - 0 ID=cds-MCE2619300.1;Parent=gene-LVR01_08720;Dbxref=NCBI_GP:MCE2619300.1;Name=MCE2619300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023181.2;locus_tag=LVR01_08720;product=DUF3310 domain-containing protein;protein_id=MCE2619300.1;transl_table=11 ##sequence-region JAJSBG010000037.1 1 17304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000037.1 Genbank region 1 17304 . + . ID=JAJSBG010000037.1:1..17304;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000037.1 Genbank gene 58 130 . + . ID=gene-LVR01_08725;Name=LVR01_08725;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08725 JAJSBG010000037.1 tRNAscan-SE tRNA 58 130 . + . ID=rna-LVR01_08725;Parent=gene-LVR01_08725;anticodon=(pos:91..93);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08725;product=tRNA-Asp JAJSBG010000037.1 tRNAscan-SE exon 58 130 . + . ID=exon-LVR01_08725-1;Parent=rna-LVR01_08725;anticodon=(pos:91..93);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08725;product=tRNA-Asp JAJSBG010000037.1 Genbank gene 155 227 . + . ID=gene-LVR01_08730;Name=LVR01_08730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08730 JAJSBG010000037.1 tRNAscan-SE tRNA 155 227 . + . ID=rna-LVR01_08730;Parent=gene-LVR01_08730;anticodon=(pos:188..190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08730;product=tRNA-Lys JAJSBG010000037.1 tRNAscan-SE exon 155 227 . + . ID=exon-LVR01_08730-1;Parent=rna-LVR01_08730;anticodon=(pos:188..190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08730;product=tRNA-Lys JAJSBG010000037.1 Genbank gene 233 314 . + . ID=gene-LVR01_08735;Name=LVR01_08735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08735 JAJSBG010000037.1 tRNAscan-SE tRNA 233 314 . + . ID=rna-LVR01_08735;Parent=gene-LVR01_08735;anticodon=(pos:267..269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08735;product=tRNA-Leu JAJSBG010000037.1 tRNAscan-SE exon 233 314 . + . ID=exon-LVR01_08735-1;Parent=rna-LVR01_08735;anticodon=(pos:267..269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08735;product=tRNA-Leu JAJSBG010000037.1 Genbank gene 333 405 . + . ID=gene-LVR01_08740;Name=LVR01_08740;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08740 JAJSBG010000037.1 tRNAscan-SE tRNA 333 405 . + . ID=rna-LVR01_08740;Parent=gene-LVR01_08740;anticodon=(pos:366..368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08740;product=tRNA-Thr JAJSBG010000037.1 tRNAscan-SE exon 333 405 . + . ID=exon-LVR01_08740-1;Parent=rna-LVR01_08740;anticodon=(pos:366..368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08740;product=tRNA-Thr JAJSBG010000037.1 Genbank gene 428 499 . + . ID=gene-LVR01_08745;Name=LVR01_08745;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08745 JAJSBG010000037.1 tRNAscan-SE tRNA 428 499 . + . ID=rna-LVR01_08745;Parent=gene-LVR01_08745;anticodon=(pos:460..462);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08745;product=tRNA-Gly JAJSBG010000037.1 tRNAscan-SE exon 428 499 . + . ID=exon-LVR01_08745-1;Parent=rna-LVR01_08745;anticodon=(pos:460..462);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08745;product=tRNA-Gly JAJSBG010000037.1 Genbank gene 507 592 . + . ID=gene-LVR01_08750;Name=LVR01_08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08750 JAJSBG010000037.1 tRNAscan-SE tRNA 507 592 . + . ID=rna-LVR01_08750;Parent=gene-LVR01_08750;anticodon=(pos:541..543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08750;product=tRNA-Leu JAJSBG010000037.1 tRNAscan-SE exon 507 592 . + . ID=exon-LVR01_08750-1;Parent=rna-LVR01_08750;anticodon=(pos:541..543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08750;product=tRNA-Leu JAJSBG010000037.1 Genbank gene 604 677 . + . ID=gene-LVR01_08755;Name=LVR01_08755;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08755 JAJSBG010000037.1 tRNAscan-SE tRNA 604 677 . + . ID=rna-LVR01_08755;Parent=gene-LVR01_08755;anticodon=(pos:638..640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08755;product=tRNA-Arg JAJSBG010000037.1 tRNAscan-SE exon 604 677 . + . ID=exon-LVR01_08755-1;Parent=rna-LVR01_08755;anticodon=(pos:638..640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08755;product=tRNA-Arg JAJSBG010000037.1 Genbank gene 693 766 . + . ID=gene-LVR01_08760;Name=LVR01_08760;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08760 JAJSBG010000037.1 tRNAscan-SE tRNA 693 766 . + . ID=rna-LVR01_08760;Parent=gene-LVR01_08760;anticodon=(pos:727..729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08760;product=tRNA-Pro JAJSBG010000037.1 tRNAscan-SE exon 693 766 . + . ID=exon-LVR01_08760-1;Parent=rna-LVR01_08760;anticodon=(pos:727..729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08760;product=tRNA-Pro JAJSBG010000037.1 Genbank gene 1256 1462 . + . ID=gene-LVR01_08765;Name=LVR01_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08765 JAJSBG010000037.1 Protein Homology CDS 1256 1462 . + 0 ID=cds-MCE2619301.1;Parent=gene-LVR01_08765;Dbxref=NCBI_GP:MCE2619301.1;Name=MCE2619301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518601.1;locus_tag=LVR01_08765;product=hypothetical protein;protein_id=MCE2619301.1;transl_table=11 JAJSBG010000037.1 Genbank gene 1452 1652 . + . ID=gene-LVR01_08770;Name=LVR01_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08770 JAJSBG010000037.1 Protein Homology CDS 1452 1652 . + 0 ID=cds-MCE2619302.1;Parent=gene-LVR01_08770;Dbxref=NCBI_GP:MCE2619302.1;Name=MCE2619302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786138.1;locus_tag=LVR01_08770;product=hypothetical protein;protein_id=MCE2619302.1;transl_table=11 JAJSBG010000037.1 Genbank gene 1639 2523 . + . ID=gene-LVR01_08775;Name=LVR01_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08775 JAJSBG010000037.1 Protein Homology CDS 1639 2523 . + 0 ID=cds-MCE2619303.1;Parent=gene-LVR01_08775;Dbxref=NCBI_GP:MCE2619303.1;Name=MCE2619303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219360.1;locus_tag=LVR01_08775;product=ABC transporter ATP-binding protein;protein_id=MCE2619303.1;transl_table=11 JAJSBG010000037.1 Genbank gene 2525 3262 . + . ID=gene-LVR01_08780;Name=LVR01_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08780 JAJSBG010000037.1 Protein Homology CDS 2525 3262 . + 0 ID=cds-MCE2619304.1;Parent=gene-LVR01_08780;Dbxref=NCBI_GP:MCE2619304.1;Name=MCE2619304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249339.1;locus_tag=LVR01_08780;product=ABC transporter permease;protein_id=MCE2619304.1;transl_table=11 JAJSBG010000037.1 Genbank gene 3262 4359 . + . ID=gene-LVR01_08785;Name=LVR01_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08785 JAJSBG010000037.1 Protein Homology CDS 3262 4359 . + 0 ID=cds-MCE2619305.1;Parent=gene-LVR01_08785;Dbxref=NCBI_GP:MCE2619305.1;Name=MCE2619305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258104.1;locus_tag=LVR01_08785;product=sensor histidine kinase;protein_id=MCE2619305.1;transl_table=11 JAJSBG010000037.1 Genbank gene 4361 4960 . + . ID=gene-LVR01_08790;Name=LVR01_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08790 JAJSBG010000037.1 Protein Homology CDS 4361 4960 . + 0 ID=cds-MCE2619306.1;Parent=gene-LVR01_08790;Dbxref=NCBI_GP:MCE2619306.1;Name=MCE2619306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398984.1;locus_tag=LVR01_08790;product=response regulator transcription factor;protein_id=MCE2619306.1;transl_table=11 JAJSBG010000037.1 Genbank gene 5278 6288 . + . ID=gene-LVR01_08795;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=LVR01_08795 JAJSBG010000037.1 Protein Homology CDS 5278 6288 . + 0 ID=cds-MCE2619307.1;Parent=gene-LVR01_08795;Dbxref=NCBI_GP:MCE2619307.1;Name=MCE2619307.1;gbkey=CDS;gene=ccpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990602.1;locus_tag=LVR01_08795;product=catabolite control protein A;protein_id=MCE2619307.1;transl_table=11 JAJSBG010000037.1 Genbank gene 6460 6654 . + . ID=gene-LVR01_08800;Name=LVR01_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08800 JAJSBG010000037.1 GeneMarkS-2+ CDS 6460 6654 . + 0 ID=cds-MCE2619308.1;Parent=gene-LVR01_08800;Dbxref=NCBI_GP:MCE2619308.1;Name=MCE2619308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08800;product=hypothetical protein;protein_id=MCE2619308.1;transl_table=11 JAJSBG010000037.1 Genbank gene 6683 7645 . - . ID=gene-LVR01_08805;Name=LVR01_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08805 JAJSBG010000037.1 Protein Homology CDS 6683 7645 . - 0 ID=cds-MCE2619309.1;Parent=gene-LVR01_08805;Dbxref=NCBI_GP:MCE2619309.1;Name=MCE2619309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522433.1;locus_tag=LVR01_08805;product=asparaginase;protein_id=MCE2619309.1;transl_table=11 JAJSBG010000037.1 Genbank gene 7711 9102 . + . ID=gene-LVR01_08810;Name=LVR01_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08810 JAJSBG010000037.1 Protein Homology CDS 7711 9102 . + 0 ID=cds-MCE2619310.1;Parent=gene-LVR01_08810;Dbxref=NCBI_GP:MCE2619310.1;Name=MCE2619310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452107.1;locus_tag=LVR01_08810;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2619310.1;transl_table=11 JAJSBG010000037.1 Genbank gene 9294 9746 . - . ID=gene-LVR01_08815;Name=LVR01_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08815 JAJSBG010000037.1 Protein Homology CDS 9294 9746 . - 0 ID=cds-MCE2619311.1;Parent=gene-LVR01_08815;Dbxref=NCBI_GP:MCE2619311.1;Name=MCE2619311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079155.1;locus_tag=LVR01_08815;product=universal stress protein;protein_id=MCE2619311.1;transl_table=11 JAJSBG010000037.1 Genbank gene 9918 10217 . + . ID=gene-LVR01_08820;Name=LVR01_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08820 JAJSBG010000037.1 Protein Homology CDS 9918 10217 . + 0 ID=cds-MCE2619312.1;Parent=gene-LVR01_08820;Dbxref=NCBI_GP:MCE2619312.1;Name=MCE2619312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809317.1;locus_tag=LVR01_08820;product=hypothetical protein;protein_id=MCE2619312.1;transl_table=11 JAJSBG010000037.1 Genbank gene 10238 10795 . + . ID=gene-LVR01_08825;Name=LVR01_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08825 JAJSBG010000037.1 Protein Homology CDS 10238 10795 . + 0 ID=cds-MCE2619313.1;Parent=gene-LVR01_08825;Dbxref=NCBI_GP:MCE2619313.1;Name=MCE2619313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203814.1;locus_tag=LVR01_08825;product=hypothetical protein;protein_id=MCE2619313.1;transl_table=11 JAJSBG010000037.1 Genbank gene 10939 12153 . + . ID=gene-LVR01_08830;Name=LVR01_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08830 JAJSBG010000037.1 Protein Homology CDS 10939 12153 . + 0 ID=cds-MCE2619314.1;Parent=gene-LVR01_08830;Dbxref=NCBI_GP:MCE2619314.1;Name=MCE2619314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836593.1;locus_tag=LVR01_08830;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCE2619314.1;transl_table=11 JAJSBG010000037.1 Genbank gene 12298 12432 . + . ID=gene-LVR01_08835;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LVR01_08835 JAJSBG010000037.1 Protein Homology CDS 12298 12432 . + 0 ID=cds-MCE2619315.1;Parent=gene-LVR01_08835;Dbxref=NCBI_GP:MCE2619315.1;Name=MCE2619315.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=LVR01_08835;product=50S ribosomal protein L34;protein_id=MCE2619315.1;transl_table=11 JAJSBG010000037.1 Genbank gene 13233 17304 . + . ID=gene-LVR01_08840;Name=LVR01_08840;end_range=17304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08840;partial=true JAJSBG010000037.1 Protein Homology CDS 13233 17304 . + 0 ID=cds-MCE2619316.1;Parent=gene-LVR01_08840;Dbxref=NCBI_GP:MCE2619316.1;Name=MCE2619316.1;end_range=17304,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020018.2;locus_tag=LVR01_08840;partial=true;product=YPDG domain-containing protein;protein_id=MCE2619316.1;transl_table=11 ##sequence-region JAJSBG010000038.1 1 16858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000038.1 Genbank region 1 16858 . + . ID=JAJSBG010000038.1:1..16858;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000038.1 Genbank pseudogene 74 213 . - . ID=gene-LVR01_08845;Name=LVR01_08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08845;pseudo=true JAJSBG010000038.1 Protein Homology CDS 74 213 . - 0 ID=cds-LVR01_08845;Parent=gene-LVR01_08845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_08845;product=IS630 transposase-related protein;pseudo=true;transl_table=11 JAJSBG010000038.1 Genbank pseudogene 344 1142 . + . ID=gene-LVR01_08850;Name=LVR01_08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08850;pseudo=true JAJSBG010000038.1 Protein Homology CDS 344 1142 . + 0 ID=cds-LVR01_08850;Parent=gene-LVR01_08850;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_08850;product=IS5 family transposase;pseudo=true;transl_table=11 JAJSBG010000038.1 Genbank gene 1288 2163 . - . ID=gene-LVR01_08855;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=LVR01_08855 JAJSBG010000038.1 Protein Homology CDS 1288 2163 . - 0 ID=cds-MCE2619317.1;Parent=gene-LVR01_08855;Dbxref=NCBI_GP:MCE2619317.1;Name=MCE2619317.1;gbkey=CDS;gene=aguB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246759.1;locus_tag=LVR01_08855;product=N-carbamoylputrescine amidase;protein_id=MCE2619317.1;transl_table=11 JAJSBG010000038.1 Genbank gene 2173 3258 . - . ID=gene-LVR01_08860;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=LVR01_08860 JAJSBG010000038.1 Protein Homology CDS 2173 3258 . - 0 ID=cds-MCE2619318.1;Parent=gene-LVR01_08860;Dbxref=NCBI_GP:MCE2619318.1;Name=MCE2619318.1;gbkey=CDS;gene=aguA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397151.1;locus_tag=LVR01_08860;product=agmatine deiminase;protein_id=MCE2619318.1;transl_table=11 JAJSBG010000038.1 Genbank gene 3255 4382 . - . ID=gene-LVR01_08865;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=LVR01_08865 JAJSBG010000038.1 Protein Homology CDS 3255 4382 . - 0 ID=cds-MCE2619319.1;Parent=gene-LVR01_08865;Dbxref=NCBI_GP:MCE2619319.1;Name=MCE2619319.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864914.1;locus_tag=LVR01_08865;product=carboxynorspermidine decarboxylase;protein_id=MCE2619319.1;transl_table=11 JAJSBG010000038.1 Genbank gene 4382 5641 . - . ID=gene-LVR01_08870;Name=LVR01_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08870 JAJSBG010000038.1 Protein Homology CDS 4382 5641 . - 0 ID=cds-MCE2619320.1;Parent=gene-LVR01_08870;Dbxref=NCBI_GP:MCE2619320.1;Name=MCE2619320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088792.1;locus_tag=LVR01_08870;product=saccharopine dehydrogenase family protein;protein_id=MCE2619320.1;transl_table=11 JAJSBG010000038.1 Genbank gene 5638 6498 . - . ID=gene-LVR01_08875;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LVR01_08875 JAJSBG010000038.1 Protein Homology CDS 5638 6498 . - 0 ID=cds-MCE2619321.1;Parent=gene-LVR01_08875;Dbxref=NCBI_GP:MCE2619321.1;Name=MCE2619321.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399314.1;locus_tag=LVR01_08875;product=polyamine aminopropyltransferase;protein_id=MCE2619321.1;transl_table=11 JAJSBG010000038.1 Genbank gene 6499 7959 . - . ID=gene-LVR01_08880;Name=LVR01_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08880 JAJSBG010000038.1 Protein Homology CDS 6499 7959 . - 0 ID=cds-MCE2619322.1;Parent=gene-LVR01_08880;Dbxref=NCBI_GP:MCE2619322.1;Name=MCE2619322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732143.1;locus_tag=LVR01_08880;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MCE2619322.1;transl_table=11 JAJSBG010000038.1 Genbank gene 8669 9364 . + . ID=gene-LVR01_08885;Name=LVR01_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08885 JAJSBG010000038.1 Protein Homology CDS 8669 9364 . + 0 ID=cds-MCE2619323.1;Parent=gene-LVR01_08885;Dbxref=NCBI_GP:MCE2619323.1;Name=MCE2619323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005268.1;locus_tag=LVR01_08885;product=VIT family protein;protein_id=MCE2619323.1;transl_table=11 JAJSBG010000038.1 Genbank gene 9406 11394 . - . ID=gene-LVR01_08890;Name=LVR01_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08890 JAJSBG010000038.1 Protein Homology CDS 9406 11394 . - 0 ID=cds-MCE2619324.1;Parent=gene-LVR01_08890;Dbxref=NCBI_GP:MCE2619324.1;Name=MCE2619324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489335.1;locus_tag=LVR01_08890;product=ABC transporter permease;protein_id=MCE2619324.1;transl_table=11 JAJSBG010000038.1 Genbank gene 11396 12154 . - . ID=gene-LVR01_08895;Name=LVR01_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08895 JAJSBG010000038.1 Protein Homology CDS 11396 12154 . - 0 ID=cds-MCE2619325.1;Parent=gene-LVR01_08895;Dbxref=NCBI_GP:MCE2619325.1;Name=MCE2619325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173375.1;locus_tag=LVR01_08895;product=ABC transporter ATP-binding protein;protein_id=MCE2619325.1;transl_table=11 JAJSBG010000038.1 Genbank gene 12585 12782 . + . ID=gene-LVR01_08900;Name=LVR01_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08900 JAJSBG010000038.1 Protein Homology CDS 12585 12782 . + 0 ID=cds-MCE2619326.1;Parent=gene-LVR01_08900;Dbxref=NCBI_GP:MCE2619326.1;Name=MCE2619326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680771.1;locus_tag=LVR01_08900;product=hypothetical protein;protein_id=MCE2619326.1;transl_table=11 JAJSBG010000038.1 Genbank gene 12920 13192 . - . ID=gene-LVR01_08905;Name=LVR01_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08905 JAJSBG010000038.1 Protein Homology CDS 12920 13192 . - 0 ID=cds-MCE2619327.1;Parent=gene-LVR01_08905;Dbxref=NCBI_GP:MCE2619327.1;Name=MCE2619327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269704.1;locus_tag=LVR01_08905;product=PspC domain-containing protein;protein_id=MCE2619327.1;transl_table=11 JAJSBG010000038.1 Genbank gene 13251 13700 . - . ID=gene-LVR01_08910;Name=LVR01_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08910 JAJSBG010000038.1 Protein Homology CDS 13251 13700 . - 0 ID=cds-MCE2619328.1;Parent=gene-LVR01_08910;Dbxref=NCBI_GP:MCE2619328.1;Name=MCE2619328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778579.1;locus_tag=LVR01_08910;product=SprT family protein;protein_id=MCE2619328.1;transl_table=11 JAJSBG010000038.1 Genbank gene 13687 15816 . - . ID=gene-LVR01_08915;Name=LVR01_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08915 JAJSBG010000038.1 Protein Homology CDS 13687 15816 . - 0 ID=cds-MCE2619329.1;Parent=gene-LVR01_08915;Dbxref=NCBI_GP:MCE2619329.1;Name=MCE2619329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359105.1;locus_tag=LVR01_08915;product=RNA-binding transcriptional accessory protein;protein_id=MCE2619329.1;transl_table=11 JAJSBG010000038.1 Genbank pseudogene 15917 16395 . - . ID=gene-LVR01_08920;Name=LVR01_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_08920;pseudo=true JAJSBG010000038.1 Protein Homology CDS 15917 16395 . - 0 ID=cds-LVR01_08920;Parent=gene-LVR01_08920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809527.1;locus_tag=LVR01_08920;product=DUF1919 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000038.1 Genbank gene 16580 16858 . - . ID=gene-LVR01_08925;Name=LVR01_08925;end_range=16858,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08925;partial=true JAJSBG010000038.1 Protein Homology CDS 16580 16858 . - 0 ID=cds-MCE2619330.1;Parent=gene-LVR01_08925;Dbxref=NCBI_GP:MCE2619330.1;Name=MCE2619330.1;end_range=16858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152639374.1;locus_tag=LVR01_08925;partial=true;product=IS630 family transposase;protein_id=MCE2619330.1;transl_table=11 ##sequence-region JAJSBG010000039.1 1 16607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000039.1 Genbank region 1 16607 . + . ID=JAJSBG010000039.1:1..16607;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000039.1 Genbank gene 36 263 . - . ID=gene-LVR01_08930;Name=LVR01_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08930 JAJSBG010000039.1 GeneMarkS-2+ CDS 36 263 . - 0 ID=cds-MCE2619331.1;Parent=gene-LVR01_08930;Dbxref=NCBI_GP:MCE2619331.1;Name=MCE2619331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_08930;product=hypothetical protein;protein_id=MCE2619331.1;transl_table=11 JAJSBG010000039.1 Genbank gene 390 764 . - . ID=gene-LVR01_08935;Name=LVR01_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08935 JAJSBG010000039.1 Protein Homology CDS 390 764 . - 0 ID=cds-MCE2619332.1;Parent=gene-LVR01_08935;Dbxref=NCBI_GP:MCE2619332.1;Name=MCE2619332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257560.1;locus_tag=LVR01_08935;product=DUF86 domain-containing protein;protein_id=MCE2619332.1;transl_table=11 JAJSBG010000039.1 Genbank gene 745 1059 . - . ID=gene-LVR01_08940;Name=LVR01_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08940 JAJSBG010000039.1 Protein Homology CDS 745 1059 . - 0 ID=cds-MCE2619333.1;Parent=gene-LVR01_08940;Dbxref=NCBI_GP:MCE2619333.1;Name=MCE2619333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263131.1;locus_tag=LVR01_08940;product=nucleotidyltransferase domain-containing protein;protein_id=MCE2619333.1;transl_table=11 JAJSBG010000039.1 Genbank gene 1105 1266 . - . ID=gene-LVR01_08945;Name=LVR01_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08945 JAJSBG010000039.1 Protein Homology CDS 1105 1266 . - 0 ID=cds-MCE2619334.1;Parent=gene-LVR01_08945;Dbxref=NCBI_GP:MCE2619334.1;Name=MCE2619334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077978.1;locus_tag=LVR01_08945;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MCE2619334.1;transl_table=11 JAJSBG010000039.1 Genbank gene 1356 1733 . - . ID=gene-LVR01_08950;Name=LVR01_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08950 JAJSBG010000039.1 Protein Homology CDS 1356 1733 . - 0 ID=cds-MCE2619335.1;Parent=gene-LVR01_08950;Dbxref=NCBI_GP:MCE2619335.1;Name=MCE2619335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002282907.1;locus_tag=LVR01_08950;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MCE2619335.1;transl_table=11 JAJSBG010000039.1 Genbank gene 1791 1979 . - . ID=gene-LVR01_08955;Name=LVR01_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08955 JAJSBG010000039.1 Protein Homology CDS 1791 1979 . - 0 ID=cds-MCE2619336.1;Parent=gene-LVR01_08955;Dbxref=NCBI_GP:MCE2619336.1;Name=MCE2619336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131504.1;locus_tag=LVR01_08955;product=type II toxin-antitoxin system HicA family toxin;protein_id=MCE2619336.1;transl_table=11 JAJSBG010000039.1 Genbank gene 2252 2323 . - . ID=gene-LVR01_08960;Name=LVR01_08960;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_08960 JAJSBG010000039.1 tRNAscan-SE tRNA 2252 2323 . - . ID=rna-LVR01_08960;Parent=gene-LVR01_08960;anticodon=(pos:complement(2288..2290));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08960;product=tRNA-Arg JAJSBG010000039.1 tRNAscan-SE exon 2252 2323 . - . ID=exon-LVR01_08960-1;Parent=rna-LVR01_08960;anticodon=(pos:complement(2288..2290));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_08960;product=tRNA-Arg JAJSBG010000039.1 Genbank gene 2364 2711 . - . ID=gene-LVR01_08965;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LVR01_08965 JAJSBG010000039.1 Protein Homology CDS 2364 2711 . - 0 ID=cds-MCE2619337.1;Parent=gene-LVR01_08965;Dbxref=NCBI_GP:MCE2619337.1;Name=MCE2619337.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=LVR01_08965;product=50S ribosomal protein L19;protein_id=MCE2619337.1;transl_table=11 JAJSBG010000039.1 Genbank gene 2830 3159 . - . ID=gene-LVR01_08970;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LVR01_08970 JAJSBG010000039.1 Protein Homology CDS 2830 3159 . - 0 ID=cds-MCE2619338.1;Parent=gene-LVR01_08970;Dbxref=NCBI_GP:MCE2619338.1;Name=MCE2619338.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237393.1;locus_tag=LVR01_08970;product=fluoride efflux transporter CrcB;protein_id=MCE2619338.1;transl_table=11 JAJSBG010000039.1 Genbank gene 3153 3527 . - . ID=gene-LVR01_08975;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LVR01_08975 JAJSBG010000039.1 Protein Homology CDS 3153 3527 . - 0 ID=cds-MCE2619339.1;Parent=gene-LVR01_08975;Dbxref=NCBI_GP:MCE2619339.1;Name=MCE2619339.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712114.1;locus_tag=LVR01_08975;product=fluoride efflux transporter CrcB;protein_id=MCE2619339.1;transl_table=11 JAJSBG010000039.1 Genbank gene 3524 3790 . - . ID=gene-LVR01_08980;Name=LVR01_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08980 JAJSBG010000039.1 Protein Homology CDS 3524 3790 . - 0 ID=cds-MCE2619340.1;Parent=gene-LVR01_08980;Dbxref=NCBI_GP:MCE2619340.1;Name=MCE2619340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398165.1;locus_tag=LVR01_08980;product=chorismate mutase;protein_id=MCE2619340.1;transl_table=11 JAJSBG010000039.1 Genbank gene 3906 4349 . - . ID=gene-LVR01_08985;Name=LVR01_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08985 JAJSBG010000039.1 Protein Homology CDS 3906 4349 . - 0 ID=cds-MCE2619341.1;Parent=gene-LVR01_08985;Dbxref=NCBI_GP:MCE2619341.1;Name=MCE2619341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465724.1;locus_tag=LVR01_08985;product=flavodoxin;protein_id=MCE2619341.1;transl_table=11 JAJSBG010000039.1 Genbank gene 4453 5388 . + . ID=gene-LVR01_08990;Name=LVR01_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08990 JAJSBG010000039.1 Protein Homology CDS 4453 5388 . + 0 ID=cds-MCE2619342.1;Parent=gene-LVR01_08990;Dbxref=NCBI_GP:MCE2619342.1;Name=MCE2619342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862804.1;locus_tag=LVR01_08990;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=MCE2619342.1;transl_table=11 JAJSBG010000039.1 Genbank gene 5442 5726 . + . ID=gene-LVR01_08995;Name=LVR01_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_08995 JAJSBG010000039.1 Protein Homology CDS 5442 5726 . + 0 ID=cds-MCE2619343.1;Parent=gene-LVR01_08995;Dbxref=NCBI_GP:MCE2619343.1;Name=MCE2619343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808933.1;locus_tag=LVR01_08995;product=type B 50S ribosomal protein L31;protein_id=MCE2619343.1;transl_table=11 JAJSBG010000039.1 Genbank gene 5904 6188 . + . ID=gene-LVR01_09000;Name=LVR01_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09000 JAJSBG010000039.1 Protein Homology CDS 5904 6188 . + 0 ID=cds-MCE2619344.1;Parent=gene-LVR01_09000;Dbxref=NCBI_GP:MCE2619344.1;Name=MCE2619344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213591.1;locus_tag=LVR01_09000;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MCE2619344.1;transl_table=11 JAJSBG010000039.1 Genbank gene 6178 6537 . + . ID=gene-LVR01_09005;Name=LVR01_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09005 JAJSBG010000039.1 Protein Homology CDS 6178 6537 . + 0 ID=cds-MCE2619345.1;Parent=gene-LVR01_09005;Dbxref=NCBI_GP:MCE2619345.1;Name=MCE2619345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221464.1;locus_tag=LVR01_09005;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCE2619345.1;transl_table=11 JAJSBG010000039.1 Genbank gene 6673 6843 . - . ID=gene-LVR01_09010;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LVR01_09010 JAJSBG010000039.1 Protein Homology CDS 6673 6843 . - 0 ID=cds-MCE2619346.1;Parent=gene-LVR01_09010;Dbxref=NCBI_GP:MCE2619346.1;Name=MCE2619346.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000512112.1;locus_tag=LVR01_09010;product=twin-arginine translocase TatA/TatE family subunit;protein_id=MCE2619346.1;transl_table=11 JAJSBG010000039.1 Genbank gene 6827 7558 . - . ID=gene-LVR01_09015;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LVR01_09015 JAJSBG010000039.1 Protein Homology CDS 6827 7558 . - 0 ID=cds-MCE2619347.1;Parent=gene-LVR01_09015;Dbxref=NCBI_GP:MCE2619347.1;Name=MCE2619347.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375156.1;locus_tag=LVR01_09015;product=twin-arginine translocase subunit TatC;protein_id=MCE2619347.1;transl_table=11 JAJSBG010000039.1 Genbank gene 7559 9247 . - . ID=gene-LVR01_09020;Name=LVR01_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09020 JAJSBG010000039.1 Protein Homology CDS 7559 9247 . - 0 ID=cds-MCE2619348.1;Parent=gene-LVR01_09020;Dbxref=NCBI_GP:MCE2619348.1;Name=MCE2619348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252110.1;locus_tag=LVR01_09020;product=FTR1 family protein;protein_id=MCE2619348.1;transl_table=11 JAJSBG010000039.1 Genbank gene 9222 10436 . - . ID=gene-LVR01_09025;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=LVR01_09025 JAJSBG010000039.1 Protein Homology CDS 9222 10436 . - 0 ID=cds-MCE2619349.1;Parent=gene-LVR01_09025;Dbxref=NCBI_GP:MCE2619349.1;Name=MCE2619349.1;gbkey=CDS;gene=efeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259617.1;locus_tag=LVR01_09025;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=MCE2619349.1;transl_table=11 JAJSBG010000039.1 Genbank gene 10442 11314 . - . ID=gene-LVR01_09030;Name=LVR01_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09030 JAJSBG010000039.1 Protein Homology CDS 10442 11314 . - 0 ID=cds-MCE2619350.1;Parent=gene-LVR01_09030;Dbxref=NCBI_GP:MCE2619350.1;Name=MCE2619350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660262.1;locus_tag=LVR01_09030;product=EfeM/EfeO family lipoprotein;protein_id=MCE2619350.1;transl_table=11 JAJSBG010000039.1 Genbank gene 11422 11781 . - . ID=gene-LVR01_09035;Name=LVR01_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09035 JAJSBG010000039.1 Protein Homology CDS 11422 11781 . - 0 ID=cds-MCE2619351.1;Parent=gene-LVR01_09035;Dbxref=NCBI_GP:MCE2619351.1;Name=MCE2619351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284914.1;locus_tag=LVR01_09035;product=hypothetical protein;protein_id=MCE2619351.1;transl_table=11 JAJSBG010000039.1 Genbank gene 12076 12981 . + . ID=gene-LVR01_09040;Name=LVR01_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09040 JAJSBG010000039.1 Protein Homology CDS 12076 12981 . + 0 ID=cds-MCE2619352.1;Parent=gene-LVR01_09040;Dbxref=NCBI_GP:MCE2619352.1;Name=MCE2619352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398535.1;locus_tag=LVR01_09040;product=permease;protein_id=MCE2619352.1;transl_table=11 JAJSBG010000039.1 Genbank gene 12978 13793 . + . ID=gene-LVR01_09045;Name=LVR01_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09045 JAJSBG010000039.1 Protein Homology CDS 12978 13793 . + 0 ID=cds-MCE2619353.1;Parent=gene-LVR01_09045;Dbxref=NCBI_GP:MCE2619353.1;Name=MCE2619353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617844.1;locus_tag=LVR01_09045;product=TIGR03943 family protein;protein_id=MCE2619353.1;transl_table=11 JAJSBG010000039.1 Genbank gene 13923 14639 . - . ID=gene-LVR01_09050;Name=LVR01_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09050 JAJSBG010000039.1 Protein Homology CDS 13923 14639 . - 0 ID=cds-MCE2619354.1;Parent=gene-LVR01_09050;Dbxref=NCBI_GP:MCE2619354.1;Name=MCE2619354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759787.1;locus_tag=LVR01_09050;product=alpha/beta hydrolase;protein_id=MCE2619354.1;transl_table=11 JAJSBG010000039.1 Genbank gene 14643 14954 . - . ID=gene-LVR01_09055;Name=LVR01_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09055 JAJSBG010000039.1 Protein Homology CDS 14643 14954 . - 0 ID=cds-MCE2619355.1;Parent=gene-LVR01_09055;Dbxref=NCBI_GP:MCE2619355.1;Name=MCE2619355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521917.1;locus_tag=LVR01_09055;product=hypothetical protein;protein_id=MCE2619355.1;transl_table=11 JAJSBG010000039.1 Genbank gene 15067 15246 . - . ID=gene-LVR01_09060;Name=LVR01_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09060 JAJSBG010000039.1 Protein Homology CDS 15067 15246 . - 0 ID=cds-MCE2619356.1;Parent=gene-LVR01_09060;Dbxref=NCBI_GP:MCE2619356.1;Name=MCE2619356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859476.1;locus_tag=LVR01_09060;product=hypothetical protein;protein_id=MCE2619356.1;transl_table=11 JAJSBG010000039.1 Genbank gene 15259 16131 . - . ID=gene-LVR01_09065;Name=LVR01_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09065 JAJSBG010000039.1 Protein Homology CDS 15259 16131 . - 0 ID=cds-MCE2619357.1;Parent=gene-LVR01_09065;Dbxref=NCBI_GP:MCE2619357.1;Name=MCE2619357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749590.1;locus_tag=LVR01_09065;product=DUF4300 family protein;protein_id=MCE2619357.1;transl_table=11 ##sequence-region JAJSBG010000003.1 1 103338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000003.1 Genbank region 1 103338 . + . ID=JAJSBG010000003.1:1..103338;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000003.1 Genbank gene 1 344 . - . ID=gene-LVR01_01670;Name=LVR01_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01670;partial=true;start_range=.,1 JAJSBG010000003.1 Protein Homology CDS 1 344 . - 0 ID=cds-MCE2618015.1;Parent=gene-LVR01_01670;Dbxref=NCBI_GP:MCE2618015.1;Name=MCE2618015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398897.1;locus_tag=LVR01_01670;partial=true;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MCE2618015.1;start_range=.,1;transl_table=11 JAJSBG010000003.1 Genbank gene 451 1038 . - . ID=gene-LVR01_01675;Name=LVR01_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01675 JAJSBG010000003.1 Protein Homology CDS 451 1038 . - 0 ID=cds-MCE2618016.1;Parent=gene-LVR01_01675;Dbxref=NCBI_GP:MCE2618016.1;Name=MCE2618016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001824133.1;locus_tag=LVR01_01675;product=peptidase M50;protein_id=MCE2618016.1;transl_table=11 JAJSBG010000003.1 Genbank gene 1744 2964 . - . ID=gene-LVR01_01680;Name=LVR01_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01680 JAJSBG010000003.1 Protein Homology CDS 1744 2964 . - 0 ID=cds-MCE2618017.1;Parent=gene-LVR01_01680;Dbxref=NCBI_GP:MCE2618017.1;Name=MCE2618017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031166.1;locus_tag=LVR01_01680;product=cell division protein FtsQ/DivIB;protein_id=MCE2618017.1;transl_table=11 JAJSBG010000003.1 Genbank gene 2974 4032 . - . ID=gene-LVR01_01685;Name=LVR01_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01685 JAJSBG010000003.1 Protein Homology CDS 2974 4032 . - 0 ID=cds-MCE2618018.1;Parent=gene-LVR01_01685;Dbxref=NCBI_GP:MCE2618018.1;Name=MCE2618018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724845.1;locus_tag=LVR01_01685;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=MCE2618018.1;transl_table=11 JAJSBG010000003.1 Genbank gene 4034 5386 . - . ID=gene-LVR01_01690;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LVR01_01690 JAJSBG010000003.1 Protein Homology CDS 4034 5386 . - 0 ID=cds-MCE2618019.1;Parent=gene-LVR01_01690;Dbxref=NCBI_GP:MCE2618019.1;Name=MCE2618019.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862950.1;locus_tag=LVR01_01690;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=MCE2618019.1;transl_table=11 JAJSBG010000003.1 Genbank gene 5595 6236 . - . ID=gene-LVR01_01695;Name=LVR01_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01695 JAJSBG010000003.1 Protein Homology CDS 5595 6236 . - 0 ID=cds-MCE2618020.1;Parent=gene-LVR01_01695;Dbxref=NCBI_GP:MCE2618020.1;Name=MCE2618020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571297.1;locus_tag=LVR01_01695;product=ABC transporter ATP-binding protein;protein_id=MCE2618020.1;transl_table=11 JAJSBG010000003.1 Genbank gene 6238 8259 . - . ID=gene-LVR01_01700;Name=LVR01_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01700 JAJSBG010000003.1 Protein Homology CDS 6238 8259 . - 0 ID=cds-MCE2618021.1;Parent=gene-LVR01_01700;Dbxref=NCBI_GP:MCE2618021.1;Name=MCE2618021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732428.1;locus_tag=LVR01_01700;product=bacteriocin-associated integral membrane family protein;protein_id=MCE2618021.1;transl_table=11 JAJSBG010000003.1 Genbank gene 8330 8629 . - . ID=gene-LVR01_01705;Name=LVR01_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01705 JAJSBG010000003.1 Protein Homology CDS 8330 8629 . - 0 ID=cds-MCE2618022.1;Parent=gene-LVR01_01705;Dbxref=NCBI_GP:MCE2618022.1;Name=MCE2618022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397967.1;locus_tag=LVR01_01705;product=lactococcin 972 family bacteriocin;protein_id=MCE2618022.1;transl_table=11 JAJSBG010000003.1 Genbank gene 9020 9274 . - . ID=gene-LVR01_01710;Name=LVR01_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01710 JAJSBG010000003.1 Protein Homology CDS 9020 9274 . - 0 ID=cds-MCE2618023.1;Parent=gene-LVR01_01710;Dbxref=NCBI_GP:MCE2618023.1;Name=MCE2618023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262800.1;locus_tag=LVR01_01710;product=DUF3165 family protein;protein_id=MCE2618023.1;transl_table=11 JAJSBG010000003.1 Genbank gene 9294 11135 . - . ID=gene-LVR01_01715;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LVR01_01715 JAJSBG010000003.1 Protein Homology CDS 9294 11135 . - 0 ID=cds-MCE2618024.1;Parent=gene-LVR01_01715;Dbxref=NCBI_GP:MCE2618024.1;Name=MCE2618024.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078415.1;locus_tag=LVR01_01715;product=translational GTPase TypA;protein_id=MCE2618024.1;transl_table=11 JAJSBG010000003.1 Genbank gene 11295 12020 . + . ID=gene-LVR01_01720;Name=LVR01_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01720 JAJSBG010000003.1 Protein Homology CDS 11295 12020 . + 0 ID=cds-MCE2618025.1;Parent=gene-LVR01_01720;Dbxref=NCBI_GP:MCE2618025.1;Name=MCE2618025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235004.1;locus_tag=LVR01_01720;product=rRNA pseudouridine synthase;protein_id=MCE2618025.1;transl_table=11 JAJSBG010000003.1 Genbank gene 12062 12295 . - . ID=gene-LVR01_01725;Name=LVR01_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01725 JAJSBG010000003.1 Protein Homology CDS 12062 12295 . - 0 ID=cds-MCE2618026.1;Parent=gene-LVR01_01725;Dbxref=NCBI_GP:MCE2618026.1;Name=MCE2618026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088017.1;locus_tag=LVR01_01725;product=DUF4190 domain-containing protein;protein_id=MCE2618026.1;transl_table=11 JAJSBG010000003.1 Genbank gene 12382 12762 . - . ID=gene-LVR01_01730;Name=LVR01_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01730 JAJSBG010000003.1 Protein Homology CDS 12382 12762 . - 0 ID=cds-MCE2618027.1;Parent=gene-LVR01_01730;Dbxref=NCBI_GP:MCE2618027.1;Name=MCE2618027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520409.1;locus_tag=LVR01_01730;product=rhodanese-like domain-containing protein;protein_id=MCE2618027.1;transl_table=11 JAJSBG010000003.1 Genbank gene 12762 13031 . - . ID=gene-LVR01_01735;Name=LVR01_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01735 JAJSBG010000003.1 Protein Homology CDS 12762 13031 . - 0 ID=cds-MCE2618028.1;Parent=gene-LVR01_01735;Dbxref=NCBI_GP:MCE2618028.1;Name=MCE2618028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051789.1;locus_tag=LVR01_01735;product=YqgQ family protein;protein_id=MCE2618028.1;transl_table=11 JAJSBG010000003.1 Genbank gene 13095 14003 . + . ID=gene-LVR01_01740;Name=LVR01_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01740 JAJSBG010000003.1 Protein Homology CDS 13095 14003 . + 0 ID=cds-MCE2618029.1;Parent=gene-LVR01_01740;Dbxref=NCBI_GP:MCE2618029.1;Name=MCE2618029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520411.1;locus_tag=LVR01_01740;product=LysR family transcriptional regulator;protein_id=MCE2618029.1;transl_table=11 JAJSBG010000003.1 Genbank gene 14057 14812 . - . ID=gene-LVR01_01745;Name=LVR01_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01745 JAJSBG010000003.1 Protein Homology CDS 14057 14812 . - 0 ID=cds-MCE2618030.1;Parent=gene-LVR01_01745;Dbxref=NCBI_GP:MCE2618030.1;Name=MCE2618030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142149.1;locus_tag=LVR01_01745;product=SDR family oxidoreductase;protein_id=MCE2618030.1;transl_table=11 JAJSBG010000003.1 Genbank gene 14833 15762 . - . ID=gene-LVR01_01750;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LVR01_01750 JAJSBG010000003.1 Protein Homology CDS 14833 15762 . - 0 ID=cds-MCE2618031.1;Parent=gene-LVR01_01750;Dbxref=NCBI_GP:MCE2618031.1;Name=MCE2618031.1;gbkey=CDS;gene=rnz;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354350.1;locus_tag=LVR01_01750;product=ribonuclease Z;protein_id=MCE2618031.1;transl_table=11 JAJSBG010000003.1 Genbank gene 15777 16400 . - . ID=gene-LVR01_01755;Name=LVR01_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01755 JAJSBG010000003.1 Protein Homology CDS 15777 16400 . - 0 ID=cds-MCE2618032.1;Parent=gene-LVR01_01755;Dbxref=NCBI_GP:MCE2618032.1;Name=MCE2618032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863869.1;locus_tag=LVR01_01755;product=cystathionine beta-lyase;protein_id=MCE2618032.1;transl_table=11 JAJSBG010000003.1 Genbank gene 16393 17631 . - . ID=gene-LVR01_01760;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LVR01_01760 JAJSBG010000003.1 Protein Homology CDS 16393 17631 . - 0 ID=cds-MCE2618033.1;Parent=gene-LVR01_01760;Dbxref=NCBI_GP:MCE2618033.1;Name=MCE2618033.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573186.1;locus_tag=LVR01_01760;product=GTPase HflX;protein_id=MCE2618033.1;transl_table=11 JAJSBG010000003.1 Genbank gene 17624 18508 . - . ID=gene-LVR01_01765;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LVR01_01765 JAJSBG010000003.1 Protein Homology CDS 17624 18508 . - 0 ID=cds-MCE2618034.1;Parent=gene-LVR01_01765;Dbxref=NCBI_GP:MCE2618034.1;Name=MCE2618034.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850191.1;locus_tag=LVR01_01765;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MCE2618034.1;transl_table=11 JAJSBG010000003.1 Genbank gene 18629 18799 . + . ID=gene-LVR01_01770;Name=LVR01_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01770 JAJSBG010000003.1 Protein Homology CDS 18629 18799 . + 0 ID=cds-MCE2618035.1;Parent=gene-LVR01_01770;Dbxref=NCBI_GP:MCE2618035.1;Name=MCE2618035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051775.1;locus_tag=LVR01_01770;product=DUF3042 family protein;protein_id=MCE2618035.1;transl_table=11 JAJSBG010000003.1 Genbank gene 18858 18989 . + . ID=gene-LVR01_01775;Name=LVR01_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01775 JAJSBG010000003.1 Protein Homology CDS 18858 18989 . + 0 ID=cds-MCE2618036.1;Parent=gene-LVR01_01775;Dbxref=NCBI_GP:MCE2618036.1;Name=MCE2618036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_01775;product=chlorohydrolase;protein_id=MCE2618036.1;transl_table=11 JAJSBG010000003.1 Genbank gene 19013 19852 . - . ID=gene-LVR01_01780;Name=LVR01_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01780 JAJSBG010000003.1 Protein Homology CDS 19013 19852 . - 0 ID=cds-MCE2618037.1;Parent=gene-LVR01_01780;Dbxref=NCBI_GP:MCE2618037.1;Name=MCE2618037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011065.1;locus_tag=LVR01_01780;product=thymidylate synthase;protein_id=MCE2618037.1;transl_table=11 JAJSBG010000003.1 Genbank gene 19950 20909 . - . ID=gene-LVR01_01785;Name=LVR01_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01785 JAJSBG010000003.1 Protein Homology CDS 19950 20909 . - 0 ID=cds-MCE2618038.1;Parent=gene-LVR01_01785;Dbxref=NCBI_GP:MCE2618038.1;Name=MCE2618038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919069.1;locus_tag=LVR01_01785;product=ROK family glucokinase;protein_id=MCE2618038.1;transl_table=11 JAJSBG010000003.1 Genbank gene 21014 22330 . - . ID=gene-LVR01_01790;Name=LVR01_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01790 JAJSBG010000003.1 Protein Homology CDS 21014 22330 . - 0 ID=cds-MCE2618039.1;Parent=gene-LVR01_01790;Dbxref=NCBI_GP:MCE2618039.1;Name=MCE2618039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361341.1;locus_tag=LVR01_01790;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=MCE2618039.1;transl_table=11 JAJSBG010000003.1 Genbank gene 22380 22997 . - . ID=gene-LVR01_01795;Name=LVR01_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01795 JAJSBG010000003.1 Protein Homology CDS 22380 22997 . - 0 ID=cds-MCE2618040.1;Parent=gene-LVR01_01795;Dbxref=NCBI_GP:MCE2618040.1;Name=MCE2618040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766583.1;locus_tag=LVR01_01795;product=alpha/beta hydrolase;protein_id=MCE2618040.1;transl_table=11 JAJSBG010000003.1 Genbank gene 22998 24719 . - . ID=gene-LVR01_01800;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=LVR01_01800 JAJSBG010000003.1 Protein Homology CDS 22998 24719 . - 0 ID=cds-MCE2618041.1;Parent=gene-LVR01_01800;Dbxref=NCBI_GP:MCE2618041.1;Name=MCE2618041.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818774.1;locus_tag=LVR01_01800;product=aminodeoxychorismate synthase component I;protein_id=MCE2618041.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 24793 31940 . - . ID=gene-LVR01_01805;Name=LVR01_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01805;pseudo=true JAJSBG010000003.1 Protein Homology CDS 24793 31940 . - 0 ID=cds-LVR01_01805;Parent=gene-LVR01_01805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019216.2;locus_tag=LVR01_01805;product=G5 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 32037 32600 . - . ID=gene-LVR01_01810;Name=LVR01_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01810 JAJSBG010000003.1 Protein Homology CDS 32037 32600 . - 0 ID=cds-MCE2618042.1;Parent=gene-LVR01_01810;Dbxref=NCBI_GP:MCE2618042.1;Name=MCE2618042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014931902.1;locus_tag=LVR01_01810;product=TIGR01440 family protein;protein_id=MCE2618042.1;transl_table=11 JAJSBG010000003.1 Genbank gene 32715 34406 . - . ID=gene-LVR01_01815;Name=LVR01_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01815 JAJSBG010000003.1 Protein Homology CDS 32715 34406 . - 0 ID=cds-MCE2618043.1;Parent=gene-LVR01_01815;Dbxref=NCBI_GP:MCE2618043.1;Name=MCE2618043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831084.1;locus_tag=LVR01_01815;product=sensor histidine kinase;protein_id=MCE2618043.1;transl_table=11 JAJSBG010000003.1 Genbank gene 34403 35140 . - . ID=gene-LVR01_01820;Name=LVR01_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01820 JAJSBG010000003.1 Protein Homology CDS 34403 35140 . - 0 ID=cds-MCE2618044.1;Parent=gene-LVR01_01820;Dbxref=NCBI_GP:MCE2618044.1;Name=MCE2618044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864667.1;locus_tag=LVR01_01820;product=response regulator transcription factor;protein_id=MCE2618044.1;transl_table=11 JAJSBG010000003.1 Genbank gene 35478 36590 . - . ID=gene-LVR01_01825;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LVR01_01825 JAJSBG010000003.1 Protein Homology CDS 35478 36590 . - 0 ID=cds-MCE2618045.1;Parent=gene-LVR01_01825;Dbxref=NCBI_GP:MCE2618045.1;Name=MCE2618045.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730371.1;locus_tag=LVR01_01825;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=MCE2618045.1;transl_table=11 JAJSBG010000003.1 Genbank gene 36601 37167 . - . ID=gene-LVR01_01830;Name=LVR01_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01830 JAJSBG010000003.1 Protein Homology CDS 36601 37167 . - 0 ID=cds-MCE2618046.1;Parent=gene-LVR01_01830;Dbxref=NCBI_GP:MCE2618046.1;Name=MCE2618046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759281.1;locus_tag=LVR01_01830;product=redoxin family protein;protein_id=MCE2618046.1;transl_table=11 JAJSBG010000003.1 Genbank gene 37187 37897 . - . ID=gene-LVR01_01835;Name=ccdA2;gbkey=Gene;gene=ccdA2;gene_biotype=protein_coding;locus_tag=LVR01_01835 JAJSBG010000003.1 Protein Homology CDS 37187 37897 . - 0 ID=cds-MCE2618047.1;Parent=gene-LVR01_01835;Dbxref=NCBI_GP:MCE2618047.1;Name=MCE2618047.1;gbkey=CDS;gene=ccdA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509848.1;locus_tag=LVR01_01835;product=thiol-disulfide oxidoreductase-associated membrane protein CcdA2;protein_id=MCE2618047.1;transl_table=11 JAJSBG010000003.1 Genbank gene 38107 38967 . - . ID=gene-LVR01_01840;Name=LVR01_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01840 JAJSBG010000003.1 Protein Homology CDS 38107 38967 . - 0 ID=cds-MCE2618048.1;Parent=gene-LVR01_01840;Dbxref=NCBI_GP:MCE2618048.1;Name=MCE2618048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397995.1;locus_tag=LVR01_01840;product=YihY/virulence factor BrkB family protein;protein_id=MCE2618048.1;transl_table=11 JAJSBG010000003.1 Genbank gene 39146 41200 . - . ID=gene-LVR01_01845;Name=LVR01_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01845 JAJSBG010000003.1 Protein Homology CDS 39146 41200 . - 0 ID=cds-MCE2618049.1;Parent=gene-LVR01_01845;Dbxref=NCBI_GP:MCE2618049.1;Name=MCE2618049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421632.1;locus_tag=LVR01_01845;product=sodium:proton antiporter;protein_id=MCE2618049.1;transl_table=11 JAJSBG010000003.1 Genbank gene 41212 41466 . - . ID=gene-LVR01_01850;Name=LVR01_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01850 JAJSBG010000003.1 Protein Homology CDS 41212 41466 . - 0 ID=cds-MCE2618050.1;Parent=gene-LVR01_01850;Dbxref=NCBI_GP:MCE2618050.1;Name=MCE2618050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361102.1;locus_tag=LVR01_01850;product=hypothetical protein;protein_id=MCE2618050.1;transl_table=11 JAJSBG010000003.1 Genbank gene 41459 42016 . - . ID=gene-LVR01_01855;Name=LVR01_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01855 JAJSBG010000003.1 Protein Homology CDS 41459 42016 . - 0 ID=cds-MCE2618051.1;Parent=gene-LVR01_01855;Dbxref=NCBI_GP:MCE2618051.1;Name=MCE2618051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828405.1;locus_tag=LVR01_01855;product=class I SAM-dependent methyltransferase;protein_id=MCE2618051.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 42000 42956 . - . ID=gene-LVR01_01860;Name=LVR01_01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01860;pseudo=true JAJSBG010000003.1 Protein Homology CDS 42000 42956 . - 0 ID=cds-LVR01_01860;Parent=gene-LVR01_01860;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881980.1;locus_tag=LVR01_01860;product=TIGR01212 family radical SAM protein;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 43049 43408 . + . ID=gene-LVR01_01865;Name=LVR01_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01865 JAJSBG010000003.1 Protein Homology CDS 43049 43408 . + 0 ID=cds-MCE2618052.1;Parent=gene-LVR01_01865;Dbxref=NCBI_GP:MCE2618052.1;Name=MCE2618052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249826.1;locus_tag=LVR01_01865;product=DUF3397 domain-containing protein;protein_id=MCE2618052.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 43621 44619 . + . ID=gene-LVR01_01870;Name=LVR01_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01870;pseudo=true JAJSBG010000003.1 Protein Homology CDS 43621 44619 . + 0 ID=cds-LVR01_01870;Parent=gene-LVR01_01870;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125496.1;locus_tag=LVR01_01870;product=transposase;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 44867 51568 . - . ID=gene-LVR01_01875;Name=bgaA;gbkey=Gene;gene=bgaA;gene_biotype=protein_coding;locus_tag=LVR01_01875 JAJSBG010000003.1 Protein Homology CDS 44867 51568 . - 0 ID=cds-MCE2618053.1;Parent=gene-LVR01_01875;Dbxref=NCBI_GP:MCE2618053.1;Name=MCE2618053.1;gbkey=CDS;gene=bgaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000515226.1;locus_tag=LVR01_01875;product=LPXTG-anchored adhesin/beta-galactosidase BgaA;protein_id=MCE2618053.1;transl_table=11 JAJSBG010000003.1 Genbank gene 51656 51958 . - . ID=gene-LVR01_01880;Name=LVR01_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01880 JAJSBG010000003.1 GeneMarkS-2+ CDS 51656 51958 . - 0 ID=cds-MCE2618054.1;Parent=gene-LVR01_01880;Dbxref=NCBI_GP:MCE2618054.1;Name=MCE2618054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_01880;product=hypothetical protein;protein_id=MCE2618054.1;transl_table=11 JAJSBG010000003.1 Genbank gene 52059 53534 . - . ID=gene-LVR01_01885;Name=LVR01_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01885 JAJSBG010000003.1 Protein Homology CDS 52059 53534 . - 0 ID=cds-MCE2618055.1;Parent=gene-LVR01_01885;Dbxref=NCBI_GP:MCE2618055.1;Name=MCE2618055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338710.1;locus_tag=LVR01_01885;product=PTS galactitol transporter subunit IIC;protein_id=MCE2618055.1;transl_table=11 JAJSBG010000003.1 Genbank gene 53582 53887 . - . ID=gene-LVR01_01890;Name=LVR01_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01890 JAJSBG010000003.1 Protein Homology CDS 53582 53887 . - 0 ID=cds-MCE2618056.1;Parent=gene-LVR01_01890;Dbxref=NCBI_GP:MCE2618056.1;Name=MCE2618056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590575.1;locus_tag=LVR01_01890;product=PTS sugar transporter subunit IIB;protein_id=MCE2618056.1;transl_table=11 JAJSBG010000003.1 Genbank gene 53925 54401 . - . ID=gene-LVR01_01895;Name=LVR01_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01895 JAJSBG010000003.1 Protein Homology CDS 53925 54401 . - 0 ID=cds-MCE2618057.1;Parent=gene-LVR01_01895;Dbxref=NCBI_GP:MCE2618057.1;Name=MCE2618057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242196.1;locus_tag=LVR01_01895;product=PTS sugar transporter subunit IIA;protein_id=MCE2618057.1;transl_table=11 JAJSBG010000003.1 Genbank gene 54576 54749 . + . ID=gene-LVR01_01900;Name=LVR01_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01900 JAJSBG010000003.1 Protein Homology CDS 54576 54749 . + 0 ID=cds-MCE2618058.1;Parent=gene-LVR01_01900;Dbxref=NCBI_GP:MCE2618058.1;Name=MCE2618058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=LVR01_01900;product=hypothetical protein;protein_id=MCE2618058.1;transl_table=11 JAJSBG010000003.1 Genbank gene 54719 55027 . - . ID=gene-LVR01_01905;Name=LVR01_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01905 JAJSBG010000003.1 Protein Homology CDS 54719 55027 . - 0 ID=cds-MCE2618059.1;Parent=gene-LVR01_01905;Dbxref=NCBI_GP:MCE2618059.1;Name=MCE2618059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734650.1;locus_tag=LVR01_01905;product=hypothetical protein;protein_id=MCE2618059.1;transl_table=11 JAJSBG010000003.1 Genbank gene 55508 62074 . - . ID=gene-LVR01_01910;Name=LVR01_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01910 JAJSBG010000003.1 Protein Homology CDS 55508 62074 . - 0 ID=cds-MCE2618060.1;Parent=gene-LVR01_01910;Dbxref=NCBI_GP:MCE2618060.1;Name=MCE2618060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750025.1;locus_tag=LVR01_01910;product=S8 family serine peptidase;protein_id=MCE2618060.1;transl_table=11 JAJSBG010000003.1 Genbank gene 62652 63911 . - . ID=gene-LVR01_01915;Name=LVR01_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01915 JAJSBG010000003.1 Protein Homology CDS 62652 63911 . - 0 ID=cds-MCE2618061.1;Parent=gene-LVR01_01915;Dbxref=NCBI_GP:MCE2618061.1;Name=MCE2618061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=LVR01_01915;product=IS1380 family transposase;protein_id=MCE2618061.1;transl_table=11 JAJSBG010000003.1 Genbank gene 64282 65067 . - . ID=gene-LVR01_01920;Name=LVR01_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01920 JAJSBG010000003.1 Protein Homology CDS 64282 65067 . - 0 ID=cds-MCE2618062.1;Parent=gene-LVR01_01920;Dbxref=NCBI_GP:MCE2618062.1;Name=MCE2618062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010202.1;locus_tag=LVR01_01920;product=ABC transporter permease;protein_id=MCE2618062.1;transl_table=11 JAJSBG010000003.1 Genbank gene 65069 65887 . - . ID=gene-LVR01_01925;Name=LVR01_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01925 JAJSBG010000003.1 Protein Homology CDS 65069 65887 . - 0 ID=cds-MCE2618063.1;Parent=gene-LVR01_01925;Dbxref=NCBI_GP:MCE2618063.1;Name=MCE2618063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240175.1;locus_tag=LVR01_01925;product=ABC-2 family transporter protein;protein_id=MCE2618063.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 65889 66882 . - . ID=gene-LVR01_01930;Name=LVR01_01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_01930;pseudo=true JAJSBG010000003.1 Protein Homology CDS 65889 66882 . - 0 ID=cds-LVR01_01930;Parent=gene-LVR01_01930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371202.1;locus_tag=LVR01_01930;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 67927 68136 . - . ID=gene-LVR01_01935;Name=LVR01_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01935 JAJSBG010000003.1 Protein Homology CDS 67927 68136 . - 0 ID=cds-MCE2618064.1;Parent=gene-LVR01_01935;Dbxref=NCBI_GP:MCE2618064.1;Name=MCE2618064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812601.1;locus_tag=LVR01_01935;product=hypothetical protein;protein_id=MCE2618064.1;transl_table=11 JAJSBG010000003.1 Genbank gene 68302 68493 . + . ID=gene-LVR01_01940;Name=LVR01_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01940 JAJSBG010000003.1 Protein Homology CDS 68302 68493 . + 0 ID=cds-MCE2618065.1;Parent=gene-LVR01_01940;Dbxref=NCBI_GP:MCE2618065.1;Name=MCE2618065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397501.1;locus_tag=LVR01_01940;product=hypothetical protein;protein_id=MCE2618065.1;transl_table=11 JAJSBG010000003.1 Genbank gene 68595 69284 . - . ID=gene-LVR01_01945;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LVR01_01945 JAJSBG010000003.1 Protein Homology CDS 68595 69284 . - 0 ID=cds-MCE2618066.1;Parent=gene-LVR01_01945;Dbxref=NCBI_GP:MCE2618066.1;Name=MCE2618066.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=LVR01_01945;product=50S ribosomal protein L1;protein_id=MCE2618066.1;transl_table=11 JAJSBG010000003.1 Genbank gene 69492 69917 . - . ID=gene-LVR01_01950;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LVR01_01950 JAJSBG010000003.1 Protein Homology CDS 69492 69917 . - 0 ID=cds-MCE2618067.1;Parent=gene-LVR01_01950;Dbxref=NCBI_GP:MCE2618067.1;Name=MCE2618067.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226069.1;locus_tag=LVR01_01950;product=50S ribosomal protein L11;protein_id=MCE2618067.1;transl_table=11 JAJSBG010000003.1 Genbank gene 70040 70756 . - . ID=gene-LVR01_01955;Name=LVR01_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01955 JAJSBG010000003.1 Protein Homology CDS 70040 70756 . - 0 ID=cds-MCE2618068.1;Parent=gene-LVR01_01955;Dbxref=NCBI_GP:MCE2618068.1;Name=MCE2618068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747760.1;locus_tag=LVR01_01955;product=M15 family metallopeptidase;protein_id=MCE2618068.1;transl_table=11 JAJSBG010000003.1 Genbank gene 70862 71335 . - . ID=gene-LVR01_01960;Name=LVR01_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01960 JAJSBG010000003.1 Protein Homology CDS 70862 71335 . - 0 ID=cds-MCE2618069.1;Parent=gene-LVR01_01960;Dbxref=NCBI_GP:MCE2618069.1;Name=MCE2618069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255532.1;locus_tag=LVR01_01960;product=HIT family protein;protein_id=MCE2618069.1;transl_table=11 JAJSBG010000003.1 Genbank gene 71337 72374 . - . ID=gene-LVR01_01965;Name=LVR01_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01965 JAJSBG010000003.1 Protein Homology CDS 71337 72374 . - 0 ID=cds-MCE2618070.1;Parent=gene-LVR01_01965;Dbxref=NCBI_GP:MCE2618070.1;Name=MCE2618070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077203.1;locus_tag=LVR01_01965;product=M42 family metallopeptidase;protein_id=MCE2618070.1;transl_table=11 JAJSBG010000003.1 Genbank gene 72577 73902 . - . ID=gene-LVR01_01970;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LVR01_01970 JAJSBG010000003.1 Protein Homology CDS 72577 73902 . - 0 ID=cds-MCE2618071.1;Parent=gene-LVR01_01970;Dbxref=NCBI_GP:MCE2618071.1;Name=MCE2618071.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152071.1;locus_tag=LVR01_01970;product=branched-chain amino acid transport system II carrier protein;protein_id=MCE2618071.1;transl_table=11 JAJSBG010000003.1 Genbank gene 74074 74361 . - . ID=gene-LVR01_01975;Name=LVR01_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01975 JAJSBG010000003.1 Protein Homology CDS 74074 74361 . - 0 ID=cds-MCE2618072.1;Parent=gene-LVR01_01975;Dbxref=NCBI_GP:MCE2618072.1;Name=MCE2618072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658232.1;locus_tag=LVR01_01975;product=rhodanese-like domain-containing protein;protein_id=MCE2618072.1;transl_table=11 JAJSBG010000003.1 Genbank gene 74372 74608 . - . ID=gene-LVR01_01980;Name=LVR01_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01980 JAJSBG010000003.1 GeneMarkS-2+ CDS 74372 74608 . - 0 ID=cds-MCE2618073.1;Parent=gene-LVR01_01980;Dbxref=NCBI_GP:MCE2618073.1;Name=MCE2618073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_01980;product=hypothetical protein;protein_id=MCE2618073.1;transl_table=11 JAJSBG010000003.1 Genbank gene 74612 75190 . - . ID=gene-LVR01_01985;Name=LVR01_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01985 JAJSBG010000003.1 Protein Homology CDS 74612 75190 . - 0 ID=cds-MCE2618074.1;Parent=gene-LVR01_01985;Dbxref=NCBI_GP:MCE2618074.1;Name=MCE2618074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000486278.1;locus_tag=LVR01_01985;product=uracil-DNA glycosylase family protein;protein_id=MCE2618074.1;transl_table=11 JAJSBG010000003.1 Genbank gene 75244 76644 . - . ID=gene-LVR01_01990;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=LVR01_01990 JAJSBG010000003.1 Protein Homology CDS 75244 76644 . - 0 ID=cds-MCE2618075.1;Parent=gene-LVR01_01990;Dbxref=NCBI_GP:MCE2618075.1;Name=MCE2618075.1;gbkey=CDS;gene=pepV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125034.1;locus_tag=LVR01_01990;product=dipeptidase PepV;protein_id=MCE2618075.1;transl_table=11 JAJSBG010000003.1 Genbank gene 76657 77262 . - . ID=gene-LVR01_01995;Name=LVR01_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_01995 JAJSBG010000003.1 Protein Homology CDS 76657 77262 . - 0 ID=cds-MCE2618076.1;Parent=gene-LVR01_01995;Dbxref=NCBI_GP:MCE2618076.1;Name=MCE2618076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924506.1;locus_tag=LVR01_01995;product=nitroreductase family protein;protein_id=MCE2618076.1;transl_table=11 JAJSBG010000003.1 Genbank gene 77433 78233 . + . ID=gene-LVR01_02000;Name=LVR01_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02000 JAJSBG010000003.1 Protein Homology CDS 77433 78233 . + 0 ID=cds-MCE2618077.1;Parent=gene-LVR01_02000;Dbxref=NCBI_GP:MCE2618077.1;Name=MCE2618077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714621.1;locus_tag=LVR01_02000;product=amino acid ABC transporter substrate-binding protein;protein_id=MCE2618077.1;transl_table=11 JAJSBG010000003.1 Genbank gene 78299 79132 . - . ID=gene-LVR01_02005;Name=LVR01_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02005 JAJSBG010000003.1 Protein Homology CDS 78299 79132 . - 0 ID=cds-MCE2618078.1;Parent=gene-LVR01_02005;Dbxref=NCBI_GP:MCE2618078.1;Name=MCE2618078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015777.1;locus_tag=LVR01_02005;product=metallophosphoesterase family protein;protein_id=MCE2618078.1;transl_table=11 JAJSBG010000003.1 Genbank gene 79122 80969 . - . ID=gene-LVR01_02010;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LVR01_02010 JAJSBG010000003.1 Protein Homology CDS 79122 80969 . - 0 ID=cds-MCE2618079.1;Parent=gene-LVR01_02010;Dbxref=NCBI_GP:MCE2618079.1;Name=MCE2618079.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061148.1;locus_tag=LVR01_02010;product=excinuclease ABC subunit UvrC;protein_id=MCE2618079.1;transl_table=11 JAJSBG010000003.1 Genbank gene 81008 81709 . - . ID=gene-LVR01_02015;Name=LVR01_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02015 JAJSBG010000003.1 Protein Homology CDS 81008 81709 . - 0 ID=cds-MCE2618080.1;Parent=gene-LVR01_02015;Dbxref=NCBI_GP:MCE2618080.1;Name=MCE2618080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267193.1;locus_tag=LVR01_02015;product=M57 family metalloprotease;protein_id=MCE2618080.1;transl_table=11 JAJSBG010000003.1 Genbank gene 81788 83020 . - . ID=gene-LVR01_02020;Name=murN;gbkey=Gene;gene=murN;gene_biotype=protein_coding;locus_tag=LVR01_02020 JAJSBG010000003.1 Protein Homology CDS 81788 83020 . - 0 ID=cds-MCE2618081.1;Parent=gene-LVR01_02020;Dbxref=NCBI_GP:MCE2618081.1;Name=MCE2618081.1;gbkey=CDS;gene=murN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229509.1;locus_tag=LVR01_02020;product=peptidoglycan bridge formation alanyltransferase MurN;protein_id=MCE2618081.1;transl_table=11 JAJSBG010000003.1 Genbank gene 83025 84245 . - . ID=gene-LVR01_02025;Name=LVR01_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02025 JAJSBG010000003.1 Protein Homology CDS 83025 84245 . - 0 ID=cds-MCE2618082.1;Parent=gene-LVR01_02025;Dbxref=NCBI_GP:MCE2618082.1;Name=MCE2618082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001819885.1;locus_tag=LVR01_02025;product=aminoacyltransferase;protein_id=MCE2618082.1;transl_table=11 JAJSBG010000003.1 Genbank gene 84376 85155 . - . ID=gene-LVR01_02030;Name=LVR01_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02030 JAJSBG010000003.1 Protein Homology CDS 84376 85155 . - 0 ID=cds-MCE2618083.1;Parent=gene-LVR01_02030;Dbxref=NCBI_GP:MCE2618083.1;Name=MCE2618083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290006.1;locus_tag=LVR01_02030;product=esterase family protein;protein_id=MCE2618083.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 85224 86884 . - . ID=gene-LVR01_02035;Name=LVR01_02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02035;pseudo=true JAJSBG010000003.1 Protein Homology CDS 85224 86884 . - 0 ID=cds-LVR01_02035;Parent=gene-LVR01_02035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520470.1;locus_tag=LVR01_02035;product=ribonuclease J;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 87058 89280 . - . ID=gene-LVR01_02040;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LVR01_02040 JAJSBG010000003.1 Protein Homology CDS 87058 89280 . - 0 ID=cds-MCE2618084.1;Parent=gene-LVR01_02040;Dbxref=NCBI_GP:MCE2618084.1;Name=MCE2618084.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832038.1;locus_tag=LVR01_02040;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=MCE2618084.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 89457 90086 . + . ID=gene-LVR01_02045;Name=LVR01_02045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02045;pseudo=true JAJSBG010000003.1 Protein Homology CDS 89457 90086 . + 0 ID=cds-LVR01_02045;Parent=gene-LVR01_02045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398007.1;locus_tag=LVR01_02045;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 90324 90983 . + . ID=gene-LVR01_02050;Name=LVR01_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02050 JAJSBG010000003.1 Protein Homology CDS 90324 90983 . + 0 ID=cds-MCE2618085.1;Parent=gene-LVR01_02050;Dbxref=NCBI_GP:MCE2618085.1;Name=MCE2618085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443867.1;locus_tag=LVR01_02050;product=amino acid ABC transporter permease;protein_id=MCE2618085.1;transl_table=11 JAJSBG010000003.1 Genbank gene 90944 91171 . - . ID=gene-LVR01_02055;Name=LVR01_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02055 JAJSBG010000003.1 GeneMarkS-2+ CDS 90944 91171 . - 0 ID=cds-MCE2618086.1;Parent=gene-LVR01_02055;Dbxref=NCBI_GP:MCE2618086.1;Name=MCE2618086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_02055;product=hypothetical protein;protein_id=MCE2618086.1;transl_table=11 JAJSBG010000003.1 Genbank gene 91323 92513 . + . ID=gene-LVR01_02060;Name=LVR01_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02060 JAJSBG010000003.1 Protein Homology CDS 91323 92513 . + 0 ID=cds-MCE2618087.1;Parent=gene-LVR01_02060;Dbxref=NCBI_GP:MCE2618087.1;Name=MCE2618087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835812.1;locus_tag=LVR01_02060;product=ferric reductase-like transmembrane domain-containing protein;protein_id=MCE2618087.1;transl_table=11 JAJSBG010000003.1 Genbank gene 92834 93715 . - . ID=gene-LVR01_02065;Name=LVR01_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02065 JAJSBG010000003.1 Protein Homology CDS 92834 93715 . - 0 ID=cds-MCE2618088.1;Parent=gene-LVR01_02065;Dbxref=NCBI_GP:MCE2618088.1;Name=MCE2618088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=LVR01_02065;product=fructose-bisphosphate aldolase;protein_id=MCE2618088.1;transl_table=11 JAJSBG010000003.1 Genbank gene 93856 95184 . - . ID=gene-LVR01_02070;Name=vncS;gbkey=Gene;gene=vncS;gene_biotype=protein_coding;locus_tag=LVR01_02070 JAJSBG010000003.1 Protein Homology CDS 93856 95184 . - 0 ID=cds-MCE2618089.1;Parent=gene-LVR01_02070;Dbxref=NCBI_GP:MCE2618089.1;Name=MCE2618089.1;gbkey=CDS;gene=vncS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831335.1;locus_tag=LVR01_02070;product=sensor histidine kinase VncS;protein_id=MCE2618089.1;transl_table=11 JAJSBG010000003.1 Genbank gene 95181 95837 . - . ID=gene-LVR01_02075;Name=vncR;gbkey=Gene;gene=vncR;gene_biotype=protein_coding;locus_tag=LVR01_02075 JAJSBG010000003.1 Protein Homology CDS 95181 95837 . - 0 ID=cds-MCE2618090.1;Parent=gene-LVR01_02075;Dbxref=NCBI_GP:MCE2618090.1;Name=MCE2618090.1;gbkey=CDS;gene=vncR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334003.1;locus_tag=LVR01_02075;product=response regulator transcription factor VncR;protein_id=MCE2618090.1;transl_table=11 JAJSBG010000003.1 Genbank gene 96123 96884 . - . ID=gene-LVR01_02080;Name=LVR01_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02080 JAJSBG010000003.1 Protein Homology CDS 96123 96884 . - 0 ID=cds-MCE2618091.1;Parent=gene-LVR01_02080;Dbxref=NCBI_GP:MCE2618091.1;Name=MCE2618091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284985.1;locus_tag=LVR01_02080;product=hypothetical protein;protein_id=MCE2618091.1;transl_table=11 JAJSBG010000003.1 Genbank gene 96847 98781 . - . ID=gene-LVR01_02085;Name=LVR01_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02085 JAJSBG010000003.1 Protein Homology CDS 96847 98781 . - 0 ID=cds-MCE2618092.1;Parent=gene-LVR01_02085;Dbxref=NCBI_GP:MCE2618092.1;Name=MCE2618092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250146.1;locus_tag=LVR01_02085;product=CAP domain-containing protein;protein_id=MCE2618092.1;transl_table=11 JAJSBG010000003.1 Genbank gene 99079 100458 . - . ID=gene-LVR01_02090;Name=vex3;gbkey=Gene;gene=vex3;gene_biotype=protein_coding;locus_tag=LVR01_02090 JAJSBG010000003.1 Protein Homology CDS 99079 100458 . - 0 ID=cds-MCE2618093.1;Parent=gene-LVR01_02090;Dbxref=NCBI_GP:MCE2618093.1;Name=MCE2618093.1;gbkey=CDS;gene=vex3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269839.1;locus_tag=LVR01_02090;product=ABC transporter permease subunit Vex3;protein_id=MCE2618093.1;transl_table=11 JAJSBG010000003.1 Genbank gene 100524 101171 . - . ID=gene-LVR01_02095;Name=vex2;gbkey=Gene;gene=vex2;gene_biotype=protein_coding;locus_tag=LVR01_02095 JAJSBG010000003.1 Protein Homology CDS 100524 101171 . - 0 ID=cds-MCE2618094.1;Parent=gene-LVR01_02095;Dbxref=NCBI_GP:MCE2618094.1;Name=MCE2618094.1;gbkey=CDS;gene=vex2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173730.1;locus_tag=LVR01_02095;product=ABC transporter ATP-binding subunit Vex2;protein_id=MCE2618094.1;transl_table=11 JAJSBG010000003.1 Genbank gene 101184 102461 . - . ID=gene-LVR01_02100;Name=LVR01_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02100 JAJSBG010000003.1 Protein Homology CDS 101184 102461 . - 0 ID=cds-MCE2618095.1;Parent=gene-LVR01_02100;Dbxref=NCBI_GP:MCE2618095.1;Name=MCE2618095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068247.1;locus_tag=LVR01_02100;product=ABC transporter permease;protein_id=MCE2618095.1;transl_table=11 JAJSBG010000003.1 Genbank pseudogene 102696 102770 . - . ID=gene-LVR01_02105;Name=LVR01_02105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02105;pseudo=true JAJSBG010000003.1 Protein Homology CDS 102696 102770 . - 0 ID=cds-LVR01_02105;Parent=gene-LVR01_02105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003627959.1;locus_tag=LVR01_02105;product=IS66 family transposase;pseudo=true;transl_table=11 JAJSBG010000003.1 Genbank gene 102764 103114 . - . ID=gene-LVR01_02110;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LVR01_02110 JAJSBG010000003.1 Protein Homology CDS 102764 103114 . - 0 ID=cds-MCE2618096.1;Parent=gene-LVR01_02110;Dbxref=NCBI_GP:MCE2618096.1;Name=MCE2618096.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=LVR01_02110;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MCE2618096.1;transl_table=11 ##sequence-region JAJSBG010000040.1 1 16598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000040.1 Genbank region 1 16598 . + . ID=JAJSBG010000040.1:1..16598;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000040.1 Genbank gene 1 98 . + . ID=gene-LVR01_09070;Name=LVR01_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09070;partial=true;start_range=.,1 JAJSBG010000040.1 Protein Homology CDS 1 98 . + 2 ID=cds-MCE2619358.1;Parent=gene-LVR01_09070;Dbxref=NCBI_GP:MCE2619358.1;Name=MCE2619358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067623.1;locus_tag=LVR01_09070;partial=true;product=DUF3310 domain-containing protein;protein_id=MCE2619358.1;start_range=.,1;transl_table=11 JAJSBG010000040.1 Genbank gene 91 270 . + . ID=gene-LVR01_09075;Name=LVR01_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09075 JAJSBG010000040.1 Protein Homology CDS 91 270 . + 0 ID=cds-MCE2619359.1;Parent=gene-LVR01_09075;Dbxref=NCBI_GP:MCE2619359.1;Name=MCE2619359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007110.1;locus_tag=LVR01_09075;product=hypothetical protein;protein_id=MCE2619359.1;transl_table=11 JAJSBG010000040.1 Genbank gene 260 490 . + . ID=gene-LVR01_09080;Name=LVR01_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09080 JAJSBG010000040.1 Protein Homology CDS 260 490 . + 0 ID=cds-MCE2619360.1;Parent=gene-LVR01_09080;Dbxref=NCBI_GP:MCE2619360.1;Name=MCE2619360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998323.1;locus_tag=LVR01_09080;product=helix-turn-helix domain-containing protein;protein_id=MCE2619360.1;transl_table=11 JAJSBG010000040.1 Genbank gene 561 989 . + . ID=gene-LVR01_09085;Name=LVR01_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09085 JAJSBG010000040.1 Protein Homology CDS 561 989 . + 0 ID=cds-MCE2619361.1;Parent=gene-LVR01_09085;Dbxref=NCBI_GP:MCE2619361.1;Name=MCE2619361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=LVR01_09085;product=transcriptional regulator;protein_id=MCE2619361.1;transl_table=11 JAJSBG010000040.1 Genbank gene 1278 1820 . + . ID=gene-LVR01_09090;Name=LVR01_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09090 JAJSBG010000040.1 Protein Homology CDS 1278 1820 . + 0 ID=cds-MCE2619362.1;Parent=gene-LVR01_09090;Dbxref=NCBI_GP:MCE2619362.1;Name=MCE2619362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028149.1;locus_tag=LVR01_09090;product=site-specific integrase;protein_id=MCE2619362.1;transl_table=11 JAJSBG010000040.1 Genbank gene 2034 2330 . + . ID=gene-LVR01_09095;Name=LVR01_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09095 JAJSBG010000040.1 Protein Homology CDS 2034 2330 . + 0 ID=cds-MCE2619363.1;Parent=gene-LVR01_09095;Dbxref=NCBI_GP:MCE2619363.1;Name=MCE2619363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573817.1;locus_tag=LVR01_09095;product=HNH endonuclease;protein_id=MCE2619363.1;transl_table=11 JAJSBG010000040.1 Genbank gene 2449 2787 . + . ID=gene-LVR01_09100;Name=LVR01_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09100 JAJSBG010000040.1 Protein Homology CDS 2449 2787 . + 0 ID=cds-MCE2619364.1;Parent=gene-LVR01_09100;Dbxref=NCBI_GP:MCE2619364.1;Name=MCE2619364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000393459.1;locus_tag=LVR01_09100;product=hypothetical protein;protein_id=MCE2619364.1;transl_table=11 JAJSBG010000040.1 Genbank gene 2784 4424 . + . ID=gene-LVR01_09105;Name=LVR01_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09105 JAJSBG010000040.1 Protein Homology CDS 2784 4424 . + 0 ID=cds-MCE2619365.1;Parent=gene-LVR01_09105;Dbxref=NCBI_GP:MCE2619365.1;Name=MCE2619365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623346.1;locus_tag=LVR01_09105;product=terminase large subunit;protein_id=MCE2619365.1;transl_table=11 JAJSBG010000040.1 Genbank gene 4480 5628 . + . ID=gene-LVR01_09110;Name=LVR01_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09110 JAJSBG010000040.1 Protein Homology CDS 4480 5628 . + 0 ID=cds-MCE2619366.1;Parent=gene-LVR01_09110;Dbxref=NCBI_GP:MCE2619366.1;Name=MCE2619366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506468.1;locus_tag=LVR01_09110;product=phage portal protein;protein_id=MCE2619366.1;transl_table=11 JAJSBG010000040.1 Genbank gene 5609 6331 . + . ID=gene-LVR01_09115;Name=LVR01_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09115 JAJSBG010000040.1 Protein Homology CDS 5609 6331 . + 0 ID=cds-MCE2619367.1;Parent=gene-LVR01_09115;Dbxref=NCBI_GP:MCE2619367.1;Name=MCE2619367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152604.1;locus_tag=LVR01_09115;product=ATP-dependent Clp protease proteolytic subunit;protein_id=MCE2619367.1;transl_table=11 JAJSBG010000040.1 Genbank gene 6350 7465 . + . ID=gene-LVR01_09120;Name=LVR01_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09120 JAJSBG010000040.1 Protein Homology CDS 6350 7465 . + 0 ID=cds-MCE2619368.1;Parent=gene-LVR01_09120;Dbxref=NCBI_GP:MCE2619368.1;Name=MCE2619368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976934.1;locus_tag=LVR01_09120;product=phage major capsid protein;protein_id=MCE2619368.1;transl_table=11 JAJSBG010000040.1 Genbank gene 7479 7769 . + . ID=gene-LVR01_09125;Name=LVR01_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09125 JAJSBG010000040.1 Protein Homology CDS 7479 7769 . + 0 ID=cds-MCE2619369.1;Parent=gene-LVR01_09125;Dbxref=NCBI_GP:MCE2619369.1;Name=MCE2619369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401889.1;locus_tag=LVR01_09125;product=phage gp6-like head-tail connector protein;protein_id=MCE2619369.1;transl_table=11 JAJSBG010000040.1 Genbank gene 7762 7950 . + . ID=gene-LVR01_09130;Name=LVR01_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09130 JAJSBG010000040.1 Protein Homology CDS 7762 7950 . + 0 ID=cds-MCE2619370.1;Parent=gene-LVR01_09130;Dbxref=NCBI_GP:MCE2619370.1;Name=MCE2619370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598695.1;locus_tag=LVR01_09130;product=hypothetical protein;protein_id=MCE2619370.1;transl_table=11 JAJSBG010000040.1 Genbank gene 7937 8326 . + . ID=gene-LVR01_09135;Name=LVR01_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09135 JAJSBG010000040.1 Protein Homology CDS 7937 8326 . + 0 ID=cds-MCE2619371.1;Parent=gene-LVR01_09135;Dbxref=NCBI_GP:MCE2619371.1;Name=MCE2619371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830391.1;locus_tag=LVR01_09135;product=phage head-tail adapter protein;protein_id=MCE2619371.1;transl_table=11 JAJSBG010000040.1 Genbank gene 8319 8717 . + . ID=gene-LVR01_09140;Name=LVR01_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09140 JAJSBG010000040.1 Protein Homology CDS 8319 8717 . + 0 ID=cds-MCE2619372.1;Parent=gene-LVR01_09140;Dbxref=NCBI_GP:MCE2619372.1;Name=MCE2619372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094502.1;locus_tag=LVR01_09140;product=hypothetical protein;protein_id=MCE2619372.1;transl_table=11 JAJSBG010000040.1 Genbank gene 8717 9097 . + . ID=gene-LVR01_09145;Name=LVR01_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09145 JAJSBG010000040.1 Protein Homology CDS 8717 9097 . + 0 ID=cds-MCE2619373.1;Parent=gene-LVR01_09145;Dbxref=NCBI_GP:MCE2619373.1;Name=MCE2619373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588569.1;locus_tag=LVR01_09145;product=hypothetical protein;protein_id=MCE2619373.1;transl_table=11 JAJSBG010000040.1 Genbank gene 9114 9710 . + . ID=gene-LVR01_09150;Name=LVR01_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09150 JAJSBG010000040.1 Protein Homology CDS 9114 9710 . + 0 ID=cds-MCE2619374.1;Parent=gene-LVR01_09150;Dbxref=NCBI_GP:MCE2619374.1;Name=MCE2619374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216339.1;locus_tag=LVR01_09150;product=phage tail protein;protein_id=MCE2619374.1;transl_table=11 JAJSBG010000040.1 Genbank gene 9756 10049 . + . ID=gene-LVR01_09155;Name=LVR01_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09155 JAJSBG010000040.1 Protein Homology CDS 9756 10049 . + 0 ID=cds-MCE2619375.1;Parent=gene-LVR01_09155;Dbxref=NCBI_GP:MCE2619375.1;Name=MCE2619375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151570.1;locus_tag=LVR01_09155;product=hypothetical protein;protein_id=MCE2619375.1;transl_table=11 JAJSBG010000040.1 Genbank gene 10298 10528 . + . ID=gene-LVR01_09160;Name=LVR01_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09160 JAJSBG010000040.1 Protein Homology CDS 10298 10528 . + 0 ID=cds-MCE2619376.1;Parent=gene-LVR01_09160;Dbxref=NCBI_GP:MCE2619376.1;Name=MCE2619376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087359.1;locus_tag=LVR01_09160;product=hypothetical protein;protein_id=MCE2619376.1;transl_table=11 JAJSBG010000040.1 Genbank gene 10585 14760 . + . ID=gene-LVR01_09165;Name=LVR01_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09165 JAJSBG010000040.1 Protein Homology CDS 10585 14760 . + 0 ID=cds-MCE2619377.1;Parent=gene-LVR01_09165;Dbxref=NCBI_GP:MCE2619377.1;Name=MCE2619377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146321.1;locus_tag=LVR01_09165;product=phage tail tape measure protein;protein_id=MCE2619377.1;transl_table=11 JAJSBG010000040.1 Genbank gene 14760 15458 . + . ID=gene-LVR01_09170;Name=LVR01_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09170 JAJSBG010000040.1 Protein Homology CDS 14760 15458 . + 0 ID=cds-MCE2619378.1;Parent=gene-LVR01_09170;Dbxref=NCBI_GP:MCE2619378.1;Name=MCE2619378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499602.1;locus_tag=LVR01_09170;product=phage tail protein;protein_id=MCE2619378.1;transl_table=11 JAJSBG010000040.1 Genbank gene 15455 16598 . + . ID=gene-LVR01_09175;Name=LVR01_09175;end_range=16598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09175;partial=true JAJSBG010000040.1 Protein Homology CDS 15455 16598 . + 0 ID=cds-MCE2619379.1;Parent=gene-LVR01_09175;Dbxref=NCBI_GP:MCE2619379.1;Name=MCE2619379.1;end_range=16598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=LVR01_09175;partial=true;product=phage tail protein;protein_id=MCE2619379.1;transl_table=11 ##sequence-region JAJSBG010000041.1 1 15623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000041.1 Genbank region 1 15623 . + . ID=JAJSBG010000041.1:1..15623;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000041.1 Genbank gene 1 242 . + . ID=gene-LVR01_09180;Name=LVR01_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09180;partial=true;start_range=.,1 JAJSBG010000041.1 Protein Homology CDS 1 242 . + 2 ID=cds-MCE2619380.1;Parent=gene-LVR01_09180;Dbxref=NCBI_GP:MCE2619380.1;Name=MCE2619380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=LVR01_09180;partial=true;product=IS3 family transposase;protein_id=MCE2619380.1;start_range=.,1;transl_table=11 JAJSBG010000041.1 Genbank gene 380 2575 . - . ID=gene-LVR01_09185;Name=pbp1a;gbkey=Gene;gene=pbp1a;gene_biotype=protein_coding;locus_tag=LVR01_09185 JAJSBG010000041.1 Protein Homology CDS 380 2575 . - 0 ID=cds-MCE2619381.1;Parent=gene-LVR01_09185;Dbxref=NCBI_GP:MCE2619381.1;Name=MCE2619381.1;gbkey=CDS;gene=pbp1a;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039981.1;locus_tag=LVR01_09185;product=penicillin-binding protein PBP1A;protein_id=MCE2619381.1;transl_table=11 JAJSBG010000041.1 Genbank gene 2572 3168 . - . ID=gene-LVR01_09190;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=LVR01_09190 JAJSBG010000041.1 Protein Homology CDS 2572 3168 . - 0 ID=cds-MCE2619382.1;Parent=gene-LVR01_09190;Dbxref=NCBI_GP:MCE2619382.1;Name=MCE2619382.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248773.1;locus_tag=LVR01_09190;product=Holliday junction resolvase RecU;protein_id=MCE2619382.1;transl_table=11 JAJSBG010000041.1 Genbank gene 3596 3976 . + . ID=gene-LVR01_09195;Name=LVR01_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09195 JAJSBG010000041.1 GeneMarkS-2+ CDS 3596 3976 . + 0 ID=cds-MCE2619383.1;Parent=gene-LVR01_09195;Dbxref=NCBI_GP:MCE2619383.1;Name=MCE2619383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_09195;product=hypothetical protein;protein_id=MCE2619383.1;transl_table=11 JAJSBG010000041.1 Genbank gene 4732 5316 . - . ID=gene-LVR01_09200;Name=LVR01_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09200 JAJSBG010000041.1 Protein Homology CDS 4732 5316 . - 0 ID=cds-MCE2619384.1;Parent=gene-LVR01_09200;Dbxref=NCBI_GP:MCE2619384.1;Name=MCE2619384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016763.2;locus_tag=LVR01_09200;product=VanZ family protein;protein_id=MCE2619384.1;transl_table=11 JAJSBG010000041.1 Genbank gene 5384 5911 . + . ID=gene-LVR01_09205;Name=LVR01_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09205 JAJSBG010000041.1 Protein Homology CDS 5384 5911 . + 0 ID=cds-MCE2619385.1;Parent=gene-LVR01_09205;Dbxref=NCBI_GP:MCE2619385.1;Name=MCE2619385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179549.1;locus_tag=LVR01_09205;product=DUF1273 domain-containing protein;protein_id=MCE2619385.1;transl_table=11 JAJSBG010000041.1 Genbank gene 5981 6322 . + . ID=gene-LVR01_09210;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=LVR01_09210 JAJSBG010000041.1 Protein Homology CDS 5981 6322 . + 0 ID=cds-MCE2619386.1;Parent=gene-LVR01_09210;Dbxref=NCBI_GP:MCE2619386.1;Name=MCE2619386.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200645.1;locus_tag=LVR01_09210;product=cell division regulator GpsB;protein_id=MCE2619386.1;transl_table=11 JAJSBG010000041.1 Genbank gene 6343 6723 . + . ID=gene-LVR01_09215;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LVR01_09215 JAJSBG010000041.1 cmsearch RNase_P_RNA 6343 6723 . + . ID=rna-LVR01_09215;Parent=gene-LVR01_09215;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_09215;product=RNase P RNA component class B JAJSBG010000041.1 cmsearch exon 6343 6723 . + . ID=exon-LVR01_09215-1;Parent=rna-LVR01_09215;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_09215;product=RNase P RNA component class B JAJSBG010000041.1 Genbank gene 6808 7965 . + . ID=gene-LVR01_09220;Name=LVR01_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09220 JAJSBG010000041.1 Protein Homology CDS 6808 7965 . + 0 ID=cds-MCE2619387.1;Parent=gene-LVR01_09220;Dbxref=NCBI_GP:MCE2619387.1;Name=MCE2619387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711388.1;locus_tag=LVR01_09220;product=class I SAM-dependent RNA methyltransferase;protein_id=MCE2619387.1;transl_table=11 JAJSBG010000041.1 Genbank gene 7978 9384 . + . ID=gene-LVR01_09225;Name=mapZ;gbkey=Gene;gene=mapZ;gene_biotype=protein_coding;locus_tag=LVR01_09225 JAJSBG010000041.1 Protein Homology CDS 7978 9384 . + 0 ID=cds-MCE2619388.1;Parent=gene-LVR01_09225;Dbxref=NCBI_GP:MCE2619388.1;Name=MCE2619388.1;gbkey=CDS;gene=mapZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039255.1;locus_tag=LVR01_09225;product=mid-cell-anchored protein MapZ;protein_id=MCE2619388.1;transl_table=11 JAJSBG010000041.1 Genbank gene 9460 10884 . + . ID=gene-LVR01_09230;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LVR01_09230 JAJSBG010000041.1 Protein Homology CDS 9460 10884 . + 0 ID=cds-MCE2619389.1;Parent=gene-LVR01_09230;Dbxref=NCBI_GP:MCE2619389.1;Name=MCE2619389.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185725.1;locus_tag=LVR01_09230;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=MCE2619389.1;transl_table=11 JAJSBG010000041.1 Genbank gene 10896 11585 . + . ID=gene-LVR01_09235;Name=LVR01_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09235 JAJSBG010000041.1 Protein Homology CDS 10896 11585 . + 0 ID=cds-MCE2619390.1;Parent=gene-LVR01_09235;Dbxref=NCBI_GP:MCE2619390.1;Name=MCE2619390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000518023.1;locus_tag=LVR01_09235;product=response regulator transcription factor;protein_id=MCE2619390.1;transl_table=11 JAJSBG010000041.1 Genbank pseudogene 11683 12681 . + . ID=gene-LVR01_09240;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=pseudogene;locus_tag=LVR01_09240;pseudo=true JAJSBG010000041.1 Protein Homology CDS 11683 12681 . + 0 ID=cds-LVR01_09240;Parent=gene-LVR01_09240;Note=internal stop;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=LVR01_09240;product=choline-binding protein CbpJ;pseudo=true;transl_table=11 JAJSBG010000041.1 Genbank gene 12799 14031 . - . ID=gene-LVR01_09245;Name=LVR01_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09245 JAJSBG010000041.1 Protein Homology CDS 12799 14031 . - 0 ID=cds-MCE2619391.1;Parent=gene-LVR01_09245;Dbxref=NCBI_GP:MCE2619391.1;Name=MCE2619391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765682.1;locus_tag=LVR01_09245;product=MFS transporter;protein_id=MCE2619391.1;transl_table=11 JAJSBG010000041.1 Genbank pseudogene 14549 14886 . - . ID=gene-LVR01_09250;Name=LVR01_09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09250;pseudo=true JAJSBG010000041.1 Protein Homology CDS 14549 14886 . - 0 ID=cds-LVR01_09250;Parent=gene-LVR01_09250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811282.1;locus_tag=LVR01_09250;product=lantibiotic-modifying protein;pseudo=true;transl_table=11 JAJSBG010000041.1 Genbank gene 15382 15623 . - . ID=gene-LVR01_09255;Name=LVR01_09255;end_range=15623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09255;partial=true JAJSBG010000041.1 Protein Homology CDS 15382 15623 . - 2 ID=cds-MCE2619392.1;Parent=gene-LVR01_09255;Dbxref=NCBI_GP:MCE2619392.1;Name=MCE2619392.1;end_range=15623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=LVR01_09255;partial=true;product=IS3 family transposase;protein_id=MCE2619392.1;transl_table=11 ##sequence-region JAJSBG010000042.1 1 15536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000042.1 Genbank region 1 15536 . + . ID=JAJSBG010000042.1:1..15536;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000042.1 Genbank gene 179 1237 . + . ID=gene-LVR01_09260;Name=LVR01_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09260 JAJSBG010000042.1 Protein Homology CDS 179 1237 . + 0 ID=cds-MCE2619393.1;Parent=gene-LVR01_09260;Dbxref=NCBI_GP:MCE2619393.1;Name=MCE2619393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730573.1;locus_tag=LVR01_09260;product=AAA family ATPase;protein_id=MCE2619393.1;transl_table=11 JAJSBG010000042.1 Genbank gene 1247 2026 . + . ID=gene-LVR01_09265;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LVR01_09265 JAJSBG010000042.1 Protein Homology CDS 1247 2026 . + 0 ID=cds-MCE2619394.1;Parent=gene-LVR01_09265;Dbxref=NCBI_GP:MCE2619394.1;Name=MCE2619394.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736880.1;locus_tag=LVR01_09265;product=nicotinamide riboside transporter PnuC;protein_id=MCE2619394.1;transl_table=11 JAJSBG010000042.1 Genbank gene 2028 2798 . + . ID=gene-LVR01_09270;Name=LVR01_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09270 JAJSBG010000042.1 Protein Homology CDS 2028 2798 . + 0 ID=cds-MCE2619395.1;Parent=gene-LVR01_09270;Dbxref=NCBI_GP:MCE2619395.1;Name=MCE2619395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785840.1;locus_tag=LVR01_09270;product=NUDIX hydrolase;protein_id=MCE2619395.1;transl_table=11 JAJSBG010000042.1 Genbank pseudogene 2872 3101 . - . ID=gene-LVR01_09275;Name=LVR01_09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09275;pseudo=true JAJSBG010000042.1 Protein Homology CDS 2872 3101 . - 0 ID=cds-LVR01_09275;Parent=gene-LVR01_09275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933124.1;locus_tag=LVR01_09275;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000042.1 Genbank gene 3389 4087 . + . ID=gene-LVR01_09280;Name=LVR01_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09280 JAJSBG010000042.1 Protein Homology CDS 3389 4087 . + 0 ID=cds-MCE2619396.1;Parent=gene-LVR01_09280;Dbxref=NCBI_GP:MCE2619396.1;Name=MCE2619396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730888.1;locus_tag=LVR01_09280;product=hypothetical protein;protein_id=MCE2619396.1;transl_table=11 JAJSBG010000042.1 Genbank gene 4158 5138 . - . ID=gene-LVR01_09285;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LVR01_09285 JAJSBG010000042.1 Protein Homology CDS 4158 5138 . - 0 ID=cds-MCE2619397.1;Parent=gene-LVR01_09285;Dbxref=NCBI_GP:MCE2619397.1;Name=MCE2619397.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398259.1;locus_tag=LVR01_09285;product=tRNA dihydrouridine synthase DusB;protein_id=MCE2619397.1;transl_table=11 JAJSBG010000042.1 Genbank gene 5125 5997 . - . ID=gene-LVR01_09290;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LVR01_09290 JAJSBG010000042.1 Protein Homology CDS 5125 5997 . - 0 ID=cds-MCE2619398.1;Parent=gene-LVR01_09290;Dbxref=NCBI_GP:MCE2619398.1;Name=MCE2619398.1;gbkey=CDS;gene=hslO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357853.1;locus_tag=LVR01_09290;product=Hsp33 family molecular chaperone HslO;protein_id=MCE2619398.1;transl_table=11 JAJSBG010000042.1 Genbank gene 6162 7589 . + . ID=gene-LVR01_09295;Name=LVR01_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09295 JAJSBG010000042.1 Protein Homology CDS 6162 7589 . + 0 ID=cds-MCE2619399.1;Parent=gene-LVR01_09295;Dbxref=NCBI_GP:MCE2619399.1;Name=MCE2619399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280545.1;locus_tag=LVR01_09295;product=helix-turn-helix domain-containing protein;protein_id=MCE2619399.1;transl_table=11 JAJSBG010000042.1 Genbank gene 7723 9009 . - . ID=gene-LVR01_09300;Name=LVR01_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09300 JAJSBG010000042.1 Protein Homology CDS 7723 9009 . - 0 ID=cds-MCE2619400.1;Parent=gene-LVR01_09300;Dbxref=NCBI_GP:MCE2619400.1;Name=MCE2619400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122618.1;locus_tag=LVR01_09300;product=DUF6161 domain-containing protein;protein_id=MCE2619400.1;transl_table=11 JAJSBG010000042.1 Genbank gene 9022 10008 . - . ID=gene-LVR01_09305;Name=LVR01_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09305 JAJSBG010000042.1 Protein Homology CDS 9022 10008 . - 0 ID=cds-MCE2619401.1;Parent=gene-LVR01_09305;Dbxref=NCBI_GP:MCE2619401.1;Name=MCE2619401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002278369.1;locus_tag=LVR01_09305;product=adenine-specific methyltransferase EcoRI family protein;protein_id=MCE2619401.1;transl_table=11 JAJSBG010000042.1 Genbank gene 10013 10852 . - . ID=gene-LVR01_09310;Name=LVR01_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09310 JAJSBG010000042.1 Protein Homology CDS 10013 10852 . - 0 ID=cds-MCE2619402.1;Parent=gene-LVR01_09310;Dbxref=NCBI_GP:MCE2619402.1;Name=MCE2619402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002278368.1;locus_tag=LVR01_09310;product=restriction endonuclease;protein_id=MCE2619402.1;transl_table=11 JAJSBG010000042.1 Genbank gene 11170 12678 . + . ID=gene-LVR01_09315;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LVR01_09315 JAJSBG010000042.1 Protein Homology CDS 11170 12678 . + 0 ID=cds-MCE2619403.1;Parent=gene-LVR01_09315;Dbxref=NCBI_GP:MCE2619403.1;Name=MCE2619403.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076796.1;locus_tag=LVR01_09315;product=glycerol kinase GlpK;protein_id=MCE2619403.1;transl_table=11 JAJSBG010000042.1 Genbank gene 12720 14546 . + . ID=gene-LVR01_09320;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=LVR01_09320 JAJSBG010000042.1 Protein Homology CDS 12720 14546 . + 0 ID=cds-MCE2619404.1;Parent=gene-LVR01_09320;Dbxref=NCBI_GP:MCE2619404.1;Name=MCE2619404.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865074.1;locus_tag=LVR01_09320;product=type 1 glycerol-3-phosphate oxidase;protein_id=MCE2619404.1;transl_table=11 JAJSBG010000042.1 Genbank gene 14616 15320 . + . ID=gene-LVR01_09325;Name=LVR01_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09325 JAJSBG010000042.1 Protein Homology CDS 14616 15320 . + 0 ID=cds-MCE2619405.1;Parent=gene-LVR01_09325;Dbxref=NCBI_GP:MCE2619405.1;Name=MCE2619405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262009.1;locus_tag=LVR01_09325;product=aquaporin family protein;protein_id=MCE2619405.1;transl_table=11 ##sequence-region JAJSBG010000043.1 1 15368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000043.1 Genbank region 1 15368 . + . ID=JAJSBG010000043.1:1..15368;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000043.1 Genbank gene 129 860 . - . ID=gene-LVR01_09330;Name=LVR01_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09330 JAJSBG010000043.1 Protein Homology CDS 129 860 . - 0 ID=cds-MCE2619406.1;Parent=gene-LVR01_09330;Dbxref=NCBI_GP:MCE2619406.1;Name=MCE2619406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221865.1;locus_tag=LVR01_09330;product=response regulator transcription factor;protein_id=MCE2619406.1;transl_table=11 JAJSBG010000043.1 Genbank gene 857 1672 . - . ID=gene-LVR01_09335;Name=LVR01_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09335 JAJSBG010000043.1 Protein Homology CDS 857 1672 . - 0 ID=cds-MCE2619407.1;Parent=gene-LVR01_09335;Dbxref=NCBI_GP:MCE2619407.1;Name=MCE2619407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025854.2;locus_tag=LVR01_09335;product=GHKL domain-containing protein;protein_id=MCE2619407.1;transl_table=11 JAJSBG010000043.1 Genbank gene 2237 2383 . - . ID=gene-LVR01_09340;Name=LVR01_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09340 JAJSBG010000043.1 Protein Homology CDS 2237 2383 . - 0 ID=cds-MCE2619408.1;Parent=gene-LVR01_09340;Dbxref=NCBI_GP:MCE2619408.1;Name=MCE2619408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425304.1;locus_tag=LVR01_09340;product=smi_0057.1 family bacteriocin-like peptide;protein_id=MCE2619408.1;transl_table=11 JAJSBG010000043.1 Genbank gene 2536 3705 . - . ID=gene-LVR01_09345;Name=LVR01_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09345 JAJSBG010000043.1 Protein Homology CDS 2536 3705 . - 0 ID=cds-MCE2619409.1;Parent=gene-LVR01_09345;Dbxref=NCBI_GP:MCE2619409.1;Name=MCE2619409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748706.1;locus_tag=LVR01_09345;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2619409.1;transl_table=11 JAJSBG010000043.1 Genbank gene 3818 4675 . - . ID=gene-LVR01_09350;Name=LVR01_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09350 JAJSBG010000043.1 Protein Homology CDS 3818 4675 . - 0 ID=cds-MCE2619410.1;Parent=gene-LVR01_09350;Dbxref=NCBI_GP:MCE2619410.1;Name=MCE2619410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976808.1;locus_tag=LVR01_09350;product=NlpC/P60 family protein;protein_id=MCE2619410.1;transl_table=11 JAJSBG010000043.1 Genbank gene 4956 5189 . - . ID=gene-LVR01_09355;Name=LVR01_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09355 JAJSBG010000043.1 Protein Homology CDS 4956 5189 . - 0 ID=cds-MCE2619411.1;Parent=gene-LVR01_09355;Dbxref=NCBI_GP:MCE2619411.1;Name=MCE2619411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136447.1;locus_tag=LVR01_09355;product=acyl carrier protein;protein_id=MCE2619411.1;transl_table=11 JAJSBG010000043.1 Genbank gene 5195 6187 . - . ID=gene-LVR01_09360;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LVR01_09360 JAJSBG010000043.1 Protein Homology CDS 5195 6187 . - 0 ID=cds-MCE2619412.1;Parent=gene-LVR01_09360;Dbxref=NCBI_GP:MCE2619412.1;Name=MCE2619412.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717456.1;locus_tag=LVR01_09360;product=phosphate acyltransferase PlsX;protein_id=MCE2619412.1;transl_table=11 JAJSBG010000043.1 Genbank gene 6184 6954 . - . ID=gene-LVR01_09365;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LVR01_09365 JAJSBG010000043.1 Protein Homology CDS 6184 6954 . - 0 ID=cds-MCE2619413.1;Parent=gene-LVR01_09365;Dbxref=NCBI_GP:MCE2619413.1;Name=MCE2619413.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616164.1;locus_tag=LVR01_09365;product=DNA repair protein RecO;protein_id=MCE2619413.1;transl_table=11 JAJSBG010000043.1 Genbank gene 6951 8120 . - . ID=gene-LVR01_09370;Name=LVR01_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09370 JAJSBG010000043.1 Protein Homology CDS 6951 8120 . - 0 ID=cds-MCE2619414.1;Parent=gene-LVR01_09370;Dbxref=NCBI_GP:MCE2619414.1;Name=MCE2619414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519430.1;locus_tag=LVR01_09370;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCE2619414.1;transl_table=11 JAJSBG010000043.1 Genbank gene 8269 9279 . + . ID=gene-LVR01_09375;Name=LVR01_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09375 JAJSBG010000043.1 Protein Homology CDS 8269 9279 . + 0 ID=cds-MCE2619415.1;Parent=gene-LVR01_09375;Dbxref=NCBI_GP:MCE2619415.1;Name=MCE2619415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397796.1;locus_tag=LVR01_09375;product=YeiH family protein;protein_id=MCE2619415.1;transl_table=11 JAJSBG010000043.1 Genbank gene 9499 9936 . - . ID=gene-LVR01_09380;Name=LVR01_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09380 JAJSBG010000043.1 Protein Homology CDS 9499 9936 . - 0 ID=cds-MCE2619416.1;Parent=gene-LVR01_09380;Dbxref=NCBI_GP:MCE2619416.1;Name=MCE2619416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269962.1;locus_tag=LVR01_09380;product=CoA-binding protein;protein_id=MCE2619416.1;transl_table=11 JAJSBG010000043.1 Genbank gene 10021 12654 . - . ID=gene-LVR01_09385;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LVR01_09385 JAJSBG010000043.1 Protein Homology CDS 10021 12654 . - 0 ID=cds-MCE2619417.1;Parent=gene-LVR01_09385;Dbxref=NCBI_GP:MCE2619417.1;Name=MCE2619417.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014932012.1;locus_tag=LVR01_09385;product=DNA polymerase I;protein_id=MCE2619417.1;transl_table=11 JAJSBG010000043.1 Genbank pseudogene 13099 13582 . + . ID=gene-LVR01_09390;Name=LVR01_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09390;pseudo=true JAJSBG010000043.1 Protein Homology CDS 13099 13582 . + 0 ID=cds-LVR01_09390;Parent=gene-LVR01_09390;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941577.1;locus_tag=LVR01_09390;product=transposase;pseudo=true;transl_table=11 JAJSBG010000043.1 Genbank pseudogene 13805 14137 . - . ID=gene-LVR01_09395;Name=LVR01_09395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09395;pseudo=true JAJSBG010000043.1 Protein Homology CDS 13805 14137 . - 0 ID=cds-LVR01_09395;Parent=gene-LVR01_09395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_09395;product=N-acetylmuramoyl-L-alanine amidase family protein;pseudo=true;transl_table=11 JAJSBG010000043.1 Genbank pseudogene 14760 15185 . - . ID=gene-LVR01_09400;Name=LVR01_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09400;pseudo=true JAJSBG010000043.1 Protein Homology CDS 14760 15185 . - 0 ID=cds-LVR01_09400;Parent=gene-LVR01_09400;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001153868.1;locus_tag=LVR01_09400;product=IS30 family transposase;pseudo=true;transl_table=11 JAJSBG010000043.1 Genbank pseudogene 15186 15368 . - . ID=gene-LVR01_09405;Name=LVR01_09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09405;pseudo=true JAJSBG010000043.1 Protein Homology CDS 15186 15368 . - 0 ID=cds-LVR01_09405;Parent=gene-LVR01_09405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_09405;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000044.1 1 14880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000044.1 Genbank region 1 14880 . + . ID=JAJSBG010000044.1:1..14880;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000044.1 Genbank gene 124 1224 . - . ID=gene-LVR01_09410;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LVR01_09410 JAJSBG010000044.1 Protein Homology CDS 124 1224 . - 0 ID=cds-MCE2619418.1;Parent=gene-LVR01_09410;Dbxref=NCBI_GP:MCE2619418.1;Name=MCE2619418.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014634450.1;locus_tag=LVR01_09410;product=UDP-galactopyranose mutase;protein_id=MCE2619418.1;transl_table=11 JAJSBG010000044.1 Genbank pseudogene 1513 3464 . - . ID=gene-LVR01_09415;Name=LVR01_09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09415;pseudo=true JAJSBG010000044.1 Protein Homology CDS 1513 3464 . - 0 ID=cds-LVR01_09415;Parent=gene-LVR01_09415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093127.1;locus_tag=LVR01_09415;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAJSBG010000044.1 Genbank gene 3660 5267 . - . ID=gene-LVR01_09420;Name=LVR01_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09420 JAJSBG010000044.1 Protein Homology CDS 3660 5267 . - 0 ID=cds-MCE2619419.1;Parent=gene-LVR01_09420;Dbxref=NCBI_GP:MCE2619419.1;Name=MCE2619419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862907.1;locus_tag=LVR01_09420;product=alpha-glucosidase;protein_id=MCE2619419.1;transl_table=11 JAJSBG010000044.1 Genbank gene 5420 6904 . + . ID=gene-LVR01_09425;Name=LVR01_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09425 JAJSBG010000044.1 Protein Homology CDS 5420 6904 . + 0 ID=cds-MCE2619420.1;Parent=gene-LVR01_09425;Dbxref=NCBI_GP:MCE2619420.1;Name=MCE2619420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535024.1;locus_tag=LVR01_09425;product=DUF1846 domain-containing protein;protein_id=MCE2619420.1;transl_table=11 JAJSBG010000044.1 Genbank gene 6999 7481 . + . ID=gene-LVR01_09430;Name=LVR01_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09430 JAJSBG010000044.1 Protein Homology CDS 6999 7481 . + 0 ID=cds-MCE2619421.1;Parent=gene-LVR01_09430;Dbxref=NCBI_GP:MCE2619421.1;Name=MCE2619421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893508.1;locus_tag=LVR01_09430;product=S-ribosylhomocysteine lyase;protein_id=MCE2619421.1;transl_table=11 JAJSBG010000044.1 Genbank gene 7777 9882 . - . ID=gene-LVR01_09435;Name=LVR01_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09435 JAJSBG010000044.1 Protein Homology CDS 7777 9882 . - 0 ID=cds-MCE2619422.1;Parent=gene-LVR01_09435;Dbxref=NCBI_GP:MCE2619422.1;Name=MCE2619422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063457.1;locus_tag=LVR01_09435;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCE2619422.1;transl_table=11 JAJSBG010000044.1 Genbank gene 10222 11202 . - . ID=gene-LVR01_09440;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LVR01_09440 JAJSBG010000044.1 Protein Homology CDS 10222 11202 . - 0 ID=cds-MCE2619423.1;Parent=gene-LVR01_09440;Dbxref=NCBI_GP:MCE2619423.1;Name=MCE2619423.1;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470804.1;locus_tag=LVR01_09440;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=MCE2619423.1;transl_table=11 JAJSBG010000044.1 Genbank gene 11204 13456 . - . ID=gene-LVR01_09445;Name=pbp2X;gbkey=Gene;gene=pbp2X;gene_biotype=protein_coding;gene_synonym=pbpX;locus_tag=LVR01_09445 JAJSBG010000044.1 Protein Homology CDS 11204 13456 . - 0 ID=cds-MCE2619424.1;Parent=gene-LVR01_09445;Dbxref=NCBI_GP:MCE2619424.1;Name=MCE2619424.1;gbkey=CDS;gene=pbp2X;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872287.1;locus_tag=LVR01_09445;product=penicillin-binding protein 2X;protein_id=MCE2619424.1;transl_table=11 JAJSBG010000044.1 Genbank gene 13460 13777 . - . ID=gene-LVR01_09450;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LVR01_09450 JAJSBG010000044.1 Protein Homology CDS 13460 13777 . - 0 ID=cds-MCE2619425.1;Parent=gene-LVR01_09450;Dbxref=NCBI_GP:MCE2619425.1;Name=MCE2619425.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840841.1;locus_tag=LVR01_09450;product=cell division protein FtsL;protein_id=MCE2619425.1;transl_table=11 JAJSBG010000044.1 Genbank gene 13789 14739 . - . ID=gene-LVR01_09455;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LVR01_09455 JAJSBG010000044.1 Protein Homology CDS 13789 14739 . - 0 ID=cds-MCE2619426.1;Parent=gene-LVR01_09455;Dbxref=NCBI_GP:MCE2619426.1;Name=MCE2619426.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466808.1;locus_tag=LVR01_09455;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=MCE2619426.1;transl_table=11 ##sequence-region JAJSBG010000045.1 1 14689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000045.1 Genbank region 1 14689 . + . ID=JAJSBG010000045.1:1..14689;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000045.1 Genbank pseudogene 1 1192 . - . ID=gene-LVR01_09460;Name=LVR01_09460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09460;pseudo=true JAJSBG010000045.1 Protein Homology CDS 1 1192 . - 0 ID=cds-LVR01_09460;Parent=gene-LVR01_09460;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136121.1;locus_tag=LVR01_09460;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 JAJSBG010000045.1 Genbank gene 1206 1811 . - . ID=gene-LVR01_09465;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LVR01_09465 JAJSBG010000045.1 Protein Homology CDS 1206 1811 . - 0 ID=cds-MCE2619427.1;Parent=gene-LVR01_09465;Dbxref=NCBI_GP:MCE2619427.1;Name=MCE2619427.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259526.1;locus_tag=LVR01_09465;product=dephospho-CoA kinase;protein_id=MCE2619427.1;transl_table=11 JAJSBG010000045.1 Genbank gene 1811 2635 . - . ID=gene-LVR01_09470;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LVR01_09470 JAJSBG010000045.1 Protein Homology CDS 1811 2635 . - 0 ID=cds-MCE2619428.1;Parent=gene-LVR01_09470;Dbxref=NCBI_GP:MCE2619428.1;Name=MCE2619428.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114577.1;locus_tag=LVR01_09470;product=DNA-formamidopyrimidine glycosylase;protein_id=MCE2619428.1;transl_table=11 JAJSBG010000045.1 Genbank gene 2684 3583 . - . ID=gene-LVR01_09475;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LVR01_09475 JAJSBG010000045.1 Protein Homology CDS 2684 3583 . - 0 ID=cds-MCE2619429.1;Parent=gene-LVR01_09475;Dbxref=NCBI_GP:MCE2619429.1;Name=MCE2619429.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935752.1;locus_tag=LVR01_09475;product=GTPase Era;protein_id=MCE2619429.1;transl_table=11 JAJSBG010000045.1 Genbank gene 3600 3995 . - . ID=gene-LVR01_09480;Name=LVR01_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09480 JAJSBG010000045.1 Protein Homology CDS 3600 3995 . - 0 ID=cds-MCE2619430.1;Parent=gene-LVR01_09480;Dbxref=NCBI_GP:MCE2619430.1;Name=MCE2619430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000378166.1;locus_tag=LVR01_09480;product=diacylglycerol kinase;protein_id=MCE2619430.1;transl_table=11 JAJSBG010000045.1 Genbank gene 3976 4473 . - . ID=gene-LVR01_09485;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LVR01_09485 JAJSBG010000045.1 Protein Homology CDS 3976 4473 . - 0 ID=cds-MCE2619431.1;Parent=gene-LVR01_09485;Dbxref=NCBI_GP:MCE2619431.1;Name=MCE2619431.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=LVR01_09485;product=rRNA maturation RNase YbeY;protein_id=MCE2619431.1;transl_table=11 JAJSBG010000045.1 Genbank gene 4578 6233 . + . ID=gene-LVR01_09490;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=LVR01_09490 JAJSBG010000045.1 Protein Homology CDS 4578 6233 . + 0 ID=cds-MCE2619432.1;Parent=gene-LVR01_09490;Dbxref=NCBI_GP:MCE2619432.1;Name=MCE2619432.1;gbkey=CDS;gene=pavA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_094859469.1;locus_tag=LVR01_09490;product=Rqc2 family fibronectin-binding protein PavA;protein_id=MCE2619432.1;transl_table=11 JAJSBG010000045.1 Genbank gene 6294 8063 . - . ID=gene-LVR01_09495;Name=LVR01_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09495 JAJSBG010000045.1 Protein Homology CDS 6294 8063 . - 0 ID=cds-MCE2619433.1;Parent=gene-LVR01_09495;Dbxref=NCBI_GP:MCE2619433.1;Name=MCE2619433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976495.1;locus_tag=LVR01_09495;product=glucosaminidase domain-containing protein;protein_id=MCE2619433.1;transl_table=11 JAJSBG010000045.1 Genbank gene 8105 9043 . - . ID=gene-LVR01_09500;Name=LVR01_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09500 JAJSBG010000045.1 Protein Homology CDS 8105 9043 . - 0 ID=cds-MCE2619434.1;Parent=gene-LVR01_09500;Dbxref=NCBI_GP:MCE2619434.1;Name=MCE2619434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210709.1;locus_tag=LVR01_09500;product=dihydroorotate dehydrogenase;protein_id=MCE2619434.1;transl_table=11 JAJSBG010000045.1 Genbank gene 9054 9854 . - . ID=gene-LVR01_09505;Name=LVR01_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09505 JAJSBG010000045.1 Protein Homology CDS 9054 9854 . - 0 ID=cds-MCE2619435.1;Parent=gene-LVR01_09505;Dbxref=NCBI_GP:MCE2619435.1;Name=MCE2619435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254684.1;locus_tag=LVR01_09505;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=MCE2619435.1;transl_table=11 JAJSBG010000045.1 Genbank gene 10104 10484 . - . ID=gene-LVR01_09510;Name=LVR01_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09510 JAJSBG010000045.1 Protein Homology CDS 10104 10484 . - 0 ID=cds-MCE2619436.1;Parent=gene-LVR01_09510;Dbxref=NCBI_GP:MCE2619436.1;Name=MCE2619436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398837.1;locus_tag=LVR01_09510;product=VOC family protein;protein_id=MCE2619436.1;transl_table=11 JAJSBG010000045.1 Genbank gene 10542 10901 . - . ID=gene-LVR01_09515;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LVR01_09515 JAJSBG010000045.1 Protein Homology CDS 10542 10901 . - 0 ID=cds-MCE2619437.1;Parent=gene-LVR01_09515;Dbxref=NCBI_GP:MCE2619437.1;Name=MCE2619437.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=LVR01_09515;product=50S ribosomal protein L20;protein_id=MCE2619437.1;transl_table=11 JAJSBG010000045.1 Genbank gene 10953 11153 . - . ID=gene-LVR01_09520;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LVR01_09520 JAJSBG010000045.1 Protein Homology CDS 10953 11153 . - 0 ID=cds-MCE2619438.1;Parent=gene-LVR01_09520;Dbxref=NCBI_GP:MCE2619438.1;Name=MCE2619438.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=LVR01_09520;product=50S ribosomal protein L35;protein_id=MCE2619438.1;transl_table=11 JAJSBG010000045.1 Genbank gene 11186 11716 . - . ID=gene-LVR01_09525;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LVR01_09525 JAJSBG010000045.1 Protein Homology CDS 11186 11716 . - 0 ID=cds-MCE2619439.1;Parent=gene-LVR01_09525;Dbxref=NCBI_GP:MCE2619439.1;Name=MCE2619439.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848185.1;locus_tag=LVR01_09525;product=translation initiation factor IF-3;protein_id=MCE2619439.1;transl_table=11 JAJSBG010000045.1 cmsearch sequence_feature 11732 11863 . - . ID=id-JAJSBG010000045.1:11732..11863;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000045.1 Genbank gene 12027 13211 . - . ID=gene-LVR01_09530;Name=LVR01_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09530 JAJSBG010000045.1 Protein Homology CDS 12027 13211 . - 0 ID=cds-MCE2619440.1;Parent=gene-LVR01_09530;Dbxref=NCBI_GP:MCE2619440.1;Name=MCE2619440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655960.1;locus_tag=LVR01_09530;product=hypothetical protein;protein_id=MCE2619440.1;transl_table=11 JAJSBG010000045.1 Genbank gene 13208 13801 . - . ID=gene-LVR01_09535;Name=LVR01_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09535 JAJSBG010000045.1 Protein Homology CDS 13208 13801 . - 0 ID=cds-MCE2619441.1;Parent=gene-LVR01_09535;Dbxref=NCBI_GP:MCE2619441.1;Name=MCE2619441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397557.1;locus_tag=LVR01_09535;product=ABC transporter ATP-binding protein;protein_id=MCE2619441.1;transl_table=11 JAJSBG010000045.1 Genbank gene 13834 14052 . - . ID=gene-LVR01_09540;Name=LVR01_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09540 JAJSBG010000045.1 Protein Homology CDS 13834 14052 . - 0 ID=cds-MCE2619442.1;Parent=gene-LVR01_09540;Dbxref=NCBI_GP:MCE2619442.1;Name=MCE2619442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000948776.1;locus_tag=LVR01_09540;product=hypothetical protein;protein_id=MCE2619442.1;transl_table=11 JAJSBG010000045.1 Genbank gene 14198 14689 . - . ID=gene-LVR01_09545;Name=LVR01_09545;end_range=14689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09545;partial=true JAJSBG010000045.1 Protein Homology CDS 14198 14689 . - 0 ID=cds-MCE2619443.1;Parent=gene-LVR01_09545;Dbxref=NCBI_GP:MCE2619443.1;Name=MCE2619443.1;end_range=14689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_09545;partial=true;product=transposase;protein_id=MCE2619443.1;transl_table=11 ##sequence-region JAJSBG010000046.1 1 14417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000046.1 Genbank region 1 14417 . + . ID=JAJSBG010000046.1:1..14417;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000046.1 Genbank gene 308 886 . + . ID=gene-LVR01_09550;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=LVR01_09550 JAJSBG010000046.1 Protein Homology CDS 308 886 . + 0 ID=cds-MCE2619444.1;Parent=gene-LVR01_09550;Dbxref=NCBI_GP:MCE2619444.1;Name=MCE2619444.1;gbkey=CDS;gene=pduL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405172.1;locus_tag=LVR01_09550;product=phosphate propanoyltransferase;protein_id=MCE2619444.1;transl_table=11 JAJSBG010000046.1 Genbank gene 906 1697 . + . ID=gene-LVR01_09555;Name=LVR01_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09555 JAJSBG010000046.1 Protein Homology CDS 906 1697 . + 0 ID=cds-MCE2619445.1;Parent=gene-LVR01_09555;Dbxref=NCBI_GP:MCE2619445.1;Name=MCE2619445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599441.1;locus_tag=LVR01_09555;product=ABC transporter permease;protein_id=MCE2619445.1;transl_table=11 JAJSBG010000046.1 Genbank gene 1824 2213 . + . ID=gene-LVR01_09560;Name=LVR01_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09560 JAJSBG010000046.1 Protein Homology CDS 1824 2213 . + 0 ID=cds-MCE2619446.1;Parent=gene-LVR01_09560;Dbxref=NCBI_GP:MCE2619446.1;Name=MCE2619446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LVR01_09560;product=ATP-binding cassette domain-containing protein;protein_id=MCE2619446.1;transl_table=11 JAJSBG010000046.1 Genbank pseudogene 2469 2640 . + . ID=gene-LVR01_09565;Name=LVR01_09565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09565;pseudo=true JAJSBG010000046.1 Protein Homology CDS 2469 2640 . + 0 ID=cds-LVR01_09565;Parent=gene-LVR01_09565;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_09565;product=IS630 family transposase;pseudo=true;transl_table=11 JAJSBG010000046.1 Genbank pseudogene 2836 3520 . + . ID=gene-LVR01_09570;Name=LVR01_09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09570;pseudo=true JAJSBG010000046.1 Protein Homology CDS 2836 3520 . + 0 ID=cds-LVR01_09570;Parent=gene-LVR01_09570;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_09570;product=IS630 family transposase;pseudo=true;transl_table=11 JAJSBG010000046.1 Genbank gene 3729 4604 . + . ID=gene-LVR01_09575;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=LVR01_09575 JAJSBG010000046.1 Protein Homology CDS 3729 4604 . + 0 ID=cds-MCE2619447.1;Parent=gene-LVR01_09575;Dbxref=NCBI_GP:MCE2619447.1;Name=MCE2619447.1;gbkey=CDS;gene=pdxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054698.1;locus_tag=LVR01_09575;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=MCE2619447.1;transl_table=11 JAJSBG010000046.1 Genbank gene 4605 5186 . + . ID=gene-LVR01_09580;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=LVR01_09580 JAJSBG010000046.1 Protein Homology CDS 4605 5186 . + 0 ID=cds-MCE2619448.1;Parent=gene-LVR01_09580;Dbxref=NCBI_GP:MCE2619448.1;Name=MCE2619448.1;gbkey=CDS;gene=pdxT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689934.1;locus_tag=LVR01_09580;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=MCE2619448.1;transl_table=11 JAJSBG010000046.1 Genbank gene 5426 6073 . - . ID=gene-LVR01_09585;Name=LVR01_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09585 JAJSBG010000046.1 Protein Homology CDS 5426 6073 . - 0 ID=cds-MCE2619449.1;Parent=gene-LVR01_09585;Dbxref=NCBI_GP:MCE2619449.1;Name=MCE2619449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097995.1;locus_tag=LVR01_09585;product=hemolysin III family protein;protein_id=MCE2619449.1;transl_table=11 JAJSBG010000046.1 Genbank gene 6070 6516 . - . ID=gene-LVR01_09590;Name=LVR01_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09590 JAJSBG010000046.1 Protein Homology CDS 6070 6516 . - 0 ID=cds-MCE2619450.1;Parent=gene-LVR01_09590;Dbxref=NCBI_GP:MCE2619450.1;Name=MCE2619450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858725.1;locus_tag=LVR01_09590;product=DUF1836 domain-containing protein;protein_id=MCE2619450.1;transl_table=11 JAJSBG010000046.1 Genbank gene 6651 7145 . + . ID=gene-LVR01_09595;Name=LVR01_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09595 JAJSBG010000046.1 Protein Homology CDS 6651 7145 . + 0 ID=cds-MCE2619451.1;Parent=gene-LVR01_09595;Dbxref=NCBI_GP:MCE2619451.1;Name=MCE2619451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405845.1;locus_tag=LVR01_09595;product=GNAT family N-acetyltransferase;protein_id=MCE2619451.1;transl_table=11 JAJSBG010000046.1 Genbank gene 7145 7663 . + . ID=gene-LVR01_09600;Name=LVR01_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09600 JAJSBG010000046.1 Protein Homology CDS 7145 7663 . + 0 ID=cds-MCE2619452.1;Parent=gene-LVR01_09600;Dbxref=NCBI_GP:MCE2619452.1;Name=MCE2619452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397453.1;locus_tag=LVR01_09600;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=MCE2619452.1;transl_table=11 JAJSBG010000046.1 Genbank gene 7669 8025 . + . ID=gene-LVR01_09605;Name=LVR01_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09605 JAJSBG010000046.1 Protein Homology CDS 7669 8025 . + 0 ID=cds-MCE2619453.1;Parent=gene-LVR01_09605;Dbxref=NCBI_GP:MCE2619453.1;Name=MCE2619453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889075.1;locus_tag=LVR01_09605;product=arsenate reductase family protein;protein_id=MCE2619453.1;transl_table=11 JAJSBG010000046.1 Genbank gene 8183 8983 . + . ID=gene-LVR01_09610;Name=LVR01_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09610 JAJSBG010000046.1 Protein Homology CDS 8183 8983 . + 0 ID=cds-MCE2619454.1;Parent=gene-LVR01_09610;Dbxref=NCBI_GP:MCE2619454.1;Name=MCE2619454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103446.1;locus_tag=LVR01_09610;product=amino acid ABC transporter permease;protein_id=MCE2619454.1;transl_table=11 JAJSBG010000046.1 Genbank gene 8983 9726 . + . ID=gene-LVR01_09615;Name=LVR01_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09615 JAJSBG010000046.1 Protein Homology CDS 8983 9726 . + 0 ID=cds-MCE2619455.1;Parent=gene-LVR01_09615;Dbxref=NCBI_GP:MCE2619455.1;Name=MCE2619455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397450.1;locus_tag=LVR01_09615;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2619455.1;transl_table=11 JAJSBG010000046.1 Genbank gene 9804 10028 . + . ID=gene-LVR01_09620;Name=LVR01_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09620 JAJSBG010000046.1 Protein Homology CDS 9804 10028 . + 0 ID=cds-MCE2619456.1;Parent=gene-LVR01_09620;Dbxref=NCBI_GP:MCE2619456.1;Name=MCE2619456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924294.1;locus_tag=LVR01_09620;product=DUF4059 family protein;protein_id=MCE2619456.1;transl_table=11 JAJSBG010000046.1 Genbank gene 10094 11005 . + . ID=gene-LVR01_09625;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LVR01_09625 JAJSBG010000046.1 Protein Homology CDS 10094 11005 . + 0 ID=cds-MCE2619457.1;Parent=gene-LVR01_09625;Dbxref=NCBI_GP:MCE2619457.1;Name=MCE2619457.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001847397.1;locus_tag=LVR01_09625;product=thioredoxin-disulfide reductase;protein_id=MCE2619457.1;transl_table=11 JAJSBG010000046.1 Genbank gene 11044 11772 . - . ID=gene-LVR01_09630;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LVR01_09630 JAJSBG010000046.1 Protein Homology CDS 11044 11772 . - 0 ID=cds-MCE2619458.1;Parent=gene-LVR01_09630;Dbxref=NCBI_GP:MCE2619458.1;Name=MCE2619458.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006151108.1;locus_tag=LVR01_09630;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=MCE2619458.1;transl_table=11 JAJSBG010000046.1 Genbank gene 11817 12428 . - . ID=gene-LVR01_09635;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LVR01_09635 JAJSBG010000046.1 Protein Homology CDS 11817 12428 . - 0 ID=cds-MCE2619459.1;Parent=gene-LVR01_09635;Dbxref=NCBI_GP:MCE2619459.1;Name=MCE2619459.1;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058782.1;locus_tag=LVR01_09635;product=peptide deformylase;protein_id=MCE2619459.1;transl_table=11 JAJSBG010000046.1 Genbank gene 13021 14073 . + . ID=gene-LVR01_09640;Name=LVR01_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09640 JAJSBG010000046.1 Protein Homology CDS 13021 14073 . + 0 ID=cds-MCE2619460.1;Parent=gene-LVR01_09640;Dbxref=NCBI_GP:MCE2619460.1;Name=MCE2619460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.2;locus_tag=LVR01_09640;product=CapA family protein;protein_id=MCE2619460.1;transl_table=11 JAJSBG010000046.1 Genbank pseudogene 14118 14417 . + . ID=gene-LVR01_09645;Name=LVR01_09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09645;pseudo=true JAJSBG010000046.1 Protein Homology CDS 14118 14417 . + 0 ID=cds-LVR01_09645;Parent=gene-LVR01_09645;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_09645;product=transposase family protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000047.1 1 12800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000047.1 Genbank region 1 12800 . + . ID=JAJSBG010000047.1:1..12800;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000047.1 Genbank gene 161 1105 . + . ID=gene-LVR01_09650;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=LVR01_09650 JAJSBG010000047.1 Protein Homology CDS 161 1105 . + 0 ID=cds-MCE2619461.1;Parent=gene-LVR01_09650;Dbxref=NCBI_GP:MCE2619461.1;Name=MCE2619461.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122710.1;locus_tag=LVR01_09650;product=homoserine O-succinyltransferase;protein_id=MCE2619461.1;transl_table=11 JAJSBG010000047.1 Genbank gene 1114 1791 . + . ID=gene-LVR01_09655;Name=LVR01_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09655 JAJSBG010000047.1 Protein Homology CDS 1114 1791 . + 0 ID=cds-MCE2619462.1;Parent=gene-LVR01_09655;Dbxref=NCBI_GP:MCE2619462.1;Name=MCE2619462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864007.1;locus_tag=LVR01_09655;product=DnaD domain-containing protein;protein_id=MCE2619462.1;transl_table=11 JAJSBG010000047.1 Genbank gene 1889 2647 . + . ID=gene-LVR01_09660;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LVR01_09660 JAJSBG010000047.1 Protein Homology CDS 1889 2647 . + 0 ID=cds-MCE2619463.1;Parent=gene-LVR01_09660;Dbxref=NCBI_GP:MCE2619463.1;Name=MCE2619463.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087908.1;locus_tag=LVR01_09660;product=triose-phosphate isomerase;protein_id=MCE2619463.1;transl_table=11 JAJSBG010000047.1 Genbank gene 2685 4175 . + . ID=gene-LVR01_09665;Name=lytC;gbkey=Gene;gene=lytC;gene_biotype=protein_coding;locus_tag=LVR01_09665 JAJSBG010000047.1 Protein Homology CDS 2685 4175 . + 0 ID=cds-MCE2619464.1;Parent=gene-LVR01_09665;Dbxref=NCBI_GP:MCE2619464.1;Name=MCE2619464.1;gbkey=CDS;gene=lytC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078138769.1;locus_tag=LVR01_09665;product=choline binding-anchored murein hydrolase LytC;protein_id=MCE2619464.1;transl_table=11 JAJSBG010000047.1 Genbank gene 4286 4444 . + . ID=gene-LVR01_09670;Name=LVR01_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09670 JAJSBG010000047.1 GeneMarkS-2+ CDS 4286 4444 . + 0 ID=cds-MCE2619465.1;Parent=gene-LVR01_09670;Dbxref=NCBI_GP:MCE2619465.1;Name=MCE2619465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_09670;product=hypothetical protein;protein_id=MCE2619465.1;transl_table=11 JAJSBG010000047.1 Genbank gene 4826 5344 . + . ID=gene-LVR01_09675;Name=LVR01_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09675 JAJSBG010000047.1 Protein Homology CDS 4826 5344 . + 0 ID=cds-MCE2619466.1;Parent=gene-LVR01_09675;Dbxref=NCBI_GP:MCE2619466.1;Name=MCE2619466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229877.1;locus_tag=LVR01_09675;product=DNA starvation/stationary phase protection protein;protein_id=MCE2619466.1;transl_table=11 JAJSBG010000047.1 Genbank gene 5474 5980 . + . ID=gene-LVR01_09680;Name=LVR01_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09680 JAJSBG010000047.1 Protein Homology CDS 5474 5980 . + 0 ID=cds-MCE2619467.1;Parent=gene-LVR01_09680;Dbxref=NCBI_GP:MCE2619467.1;Name=MCE2619467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162460.1;locus_tag=LVR01_09680;product=dihydrofolate reductase;protein_id=MCE2619467.1;transl_table=11 JAJSBG010000047.1 Genbank gene 5980 6150 . + . ID=gene-LVR01_09685;Name=LVR01_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09685 JAJSBG010000047.1 Protein Homology CDS 5980 6150 . + 0 ID=cds-MCE2619468.1;Parent=gene-LVR01_09685;Dbxref=NCBI_GP:MCE2619468.1;Name=MCE2619468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442275.1;locus_tag=LVR01_09685;product=hypothetical protein;protein_id=MCE2619468.1;transl_table=11 JAJSBG010000047.1 Genbank gene 6182 7414 . + . ID=gene-LVR01_09690;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LVR01_09690 JAJSBG010000047.1 Protein Homology CDS 6182 7414 . + 0 ID=cds-MCE2619469.1;Parent=gene-LVR01_09690;Dbxref=NCBI_GP:MCE2619469.1;Name=MCE2619469.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874765.1;locus_tag=LVR01_09690;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=MCE2619469.1;transl_table=11 JAJSBG010000047.1 Genbank gene 7423 8010 . + . ID=gene-LVR01_09695;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LVR01_09695 JAJSBG010000047.1 Protein Homology CDS 7423 8010 . + 0 ID=cds-MCE2619470.1;Parent=gene-LVR01_09695;Dbxref=NCBI_GP:MCE2619470.1;Name=MCE2619470.1;gbkey=CDS;gene=yihA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915299.1;locus_tag=LVR01_09695;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=MCE2619470.1;transl_table=11 JAJSBG010000047.1 Genbank gene 8021 8401 . + . ID=gene-LVR01_09700;Name=LVR01_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09700 JAJSBG010000047.1 Protein Homology CDS 8021 8401 . + 0 ID=cds-MCE2619471.1;Parent=gene-LVR01_09700;Dbxref=NCBI_GP:MCE2619471.1;Name=MCE2619471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140413.1;locus_tag=LVR01_09700;product=RidA family protein;protein_id=MCE2619471.1;transl_table=11 JAJSBG010000047.1 Genbank gene 8453 9343 . + . ID=gene-LVR01_09705;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LVR01_09705 JAJSBG010000047.1 Protein Homology CDS 8453 9343 . + 0 ID=cds-MCE2619472.1;Parent=gene-LVR01_09705;Dbxref=NCBI_GP:MCE2619472.1;Name=MCE2619472.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163059.1;locus_tag=LVR01_09705;product=RNase adapter RapZ;protein_id=MCE2619472.1;transl_table=11 JAJSBG010000047.1 Genbank gene 9340 10317 . + . ID=gene-LVR01_09710;Name=LVR01_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09710 JAJSBG010000047.1 Protein Homology CDS 9340 10317 . + 0 ID=cds-MCE2619473.1;Parent=gene-LVR01_09710;Dbxref=NCBI_GP:MCE2619473.1;Name=MCE2619473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399181.1;locus_tag=LVR01_09710;product=YvcK family protein;protein_id=MCE2619473.1;transl_table=11 JAJSBG010000047.1 Genbank gene 10314 11225 . + . ID=gene-LVR01_09715;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=LVR01_09715 JAJSBG010000047.1 Protein Homology CDS 10314 11225 . + 0 ID=cds-MCE2619474.1;Parent=gene-LVR01_09715;Dbxref=NCBI_GP:MCE2619474.1;Name=MCE2619474.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257845.1;locus_tag=LVR01_09715;product=DNA-binding protein WhiA;protein_id=MCE2619474.1;transl_table=11 JAJSBG010000047.1 Genbank gene 11313 12440 . - . ID=gene-LVR01_09720;Name=LVR01_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09720 JAJSBG010000047.1 Protein Homology CDS 11313 12440 . - 0 ID=cds-MCE2619475.1;Parent=gene-LVR01_09720;Dbxref=NCBI_GP:MCE2619475.1;Name=MCE2619475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266845.1;locus_tag=LVR01_09720;product=site-specific integrase;protein_id=MCE2619475.1;transl_table=11 ##sequence-region JAJSBG010000048.1 1 12395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000048.1 Genbank region 1 12395 . + . ID=JAJSBG010000048.1:1..12395;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000048.1 Genbank gene 79 225 . - . ID=gene-LVR01_09725;Name=LVR01_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09725 JAJSBG010000048.1 Protein Homology CDS 79 225 . - 0 ID=cds-MCE2619476.1;Parent=gene-LVR01_09725;Dbxref=NCBI_GP:MCE2619476.1;Name=MCE2619476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770987.1;locus_tag=LVR01_09725;product=hypothetical protein;protein_id=MCE2619476.1;transl_table=11 JAJSBG010000048.1 Genbank gene 522 974 . - . ID=gene-LVR01_09730;Name=LVR01_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09730 JAJSBG010000048.1 Protein Homology CDS 522 974 . - 0 ID=cds-MCE2619477.1;Parent=gene-LVR01_09730;Dbxref=NCBI_GP:MCE2619477.1;Name=MCE2619477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394498.1;locus_tag=LVR01_09730;product=hypothetical protein;protein_id=MCE2619477.1;transl_table=11 JAJSBG010000048.1 Genbank gene 988 4065 . - . ID=gene-LVR01_09735;Name=LVR01_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09735 JAJSBG010000048.1 Protein Homology CDS 988 4065 . - 0 ID=cds-MCE2619478.1;Parent=gene-LVR01_09735;Dbxref=NCBI_GP:MCE2619478.1;Name=MCE2619478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239261.1;locus_tag=LVR01_09735;product=DEAD/DEAH box helicase family protein;protein_id=MCE2619478.1;transl_table=11 JAJSBG010000048.1 Genbank gene 4097 4801 . - . ID=gene-LVR01_09740;Name=LVR01_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09740 JAJSBG010000048.1 Protein Homology CDS 4097 4801 . - 0 ID=cds-MCE2619479.1;Parent=gene-LVR01_09740;Dbxref=NCBI_GP:MCE2619479.1;Name=MCE2619479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037207.2;locus_tag=LVR01_09740;product=SLATT domain-containing protein;protein_id=MCE2619479.1;transl_table=11 JAJSBG010000048.1 Genbank gene 4803 6506 . - . ID=gene-LVR01_09745;Name=LVR01_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09745 JAJSBG010000048.1 Protein Homology CDS 4803 6506 . - 0 ID=cds-MCE2619480.1;Parent=gene-LVR01_09745;Dbxref=NCBI_GP:MCE2619480.1;Name=MCE2619480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349001.1;locus_tag=LVR01_09745;product=site-specific DNA-methyltransferase;protein_id=MCE2619480.1;transl_table=11 JAJSBG010000048.1 Genbank gene 7157 8728 . - . ID=gene-LVR01_09750;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LVR01_09750 JAJSBG010000048.1 Protein Homology CDS 7157 8728 . - 0 ID=cds-MCE2619481.1;Parent=gene-LVR01_09750;Dbxref=NCBI_GP:MCE2619481.1;Name=MCE2619481.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863601.1;locus_tag=LVR01_09750;product=signal recognition particle protein;protein_id=MCE2619481.1;transl_table=11 JAJSBG010000048.1 Genbank gene 8740 9072 . - . ID=gene-LVR01_09755;Name=LVR01_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09755 JAJSBG010000048.1 Protein Homology CDS 8740 9072 . - 0 ID=cds-MCE2619482.1;Parent=gene-LVR01_09755;Dbxref=NCBI_GP:MCE2619482.1;Name=MCE2619482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637934.1;locus_tag=LVR01_09755;product=putative DNA-binding protein;protein_id=MCE2619482.1;transl_table=11 JAJSBG010000048.1 Genbank gene 9163 9540 . - . ID=gene-LVR01_09760;Name=LVR01_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09760 JAJSBG010000048.1 Protein Homology CDS 9163 9540 . - 0 ID=cds-MCE2619483.1;Parent=gene-LVR01_09760;Dbxref=NCBI_GP:MCE2619483.1;Name=MCE2619483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701643.1;locus_tag=LVR01_09760;product=DUF1934 domain-containing protein;protein_id=MCE2619483.1;transl_table=11 JAJSBG010000048.1 Genbank gene 9612 10916 . + . ID=gene-LVR01_09765;Name=LVR01_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09765 JAJSBG010000048.1 Protein Homology CDS 9612 10916 . + 0 ID=cds-MCE2619484.1;Parent=gene-LVR01_09765;Dbxref=NCBI_GP:MCE2619484.1;Name=MCE2619484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003495.1;locus_tag=LVR01_09765;product=HD domain-containing protein;protein_id=MCE2619484.1;transl_table=11 JAJSBG010000048.1 Genbank gene 10929 11735 . + . ID=gene-LVR01_09770;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LVR01_09770 JAJSBG010000048.1 Protein Homology CDS 10929 11735 . + 0 ID=cds-MCE2619485.1;Parent=gene-LVR01_09770;Dbxref=NCBI_GP:MCE2619485.1;Name=MCE2619485.1;gbkey=CDS;gene=yidA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023490.1;locus_tag=LVR01_09770;product=sugar-phosphatase;protein_id=MCE2619485.1;transl_table=11 JAJSBG010000048.1 Genbank pseudogene 11935 12049 . - . ID=gene-LVR01_09775;Name=LVR01_09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09775;pseudo=true JAJSBG010000048.1 Protein Homology CDS 11935 12049 . - 0 ID=cds-LVR01_09775;Parent=gene-LVR01_09775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518847.1;locus_tag=LVR01_09775;product=site-specific integrase;pseudo=true;transl_table=11 JAJSBG010000048.1 Genbank pseudogene 12085 12395 . + . ID=gene-LVR01_09780;Name=LVR01_09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_09780;pseudo=true JAJSBG010000048.1 Protein Homology CDS 12085 12395 . + 0 ID=cds-LVR01_09780;Parent=gene-LVR01_09780;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_09780;product=transposase family protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000049.1 1 12332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000049.1 Genbank region 1 12332 . + . ID=JAJSBG010000049.1:1..12332;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000049.1 Genbank gene 1 161 . - . ID=gene-LVR01_09785;Name=LVR01_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09785;partial=true;start_range=.,1 JAJSBG010000049.1 Protein Homology CDS 1 161 . - 0 ID=cds-MCE2619486.1;Parent=gene-LVR01_09785;Dbxref=NCBI_GP:MCE2619486.1;Name=MCE2619486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_09785;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCE2619486.1;start_range=.,1;transl_table=11 JAJSBG010000049.1 Genbank gene 324 1133 . - . ID=gene-LVR01_09790;Name=LVR01_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09790 JAJSBG010000049.1 Protein Homology CDS 324 1133 . - 0 ID=cds-MCE2619487.1;Parent=gene-LVR01_09790;Dbxref=NCBI_GP:MCE2619487.1;Name=MCE2619487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398977.1;locus_tag=LVR01_09790;product=purine-nucleoside phosphorylase;protein_id=MCE2619487.1;transl_table=11 JAJSBG010000049.1 Genbank gene 1130 1690 . - . ID=gene-LVR01_09795;Name=LVR01_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09795 JAJSBG010000049.1 Protein Homology CDS 1130 1690 . - 0 ID=cds-MCE2619488.1;Parent=gene-LVR01_09795;Dbxref=NCBI_GP:MCE2619488.1;Name=MCE2619488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000199123.1;locus_tag=LVR01_09795;product=DUF1697 domain-containing protein;protein_id=MCE2619488.1;transl_table=11 JAJSBG010000049.1 Genbank gene 1692 2903 . - . ID=gene-LVR01_09800;Name=LVR01_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09800 JAJSBG010000049.1 Protein Homology CDS 1692 2903 . - 0 ID=cds-MCE2619489.1;Parent=gene-LVR01_09800;Dbxref=NCBI_GP:MCE2619489.1;Name=MCE2619489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259464.1;locus_tag=LVR01_09800;product=phosphopentomutase;protein_id=MCE2619489.1;transl_table=11 JAJSBG010000049.1 Genbank gene 2917 3600 . - . ID=gene-LVR01_09805;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LVR01_09805 JAJSBG010000049.1 Protein Homology CDS 2917 3600 . - 0 ID=cds-MCE2619490.1;Parent=gene-LVR01_09805;Dbxref=NCBI_GP:MCE2619490.1;Name=MCE2619490.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429260.1;locus_tag=LVR01_09805;product=ribose-5-phosphate isomerase RpiA;protein_id=MCE2619490.1;transl_table=11 JAJSBG010000049.1 Genbank gene 3898 4737 . - . ID=gene-LVR01_09810;Name=LVR01_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09810 JAJSBG010000049.1 Protein Homology CDS 3898 4737 . - 0 ID=cds-MCE2619491.1;Parent=gene-LVR01_09810;Dbxref=NCBI_GP:MCE2619491.1;Name=MCE2619491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863087.1;locus_tag=LVR01_09810;product=NAD(P)H-hydrate dehydratase;protein_id=MCE2619491.1;transl_table=11 JAJSBG010000049.1 Genbank gene 4796 5569 . - . ID=gene-LVR01_09815;Name=LVR01_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09815 JAJSBG010000049.1 Protein Homology CDS 4796 5569 . - 0 ID=cds-MCE2619492.1;Parent=gene-LVR01_09815;Dbxref=NCBI_GP:MCE2619492.1;Name=MCE2619492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673607.1;locus_tag=LVR01_09815;product=HAD family hydrolase;protein_id=MCE2619492.1;transl_table=11 JAJSBG010000049.1 Genbank gene 5574 6431 . - . ID=gene-LVR01_09820;Name=LVR01_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09820 JAJSBG010000049.1 Protein Homology CDS 5574 6431 . - 0 ID=cds-MCE2619493.1;Parent=gene-LVR01_09820;Dbxref=NCBI_GP:MCE2619493.1;Name=MCE2619493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057224.1;locus_tag=LVR01_09820;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=MCE2619493.1;transl_table=11 JAJSBG010000049.1 Genbank gene 6585 7319 . - . ID=gene-LVR01_09825;Name=LVR01_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09825 JAJSBG010000049.1 Protein Homology CDS 6585 7319 . - 0 ID=cds-MCE2619494.1;Parent=gene-LVR01_09825;Dbxref=NCBI_GP:MCE2619494.1;Name=MCE2619494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140960.1;locus_tag=LVR01_09825;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2619494.1;transl_table=11 JAJSBG010000049.1 Genbank gene 7319 8002 . - . ID=gene-LVR01_09830;Name=LVR01_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09830 JAJSBG010000049.1 Protein Homology CDS 7319 8002 . - 0 ID=cds-MCE2619495.1;Parent=gene-LVR01_09830;Dbxref=NCBI_GP:MCE2619495.1;Name=MCE2619495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001011621.1;locus_tag=LVR01_09830;product=amino acid ABC transporter permease;protein_id=MCE2619495.1;transl_table=11 JAJSBG010000049.1 Genbank gene 8193 8423 . + . ID=gene-LVR01_09835;Name=LVR01_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09835 JAJSBG010000049.1 Protein Homology CDS 8193 8423 . + 0 ID=cds-MCE2619496.1;Parent=gene-LVR01_09835;Dbxref=NCBI_GP:MCE2619496.1;Name=MCE2619496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592360.1;locus_tag=LVR01_09835;product=DUF1797 family protein;protein_id=MCE2619496.1;transl_table=11 JAJSBG010000049.1 Genbank gene 8653 10911 . + . ID=gene-LVR01_09840;Name=LVR01_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09840 JAJSBG010000049.1 Protein Homology CDS 8653 10911 . + 0 ID=cds-MCE2619497.1;Parent=gene-LVR01_09840;Dbxref=NCBI_GP:MCE2619497.1;Name=MCE2619497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882511.1;locus_tag=LVR01_09840;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCE2619497.1;transl_table=11 JAJSBG010000049.1 Genbank gene 11040 11492 . + . ID=gene-LVR01_09845;Name=LVR01_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09845 JAJSBG010000049.1 Protein Homology CDS 11040 11492 . + 0 ID=cds-MCE2619498.1;Parent=gene-LVR01_09845;Dbxref=NCBI_GP:MCE2619498.1;Name=MCE2619498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013085.1;locus_tag=LVR01_09845;product=NUDIX hydrolase;protein_id=MCE2619498.1;transl_table=11 JAJSBG010000049.1 Genbank gene 11489 11635 . - . ID=gene-LVR01_09850;Name=LVR01_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09850 JAJSBG010000049.1 GeneMarkS-2+ CDS 11489 11635 . - 0 ID=cds-MCE2619499.1;Parent=gene-LVR01_09850;Dbxref=NCBI_GP:MCE2619499.1;Name=MCE2619499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_09850;product=hypothetical protein;protein_id=MCE2619499.1;transl_table=11 JAJSBG010000049.1 Genbank gene 11703 12002 . + . ID=gene-LVR01_09855;Name=LVR01_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09855 JAJSBG010000049.1 Protein Homology CDS 11703 12002 . + 0 ID=cds-MCE2619500.1;Parent=gene-LVR01_09855;Dbxref=NCBI_GP:MCE2619500.1;Name=MCE2619500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767202.1;locus_tag=LVR01_09855;product=DUF1827 family protein;protein_id=MCE2619500.1;transl_table=11 ##sequence-region JAJSBG010000004.1 1 79593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000004.1 Genbank region 1 79593 . + . ID=JAJSBG010000004.1:1..79593;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000004.1 Genbank gene 113 1618 . - . ID=gene-LVR01_02115;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LVR01_02115 JAJSBG010000004.1 Protein Homology CDS 113 1618 . - 0 ID=cds-MCE2618097.1;Parent=gene-LVR01_02115;Dbxref=NCBI_GP:MCE2618097.1;Name=MCE2618097.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809276.1;locus_tag=LVR01_02115;product=pyruvate kinase;protein_id=MCE2618097.1;transl_table=11 JAJSBG010000004.1 Genbank gene 1677 2684 . - . ID=gene-LVR01_02120;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LVR01_02120 JAJSBG010000004.1 Protein Homology CDS 1677 2684 . - 0 ID=cds-MCE2618098.1;Parent=gene-LVR01_02120;Dbxref=NCBI_GP:MCE2618098.1;Name=MCE2618098.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000820836.1;locus_tag=LVR01_02120;product=6-phosphofructokinase;protein_id=MCE2618098.1;transl_table=11 JAJSBG010000004.1 Genbank gene 2767 5868 . - . ID=gene-LVR01_02125;Name=LVR01_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02125 JAJSBG010000004.1 Protein Homology CDS 2767 5868 . - 0 ID=cds-MCE2618099.1;Parent=gene-LVR01_02125;Dbxref=NCBI_GP:MCE2618099.1;Name=MCE2618099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000561528.1;locus_tag=LVR01_02125;product=DNA polymerase III subunit alpha;protein_id=MCE2618099.1;transl_table=11 JAJSBG010000004.1 Genbank gene 6214 8487 . + . ID=gene-LVR01_02130;Name=LVR01_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02130 JAJSBG010000004.1 Protein Homology CDS 6214 8487 . + 0 ID=cds-MCE2618100.1;Parent=gene-LVR01_02130;Dbxref=NCBI_GP:MCE2618100.1;Name=MCE2618100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399325.1;locus_tag=LVR01_02130;product=Xaa-Pro dipeptidyl-peptidase;protein_id=MCE2618100.1;transl_table=11 JAJSBG010000004.1 Genbank gene 8504 8974 . + . ID=gene-LVR01_02135;Name=LVR01_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02135 JAJSBG010000004.1 Protein Homology CDS 8504 8974 . + 0 ID=cds-MCE2618101.1;Parent=gene-LVR01_02135;Dbxref=NCBI_GP:MCE2618101.1;Name=MCE2618101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043003.1;locus_tag=LVR01_02135;product=arginine repressor;protein_id=MCE2618101.1;transl_table=11 JAJSBG010000004.1 Genbank gene 9508 12858 . - . ID=gene-LVR01_02140;Name=LVR01_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02140 JAJSBG010000004.1 Protein Homology CDS 9508 12858 . - 0 ID=cds-MCE2618102.1;Parent=gene-LVR01_02140;Dbxref=NCBI_GP:MCE2618102.1;Name=MCE2618102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526318.1;locus_tag=LVR01_02140;product=DEAD/DEAH box helicase family protein;protein_id=MCE2618102.1;transl_table=11 JAJSBG010000004.1 Genbank gene 12888 13955 . - . ID=gene-LVR01_02145;Name=LVR01_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02145 JAJSBG010000004.1 Protein Homology CDS 12888 13955 . - 0 ID=cds-MCE2618103.1;Parent=gene-LVR01_02145;Dbxref=NCBI_GP:MCE2618103.1;Name=MCE2618103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152022.1;locus_tag=LVR01_02145;product=restriction endonuclease subunit S;protein_id=MCE2618103.1;transl_table=11 JAJSBG010000004.1 Genbank gene 13989 14954 . - . ID=gene-LVR01_02150;Name=LVR01_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02150 JAJSBG010000004.1 Protein Homology CDS 13989 14954 . - 0 ID=cds-MCE2618104.1;Parent=gene-LVR01_02150;Dbxref=NCBI_GP:MCE2618104.1;Name=MCE2618104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444451.1;locus_tag=LVR01_02150;product=tyrosine-type recombinase/integrase;protein_id=MCE2618104.1;transl_table=11 JAJSBG010000004.1 Genbank gene 15072 15485 . - . ID=gene-LVR01_02155;Name=LVR01_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02155 JAJSBG010000004.1 Protein Homology CDS 15072 15485 . - 0 ID=cds-MCE2618105.1;Parent=gene-LVR01_02155;Dbxref=NCBI_GP:MCE2618105.1;Name=MCE2618105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158364.1;locus_tag=LVR01_02155;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=MCE2618105.1;transl_table=11 JAJSBG010000004.1 Genbank gene 15482 15718 . - . ID=gene-LVR01_02160;Name=LVR01_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02160 JAJSBG010000004.1 Protein Homology CDS 15482 15718 . - 0 ID=cds-MCE2618106.1;Parent=gene-LVR01_02160;Dbxref=NCBI_GP:MCE2618106.1;Name=MCE2618106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000260605.1;locus_tag=LVR01_02160;product=AbrB family transcriptional regulator;protein_id=MCE2618106.1;transl_table=11 JAJSBG010000004.1 Genbank gene 15778 16899 . - . ID=gene-LVR01_02165;Name=LVR01_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02165 JAJSBG010000004.1 Protein Homology CDS 15778 16899 . - 0 ID=cds-MCE2618107.1;Parent=gene-LVR01_02165;Dbxref=NCBI_GP:MCE2618107.1;Name=MCE2618107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756162.1;locus_tag=LVR01_02165;product=restriction endonuclease subunit S;protein_id=MCE2618107.1;transl_table=11 JAJSBG010000004.1 Genbank gene 16912 18405 . - . ID=gene-LVR01_02170;Name=LVR01_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02170 JAJSBG010000004.1 Protein Homology CDS 16912 18405 . - 0 ID=cds-MCE2618108.1;Parent=gene-LVR01_02170;Dbxref=NCBI_GP:MCE2618108.1;Name=MCE2618108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627753.1;locus_tag=LVR01_02170;product=type I restriction-modification system subunit M;protein_id=MCE2618108.1;transl_table=11 JAJSBG010000004.1 Genbank gene 18761 19927 . - . ID=gene-LVR01_02175;Name=LVR01_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02175 JAJSBG010000004.1 Protein Homology CDS 18761 19927 . - 0 ID=cds-MCE2618109.1;Parent=gene-LVR01_02175;Dbxref=NCBI_GP:MCE2618109.1;Name=MCE2618109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903581.1;locus_tag=LVR01_02175;product=carbamoyl phosphate synthase large subunit;protein_id=MCE2618109.1;transl_table=11 JAJSBG010000004.1 Genbank gene 19940 20680 . - . ID=gene-LVR01_02180;Name=LVR01_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02180 JAJSBG010000004.1 Protein Homology CDS 19940 20680 . - 0 ID=cds-MCE2618110.1;Parent=gene-LVR01_02180;Dbxref=NCBI_GP:MCE2618110.1;Name=MCE2618110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546809.1;locus_tag=LVR01_02180;product=esterase family protein;protein_id=MCE2618110.1;transl_table=11 JAJSBG010000004.1 Genbank gene 20701 21525 . - . ID=gene-LVR01_02185;Name=LVR01_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02185 JAJSBG010000004.1 Protein Homology CDS 20701 21525 . - 0 ID=cds-MCE2618111.1;Parent=gene-LVR01_02185;Dbxref=NCBI_GP:MCE2618111.1;Name=MCE2618111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076725.1;locus_tag=LVR01_02185;product=alpha/beta hydrolase;protein_id=MCE2618111.1;transl_table=11 JAJSBG010000004.1 Genbank gene 21662 22876 . - . ID=gene-LVR01_02190;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LVR01_02190 JAJSBG010000004.1 Protein Homology CDS 21662 22876 . - 0 ID=cds-MCE2618112.1;Parent=gene-LVR01_02190;Dbxref=NCBI_GP:MCE2618112.1;Name=MCE2618112.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200101.1;locus_tag=LVR01_02190;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=MCE2618112.1;transl_table=11 JAJSBG010000004.1 Genbank gene 22885 24027 . - . ID=gene-LVR01_02195;Name=LVR01_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02195 JAJSBG010000004.1 Protein Homology CDS 22885 24027 . - 0 ID=cds-MCE2618113.1;Parent=gene-LVR01_02195;Dbxref=NCBI_GP:MCE2618113.1;Name=MCE2618113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638948.1;locus_tag=LVR01_02195;product=cysteine desulfurase;protein_id=MCE2618113.1;transl_table=11 JAJSBG010000004.1 Genbank gene 24167 24592 . + . ID=gene-LVR01_02200;Name=LVR01_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02200 JAJSBG010000004.1 Protein Homology CDS 24167 24592 . + 0 ID=cds-MCE2618114.1;Parent=gene-LVR01_02200;Dbxref=NCBI_GP:MCE2618114.1;Name=MCE2618114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073932.1;locus_tag=LVR01_02200;product=hypothetical protein;protein_id=MCE2618114.1;transl_table=11 JAJSBG010000004.1 Genbank gene 24789 27014 . - . ID=gene-LVR01_02205;Name=LVR01_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02205 JAJSBG010000004.1 Protein Homology CDS 24789 27014 . - 0 ID=cds-MCE2618115.1;Parent=gene-LVR01_02205;Dbxref=NCBI_GP:MCE2618115.1;Name=MCE2618115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908822.1;locus_tag=LVR01_02205;product=DNA translocase FtsK;protein_id=MCE2618115.1;transl_table=11 JAJSBG010000004.1 Genbank gene 27181 29133 . - . ID=gene-LVR01_02210;Name=LVR01_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02210 JAJSBG010000004.1 Protein Homology CDS 27181 29133 . - 0 ID=cds-MCE2618116.1;Parent=gene-LVR01_02210;Dbxref=NCBI_GP:MCE2618116.1;Name=MCE2618116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701424.1;locus_tag=LVR01_02210;product=fructose-specific PTS transporter subunit EIIC;protein_id=MCE2618116.1;transl_table=11 JAJSBG010000004.1 Genbank gene 29130 30041 . - . ID=gene-LVR01_02215;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=LVR01_02215 JAJSBG010000004.1 Protein Homology CDS 29130 30041 . - 0 ID=cds-MCE2618117.1;Parent=gene-LVR01_02215;Dbxref=NCBI_GP:MCE2618117.1;Name=MCE2618117.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605104.1;locus_tag=LVR01_02215;product=1-phosphofructokinase;protein_id=MCE2618117.1;transl_table=11 JAJSBG010000004.1 Genbank gene 30038 30778 . - . ID=gene-LVR01_02220;Name=LVR01_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02220 JAJSBG010000004.1 Protein Homology CDS 30038 30778 . - 0 ID=cds-MCE2618118.1;Parent=gene-LVR01_02220;Dbxref=NCBI_GP:MCE2618118.1;Name=MCE2618118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920650.1;locus_tag=LVR01_02220;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCE2618118.1;transl_table=11 JAJSBG010000004.1 Genbank gene 30940 31027 . + . ID=gene-LVR01_02225;Name=LVR01_02225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_02225 JAJSBG010000004.1 tRNAscan-SE tRNA 30940 31027 . + . ID=rna-LVR01_02225;Parent=gene-LVR01_02225;anticodon=(pos:30974..30976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02225;product=tRNA-Ser JAJSBG010000004.1 tRNAscan-SE exon 30940 31027 . + . ID=exon-LVR01_02225-1;Parent=rna-LVR01_02225;anticodon=(pos:30974..30976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02225;product=tRNA-Ser JAJSBG010000004.1 Genbank gene 31383 31847 . + . ID=gene-LVR01_02230;Name=LVR01_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02230 JAJSBG010000004.1 Protein Homology CDS 31383 31847 . + 0 ID=cds-MCE2618119.1;Parent=gene-LVR01_02230;Dbxref=NCBI_GP:MCE2618119.1;Name=MCE2618119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049399.1;locus_tag=LVR01_02230;product=TM2 domain-containing protein;protein_id=MCE2618119.1;transl_table=11 JAJSBG010000004.1 Genbank gene 31902 32372 . + . ID=gene-LVR01_02235;Name=LVR01_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02235 JAJSBG010000004.1 Protein Homology CDS 31902 32372 . + 0 ID=cds-MCE2618120.1;Parent=gene-LVR01_02235;Dbxref=NCBI_GP:MCE2618120.1;Name=MCE2618120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661389.1;locus_tag=LVR01_02235;product=hypothetical protein;protein_id=MCE2618120.1;transl_table=11 JAJSBG010000004.1 Genbank gene 32399 33175 . + . ID=gene-LVR01_02240;Name=LVR01_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02240 JAJSBG010000004.1 Protein Homology CDS 32399 33175 . + 0 ID=cds-MCE2618121.1;Parent=gene-LVR01_02240;Dbxref=NCBI_GP:MCE2618121.1;Name=MCE2618121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994488.1;locus_tag=LVR01_02240;product=DUF1828 domain-containing protein;protein_id=MCE2618121.1;transl_table=11 JAJSBG010000004.1 Genbank gene 33423 33770 . - . ID=gene-LVR01_02245;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LVR01_02245 JAJSBG010000004.1 cmsearch tmRNA 33423 33770 . - . ID=rna-LVR01_02245;Parent=gene-LVR01_02245;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_02245;product=transfer-messenger RNA JAJSBG010000004.1 cmsearch exon 33423 33770 . - . ID=exon-LVR01_02245-1;Parent=rna-LVR01_02245;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_02245;product=transfer-messenger RNA JAJSBG010000004.1 Genbank gene 34417 35526 . - . ID=gene-LVR01_02250;Name=cozE;gbkey=Gene;gene=cozE;gene_biotype=protein_coding;locus_tag=LVR01_02250 JAJSBG010000004.1 Protein Homology CDS 34417 35526 . - 0 ID=cds-MCE2618122.1;Parent=gene-LVR01_02250;Dbxref=NCBI_GP:MCE2618122.1;Name=MCE2618122.1;gbkey=CDS;gene=cozE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489841.1;locus_tag=LVR01_02250;product=cell elongation protein CozE;protein_id=MCE2618122.1;transl_table=11 JAJSBG010000004.1 Genbank gene 35629 36870 . + . ID=gene-LVR01_02255;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=LVR01_02255 JAJSBG010000004.1 Protein Homology CDS 35629 36870 . + 0 ID=cds-MCE2618123.1;Parent=gene-LVR01_02255;Dbxref=NCBI_GP:MCE2618123.1;Name=MCE2618123.1;gbkey=CDS;gene=pbp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397185.1;locus_tag=LVR01_02255;product=D-alanyl-D-alanine carboxypeptidase PBP3;protein_id=MCE2618123.1;transl_table=11 JAJSBG010000004.1 Genbank gene 36998 38410 . - . ID=gene-LVR01_02260;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LVR01_02260 JAJSBG010000004.1 Protein Homology CDS 36998 38410 . - 0 ID=cds-MCE2618124.1;Parent=gene-LVR01_02260;Dbxref=NCBI_GP:MCE2618124.1;Name=MCE2618124.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397186.1;locus_tag=LVR01_02260;product=Fe-S cluster assembly protein SufB;protein_id=MCE2618124.1;transl_table=11 JAJSBG010000004.1 Genbank gene 38468 38908 . - . ID=gene-LVR01_02265;Name=LVR01_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02265 JAJSBG010000004.1 Protein Homology CDS 38468 38908 . - 0 ID=cds-MCE2618125.1;Parent=gene-LVR01_02265;Dbxref=NCBI_GP:MCE2618125.1;Name=MCE2618125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397187.1;locus_tag=LVR01_02265;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=MCE2618125.1;transl_table=11 JAJSBG010000004.1 Genbank gene 38895 40121 . - . ID=gene-LVR01_02270;Name=LVR01_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02270 JAJSBG010000004.1 Protein Homology CDS 38895 40121 . - 0 ID=cds-MCE2618126.1;Parent=gene-LVR01_02270;Dbxref=NCBI_GP:MCE2618126.1;Name=MCE2618126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887707.1;locus_tag=LVR01_02270;product=cysteine desulfurase;protein_id=MCE2618126.1;transl_table=11 JAJSBG010000004.1 Genbank gene 40132 41394 . - . ID=gene-LVR01_02275;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LVR01_02275 JAJSBG010000004.1 Protein Homology CDS 40132 41394 . - 0 ID=cds-MCE2618127.1;Parent=gene-LVR01_02275;Dbxref=NCBI_GP:MCE2618127.1;Name=MCE2618127.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397189.1;locus_tag=LVR01_02275;product=Fe-S cluster assembly protein SufD;protein_id=MCE2618127.1;transl_table=11 JAJSBG010000004.1 Genbank gene 41422 42192 . - . ID=gene-LVR01_02280;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LVR01_02280 JAJSBG010000004.1 Protein Homology CDS 41422 42192 . - 0 ID=cds-MCE2618128.1;Parent=gene-LVR01_02280;Dbxref=NCBI_GP:MCE2618128.1;Name=MCE2618128.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114488.1;locus_tag=LVR01_02280;product=Fe-S cluster assembly ATPase SufC;protein_id=MCE2618128.1;transl_table=11 JAJSBG010000004.1 Genbank gene 42457 42651 . - . ID=gene-LVR01_02285;Name=LVR01_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02285 JAJSBG010000004.1 Protein Homology CDS 42457 42651 . - 0 ID=cds-MCE2618129.1;Parent=gene-LVR01_02285;Dbxref=NCBI_GP:MCE2618129.1;Name=MCE2618129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041548.1;locus_tag=LVR01_02285;product=DUF3272 domain-containing protein;protein_id=MCE2618129.1;transl_table=11 JAJSBG010000004.1 Genbank gene 42679 44334 . - . ID=gene-LVR01_02290;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LVR01_02290 JAJSBG010000004.1 Protein Homology CDS 42679 44334 . - 0 ID=cds-MCE2618130.1;Parent=gene-LVR01_02290;Dbxref=NCBI_GP:MCE2618130.1;Name=MCE2618130.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283769.1;locus_tag=LVR01_02290;product=DNA polymerase III subunit gamma/tau;protein_id=MCE2618130.1;transl_table=11 JAJSBG010000004.1 Genbank gene 44334 44831 . - . ID=gene-LVR01_02295;Name=LVR01_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02295 JAJSBG010000004.1 Protein Homology CDS 44334 44831 . - 0 ID=cds-MCE2618131.1;Parent=gene-LVR01_02295;Dbxref=NCBI_GP:MCE2618131.1;Name=MCE2618131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920162.1;locus_tag=LVR01_02295;product=GAF domain-containing protein;protein_id=MCE2618131.1;transl_table=11 JAJSBG010000004.1 Genbank gene 44918 46120 . - . ID=gene-LVR01_02300;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LVR01_02300 JAJSBG010000004.1 Protein Homology CDS 44918 46120 . - 0 ID=cds-MCE2618132.1;Parent=gene-LVR01_02300;Dbxref=NCBI_GP:MCE2618132.1;Name=MCE2618132.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=LVR01_02300;product=30S ribosomal protein S1;protein_id=MCE2618132.1;transl_table=11 JAJSBG010000004.1 Genbank gene 46282 46353 . - . ID=gene-LVR01_02305;Name=LVR01_02305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_02305 JAJSBG010000004.1 tRNAscan-SE tRNA 46282 46353 . - . ID=rna-LVR01_02305;Parent=gene-LVR01_02305;anticodon=(pos:complement(46319..46321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02305;product=tRNA-Gln JAJSBG010000004.1 tRNAscan-SE exon 46282 46353 . - . ID=exon-LVR01_02305-1;Parent=rna-LVR01_02305;anticodon=(pos:complement(46319..46321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02305;product=tRNA-Gln JAJSBG010000004.1 Genbank gene 46363 46443 . - . ID=gene-LVR01_02310;Name=LVR01_02310;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_02310 JAJSBG010000004.1 tRNAscan-SE tRNA 46363 46443 . - . ID=rna-LVR01_02310;Parent=gene-LVR01_02310;anticodon=(pos:complement(46407..46409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02310;product=tRNA-Tyr JAJSBG010000004.1 tRNAscan-SE exon 46363 46443 . - . ID=exon-LVR01_02310-1;Parent=rna-LVR01_02310;anticodon=(pos:complement(46407..46409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02310;product=tRNA-Tyr JAJSBG010000004.1 Genbank gene 46493 46723 . - . ID=gene-LVR01_02315;Name=LVR01_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02315 JAJSBG010000004.1 Protein Homology CDS 46493 46723 . - 0 ID=cds-MCE2618133.1;Parent=gene-LVR01_02315;Dbxref=NCBI_GP:MCE2618133.1;Name=MCE2618133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037109.1;locus_tag=LVR01_02315;product=DUF2969 domain-containing protein;protein_id=MCE2618133.1;transl_table=11 JAJSBG010000004.1 Genbank gene 46891 47535 . - . ID=gene-LVR01_02320;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=LVR01_02320 JAJSBG010000004.1 Protein Homology CDS 46891 47535 . - 0 ID=cds-MCE2618134.1;Parent=gene-LVR01_02320;Dbxref=NCBI_GP:MCE2618134.1;Name=MCE2618134.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398107.1;locus_tag=LVR01_02320;product=pyroglutamyl-peptidase I;protein_id=MCE2618134.1;transl_table=11 JAJSBG010000004.1 Genbank gene 47550 48473 . - . ID=gene-LVR01_02325;Name=LVR01_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02325 JAJSBG010000004.1 Protein Homology CDS 47550 48473 . - 0 ID=cds-MCE2618135.1;Parent=gene-LVR01_02325;Dbxref=NCBI_GP:MCE2618135.1;Name=MCE2618135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137271.1;locus_tag=LVR01_02325;product=DUF979 domain-containing protein;protein_id=MCE2618135.1;transl_table=11 JAJSBG010000004.1 Genbank gene 48470 49159 . - . ID=gene-LVR01_02330;Name=LVR01_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02330 JAJSBG010000004.1 Protein Homology CDS 48470 49159 . - 0 ID=cds-MCE2618136.1;Parent=gene-LVR01_02330;Dbxref=NCBI_GP:MCE2618136.1;Name=MCE2618136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000454813.1;locus_tag=LVR01_02330;product=DUF969 domain-containing protein;protein_id=MCE2618136.1;transl_table=11 JAJSBG010000004.1 Genbank gene 49224 51191 . - . ID=gene-LVR01_02335;Name=LVR01_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02335 JAJSBG010000004.1 Protein Homology CDS 49224 51191 . - 0 ID=cds-MCE2618137.1;Parent=gene-LVR01_02335;Dbxref=NCBI_GP:MCE2618137.1;Name=MCE2618137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837407.1;locus_tag=LVR01_02335;product=peptide ABC transporter substrate-binding protein;protein_id=MCE2618137.1;transl_table=11 JAJSBG010000004.1 Genbank gene 51214 52236 . - . ID=gene-LVR01_02340;Name=LVR01_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02340 JAJSBG010000004.1 Protein Homology CDS 51214 52236 . - 0 ID=cds-MCE2618138.1;Parent=gene-LVR01_02340;Dbxref=NCBI_GP:MCE2618138.1;Name=MCE2618138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730267.1;locus_tag=LVR01_02340;product=branched-chain amino acid aminotransferase;protein_id=MCE2618138.1;transl_table=11 JAJSBG010000004.1 Genbank gene 52371 54842 . - . ID=gene-LVR01_02345;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LVR01_02345 JAJSBG010000004.1 Protein Homology CDS 52371 54842 . - 0 ID=cds-MCE2618139.1;Parent=gene-LVR01_02345;Dbxref=NCBI_GP:MCE2618139.1;Name=MCE2618139.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512618.1;locus_tag=LVR01_02345;product=DNA topoisomerase IV subunit A;protein_id=MCE2618139.1;transl_table=11 JAJSBG010000004.1 Genbank gene 55100 56269 . - . ID=gene-LVR01_02350;Name=LVR01_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02350 JAJSBG010000004.1 Protein Homology CDS 55100 56269 . - 0 ID=cds-MCE2618140.1;Parent=gene-LVR01_02350;Dbxref=NCBI_GP:MCE2618140.1;Name=MCE2618140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148697.1;locus_tag=LVR01_02350;product=hypothetical protein;protein_id=MCE2618140.1;transl_table=11 JAJSBG010000004.1 Genbank gene 56320 57147 . - . ID=gene-LVR01_02355;Name=LVR01_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02355 JAJSBG010000004.1 Protein Homology CDS 56320 57147 . - 0 ID=cds-MCE2618141.1;Parent=gene-LVR01_02355;Dbxref=NCBI_GP:MCE2618141.1;Name=MCE2618141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148702.1;locus_tag=LVR01_02355;product=aminoglycoside 6-adenylyltransferase;protein_id=MCE2618141.1;transl_table=11 JAJSBG010000004.1 Genbank gene 57212 57814 . - . ID=gene-LVR01_02360;Name=LVR01_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02360 JAJSBG010000004.1 Protein Homology CDS 57212 57814 . - 0 ID=cds-MCE2618142.1;Parent=gene-LVR01_02360;Dbxref=NCBI_GP:MCE2618142.1;Name=MCE2618142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176895.1;locus_tag=LVR01_02360;product=Fic family protein;protein_id=MCE2618142.1;transl_table=11 JAJSBG010000004.1 Genbank gene 57827 58168 . - . ID=gene-LVR01_02365;Name=LVR01_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02365 JAJSBG010000004.1 Protein Homology CDS 57827 58168 . - 0 ID=cds-MCE2618143.1;Parent=gene-LVR01_02365;Dbxref=NCBI_GP:MCE2618143.1;Name=MCE2618143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247490.1;locus_tag=LVR01_02365;product=hypothetical protein;protein_id=MCE2618143.1;transl_table=11 JAJSBG010000004.1 Genbank gene 58318 59439 . - . ID=gene-LVR01_02370;Name=LVR01_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02370 JAJSBG010000004.1 Protein Homology CDS 58318 59439 . - 0 ID=cds-MCE2618144.1;Parent=gene-LVR01_02370;Dbxref=NCBI_GP:MCE2618144.1;Name=MCE2618144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LVR01_02370;product=restriction endonuclease subunit S;protein_id=MCE2618144.1;transl_table=11 JAJSBG010000004.1 Genbank gene 59457 61484 . - . ID=gene-LVR01_02375;Name=LVR01_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02375 JAJSBG010000004.1 Protein Homology CDS 59457 61484 . - 0 ID=cds-MCE2618145.1;Parent=gene-LVR01_02375;Dbxref=NCBI_GP:MCE2618145.1;Name=MCE2618145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014166.1;locus_tag=LVR01_02375;product=SAM-dependent methyltransferase;protein_id=MCE2618145.1;transl_table=11 JAJSBG010000004.1 Genbank gene 61499 63442 . - . ID=gene-LVR01_02380;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LVR01_02380 JAJSBG010000004.1 Protein Homology CDS 61499 63442 . - 0 ID=cds-MCE2618146.1;Parent=gene-LVR01_02380;Dbxref=NCBI_GP:MCE2618146.1;Name=MCE2618146.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522163.1;locus_tag=LVR01_02380;product=DNA topoisomerase IV subunit B;protein_id=MCE2618146.1;transl_table=11 JAJSBG010000004.1 Genbank gene 63578 64219 . + . ID=gene-LVR01_02385;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LVR01_02385 JAJSBG010000004.1 Protein Homology CDS 63578 64219 . + 0 ID=cds-MCE2618147.1;Parent=gene-LVR01_02385;Dbxref=NCBI_GP:MCE2618147.1;Name=MCE2618147.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628793.1;locus_tag=LVR01_02385;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=MCE2618147.1;transl_table=11 JAJSBG010000004.1 Genbank gene 64257 65213 . - . ID=gene-LVR01_02390;Name=LVR01_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02390 JAJSBG010000004.1 Protein Homology CDS 64257 65213 . - 0 ID=cds-MCE2618148.1;Parent=gene-LVR01_02390;Dbxref=NCBI_GP:MCE2618148.1;Name=MCE2618148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060306.1;locus_tag=LVR01_02390;product=ABC transporter permease;protein_id=MCE2618148.1;transl_table=11 JAJSBG010000004.1 Genbank gene 65216 66274 . - . ID=gene-LVR01_02395;Name=LVR01_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02395 JAJSBG010000004.1 Protein Homology CDS 65216 66274 . - 0 ID=cds-MCE2618149.1;Parent=gene-LVR01_02395;Dbxref=NCBI_GP:MCE2618149.1;Name=MCE2618149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038644.1;locus_tag=LVR01_02395;product=ABC transporter permease;protein_id=MCE2618149.1;transl_table=11 JAJSBG010000004.1 Genbank gene 66267 67802 . - . ID=gene-LVR01_02400;Name=LVR01_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02400 JAJSBG010000004.1 Protein Homology CDS 66267 67802 . - 0 ID=cds-MCE2618150.1;Parent=gene-LVR01_02400;Dbxref=NCBI_GP:MCE2618150.1;Name=MCE2618150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000929819.1;locus_tag=LVR01_02400;product=ABC transporter ATP-binding protein;protein_id=MCE2618150.1;transl_table=11 JAJSBG010000004.1 Genbank gene 67946 69001 . - . ID=gene-LVR01_02405;Name=LVR01_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02405 JAJSBG010000004.1 Protein Homology CDS 67946 69001 . - 0 ID=cds-MCE2618151.1;Parent=gene-LVR01_02405;Dbxref=NCBI_GP:MCE2618151.1;Name=MCE2618151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036143.1;locus_tag=LVR01_02405;product=BMP family protein;protein_id=MCE2618151.1;transl_table=11 JAJSBG010000004.1 Genbank gene 69091 69480 . - . ID=gene-LVR01_02410;Name=LVR01_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02410 JAJSBG010000004.1 Protein Homology CDS 69091 69480 . - 0 ID=cds-MCE2618152.1;Parent=gene-LVR01_02410;Dbxref=NCBI_GP:MCE2618152.1;Name=MCE2618152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730277.1;locus_tag=LVR01_02410;product=cytidine deaminase;protein_id=MCE2618152.1;transl_table=11 JAJSBG010000004.1 Genbank gene 69467 70129 . - . ID=gene-LVR01_02415;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LVR01_02415 JAJSBG010000004.1 Protein Homology CDS 69467 70129 . - 0 ID=cds-MCE2618153.1;Parent=gene-LVR01_02415;Dbxref=NCBI_GP:MCE2618153.1;Name=MCE2618153.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773666.1;locus_tag=LVR01_02415;product=deoxyribose-phosphate aldolase;protein_id=MCE2618153.1;transl_table=11 JAJSBG010000004.1 Genbank gene 70149 71426 . - . ID=gene-LVR01_02420;Name=LVR01_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02420 JAJSBG010000004.1 Protein Homology CDS 70149 71426 . - 0 ID=cds-MCE2618154.1;Parent=gene-LVR01_02420;Dbxref=NCBI_GP:MCE2618154.1;Name=MCE2618154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001202959.1;locus_tag=LVR01_02420;product=pyrimidine-nucleoside phosphorylase;protein_id=MCE2618154.1;transl_table=11 JAJSBG010000004.1 Genbank gene 71423 72004 . - . ID=gene-LVR01_02425;Name=LVR01_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02425 JAJSBG010000004.1 Protein Homology CDS 71423 72004 . - 0 ID=cds-MCE2618155.1;Parent=gene-LVR01_02425;Dbxref=NCBI_GP:MCE2618155.1;Name=MCE2618155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289981.1;locus_tag=LVR01_02425;product=class I SAM-dependent methyltransferase;protein_id=MCE2618155.1;transl_table=11 JAJSBG010000004.1 Genbank gene 72222 72626 . - . ID=gene-LVR01_02430;Name=LVR01_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02430 JAJSBG010000004.1 Protein Homology CDS 72222 72626 . - 0 ID=cds-MCE2618156.1;Parent=gene-LVR01_02430;Dbxref=NCBI_GP:MCE2618156.1;Name=MCE2618156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698118.1;locus_tag=LVR01_02430;product=hypothetical protein;protein_id=MCE2618156.1;transl_table=11 JAJSBG010000004.1 Genbank gene 72826 73746 . + . ID=gene-LVR01_02435;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LVR01_02435 JAJSBG010000004.1 Protein Homology CDS 72826 73746 . + 0 ID=cds-MCE2618157.1;Parent=gene-LVR01_02435;Dbxref=NCBI_GP:MCE2618157.1;Name=MCE2618157.1;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261526.1;locus_tag=LVR01_02435;product=type I pantothenate kinase;protein_id=MCE2618157.1;transl_table=11 JAJSBG010000004.1 Genbank gene 73814 74050 . + . ID=gene-LVR01_02440;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LVR01_02440 JAJSBG010000004.1 Protein Homology CDS 73814 74050 . + 0 ID=cds-MCE2618158.1;Parent=gene-LVR01_02440;Dbxref=NCBI_GP:MCE2618158.1;Name=MCE2618158.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274003.1;locus_tag=LVR01_02440;product=30S ribosomal protein S20;protein_id=MCE2618158.1;transl_table=11 JAJSBG010000004.1 Genbank pseudogene 74103 74614 . + . ID=gene-LVR01_02445;Name=LVR01_02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02445;pseudo=true JAJSBG010000004.1 Protein Homology CDS 74103 74614 . + 0 ID=cds-LVR01_02445;Parent=gene-LVR01_02445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684224.1;locus_tag=LVR01_02445;product=DNA topology modulation protein;pseudo=true;transl_table=11 JAJSBG010000004.1 Genbank gene 74709 75419 . - . ID=gene-LVR01_02450;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=LVR01_02450 JAJSBG010000004.1 Protein Homology CDS 74709 75419 . - 0 ID=cds-MCE2618159.1;Parent=gene-LVR01_02450;Dbxref=NCBI_GP:MCE2618159.1;Name=MCE2618159.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519526.1;locus_tag=LVR01_02450;product=purine-nucleoside phosphorylase;protein_id=MCE2618159.1;transl_table=11 JAJSBG010000004.1 Genbank gene 75884 76105 . - . ID=gene-LVR01_02455;Name=LVR01_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02455 JAJSBG010000004.1 GeneMarkS-2+ CDS 75884 76105 . - 0 ID=cds-MCE2618160.1;Parent=gene-LVR01_02455;Dbxref=NCBI_GP:MCE2618160.1;Name=MCE2618160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_02455;product=hypothetical protein;protein_id=MCE2618160.1;transl_table=11 JAJSBG010000004.1 Genbank gene 76209 76955 . - . ID=gene-LVR01_02460;Name=LVR01_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02460 JAJSBG010000004.1 Protein Homology CDS 76209 76955 . - 0 ID=cds-MCE2618161.1;Parent=gene-LVR01_02460;Dbxref=NCBI_GP:MCE2618161.1;Name=MCE2618161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275913.1;locus_tag=LVR01_02460;product=discoidin domain-containing protein;protein_id=MCE2618161.1;transl_table=11 JAJSBG010000004.1 Genbank pseudogene 77028 77429 . - . ID=gene-LVR01_02465;Name=LVR01_02465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02465;pseudo=true JAJSBG010000004.1 Protein Homology CDS 77028 77429 . - 0 ID=cds-LVR01_02465;Parent=gene-LVR01_02465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012956.2;locus_tag=LVR01_02465;product=discoidin domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000004.1 Genbank pseudogene 77829 78935 . - . ID=gene-LVR01_02470;Name=LVR01_02470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02470;pseudo=true JAJSBG010000004.1 Protein Homology CDS 77829 78935 . - 0 ID=cds-LVR01_02470;Parent=gene-LVR01_02470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013890.2;locus_tag=LVR01_02470;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 JAJSBG010000004.1 Genbank gene 78963 79208 . - . ID=gene-LVR01_02475;Name=LVR01_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02475 JAJSBG010000004.1 Protein Homology CDS 78963 79208 . - 0 ID=cds-MCE2618162.1;Parent=gene-LVR01_02475;Dbxref=NCBI_GP:MCE2618162.1;Name=MCE2618162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=LVR01_02475;product=hypothetical protein;protein_id=MCE2618162.1;transl_table=11 JAJSBG010000004.1 Genbank gene 79294 79593 . - . ID=gene-LVR01_02480;Name=LVR01_02480;end_range=79593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02480;partial=true JAJSBG010000004.1 Protein Homology CDS 79294 79593 . - 0 ID=cds-MCE2618163.1;Parent=gene-LVR01_02480;Dbxref=NCBI_GP:MCE2618163.1;Name=MCE2618163.1;end_range=79593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_02480;partial=true;product=transposase;protein_id=MCE2618163.1;transl_table=11 ##sequence-region JAJSBG010000050.1 1 12184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000050.1 Genbank region 1 12184 . + . ID=JAJSBG010000050.1:1..12184;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000050.1 Genbank gene 35 295 . - . ID=gene-LVR01_09860;Name=LVR01_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09860 JAJSBG010000050.1 Protein Homology CDS 35 295 . - 0 ID=cds-MCE2619501.1;Parent=gene-LVR01_09860;Dbxref=NCBI_GP:MCE2619501.1;Name=MCE2619501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819325.1;locus_tag=LVR01_09860;product=DUF1372 family protein;protein_id=MCE2619501.1;transl_table=11 JAJSBG010000050.1 Genbank gene 292 453 . - . ID=gene-LVR01_09865;Name=LVR01_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09865 JAJSBG010000050.1 Protein Homology CDS 292 453 . - 0 ID=cds-MCE2619502.1;Parent=gene-LVR01_09865;Dbxref=NCBI_GP:MCE2619502.1;Name=MCE2619502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059889.1;locus_tag=LVR01_09865;product=hypothetical protein;protein_id=MCE2619502.1;transl_table=11 JAJSBG010000050.1 Genbank gene 453 956 . - . ID=gene-LVR01_09870;Name=LVR01_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09870 JAJSBG010000050.1 Protein Homology CDS 453 956 . - 0 ID=cds-MCE2619503.1;Parent=gene-LVR01_09870;Dbxref=NCBI_GP:MCE2619503.1;Name=MCE2619503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772904.1;locus_tag=LVR01_09870;product=DUF1642 domain-containing protein;protein_id=MCE2619503.1;transl_table=11 JAJSBG010000050.1 Genbank gene 934 1137 . - . ID=gene-LVR01_09875;Name=LVR01_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09875 JAJSBG010000050.1 GeneMarkS-2+ CDS 934 1137 . - 0 ID=cds-MCE2619504.1;Parent=gene-LVR01_09875;Dbxref=NCBI_GP:MCE2619504.1;Name=MCE2619504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_09875;product=hypothetical protein;protein_id=MCE2619504.1;transl_table=11 JAJSBG010000050.1 Genbank gene 1124 1291 . - . ID=gene-LVR01_09880;Name=LVR01_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09880 JAJSBG010000050.1 Protein Homology CDS 1124 1291 . - 0 ID=cds-MCE2619505.1;Parent=gene-LVR01_09880;Dbxref=NCBI_GP:MCE2619505.1;Name=MCE2619505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=LVR01_09880;product=hypothetical protein;protein_id=MCE2619505.1;transl_table=11 JAJSBG010000050.1 Genbank gene 1307 1732 . - . ID=gene-LVR01_09885;Name=LVR01_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09885 JAJSBG010000050.1 Protein Homology CDS 1307 1732 . - 0 ID=cds-MCE2619506.1;Parent=gene-LVR01_09885;Dbxref=NCBI_GP:MCE2619506.1;Name=MCE2619506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158043.1;locus_tag=LVR01_09885;product=hypothetical protein;protein_id=MCE2619506.1;transl_table=11 JAJSBG010000050.1 Genbank gene 1990 2493 . - . ID=gene-LVR01_09890;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LVR01_09890 JAJSBG010000050.1 Protein Homology CDS 1990 2493 . - 0 ID=cds-MCE2619507.1;Parent=gene-LVR01_09890;Dbxref=NCBI_GP:MCE2619507.1;Name=MCE2619507.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609607.1;locus_tag=LVR01_09890;product=single-stranded DNA-binding protein;protein_id=MCE2619507.1;transl_table=11 JAJSBG010000050.1 Genbank gene 2483 2659 . - . ID=gene-LVR01_09895;Name=LVR01_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09895 JAJSBG010000050.1 Protein Homology CDS 2483 2659 . - 0 ID=cds-MCE2619508.1;Parent=gene-LVR01_09895;Dbxref=NCBI_GP:MCE2619508.1;Name=MCE2619508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203349.1;locus_tag=LVR01_09895;product=hypothetical protein;protein_id=MCE2619508.1;transl_table=11 JAJSBG010000050.1 Genbank gene 2681 3670 . - . ID=gene-LVR01_09900;Name=LVR01_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09900 JAJSBG010000050.1 Protein Homology CDS 2681 3670 . - 0 ID=cds-MCE2619509.1;Parent=gene-LVR01_09900;Dbxref=NCBI_GP:MCE2619509.1;Name=MCE2619509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237813.1;locus_tag=LVR01_09900;product=DUF1351 domain-containing protein;protein_id=MCE2619509.1;transl_table=11 JAJSBG010000050.1 Genbank gene 3674 4366 . - . ID=gene-LVR01_09905;Name=LVR01_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09905 JAJSBG010000050.1 Protein Homology CDS 3674 4366 . - 0 ID=cds-MCE2619510.1;Parent=gene-LVR01_09905;Dbxref=NCBI_GP:MCE2619510.1;Name=MCE2619510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157762.1;locus_tag=LVR01_09905;product=ERF family protein;protein_id=MCE2619510.1;transl_table=11 JAJSBG010000050.1 Genbank gene 4354 4542 . - . ID=gene-LVR01_09910;Name=LVR01_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09910 JAJSBG010000050.1 Protein Homology CDS 4354 4542 . - 0 ID=cds-MCE2619511.1;Parent=gene-LVR01_09910;Dbxref=NCBI_GP:MCE2619511.1;Name=MCE2619511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613911.1;locus_tag=LVR01_09910;product=hypothetical protein;protein_id=MCE2619511.1;transl_table=11 JAJSBG010000050.1 Genbank gene 4648 4791 . - . ID=gene-LVR01_09915;Name=LVR01_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09915 JAJSBG010000050.1 Protein Homology CDS 4648 4791 . - 0 ID=cds-MCE2619512.1;Parent=gene-LVR01_09915;Dbxref=NCBI_GP:MCE2619512.1;Name=MCE2619512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196748.1;locus_tag=LVR01_09915;product=hypothetical protein;protein_id=MCE2619512.1;transl_table=11 JAJSBG010000050.1 Genbank gene 4808 5155 . - . ID=gene-LVR01_09920;Name=LVR01_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09920 JAJSBG010000050.1 Protein Homology CDS 4808 5155 . - 0 ID=cds-MCE2619513.1;Parent=gene-LVR01_09920;Dbxref=NCBI_GP:MCE2619513.1;Name=MCE2619513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973630.1;locus_tag=LVR01_09920;product=hypothetical protein;protein_id=MCE2619513.1;transl_table=11 JAJSBG010000050.1 Genbank gene 5155 5412 . - . ID=gene-LVR01_09925;Name=LVR01_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09925 JAJSBG010000050.1 Protein Homology CDS 5155 5412 . - 0 ID=cds-MCE2619514.1;Parent=gene-LVR01_09925;Dbxref=NCBI_GP:MCE2619514.1;Name=MCE2619514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608473.1;locus_tag=LVR01_09925;product=hypothetical protein;protein_id=MCE2619514.1;transl_table=11 JAJSBG010000050.1 Genbank gene 5500 5766 . - . ID=gene-LVR01_09930;Name=LVR01_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09930 JAJSBG010000050.1 Protein Homology CDS 5500 5766 . - 0 ID=cds-MCE2619515.1;Parent=gene-LVR01_09930;Dbxref=NCBI_GP:MCE2619515.1;Name=MCE2619515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450962.1;locus_tag=LVR01_09930;product=hypothetical protein;protein_id=MCE2619515.1;transl_table=11 JAJSBG010000050.1 Genbank gene 5885 6124 . + . ID=gene-LVR01_09935;Name=LVR01_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09935 JAJSBG010000050.1 Protein Homology CDS 5885 6124 . + 0 ID=cds-MCE2619516.1;Parent=gene-LVR01_09935;Dbxref=NCBI_GP:MCE2619516.1;Name=MCE2619516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134992.1;locus_tag=LVR01_09935;product=hypothetical protein;protein_id=MCE2619516.1;transl_table=11 JAJSBG010000050.1 Genbank gene 6117 6287 . - . ID=gene-LVR01_09940;Name=LVR01_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09940 JAJSBG010000050.1 Protein Homology CDS 6117 6287 . - 0 ID=cds-MCE2619517.1;Parent=gene-LVR01_09940;Dbxref=NCBI_GP:MCE2619517.1;Name=MCE2619517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660186.1;locus_tag=LVR01_09940;product=hypothetical protein;protein_id=MCE2619517.1;transl_table=11 JAJSBG010000050.1 Genbank gene 6284 6427 . - . ID=gene-LVR01_09945;Name=LVR01_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09945 JAJSBG010000050.1 Protein Homology CDS 6284 6427 . - 0 ID=cds-MCE2619518.1;Parent=gene-LVR01_09945;Dbxref=NCBI_GP:MCE2619518.1;Name=MCE2619518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389591.1;locus_tag=LVR01_09945;product=hypothetical protein;protein_id=MCE2619518.1;transl_table=11 JAJSBG010000050.1 Genbank gene 6544 6711 . + . ID=gene-LVR01_09950;Name=LVR01_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09950 JAJSBG010000050.1 Protein Homology CDS 6544 6711 . + 0 ID=cds-MCE2619519.1;Parent=gene-LVR01_09950;Dbxref=NCBI_GP:MCE2619519.1;Name=MCE2619519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397654.1;locus_tag=LVR01_09950;product=YjzC family protein;protein_id=MCE2619519.1;transl_table=11 JAJSBG010000050.1 Genbank gene 7003 7170 . - . ID=gene-LVR01_09955;Name=LVR01_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09955 JAJSBG010000050.1 Protein Homology CDS 7003 7170 . - 0 ID=cds-MCE2619520.1;Parent=gene-LVR01_09955;Dbxref=NCBI_GP:MCE2619520.1;Name=MCE2619520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152772.1;locus_tag=LVR01_09955;product=hypothetical protein;protein_id=MCE2619520.1;transl_table=11 JAJSBG010000050.1 Genbank gene 7160 8014 . - . ID=gene-LVR01_09960;Name=LVR01_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09960 JAJSBG010000050.1 Protein Homology CDS 7160 8014 . - 0 ID=cds-MCE2619521.1;Parent=gene-LVR01_09960;Dbxref=NCBI_GP:MCE2619521.1;Name=MCE2619521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203052.1;locus_tag=LVR01_09960;product=ATP-binding protein;protein_id=MCE2619521.1;transl_table=11 JAJSBG010000050.1 Genbank gene 8024 8866 . - . ID=gene-LVR01_09965;Name=LVR01_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09965 JAJSBG010000050.1 Protein Homology CDS 8024 8866 . - 0 ID=cds-MCE2619522.1;Parent=gene-LVR01_09965;Dbxref=NCBI_GP:MCE2619522.1;Name=MCE2619522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236631.1;locus_tag=LVR01_09965;product=replication initiator protein A;protein_id=MCE2619522.1;transl_table=11 JAJSBG010000050.1 Genbank gene 8906 9118 . - . ID=gene-LVR01_09970;Name=LVR01_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09970 JAJSBG010000050.1 Protein Homology CDS 8906 9118 . - 0 ID=cds-MCE2619523.1;Parent=gene-LVR01_09970;Dbxref=NCBI_GP:MCE2619523.1;Name=MCE2619523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169630.1;locus_tag=LVR01_09970;product=helix-turn-helix domain-containing protein;protein_id=MCE2619523.1;transl_table=11 JAJSBG010000050.1 Genbank gene 9131 9316 . - . ID=gene-LVR01_09975;Name=LVR01_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09975 JAJSBG010000050.1 Protein Homology CDS 9131 9316 . - 0 ID=cds-MCE2619524.1;Parent=gene-LVR01_09975;Dbxref=NCBI_GP:MCE2619524.1;Name=MCE2619524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263488.1;locus_tag=LVR01_09975;product=helix-turn-helix transcriptional regulator;protein_id=MCE2619524.1;transl_table=11 JAJSBG010000050.1 Genbank gene 9464 9682 . + . ID=gene-LVR01_09980;Name=LVR01_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09980 JAJSBG010000050.1 Protein Homology CDS 9464 9682 . + 0 ID=cds-MCE2619525.1;Parent=gene-LVR01_09980;Dbxref=NCBI_GP:MCE2619525.1;Name=MCE2619525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088838.1;locus_tag=LVR01_09980;product=hypothetical protein;protein_id=MCE2619525.1;transl_table=11 JAJSBG010000050.1 Genbank gene 9852 10562 . + . ID=gene-LVR01_09985;Name=LVR01_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09985 JAJSBG010000050.1 Protein Homology CDS 9852 10562 . + 0 ID=cds-MCE2619526.1;Parent=gene-LVR01_09985;Dbxref=NCBI_GP:MCE2619526.1;Name=MCE2619526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006951.1;locus_tag=LVR01_09985;product=DUF4145 domain-containing protein;protein_id=MCE2619526.1;transl_table=11 JAJSBG010000050.1 Genbank gene 10860 10997 . - . ID=gene-LVR01_09990;Name=LVR01_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09990 JAJSBG010000050.1 Protein Homology CDS 10860 10997 . - 0 ID=cds-MCE2619527.1;Parent=gene-LVR01_09990;Dbxref=NCBI_GP:MCE2619527.1;Name=MCE2619527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969962.1;locus_tag=LVR01_09990;product=hypothetical protein;protein_id=MCE2619527.1;transl_table=11 JAJSBG010000050.1 Genbank gene 11070 11345 . - . ID=gene-LVR01_09995;Name=LVR01_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_09995 JAJSBG010000050.1 Protein Homology CDS 11070 11345 . - 0 ID=cds-MCE2619528.1;Parent=gene-LVR01_09995;Dbxref=NCBI_GP:MCE2619528.1;Name=MCE2619528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973618.1;locus_tag=LVR01_09995;product=hypothetical protein;protein_id=MCE2619528.1;transl_table=11 JAJSBG010000050.1 Genbank gene 11515 12184 . + . ID=gene-LVR01_10000;Name=LVR01_10000;end_range=12184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10000;partial=true JAJSBG010000050.1 Protein Homology CDS 11515 12184 . + 0 ID=cds-MCE2619529.1;Parent=gene-LVR01_10000;Dbxref=NCBI_GP:MCE2619529.1;Name=MCE2619529.1;end_range=12184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377627.1;locus_tag=LVR01_10000;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCE2619529.1;transl_table=11 ##sequence-region JAJSBG010000051.1 1 12064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000051.1 Genbank region 1 12064 . + . ID=JAJSBG010000051.1:1..12064;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000051.1 Genbank gene 1 185 . + . ID=gene-LVR01_10005;Name=LVR01_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10005;partial=true;start_range=.,1 JAJSBG010000051.1 GeneMarkS-2+ CDS 1 185 . + 2 ID=cds-MCE2619530.1;Parent=gene-LVR01_10005;Dbxref=NCBI_GP:MCE2619530.1;Name=MCE2619530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10005;partial=true;product=hypothetical protein;protein_id=MCE2619530.1;start_range=.,1;transl_table=11 JAJSBG010000051.1 Genbank gene 173 1255 . - . ID=gene-LVR01_10010;Name=LVR01_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10010 JAJSBG010000051.1 Protein Homology CDS 173 1255 . - 0 ID=cds-MCE2619531.1;Parent=gene-LVR01_10010;Dbxref=NCBI_GP:MCE2619531.1;Name=MCE2619531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521532.1;locus_tag=LVR01_10010;product=DEAD/DEAH box helicase;protein_id=MCE2619531.1;transl_table=11 JAJSBG010000051.1 Genbank gene 1252 2229 . - . ID=gene-LVR01_10015;Name=LVR01_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10015 JAJSBG010000051.1 Protein Homology CDS 1252 2229 . - 0 ID=cds-MCE2619532.1;Parent=gene-LVR01_10015;Dbxref=NCBI_GP:MCE2619532.1;Name=MCE2619532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002206301.1;locus_tag=LVR01_10015;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCE2619532.1;transl_table=11 JAJSBG010000051.1 Genbank gene 2426 3364 . + . ID=gene-LVR01_10020;Name=LVR01_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10020 JAJSBG010000051.1 Protein Homology CDS 2426 3364 . + 0 ID=cds-MCE2619533.1;Parent=gene-LVR01_10020;Dbxref=NCBI_GP:MCE2619533.1;Name=MCE2619533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603336.1;locus_tag=LVR01_10020;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCE2619533.1;transl_table=11 JAJSBG010000051.1 Genbank pseudogene 3370 3480 . + . ID=gene-LVR01_10025;Name=LVR01_10025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10025;pseudo=true JAJSBG010000051.1 Protein Homology CDS 3370 3480 . + 0 ID=cds-LVR01_10025;Parent=gene-LVR01_10025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=LVR01_10025;product=flagellar assembly protein H domain protein;pseudo=true;transl_table=11 JAJSBG010000051.1 Genbank gene 3968 4567 . + . ID=gene-LVR01_10030;Name=LVR01_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10030 JAJSBG010000051.1 Protein Homology CDS 3968 4567 . + 0 ID=cds-MCE2619534.1;Parent=gene-LVR01_10030;Dbxref=NCBI_GP:MCE2619534.1;Name=MCE2619534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998388.1;locus_tag=LVR01_10030;product=DUF6088 family protein;protein_id=MCE2619534.1;transl_table=11 JAJSBG010000051.1 Genbank gene 4802 6193 . + . ID=gene-LVR01_10035;Name=LVR01_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10035 JAJSBG010000051.1 Protein Homology CDS 4802 6193 . + 0 ID=cds-MCE2619535.1;Parent=gene-LVR01_10035;Dbxref=NCBI_GP:MCE2619535.1;Name=MCE2619535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013193417.1;locus_tag=LVR01_10035;product=polysaccharide deacetylase family protein;protein_id=MCE2619535.1;transl_table=11 JAJSBG010000051.1 Genbank gene 6308 7150 . + . ID=gene-LVR01_10040;Name=LVR01_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10040 JAJSBG010000051.1 Protein Homology CDS 6308 7150 . + 0 ID=cds-MCE2619536.1;Parent=gene-LVR01_10040;Dbxref=NCBI_GP:MCE2619536.1;Name=MCE2619536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397460.1;locus_tag=LVR01_10040;product=aldo/keto reductase;protein_id=MCE2619536.1;transl_table=11 JAJSBG010000051.1 Genbank gene 7423 8184 . + . ID=gene-LVR01_10045;Name=LVR01_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10045 JAJSBG010000051.1 Protein Homology CDS 7423 8184 . + 0 ID=cds-MCE2619537.1;Parent=gene-LVR01_10045;Dbxref=NCBI_GP:MCE2619537.1;Name=MCE2619537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397459.1;locus_tag=LVR01_10045;product=elongation factor Tu;protein_id=MCE2619537.1;transl_table=11 JAJSBG010000051.1 Genbank gene 8203 9120 . + . ID=gene-LVR01_10050;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LVR01_10050 JAJSBG010000051.1 Protein Homology CDS 8203 9120 . + 0 ID=cds-MCE2619538.1;Parent=gene-LVR01_10050;Dbxref=NCBI_GP:MCE2619538.1;Name=MCE2619538.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018163989.1;locus_tag=LVR01_10050;product=glycine--tRNA ligase subunit alpha;protein_id=MCE2619538.1;transl_table=11 JAJSBG010000051.1 Genbank gene 9332 11368 . + . ID=gene-LVR01_10055;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LVR01_10055 JAJSBG010000051.1 Protein Homology CDS 9332 11368 . + 0 ID=cds-MCE2619539.1;Parent=gene-LVR01_10055;Dbxref=NCBI_GP:MCE2619539.1;Name=MCE2619539.1;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000066.1;locus_tag=LVR01_10055;product=glycine--tRNA ligase subunit beta;protein_id=MCE2619539.1;transl_table=11 JAJSBG010000051.1 Genbank gene 11411 11668 . + . ID=gene-LVR01_10060;Name=LVR01_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10060 JAJSBG010000051.1 Protein Homology CDS 11411 11668 . + 0 ID=cds-MCE2619540.1;Parent=gene-LVR01_10060;Dbxref=NCBI_GP:MCE2619540.1;Name=MCE2619540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901318.1;locus_tag=LVR01_10060;product=DUF896 family protein;protein_id=MCE2619540.1;transl_table=11 JAJSBG010000051.1 Genbank pseudogene 11768 11977 . - . ID=gene-LVR01_10065;Name=LVR01_10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10065;pseudo=true JAJSBG010000051.1 Protein Homology CDS 11768 11977 . - 0 ID=cds-LVR01_10065;Parent=gene-LVR01_10065;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175414.1;locus_tag=LVR01_10065;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000052.1 1 11920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000052.1 Genbank region 1 11920 . + . ID=JAJSBG010000052.1:1..11920;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000052.1 Genbank pseudogene 54 314 . - . ID=gene-LVR01_10070;Name=LVR01_10070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10070;pseudo=true JAJSBG010000052.1 Protein Homology CDS 54 314 . - 0 ID=cds-LVR01_10070;Parent=gene-LVR01_10070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651202.1;locus_tag=LVR01_10070;product=PaaI family thioesterase;pseudo=true;transl_table=11 JAJSBG010000052.1 Genbank pseudogene 384 1867 . - . ID=gene-LVR01_10075;Name=LVR01_10075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10075;pseudo=true JAJSBG010000052.1 Protein Homology CDS 384 1867 . - 0 ID=cds-LVR01_10075;Parent=gene-LVR01_10075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861845.1;locus_tag=LVR01_10075;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 JAJSBG010000052.1 Genbank pseudogene 1886 2962 . - . ID=gene-LVR01_10080;Name=LVR01_10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10080;pseudo=true JAJSBG010000052.1 Protein Homology CDS 1886 2962 . - 0 ID=cds-LVR01_10080;Parent=gene-LVR01_10080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189889.1;locus_tag=LVR01_10080;product=galactokinase;pseudo=true;transl_table=11 JAJSBG010000052.1 Genbank pseudogene 3067 4073 . + . ID=gene-LVR01_10085;Name=galR;gbkey=Gene;gene=galR;gene_biotype=pseudogene;locus_tag=LVR01_10085;pseudo=true JAJSBG010000052.1 Protein Homology CDS 3067 4073 . + 0 ID=cds-LVR01_10085;Parent=gene-LVR01_10085;Note=frameshifted;gbkey=CDS;gene=galR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212522.1;locus_tag=LVR01_10085;product=DNA-binding transcriptional regulator GalR;pseudo=true;transl_table=11 JAJSBG010000052.1 Genbank gene 4119 5156 . - . ID=gene-LVR01_10090;Name=LVR01_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10090 JAJSBG010000052.1 Protein Homology CDS 4119 5156 . - 0 ID=cds-MCE2619541.1;Parent=gene-LVR01_10090;Dbxref=NCBI_GP:MCE2619541.1;Name=MCE2619541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833740.1;locus_tag=LVR01_10090;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=MCE2619541.1;transl_table=11 JAJSBG010000052.1 Genbank gene 5157 5510 . - . ID=gene-LVR01_10095;Name=LVR01_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10095 JAJSBG010000052.1 Protein Homology CDS 5157 5510 . - 0 ID=cds-MCE2619542.1;Parent=gene-LVR01_10095;Dbxref=NCBI_GP:MCE2619542.1;Name=MCE2619542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864867.1;locus_tag=LVR01_10095;product=MerR family transcriptional regulator;protein_id=MCE2619542.1;transl_table=11 JAJSBG010000052.1 Genbank gene 5754 6644 . - . ID=gene-LVR01_10100;Name=czcD;gbkey=Gene;gene=czcD;gene_biotype=protein_coding;locus_tag=LVR01_10100 JAJSBG010000052.1 Protein Homology CDS 5754 6644 . - 0 ID=cds-MCE2619543.1;Parent=gene-LVR01_10100;Dbxref=NCBI_GP:MCE2619543.1;Name=MCE2619543.1;gbkey=CDS;gene=czcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645106.1;locus_tag=LVR01_10100;product=cation diffusion facilitator family transporter CzcD;protein_id=MCE2619543.1;transl_table=11 JAJSBG010000052.1 Genbank gene 6777 7313 . + . ID=gene-LVR01_10105;Name=LVR01_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10105 JAJSBG010000052.1 Protein Homology CDS 6777 7313 . + 0 ID=cds-MCE2619544.1;Parent=gene-LVR01_10105;Dbxref=NCBI_GP:MCE2619544.1;Name=MCE2619544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181689.1;locus_tag=LVR01_10105;product=TetR/AcrR family transcriptional regulator;protein_id=MCE2619544.1;transl_table=11 JAJSBG010000052.1 Genbank gene 7479 8285 . - . ID=gene-LVR01_10110;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LVR01_10110 JAJSBG010000052.1 Protein Homology CDS 7479 8285 . - 0 ID=cds-MCE2619545.1;Parent=gene-LVR01_10110;Dbxref=NCBI_GP:MCE2619545.1;Name=MCE2619545.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863945.1;locus_tag=LVR01_10110;product=nicotinamide riboside transporter PnuC;protein_id=MCE2619545.1;transl_table=11 JAJSBG010000052.1 Genbank gene 8630 10150 . - . ID=gene-LVR01_10115;Name=LVR01_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10115 JAJSBG010000052.1 Protein Homology CDS 8630 10150 . - 0 ID=cds-MCE2619546.1;Parent=gene-LVR01_10115;Dbxref=NCBI_GP:MCE2619546.1;Name=MCE2619546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007521043.1;locus_tag=LVR01_10115;product=ABC transporter permease/substrate-binding protein;protein_id=MCE2619546.1;transl_table=11 JAJSBG010000052.1 Genbank gene 10143 10871 . - . ID=gene-LVR01_10120;Name=LVR01_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10120 JAJSBG010000052.1 Protein Homology CDS 10143 10871 . - 0 ID=cds-MCE2619547.1;Parent=gene-LVR01_10120;Dbxref=NCBI_GP:MCE2619547.1;Name=MCE2619547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730520.1;locus_tag=LVR01_10120;product=ABC transporter ATP-binding protein;protein_id=MCE2619547.1;transl_table=11 JAJSBG010000052.1 Genbank pseudogene 10886 11074 . - . ID=gene-LVR01_10125;Name=LVR01_10125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10125;pseudo=true JAJSBG010000052.1 Protein Homology CDS 10886 11074 . - 0 ID=cds-LVR01_10125;Parent=gene-LVR01_10125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043863.1;locus_tag=LVR01_10125;product=ester cyclase;pseudo=true;transl_table=11 JAJSBG010000052.1 Genbank gene 11112 11555 . - . ID=gene-LVR01_10130;Name=LVR01_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10130 JAJSBG010000052.1 Protein Homology CDS 11112 11555 . - 0 ID=cds-MCE2619548.1;Parent=gene-LVR01_10130;Dbxref=NCBI_GP:MCE2619548.1;Name=MCE2619548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655220.1;locus_tag=LVR01_10130;product=MarR family transcriptional regulator;protein_id=MCE2619548.1;transl_table=11 ##sequence-region JAJSBG010000053.1 1 10312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000053.1 Genbank region 1 10312 . + . ID=JAJSBG010000053.1:1..10312;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000053.1 Genbank gene 1 730 . - . ID=gene-LVR01_10135;Name=LVR01_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10135;partial=true;start_range=.,1 JAJSBG010000053.1 Protein Homology CDS 1 730 . - 0 ID=cds-MCE2619549.1;Parent=gene-LVR01_10135;Dbxref=NCBI_GP:MCE2619549.1;Name=MCE2619549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356925.1;locus_tag=LVR01_10135;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCE2619549.1;start_range=.,1;transl_table=11 JAJSBG010000053.1 Genbank gene 1202 1411 . + . ID=gene-LVR01_10140;Name=LVR01_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10140 JAJSBG010000053.1 Protein Homology CDS 1202 1411 . + 0 ID=cds-MCE2619550.1;Parent=gene-LVR01_10140;Dbxref=NCBI_GP:MCE2619550.1;Name=MCE2619550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377929.1;locus_tag=LVR01_10140;product=helix-turn-helix transcriptional regulator;protein_id=MCE2619550.1;transl_table=11 JAJSBG010000053.1 Genbank gene 1528 1713 . + . ID=gene-LVR01_10145;Name=LVR01_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10145 JAJSBG010000053.1 Protein Homology CDS 1528 1713 . + 0 ID=cds-MCE2619551.1;Parent=gene-LVR01_10145;Dbxref=NCBI_GP:MCE2619551.1;Name=MCE2619551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274132.1;locus_tag=LVR01_10145;product=helix-turn-helix domain-containing protein;protein_id=MCE2619551.1;transl_table=11 JAJSBG010000053.1 Genbank gene 1725 1922 . + . ID=gene-LVR01_10150;Name=LVR01_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10150 JAJSBG010000053.1 Protein Homology CDS 1725 1922 . + 0 ID=cds-MCE2619552.1;Parent=gene-LVR01_10150;Dbxref=NCBI_GP:MCE2619552.1;Name=MCE2619552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066214.1;locus_tag=LVR01_10150;product=hypothetical protein;protein_id=MCE2619552.1;transl_table=11 JAJSBG010000053.1 Genbank gene 1933 2124 . + . ID=gene-LVR01_10155;Name=LVR01_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10155 JAJSBG010000053.1 Protein Homology CDS 1933 2124 . + 0 ID=cds-MCE2619553.1;Parent=gene-LVR01_10155;Dbxref=NCBI_GP:MCE2619553.1;Name=MCE2619553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451679.1;locus_tag=LVR01_10155;product=hypothetical protein;protein_id=MCE2619553.1;transl_table=11 JAJSBG010000053.1 Genbank gene 2157 2297 . + . ID=gene-LVR01_10160;Name=LVR01_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10160 JAJSBG010000053.1 Protein Homology CDS 2157 2297 . + 0 ID=cds-MCE2619554.1;Parent=gene-LVR01_10160;Dbxref=NCBI_GP:MCE2619554.1;Name=MCE2619554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993374.1;locus_tag=LVR01_10160;product=hypothetical protein;protein_id=MCE2619554.1;transl_table=11 JAJSBG010000053.1 Genbank gene 2323 2853 . - . ID=gene-LVR01_10165;Name=LVR01_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10165 JAJSBG010000053.1 Protein Homology CDS 2323 2853 . - 0 ID=cds-MCE2619555.1;Parent=gene-LVR01_10165;Dbxref=NCBI_GP:MCE2619555.1;Name=MCE2619555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135684.1;locus_tag=LVR01_10165;product=hypothetical protein;protein_id=MCE2619555.1;transl_table=11 JAJSBG010000053.1 Genbank gene 2919 3071 . + . ID=gene-LVR01_10170;Name=LVR01_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10170 JAJSBG010000053.1 Protein Homology CDS 2919 3071 . + 0 ID=cds-MCE2619556.1;Parent=gene-LVR01_10170;Dbxref=NCBI_GP:MCE2619556.1;Name=MCE2619556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284373.1;locus_tag=LVR01_10170;product=hypothetical protein;protein_id=MCE2619556.1;transl_table=11 JAJSBG010000053.1 Genbank gene 3072 3266 . - . ID=gene-LVR01_10175;Name=LVR01_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10175 JAJSBG010000053.1 GeneMarkS-2+ CDS 3072 3266 . - 0 ID=cds-MCE2619557.1;Parent=gene-LVR01_10175;Dbxref=NCBI_GP:MCE2619557.1;Name=MCE2619557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10175;product=hypothetical protein;protein_id=MCE2619557.1;transl_table=11 JAJSBG010000053.1 Genbank gene 3385 4098 . + . ID=gene-LVR01_10180;Name=LVR01_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10180 JAJSBG010000053.1 Protein Homology CDS 3385 4098 . + 0 ID=cds-MCE2619558.1;Parent=gene-LVR01_10180;Dbxref=NCBI_GP:MCE2619558.1;Name=MCE2619558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002355.1;locus_tag=LVR01_10180;product=ORF6C domain-containing protein;protein_id=MCE2619558.1;transl_table=11 JAJSBG010000053.1 Genbank gene 4230 4454 . - . ID=gene-LVR01_10185;Name=LVR01_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10185 JAJSBG010000053.1 Protein Homology CDS 4230 4454 . - 0 ID=cds-MCE2619559.1;Parent=gene-LVR01_10185;Dbxref=NCBI_GP:MCE2619559.1;Name=MCE2619559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040988.1;locus_tag=LVR01_10185;product=hypothetical protein;protein_id=MCE2619559.1;transl_table=11 JAJSBG010000053.1 Genbank gene 4572 4715 . + . ID=gene-LVR01_10190;Name=LVR01_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10190 JAJSBG010000053.1 Protein Homology CDS 4572 4715 . + 0 ID=cds-MCE2619560.1;Parent=gene-LVR01_10190;Dbxref=NCBI_GP:MCE2619560.1;Name=MCE2619560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389591.1;locus_tag=LVR01_10190;product=hypothetical protein;protein_id=MCE2619560.1;transl_table=11 JAJSBG010000053.1 Genbank gene 4820 5110 . + . ID=gene-LVR01_10195;Name=LVR01_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10195 JAJSBG010000053.1 Protein Homology CDS 4820 5110 . + 0 ID=cds-MCE2619561.1;Parent=gene-LVR01_10195;Dbxref=NCBI_GP:MCE2619561.1;Name=MCE2619561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398534.1;locus_tag=LVR01_10195;product=hypothetical protein;protein_id=MCE2619561.1;transl_table=11 JAJSBG010000053.1 Genbank gene 5122 5844 . + . ID=gene-LVR01_10200;Name=LVR01_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10200 JAJSBG010000053.1 Protein Homology CDS 5122 5844 . + 0 ID=cds-MCE2619562.1;Parent=gene-LVR01_10200;Dbxref=NCBI_GP:MCE2619562.1;Name=MCE2619562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060361.1;locus_tag=LVR01_10200;product=hypothetical protein;protein_id=MCE2619562.1;transl_table=11 JAJSBG010000053.1 Genbank gene 5855 6157 . + . ID=gene-LVR01_10205;Name=LVR01_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10205 JAJSBG010000053.1 Protein Homology CDS 5855 6157 . + 0 ID=cds-MCE2619563.1;Parent=gene-LVR01_10205;Dbxref=NCBI_GP:MCE2619563.1;Name=MCE2619563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462817.1;locus_tag=LVR01_10205;product=hypothetical protein;protein_id=MCE2619563.1;transl_table=11 JAJSBG010000053.1 Genbank gene 6170 6466 . + . ID=gene-LVR01_10210;Name=LVR01_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10210 JAJSBG010000053.1 Protein Homology CDS 6170 6466 . + 0 ID=cds-MCE2619564.1;Parent=gene-LVR01_10210;Dbxref=NCBI_GP:MCE2619564.1;Name=MCE2619564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865133.1;locus_tag=LVR01_10210;product=hypothetical protein;protein_id=MCE2619564.1;transl_table=11 JAJSBG010000053.1 Genbank gene 6459 7268 . + . ID=gene-LVR01_10215;Name=LVR01_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10215 JAJSBG010000053.1 Protein Homology CDS 6459 7268 . + 0 ID=cds-MCE2619565.1;Parent=gene-LVR01_10215;Dbxref=NCBI_GP:MCE2619565.1;Name=MCE2619565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289771.1;locus_tag=LVR01_10215;product=phage replisome organizer N-terminal domain-containing protein;protein_id=MCE2619565.1;transl_table=11 JAJSBG010000053.1 Genbank gene 7256 7414 . + . ID=gene-LVR01_10220;Name=LVR01_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10220 JAJSBG010000053.1 Protein Homology CDS 7256 7414 . + 0 ID=cds-MCE2619566.1;Parent=gene-LVR01_10220;Dbxref=NCBI_GP:MCE2619566.1;Name=MCE2619566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511765.1;locus_tag=LVR01_10220;product=hypothetical protein;protein_id=MCE2619566.1;transl_table=11 JAJSBG010000053.1 Genbank gene 7408 8178 . + . ID=gene-LVR01_10225;Name=LVR01_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10225 JAJSBG010000053.1 Protein Homology CDS 7408 8178 . + 0 ID=cds-MCE2619567.1;Parent=gene-LVR01_10225;Dbxref=NCBI_GP:MCE2619567.1;Name=MCE2619567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228202.1;locus_tag=LVR01_10225;product=ATP-binding protein;protein_id=MCE2619567.1;transl_table=11 JAJSBG010000053.1 Genbank gene 8193 8387 . + . ID=gene-LVR01_10230;Name=LVR01_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10230 JAJSBG010000053.1 Protein Homology CDS 8193 8387 . + 0 ID=cds-MCE2619568.1;Parent=gene-LVR01_10230;Dbxref=NCBI_GP:MCE2619568.1;Name=MCE2619568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470305.1;locus_tag=LVR01_10230;product=hypothetical protein;protein_id=MCE2619568.1;transl_table=11 JAJSBG010000053.1 Genbank gene 8487 8816 . + . ID=gene-LVR01_10235;Name=LVR01_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10235 JAJSBG010000053.1 GeneMarkS-2+ CDS 8487 8816 . + 0 ID=cds-MCE2619569.1;Parent=gene-LVR01_10235;Dbxref=NCBI_GP:MCE2619569.1;Name=MCE2619569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10235;product=hypothetical protein;protein_id=MCE2619569.1;transl_table=11 JAJSBG010000053.1 Genbank gene 8809 9204 . + . ID=gene-LVR01_10240;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LVR01_10240 JAJSBG010000053.1 Protein Homology CDS 8809 9204 . + 0 ID=cds-MCE2619570.1;Parent=gene-LVR01_10240;Dbxref=NCBI_GP:MCE2619570.1;Name=MCE2619570.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609565.1;locus_tag=LVR01_10240;product=single-stranded DNA-binding protein;protein_id=MCE2619570.1;transl_table=11 JAJSBG010000053.1 Genbank gene 9220 9387 . + . ID=gene-LVR01_10245;Name=LVR01_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10245 JAJSBG010000053.1 Protein Homology CDS 9220 9387 . + 0 ID=cds-MCE2619571.1;Parent=gene-LVR01_10245;Dbxref=NCBI_GP:MCE2619571.1;Name=MCE2619571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=LVR01_10245;product=hypothetical protein;protein_id=MCE2619571.1;transl_table=11 JAJSBG010000053.1 Genbank gene 9374 9565 . + . ID=gene-LVR01_10250;Name=LVR01_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10250 JAJSBG010000053.1 GeneMarkS-2+ CDS 9374 9565 . + 0 ID=cds-MCE2619572.1;Parent=gene-LVR01_10250;Dbxref=NCBI_GP:MCE2619572.1;Name=MCE2619572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10250;product=hypothetical protein;protein_id=MCE2619572.1;transl_table=11 JAJSBG010000053.1 Genbank gene 9555 9860 . + . ID=gene-LVR01_10255;Name=LVR01_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10255 JAJSBG010000053.1 Protein Homology CDS 9555 9860 . + 0 ID=cds-MCE2619573.1;Parent=gene-LVR01_10255;Dbxref=NCBI_GP:MCE2619573.1;Name=MCE2619573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875947.1;locus_tag=LVR01_10255;product=hypothetical protein;protein_id=MCE2619573.1;transl_table=11 JAJSBG010000053.1 Genbank gene 10018 10278 . + . ID=gene-LVR01_10260;Name=LVR01_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10260 JAJSBG010000053.1 Protein Homology CDS 10018 10278 . + 0 ID=cds-MCE2619574.1;Parent=gene-LVR01_10260;Dbxref=NCBI_GP:MCE2619574.1;Name=MCE2619574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819325.1;locus_tag=LVR01_10260;product=DUF1372 family protein;protein_id=MCE2619574.1;transl_table=11 ##sequence-region JAJSBG010000054.1 1 9990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000054.1 Genbank region 1 9990 . + . ID=JAJSBG010000054.1:1..9990;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000054.1 Genbank gene 176 1168 . - . ID=gene-LVR01_10265;Name=cbpJ;gbkey=Gene;gene=cbpJ;gene_biotype=protein_coding;locus_tag=LVR01_10265 JAJSBG010000054.1 Protein Homology CDS 176 1168 . - 0 ID=cds-MCE2619575.1;Parent=gene-LVR01_10265;Dbxref=NCBI_GP:MCE2619575.1;Name=MCE2619575.1;gbkey=CDS;gene=cbpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698047.1;locus_tag=LVR01_10265;product=choline-binding protein CbpJ;protein_id=MCE2619575.1;transl_table=11 JAJSBG010000054.1 Genbank gene 1186 2229 . - . ID=gene-LVR01_10270;Name=LVR01_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10270 JAJSBG010000054.1 Protein Homology CDS 1186 2229 . - 0 ID=cds-MCE2619576.1;Parent=gene-LVR01_10270;Dbxref=NCBI_GP:MCE2619576.1;Name=MCE2619576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844251.1;locus_tag=LVR01_10270;product=trypsin-like peptidase domain-containing protein;protein_id=MCE2619576.1;transl_table=11 JAJSBG010000054.1 Genbank gene 2656 3156 . - . ID=gene-LVR01_10275;Name=LVR01_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10275 JAJSBG010000054.1 Protein Homology CDS 2656 3156 . - 0 ID=cds-MCE2619577.1;Parent=gene-LVR01_10275;Dbxref=NCBI_GP:MCE2619577.1;Name=MCE2619577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020296.2;locus_tag=LVR01_10275;product=DNA alkylation repair protein;protein_id=MCE2619577.1;transl_table=11 JAJSBG010000054.1 Genbank pseudogene 3078 3318 . - . ID=gene-LVR01_10280;Name=LVR01_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10280;pseudo=true JAJSBG010000054.1 Protein Homology CDS 3078 3318 . - 0 ID=cds-LVR01_10280;Parent=gene-LVR01_10280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812384.1;locus_tag=LVR01_10280;product=DNA alkylation repair protein;pseudo=true;transl_table=11 JAJSBG010000054.1 Genbank gene 3319 3951 . - . ID=gene-LVR01_10285;Name=LVR01_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10285 JAJSBG010000054.1 Protein Homology CDS 3319 3951 . - 0 ID=cds-MCE2619578.1;Parent=gene-LVR01_10285;Dbxref=NCBI_GP:MCE2619578.1;Name=MCE2619578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698412.1;locus_tag=LVR01_10285;product=response regulator transcription factor;protein_id=MCE2619578.1;transl_table=11 JAJSBG010000054.1 Genbank gene 3965 4960 . - . ID=gene-LVR01_10290;Name=LVR01_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10290 JAJSBG010000054.1 Protein Homology CDS 3965 4960 . - 0 ID=cds-MCE2619579.1;Parent=gene-LVR01_10290;Dbxref=NCBI_GP:MCE2619579.1;Name=MCE2619579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743650.1;locus_tag=LVR01_10290;product=sensor histidine kinase;protein_id=MCE2619579.1;transl_table=11 JAJSBG010000054.1 Genbank gene 4957 5655 . - . ID=gene-LVR01_10295;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=LVR01_10295 JAJSBG010000054.1 Protein Homology CDS 4957 5655 . - 0 ID=cds-MCE2619580.1;Parent=gene-LVR01_10295;Dbxref=NCBI_GP:MCE2619580.1;Name=MCE2619580.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224647.1;locus_tag=LVR01_10295;product=cell wall-active antibiotics response protein LiaF;protein_id=MCE2619580.1;transl_table=11 JAJSBG010000054.1 Genbank gene 5732 6742 . - . ID=gene-LVR01_10300;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LVR01_10300 JAJSBG010000054.1 Protein Homology CDS 5732 6742 . - 0 ID=cds-MCE2619581.1;Parent=gene-LVR01_10300;Dbxref=NCBI_GP:MCE2619581.1;Name=MCE2619581.1;gbkey=CDS;gene=fni;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210649.1;locus_tag=LVR01_10300;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=MCE2619581.1;transl_table=11 JAJSBG010000054.1 Genbank gene 6726 7733 . - . ID=gene-LVR01_10305;Name=LVR01_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10305 JAJSBG010000054.1 Protein Homology CDS 6726 7733 . - 0 ID=cds-MCE2619582.1;Parent=gene-LVR01_10305;Dbxref=NCBI_GP:MCE2619582.1;Name=MCE2619582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000562378.1;locus_tag=LVR01_10305;product=phosphomevalonate kinase;protein_id=MCE2619582.1;transl_table=11 JAJSBG010000054.1 Genbank gene 7720 8673 . - . ID=gene-LVR01_10310;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=LVR01_10310 JAJSBG010000054.1 Protein Homology CDS 7720 8673 . - 0 ID=cds-MCE2619583.1;Parent=gene-LVR01_10310;Dbxref=NCBI_GP:MCE2619583.1;Name=MCE2619583.1;gbkey=CDS;gene=mvaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373478.1;locus_tag=LVR01_10310;product=diphosphomevalonate decarboxylase;protein_id=MCE2619583.1;transl_table=11 JAJSBG010000054.1 Genbank gene 8655 9533 . - . ID=gene-LVR01_10315;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=LVR01_10315 JAJSBG010000054.1 Protein Homology CDS 8655 9533 . - 0 ID=cds-MCE2619584.1;Parent=gene-LVR01_10315;Dbxref=NCBI_GP:MCE2619584.1;Name=MCE2619584.1;gbkey=CDS;gene=mvk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163319.1;locus_tag=LVR01_10315;product=mevalonate kinase;protein_id=MCE2619584.1;transl_table=11 JAJSBG010000054.1 Genbank pseudogene 9654 9934 . - . ID=gene-LVR01_10320;Name=LVR01_10320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10320;pseudo=true JAJSBG010000054.1 Protein Homology CDS 9654 9934 . - 0 ID=cds-LVR01_10320;Parent=gene-LVR01_10320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263234.1;locus_tag=LVR01_10320;product=transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000055.1 1 8774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000055.1 Genbank region 1 8774 . + . ID=JAJSBG010000055.1:1..8774;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000055.1 Genbank gene 180 2030 . - . ID=gene-LVR01_10325;Name=LVR01_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10325 JAJSBG010000055.1 Protein Homology CDS 180 2030 . - 0 ID=cds-MCE2619585.1;Parent=gene-LVR01_10325;Dbxref=NCBI_GP:MCE2619585.1;Name=MCE2619585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035735.1;locus_tag=LVR01_10325;product=polysaccharide biosynthesis protein;protein_id=MCE2619585.1;transl_table=11 JAJSBG010000055.1 Genbank pseudogene 2084 3228 . - . ID=gene-LVR01_10330;Name=LVR01_10330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10330;pseudo=true JAJSBG010000055.1 Protein Homology CDS 2084 3228 . - 0 ID=cds-LVR01_10330;Parent=gene-LVR01_10330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096189.1;locus_tag=LVR01_10330;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JAJSBG010000055.1 Genbank gene 3286 4452 . + . ID=gene-LVR01_10335;Name=LVR01_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10335 JAJSBG010000055.1 Protein Homology CDS 3286 4452 . + 0 ID=cds-MCE2619586.1;Parent=gene-LVR01_10335;Dbxref=NCBI_GP:MCE2619586.1;Name=MCE2619586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254936.1;locus_tag=LVR01_10335;product=CynX/NimT family MFS transporter;protein_id=MCE2619586.1;transl_table=11 JAJSBG010000055.1 Genbank gene 4591 4917 . + . ID=gene-LVR01_10340;Name=LVR01_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10340 JAJSBG010000055.1 Protein Homology CDS 4591 4917 . + 0 ID=cds-MCE2619587.1;Parent=gene-LVR01_10340;Dbxref=NCBI_GP:MCE2619587.1;Name=MCE2619587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273865.1;locus_tag=LVR01_10340;product=PadR family transcriptional regulator;protein_id=MCE2619587.1;transl_table=11 JAJSBG010000055.1 Genbank gene 4904 5497 . + . ID=gene-LVR01_10345;Name=LVR01_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10345 JAJSBG010000055.1 Protein Homology CDS 4904 5497 . + 0 ID=cds-MCE2619588.1;Parent=gene-LVR01_10345;Dbxref=NCBI_GP:MCE2619588.1;Name=MCE2619588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198695.1;locus_tag=LVR01_10345;product=DUF1700 domain-containing protein;protein_id=MCE2619588.1;transl_table=11 JAJSBG010000055.1 Genbank gene 5490 6401 . + . ID=gene-LVR01_10350;Name=LVR01_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10350 JAJSBG010000055.1 Protein Homology CDS 5490 6401 . + 0 ID=cds-MCE2619589.1;Parent=gene-LVR01_10350;Dbxref=NCBI_GP:MCE2619589.1;Name=MCE2619589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233690.1;locus_tag=LVR01_10350;product=DUF4097 domain-containing protein;protein_id=MCE2619589.1;transl_table=11 JAJSBG010000055.1 Genbank gene 6464 7528 . + . ID=gene-LVR01_10355;Name=LVR01_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10355 JAJSBG010000055.1 Protein Homology CDS 6464 7528 . + 0 ID=cds-MCE2619590.1;Parent=gene-LVR01_10355;Dbxref=NCBI_GP:MCE2619590.1;Name=MCE2619590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808437.1;locus_tag=LVR01_10355;product=hypothetical protein;protein_id=MCE2619590.1;transl_table=11 JAJSBG010000055.1 Genbank gene 7525 7677 . - . ID=gene-LVR01_10360;Name=LVR01_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10360 JAJSBG010000055.1 GeneMarkS-2+ CDS 7525 7677 . - 0 ID=cds-MCE2619591.1;Parent=gene-LVR01_10360;Dbxref=NCBI_GP:MCE2619591.1;Name=MCE2619591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10360;product=hypothetical protein;protein_id=MCE2619591.1;transl_table=11 JAJSBG010000055.1 Genbank gene 7751 8611 . - . ID=gene-LVR01_10365;Name=LVR01_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10365 JAJSBG010000055.1 Protein Homology CDS 7751 8611 . - 0 ID=cds-MCE2619592.1;Parent=gene-LVR01_10365;Dbxref=NCBI_GP:MCE2619592.1;Name=MCE2619592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140341.1;locus_tag=LVR01_10365;product=DUF4299 domain-containing protein;protein_id=MCE2619592.1;transl_table=11 ##sequence-region JAJSBG010000056.1 1 8198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000056.1 Genbank region 1 8198 . + . ID=JAJSBG010000056.1:1..8198;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000056.1 Genbank pseudogene 1 214 . - . ID=gene-LVR01_10370;Name=LVR01_10370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10370;pseudo=true JAJSBG010000056.1 Protein Homology CDS 1 214 . - 0 ID=cds-LVR01_10370;Parent=gene-LVR01_10370;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_10370;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000056.1 Genbank gene 421 615 . + . ID=gene-LVR01_10375;Name=LVR01_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10375 JAJSBG010000056.1 Protein Homology CDS 421 615 . + 0 ID=cds-MCE2619593.1;Parent=gene-LVR01_10375;Dbxref=NCBI_GP:MCE2619593.1;Name=MCE2619593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082472.1;locus_tag=LVR01_10375;product=helix-turn-helix transcriptional regulator;protein_id=MCE2619593.1;transl_table=11 JAJSBG010000056.1 Genbank pseudogene 631 1172 . + . ID=gene-LVR01_10380;Name=LVR01_10380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10380;pseudo=true JAJSBG010000056.1 Protein Homology CDS 631 1172 . + 0 ID=cds-LVR01_10380;Parent=gene-LVR01_10380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712356.1;locus_tag=LVR01_10380;product=DUF3278 domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000056.1 Genbank gene 1183 1425 . + . ID=gene-LVR01_10385;Name=LVR01_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10385 JAJSBG010000056.1 Protein Homology CDS 1183 1425 . + 0 ID=cds-MCE2619594.1;Parent=gene-LVR01_10385;Dbxref=NCBI_GP:MCE2619594.1;Name=MCE2619594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711734.1;locus_tag=LVR01_10385;product=hypothetical protein;protein_id=MCE2619594.1;transl_table=11 JAJSBG010000056.1 Genbank gene 1436 1762 . + . ID=gene-LVR01_10390;Name=LVR01_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10390 JAJSBG010000056.1 Protein Homology CDS 1436 1762 . + 0 ID=cds-MCE2619595.1;Parent=gene-LVR01_10390;Dbxref=NCBI_GP:MCE2619595.1;Name=MCE2619595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839383.1;locus_tag=LVR01_10390;product=hypothetical protein;protein_id=MCE2619595.1;transl_table=11 JAJSBG010000056.1 Genbank gene 1789 2367 . + . ID=gene-LVR01_10395;Name=LVR01_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10395 JAJSBG010000056.1 Protein Homology CDS 1789 2367 . + 0 ID=cds-MCE2619596.1;Parent=gene-LVR01_10395;Dbxref=NCBI_GP:MCE2619596.1;Name=MCE2619596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710702.1;locus_tag=LVR01_10395;product=DUF3278 domain-containing protein;protein_id=MCE2619596.1;transl_table=11 JAJSBG010000056.1 Genbank gene 2364 2840 . + . ID=gene-LVR01_10400;Name=LVR01_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10400 JAJSBG010000056.1 Protein Homology CDS 2364 2840 . + 0 ID=cds-MCE2619597.1;Parent=gene-LVR01_10400;Dbxref=NCBI_GP:MCE2619597.1;Name=MCE2619597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398949.1;locus_tag=LVR01_10400;product=glutathione peroxidase;protein_id=MCE2619597.1;transl_table=11 JAJSBG010000056.1 Genbank gene 3062 5275 . - . ID=gene-LVR01_10405;Name=LVR01_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10405 JAJSBG010000056.1 Protein Homology CDS 3062 5275 . - 0 ID=cds-MCE2619598.1;Parent=gene-LVR01_10405;Dbxref=NCBI_GP:MCE2619598.1;Name=MCE2619598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688702.1;locus_tag=LVR01_10405;product=alpha-xylosidase;protein_id=MCE2619598.1;transl_table=11 JAJSBG010000056.1 Genbank gene 5676 5852 . - . ID=gene-LVR01_10410;Name=LVR01_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10410 JAJSBG010000056.1 Protein Homology CDS 5676 5852 . - 0 ID=cds-MCE2619599.1;Parent=gene-LVR01_10410;Dbxref=NCBI_GP:MCE2619599.1;Name=MCE2619599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866213.1;locus_tag=LVR01_10410;product=hypothetical protein;protein_id=MCE2619599.1;transl_table=11 JAJSBG010000056.1 Genbank gene 6257 7465 . + . ID=gene-LVR01_10415;Name=LVR01_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10415 JAJSBG010000056.1 Protein Homology CDS 6257 7465 . + 0 ID=cds-MCE2619600.1;Parent=gene-LVR01_10415;Dbxref=NCBI_GP:MCE2619600.1;Name=MCE2619600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865288.1;locus_tag=LVR01_10415;product=ATP-binding protein;protein_id=MCE2619600.1;transl_table=11 JAJSBG010000056.1 Genbank gene 7897 8198 . - . ID=gene-LVR01_10420;Name=LVR01_10420;end_range=8198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10420;partial=true JAJSBG010000056.1 Protein Homology CDS 7897 8198 . - 2 ID=cds-MCE2619601.1;Parent=gene-LVR01_10420;Dbxref=NCBI_GP:MCE2619601.1;Name=MCE2619601.1;end_range=8198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093609.1;locus_tag=LVR01_10420;partial=true;product=XRE family transcriptional regulator;protein_id=MCE2619601.1;transl_table=11 ##sequence-region JAJSBG010000057.1 1 8185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000057.1 Genbank region 1 8185 . + . ID=JAJSBG010000057.1:1..8185;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000057.1 Genbank gene 65 292 . + . ID=gene-LVR01_10425;Name=LVR01_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10425 JAJSBG010000057.1 GeneMarkS-2+ CDS 65 292 . + 0 ID=cds-MCE2619602.1;Parent=gene-LVR01_10425;Dbxref=NCBI_GP:MCE2619602.1;Name=MCE2619602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10425;product=hypothetical protein;protein_id=MCE2619602.1;transl_table=11 JAJSBG010000057.1 Genbank gene 336 1451 . + . ID=gene-LVR01_10430;Name=LVR01_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10430 JAJSBG010000057.1 Protein Homology CDS 336 1451 . + 0 ID=cds-MCE2619603.1;Parent=gene-LVR01_10430;Dbxref=NCBI_GP:MCE2619603.1;Name=MCE2619603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009495548.1;locus_tag=LVR01_10430;product=DNA cytosine methyltransferase;protein_id=MCE2619603.1;transl_table=11 JAJSBG010000057.1 Genbank gene 1481 2692 . - . ID=gene-LVR01_10435;Name=LVR01_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10435 JAJSBG010000057.1 Protein Homology CDS 1481 2692 . - 0 ID=cds-MCE2619604.1;Parent=gene-LVR01_10435;Dbxref=NCBI_GP:MCE2619604.1;Name=MCE2619604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015926228.1;locus_tag=LVR01_10435;product=MspI family type II restriction endonuclease;protein_id=MCE2619604.1;transl_table=11 JAJSBG010000057.1 Genbank gene 2851 4413 . - . ID=gene-LVR01_10440;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LVR01_10440 JAJSBG010000057.1 Protein Homology CDS 2851 4413 . - 0 ID=cds-MCE2619605.1;Parent=gene-LVR01_10440;Dbxref=NCBI_GP:MCE2619605.1;Name=MCE2619605.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065723.1;locus_tag=LVR01_10440;product=glutamine-hydrolyzing GMP synthase;protein_id=MCE2619605.1;transl_table=11 JAJSBG010000057.1 Genbank gene 4555 5253 . + . ID=gene-LVR01_10445;Name=LVR01_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10445 JAJSBG010000057.1 Protein Homology CDS 4555 5253 . + 0 ID=cds-MCE2619606.1;Parent=gene-LVR01_10445;Dbxref=NCBI_GP:MCE2619606.1;Name=MCE2619606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936186.1;locus_tag=LVR01_10445;product=GntR family transcriptional regulator;protein_id=MCE2619606.1;transl_table=11 JAJSBG010000057.1 Genbank gene 5403 6299 . - . ID=gene-LVR01_10450;Name=LVR01_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10450 JAJSBG010000057.1 Protein Homology CDS 5403 6299 . - 0 ID=cds-MCE2619607.1;Parent=gene-LVR01_10450;Dbxref=NCBI_GP:MCE2619607.1;Name=MCE2619607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071673.1;locus_tag=LVR01_10450;product=DMT family transporter;protein_id=MCE2619607.1;transl_table=11 JAJSBG010000057.1 Genbank gene 6308 7243 . - . ID=gene-LVR01_10455;Name=LVR01_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10455 JAJSBG010000057.1 Protein Homology CDS 6308 7243 . - 0 ID=cds-MCE2619608.1;Parent=gene-LVR01_10455;Dbxref=NCBI_GP:MCE2619608.1;Name=MCE2619608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872223.1;locus_tag=LVR01_10455;product=beta-lactamase family protein;protein_id=MCE2619608.1;transl_table=11 JAJSBG010000057.1 Genbank gene 7240 7965 . - . ID=gene-LVR01_10460;Name=LVR01_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10460 JAJSBG010000057.1 Protein Homology CDS 7240 7965 . - 0 ID=cds-MCE2619609.1;Parent=gene-LVR01_10460;Dbxref=NCBI_GP:MCE2619609.1;Name=MCE2619609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102210.1;locus_tag=LVR01_10460;product=CppA family protein;protein_id=MCE2619609.1;transl_table=11 ##sequence-region JAJSBG010000058.1 1 7947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000058.1 Genbank region 1 7947 . + . ID=JAJSBG010000058.1:1..7947;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000058.1 Genbank gene 287 523 . + . ID=gene-LVR01_10465;Name=comW;gbkey=Gene;gene=comW;gene_biotype=protein_coding;locus_tag=LVR01_10465 JAJSBG010000058.1 Protein Homology CDS 287 523 . + 0 ID=cds-MCE2619610.1;Parent=gene-LVR01_10465;Dbxref=NCBI_GP:MCE2619610.1;Name=MCE2619610.1;gbkey=CDS;gene=comW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846364.1;locus_tag=LVR01_10465;product=sigma(X)-activator ComW;protein_id=MCE2619610.1;transl_table=11 JAJSBG010000058.1 Genbank gene 754 2040 . + . ID=gene-LVR01_10470;Name=LVR01_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10470 JAJSBG010000058.1 Protein Homology CDS 754 2040 . + 0 ID=cds-MCE2619611.1;Parent=gene-LVR01_10470;Dbxref=NCBI_GP:MCE2619611.1;Name=MCE2619611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205044.1;locus_tag=LVR01_10470;product=adenylosuccinate synthase;protein_id=MCE2619611.1;transl_table=11 JAJSBG010000058.1 Genbank gene 2240 2707 . + . ID=gene-LVR01_10475;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LVR01_10475 JAJSBG010000058.1 Protein Homology CDS 2240 2707 . + 0 ID=cds-MCE2619612.1;Parent=gene-LVR01_10475;Dbxref=NCBI_GP:MCE2619612.1;Name=MCE2619612.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397786.1;locus_tag=LVR01_10475;product=tRNA adenosine(34) deaminase TadA;protein_id=MCE2619612.1;transl_table=11 JAJSBG010000058.1 Genbank gene 2740 2837 . + . ID=gene-LVR01_10480;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LVR01_10480 JAJSBG010000058.1 cmsearch SRP_RNA 2740 2837 . + . ID=rna-LVR01_10480;Parent=gene-LVR01_10480;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10480;product=signal recognition particle sRNA small type JAJSBG010000058.1 cmsearch exon 2740 2837 . + . ID=exon-LVR01_10480-1;Parent=rna-LVR01_10480;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10480;product=signal recognition particle sRNA small type JAJSBG010000058.1 Genbank gene 2894 3337 . + . ID=gene-LVR01_10485;Name=LVR01_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10485 JAJSBG010000058.1 Protein Homology CDS 2894 3337 . + 0 ID=cds-MCE2619613.1;Parent=gene-LVR01_10485;Dbxref=NCBI_GP:MCE2619613.1;Name=MCE2619613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701981.1;locus_tag=LVR01_10485;product=dUTP diphosphatase;protein_id=MCE2619613.1;transl_table=11 JAJSBG010000058.1 Genbank gene 3297 3854 . + . ID=gene-LVR01_10490;Name=LVR01_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10490 JAJSBG010000058.1 Protein Homology CDS 3297 3854 . + 0 ID=cds-MCE2619614.1;Parent=gene-LVR01_10490;Dbxref=NCBI_GP:MCE2619614.1;Name=MCE2619614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863573.1;locus_tag=LVR01_10490;product=phosphoglycerate mutase family protein;protein_id=MCE2619614.1;transl_table=11 JAJSBG010000058.1 Genbank gene 3865 5229 . + . ID=gene-LVR01_10495;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LVR01_10495 JAJSBG010000058.1 Protein Homology CDS 3865 5229 . + 0 ID=cds-MCE2619615.1;Parent=gene-LVR01_10495;Dbxref=NCBI_GP:MCE2619615.1;Name=MCE2619615.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016893792.1;locus_tag=LVR01_10495;product=DNA repair protein RadA;protein_id=MCE2619615.1;transl_table=11 JAJSBG010000058.1 Genbank gene 5302 5799 . + . ID=gene-LVR01_10500;Name=LVR01_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10500 JAJSBG010000058.1 Protein Homology CDS 5302 5799 . + 0 ID=cds-MCE2619616.1;Parent=gene-LVR01_10500;Dbxref=NCBI_GP:MCE2619616.1;Name=MCE2619616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285146.1;locus_tag=LVR01_10500;product=carbonic anhydrase;protein_id=MCE2619616.1;transl_table=11 JAJSBG010000058.1 Genbank gene 5820 6635 . + . ID=gene-LVR01_10505;Name=LVR01_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10505 JAJSBG010000058.1 Protein Homology CDS 5820 6635 . + 0 ID=cds-MCE2619617.1;Parent=gene-LVR01_10505;Dbxref=NCBI_GP:MCE2619617.1;Name=MCE2619617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272769.1;locus_tag=LVR01_10505;product=PrsW family intramembrane metalloprotease;protein_id=MCE2619617.1;transl_table=11 JAJSBG010000058.1 Genbank gene 6780 7748 . + . ID=gene-LVR01_10510;Name=LVR01_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10510 JAJSBG010000058.1 Protein Homology CDS 6780 7748 . + 0 ID=cds-MCE2619618.1;Parent=gene-LVR01_10510;Dbxref=NCBI_GP:MCE2619618.1;Name=MCE2619618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149122.1;locus_tag=LVR01_10510;product=ribose-phosphate diphosphokinase;protein_id=MCE2619618.1;transl_table=11 JAJSBG010000058.1 Genbank gene 7805 7947 . - . ID=gene-LVR01_10515;Name=LVR01_10515;end_range=7947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10515;partial=true JAJSBG010000058.1 Protein Homology CDS 7805 7947 . - 2 ID=cds-MCE2619619.1;Parent=gene-LVR01_10515;Dbxref=NCBI_GP:MCE2619619.1;Name=MCE2619619.1;end_range=7947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=LVR01_10515;partial=true;product=transposase;protein_id=MCE2619619.1;transl_table=11 ##sequence-region JAJSBG010000059.1 1 7906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000059.1 Genbank region 1 7906 . + . ID=JAJSBG010000059.1:1..7906;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000059.1 Genbank gene 59 131 . + . ID=gene-LVR01_10520;Name=LVR01_10520;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10520 JAJSBG010000059.1 tRNAscan-SE tRNA 59 131 . + . ID=rna-LVR01_10520;Parent=gene-LVR01_10520;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10520;product=tRNA-Val JAJSBG010000059.1 tRNAscan-SE exon 59 131 . + . ID=exon-LVR01_10520-1;Parent=rna-LVR01_10520;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10520;product=tRNA-Val JAJSBG010000059.1 Genbank gene 137 207 . + . ID=gene-LVR01_10525;Name=LVR01_10525;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10525 JAJSBG010000059.1 tRNAscan-SE tRNA 137 207 . + . ID=rna-LVR01_10525;Parent=gene-LVR01_10525;anticodon=(pos:169..171);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10525;product=tRNA-Gly JAJSBG010000059.1 tRNAscan-SE exon 137 207 . + . ID=exon-LVR01_10525-1;Parent=rna-LVR01_10525;anticodon=(pos:169..171);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10525;product=tRNA-Gly JAJSBG010000059.1 Genbank gene 242 315 . + . ID=gene-LVR01_10530;Name=LVR01_10530;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10530 JAJSBG010000059.1 tRNAscan-SE tRNA 242 315 . + . ID=rna-LVR01_10530;Parent=gene-LVR01_10530;anticodon=(pos:276..278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10530;product=tRNA-Ile JAJSBG010000059.1 tRNAscan-SE exon 242 315 . + . ID=exon-LVR01_10530-1;Parent=rna-LVR01_10530;anticodon=(pos:276..278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10530;product=tRNA-Ile JAJSBG010000059.1 Genbank gene 398 487 . + . ID=gene-LVR01_10535;Name=LVR01_10535;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10535 JAJSBG010000059.1 tRNAscan-SE tRNA 398 487 . + . ID=rna-LVR01_10535;Parent=gene-LVR01_10535;anticodon=(pos:434..436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10535;product=tRNA-Ser JAJSBG010000059.1 tRNAscan-SE exon 398 487 . + . ID=exon-LVR01_10535-1;Parent=rna-LVR01_10535;anticodon=(pos:434..436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10535;product=tRNA-Ser JAJSBG010000059.1 Genbank gene 498 571 . + . ID=gene-LVR01_10540;Name=LVR01_10540;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10540 JAJSBG010000059.1 tRNAscan-SE tRNA 498 571 . + . ID=rna-LVR01_10540;Parent=gene-LVR01_10540;anticodon=(pos:532..534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10540;product=tRNA-Met JAJSBG010000059.1 tRNAscan-SE exon 498 571 . + . ID=exon-LVR01_10540-1;Parent=rna-LVR01_10540;anticodon=(pos:532..534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10540;product=tRNA-Met JAJSBG010000059.1 Genbank gene 575 647 . + . ID=gene-LVR01_10545;Name=LVR01_10545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10545 JAJSBG010000059.1 tRNAscan-SE tRNA 575 647 . + . ID=rna-LVR01_10545;Parent=gene-LVR01_10545;anticodon=(pos:608..610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10545;product=tRNA-Phe JAJSBG010000059.1 tRNAscan-SE exon 575 647 . + . ID=exon-LVR01_10545-1;Parent=rna-LVR01_10545;anticodon=(pos:608..610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10545;product=tRNA-Phe JAJSBG010000059.1 Genbank gene 660 740 . + . ID=gene-LVR01_10550;Name=LVR01_10550;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10550 JAJSBG010000059.1 tRNAscan-SE tRNA 660 740 . + . ID=rna-LVR01_10550;Parent=gene-LVR01_10550;anticodon=(pos:694..696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10550;product=tRNA-Tyr JAJSBG010000059.1 tRNAscan-SE exon 660 740 . + . ID=exon-LVR01_10550-1;Parent=rna-LVR01_10550;anticodon=(pos:694..696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10550;product=tRNA-Tyr JAJSBG010000059.1 Genbank gene 745 815 . + . ID=gene-LVR01_10555;Name=LVR01_10555;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10555 JAJSBG010000059.1 tRNAscan-SE tRNA 745 815 . + . ID=rna-LVR01_10555;Parent=gene-LVR01_10555;anticodon=(pos:777..779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10555;product=tRNA-Trp JAJSBG010000059.1 tRNAscan-SE exon 745 815 . + . ID=exon-LVR01_10555-1;Parent=rna-LVR01_10555;anticodon=(pos:777..779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10555;product=tRNA-Trp JAJSBG010000059.1 Genbank gene 830 902 . + . ID=gene-LVR01_10560;Name=LVR01_10560;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10560 JAJSBG010000059.1 tRNAscan-SE tRNA 830 902 . + . ID=rna-LVR01_10560;Parent=gene-LVR01_10560;anticodon=(pos:863..865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10560;product=tRNA-His JAJSBG010000059.1 tRNAscan-SE exon 830 902 . + . ID=exon-LVR01_10560-1;Parent=rna-LVR01_10560;anticodon=(pos:863..865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10560;product=tRNA-His JAJSBG010000059.1 Genbank gene 916 987 . + . ID=gene-LVR01_10565;Name=LVR01_10565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10565 JAJSBG010000059.1 tRNAscan-SE tRNA 916 987 . + . ID=rna-LVR01_10565;Parent=gene-LVR01_10565;anticodon=(pos:948..950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10565;product=tRNA-Gln JAJSBG010000059.1 tRNAscan-SE exon 916 987 . + . ID=exon-LVR01_10565-1;Parent=rna-LVR01_10565;anticodon=(pos:948..950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10565;product=tRNA-Gln JAJSBG010000059.1 Genbank gene 997 1080 . + . ID=gene-LVR01_10570;Name=LVR01_10570;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10570 JAJSBG010000059.1 tRNAscan-SE tRNA 997 1080 . + . ID=rna-LVR01_10570;Parent=gene-LVR01_10570;anticodon=(pos:1031..1033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10570;product=tRNA-Leu JAJSBG010000059.1 tRNAscan-SE exon 997 1080 . + . ID=exon-LVR01_10570-1;Parent=rna-LVR01_10570;anticodon=(pos:1031..1033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10570;product=tRNA-Leu JAJSBG010000059.1 Genbank gene 1188 2465 . + . ID=gene-LVR01_10575;Name=LVR01_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10575 JAJSBG010000059.1 Protein Homology CDS 1188 2465 . + 0 ID=cds-MCE2619620.1;Parent=gene-LVR01_10575;Dbxref=NCBI_GP:MCE2619620.1;Name=MCE2619620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277926.1;locus_tag=LVR01_10575;product=gamma-glutamylcysteine synthetase;protein_id=MCE2619620.1;transl_table=11 JAJSBG010000059.1 Genbank gene 2542 4026 . + . ID=gene-LVR01_10580;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LVR01_10580 JAJSBG010000059.1 Protein Homology CDS 2542 4026 . + 0 ID=cds-MCE2619621.1;Parent=gene-LVR01_10580;Dbxref=NCBI_GP:MCE2619621.1;Name=MCE2619621.1;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595200.1;locus_tag=LVR01_10580;product=threonine synthase;protein_id=MCE2619621.1;transl_table=11 JAJSBG010000059.1 Genbank gene 4087 5367 . + . ID=gene-LVR01_10585;Name=LVR01_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10585 JAJSBG010000059.1 Protein Homology CDS 4087 5367 . + 0 ID=cds-MCE2619622.1;Parent=gene-LVR01_10585;Dbxref=NCBI_GP:MCE2619622.1;Name=MCE2619622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473957.1;locus_tag=LVR01_10585;product=MATE family efflux transporter;protein_id=MCE2619622.1;transl_table=11 JAJSBG010000059.1 Genbank gene 5371 5994 . + . ID=gene-LVR01_10590;Name=LVR01_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10590 JAJSBG010000059.1 Protein Homology CDS 5371 5994 . + 0 ID=cds-MCE2619623.1;Parent=gene-LVR01_10590;Dbxref=NCBI_GP:MCE2619623.1;Name=MCE2619623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172831.1;locus_tag=LVR01_10590;product=HAD family hydrolase;protein_id=MCE2619623.1;transl_table=11 JAJSBG010000059.1 Genbank gene 6157 7335 . + . ID=gene-LVR01_10595;Name=LVR01_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10595 JAJSBG010000059.1 Protein Homology CDS 6157 7335 . + 0 ID=cds-MCE2619624.1;Parent=gene-LVR01_10595;Dbxref=NCBI_GP:MCE2619624.1;Name=MCE2619624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746996.1;locus_tag=LVR01_10595;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MCE2619624.1;transl_table=11 JAJSBG010000059.1 Genbank gene 7607 7906 . - . ID=gene-LVR01_10600;Name=LVR01_10600;end_range=7906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10600;partial=true JAJSBG010000059.1 Protein Homology CDS 7607 7906 . - 0 ID=cds-MCE2619625.1;Parent=gene-LVR01_10600;Dbxref=NCBI_GP:MCE2619625.1;Name=MCE2619625.1;end_range=7906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_10600;partial=true;product=transposase;protein_id=MCE2619625.1;transl_table=11 ##sequence-region JAJSBG010000005.1 1 70720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000005.1 Genbank region 1 70720 . + . ID=JAJSBG010000005.1:1..70720;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000005.1 Genbank gene 107 865 . - . ID=gene-LVR01_02485;Name=LVR01_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02485 JAJSBG010000005.1 Protein Homology CDS 107 865 . - 0 ID=cds-MCE2618164.1;Parent=gene-LVR01_02485;Dbxref=NCBI_GP:MCE2618164.1;Name=MCE2618164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125420.1;locus_tag=LVR01_02485;product=ABC transporter ATP-binding protein;protein_id=MCE2618164.1;transl_table=11 JAJSBG010000005.1 Genbank gene 862 1728 . - . ID=gene-LVR01_02490;Name=LVR01_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02490 JAJSBG010000005.1 Protein Homology CDS 862 1728 . - 0 ID=cds-MCE2618165.1;Parent=gene-LVR01_02490;Dbxref=NCBI_GP:MCE2618165.1;Name=MCE2618165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399556.1;locus_tag=LVR01_02490;product=ABC transporter permease;protein_id=MCE2618165.1;transl_table=11 JAJSBG010000005.1 Genbank gene 1797 2801 . - . ID=gene-LVR01_02495;Name=LVR01_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02495 JAJSBG010000005.1 Protein Homology CDS 1797 2801 . - 0 ID=cds-MCE2618166.1;Parent=gene-LVR01_02495;Dbxref=NCBI_GP:MCE2618166.1;Name=MCE2618166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398145.1;locus_tag=LVR01_02495;product=ABC transporter substrate-binding protein;protein_id=MCE2618166.1;transl_table=11 JAJSBG010000005.1 Genbank gene 2843 2989 . - . ID=gene-LVR01_02500;Name=LVR01_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02500 JAJSBG010000005.1 GeneMarkS-2+ CDS 2843 2989 . - 0 ID=cds-MCE2618167.1;Parent=gene-LVR01_02500;Dbxref=NCBI_GP:MCE2618167.1;Name=MCE2618167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_02500;product=hypothetical protein;protein_id=MCE2618167.1;transl_table=11 JAJSBG010000005.1 cmsearch binding_site 3066 3283 . - . ID=id-JAJSBG010000005.1:3066..3283;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000005.1 Genbank gene 3353 6049 . - . ID=gene-LVR01_02505;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LVR01_02505 JAJSBG010000005.1 Protein Homology CDS 3353 6049 . - 0 ID=cds-MCE2618168.1;Parent=gene-LVR01_02505;Dbxref=NCBI_GP:MCE2618168.1;Name=MCE2618168.1;gbkey=CDS;gene=ppc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058210.1;locus_tag=LVR01_02505;product=phosphoenolpyruvate carboxylase;protein_id=MCE2618168.1;transl_table=11 JAJSBG010000005.1 Genbank gene 6074 7297 . - . ID=gene-LVR01_02510;Name=LVR01_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02510 JAJSBG010000005.1 Protein Homology CDS 6074 7297 . - 0 ID=cds-MCE2618169.1;Parent=gene-LVR01_02510;Dbxref=NCBI_GP:MCE2618169.1;Name=MCE2618169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703348.1;locus_tag=LVR01_02510;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MCE2618169.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 7451 7768 . - . ID=gene-LVR01_02515;Name=LVR01_02515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02515;pseudo=true JAJSBG010000005.1 Protein Homology CDS 7451 7768 . - 0 ID=cds-LVR01_02515;Parent=gene-LVR01_02515;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_02515;product=transposase family protein;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 8264 9547 . - . ID=gene-LVR01_02520;Name=LVR01_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02520 JAJSBG010000005.1 Protein Homology CDS 8264 9547 . - 0 ID=cds-MCE2618170.1;Parent=gene-LVR01_02520;Dbxref=NCBI_GP:MCE2618170.1;Name=MCE2618170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782001.1;locus_tag=LVR01_02520;product=cellulose synthase;protein_id=MCE2618170.1;transl_table=11 JAJSBG010000005.1 Genbank gene 9623 9967 . - . ID=gene-LVR01_02525;Name=LVR01_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02525 JAJSBG010000005.1 Protein Homology CDS 9623 9967 . - 0 ID=cds-MCE2618171.1;Parent=gene-LVR01_02525;Dbxref=NCBI_GP:MCE2618171.1;Name=MCE2618171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127477.1;locus_tag=LVR01_02525;product=hypothetical protein;protein_id=MCE2618171.1;transl_table=11 JAJSBG010000005.1 Genbank gene 10208 10453 . - . ID=gene-LVR01_02530;Name=LVR01_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02530 JAJSBG010000005.1 Protein Homology CDS 10208 10453 . - 0 ID=cds-MCE2618172.1;Parent=gene-LVR01_02530;Dbxref=NCBI_GP:MCE2618172.1;Name=MCE2618172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536918.1;locus_tag=LVR01_02530;product=hypothetical protein;protein_id=MCE2618172.1;transl_table=11 JAJSBG010000005.1 Genbank gene 10523 10891 . - . ID=gene-LVR01_02535;Name=LVR01_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02535 JAJSBG010000005.1 GeneMarkS-2+ CDS 10523 10891 . - 0 ID=cds-MCE2618173.1;Parent=gene-LVR01_02535;Dbxref=NCBI_GP:MCE2618173.1;Name=MCE2618173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_02535;product=hypothetical protein;protein_id=MCE2618173.1;transl_table=11 JAJSBG010000005.1 Genbank gene 11022 11801 . - . ID=gene-LVR01_02540;Name=LVR01_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02540 JAJSBG010000005.1 Protein Homology CDS 11022 11801 . - 0 ID=cds-MCE2618174.1;Parent=gene-LVR01_02540;Dbxref=NCBI_GP:MCE2618174.1;Name=MCE2618174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262024.1;locus_tag=LVR01_02540;product=ATP-grasp domain-containing protein;protein_id=MCE2618174.1;transl_table=11 JAJSBG010000005.1 Genbank gene 11864 12052 . - . ID=gene-LVR01_02545;Name=LVR01_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02545 JAJSBG010000005.1 Protein Homology CDS 11864 12052 . - 0 ID=cds-MCE2618175.1;Parent=gene-LVR01_02545;Dbxref=NCBI_GP:MCE2618175.1;Name=MCE2618175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179767.1;locus_tag=LVR01_02545;product=CopG family transcriptional regulator;protein_id=MCE2618175.1;transl_table=11 JAJSBG010000005.1 Genbank gene 12373 12939 . - . ID=gene-LVR01_02550;Name=LVR01_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02550 JAJSBG010000005.1 Protein Homology CDS 12373 12939 . - 0 ID=cds-MCE2618176.1;Parent=gene-LVR01_02550;Dbxref=NCBI_GP:MCE2618176.1;Name=MCE2618176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397777.1;locus_tag=LVR01_02550;product=hypothetical protein;protein_id=MCE2618176.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 13408 14152 . - . ID=gene-LVR01_02555;Name=LVR01_02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02555;pseudo=true JAJSBG010000005.1 Protein Homology CDS 13408 14152 . - 0 ID=cds-LVR01_02555;Parent=gene-LVR01_02555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134977.1;locus_tag=LVR01_02555;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 14414 15831 . - . ID=gene-LVR01_02560;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=pseudogene;locus_tag=LVR01_02560;pseudo=true JAJSBG010000005.1 Protein Homology CDS 14414 15831 . - 0 ID=cds-LVR01_02560;Parent=gene-LVR01_02560;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gtfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638368.1;locus_tag=LVR01_02560;product=sucrose phosphorylase;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 15840 16160 . - . ID=gene-LVR01_02565;Name=LVR01_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02565 JAJSBG010000005.1 Protein Homology CDS 15840 16160 . - 0 ID=cds-MCE2618177.1;Parent=gene-LVR01_02565;Dbxref=NCBI_GP:MCE2618177.1;Name=MCE2618177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003528.1;locus_tag=LVR01_02565;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=MCE2618177.1;transl_table=11 JAJSBG010000005.1 Genbank gene 16174 17487 . - . ID=gene-LVR01_02570;Name=LVR01_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02570 JAJSBG010000005.1 Protein Homology CDS 16174 17487 . - 0 ID=cds-MCE2618178.1;Parent=gene-LVR01_02570;Dbxref=NCBI_GP:MCE2618178.1;Name=MCE2618178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003003586.1;locus_tag=LVR01_02570;product=PTS sugar transporter subunit IIC;protein_id=MCE2618178.1;transl_table=11 JAJSBG010000005.1 Genbank gene 17498 17800 . - . ID=gene-LVR01_02575;Name=LVR01_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02575 JAJSBG010000005.1 Protein Homology CDS 17498 17800 . - 0 ID=cds-MCE2618179.1;Parent=gene-LVR01_02575;Dbxref=NCBI_GP:MCE2618179.1;Name=MCE2618179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020606.1;locus_tag=LVR01_02575;product=PTS sugar transporter subunit IIB;protein_id=MCE2618179.1;transl_table=11 JAJSBG010000005.1 Genbank gene 17813 19243 . - . ID=gene-LVR01_02580;Name=LVR01_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02580 JAJSBG010000005.1 Protein Homology CDS 17813 19243 . - 0 ID=cds-MCE2618180.1;Parent=gene-LVR01_02580;Dbxref=NCBI_GP:MCE2618180.1;Name=MCE2618180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226994.1;locus_tag=LVR01_02580;product=6-phospho-beta-glucosidase;protein_id=MCE2618180.1;transl_table=11 JAJSBG010000005.1 Genbank gene 19392 20144 . - . ID=gene-LVR01_02585;Name=LVR01_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02585 JAJSBG010000005.1 Protein Homology CDS 19392 20144 . - 0 ID=cds-MCE2618181.1;Parent=gene-LVR01_02585;Dbxref=NCBI_GP:MCE2618181.1;Name=MCE2618181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014478.1;locus_tag=LVR01_02585;product=MurR/RpiR family transcriptional regulator;protein_id=MCE2618181.1;transl_table=11 JAJSBG010000005.1 Genbank gene 20153 20875 . - . ID=gene-LVR01_02590;Name=LVR01_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02590 JAJSBG010000005.1 Protein Homology CDS 20153 20875 . - 0 ID=cds-MCE2618182.1;Parent=gene-LVR01_02590;Dbxref=NCBI_GP:MCE2618182.1;Name=MCE2618182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903423.1;locus_tag=LVR01_02590;product=MurR/RpiR family transcriptional regulator;protein_id=MCE2618182.1;transl_table=11 JAJSBG010000005.1 Genbank gene 21405 22760 . - . ID=gene-LVR01_02595;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LVR01_02595 JAJSBG010000005.1 Protein Homology CDS 21405 22760 . - 0 ID=cds-MCE2618183.1;Parent=gene-LVR01_02595;Dbxref=NCBI_GP:MCE2618183.1;Name=MCE2618183.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398598.1;locus_tag=LVR01_02595;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MCE2618183.1;transl_table=11 JAJSBG010000005.1 Genbank gene 22834 23808 . - . ID=gene-LVR01_02600;Name=LVR01_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02600 JAJSBG010000005.1 Protein Homology CDS 22834 23808 . - 0 ID=cds-MCE2618184.1;Parent=gene-LVR01_02600;Dbxref=NCBI_GP:MCE2618184.1;Name=MCE2618184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227757.1;locus_tag=LVR01_02600;product=DUF1002 domain-containing protein;protein_id=MCE2618184.1;transl_table=11 JAJSBG010000005.1 Genbank gene 23882 24496 . - . ID=gene-LVR01_02605;Name=pmp23;gbkey=Gene;gene=pmp23;gene_biotype=protein_coding;locus_tag=LVR01_02605 JAJSBG010000005.1 Protein Homology CDS 23882 24496 . - 0 ID=cds-MCE2618185.1;Parent=gene-LVR01_02605;Dbxref=NCBI_GP:MCE2618185.1;Name=MCE2618185.1;gbkey=CDS;gene=pmp23;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476388.1;locus_tag=LVR01_02605;product=cell wall hydrolase Pmp23;protein_id=MCE2618185.1;transl_table=11 JAJSBG010000005.1 Genbank gene 24496 25470 . - . ID=gene-LVR01_02610;Name=LVR01_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02610 JAJSBG010000005.1 Protein Homology CDS 24496 25470 . - 0 ID=cds-MCE2618186.1;Parent=gene-LVR01_02610;Dbxref=NCBI_GP:MCE2618186.1;Name=MCE2618186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153495.1;locus_tag=LVR01_02610;product=nucleoid-associated protein;protein_id=MCE2618186.1;transl_table=11 JAJSBG010000005.1 Genbank gene 25478 26734 . - . ID=gene-LVR01_02615;Name=LVR01_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02615 JAJSBG010000005.1 Protein Homology CDS 25478 26734 . - 0 ID=cds-MCE2618187.1;Parent=gene-LVR01_02615;Dbxref=NCBI_GP:MCE2618187.1;Name=MCE2618187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863152.1;locus_tag=LVR01_02615;product=serine hydroxymethyltransferase;protein_id=MCE2618187.1;transl_table=11 JAJSBG010000005.1 Genbank gene 26797 27228 . - . ID=gene-LVR01_02620;Name=LVR01_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02620 JAJSBG010000005.1 Protein Homology CDS 26797 27228 . - 0 ID=cds-MCE2618188.1;Parent=gene-LVR01_02620;Dbxref=NCBI_GP:MCE2618188.1;Name=MCE2618188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942930.1;locus_tag=LVR01_02620;product=GNAT family N-acetyltransferase;protein_id=MCE2618188.1;transl_table=11 JAJSBG010000005.1 Genbank gene 27230 27832 . - . ID=gene-LVR01_02625;Name=LVR01_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02625 JAJSBG010000005.1 Protein Homology CDS 27230 27832 . - 0 ID=cds-MCE2618189.1;Parent=gene-LVR01_02625;Dbxref=NCBI_GP:MCE2618189.1;Name=MCE2618189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969311.1;locus_tag=LVR01_02625;product=threonylcarbamoyl-AMP synthase;protein_id=MCE2618189.1;transl_table=11 JAJSBG010000005.1 Genbank gene 27816 28652 . - . ID=gene-LVR01_02630;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LVR01_02630 JAJSBG010000005.1 Protein Homology CDS 27816 28652 . - 0 ID=cds-MCE2618190.1;Parent=gene-LVR01_02630;Dbxref=NCBI_GP:MCE2618190.1;Name=MCE2618190.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000761890.1;locus_tag=LVR01_02630;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=MCE2618190.1;transl_table=11 JAJSBG010000005.1 Genbank gene 28652 29731 . - . ID=gene-LVR01_02635;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LVR01_02635 JAJSBG010000005.1 Protein Homology CDS 28652 29731 . - 0 ID=cds-MCE2618191.1;Parent=gene-LVR01_02635;Dbxref=NCBI_GP:MCE2618191.1;Name=MCE2618191.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262255.1;locus_tag=LVR01_02635;product=peptide chain release factor 1;protein_id=MCE2618191.1;transl_table=11 JAJSBG010000005.1 Genbank gene 29728 30318 . - . ID=gene-LVR01_02640;Name=LVR01_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02640 JAJSBG010000005.1 Protein Homology CDS 29728 30318 . - 0 ID=cds-MCE2618192.1;Parent=gene-LVR01_02640;Dbxref=NCBI_GP:MCE2618192.1;Name=MCE2618192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068157.1;locus_tag=LVR01_02640;product=thymidine kinase;protein_id=MCE2618192.1;transl_table=11 JAJSBG010000005.1 Genbank gene 30442 30624 . + . ID=gene-LVR01_02645;Name=LVR01_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02645 JAJSBG010000005.1 Protein Homology CDS 30442 30624 . + 0 ID=cds-MCE2618193.1;Parent=gene-LVR01_02645;Dbxref=NCBI_GP:MCE2618193.1;Name=MCE2618193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589823.1;locus_tag=LVR01_02645;product=4-oxalocrotonate tautomerase;protein_id=MCE2618193.1;transl_table=11 JAJSBG010000005.1 Genbank gene 30762 32135 . + . ID=gene-LVR01_02650;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LVR01_02650 JAJSBG010000005.1 Protein Homology CDS 30762 32135 . + 0 ID=cds-MCE2618194.1;Parent=gene-LVR01_02650;Dbxref=NCBI_GP:MCE2618194.1;Name=MCE2618194.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906470.1;locus_tag=LVR01_02650;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MCE2618194.1;transl_table=11 JAJSBG010000005.1 Genbank gene 32182 33117 . - . ID=gene-LVR01_02655;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LVR01_02655 JAJSBG010000005.1 Protein Homology CDS 32182 33117 . - 0 ID=cds-MCE2618195.1;Parent=gene-LVR01_02655;Dbxref=NCBI_GP:MCE2618195.1;Name=MCE2618195.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935444.1;locus_tag=LVR01_02655;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=MCE2618195.1;transl_table=11 JAJSBG010000005.1 Genbank gene 33173 34249 . - . ID=gene-LVR01_02660;Name=LVR01_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02660 JAJSBG010000005.1 Protein Homology CDS 33173 34249 . - 0 ID=cds-MCE2618196.1;Parent=gene-LVR01_02660;Dbxref=NCBI_GP:MCE2618196.1;Name=MCE2618196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=LVR01_02660;product=aspartate-semialdehyde dehydrogenase;protein_id=MCE2618196.1;transl_table=11 JAJSBG010000005.1 Genbank gene 34592 34664 . - . ID=gene-LVR01_02665;Name=LVR01_02665;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_02665 JAJSBG010000005.1 tRNAscan-SE tRNA 34592 34664 . - . ID=rna-LVR01_02665;Parent=gene-LVR01_02665;anticodon=(pos:complement(34629..34631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02665;product=tRNA-Thr JAJSBG010000005.1 tRNAscan-SE exon 34592 34664 . - . ID=exon-LVR01_02665-1;Parent=rna-LVR01_02665;anticodon=(pos:complement(34629..34631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_02665;product=tRNA-Thr JAJSBG010000005.1 Genbank gene 34764 35273 . - . ID=gene-LVR01_02670;Name=LVR01_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02670 JAJSBG010000005.1 Protein Homology CDS 34764 35273 . - 0 ID=cds-MCE2618197.1;Parent=gene-LVR01_02670;Dbxref=NCBI_GP:MCE2618197.1;Name=MCE2618197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262434.1;locus_tag=LVR01_02670;product=QueT transporter family protein;protein_id=MCE2618197.1;transl_table=11 JAJSBG010000005.1 cmsearch riboswitch 35271 35367 . - . ID=id-JAJSBG010000005.1:35271..35367;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000005.1 Genbank gene 35396 35827 . + . ID=gene-LVR01_02675;Name=LVR01_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02675 JAJSBG010000005.1 Protein Homology CDS 35396 35827 . + 0 ID=cds-MCE2618198.1;Parent=gene-LVR01_02675;Dbxref=NCBI_GP:MCE2618198.1;Name=MCE2618198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743000.1;locus_tag=LVR01_02675;product=GtrA family protein;protein_id=MCE2618198.1;transl_table=11 JAJSBG010000005.1 Genbank gene 35909 36286 . + . ID=gene-LVR01_02680;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LVR01_02680 JAJSBG010000005.1 Protein Homology CDS 35909 36286 . + 0 ID=cds-MCE2618199.1;Parent=gene-LVR01_02680;Dbxref=NCBI_GP:MCE2618199.1;Name=MCE2618199.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855364.1;locus_tag=LVR01_02680;product=large conductance mechanosensitive channel protein MscL;protein_id=MCE2618199.1;transl_table=11 JAJSBG010000005.1 Genbank gene 36332 37426 . - . ID=gene-LVR01_02685;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LVR01_02685 JAJSBG010000005.1 Protein Homology CDS 36332 37426 . - 0 ID=cds-MCE2618200.1;Parent=gene-LVR01_02685;Dbxref=NCBI_GP:MCE2618200.1;Name=MCE2618200.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254302.1;locus_tag=LVR01_02685;product=ferrochelatase;protein_id=MCE2618200.1;transl_table=11 JAJSBG010000005.1 Genbank gene 37580 38803 . + . ID=gene-LVR01_02690;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LVR01_02690 JAJSBG010000005.1 Protein Homology CDS 37580 38803 . + 0 ID=cds-MCE2618201.1;Parent=gene-LVR01_02690;Dbxref=NCBI_GP:MCE2618201.1;Name=MCE2618201.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222047.1;locus_tag=LVR01_02690;product=peptidase T;protein_id=MCE2618201.1;transl_table=11 JAJSBG010000005.1 Genbank gene 38857 39468 . - . ID=gene-LVR01_02695;Name=LVR01_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02695 JAJSBG010000005.1 Protein Homology CDS 38857 39468 . - 0 ID=cds-MCE2618202.1;Parent=gene-LVR01_02695;Dbxref=NCBI_GP:MCE2618202.1;Name=MCE2618202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030436.1;locus_tag=LVR01_02695;product=hypothetical protein;protein_id=MCE2618202.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 39944 41359 . - . ID=gene-LVR01_02700;Name=LVR01_02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02700;pseudo=true JAJSBG010000005.1 Protein Homology CDS 39944 41359 . - 0 ID=cds-LVR01_02700;Parent=gene-LVR01_02700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672589.1;locus_tag=LVR01_02700;product=pneumococcal-type histidine triad protein;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 41679 44768 . - . ID=gene-LVR01_02705;Name=LVR01_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02705 JAJSBG010000005.1 Protein Homology CDS 41679 44768 . - 0 ID=cds-MCE2618203.1;Parent=gene-LVR01_02705;Dbxref=NCBI_GP:MCE2618203.1;Name=MCE2618203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700358.1;locus_tag=LVR01_02705;product=pneumococcal-type histidine triad protein;protein_id=MCE2618203.1;transl_table=11 JAJSBG010000005.1 Genbank gene 44776 45693 . - . ID=gene-LVR01_02710;Name=adcAII;gbkey=Gene;gene=adcAII;gene_biotype=protein_coding;locus_tag=LVR01_02710 JAJSBG010000005.1 Protein Homology CDS 44776 45693 . - 0 ID=cds-MCE2618204.1;Parent=gene-LVR01_02710;Dbxref=NCBI_GP:MCE2618204.1;Name=MCE2618204.1;gbkey=CDS;gene=adcAII;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744528.1;locus_tag=LVR01_02710;product=zinc-binding lipoprotein AdcAII;protein_id=MCE2618204.1;transl_table=11 JAJSBG010000005.1 Genbank gene 45836 47227 . - . ID=gene-LVR01_02715;Name=LVR01_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02715 JAJSBG010000005.1 Protein Homology CDS 45836 47227 . - 0 ID=cds-MCE2618205.1;Parent=gene-LVR01_02715;Dbxref=NCBI_GP:MCE2618205.1;Name=MCE2618205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020339.1;locus_tag=LVR01_02715;product=amino acid permease;protein_id=MCE2618205.1;transl_table=11 JAJSBG010000005.1 Genbank gene 47350 47907 . - . ID=gene-LVR01_02720;Name=sdbB;gbkey=Gene;gene=sdbB;gene_biotype=protein_coding;locus_tag=LVR01_02720 JAJSBG010000005.1 Protein Homology CDS 47350 47907 . - 0 ID=cds-MCE2618206.1;Parent=gene-LVR01_02720;Dbxref=NCBI_GP:MCE2618206.1;Name=MCE2618206.1;gbkey=CDS;gene=sdbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757364.1;locus_tag=LVR01_02720;product=thiol-disulfide oxidoreductase-associated lipoprotein SdbB;protein_id=MCE2618206.1;transl_table=11 JAJSBG010000005.1 Genbank gene 47919 48626 . - . ID=gene-LVR01_02725;Name=ccdA2;gbkey=Gene;gene=ccdA2;gene_biotype=protein_coding;locus_tag=LVR01_02725 JAJSBG010000005.1 Protein Homology CDS 47919 48626 . - 0 ID=cds-MCE2618207.1;Parent=gene-LVR01_02725;Dbxref=NCBI_GP:MCE2618207.1;Name=MCE2618207.1;gbkey=CDS;gene=ccdA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237834.1;locus_tag=LVR01_02725;product=thiol-disulfide oxidoreductase-associated membrane protein CcdA2;protein_id=MCE2618207.1;transl_table=11 JAJSBG010000005.1 Genbank gene 48856 49272 . - . ID=gene-LVR01_02730;Name=LVR01_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02730 JAJSBG010000005.1 Protein Homology CDS 48856 49272 . - 0 ID=cds-MCE2618208.1;Parent=gene-LVR01_02730;Dbxref=NCBI_GP:MCE2618208.1;Name=MCE2618208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642281.1;locus_tag=LVR01_02730;product=transmembrane domain-containing protein;protein_id=MCE2618208.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 49300 49497 . - . ID=gene-LVR01_02735;Name=LVR01_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02735;pseudo=true JAJSBG010000005.1 Protein Homology CDS 49300 49497 . - 0 ID=cds-LVR01_02735;Parent=gene-LVR01_02735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000226586.1;locus_tag=LVR01_02735;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 51428 51492 . - . ID=gene-LVR01_02740;Name=LVR01_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02740;pseudo=true JAJSBG010000005.1 Protein Homology CDS 51428 51492 . - 0 ID=cds-LVR01_02740;Parent=gene-LVR01_02740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=LVR01_02740;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 52087 53613 . - . ID=gene-LVR01_02745;Name=LVR01_02745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02745;pseudo=true JAJSBG010000005.1 Protein Homology CDS 52087 53613 . - 0 ID=cds-LVR01_02745;Parent=gene-LVR01_02745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021615.2;locus_tag=LVR01_02745;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 53709 54299 . - . ID=gene-LVR01_02750;Name=LVR01_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02750 JAJSBG010000005.1 Protein Homology CDS 53709 54299 . - 0 ID=cds-MCE2618209.1;Parent=gene-LVR01_02750;Dbxref=NCBI_GP:MCE2618209.1;Name=MCE2618209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399240.1;locus_tag=LVR01_02750;product=3'-5' exonuclease;protein_id=MCE2618209.1;transl_table=11 JAJSBG010000005.1 Genbank gene 54397 54888 . - . ID=gene-LVR01_02755;Name=rocS;gbkey=Gene;gene=rocS;gene_biotype=protein_coding;locus_tag=LVR01_02755 JAJSBG010000005.1 Protein Homology CDS 54397 54888 . - 0 ID=cds-MCE2618210.1;Parent=gene-LVR01_02755;Dbxref=NCBI_GP:MCE2618210.1;Name=MCE2618210.1;gbkey=CDS;gene=rocS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021242.1;locus_tag=LVR01_02755;product=chromosome segregation protein RocS;protein_id=MCE2618210.1;transl_table=11 JAJSBG010000005.1 Genbank gene 54965 55657 . - . ID=gene-LVR01_02760;Name=LVR01_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02760 JAJSBG010000005.1 Protein Homology CDS 54965 55657 . - 0 ID=cds-MCE2618211.1;Parent=gene-LVR01_02760;Dbxref=NCBI_GP:MCE2618211.1;Name=MCE2618211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261401.1;locus_tag=LVR01_02760;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MCE2618211.1;transl_table=11 JAJSBG010000005.1 Genbank gene 55674 55988 . - . ID=gene-LVR01_02765;Name=macP;gbkey=Gene;gene=macP;gene_biotype=protein_coding;locus_tag=LVR01_02765 JAJSBG010000005.1 Protein Homology CDS 55674 55988 . - 0 ID=cds-MCE2618212.1;Parent=gene-LVR01_02765;Dbxref=NCBI_GP:MCE2618212.1;Name=MCE2618212.1;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517865.1;locus_tag=LVR01_02765;product=cell wall synthase accessory phosphoprotein MacP;protein_id=MCE2618212.1;transl_table=11 JAJSBG010000005.1 Genbank gene 56000 56545 . - . ID=gene-LVR01_02770;Name=LVR01_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02770 JAJSBG010000005.1 Protein Homology CDS 56000 56545 . - 0 ID=cds-MCE2618213.1;Parent=gene-LVR01_02770;Dbxref=NCBI_GP:MCE2618213.1;Name=MCE2618213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000393791.1;locus_tag=LVR01_02770;product=NUDIX hydrolase;protein_id=MCE2618213.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 56555 57888 . - . ID=gene-LVR01_02775;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=pseudogene;locus_tag=LVR01_02775;pseudo=true JAJSBG010000005.1 Protein Homology CDS 56555 57888 . - 0 ID=cds-LVR01_02775;Parent=gene-LVR01_02775;Note=frameshifted;gbkey=CDS;gene=glmU;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=LVR01_02775;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 58078 58878 . + . ID=gene-LVR01_02780;Name=LVR01_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02780 JAJSBG010000005.1 Protein Homology CDS 58078 58878 . + 0 ID=cds-MCE2618214.1;Parent=gene-LVR01_02780;Dbxref=NCBI_GP:MCE2618214.1;Name=MCE2618214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866725.1;locus_tag=LVR01_02780;product=glycoside hydrolase family 25 protein;protein_id=MCE2618214.1;transl_table=11 JAJSBG010000005.1 Genbank gene 58973 59815 . + . ID=gene-LVR01_02785;Name=LVR01_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02785 JAJSBG010000005.1 Protein Homology CDS 58973 59815 . + 0 ID=cds-MCE2618215.1;Parent=gene-LVR01_02785;Dbxref=NCBI_GP:MCE2618215.1;Name=MCE2618215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256605.1;locus_tag=LVR01_02785;product=DUF368 domain-containing protein;protein_id=MCE2618215.1;transl_table=11 JAJSBG010000005.1 Genbank gene 59815 60297 . + . ID=gene-LVR01_02790;Name=LVR01_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02790 JAJSBG010000005.1 Protein Homology CDS 59815 60297 . + 0 ID=cds-MCE2618216.1;Parent=gene-LVR01_02790;Dbxref=NCBI_GP:MCE2618216.1;Name=MCE2618216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397917.1;locus_tag=LVR01_02790;product=aminoacyl-tRNA deacylase;protein_id=MCE2618216.1;transl_table=11 JAJSBG010000005.1 Genbank gene 60297 60917 . + . ID=gene-LVR01_02795;Name=LVR01_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02795 JAJSBG010000005.1 Protein Homology CDS 60297 60917 . + 0 ID=cds-MCE2618217.1;Parent=gene-LVR01_02795;Dbxref=NCBI_GP:MCE2618217.1;Name=MCE2618217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780815.1;locus_tag=LVR01_02795;product=histidine phosphatase family protein;protein_id=MCE2618217.1;transl_table=11 JAJSBG010000005.1 Genbank pseudogene 61261 61356 . - . ID=gene-LVR01_02800;Name=LVR01_02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02800;pseudo=true JAJSBG010000005.1 Protein Homology CDS 61261 61356 . - 0 ID=cds-LVR01_02800;Parent=gene-LVR01_02800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=LVR01_02800;product=IS630 family transposase;pseudo=true;transl_table=11 JAJSBG010000005.1 Genbank gene 61663 62604 . - . ID=gene-LVR01_02805;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=LVR01_02805 JAJSBG010000005.1 Protein Homology CDS 61663 62604 . - 0 ID=cds-MCE2618218.1;Parent=gene-LVR01_02805;Dbxref=NCBI_GP:MCE2618218.1;Name=MCE2618218.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399245.1;locus_tag=LVR01_02805;product=peptidylprolyl isomerase PrsA;protein_id=MCE2618218.1;transl_table=11 JAJSBG010000005.1 Genbank gene 62671 63384 . - . ID=gene-LVR01_02810;Name=LVR01_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02810 JAJSBG010000005.1 Protein Homology CDS 62671 63384 . - 0 ID=cds-MCE2618219.1;Parent=gene-LVR01_02810;Dbxref=NCBI_GP:MCE2618219.1;Name=MCE2618219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812425.1;locus_tag=LVR01_02810;product=O-methyltransferase;protein_id=MCE2618219.1;transl_table=11 JAJSBG010000005.1 Genbank gene 63386 65188 . - . ID=gene-LVR01_02815;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=LVR01_02815 JAJSBG010000005.1 Protein Homology CDS 63386 65188 . - 0 ID=cds-MCE2618220.1;Parent=gene-LVR01_02815;Dbxref=NCBI_GP:MCE2618220.1;Name=MCE2618220.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252660.1;locus_tag=LVR01_02815;product=oligoendopeptidase F;protein_id=MCE2618220.1;transl_table=11 JAJSBG010000005.1 Genbank gene 65207 66160 . - . ID=gene-LVR01_02820;Name=LVR01_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02820 JAJSBG010000005.1 Protein Homology CDS 65207 66160 . - 0 ID=cds-MCE2618221.1;Parent=gene-LVR01_02820;Dbxref=NCBI_GP:MCE2618221.1;Name=MCE2618221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495911.1;locus_tag=LVR01_02820;product=competence protein CoiA;protein_id=MCE2618221.1;transl_table=11 JAJSBG010000005.1 Genbank gene 66272 67093 . - . ID=gene-LVR01_02825;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=LVR01_02825 JAJSBG010000005.1 Protein Homology CDS 66272 67093 . - 0 ID=cds-MCE2618222.1;Parent=gene-LVR01_02825;Dbxref=NCBI_GP:MCE2618222.1;Name=MCE2618222.1;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413836.1;locus_tag=LVR01_02825;product=SAM-dependent methyltransferase TehB;protein_id=MCE2618222.1;transl_table=11 JAJSBG010000005.1 Genbank gene 67109 67576 . - . ID=gene-LVR01_02830;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LVR01_02830 JAJSBG010000005.1 Protein Homology CDS 67109 67576 . - 0 ID=cds-MCE2618223.1;Parent=gene-LVR01_02830;Dbxref=NCBI_GP:MCE2618223.1;Name=MCE2618223.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894882.1;locus_tag=LVR01_02830;product=SsrA-binding protein SmpB;protein_id=MCE2618223.1;transl_table=11 JAJSBG010000005.1 Genbank gene 67539 69893 . - . ID=gene-LVR01_02835;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LVR01_02835 JAJSBG010000005.1 Protein Homology CDS 67539 69893 . - 0 ID=cds-MCE2618224.1;Parent=gene-LVR01_02835;Dbxref=NCBI_GP:MCE2618224.1;Name=MCE2618224.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653285.1;locus_tag=LVR01_02835;product=ribonuclease R;protein_id=MCE2618224.1;transl_table=11 JAJSBG010000005.1 Genbank gene 70155 70388 . - . ID=gene-LVR01_02840;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LVR01_02840 JAJSBG010000005.1 Protein Homology CDS 70155 70388 . - 0 ID=cds-MCE2618225.1;Parent=gene-LVR01_02840;Dbxref=NCBI_GP:MCE2618225.1;Name=MCE2618225.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000186.1;locus_tag=LVR01_02840;product=preprotein translocase subunit SecG;protein_id=MCE2618225.1;transl_table=11 JAJSBG010000005.1 Genbank gene 70428 70577 . - . ID=gene-LVR01_02845;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LVR01_02845 JAJSBG010000005.1 Protein Homology CDS 70428 70577 . - 0 ID=cds-MCE2618226.1;Parent=gene-LVR01_02845;Dbxref=NCBI_GP:MCE2618226.1;Name=MCE2618226.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809064.1;locus_tag=LVR01_02845;product=50S ribosomal protein L33;protein_id=MCE2618226.1;transl_table=11 JAJSBG010000005.1 Genbank gene 70614 70720 . - . ID=gene-LVR01_02850;Name=LVR01_02850;end_range=70720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02850;partial=true JAJSBG010000005.1 Protein Homology CDS 70614 70720 . - 2 ID=cds-MCE2618227.1;Parent=gene-LVR01_02850;Dbxref=NCBI_GP:MCE2618227.1;Name=MCE2618227.1;end_range=70720,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_02850;partial=true;product=IS5/IS1182 family transposase;protein_id=MCE2618227.1;transl_table=11 ##sequence-region JAJSBG010000060.1 1 7456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000060.1 Genbank region 1 7456 . + . ID=JAJSBG010000060.1:1..7456;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000060.1 Genbank pseudogene 55 240 . + . ID=gene-LVR01_10605;Name=LVR01_10605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10605;pseudo=true JAJSBG010000060.1 Protein Homology CDS 55 240 . + 0 ID=cds-LVR01_10605;Parent=gene-LVR01_10605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_10605;product=transposase;pseudo=true;transl_table=11 JAJSBG010000060.1 Genbank gene 224 406 . - . ID=gene-LVR01_10610;Name=LVR01_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10610 JAJSBG010000060.1 Protein Homology CDS 224 406 . - 0 ID=cds-MCE2619626.1;Parent=gene-LVR01_10610;Dbxref=NCBI_GP:MCE2619626.1;Name=MCE2619626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855484.1;locus_tag=LVR01_10610;product=hypothetical protein;protein_id=MCE2619626.1;transl_table=11 JAJSBG010000060.1 Genbank gene 536 2515 . + . ID=gene-LVR01_10615;Name=LVR01_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10615 JAJSBG010000060.1 Protein Homology CDS 536 2515 . + 0 ID=cds-MCE2619627.1;Parent=gene-LVR01_10615;Dbxref=NCBI_GP:MCE2619627.1;Name=MCE2619627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742236.1;locus_tag=LVR01_10615;product=peptide ABC transporter substrate-binding protein;protein_id=MCE2619627.1;transl_table=11 JAJSBG010000060.1 Genbank gene 2582 4078 . + . ID=gene-LVR01_10620;Name=LVR01_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10620 JAJSBG010000060.1 Protein Homology CDS 2582 4078 . + 0 ID=cds-MCE2619628.1;Parent=gene-LVR01_10620;Dbxref=NCBI_GP:MCE2619628.1;Name=MCE2619628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759888.1;locus_tag=LVR01_10620;product=ABC transporter permease;protein_id=MCE2619628.1;transl_table=11 JAJSBG010000060.1 Genbank gene 4078 5004 . + . ID=gene-LVR01_10625;Name=LVR01_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10625 JAJSBG010000060.1 Protein Homology CDS 4078 5004 . + 0 ID=cds-MCE2619629.1;Parent=gene-LVR01_10625;Dbxref=NCBI_GP:MCE2619629.1;Name=MCE2619629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730677.1;locus_tag=LVR01_10625;product=ABC transporter permease;protein_id=MCE2619629.1;transl_table=11 JAJSBG010000060.1 Genbank gene 5013 6080 . + . ID=gene-LVR01_10630;Name=LVR01_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10630 JAJSBG010000060.1 Protein Homology CDS 5013 6080 . + 0 ID=cds-MCE2619630.1;Parent=gene-LVR01_10630;Dbxref=NCBI_GP:MCE2619630.1;Name=MCE2619630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866499.1;locus_tag=LVR01_10630;product=ABC transporter ATP-binding protein;protein_id=MCE2619630.1;transl_table=11 JAJSBG010000060.1 Genbank gene 6091 7017 . + . ID=gene-LVR01_10635;Name=LVR01_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10635 JAJSBG010000060.1 Protein Homology CDS 6091 7017 . + 0 ID=cds-MCE2619631.1;Parent=gene-LVR01_10635;Dbxref=NCBI_GP:MCE2619631.1;Name=MCE2619631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291287.1;locus_tag=LVR01_10635;product=ATP-binding cassette domain-containing protein;protein_id=MCE2619631.1;transl_table=11 JAJSBG010000060.1 Genbank gene 7083 7456 . - . ID=gene-LVR01_10640;Name=LVR01_10640;end_range=7456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10640;partial=true JAJSBG010000060.1 Protein Homology CDS 7083 7456 . - 2 ID=cds-MCE2619632.1;Parent=gene-LVR01_10640;Dbxref=NCBI_GP:MCE2619632.1;Name=MCE2619632.1;end_range=7456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632353.1;locus_tag=LVR01_10640;partial=true;product=transposase;protein_id=MCE2619632.1;transl_table=11 ##sequence-region JAJSBG010000061.1 1 6689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000061.1 Genbank region 1 6689 . + . ID=JAJSBG010000061.1:1..6689;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000061.1 Genbank gene 233 415 . + . ID=gene-LVR01_10645;Name=LVR01_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10645 JAJSBG010000061.1 Protein Homology CDS 233 415 . + 0 ID=cds-MCE2619633.1;Parent=gene-LVR01_10645;Dbxref=NCBI_GP:MCE2619633.1;Name=MCE2619633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435077.1;locus_tag=LVR01_10645;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=MCE2619633.1;transl_table=11 JAJSBG010000061.1 Genbank gene 656 856 . + . ID=gene-LVR01_10650;Name=LVR01_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10650 JAJSBG010000061.1 Protein Homology CDS 656 856 . + 0 ID=cds-MCE2619634.1;Parent=gene-LVR01_10650;Dbxref=NCBI_GP:MCE2619634.1;Name=MCE2619634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055966.1;locus_tag=LVR01_10650;product=SPPN_00645 family bacteriocin-like peptide;protein_id=MCE2619634.1;transl_table=11 JAJSBG010000061.1 Genbank gene 1049 1279 . + . ID=gene-LVR01_10655;Name=blpU;gbkey=Gene;gene=blpU;gene_biotype=protein_coding;locus_tag=LVR01_10655 JAJSBG010000061.1 Protein Homology CDS 1049 1279 . + 0 ID=cds-MCE2619635.1;Parent=gene-LVR01_10655;Dbxref=NCBI_GP:MCE2619635.1;Name=MCE2619635.1;gbkey=CDS;gene=blpU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093487.1;locus_tag=LVR01_10655;product=bacteriocin-like peptide BlpU;protein_id=MCE2619635.1;transl_table=11 JAJSBG010000061.1 Genbank gene 2014 2601 . + . ID=gene-LVR01_10660;Name=LVR01_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10660 JAJSBG010000061.1 Protein Homology CDS 2014 2601 . + 0 ID=cds-MCE2619636.1;Parent=gene-LVR01_10660;Dbxref=NCBI_GP:MCE2619636.1;Name=MCE2619636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268846.1;locus_tag=LVR01_10660;product=recombinase family protein;protein_id=MCE2619636.1;transl_table=11 JAJSBG010000061.1 Genbank gene 2800 3975 . + . ID=gene-LVR01_10665;Name=LVR01_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10665 JAJSBG010000061.1 Protein Homology CDS 2800 3975 . + 0 ID=cds-MCE2619637.1;Parent=gene-LVR01_10665;Dbxref=NCBI_GP:MCE2619637.1;Name=MCE2619637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379811.1;locus_tag=LVR01_10665;product=CAP domain-containing protein;protein_id=MCE2619637.1;transl_table=11 JAJSBG010000061.1 Genbank gene 4022 4486 . + . ID=gene-LVR01_10670;Name=LVR01_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10670 JAJSBG010000061.1 GeneMarkS-2+ CDS 4022 4486 . + 0 ID=cds-MCE2619638.1;Parent=gene-LVR01_10670;Dbxref=NCBI_GP:MCE2619638.1;Name=MCE2619638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10670;product=hypothetical protein;protein_id=MCE2619638.1;transl_table=11 JAJSBG010000061.1 Genbank gene 4525 5361 . + . ID=gene-LVR01_10675;Name=LVR01_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10675 JAJSBG010000061.1 Protein Homology CDS 4525 5361 . + 0 ID=cds-MCE2619639.1;Parent=gene-LVR01_10675;Dbxref=NCBI_GP:MCE2619639.1;Name=MCE2619639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012972533.1;locus_tag=LVR01_10675;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2619639.1;transl_table=11 JAJSBG010000061.1 Genbank gene 5391 6437 . + . ID=gene-LVR01_10680;Name=LVR01_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10680 JAJSBG010000061.1 Protein Homology CDS 5391 6437 . + 0 ID=cds-MCE2619640.1;Parent=gene-LVR01_10680;Dbxref=NCBI_GP:MCE2619640.1;Name=MCE2619640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732623.1;locus_tag=LVR01_10680;product=DUF6287 domain-containing protein;protein_id=MCE2619640.1;transl_table=11 ##sequence-region JAJSBG010000062.1 1 6506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000062.1 Genbank region 1 6506 . + . ID=JAJSBG010000062.1:1..6506;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000062.1 Genbank gene 151 399 . + . ID=gene-LVR01_10685;Name=LVR01_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10685 JAJSBG010000062.1 Protein Homology CDS 151 399 . + 0 ID=cds-MCE2619641.1;Parent=gene-LVR01_10685;Dbxref=NCBI_GP:MCE2619641.1;Name=MCE2619641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364981.1;locus_tag=LVR01_10685;product=YneF family protein;protein_id=MCE2619641.1;transl_table=11 JAJSBG010000062.1 Genbank gene 603 1397 . + . ID=gene-LVR01_10690;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=LVR01_10690 JAJSBG010000062.1 Protein Homology CDS 603 1397 . + 0 ID=cds-MCE2619642.1;Parent=gene-LVR01_10690;Dbxref=NCBI_GP:MCE2619642.1;Name=MCE2619642.1;gbkey=CDS;gene=racE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370386.1;locus_tag=LVR01_10690;product=glutamate racemase;protein_id=MCE2619642.1;transl_table=11 JAJSBG010000062.1 Genbank pseudogene 1394 2366 . + . ID=gene-LVR01_10695;Name=LVR01_10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10695;pseudo=true JAJSBG010000062.1 Protein Homology CDS 1394 2366 . + 0 ID=cds-LVR01_10695;Parent=gene-LVR01_10695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182414.1;locus_tag=LVR01_10695;product=nucleoside-triphosphate diphosphatase;pseudo=true;transl_table=11 JAJSBG010000062.1 Genbank gene 2342 2863 . + . ID=gene-LVR01_10700;Name=LVR01_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10700 JAJSBG010000062.1 Protein Homology CDS 2342 2863 . + 0 ID=cds-MCE2619643.1;Parent=gene-LVR01_10700;Dbxref=NCBI_GP:MCE2619643.1;Name=MCE2619643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118598.1;locus_tag=LVR01_10700;product=metallophosphoesterase;protein_id=MCE2619643.1;transl_table=11 JAJSBG010000062.1 Genbank gene 2860 3321 . + . ID=gene-LVR01_10705;Name=LVR01_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10705 JAJSBG010000062.1 Protein Homology CDS 2860 3321 . + 0 ID=cds-MCE2619644.1;Parent=gene-LVR01_10705;Dbxref=NCBI_GP:MCE2619644.1;Name=MCE2619644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560721.1;locus_tag=LVR01_10705;product=CBS domain-containing protein;protein_id=MCE2619644.1;transl_table=11 JAJSBG010000062.1 Genbank gene 3312 4052 . + . ID=gene-LVR01_10710;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LVR01_10710 JAJSBG010000062.1 Protein Homology CDS 3312 4052 . + 0 ID=cds-MCE2619645.1;Parent=gene-LVR01_10710;Dbxref=NCBI_GP:MCE2619645.1;Name=MCE2619645.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245562.1;locus_tag=LVR01_10710;product=site-specific tyrosine recombinase XerD;protein_id=MCE2619645.1;transl_table=11 JAJSBG010000062.1 Genbank gene 4052 4780 . + . ID=gene-LVR01_10715;Name=LVR01_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10715 JAJSBG010000062.1 Protein Homology CDS 4052 4780 . + 0 ID=cds-MCE2619646.1;Parent=gene-LVR01_10715;Dbxref=NCBI_GP:MCE2619646.1;Name=MCE2619646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351912.1;locus_tag=LVR01_10715;product=segregation/condensation protein A;protein_id=MCE2619646.1;transl_table=11 JAJSBG010000062.1 Genbank gene 4799 5368 . + . ID=gene-LVR01_10720;Name=LVR01_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10720 JAJSBG010000062.1 Protein Homology CDS 4799 5368 . + 0 ID=cds-MCE2619647.1;Parent=gene-LVR01_10720;Dbxref=NCBI_GP:MCE2619647.1;Name=MCE2619647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105309.1;locus_tag=LVR01_10720;product=segregation/condensation protein B;protein_id=MCE2619647.1;transl_table=11 JAJSBG010000062.1 Genbank gene 5355 6077 . + . ID=gene-LVR01_10725;Name=LVR01_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10725 JAJSBG010000062.1 Protein Homology CDS 5355 6077 . + 0 ID=cds-MCE2619648.1;Parent=gene-LVR01_10725;Dbxref=NCBI_GP:MCE2619648.1;Name=MCE2619648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006150169.1;locus_tag=LVR01_10725;product=rRNA pseudouridine synthase;protein_id=MCE2619648.1;transl_table=11 JAJSBG010000062.1 Genbank gene 6077 6319 . + . ID=gene-LVR01_10730;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LVR01_10730 JAJSBG010000062.1 Protein Homology CDS 6077 6319 . + 0 ID=cds-MCE2619649.1;Parent=gene-LVR01_10730;Dbxref=NCBI_GP:MCE2619649.1;Name=MCE2619649.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255918.1;locus_tag=LVR01_10730;product=membrane protein insertion efficiency factor YidD;protein_id=MCE2619649.1;transl_table=11 ##sequence-region JAJSBG010000063.1 1 6486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000063.1 Genbank region 1 6486 . + . ID=JAJSBG010000063.1:1..6486;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000063.1 cmsearch riboswitch 101 203 . + . ID=id-JAJSBG010000063.1:101..203;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000063.1 Genbank gene 273 563 . + . ID=gene-LVR01_10735;Name=LVR01_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10735 JAJSBG010000063.1 Protein Homology CDS 273 563 . + 0 ID=cds-MCE2619650.1;Parent=gene-LVR01_10735;Dbxref=NCBI_GP:MCE2619650.1;Name=MCE2619650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647657.1;locus_tag=LVR01_10735;product=thiamine-binding protein;protein_id=MCE2619650.1;transl_table=11 JAJSBG010000063.1 Genbank gene 526 1284 . + . ID=gene-LVR01_10740;Name=LVR01_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10740 JAJSBG010000063.1 Protein Homology CDS 526 1284 . + 0 ID=cds-MCE2619651.1;Parent=gene-LVR01_10740;Dbxref=NCBI_GP:MCE2619651.1;Name=MCE2619651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013602.1;locus_tag=LVR01_10740;product=ABC transporter permease;protein_id=MCE2619651.1;transl_table=11 JAJSBG010000063.1 Genbank gene 1322 2329 . + . ID=gene-LVR01_10745;Name=LVR01_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10745 JAJSBG010000063.1 Protein Homology CDS 1322 2329 . + 0 ID=cds-MCE2619652.1;Parent=gene-LVR01_10745;Dbxref=NCBI_GP:MCE2619652.1;Name=MCE2619652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466586.1;locus_tag=LVR01_10745;product=ABC transporter substrate-binding protein;protein_id=MCE2619652.1;transl_table=11 JAJSBG010000063.1 Genbank gene 2329 3054 . + . ID=gene-LVR01_10750;Name=LVR01_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10750 JAJSBG010000063.1 Protein Homology CDS 2329 3054 . + 0 ID=cds-MCE2619653.1;Parent=gene-LVR01_10750;Dbxref=NCBI_GP:MCE2619653.1;Name=MCE2619653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136226.1;locus_tag=LVR01_10750;product=ABC transporter ATP-binding protein;protein_id=MCE2619653.1;transl_table=11 JAJSBG010000063.1 Genbank gene 3177 3635 . + . ID=gene-LVR01_10755;Name=LVR01_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10755 JAJSBG010000063.1 Protein Homology CDS 3177 3635 . + 0 ID=cds-MCE2619654.1;Parent=gene-LVR01_10755;Dbxref=NCBI_GP:MCE2619654.1;Name=MCE2619654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211265.1;locus_tag=LVR01_10755;product=CtsR family transcriptional regulator;protein_id=MCE2619654.1;transl_table=11 JAJSBG010000063.1 Genbank gene 3637 6069 . + . ID=gene-LVR01_10760;Name=LVR01_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10760 JAJSBG010000063.1 Protein Homology CDS 3637 6069 . + 0 ID=cds-MCE2619655.1;Parent=gene-LVR01_10760;Dbxref=NCBI_GP:MCE2619655.1;Name=MCE2619655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109706.1;locus_tag=LVR01_10760;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCE2619655.1;transl_table=11 JAJSBG010000063.1 Genbank pseudogene 6147 6486 . - . ID=gene-LVR01_10765;Name=LVR01_10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10765;pseudo=true JAJSBG010000063.1 Protein Homology CDS 6147 6486 . - 2 ID=cds-LVR01_10765;Parent=gene-LVR01_10765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_10765;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000064.1 1 6008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000064.1 Genbank region 1 6008 . + . ID=JAJSBG010000064.1:1..6008;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000064.1 Genbank gene 282 2099 . - . ID=gene-LVR01_10770;Name=LVR01_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10770 JAJSBG010000064.1 Protein Homology CDS 282 2099 . - 0 ID=cds-MCE2619656.1;Parent=gene-LVR01_10770;Dbxref=NCBI_GP:MCE2619656.1;Name=MCE2619656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220923.1;locus_tag=LVR01_10770;product=acetyltransferase;protein_id=MCE2619656.1;transl_table=11 JAJSBG010000064.1 Genbank gene 2200 3342 . - . ID=gene-LVR01_10775;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LVR01_10775 JAJSBG010000064.1 Protein Homology CDS 2200 3342 . - 0 ID=cds-MCE2619657.1;Parent=gene-LVR01_10775;Dbxref=NCBI_GP:MCE2619657.1;Name=MCE2619657.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298827.1;locus_tag=LVR01_10775;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=MCE2619657.1;transl_table=11 JAJSBG010000064.1 Genbank gene 3459 4316 . + . ID=gene-LVR01_10780;Name=LVR01_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10780 JAJSBG010000064.1 Protein Homology CDS 3459 4316 . + 0 ID=cds-MCE2619658.1;Parent=gene-LVR01_10780;Dbxref=NCBI_GP:MCE2619658.1;Name=MCE2619658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399045.1;locus_tag=LVR01_10780;product=DUF975 family protein;protein_id=MCE2619658.1;transl_table=11 JAJSBG010000064.1 Genbank gene 4342 4986 . - . ID=gene-LVR01_10785;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=LVR01_10785 JAJSBG010000064.1 Protein Homology CDS 4342 4986 . - 0 ID=cds-MCE2619659.1;Parent=gene-LVR01_10785;Dbxref=NCBI_GP:MCE2619659.1;Name=MCE2619659.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398107.1;locus_tag=LVR01_10785;product=pyroglutamyl-peptidase I;protein_id=MCE2619659.1;transl_table=11 JAJSBG010000064.1 Genbank gene 5098 5460 . - . ID=gene-LVR01_10790;Name=LVR01_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10790 JAJSBG010000064.1 Protein Homology CDS 5098 5460 . - 0 ID=cds-MCE2619660.1;Parent=gene-LVR01_10790;Dbxref=NCBI_GP:MCE2619660.1;Name=MCE2619660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022891.1;locus_tag=LVR01_10790;product=DUF1304 domain-containing protein;protein_id=MCE2619660.1;transl_table=11 JAJSBG010000064.1 Genbank gene 5471 5896 . - . ID=gene-LVR01_10795;Name=LVR01_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10795 JAJSBG010000064.1 Protein Homology CDS 5471 5896 . - 0 ID=cds-MCE2619661.1;Parent=gene-LVR01_10795;Dbxref=NCBI_GP:MCE2619661.1;Name=MCE2619661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890080.1;locus_tag=LVR01_10795;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=MCE2619661.1;transl_table=11 ##sequence-region JAJSBG010000065.1 1 6000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000065.1 Genbank region 1 6000 . + . ID=JAJSBG010000065.1:1..6000;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000065.1 Genbank gene 1 5707 . - . ID=gene-LVR01_10800;Name=LVR01_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10800;partial=true;start_range=.,1 JAJSBG010000065.1 Protein Homology CDS 1 5707 . - 0 ID=cds-MCE2619662.1;Parent=gene-LVR01_10800;Dbxref=NCBI_GP:MCE2619662.1;Name=MCE2619662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020018.2;locus_tag=LVR01_10800;partial=true;product=YPDG domain-containing protein;protein_id=MCE2619662.1;start_range=.,1;transl_table=11 ##sequence-region JAJSBG010000066.1 1 5901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000066.1 Genbank region 1 5901 . + . ID=JAJSBG010000066.1:1..5901;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000066.1 Genbank gene 110 1081 . - . ID=gene-LVR01_10805;Name=LVR01_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10805 JAJSBG010000066.1 Protein Homology CDS 110 1081 . - 0 ID=cds-MCE2619663.1;Parent=gene-LVR01_10805;Dbxref=NCBI_GP:MCE2619663.1;Name=MCE2619663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858258.1;locus_tag=LVR01_10805;product=siderophore ABC transporter substrate-binding protein;protein_id=MCE2619663.1;transl_table=11 JAJSBG010000066.1 Genbank gene 1177 1929 . - . ID=gene-LVR01_10810;Name=LVR01_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10810 JAJSBG010000066.1 Protein Homology CDS 1177 1929 . - 0 ID=cds-MCE2619664.1;Parent=gene-LVR01_10810;Dbxref=NCBI_GP:MCE2619664.1;Name=MCE2619664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764290.1;locus_tag=LVR01_10810;product=ATP-binding cassette domain-containing protein;protein_id=MCE2619664.1;transl_table=11 JAJSBG010000066.1 Genbank gene 1926 2882 . - . ID=gene-LVR01_10815;Name=LVR01_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10815 JAJSBG010000066.1 Protein Homology CDS 1926 2882 . - 0 ID=cds-MCE2619665.1;Parent=gene-LVR01_10815;Dbxref=NCBI_GP:MCE2619665.1;Name=MCE2619665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193667.1;locus_tag=LVR01_10815;product=iron chelate uptake ABC transporter family permease subunit;protein_id=MCE2619665.1;transl_table=11 JAJSBG010000066.1 Genbank gene 2872 3831 . - . ID=gene-LVR01_10820;Name=LVR01_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10820 JAJSBG010000066.1 Protein Homology CDS 2872 3831 . - 0 ID=cds-MCE2619666.1;Parent=gene-LVR01_10820;Dbxref=NCBI_GP:MCE2619666.1;Name=MCE2619666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777236.1;locus_tag=LVR01_10820;product=ABC transporter permease;protein_id=MCE2619666.1;transl_table=11 JAJSBG010000066.1 Genbank gene 4069 5133 . + . ID=gene-LVR01_10825;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=LVR01_10825 JAJSBG010000066.1 Protein Homology CDS 4069 5133 . + 0 ID=cds-MCE2619667.1;Parent=gene-LVR01_10825;Dbxref=NCBI_GP:MCE2619667.1;Name=MCE2619667.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519237.1;locus_tag=LVR01_10825;product=glutamyl aminopeptidase;protein_id=MCE2619667.1;transl_table=11 JAJSBG010000066.1 Genbank gene 5153 5449 . + . ID=gene-LVR01_10830;Name=LVR01_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10830 JAJSBG010000066.1 Protein Homology CDS 5153 5449 . + 0 ID=cds-MCE2619668.1;Parent=gene-LVR01_10830;Dbxref=NCBI_GP:MCE2619668.1;Name=MCE2619668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230158.1;locus_tag=LVR01_10830;product=bacteriocin immunity protein;protein_id=MCE2619668.1;transl_table=11 ##sequence-region JAJSBG010000067.1 1 5606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000067.1 Genbank region 1 5606 . + . ID=JAJSBG010000067.1:1..5606;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000067.1 Genbank gene 647 1576 . + . ID=gene-LVR01_10835;Name=LVR01_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10835 JAJSBG010000067.1 Protein Homology CDS 647 1576 . + 0 ID=cds-MCE2619669.1;Parent=gene-LVR01_10835;Dbxref=NCBI_GP:MCE2619669.1;Name=MCE2619669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714575.1;locus_tag=LVR01_10835;product=sugar ABC transporter permease;protein_id=MCE2619669.1;transl_table=11 JAJSBG010000067.1 Genbank gene 1590 2513 . + . ID=gene-LVR01_10840;Name=LVR01_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10840 JAJSBG010000067.1 Protein Homology CDS 1590 2513 . + 0 ID=cds-MCE2619670.1;Parent=gene-LVR01_10840;Dbxref=NCBI_GP:MCE2619670.1;Name=MCE2619670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075101.1;locus_tag=LVR01_10840;product=carbohydrate ABC transporter permease;protein_id=MCE2619670.1;transl_table=11 JAJSBG010000067.1 Genbank gene 2617 4092 . + . ID=gene-LVR01_10845;Name=LVR01_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10845 JAJSBG010000067.1 Protein Homology CDS 2617 4092 . + 0 ID=cds-MCE2619671.1;Parent=gene-LVR01_10845;Dbxref=NCBI_GP:MCE2619671.1;Name=MCE2619671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800432.1;locus_tag=LVR01_10845;product=ABC transporter substrate-binding protein;protein_id=MCE2619671.1;transl_table=11 JAJSBG010000067.1 Genbank gene 4517 5503 . + . ID=gene-LVR01_10850;Name=LVR01_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10850 JAJSBG010000067.1 Protein Homology CDS 4517 5503 . + 0 ID=cds-MCE2619672.1;Parent=gene-LVR01_10850;Dbxref=NCBI_GP:MCE2619672.1;Name=MCE2619672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030014.1;locus_tag=LVR01_10850;product=rhodanese-related sulfurtransferase;protein_id=MCE2619672.1;transl_table=11 ##sequence-region JAJSBG010000068.1 1 5064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000068.1 Genbank region 1 5064 . + . ID=JAJSBG010000068.1:1..5064;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000068.1 Genbank gene 176 1721 . + . ID=gene-LVR01_10855;Name=LVR01_10855;gbkey=Gene;gene_biotype=rRNA;locus_tag=LVR01_10855 JAJSBG010000068.1 cmsearch rRNA 176 1721 . + . ID=rna-LVR01_10855;Parent=gene-LVR01_10855;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10855;product=16S ribosomal RNA JAJSBG010000068.1 cmsearch exon 176 1721 . + . ID=exon-LVR01_10855-1;Parent=rna-LVR01_10855;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10855;product=16S ribosomal RNA JAJSBG010000068.1 Genbank gene 1773 1845 . + . ID=gene-LVR01_10860;Name=LVR01_10860;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_10860 JAJSBG010000068.1 tRNAscan-SE tRNA 1773 1845 . + . ID=rna-LVR01_10860;Parent=gene-LVR01_10860;anticodon=(pos:1806..1808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10860;product=tRNA-Ala JAJSBG010000068.1 tRNAscan-SE exon 1773 1845 . + . ID=exon-LVR01_10860-1;Parent=rna-LVR01_10860;anticodon=(pos:1806..1808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_10860;product=tRNA-Ala JAJSBG010000068.1 Genbank gene 1970 4871 . + . ID=gene-LVR01_10865;Name=LVR01_10865;gbkey=Gene;gene_biotype=rRNA;locus_tag=LVR01_10865 JAJSBG010000068.1 cmsearch rRNA 1970 4871 . + . ID=rna-LVR01_10865;Parent=gene-LVR01_10865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10865;product=23S ribosomal RNA JAJSBG010000068.1 cmsearch exon 1970 4871 . + . ID=exon-LVR01_10865-1;Parent=rna-LVR01_10865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10865;product=23S ribosomal RNA JAJSBG010000068.1 Genbank gene 4948 5063 . + . ID=gene-LVR01_10870;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LVR01_10870 JAJSBG010000068.1 cmsearch rRNA 4948 5063 . + . ID=rna-LVR01_10870;Parent=gene-LVR01_10870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10870;product=5S ribosomal RNA JAJSBG010000068.1 cmsearch exon 4948 5063 . + . ID=exon-LVR01_10870-1;Parent=rna-LVR01_10870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LVR01_10870;product=5S ribosomal RNA ##sequence-region JAJSBG010000069.1 1 4777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000069.1 Genbank region 1 4777 . + . ID=JAJSBG010000069.1:1..4777;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000069.1 Genbank gene 123 401 . - . ID=gene-LVR01_10875;Name=LVR01_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10875 JAJSBG010000069.1 Protein Homology CDS 123 401 . - 0 ID=cds-MCE2619673.1;Parent=gene-LVR01_10875;Dbxref=NCBI_GP:MCE2619673.1;Name=MCE2619673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134981.1;locus_tag=LVR01_10875;product=hypothetical protein;protein_id=MCE2619673.1;transl_table=11 JAJSBG010000069.1 Genbank gene 412 564 . - . ID=gene-LVR01_10880;Name=LVR01_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10880 JAJSBG010000069.1 Protein Homology CDS 412 564 . - 0 ID=cds-MCE2619674.1;Parent=gene-LVR01_10880;Dbxref=NCBI_GP:MCE2619674.1;Name=MCE2619674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036642.1;locus_tag=LVR01_10880;product=hypothetical protein;protein_id=MCE2619674.1;transl_table=11 JAJSBG010000069.1 Genbank gene 557 1090 . - . ID=gene-LVR01_10885;Name=LVR01_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10885 JAJSBG010000069.1 Protein Homology CDS 557 1090 . - 0 ID=cds-MCE2619675.1;Parent=gene-LVR01_10885;Dbxref=NCBI_GP:MCE2619675.1;Name=MCE2619675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105679.1;locus_tag=LVR01_10885;product=hypothetical protein;protein_id=MCE2619675.1;transl_table=11 JAJSBG010000069.1 Genbank gene 1087 1293 . - . ID=gene-LVR01_10890;Name=LVR01_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10890 JAJSBG010000069.1 Protein Homology CDS 1087 1293 . - 0 ID=cds-MCE2619676.1;Parent=gene-LVR01_10890;Dbxref=NCBI_GP:MCE2619676.1;Name=MCE2619676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368698.1;locus_tag=LVR01_10890;product=hypothetical protein;protein_id=MCE2619676.1;transl_table=11 JAJSBG010000069.1 Genbank gene 1286 4777 . - . ID=gene-LVR01_10895;Name=LVR01_10895;end_range=4777,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10895;partial=true JAJSBG010000069.1 Protein Homology CDS 1286 4777 . - 0 ID=cds-MCE2619677.1;Parent=gene-LVR01_10895;Dbxref=NCBI_GP:MCE2619677.1;Name=MCE2619677.1;end_range=4777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=LVR01_10895;partial=true;product=tail fiber domain-containing protein;protein_id=MCE2619677.1;transl_table=11 ##sequence-region JAJSBG010000006.1 1 70452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000006.1 Genbank region 1 70452 . + . ID=JAJSBG010000006.1:1..70452;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000006.1 Genbank gene 91 2088 . - . ID=gene-LVR01_02855;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LVR01_02855 JAJSBG010000006.1 Protein Homology CDS 91 2088 . - 0 ID=cds-MCE2618228.1;Parent=gene-LVR01_02855;Dbxref=NCBI_GP:MCE2618228.1;Name=MCE2618228.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155678.1;locus_tag=LVR01_02855;product=methionine--tRNA ligase;protein_id=MCE2618228.1;transl_table=11 JAJSBG010000006.1 Genbank gene 2212 3471 . - . ID=gene-LVR01_02860;Name=LVR01_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02860 JAJSBG010000006.1 Protein Homology CDS 2212 3471 . - 0 ID=cds-MCE2618229.1;Parent=gene-LVR01_02860;Dbxref=NCBI_GP:MCE2618229.1;Name=MCE2618229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180420.1;locus_tag=LVR01_02860;product=ABC transporter permease;protein_id=MCE2618229.1;transl_table=11 JAJSBG010000006.1 Genbank gene 3473 4174 . - . ID=gene-LVR01_02865;Name=LVR01_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02865 JAJSBG010000006.1 Protein Homology CDS 3473 4174 . - 0 ID=cds-MCE2618230.1;Parent=gene-LVR01_02865;Dbxref=NCBI_GP:MCE2618230.1;Name=MCE2618230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465646.1;locus_tag=LVR01_02865;product=ABC transporter ATP-binding protein;protein_id=MCE2618230.1;transl_table=11 JAJSBG010000006.1 Genbank gene 4158 5363 . - . ID=gene-LVR01_02870;Name=LVR01_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02870 JAJSBG010000006.1 Protein Homology CDS 4158 5363 . - 0 ID=cds-MCE2618231.1;Parent=gene-LVR01_02870;Dbxref=NCBI_GP:MCE2618231.1;Name=MCE2618231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728654.1;locus_tag=LVR01_02870;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCE2618231.1;transl_table=11 JAJSBG010000006.1 Genbank gene 5651 6997 . + . ID=gene-LVR01_02875;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=LVR01_02875 JAJSBG010000006.1 Protein Homology CDS 5651 6997 . + 0 ID=cds-MCE2618232.1;Parent=gene-LVR01_02875;Dbxref=NCBI_GP:MCE2618232.1;Name=MCE2618232.1;gbkey=CDS;gene=gor;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511376.1;locus_tag=LVR01_02875;product=glutathione-disulfide reductase;protein_id=MCE2618232.1;transl_table=11 JAJSBG010000006.1 Genbank gene 7163 7663 . - . ID=gene-LVR01_02880;Name=LVR01_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02880 JAJSBG010000006.1 Protein Homology CDS 7163 7663 . - 0 ID=cds-MCE2618233.1;Parent=gene-LVR01_02880;Dbxref=NCBI_GP:MCE2618233.1;Name=MCE2618233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727305.1;locus_tag=LVR01_02880;product=hypothetical protein;protein_id=MCE2618233.1;transl_table=11 JAJSBG010000006.1 Genbank gene 7660 8283 . - . ID=gene-LVR01_02885;Name=LVR01_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02885 JAJSBG010000006.1 Protein Homology CDS 7660 8283 . - 0 ID=cds-MCE2618234.1;Parent=gene-LVR01_02885;Dbxref=NCBI_GP:MCE2618234.1;Name=MCE2618234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012679836.1;locus_tag=LVR01_02885;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618234.1;transl_table=11 JAJSBG010000006.1 Genbank gene 8280 10262 . - . ID=gene-LVR01_02890;Name=LVR01_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02890 JAJSBG010000006.1 Protein Homology CDS 8280 10262 . - 0 ID=cds-MCE2618235.1;Parent=gene-LVR01_02890;Dbxref=NCBI_GP:MCE2618235.1;Name=MCE2618235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768915.1;locus_tag=LVR01_02890;product=ABC transporter permease;protein_id=MCE2618235.1;transl_table=11 JAJSBG010000006.1 Genbank gene 10328 10732 . - . ID=gene-LVR01_02895;Name=LVR01_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02895 JAJSBG010000006.1 Protein Homology CDS 10328 10732 . - 0 ID=cds-MCE2618236.1;Parent=gene-LVR01_02895;Dbxref=NCBI_GP:MCE2618236.1;Name=MCE2618236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828603.1;locus_tag=LVR01_02895;product=hypothetical protein;protein_id=MCE2618236.1;transl_table=11 JAJSBG010000006.1 Genbank gene 11092 11628 . + . ID=gene-LVR01_02900;Name=LVR01_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02900 JAJSBG010000006.1 Protein Homology CDS 11092 11628 . + 0 ID=cds-MCE2618237.1;Parent=gene-LVR01_02900;Dbxref=NCBI_GP:MCE2618237.1;Name=MCE2618237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709035.1;locus_tag=LVR01_02900;product=biotin transporter BioY;protein_id=MCE2618237.1;transl_table=11 JAJSBG010000006.1 Genbank gene 11682 11897 . - . ID=gene-LVR01_02905;Name=LVR01_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02905 JAJSBG010000006.1 Protein Homology CDS 11682 11897 . - 0 ID=cds-MCE2618238.1;Parent=gene-LVR01_02905;Dbxref=NCBI_GP:MCE2618238.1;Name=MCE2618238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807422.1;locus_tag=LVR01_02905;product=YdbC family protein;protein_id=MCE2618238.1;transl_table=11 JAJSBG010000006.1 Genbank gene 11997 12317 . + . ID=gene-LVR01_02910;Name=LVR01_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02910 JAJSBG010000006.1 Protein Homology CDS 11997 12317 . + 0 ID=cds-MCE2618239.1;Parent=gene-LVR01_02910;Dbxref=NCBI_GP:MCE2618239.1;Name=MCE2618239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216095.1;locus_tag=LVR01_02910;product=hypothetical protein;protein_id=MCE2618239.1;transl_table=11 JAJSBG010000006.1 Genbank gene 12347 12685 . - . ID=gene-LVR01_02915;Name=LVR01_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02915 JAJSBG010000006.1 Protein Homology CDS 12347 12685 . - 0 ID=cds-MCE2618240.1;Parent=gene-LVR01_02915;Dbxref=NCBI_GP:MCE2618240.1;Name=MCE2618240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196050.1;locus_tag=LVR01_02915;product=hypothetical protein;protein_id=MCE2618240.1;transl_table=11 JAJSBG010000006.1 Genbank gene 12697 13416 . - . ID=gene-LVR01_02920;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LVR01_02920 JAJSBG010000006.1 Protein Homology CDS 12697 13416 . - 0 ID=cds-MCE2618241.1;Parent=gene-LVR01_02920;Dbxref=NCBI_GP:MCE2618241.1;Name=MCE2618241.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260780.1;locus_tag=LVR01_02920;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=MCE2618241.1;transl_table=11 JAJSBG010000006.1 Genbank gene 13406 13924 . - . ID=gene-LVR01_02925;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LVR01_02925 JAJSBG010000006.1 Protein Homology CDS 13406 13924 . - 0 ID=cds-MCE2618242.1;Parent=gene-LVR01_02925;Dbxref=NCBI_GP:MCE2618242.1;Name=MCE2618242.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465641.1;locus_tag=LVR01_02925;product=ribosome maturation factor RimM;protein_id=MCE2618242.1;transl_table=11 JAJSBG010000006.1 Genbank gene 13955 14743 . - . ID=gene-LVR01_02930;Name=LVR01_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02930 JAJSBG010000006.1 Protein Homology CDS 13955 14743 . - 0 ID=cds-MCE2618243.1;Parent=gene-LVR01_02930;Dbxref=NCBI_GP:MCE2618243.1;Name=MCE2618243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819180.1;locus_tag=LVR01_02930;product=alpha/beta hydrolase;protein_id=MCE2618243.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 14886 15135 . - . ID=gene-LVR01_02935;Name=LVR01_02935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02935;pseudo=true JAJSBG010000006.1 Protein Homology CDS 14886 15135 . - 0 ID=cds-LVR01_02935;Parent=gene-LVR01_02935;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013949.1;locus_tag=LVR01_02935;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 15320 15559 . - . ID=gene-LVR01_02940;Name=kphA;gbkey=Gene;gene=kphA;gene_biotype=protein_coding;locus_tag=LVR01_02940 JAJSBG010000006.1 Protein Homology CDS 15320 15559 . - 0 ID=cds-MCE2618244.1;Parent=gene-LVR01_02940;Dbxref=NCBI_GP:MCE2618244.1;Name=MCE2618244.1;gbkey=CDS;gene=kphA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590445.1;locus_tag=LVR01_02940;product=RNA-binding protein KphA;protein_id=MCE2618244.1;transl_table=11 JAJSBG010000006.1 Genbank gene 15579 15851 . - . ID=gene-LVR01_02945;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LVR01_02945 JAJSBG010000006.1 Protein Homology CDS 15579 15851 . - 0 ID=cds-MCE2618245.1;Parent=gene-LVR01_02945;Dbxref=NCBI_GP:MCE2618245.1;Name=MCE2618245.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=LVR01_02945;product=30S ribosomal protein S16;protein_id=MCE2618245.1;transl_table=11 JAJSBG010000006.1 Genbank gene 16029 16229 . + . ID=gene-LVR01_02950;Name=LVR01_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02950 JAJSBG010000006.1 Protein Homology CDS 16029 16229 . + 0 ID=cds-MCE2618246.1;Parent=gene-LVR01_02950;Dbxref=NCBI_GP:MCE2618246.1;Name=MCE2618246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092275.1;locus_tag=LVR01_02950;product=hypothetical protein;protein_id=MCE2618246.1;transl_table=11 JAJSBG010000006.1 Genbank gene 16312 16533 . - . ID=gene-LVR01_02955;Name=LVR01_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02955 JAJSBG010000006.1 Protein Homology CDS 16312 16533 . - 0 ID=cds-MCE2618247.1;Parent=gene-LVR01_02955;Dbxref=NCBI_GP:MCE2618247.1;Name=MCE2618247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=LVR01_02955;product=hypothetical protein;protein_id=MCE2618247.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 17000 17407 . - . ID=gene-LVR01_02960;Name=LVR01_02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_02960;pseudo=true JAJSBG010000006.1 Protein Homology CDS 17000 17407 . - 0 ID=cds-LVR01_02960;Parent=gene-LVR01_02960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667635.1;locus_tag=LVR01_02960;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 17451 17789 . - . ID=gene-LVR01_02965;Name=cadX;gbkey=Gene;gene=cadX;gene_biotype=protein_coding;locus_tag=LVR01_02965 JAJSBG010000006.1 Protein Homology CDS 17451 17789 . - 0 ID=cds-MCE2618248.1;Parent=gene-LVR01_02965;Dbxref=NCBI_GP:MCE2618248.1;Name=MCE2618248.1;gbkey=CDS;gene=cadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711077.1;locus_tag=LVR01_02965;product=Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX;protein_id=MCE2618248.1;transl_table=11 JAJSBG010000006.1 Genbank gene 17801 18427 . - . ID=gene-LVR01_02970;Name=LVR01_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02970 JAJSBG010000006.1 Protein Homology CDS 17801 18427 . - 0 ID=cds-MCE2618249.1;Parent=gene-LVR01_02970;Dbxref=NCBI_GP:MCE2618249.1;Name=MCE2618249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837506.1;locus_tag=LVR01_02970;product=CadD family cadmium resistance transporter;protein_id=MCE2618249.1;transl_table=11 JAJSBG010000006.1 Genbank gene 18444 18617 . + . ID=gene-LVR01_02975;Name=LVR01_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02975 JAJSBG010000006.1 Protein Homology CDS 18444 18617 . + 0 ID=cds-MCE2618250.1;Parent=gene-LVR01_02975;Dbxref=NCBI_GP:MCE2618250.1;Name=MCE2618250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892741.1;locus_tag=LVR01_02975;product=FanG protein;protein_id=MCE2618250.1;transl_table=11 JAJSBG010000006.1 Genbank gene 19032 19610 . + . ID=gene-LVR01_02980;Name=LVR01_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02980 JAJSBG010000006.1 Protein Homology CDS 19032 19610 . + 0 ID=cds-MCE2618251.1;Parent=gene-LVR01_02980;Dbxref=NCBI_GP:MCE2618251.1;Name=MCE2618251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899343.1;locus_tag=LVR01_02980;product=DUF3796 domain-containing protein;protein_id=MCE2618251.1;transl_table=11 JAJSBG010000006.1 Genbank gene 19613 19837 . + . ID=gene-LVR01_02985;Name=LVR01_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02985 JAJSBG010000006.1 Protein Homology CDS 19613 19837 . + 0 ID=cds-MCE2618252.1;Parent=gene-LVR01_02985;Dbxref=NCBI_GP:MCE2618252.1;Name=MCE2618252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145803.1;locus_tag=LVR01_02985;product=helix-turn-helix transcriptional regulator;protein_id=MCE2618252.1;transl_table=11 JAJSBG010000006.1 Genbank gene 20167 20328 . + . ID=gene-LVR01_02990;Name=LVR01_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02990 JAJSBG010000006.1 Protein Homology CDS 20167 20328 . + 0 ID=cds-MCE2618253.1;Parent=gene-LVR01_02990;Dbxref=NCBI_GP:MCE2618253.1;Name=MCE2618253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244099.1;locus_tag=LVR01_02990;product=hypothetical protein;protein_id=MCE2618253.1;transl_table=11 JAJSBG010000006.1 Genbank gene 20436 21239 . + . ID=gene-LVR01_02995;Name=LVR01_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_02995 JAJSBG010000006.1 Protein Homology CDS 20436 21239 . + 0 ID=cds-MCE2618254.1;Parent=gene-LVR01_02995;Dbxref=NCBI_GP:MCE2618254.1;Name=MCE2618254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731914.1;locus_tag=LVR01_02995;product=peptidylprolyl isomerase;protein_id=MCE2618254.1;transl_table=11 JAJSBG010000006.1 Genbank gene 21295 22836 . - . ID=gene-LVR01_03000;Name=LVR01_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03000 JAJSBG010000006.1 Protein Homology CDS 21295 22836 . - 0 ID=cds-MCE2618255.1;Parent=gene-LVR01_03000;Dbxref=NCBI_GP:MCE2618255.1;Name=MCE2618255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918612.1;locus_tag=LVR01_03000;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618255.1;transl_table=11 JAJSBG010000006.1 Genbank gene 22838 23320 . - . ID=gene-LVR01_03005;Name=LVR01_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03005 JAJSBG010000006.1 Protein Homology CDS 22838 23320 . - 0 ID=cds-MCE2618256.1;Parent=gene-LVR01_03005;Dbxref=NCBI_GP:MCE2618256.1;Name=MCE2618256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976721.1;locus_tag=LVR01_03005;product=VanZ family protein;protein_id=MCE2618256.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 23320 24385 . - . ID=gene-LVR01_03010;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=LVR01_03010;pseudo=true JAJSBG010000006.1 Protein Homology CDS 23320 24385 . - 0 ID=cds-LVR01_03010;Parent=gene-LVR01_03010;Note=frameshifted;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804770.1;locus_tag=LVR01_03010;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 24406 24936 . - . ID=gene-LVR01_03015;Name=LVR01_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03015 JAJSBG010000006.1 Protein Homology CDS 24406 24936 . - 0 ID=cds-MCE2618257.1;Parent=gene-LVR01_03015;Dbxref=NCBI_GP:MCE2618257.1;Name=MCE2618257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522225.1;locus_tag=LVR01_03015;product=YutD family protein;protein_id=MCE2618257.1;transl_table=11 JAJSBG010000006.1 Genbank gene 25093 25698 . - . ID=gene-LVR01_03020;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LVR01_03020 JAJSBG010000006.1 Protein Homology CDS 25093 25698 . - 0 ID=cds-MCE2618258.1;Parent=gene-LVR01_03020;Dbxref=NCBI_GP:MCE2618258.1;Name=MCE2618258.1;gbkey=CDS;gene=sodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519814.1;locus_tag=LVR01_03020;product=superoxide dismutase SodA;protein_id=MCE2618258.1;transl_table=11 JAJSBG010000006.1 Genbank gene 25878 26084 . - . ID=gene-LVR01_03025;Name=LVR01_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03025 JAJSBG010000006.1 GeneMarkS-2+ CDS 25878 26084 . - 0 ID=cds-MCE2618259.1;Parent=gene-LVR01_03025;Dbxref=NCBI_GP:MCE2618259.1;Name=MCE2618259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03025;product=hypothetical protein;protein_id=MCE2618259.1;transl_table=11 JAJSBG010000006.1 Genbank gene 26160 27197 . - . ID=gene-LVR01_03030;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LVR01_03030 JAJSBG010000006.1 Protein Homology CDS 26160 27197 . - 0 ID=cds-MCE2618260.1;Parent=gene-LVR01_03030;Dbxref=NCBI_GP:MCE2618260.1;Name=MCE2618260.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845438.1;locus_tag=LVR01_03030;product=DNA polymerase III subunit delta;protein_id=MCE2618260.1;transl_table=11 JAJSBG010000006.1 Genbank gene 27231 28166 . - . ID=gene-LVR01_03035;Name=LVR01_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03035 JAJSBG010000006.1 Protein Homology CDS 27231 28166 . - 0 ID=cds-MCE2618261.1;Parent=gene-LVR01_03035;Dbxref=NCBI_GP:MCE2618261.1;Name=MCE2618261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519812.1;locus_tag=LVR01_03035;product=dihydroorotate oxidase;protein_id=MCE2618261.1;transl_table=11 JAJSBG010000006.1 Genbank gene 28614 29804 . - . ID=gene-LVR01_03040;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LVR01_03040 JAJSBG010000006.1 Protein Homology CDS 28614 29804 . - 0 ID=cds-MCE2618262.1;Parent=gene-LVR01_03040;Dbxref=NCBI_GP:MCE2618262.1;Name=MCE2618262.1;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003937.1;locus_tag=LVR01_03040;product=methionine adenosyltransferase;protein_id=MCE2618262.1;transl_table=11 JAJSBG010000006.1 Genbank gene 30300 31643 . - . ID=gene-LVR01_03045;Name=LVR01_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03045 JAJSBG010000006.1 Protein Homology CDS 30300 31643 . - 0 ID=cds-MCE2618263.1;Parent=gene-LVR01_03045;Dbxref=NCBI_GP:MCE2618263.1;Name=MCE2618263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517532.1;locus_tag=LVR01_03045;product=DEAD/DEAH box helicase;protein_id=MCE2618263.1;transl_table=11 JAJSBG010000006.1 Genbank gene 31890 32705 . - . ID=gene-LVR01_03050;Name=LVR01_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03050 JAJSBG010000006.1 Protein Homology CDS 31890 32705 . - 0 ID=cds-MCE2618264.1;Parent=gene-LVR01_03050;Dbxref=NCBI_GP:MCE2618264.1;Name=MCE2618264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398916.1;locus_tag=LVR01_03050;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MCE2618264.1;transl_table=11 JAJSBG010000006.1 Genbank gene 32757 34937 . - . ID=gene-LVR01_03055;Name=LVR01_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03055 JAJSBG010000006.1 Protein Homology CDS 32757 34937 . - 0 ID=cds-MCE2618265.1;Parent=gene-LVR01_03055;Dbxref=NCBI_GP:MCE2618265.1;Name=MCE2618265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974069.1;locus_tag=LVR01_03055;product=PTS transporter subunit IIBC;protein_id=MCE2618265.1;transl_table=11 JAJSBG010000006.1 Genbank gene 35344 36270 . - . ID=gene-LVR01_03060;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LVR01_03060 JAJSBG010000006.1 Protein Homology CDS 35344 36270 . - 0 ID=cds-MCE2618266.1;Parent=gene-LVR01_03060;Dbxref=NCBI_GP:MCE2618266.1;Name=MCE2618266.1;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398914.1;locus_tag=LVR01_03060;product=permease-like cell division protein FtsX;protein_id=MCE2618266.1;transl_table=11 JAJSBG010000006.1 Genbank gene 36263 36955 . - . ID=gene-LVR01_03065;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LVR01_03065 JAJSBG010000006.1 Protein Homology CDS 36263 36955 . - 0 ID=cds-MCE2618267.1;Parent=gene-LVR01_03065;Dbxref=NCBI_GP:MCE2618267.1;Name=MCE2618267.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130521.1;locus_tag=LVR01_03065;product=cell division ATP-binding protein FtsE;protein_id=MCE2618267.1;transl_table=11 JAJSBG010000006.1 Genbank gene 36973 38068 . - . ID=gene-LVR01_03070;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LVR01_03070 JAJSBG010000006.1 Protein Homology CDS 37997 38068 . - 0 ID=cds-MCE2618268.1;Parent=gene-LVR01_03070;Dbxref=NCBI_GP:MCE2618268.1;Name=MCE2618268.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511312.1;locus_tag=LVR01_03070;product=peptide chain release factor 2;protein_id=MCE2618268.1;transl_table=11 JAJSBG010000006.1 Protein Homology CDS 36973 37995 . - 0 ID=cds-MCE2618268.1;Parent=gene-LVR01_03070;Dbxref=NCBI_GP:MCE2618268.1;Name=MCE2618268.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511312.1;locus_tag=LVR01_03070;product=peptide chain release factor 2;protein_id=MCE2618268.1;transl_table=11 JAJSBG010000006.1 Genbank gene 38176 38832 . - . ID=gene-LVR01_03075;Name=LVR01_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03075 JAJSBG010000006.1 Protein Homology CDS 38176 38832 . - 0 ID=cds-MCE2618269.1;Parent=gene-LVR01_03075;Dbxref=NCBI_GP:MCE2618269.1;Name=MCE2618269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256822.1;locus_tag=LVR01_03075;product=CBS domain-containing protein;protein_id=MCE2618269.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 39085 39796 . - . ID=gene-LVR01_03080;Name=LVR01_03080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03080;pseudo=true JAJSBG010000006.1 Protein Homology CDS 39085 39796 . - 0 ID=cds-LVR01_03080;Parent=gene-LVR01_03080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=LVR01_03080;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 39796 40560 . - . ID=gene-LVR01_03085;Name=LVR01_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03085 JAJSBG010000006.1 Protein Homology CDS 39796 40560 . - 0 ID=cds-MCE2618270.1;Parent=gene-LVR01_03085;Dbxref=NCBI_GP:MCE2618270.1;Name=MCE2618270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=LVR01_03085;product=ABC transporter ATP-binding protein;protein_id=MCE2618270.1;transl_table=11 JAJSBG010000006.1 Genbank gene 40560 41516 . - . ID=gene-LVR01_03090;Name=LVR01_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03090 JAJSBG010000006.1 Protein Homology CDS 40560 41516 . - 0 ID=cds-MCE2618271.1;Parent=gene-LVR01_03090;Dbxref=NCBI_GP:MCE2618271.1;Name=MCE2618271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398913.1;locus_tag=LVR01_03090;product=branched-chain amino acid ABC transporter permease;protein_id=MCE2618271.1;transl_table=11 JAJSBG010000006.1 Genbank gene 41520 42389 . - . ID=gene-LVR01_03095;Name=LVR01_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03095 JAJSBG010000006.1 Protein Homology CDS 41520 42389 . - 0 ID=cds-MCE2618272.1;Parent=gene-LVR01_03095;Dbxref=NCBI_GP:MCE2618272.1;Name=MCE2618272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517552.1;locus_tag=LVR01_03095;product=branched-chain amino acid ABC transporter permease;protein_id=MCE2618272.1;transl_table=11 JAJSBG010000006.1 Genbank gene 42506 43666 . - . ID=gene-LVR01_03100;Name=LVR01_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03100 JAJSBG010000006.1 Protein Homology CDS 42506 43666 . - 0 ID=cds-MCE2618273.1;Parent=gene-LVR01_03100;Dbxref=NCBI_GP:MCE2618273.1;Name=MCE2618273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002206202.1;locus_tag=LVR01_03100;product=ABC transporter substrate-binding protein;protein_id=MCE2618273.1;transl_table=11 JAJSBG010000006.1 Genbank gene 43768 44016 . - . ID=gene-LVR01_03105;Name=LVR01_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03105 JAJSBG010000006.1 Protein Homology CDS 43768 44016 . - 0 ID=cds-MCE2618274.1;Parent=gene-LVR01_03105;Dbxref=NCBI_GP:MCE2618274.1;Name=MCE2618274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462128.1;locus_tag=LVR01_03105;product=YlbG family protein;protein_id=MCE2618274.1;transl_table=11 JAJSBG010000006.1 Genbank gene 44095 44685 . - . ID=gene-LVR01_03110;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LVR01_03110 JAJSBG010000006.1 Protein Homology CDS 44095 44685 . - 0 ID=cds-MCE2618275.1;Parent=gene-LVR01_03110;Dbxref=NCBI_GP:MCE2618275.1;Name=MCE2618275.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613477.1;locus_tag=LVR01_03110;product=ATP-dependent Clp protease proteolytic subunit ClpP;protein_id=MCE2618275.1;transl_table=11 JAJSBG010000006.1 Genbank gene 44859 45488 . - . ID=gene-LVR01_03115;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LVR01_03115 JAJSBG010000006.1 Protein Homology CDS 44859 45488 . - 0 ID=cds-MCE2618276.1;Parent=gene-LVR01_03115;Dbxref=NCBI_GP:MCE2618276.1;Name=MCE2618276.1;gbkey=CDS;gene=upp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=LVR01_03115;product=uracil phosphoribosyltransferase;protein_id=MCE2618276.1;transl_table=11 JAJSBG010000006.1 Genbank gene 45577 46044 . - . ID=gene-LVR01_03120;Name=LVR01_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03120 JAJSBG010000006.1 Protein Homology CDS 45577 46044 . - 0 ID=cds-MCE2618277.1;Parent=gene-LVR01_03120;Dbxref=NCBI_GP:MCE2618277.1;Name=MCE2618277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138511.1;locus_tag=LVR01_03120;product=cytidine/deoxycytidylate deaminase family protein;protein_id=MCE2618277.1;transl_table=11 JAJSBG010000006.1 Genbank gene 46041 46619 . - . ID=gene-LVR01_03125;Name=LVR01_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03125 JAJSBG010000006.1 Protein Homology CDS 46041 46619 . - 0 ID=cds-MCE2618278.1;Parent=gene-LVR01_03125;Dbxref=NCBI_GP:MCE2618278.1;Name=MCE2618278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004140.1;locus_tag=LVR01_03125;product=TetR/AcrR family transcriptional regulator;protein_id=MCE2618278.1;transl_table=11 JAJSBG010000006.1 Genbank gene 46744 47589 . + . ID=gene-LVR01_03130;Name=LVR01_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03130 JAJSBG010000006.1 Protein Homology CDS 46744 47589 . + 0 ID=cds-MCE2618279.1;Parent=gene-LVR01_03130;Dbxref=NCBI_GP:MCE2618279.1;Name=MCE2618279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219932.1;locus_tag=LVR01_03130;product=DegV family protein;protein_id=MCE2618279.1;transl_table=11 JAJSBG010000006.1 Genbank gene 47648 48823 . + . ID=gene-LVR01_03135;Name=LVR01_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03135 JAJSBG010000006.1 Protein Homology CDS 47648 48823 . + 0 ID=cds-MCE2618280.1;Parent=gene-LVR01_03135;Dbxref=NCBI_GP:MCE2618280.1;Name=MCE2618280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677051.1;locus_tag=LVR01_03135;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCE2618280.1;transl_table=11 JAJSBG010000006.1 Genbank gene 48866 49606 . - . ID=gene-LVR01_03140;Name=LVR01_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03140 JAJSBG010000006.1 Protein Homology CDS 48866 49606 . - 0 ID=cds-MCE2618281.1;Parent=gene-LVR01_03140;Dbxref=NCBI_GP:MCE2618281.1;Name=MCE2618281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274781.1;locus_tag=LVR01_03140;product=MerR family transcriptional regulator;protein_id=MCE2618281.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 49946 51285 . + . ID=gene-LVR01_03145;Name=LVR01_03145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03145;pseudo=true JAJSBG010000006.1 Protein Homology CDS 49946 51285 . + 0 ID=cds-LVR01_03145;Parent=gene-LVR01_03145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466604.1;locus_tag=LVR01_03145;product=sodium-dependent transporter;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 51325 52269 . - . ID=gene-LVR01_03150;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=LVR01_03150 JAJSBG010000006.1 Protein Homology CDS 51325 52269 . - 0 ID=cds-MCE2618282.1;Parent=gene-LVR01_03150;Dbxref=NCBI_GP:MCE2618282.1;Name=MCE2618282.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398143.1;locus_tag=LVR01_03150;product=mannose-6-phosphate isomerase%2C class I;protein_id=MCE2618282.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 52390 52710 . - . ID=gene-LVR01_03155;Name=LVR01_03155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03155;pseudo=true JAJSBG010000006.1 Protein Homology CDS 52390 52710 . - 0 ID=cds-LVR01_03155;Parent=gene-LVR01_03155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110363.1;locus_tag=LVR01_03155;product=family 1 glycosylhydrolase;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 52751 53523 . + . ID=gene-LVR01_03160;Name=LVR01_03160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03160;pseudo=true JAJSBG010000006.1 Protein Homology CDS 52751 53523 . + 0 ID=cds-LVR01_03160;Parent=gene-LVR01_03160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_03160;product=IS630 family transposase;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 53645 55420 . - . ID=gene-LVR01_03165;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=LVR01_03165 JAJSBG010000006.1 Protein Homology CDS 53645 55420 . - 0 ID=cds-MCE2618283.1;Parent=gene-LVR01_03165;Dbxref=NCBI_GP:MCE2618283.1;Name=MCE2618283.1;gbkey=CDS;gene=spxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191798.1;locus_tag=LVR01_03165;product=pyruvate oxidase;protein_id=MCE2618283.1;transl_table=11 JAJSBG010000006.1 Genbank pseudogene 55626 57870 . - . ID=gene-LVR01_03170;Name=LVR01_03170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03170;pseudo=true JAJSBG010000006.1 Protein Homology CDS 55626 57870 . - 0 ID=cds-LVR01_03170;Parent=gene-LVR01_03170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136280.1;locus_tag=LVR01_03170;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 JAJSBG010000006.1 Genbank gene 57880 58251 . - . ID=gene-LVR01_03175;Name=LVR01_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03175 JAJSBG010000006.1 Protein Homology CDS 57880 58251 . - 0 ID=cds-MCE2618284.1;Parent=gene-LVR01_03175;Dbxref=NCBI_GP:MCE2618284.1;Name=MCE2618284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932058.1;locus_tag=LVR01_03175;product=cupredoxin domain-containing protein;protein_id=MCE2618284.1;transl_table=11 JAJSBG010000006.1 Genbank gene 58262 58657 . - . ID=gene-LVR01_03180;Name=LVR01_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03180 JAJSBG010000006.1 Protein Homology CDS 58262 58657 . - 0 ID=cds-MCE2618285.1;Parent=gene-LVR01_03180;Dbxref=NCBI_GP:MCE2618285.1;Name=MCE2618285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256226.1;locus_tag=LVR01_03180;product=CopY/TcrY family copper transport repressor;protein_id=MCE2618285.1;transl_table=11 JAJSBG010000006.1 cmsearch riboswitch 58841 58938 . + . ID=id-JAJSBG010000006.1:58841..58938;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000006.1 Genbank gene 59022 59813 . + . ID=gene-LVR01_03185;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LVR01_03185 JAJSBG010000006.1 Protein Homology CDS 59022 59813 . + 0 ID=cds-MCE2618286.1;Parent=gene-LVR01_03185;Dbxref=NCBI_GP:MCE2618286.1;Name=MCE2618286.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221716.1;locus_tag=LVR01_03185;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MCE2618286.1;transl_table=11 JAJSBG010000006.1 Genbank gene 60019 60651 . - . ID=gene-LVR01_03190;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LVR01_03190 JAJSBG010000006.1 Protein Homology CDS 60019 60651 . - 0 ID=cds-MCE2618287.1;Parent=gene-LVR01_03190;Dbxref=NCBI_GP:MCE2618287.1;Name=MCE2618287.1;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001078228.1;locus_tag=LVR01_03190;product=thiamine phosphate synthase;protein_id=MCE2618287.1;transl_table=11 JAJSBG010000006.1 Genbank gene 60644 61447 . - . ID=gene-LVR01_03195;Name=LVR01_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03195 JAJSBG010000006.1 Protein Homology CDS 60644 61447 . - 0 ID=cds-MCE2618288.1;Parent=gene-LVR01_03195;Dbxref=NCBI_GP:MCE2618288.1;Name=MCE2618288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155192.1;locus_tag=LVR01_03195;product=hydroxyethylthiazole kinase;protein_id=MCE2618288.1;transl_table=11 JAJSBG010000006.1 Genbank gene 61447 61971 . - . ID=gene-LVR01_03200;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=LVR01_03200 JAJSBG010000006.1 Protein Homology CDS 61447 61971 . - 0 ID=cds-MCE2618289.1;Parent=gene-LVR01_03200;Dbxref=NCBI_GP:MCE2618289.1;Name=MCE2618289.1;gbkey=CDS;gene=thiW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001225563.1;locus_tag=LVR01_03200;product=energy coupling factor transporter S component ThiW;protein_id=MCE2618289.1;transl_table=11 JAJSBG010000006.1 Genbank gene 61977 62666 . - . ID=gene-LVR01_03205;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=LVR01_03205 JAJSBG010000006.1 Protein Homology CDS 61977 62666 . - 0 ID=cds-MCE2618290.1;Parent=gene-LVR01_03205;Dbxref=NCBI_GP:MCE2618290.1;Name=MCE2618290.1;gbkey=CDS;gene=tenA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000397189.1;locus_tag=LVR01_03205;product=thiaminase II;protein_id=MCE2618290.1;transl_table=11 JAJSBG010000006.1 Genbank gene 62677 63327 . - . ID=gene-LVR01_03210;Name=LVR01_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03210 JAJSBG010000006.1 Protein Homology CDS 62677 63327 . - 0 ID=cds-MCE2618291.1;Parent=gene-LVR01_03210;Dbxref=NCBI_GP:MCE2618291.1;Name=MCE2618291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241367.1;locus_tag=LVR01_03210;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCE2618291.1;transl_table=11 JAJSBG010000006.1 Genbank gene 63329 64714 . - . ID=gene-LVR01_03215;Name=LVR01_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03215 JAJSBG010000006.1 Protein Homology CDS 63329 64714 . - 0 ID=cds-MCE2618292.1;Parent=gene-LVR01_03215;Dbxref=NCBI_GP:MCE2618292.1;Name=MCE2618292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522086.1;locus_tag=LVR01_03215;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=MCE2618292.1;transl_table=11 JAJSBG010000006.1 Genbank gene 64715 65275 . - . ID=gene-LVR01_03220;Name=LVR01_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03220 JAJSBG010000006.1 Protein Homology CDS 64715 65275 . - 0 ID=cds-MCE2618293.1;Parent=gene-LVR01_03220;Dbxref=NCBI_GP:MCE2618293.1;Name=MCE2618293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915269.1;locus_tag=LVR01_03220;product=ECF transporter S component;protein_id=MCE2618293.1;transl_table=11 JAJSBG010000006.1 cmsearch riboswitch 65536 65624 . - . ID=id-JAJSBG010000006.1:65536..65624;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000006.1 Genbank gene 65740 66369 . - . ID=gene-LVR01_03225;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LVR01_03225 JAJSBG010000006.1 Protein Homology CDS 65740 66369 . - 0 ID=cds-MCE2618294.1;Parent=gene-LVR01_03225;Dbxref=NCBI_GP:MCE2618294.1;Name=MCE2618294.1;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468574.1;locus_tag=LVR01_03225;product=thiamine phosphate synthase;protein_id=MCE2618294.1;transl_table=11 JAJSBG010000006.1 Genbank gene 66371 67153 . - . ID=gene-LVR01_03230;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=LVR01_03230 JAJSBG010000006.1 Protein Homology CDS 66371 67153 . - 0 ID=cds-MCE2618295.1;Parent=gene-LVR01_03230;Dbxref=NCBI_GP:MCE2618295.1;Name=MCE2618295.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202454.1;locus_tag=LVR01_03230;product=hydroxyethylthiazole kinase;protein_id=MCE2618295.1;transl_table=11 JAJSBG010000006.1 Genbank gene 67419 68087 . - . ID=gene-LVR01_03235;Name=LVR01_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03235 JAJSBG010000006.1 Protein Homology CDS 67419 68087 . - 0 ID=cds-MCE2618296.1;Parent=gene-LVR01_03235;Dbxref=NCBI_GP:MCE2618296.1;Name=MCE2618296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449836.1;locus_tag=LVR01_03235;product=TenA family protein;protein_id=MCE2618296.1;transl_table=11 JAJSBG010000006.1 cmsearch riboswitch 68304 68392 . - . ID=id-JAJSBG010000006.1:68304..68392;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAJSBG010000006.1 Genbank gene 68541 69677 . - . ID=gene-LVR01_03240;Name=lctO;gbkey=Gene;gene=lctO;gene_biotype=protein_coding;locus_tag=LVR01_03240 JAJSBG010000006.1 Protein Homology CDS 68541 69677 . - 0 ID=cds-MCE2618297.1;Parent=gene-LVR01_03240;Dbxref=NCBI_GP:MCE2618297.1;Name=MCE2618297.1;gbkey=CDS;gene=lctO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120720.1;locus_tag=LVR01_03240;product=L-lactate oxidase;protein_id=MCE2618297.1;transl_table=11 JAJSBG010000006.1 Genbank gene 69974 70452 . - . ID=gene-LVR01_03245;Name=LVR01_03245;end_range=70452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03245;partial=true JAJSBG010000006.1 Protein Homology CDS 69974 70452 . - 2 ID=cds-MCE2618298.1;Parent=gene-LVR01_03245;Dbxref=NCBI_GP:MCE2618298.1;Name=MCE2618298.1;end_range=70452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078372828.1;locus_tag=LVR01_03245;partial=true;product=transposase;protein_id=MCE2618298.1;transl_table=11 ##sequence-region JAJSBG010000071.1 1 4572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000071.1 Genbank region 1 4572 . + . ID=JAJSBG010000071.1:1..4572;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000071.1 Genbank gene 682 978 . + . ID=gene-LVR01_10920;Name=LVR01_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10920 JAJSBG010000071.1 Protein Homology CDS 682 978 . + 0 ID=cds-MCE2619682.1;Parent=gene-LVR01_10920;Dbxref=NCBI_GP:MCE2619682.1;Name=MCE2619682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911560.1;locus_tag=LVR01_10920;product=lactococcin 972 family bacteriocin;protein_id=MCE2619682.1;transl_table=11 JAJSBG010000071.1 Genbank gene 1081 3096 . + . ID=gene-LVR01_10925;Name=LVR01_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10925 JAJSBG010000071.1 Protein Homology CDS 1081 3096 . + 0 ID=cds-MCE2619683.1;Parent=gene-LVR01_10925;Dbxref=NCBI_GP:MCE2619683.1;Name=MCE2619683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677978.1;locus_tag=LVR01_10925;product=DUF1430 domain-containing protein;protein_id=MCE2619683.1;transl_table=11 JAJSBG010000071.1 Genbank gene 3098 3730 . + . ID=gene-LVR01_10930;Name=LVR01_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10930 JAJSBG010000071.1 Protein Homology CDS 3098 3730 . + 0 ID=cds-MCE2619684.1;Parent=gene-LVR01_10930;Dbxref=NCBI_GP:MCE2619684.1;Name=MCE2619684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260353.1;locus_tag=LVR01_10930;product=ABC transporter ATP-binding protein;protein_id=MCE2619684.1;transl_table=11 JAJSBG010000071.1 Genbank pseudogene 3871 4029 . + . ID=gene-LVR01_10935;Name=LVR01_10935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10935;pseudo=true JAJSBG010000071.1 Protein Homology CDS 3871 4029 . + 0 ID=cds-LVR01_10935;Parent=gene-LVR01_10935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712961.1;locus_tag=LVR01_10935;product=competence protein ComA;pseudo=true;transl_table=11 JAJSBG010000071.1 Genbank gene 4217 4572 . - . ID=gene-LVR01_10940;Name=LVR01_10940;end_range=4572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10940;partial=true JAJSBG010000071.1 Protein Homology CDS 4217 4572 . - 2 ID=cds-MCE2619685.1;Parent=gene-LVR01_10940;Dbxref=NCBI_GP:MCE2619685.1;Name=MCE2619685.1;end_range=4572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093609.1;locus_tag=LVR01_10940;partial=true;product=XRE family transcriptional regulator;protein_id=MCE2619685.1;transl_table=11 ##sequence-region JAJSBG010000072.1 1 4454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000072.1 Genbank region 1 4454 . + . ID=JAJSBG010000072.1:1..4454;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000072.1 Genbank gene 179 838 . + . ID=gene-LVR01_10945;Name=LVR01_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10945 JAJSBG010000072.1 Protein Homology CDS 179 838 . + 0 ID=cds-MCE2619686.1;Parent=gene-LVR01_10945;Dbxref=NCBI_GP:MCE2619686.1;Name=MCE2619686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248972.1;locus_tag=LVR01_10945;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2619686.1;transl_table=11 JAJSBG010000072.1 Genbank gene 1061 1930 . + . ID=gene-LVR01_10950;Name=LVR01_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10950 JAJSBG010000072.1 Protein Homology CDS 1061 1930 . + 0 ID=cds-MCE2619687.1;Parent=gene-LVR01_10950;Dbxref=NCBI_GP:MCE2619687.1;Name=MCE2619687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348128.1;locus_tag=LVR01_10950;product=aquaporin family protein;protein_id=MCE2619687.1;transl_table=11 JAJSBG010000072.1 Genbank gene 3035 4231 . + . ID=gene-LVR01_10955;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LVR01_10955 JAJSBG010000072.1 Protein Homology CDS 3035 4231 . + 0 ID=cds-MCE2619688.1;Parent=gene-LVR01_10955;Dbxref=NCBI_GP:MCE2619688.1;Name=MCE2619688.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=LVR01_10955;product=elongation factor Tu;protein_id=MCE2619688.1;transl_table=11 ##sequence-region JAJSBG010000073.1 1 3768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000073.1 Genbank region 1 3768 . + . ID=JAJSBG010000073.1:1..3768;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000073.1 Genbank gene 49 402 . - . ID=gene-LVR01_10960;Name=LVR01_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10960 JAJSBG010000073.1 Protein Homology CDS 49 402 . - 0 ID=cds-MCE2619689.1;Parent=gene-LVR01_10960;Dbxref=NCBI_GP:MCE2619689.1;Name=MCE2619689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945719.1;locus_tag=LVR01_10960;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MCE2619689.1;transl_table=11 JAJSBG010000073.1 Genbank gene 1079 2458 . - . ID=gene-LVR01_10965;Name=LVR01_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10965 JAJSBG010000073.1 Protein Homology CDS 1079 2458 . - 0 ID=cds-MCE2619690.1;Parent=gene-LVR01_10965;Dbxref=NCBI_GP:MCE2619690.1;Name=MCE2619690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398482.1;locus_tag=LVR01_10965;product=FAD-dependent oxidoreductase;protein_id=MCE2619690.1;transl_table=11 JAJSBG010000073.1 Genbank pseudogene 2829 3474 . + . ID=gene-LVR01_10970;Name=LVR01_10970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10970;pseudo=true JAJSBG010000073.1 Protein Homology CDS 2829 3474 . + 0 ID=cds-LVR01_10970;Parent=gene-LVR01_10970;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828774.1;locus_tag=LVR01_10970;product=FAD:protein FMN transferase;pseudo=true;transl_table=11 JAJSBG010000073.1 Genbank pseudogene 3487 3594 . - . ID=gene-LVR01_10975;Name=LVR01_10975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_10975;pseudo=true JAJSBG010000073.1 Protein Homology CDS 3487 3594 . - 0 ID=cds-LVR01_10975;Parent=gene-LVR01_10975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_10975;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000074.1 1 3618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000074.1 Genbank region 1 3618 . + . ID=JAJSBG010000074.1:1..3618;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000074.1 Genbank gene 222 515 . + . ID=gene-LVR01_10980;Name=LVR01_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10980 JAJSBG010000074.1 Protein Homology CDS 222 515 . + 0 ID=cds-MCE2619691.1;Parent=gene-LVR01_10980;Dbxref=NCBI_GP:MCE2619691.1;Name=MCE2619691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748217.1;locus_tag=LVR01_10980;product=hypothetical protein;protein_id=MCE2619691.1;transl_table=11 JAJSBG010000074.1 Genbank gene 522 1895 . + . ID=gene-LVR01_10985;Name=LVR01_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10985 JAJSBG010000074.1 GeneMarkS-2+ CDS 522 1895 . + 0 ID=cds-MCE2619692.1;Parent=gene-LVR01_10985;Dbxref=NCBI_GP:MCE2619692.1;Name=MCE2619692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10985;product=hypothetical protein;protein_id=MCE2619692.1;transl_table=11 JAJSBG010000074.1 Genbank gene 1958 2722 . + . ID=gene-LVR01_10990;Name=LVR01_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10990 JAJSBG010000074.1 GeneMarkS-2+ CDS 1958 2722 . + 0 ID=cds-MCE2619693.1;Parent=gene-LVR01_10990;Dbxref=NCBI_GP:MCE2619693.1;Name=MCE2619693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_10990;product=hypothetical protein;protein_id=MCE2619693.1;transl_table=11 JAJSBG010000074.1 Genbank gene 2727 3368 . + . ID=gene-LVR01_10995;Name=LVR01_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_10995 JAJSBG010000074.1 Protein Homology CDS 2727 3368 . + 0 ID=cds-MCE2619694.1;Parent=gene-LVR01_10995;Dbxref=NCBI_GP:MCE2619694.1;Name=MCE2619694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087002.1;locus_tag=LVR01_10995;product=ATP-binding cassette domain-containing protein;protein_id=MCE2619694.1;transl_table=11 ##sequence-region JAJSBG010000075.1 1 3566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000075.1 Genbank region 1 3566 . + . ID=JAJSBG010000075.1:1..3566;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000075.1 Genbank pseudogene 1 179 . + . ID=gene-LVR01_11000;Name=LVR01_11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11000;pseudo=true JAJSBG010000075.1 Protein Homology CDS 1 179 . + 2 ID=cds-LVR01_11000;Parent=gene-LVR01_11000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_115265033.1;locus_tag=LVR01_11000;product=transposase;pseudo=true;transl_table=11 JAJSBG010000075.1 Genbank gene 127 501 . + . ID=gene-LVR01_11005;Name=LVR01_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11005 JAJSBG010000075.1 GeneMarkS-2+ CDS 127 501 . + 0 ID=cds-MCE2619695.1;Parent=gene-LVR01_11005;Dbxref=NCBI_GP:MCE2619695.1;Name=MCE2619695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_11005;product=hypothetical protein;protein_id=MCE2619695.1;transl_table=11 JAJSBG010000075.1 Genbank gene 494 1672 . + . ID=gene-LVR01_11010;Name=LVR01_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11010 JAJSBG010000075.1 Protein Homology CDS 494 1672 . + 0 ID=cds-MCE2619696.1;Parent=gene-LVR01_11010;Dbxref=NCBI_GP:MCE2619696.1;Name=MCE2619696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LVR01_11010;product=MFS transporter;protein_id=MCE2619696.1;transl_table=11 JAJSBG010000075.1 Genbank gene 1681 3261 . + . ID=gene-LVR01_11015;Name=LVR01_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11015 JAJSBG010000075.1 GeneMarkS-2+ CDS 1681 3261 . + 0 ID=cds-MCE2619697.1;Parent=gene-LVR01_11015;Dbxref=NCBI_GP:MCE2619697.1;Name=MCE2619697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_11015;product=hypothetical protein;protein_id=MCE2619697.1;transl_table=11 JAJSBG010000075.1 Genbank pseudogene 3367 3566 . - . ID=gene-LVR01_11020;Name=LVR01_11020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11020;pseudo=true JAJSBG010000075.1 Protein Homology CDS 3367 3566 . - 2 ID=cds-LVR01_11020;Parent=gene-LVR01_11020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_068988785.1;locus_tag=LVR01_11020;product=transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000076.1 1 3509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000076.1 Genbank region 1 3509 . + . ID=JAJSBG010000076.1:1..3509;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000076.1 Genbank gene 461 1765 . - . ID=gene-LVR01_11025;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LVR01_11025 JAJSBG010000076.1 Protein Homology CDS 461 1765 . - 0 ID=cds-MCE2619698.1;Parent=gene-LVR01_11025;Dbxref=NCBI_GP:MCE2619698.1;Name=MCE2619698.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=LVR01_11025;product=phosphopyruvate hydratase;protein_id=MCE2619698.1;transl_table=11 JAJSBG010000076.1 Genbank gene 1928 2374 . + . ID=gene-LVR01_11030;Name=LVR01_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11030 JAJSBG010000076.1 Protein Homology CDS 1928 2374 . + 0 ID=cds-MCE2619699.1;Parent=gene-LVR01_11030;Dbxref=NCBI_GP:MCE2619699.1;Name=MCE2619699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131081.1;locus_tag=LVR01_11030;product=YueI family protein;protein_id=MCE2619699.1;transl_table=11 JAJSBG010000076.1 Genbank gene 2371 3468 . - . ID=gene-LVR01_11035;Name=LVR01_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11035 JAJSBG010000076.1 Protein Homology CDS 2371 3468 . - 0 ID=cds-MCE2619700.1;Parent=gene-LVR01_11035;Dbxref=NCBI_GP:MCE2619700.1;Name=MCE2619700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000575200.1;locus_tag=LVR01_11035;product=glycerate kinase;protein_id=MCE2619700.1;transl_table=11 ##sequence-region JAJSBG010000077.1 1 2790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000077.1 Genbank region 1 2790 . + . ID=JAJSBG010000077.1:1..2790;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000077.1 Genbank gene 99 419 . + . ID=gene-LVR01_11040;Name=LVR01_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11040 JAJSBG010000077.1 Protein Homology CDS 99 419 . + 0 ID=cds-MCE2619701.1;Parent=gene-LVR01_11040;Dbxref=NCBI_GP:MCE2619701.1;Name=MCE2619701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381729.1;locus_tag=LVR01_11040;product=hypothetical protein;protein_id=MCE2619701.1;transl_table=11 JAJSBG010000077.1 Genbank gene 425 1207 . + . ID=gene-LVR01_11045;Name=LVR01_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11045 JAJSBG010000077.1 Protein Homology CDS 425 1207 . + 0 ID=cds-MCE2619702.1;Parent=gene-LVR01_11045;Dbxref=NCBI_GP:MCE2619702.1;Name=MCE2619702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067166.1;locus_tag=LVR01_11045;product=hypothetical protein;protein_id=MCE2619702.1;transl_table=11 JAJSBG010000077.1 Genbank gene 1216 1533 . + . ID=gene-LVR01_11050;Name=LVR01_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11050 JAJSBG010000077.1 GeneMarkS-2+ CDS 1216 1533 . + 0 ID=cds-MCE2619703.1;Parent=gene-LVR01_11050;Dbxref=NCBI_GP:MCE2619703.1;Name=MCE2619703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_11050;product=hypothetical protein;protein_id=MCE2619703.1;transl_table=11 JAJSBG010000077.1 Genbank gene 1548 1883 . + . ID=gene-LVR01_11055;Name=LVR01_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11055 JAJSBG010000077.1 Protein Homology CDS 1548 1883 . + 0 ID=cds-MCE2619704.1;Parent=gene-LVR01_11055;Dbxref=NCBI_GP:MCE2619704.1;Name=MCE2619704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191484.1;locus_tag=LVR01_11055;product=phage holin;protein_id=MCE2619704.1;transl_table=11 JAJSBG010000077.1 Genbank gene 1883 2790 . + . ID=gene-LVR01_11060;Name=LVR01_11060;end_range=2790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11060;partial=true JAJSBG010000077.1 Protein Homology CDS 1883 2790 . + 0 ID=cds-MCE2619705.1;Parent=gene-LVR01_11060;Dbxref=NCBI_GP:MCE2619705.1;Name=MCE2619705.1;end_range=2790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405235.1;locus_tag=LVR01_11060;partial=true;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=MCE2619705.1;transl_table=11 ##sequence-region JAJSBG010000078.1 1 2692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000078.1 Genbank region 1 2692 . + . ID=JAJSBG010000078.1:1..2692;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000078.1 Genbank gene 58 131 . + . ID=gene-LVR01_11065;Name=LVR01_11065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11065 JAJSBG010000078.1 tRNAscan-SE tRNA 58 131 . + . ID=rna-LVR01_11065;Parent=gene-LVR01_11065;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11065;product=tRNA-Met JAJSBG010000078.1 tRNAscan-SE exon 58 131 . + . ID=exon-LVR01_11065-1;Parent=rna-LVR01_11065;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11065;product=tRNA-Met JAJSBG010000078.1 Genbank gene 145 218 . + . ID=gene-LVR01_11070;Name=LVR01_11070;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11070 JAJSBG010000078.1 tRNAscan-SE tRNA 145 218 . + . ID=rna-LVR01_11070;Parent=gene-LVR01_11070;anticodon=(pos:179..181);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11070;product=tRNA-Ile JAJSBG010000078.1 tRNAscan-SE exon 145 218 . + . ID=exon-LVR01_11070-1;Parent=rna-LVR01_11070;anticodon=(pos:179..181);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11070;product=tRNA-Ile JAJSBG010000078.1 Genbank gene 229 318 . + . ID=gene-LVR01_11075;Name=LVR01_11075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11075 JAJSBG010000078.1 tRNAscan-SE tRNA 229 318 . + . ID=rna-LVR01_11075;Parent=gene-LVR01_11075;anticodon=(pos:265..267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11075;product=tRNA-Ser JAJSBG010000078.1 tRNAscan-SE exon 229 318 . + . ID=exon-LVR01_11075-1;Parent=rna-LVR01_11075;anticodon=(pos:265..267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11075;product=tRNA-Ser JAJSBG010000078.1 Genbank gene 329 402 . + . ID=gene-LVR01_11080;Name=LVR01_11080;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11080 JAJSBG010000078.1 tRNAscan-SE tRNA 329 402 . + . ID=rna-LVR01_11080;Parent=gene-LVR01_11080;anticodon=(pos:363..365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11080;product=tRNA-Met JAJSBG010000078.1 tRNAscan-SE exon 329 402 . + . ID=exon-LVR01_11080-1;Parent=rna-LVR01_11080;anticodon=(pos:363..365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11080;product=tRNA-Met JAJSBG010000078.1 Genbank gene 406 478 . + . ID=gene-LVR01_11085;Name=LVR01_11085;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11085 JAJSBG010000078.1 tRNAscan-SE tRNA 406 478 . + . ID=rna-LVR01_11085;Parent=gene-LVR01_11085;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11085;product=tRNA-Phe JAJSBG010000078.1 tRNAscan-SE exon 406 478 . + . ID=exon-LVR01_11085-1;Parent=rna-LVR01_11085;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11085;product=tRNA-Phe JAJSBG010000078.1 Genbank gene 498 568 . + . ID=gene-LVR01_11090;Name=LVR01_11090;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11090 JAJSBG010000078.1 tRNAscan-SE tRNA 498 568 . + . ID=rna-LVR01_11090;Parent=gene-LVR01_11090;anticodon=(pos:530..532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11090;product=tRNA-Gly JAJSBG010000078.1 tRNAscan-SE exon 498 568 . + . ID=exon-LVR01_11090-1;Parent=rna-LVR01_11090;anticodon=(pos:530..532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11090;product=tRNA-Gly JAJSBG010000078.1 Genbank gene 603 676 . + . ID=gene-LVR01_11095;Name=LVR01_11095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11095 JAJSBG010000078.1 tRNAscan-SE tRNA 603 676 . + . ID=rna-LVR01_11095;Parent=gene-LVR01_11095;anticodon=(pos:637..639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11095;product=tRNA-Ile JAJSBG010000078.1 tRNAscan-SE exon 603 676 . + . ID=exon-LVR01_11095-1;Parent=rna-LVR01_11095;anticodon=(pos:637..639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11095;product=tRNA-Ile JAJSBG010000078.1 Genbank gene 683 770 . + . ID=gene-LVR01_11100;Name=LVR01_11100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11100 JAJSBG010000078.1 tRNAscan-SE tRNA 683 770 . + . ID=rna-LVR01_11100;Parent=gene-LVR01_11100;anticodon=(pos:717..719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11100;product=tRNA-Ser JAJSBG010000078.1 tRNAscan-SE exon 683 770 . + . ID=exon-LVR01_11100-1;Parent=rna-LVR01_11100;anticodon=(pos:717..719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11100;product=tRNA-Ser JAJSBG010000078.1 Genbank gene 998 1933 . - . ID=gene-LVR01_11105;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LVR01_11105 JAJSBG010000078.1 Protein Homology CDS 998 1933 . - 0 ID=cds-MCE2619706.1;Parent=gene-LVR01_11105;Dbxref=NCBI_GP:MCE2619706.1;Name=MCE2619706.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844514.1;locus_tag=LVR01_11105;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=MCE2619706.1;transl_table=11 JAJSBG010000078.1 Genbank pseudogene 1930 2567 . - . ID=gene-LVR01_11110;Name=LVR01_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11110;pseudo=true JAJSBG010000078.1 Protein Homology CDS 1930 2567 . - 0 ID=cds-LVR01_11110;Parent=gene-LVR01_11110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959966.1;locus_tag=LVR01_11110;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000079.1 1 2344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000079.1 Genbank region 1 2344 . + . ID=JAJSBG010000079.1:1..2344;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000079.1 Genbank gene 121 2100 . - . ID=gene-LVR01_11115;Name=LVR01_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11115 JAJSBG010000079.1 Protein Homology CDS 121 2100 . - 0 ID=cds-MCE2619707.1;Parent=gene-LVR01_11115;Dbxref=NCBI_GP:MCE2619707.1;Name=MCE2619707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398389.1;locus_tag=LVR01_11115;product=peptide ABC transporter substrate-binding protein;protein_id=MCE2619707.1;transl_table=11 ##sequence-region JAJSBG010000007.1 1 67728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000007.1 Genbank region 1 67728 . + . ID=JAJSBG010000007.1:1..67728;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000007.1 Genbank gene 1 196 . + . ID=gene-LVR01_03250;Name=LVR01_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03250;partial=true;start_range=.,1 JAJSBG010000007.1 Protein Homology CDS 1 196 . + 1 ID=cds-MCE2618299.1;Parent=gene-LVR01_03250;Dbxref=NCBI_GP:MCE2618299.1;Name=MCE2618299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=LVR01_03250;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2618299.1;start_range=.,1;transl_table=11 JAJSBG010000007.1 Genbank gene 372 1502 . + . ID=gene-LVR01_03255;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LVR01_03255 JAJSBG010000007.1 Protein Homology CDS 372 1502 . + 0 ID=cds-MCE2618300.1;Parent=gene-LVR01_03255;Dbxref=NCBI_GP:MCE2618300.1;Name=MCE2618300.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730339.1;locus_tag=LVR01_03255;product=radical SAM family heme chaperone HemW;protein_id=MCE2618300.1;transl_table=11 JAJSBG010000007.1 Genbank gene 1507 2244 . + . ID=gene-LVR01_03260;Name=LVR01_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03260 JAJSBG010000007.1 Protein Homology CDS 1507 2244 . + 0 ID=cds-MCE2618301.1;Parent=gene-LVR01_03260;Dbxref=NCBI_GP:MCE2618301.1;Name=MCE2618301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258504.1;locus_tag=LVR01_03260;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=MCE2618301.1;transl_table=11 JAJSBG010000007.1 Genbank gene 2255 3028 . + . ID=gene-LVR01_03265;Name=LVR01_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03265 JAJSBG010000007.1 Protein Homology CDS 2255 3028 . + 0 ID=cds-MCE2618302.1;Parent=gene-LVR01_03265;Dbxref=NCBI_GP:MCE2618302.1;Name=MCE2618302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258500.1;locus_tag=LVR01_03265;product=TIGR01457 family HAD-type hydrolase;protein_id=MCE2618302.1;transl_table=11 JAJSBG010000007.1 Genbank gene 3018 3635 . + . ID=gene-LVR01_03270;Name=LVR01_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03270 JAJSBG010000007.1 Protein Homology CDS 3018 3635 . + 0 ID=cds-MCE2618303.1;Parent=gene-LVR01_03270;Dbxref=NCBI_GP:MCE2618303.1;Name=MCE2618303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850480.1;locus_tag=LVR01_03270;product=TIGR01906 family membrane protein;protein_id=MCE2618303.1;transl_table=11 JAJSBG010000007.1 Genbank gene 3844 4245 . + . ID=gene-LVR01_03275;Name=LVR01_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03275 JAJSBG010000007.1 Protein Homology CDS 3844 4245 . + 0 ID=cds-MCE2618304.1;Parent=gene-LVR01_03275;Dbxref=NCBI_GP:MCE2618304.1;Name=MCE2618304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007556665.1;locus_tag=LVR01_03275;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=MCE2618304.1;transl_table=11 JAJSBG010000007.1 Genbank gene 4245 4523 . + . ID=gene-LVR01_03280;Name=LVR01_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03280 JAJSBG010000007.1 Protein Homology CDS 4245 4523 . + 0 ID=cds-MCE2618305.1;Parent=gene-LVR01_03280;Dbxref=NCBI_GP:MCE2618305.1;Name=MCE2618305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252549.1;locus_tag=LVR01_03280;product=UPF0223 family protein;protein_id=MCE2618305.1;transl_table=11 JAJSBG010000007.1 Genbank gene 4513 5286 . + . ID=gene-LVR01_03285;Name=LVR01_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03285 JAJSBG010000007.1 Protein Homology CDS 4513 5286 . + 0 ID=cds-MCE2618306.1;Parent=gene-LVR01_03285;Dbxref=NCBI_GP:MCE2618306.1;Name=MCE2618306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863698.1;locus_tag=LVR01_03285;product=inositol monophosphatase family protein;protein_id=MCE2618306.1;transl_table=11 JAJSBG010000007.1 Genbank gene 5287 6591 . + . ID=gene-LVR01_03290;Name=LVR01_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03290 JAJSBG010000007.1 Protein Homology CDS 5287 6591 . + 0 ID=cds-MCE2618307.1;Parent=gene-LVR01_03290;Dbxref=NCBI_GP:MCE2618307.1;Name=MCE2618307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001160253.1;locus_tag=LVR01_03290;product=RsmF rRNA methyltransferase first C-terminal domain-containing protein;protein_id=MCE2618307.1;transl_table=11 JAJSBG010000007.1 Genbank gene 7277 8155 . + . ID=gene-LVR01_03295;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LVR01_03295 JAJSBG010000007.1 Protein Homology CDS 7277 8155 . + 0 ID=cds-MCE2618308.1;Parent=gene-LVR01_03295;Dbxref=NCBI_GP:MCE2618308.1;Name=MCE2618308.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746338.1;locus_tag=LVR01_03295;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=MCE2618308.1;transl_table=11 JAJSBG010000007.1 Genbank gene 8155 9072 . + . ID=gene-LVR01_03300;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LVR01_03300 JAJSBG010000007.1 Protein Homology CDS 8155 9072 . + 0 ID=cds-MCE2618309.1;Parent=gene-LVR01_03300;Dbxref=NCBI_GP:MCE2618309.1;Name=MCE2618309.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378778.1;locus_tag=LVR01_03300;product=phosphate ABC transporter permease subunit PstC;protein_id=MCE2618309.1;transl_table=11 JAJSBG010000007.1 Genbank gene 9062 9946 . + . ID=gene-LVR01_03305;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LVR01_03305 JAJSBG010000007.1 Protein Homology CDS 9062 9946 . + 0 ID=cds-MCE2618310.1;Parent=gene-LVR01_03305;Dbxref=NCBI_GP:MCE2618310.1;Name=MCE2618310.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001201787.1;locus_tag=LVR01_03305;product=phosphate ABC transporter permease PstA;protein_id=MCE2618310.1;transl_table=11 JAJSBG010000007.1 Genbank gene 9957 10760 . + . ID=gene-LVR01_03310;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LVR01_03310 JAJSBG010000007.1 Protein Homology CDS 9957 10760 . + 0 ID=cds-MCE2618311.1;Parent=gene-LVR01_03310;Dbxref=NCBI_GP:MCE2618311.1;Name=MCE2618311.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852852.1;locus_tag=LVR01_03310;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MCE2618311.1;transl_table=11 JAJSBG010000007.1 Genbank gene 10773 11531 . + . ID=gene-LVR01_03315;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LVR01_03315 JAJSBG010000007.1 Protein Homology CDS 10773 11531 . + 0 ID=cds-MCE2618312.1;Parent=gene-LVR01_03315;Dbxref=NCBI_GP:MCE2618312.1;Name=MCE2618312.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713134.1;locus_tag=LVR01_03315;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MCE2618312.1;transl_table=11 JAJSBG010000007.1 Genbank gene 11543 12196 . + . ID=gene-LVR01_03320;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LVR01_03320 JAJSBG010000007.1 Protein Homology CDS 11543 12196 . + 0 ID=cds-MCE2618313.1;Parent=gene-LVR01_03320;Dbxref=NCBI_GP:MCE2618313.1;Name=MCE2618313.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946475.1;locus_tag=LVR01_03320;product=phosphate signaling complex protein PhoU;protein_id=MCE2618313.1;transl_table=11 JAJSBG010000007.1 Genbank gene 12288 12755 . + . ID=gene-LVR01_03325;Name=LVR01_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03325 JAJSBG010000007.1 Protein Homology CDS 12288 12755 . + 0 ID=cds-MCE2618314.1;Parent=gene-LVR01_03325;Dbxref=NCBI_GP:MCE2618314.1;Name=MCE2618314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371660.1;locus_tag=LVR01_03325;product=NUDIX domain-containing protein;protein_id=MCE2618314.1;transl_table=11 JAJSBG010000007.1 Genbank gene 12875 13690 . + . ID=gene-LVR01_03330;Name=LVR01_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03330 JAJSBG010000007.1 Protein Homology CDS 12875 13690 . + 0 ID=cds-MCE2618315.1;Parent=gene-LVR01_03330;Dbxref=NCBI_GP:MCE2618315.1;Name=MCE2618315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837371.1;locus_tag=LVR01_03330;product=ABC transporter substrate-binding protein;protein_id=MCE2618315.1;transl_table=11 JAJSBG010000007.1 Genbank gene 13712 14983 . - . ID=gene-LVR01_03335;Name=LVR01_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03335 JAJSBG010000007.1 Protein Homology CDS 13712 14983 . - 0 ID=cds-MCE2618316.1;Parent=gene-LVR01_03335;Dbxref=NCBI_GP:MCE2618316.1;Name=MCE2618316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397859.1;locus_tag=LVR01_03335;product=PLP-dependent aminotransferase family protein;protein_id=MCE2618316.1;transl_table=11 JAJSBG010000007.1 Genbank gene 15399 15545 . + . ID=gene-LVR01_03340;Name=LVR01_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03340 JAJSBG010000007.1 Protein Homology CDS 15399 15545 . + 0 ID=cds-MCE2618317.1;Parent=gene-LVR01_03340;Dbxref=NCBI_GP:MCE2618317.1;Name=MCE2618317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669513.1;locus_tag=LVR01_03340;product=hypothetical protein;protein_id=MCE2618317.1;transl_table=11 JAJSBG010000007.1 Genbank gene 15546 15920 . + . ID=gene-LVR01_03345;Name=LVR01_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03345 JAJSBG010000007.1 Protein Homology CDS 15546 15920 . + 0 ID=cds-MCE2618318.1;Parent=gene-LVR01_03345;Dbxref=NCBI_GP:MCE2618318.1;Name=MCE2618318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342870.1;locus_tag=LVR01_03345;product=hypothetical protein;protein_id=MCE2618318.1;transl_table=11 JAJSBG010000007.1 Genbank gene 16403 17134 . + . ID=gene-LVR01_03350;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=LVR01_03350 JAJSBG010000007.1 Protein Homology CDS 16403 17134 . + 0 ID=cds-MCE2618319.1;Parent=gene-LVR01_03350;Dbxref=NCBI_GP:MCE2618319.1;Name=MCE2618319.1;gbkey=CDS;gene=budA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000360290.1;locus_tag=LVR01_03350;product=acetolactate decarboxylase;protein_id=MCE2618319.1;transl_table=11 JAJSBG010000007.1 Genbank gene 17144 17896 . + . ID=gene-LVR01_03355;Name=LVR01_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03355 JAJSBG010000007.1 Protein Homology CDS 17144 17896 . + 0 ID=cds-MCE2618320.1;Parent=gene-LVR01_03355;Dbxref=NCBI_GP:MCE2618320.1;Name=MCE2618320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152219.1;locus_tag=LVR01_03355;product=YhfC family glutamic-type intramembrane protease;protein_id=MCE2618320.1;transl_table=11 JAJSBG010000007.1 Genbank gene 18008 18913 . + . ID=gene-LVR01_03360;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LVR01_03360 JAJSBG010000007.1 Protein Homology CDS 18008 18913 . + 0 ID=cds-MCE2618321.1;Parent=gene-LVR01_03360;Dbxref=NCBI_GP:MCE2618321.1;Name=MCE2618321.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116193.1;locus_tag=LVR01_03360;product=UDP-N-acetylmuramate dehydrogenase;protein_id=MCE2618321.1;transl_table=11 JAJSBG010000007.1 Genbank gene 19073 20230 . + . ID=gene-LVR01_03365;Name=LVR01_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03365 JAJSBG010000007.1 Protein Homology CDS 19073 20230 . + 0 ID=cds-MCE2618322.1;Parent=gene-LVR01_03365;Dbxref=NCBI_GP:MCE2618322.1;Name=MCE2618322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372333.1;locus_tag=LVR01_03365;product=ABC transporter ATP-binding protein;protein_id=MCE2618322.1;transl_table=11 JAJSBG010000007.1 Genbank gene 20211 21017 . + . ID=gene-LVR01_03370;Name=LVR01_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03370 JAJSBG010000007.1 Protein Homology CDS 20211 21017 . + 0 ID=cds-MCE2618323.1;Parent=gene-LVR01_03370;Dbxref=NCBI_GP:MCE2618323.1;Name=MCE2618323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398755.1;locus_tag=LVR01_03370;product=ABC transporter permease;protein_id=MCE2618323.1;transl_table=11 JAJSBG010000007.1 Genbank gene 21014 21787 . + . ID=gene-LVR01_03375;Name=LVR01_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03375 JAJSBG010000007.1 Protein Homology CDS 21014 21787 . + 0 ID=cds-MCE2618324.1;Parent=gene-LVR01_03375;Dbxref=NCBI_GP:MCE2618324.1;Name=MCE2618324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398754.1;locus_tag=LVR01_03375;product=ABC transporter permease;protein_id=MCE2618324.1;transl_table=11 JAJSBG010000007.1 Genbank gene 21784 22854 . + . ID=gene-LVR01_03380;Name=LVR01_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03380 JAJSBG010000007.1 Protein Homology CDS 21784 22854 . + 0 ID=cds-MCE2618325.1;Parent=gene-LVR01_03380;Dbxref=NCBI_GP:MCE2618325.1;Name=MCE2618325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725675.1;locus_tag=LVR01_03380;product=ABC transporter substrate-binding protein;protein_id=MCE2618325.1;transl_table=11 JAJSBG010000007.1 Genbank gene 23117 25909 . + . ID=gene-LVR01_03385;Name=LVR01_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03385 JAJSBG010000007.1 Protein Homology CDS 23117 25909 . + 0 ID=cds-MCE2618326.1;Parent=gene-LVR01_03385;Dbxref=NCBI_GP:MCE2618326.1;Name=MCE2618326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085251.1;locus_tag=LVR01_03385;product=class I SAM-dependent DNA methyltransferase;protein_id=MCE2618326.1;transl_table=11 JAJSBG010000007.1 Genbank gene 25906 27837 . + . ID=gene-LVR01_03390;Name=LVR01_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03390 JAJSBG010000007.1 Protein Homology CDS 25906 27837 . + 0 ID=cds-MCE2618327.1;Parent=gene-LVR01_03390;Dbxref=NCBI_GP:MCE2618327.1;Name=MCE2618327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203246.1;locus_tag=LVR01_03390;product=DEAD/DEAH box helicase family protein;protein_id=MCE2618327.1;transl_table=11 JAJSBG010000007.1 Genbank gene 27830 28183 . + . ID=gene-LVR01_03395;Name=LVR01_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03395 JAJSBG010000007.1 GeneMarkS-2+ CDS 27830 28183 . + 0 ID=cds-MCE2618328.1;Parent=gene-LVR01_03395;Dbxref=NCBI_GP:MCE2618328.1;Name=MCE2618328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03395;product=hypothetical protein;protein_id=MCE2618328.1;transl_table=11 JAJSBG010000007.1 Genbank gene 28176 28988 . + . ID=gene-LVR01_03400;Name=LVR01_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03400 JAJSBG010000007.1 Protein Homology CDS 28176 28988 . + 0 ID=cds-MCE2618329.1;Parent=gene-LVR01_03400;Dbxref=NCBI_GP:MCE2618329.1;Name=MCE2618329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=LVR01_03400;product=GIY-YIG nuclease family protein;protein_id=MCE2618329.1;transl_table=11 JAJSBG010000007.1 Genbank gene 29074 29409 . + . ID=gene-LVR01_03405;Name=LVR01_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03405 JAJSBG010000007.1 Protein Homology CDS 29074 29409 . + 0 ID=cds-MCE2618330.1;Parent=gene-LVR01_03405;Dbxref=NCBI_GP:MCE2618330.1;Name=MCE2618330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661303.1;locus_tag=LVR01_03405;product=hypothetical protein;protein_id=MCE2618330.1;transl_table=11 JAJSBG010000007.1 Genbank gene 29713 30198 . + . ID=gene-LVR01_03410;Name=LVR01_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03410 JAJSBG010000007.1 Protein Homology CDS 29713 30198 . + 0 ID=cds-MCE2618331.1;Parent=gene-LVR01_03410;Dbxref=NCBI_GP:MCE2618331.1;Name=MCE2618331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000847073.1;locus_tag=LVR01_03410;product=LURP-one-related family protein;protein_id=MCE2618331.1;transl_table=11 JAJSBG010000007.1 Genbank gene 30220 32838 . + . ID=gene-LVR01_03415;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LVR01_03415 JAJSBG010000007.1 Protein Homology CDS 30220 32838 . + 0 ID=cds-MCE2618332.1;Parent=gene-LVR01_03415;Dbxref=NCBI_GP:MCE2618332.1;Name=MCE2618332.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130635.1;locus_tag=LVR01_03415;product=alanine--tRNA ligase;protein_id=MCE2618332.1;transl_table=11 JAJSBG010000007.1 Genbank gene 32929 34383 . - . ID=gene-LVR01_03420;Name=LVR01_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03420 JAJSBG010000007.1 Protein Homology CDS 32929 34383 . - 0 ID=cds-MCE2618333.1;Parent=gene-LVR01_03420;Dbxref=NCBI_GP:MCE2618333.1;Name=MCE2618333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181079.1;locus_tag=LVR01_03420;product=alpha-amylase;protein_id=MCE2618333.1;transl_table=11 JAJSBG010000007.1 Genbank gene 34564 35313 . + . ID=gene-LVR01_03425;Name=LVR01_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03425 JAJSBG010000007.1 Protein Homology CDS 34564 35313 . + 0 ID=cds-MCE2618334.1;Parent=gene-LVR01_03425;Dbxref=NCBI_GP:MCE2618334.1;Name=MCE2618334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569185.1;locus_tag=LVR01_03425;product=ABC transporter ATP-binding protein;protein_id=MCE2618334.1;transl_table=11 JAJSBG010000007.1 Genbank pseudogene 35294 36929 . + . ID=gene-LVR01_03430;Name=LVR01_03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03430;pseudo=true JAJSBG010000007.1 Protein Homology CDS 35294 36929 . + 0 ID=cds-LVR01_03430;Parent=gene-LVR01_03430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237556.1;locus_tag=LVR01_03430;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000007.1 Genbank gene 37415 37675 . - . ID=gene-LVR01_03435;Name=LVR01_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03435 JAJSBG010000007.1 GeneMarkS-2+ CDS 37415 37675 . - 0 ID=cds-MCE2618335.1;Parent=gene-LVR01_03435;Dbxref=NCBI_GP:MCE2618335.1;Name=MCE2618335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03435;product=hypothetical protein;protein_id=MCE2618335.1;transl_table=11 JAJSBG010000007.1 Genbank gene 37692 39809 . - . ID=gene-LVR01_03440;Name=LVR01_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03440 JAJSBG010000007.1 Protein Homology CDS 37692 39809 . - 0 ID=cds-MCE2618336.1;Parent=gene-LVR01_03440;Dbxref=NCBI_GP:MCE2618336.1;Name=MCE2618336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754514.1;locus_tag=LVR01_03440;product=LTA synthase family protein;protein_id=MCE2618336.1;transl_table=11 JAJSBG010000007.1 Genbank gene 39959 41122 . + . ID=gene-LVR01_03445;Name=LVR01_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03445 JAJSBG010000007.1 Protein Homology CDS 39959 41122 . + 0 ID=cds-MCE2618337.1;Parent=gene-LVR01_03445;Dbxref=NCBI_GP:MCE2618337.1;Name=MCE2618337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837533.1;locus_tag=LVR01_03445;product=class I SAM-dependent rRNA methyltransferase;protein_id=MCE2618337.1;transl_table=11 JAJSBG010000007.1 Genbank gene 41119 41796 . + . ID=gene-LVR01_03450;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=LVR01_03450 JAJSBG010000007.1 Protein Homology CDS 41119 41796 . + 0 ID=cds-MCE2618338.1;Parent=gene-LVR01_03450;Dbxref=NCBI_GP:MCE2618338.1;Name=MCE2618338.1;gbkey=CDS;gene=aroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780376.1;locus_tag=LVR01_03450;product=type I 3-dehydroquinate dehydratase;protein_id=MCE2618338.1;transl_table=11 JAJSBG010000007.1 Genbank gene 41786 42640 . + . ID=gene-LVR01_03455;Name=LVR01_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03455 JAJSBG010000007.1 Protein Homology CDS 41786 42640 . + 0 ID=cds-MCE2618339.1;Parent=gene-LVR01_03455;Dbxref=NCBI_GP:MCE2618339.1;Name=MCE2618339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258171.1;locus_tag=LVR01_03455;product=shikimate dehydrogenase;protein_id=MCE2618339.1;transl_table=11 JAJSBG010000007.1 Genbank gene 42659 43726 . + . ID=gene-LVR01_03460;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LVR01_03460 JAJSBG010000007.1 Protein Homology CDS 42659 43726 . + 0 ID=cds-MCE2618340.1;Parent=gene-LVR01_03460;Dbxref=NCBI_GP:MCE2618340.1;Name=MCE2618340.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308136.1;locus_tag=LVR01_03460;product=3-dehydroquinate synthase;protein_id=MCE2618340.1;transl_table=11 JAJSBG010000007.1 Genbank gene 43736 44902 . + . ID=gene-LVR01_03465;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LVR01_03465 JAJSBG010000007.1 Protein Homology CDS 43736 44902 . + 0 ID=cds-MCE2618341.1;Parent=gene-LVR01_03465;Dbxref=NCBI_GP:MCE2618341.1;Name=MCE2618341.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259785.1;locus_tag=LVR01_03465;product=chorismate synthase;protein_id=MCE2618341.1;transl_table=11 JAJSBG010000007.1 Genbank gene 44912 46015 . + . ID=gene-LVR01_03470;Name=LVR01_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03470 JAJSBG010000007.1 Protein Homology CDS 44912 46015 . + 0 ID=cds-MCE2618342.1;Parent=gene-LVR01_03470;Dbxref=NCBI_GP:MCE2618342.1;Name=MCE2618342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140485.1;locus_tag=LVR01_03470;product=prephenate dehydrogenase;protein_id=MCE2618342.1;transl_table=11 JAJSBG010000007.1 Genbank gene 46026 46175 . + . ID=gene-LVR01_03475;Name=LVR01_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03475 JAJSBG010000007.1 Protein Homology CDS 46026 46175 . + 0 ID=cds-MCE2618343.1;Parent=gene-LVR01_03475;Dbxref=NCBI_GP:MCE2618343.1;Name=MCE2618343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124153.1;locus_tag=LVR01_03475;product=hypothetical protein;protein_id=MCE2618343.1;transl_table=11 JAJSBG010000007.1 Genbank gene 46332 46619 . + . ID=gene-LVR01_03480;Name=LVR01_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03480 JAJSBG010000007.1 GeneMarkS-2+ CDS 46332 46619 . + 0 ID=cds-MCE2618344.1;Parent=gene-LVR01_03480;Dbxref=NCBI_GP:MCE2618344.1;Name=MCE2618344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03480;product=hypothetical protein;protein_id=MCE2618344.1;transl_table=11 JAJSBG010000007.1 Genbank gene 46673 47011 . + . ID=gene-LVR01_03485;Name=LVR01_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03485 JAJSBG010000007.1 Protein Homology CDS 46673 47011 . + 0 ID=cds-MCE2618345.1;Parent=gene-LVR01_03485;Dbxref=NCBI_GP:MCE2618345.1;Name=MCE2618345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065990.1;locus_tag=LVR01_03485;product=YlbF/YmcA family competence regulator;protein_id=MCE2618345.1;transl_table=11 JAJSBG010000007.1 Genbank gene 47102 48385 . + . ID=gene-LVR01_03490;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LVR01_03490 JAJSBG010000007.1 Protein Homology CDS 47102 48385 . + 0 ID=cds-MCE2618346.1;Parent=gene-LVR01_03490;Dbxref=NCBI_GP:MCE2618346.1;Name=MCE2618346.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236106.1;locus_tag=LVR01_03490;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MCE2618346.1;transl_table=11 JAJSBG010000007.1 Genbank gene 48378 48854 . + . ID=gene-LVR01_03495;Name=LVR01_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03495 JAJSBG010000007.1 Protein Homology CDS 48378 48854 . + 0 ID=cds-MCE2618347.1;Parent=gene-LVR01_03495;Dbxref=NCBI_GP:MCE2618347.1;Name=MCE2618347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397876.1;locus_tag=LVR01_03495;product=shikimate kinase;protein_id=MCE2618347.1;transl_table=11 JAJSBG010000007.1 Genbank gene 48851 49717 . + . ID=gene-LVR01_03500;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LVR01_03500 JAJSBG010000007.1 Protein Homology CDS 48851 49717 . + 0 ID=cds-MCE2618348.1;Parent=gene-LVR01_03500;Dbxref=NCBI_GP:MCE2618348.1;Name=MCE2618348.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686418.1;locus_tag=LVR01_03500;product=prephenate dehydratase;protein_id=MCE2618348.1;transl_table=11 JAJSBG010000007.1 Genbank gene 49696 50970 . + . ID=gene-LVR01_03505;Name=psr;gbkey=Gene;gene=psr;gene_biotype=protein_coding;locus_tag=LVR01_03505 JAJSBG010000007.1 Protein Homology CDS 49696 50970 . + 0 ID=cds-MCE2618349.1;Parent=gene-LVR01_03505;Dbxref=NCBI_GP:MCE2618349.1;Name=MCE2618349.1;gbkey=CDS;gene=psr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032347.1;locus_tag=LVR01_03505;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase Psr;protein_id=MCE2618349.1;transl_table=11 JAJSBG010000007.1 Genbank gene 51249 52094 . + . ID=gene-LVR01_03510;Name=LVR01_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03510 JAJSBG010000007.1 Protein Homology CDS 51249 52094 . + 0 ID=cds-MCE2618350.1;Parent=gene-LVR01_03510;Dbxref=NCBI_GP:MCE2618350.1;Name=MCE2618350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061982.1;locus_tag=LVR01_03510;product=phosphorylcholine transferase LicD;protein_id=MCE2618350.1;transl_table=11 JAJSBG010000007.1 Genbank gene 52084 53187 . + . ID=gene-LVR01_03515;Name=LVR01_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03515 JAJSBG010000007.1 Protein Homology CDS 52084 53187 . + 0 ID=cds-MCE2618351.1;Parent=gene-LVR01_03515;Dbxref=NCBI_GP:MCE2618351.1;Name=MCE2618351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225894.1;locus_tag=LVR01_03515;product=glycosyltransferase;protein_id=MCE2618351.1;transl_table=11 JAJSBG010000007.1 Genbank gene 53189 54175 . + . ID=gene-LVR01_03520;Name=LVR01_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03520 JAJSBG010000007.1 Protein Homology CDS 53189 54175 . + 0 ID=cds-MCE2618352.1;Parent=gene-LVR01_03520;Dbxref=NCBI_GP:MCE2618352.1;Name=MCE2618352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000446977.1;locus_tag=LVR01_03520;product=glycosyltransferase;protein_id=MCE2618352.1;transl_table=11 JAJSBG010000007.1 Genbank pseudogene 54191 55621 . + . ID=gene-LVR01_03525;Name=LVR01_03525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03525;pseudo=true JAJSBG010000007.1 Protein Homology CDS 54191 55621 . + 0 ID=cds-LVR01_03525;Parent=gene-LVR01_03525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565082.1;locus_tag=LVR01_03525;product=O-antigen polysaccharide polymerase Wzy family protein;pseudo=true;transl_table=11 JAJSBG010000007.1 Genbank gene 55652 56686 . + . ID=gene-LVR01_03530;Name=LVR01_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03530 JAJSBG010000007.1 Protein Homology CDS 55652 56686 . + 0 ID=cds-MCE2618353.1;Parent=gene-LVR01_03530;Dbxref=NCBI_GP:MCE2618353.1;Name=MCE2618353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461501.1;locus_tag=LVR01_03530;product=prephenate dehydratase;protein_id=MCE2618353.1;transl_table=11 JAJSBG010000007.1 Genbank gene 56888 57625 . + . ID=gene-LVR01_03535;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=LVR01_03535 JAJSBG010000007.1 Protein Homology CDS 56888 57625 . + 0 ID=cds-MCE2618354.1;Parent=gene-LVR01_03535;Dbxref=NCBI_GP:MCE2618354.1;Name=MCE2618354.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782680.1;locus_tag=LVR01_03535;product=adaptor protein MecA;protein_id=MCE2618354.1;transl_table=11 JAJSBG010000007.1 Genbank gene 57778 59064 . + . ID=gene-LVR01_03540;Name=LVR01_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03540 JAJSBG010000007.1 Protein Homology CDS 57778 59064 . + 0 ID=cds-MCE2618355.1;Parent=gene-LVR01_03540;Dbxref=NCBI_GP:MCE2618355.1;Name=MCE2618355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398744.1;locus_tag=LVR01_03540;product=homoserine dehydrogenase;protein_id=MCE2618355.1;transl_table=11 JAJSBG010000007.1 Genbank gene 59066 59935 . + . ID=gene-LVR01_03545;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LVR01_03545 JAJSBG010000007.1 Protein Homology CDS 59066 59935 . + 0 ID=cds-MCE2618356.1;Parent=gene-LVR01_03545;Dbxref=NCBI_GP:MCE2618356.1;Name=MCE2618356.1;gbkey=CDS;gene=thrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692406.1;locus_tag=LVR01_03545;product=homoserine kinase;protein_id=MCE2618356.1;transl_table=11 JAJSBG010000007.1 Genbank gene 60011 60133 . + . ID=gene-LVR01_03550;Name=LVR01_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03550 JAJSBG010000007.1 GeneMarkS-2+ CDS 60011 60133 . + 0 ID=cds-MCE2618357.1;Parent=gene-LVR01_03550;Dbxref=NCBI_GP:MCE2618357.1;Name=MCE2618357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03550;product=chlorohydrolase;protein_id=MCE2618357.1;transl_table=11 JAJSBG010000007.1 Genbank gene 60194 61132 . + . ID=gene-LVR01_03555;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LVR01_03555 JAJSBG010000007.1 Protein Homology CDS 60194 61132 . + 0 ID=cds-MCE2618358.1;Parent=gene-LVR01_03555;Dbxref=NCBI_GP:MCE2618358.1;Name=MCE2618358.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865281.1;locus_tag=LVR01_03555;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=MCE2618358.1;transl_table=11 JAJSBG010000007.1 Genbank gene 61190 62914 . + . ID=gene-LVR01_03560;Name=LVR01_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03560 JAJSBG010000007.1 Protein Homology CDS 61190 62914 . + 0 ID=cds-MCE2618359.1;Parent=gene-LVR01_03560;Dbxref=NCBI_GP:MCE2618359.1;Name=MCE2618359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398743.1;locus_tag=LVR01_03560;product=ABC transporter ATP-binding protein/permease;protein_id=MCE2618359.1;transl_table=11 JAJSBG010000007.1 Genbank gene 62916 64664 . + . ID=gene-LVR01_03565;Name=LVR01_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03565 JAJSBG010000007.1 Protein Homology CDS 62916 64664 . + 0 ID=cds-MCE2618360.1;Parent=gene-LVR01_03565;Dbxref=NCBI_GP:MCE2618360.1;Name=MCE2618360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828810.1;locus_tag=LVR01_03565;product=ABC transporter ATP-binding protein/permease;protein_id=MCE2618360.1;transl_table=11 JAJSBG010000007.1 Genbank gene 65056 66315 . + . ID=gene-LVR01_03570;Name=LVR01_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03570 JAJSBG010000007.1 Protein Homology CDS 65056 66315 . + 0 ID=cds-MCE2618361.1;Parent=gene-LVR01_03570;Dbxref=NCBI_GP:MCE2618361.1;Name=MCE2618361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397889.1;locus_tag=LVR01_03570;product=TRZ/ATZ family protein;protein_id=MCE2618361.1;transl_table=11 JAJSBG010000007.1 cmsearch sequence_feature 66391 66526 . + . ID=id-JAJSBG010000007.1:66391..66526;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAJSBG010000007.1 Genbank gene 66565 67065 . + . ID=gene-LVR01_03575;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LVR01_03575 JAJSBG010000007.1 Protein Homology CDS 66565 67065 . + 0 ID=cds-MCE2618362.1;Parent=gene-LVR01_03575;Dbxref=NCBI_GP:MCE2618362.1;Name=MCE2618362.1;gbkey=CDS;gene=rplJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=LVR01_03575;product=50S ribosomal protein L10;protein_id=MCE2618362.1;transl_table=11 JAJSBG010000007.1 Genbank gene 67138 67506 . + . ID=gene-LVR01_03580;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LVR01_03580 JAJSBG010000007.1 Protein Homology CDS 67138 67506 . + 0 ID=cds-MCE2618363.1;Parent=gene-LVR01_03580;Dbxref=NCBI_GP:MCE2618363.1;Name=MCE2618363.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=LVR01_03580;product=50S ribosomal protein L7/L12;protein_id=MCE2618363.1;transl_table=11 ##sequence-region JAJSBG010000080.1 1 2118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000080.1 Genbank region 1 2118 . + . ID=JAJSBG010000080.1:1..2118;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000080.1 Genbank pseudogene 143 323 . - . ID=gene-LVR01_11120;Name=LVR01_11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11120;pseudo=true JAJSBG010000080.1 Protein Homology CDS 143 323 . - 0 ID=cds-LVR01_11120;Parent=gene-LVR01_11120;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603326.1;locus_tag=LVR01_11120;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000080.1 Genbank gene 527 1873 . + . ID=gene-LVR01_11125;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=LVR01_11125 JAJSBG010000080.1 Protein Homology CDS 527 1873 . + 0 ID=cds-MCE2619708.1;Parent=gene-LVR01_11125;Dbxref=NCBI_GP:MCE2619708.1;Name=MCE2619708.1;gbkey=CDS;gene=gdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999806.1;locus_tag=LVR01_11125;product=NADP-specific glutamate dehydrogenase;protein_id=MCE2619708.1;transl_table=11 ##sequence-region JAJSBG010000081.1 1 1964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000081.1 Genbank region 1 1964 . + . ID=JAJSBG010000081.1:1..1964;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000081.1 Genbank gene 134 1867 . + . ID=gene-LVR01_11130;Name=LVR01_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11130 JAJSBG010000081.1 Protein Homology CDS 134 1867 . + 0 ID=cds-MCE2619709.1;Parent=gene-LVR01_11130;Dbxref=NCBI_GP:MCE2619709.1;Name=MCE2619709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399281.1;locus_tag=LVR01_11130;product=IS1634 family transposase;protein_id=MCE2619709.1;transl_table=11 ##sequence-region JAJSBG010000082.1 1 1838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000082.1 Genbank region 1 1838 . + . ID=JAJSBG010000082.1:1..1838;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000082.1 Genbank gene 284 1477 . - . ID=gene-LVR01_11135;Name=LVR01_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11135 JAJSBG010000082.1 Protein Homology CDS 284 1477 . - 0 ID=cds-MCE2619710.1;Parent=gene-LVR01_11135;Dbxref=NCBI_GP:MCE2619710.1;Name=MCE2619710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008293041.1;locus_tag=LVR01_11135;product=O-antigen ligase family protein;protein_id=MCE2619710.1;transl_table=11 ##sequence-region JAJSBG010000083.1 1 1716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000083.1 Genbank region 1 1716 . + . ID=JAJSBG010000083.1:1..1716;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000083.1 Genbank gene 248 1510 . - . ID=gene-LVR01_11140;Name=LVR01_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11140 JAJSBG010000083.1 Protein Homology CDS 248 1510 . - 0 ID=cds-MCE2619711.1;Parent=gene-LVR01_11140;Dbxref=NCBI_GP:MCE2619711.1;Name=MCE2619711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075801.1;locus_tag=LVR01_11140;product=divalent metal cation transporter;protein_id=MCE2619711.1;transl_table=11 ##sequence-region JAJSBG010000084.1 1 1636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000084.1 Genbank region 1 1636 . + . ID=JAJSBG010000084.1:1..1636;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000084.1 Genbank pseudogene 1 947 . - . ID=gene-LVR01_11145;Name=LVR01_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11145;pseudo=true JAJSBG010000084.1 Protein Homology CDS 1 947 . - 0 ID=cds-LVR01_11145;Parent=gene-LVR01_11145;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436461.1;locus_tag=LVR01_11145;product=transposase;pseudo=true;transl_table=11 JAJSBG010000084.1 Genbank gene 997 1254 . - . ID=gene-LVR01_11150;Name=LVR01_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11150 JAJSBG010000084.1 Protein Homology CDS 997 1254 . - 0 ID=cds-MCE2619712.1;Parent=gene-LVR01_11150;Dbxref=NCBI_GP:MCE2619712.1;Name=MCE2619712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=LVR01_11150;product=hypothetical protein;protein_id=MCE2619712.1;transl_table=11 JAJSBG010000084.1 Genbank gene 1331 1534 . - . ID=gene-LVR01_11155;Name=LVR01_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11155 JAJSBG010000084.1 Protein Homology CDS 1331 1534 . - 0 ID=cds-MCE2619713.1;Parent=gene-LVR01_11155;Dbxref=NCBI_GP:MCE2619713.1;Name=MCE2619713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LVR01_11155;product=tyrosine-type recombinase/integrase;protein_id=MCE2619713.1;transl_table=11 ##sequence-region JAJSBG010000085.1 1 1609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000085.1 Genbank region 1 1609 . + . ID=JAJSBG010000085.1:1..1609;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000085.1 Genbank pseudogene 163 270 . + . ID=gene-LVR01_11160;Name=LVR01_11160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11160;pseudo=true JAJSBG010000085.1 Protein Homology CDS 163 270 . + 0 ID=cds-LVR01_11160;Parent=gene-LVR01_11160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LVR01_11160;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 JAJSBG010000085.1 Genbank gene 303 1130 . + . ID=gene-LVR01_11165;Name=LVR01_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11165 JAJSBG010000085.1 Protein Homology CDS 303 1130 . + 0 ID=cds-MCE2619714.1;Parent=gene-LVR01_11165;Dbxref=NCBI_GP:MCE2619714.1;Name=MCE2619714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863024.1;locus_tag=LVR01_11165;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2619714.1;transl_table=11 JAJSBG010000085.1 Genbank pseudogene 1180 1514 . + . ID=gene-LVR01_11170;Name=LVR01_11170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11170;pseudo=true JAJSBG010000085.1 Protein Homology CDS 1180 1514 . + 0 ID=cds-LVR01_11170;Parent=gene-LVR01_11170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290646.1;locus_tag=LVR01_11170;product=1-alkyl-2-acetylglycerophosphocholine esterase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000086.1 1 1427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000086.1 Genbank region 1 1427 . + . ID=JAJSBG010000086.1:1..1427;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000086.1 Genbank pseudogene 1 405 . - . ID=gene-LVR01_11175;Name=LVR01_11175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11175;pseudo=true JAJSBG010000086.1 Protein Homology CDS 1 405 . - 0 ID=cds-LVR01_11175;Parent=gene-LVR01_11175;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=LVR01_11175;product=IS630 transposase-related protein;pseudo=true;transl_table=11 JAJSBG010000086.1 Genbank pseudogene 518 1427 . + . ID=gene-LVR01_11180;Name=LVR01_11180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11180;pseudo=true JAJSBG010000086.1 Protein Homology CDS 518 1427 . + 0 ID=cds-LVR01_11180;Parent=gene-LVR01_11180;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=LVR01_11180;product=PD-(D/E)XK nuclease family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000087.1 1 1294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000087.1 Genbank region 1 1294 . + . ID=JAJSBG010000087.1:1..1294;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000087.1 Genbank gene 1 739 . - . ID=gene-LVR01_11185;Name=LVR01_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11185;partial=true;start_range=.,1 JAJSBG010000087.1 Protein Homology CDS 1 739 . - 0 ID=cds-MCE2619715.1;Parent=gene-LVR01_11185;Dbxref=NCBI_GP:MCE2619715.1;Name=MCE2619715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_068988785.1;locus_tag=LVR01_11185;partial=true;product=transposase;protein_id=MCE2619715.1;start_range=.,1;transl_table=11 JAJSBG010000087.1 Genbank gene 693 887 . - . ID=gene-LVR01_11190;Name=LVR01_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11190 JAJSBG010000087.1 Protein Homology CDS 693 887 . - 0 ID=cds-MCE2619716.1;Parent=gene-LVR01_11190;Dbxref=NCBI_GP:MCE2619716.1;Name=MCE2619716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691852.1;locus_tag=LVR01_11190;product=transposase;protein_id=MCE2619716.1;transl_table=11 JAJSBG010000087.1 Genbank pseudogene 1057 1294 . - . ID=gene-LVR01_11195;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=LVR01_11195;pseudo=true JAJSBG010000087.1 Protein Homology CDS 1057 1294 . - 1 ID=cds-LVR01_11195;Parent=gene-LVR01_11195;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=LVR01_11195;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000088.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000088.1 Genbank region 1 1221 . + . ID=JAJSBG010000088.1:1..1221;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000088.1 Genbank gene 316 1080 . - . ID=gene-LVR01_11200;Name=LVR01_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11200 JAJSBG010000088.1 Protein Homology CDS 316 1080 . - 0 ID=cds-MCE2619717.1;Parent=gene-LVR01_11200;Dbxref=NCBI_GP:MCE2619717.1;Name=MCE2619717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=LVR01_11200;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=MCE2619717.1;transl_table=11 JAJSBG010000088.1 Genbank gene 1081 1221 . - . ID=gene-LVR01_11205;Name=LVR01_11205;end_range=1221,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11205;partial=true JAJSBG010000088.1 Protein Homology CDS 1081 1221 . - 0 ID=cds-MCE2619718.1;Parent=gene-LVR01_11205;Dbxref=NCBI_GP:MCE2619718.1;Name=MCE2619718.1;end_range=1221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836217.1;locus_tag=LVR01_11205;partial=true;product=S24 family peptidase;protein_id=MCE2619718.1;transl_table=11 ##sequence-region JAJSBG010000089.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000089.1 Genbank region 1 1118 . + . ID=JAJSBG010000089.1:1..1118;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000089.1 Genbank gene 18 509 . + . ID=gene-LVR01_11210;Name=LVR01_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11210 JAJSBG010000089.1 Protein Homology CDS 18 509 . + 0 ID=cds-MCE2619719.1;Parent=gene-LVR01_11210;Dbxref=NCBI_GP:MCE2619719.1;Name=MCE2619719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022916.1;locus_tag=LVR01_11210;product=MazG-like family protein;protein_id=MCE2619719.1;transl_table=11 JAJSBG010000089.1 Genbank gene 506 928 . + . ID=gene-LVR01_11215;Name=LVR01_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11215 JAJSBG010000089.1 Protein Homology CDS 506 928 . + 0 ID=cds-MCE2619720.1;Parent=gene-LVR01_11215;Dbxref=NCBI_GP:MCE2619720.1;Name=MCE2619720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187974.1;locus_tag=LVR01_11215;product=YopX family protein;protein_id=MCE2619720.1;transl_table=11 JAJSBG010000089.1 Genbank gene 925 1118 . + . ID=gene-LVR01_11220;Name=LVR01_11220;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11220;partial=true JAJSBG010000089.1 Protein Homology CDS 925 1118 . + 0 ID=cds-MCE2619721.1;Parent=gene-LVR01_11220;Dbxref=NCBI_GP:MCE2619721.1;Name=MCE2619721.1;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067623.1;locus_tag=LVR01_11220;partial=true;product=DUF3310 domain-containing protein;protein_id=MCE2619721.1;transl_table=11 ##sequence-region JAJSBG010000008.1 1 55329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000008.1 Genbank region 1 55329 . + . ID=JAJSBG010000008.1:1..55329;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000008.1 Genbank pseudogene 40 224 . - . ID=gene-LVR01_03585;Name=LVR01_03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03585;pseudo=true JAJSBG010000008.1 Protein Homology CDS 40 224 . - 0 ID=cds-LVR01_03585;Parent=gene-LVR01_03585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=LVR01_03585;product=hypothetical protein;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 407 1198 . + . ID=gene-LVR01_03590;Name=LVR01_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03590 JAJSBG010000008.1 Protein Homology CDS 407 1198 . + 0 ID=cds-MCE2618364.1;Parent=gene-LVR01_03590;Dbxref=NCBI_GP:MCE2618364.1;Name=MCE2618364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153601.1;locus_tag=LVR01_03590;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2618364.1;transl_table=11 JAJSBG010000008.1 Genbank gene 1198 2016 . + . ID=gene-LVR01_03595;Name=LVR01_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03595 JAJSBG010000008.1 Protein Homology CDS 1198 2016 . + 0 ID=cds-MCE2618365.1;Parent=gene-LVR01_03595;Dbxref=NCBI_GP:MCE2618365.1;Name=MCE2618365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465979.1;locus_tag=LVR01_03595;product=Cof-type HAD-IIB family hydrolase;protein_id=MCE2618365.1;transl_table=11 JAJSBG010000008.1 Genbank gene 2020 3309 . + . ID=gene-LVR01_03600;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LVR01_03600 JAJSBG010000008.1 Protein Homology CDS 2020 3309 . + 0 ID=cds-MCE2618366.1;Parent=gene-LVR01_03600;Dbxref=NCBI_GP:MCE2618366.1;Name=MCE2618366.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522312.1;locus_tag=LVR01_03600;product=signal recognition particle-docking protein FtsY;protein_id=MCE2618366.1;transl_table=11 JAJSBG010000008.1 Genbank gene 3354 4841 . - . ID=gene-LVR01_03605;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LVR01_03605 JAJSBG010000008.1 Protein Homology CDS 3354 4841 . - 0 ID=cds-MCE2618367.1;Parent=gene-LVR01_03605;Dbxref=NCBI_GP:MCE2618367.1;Name=MCE2618367.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096131.1;locus_tag=LVR01_03605;product=glucose-6-phosphate dehydrogenase;protein_id=MCE2618367.1;transl_table=11 JAJSBG010000008.1 Genbank gene 4992 5732 . - . ID=gene-LVR01_03610;Name=LVR01_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03610 JAJSBG010000008.1 Protein Homology CDS 4992 5732 . - 0 ID=cds-MCE2618368.1;Parent=gene-LVR01_03610;Dbxref=NCBI_GP:MCE2618368.1;Name=MCE2618368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=LVR01_03610;product=amino acid ABC transporter ATP-binding protein;protein_id=MCE2618368.1;transl_table=11 JAJSBG010000008.1 Genbank gene 5732 7897 . - . ID=gene-LVR01_03615;Name=LVR01_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03615 JAJSBG010000008.1 Protein Homology CDS 5732 7897 . - 0 ID=cds-MCE2618369.1;Parent=gene-LVR01_03615;Dbxref=NCBI_GP:MCE2618369.1;Name=MCE2618369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522057.1;locus_tag=LVR01_03615;product=ABC transporter substrate-binding protein/permease;protein_id=MCE2618369.1;transl_table=11 JAJSBG010000008.1 Genbank pseudogene 8070 9061 . + . ID=gene-LVR01_03620;Name=LVR01_03620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03620;pseudo=true JAJSBG010000008.1 Protein Homology CDS 8070 9061 . + 0 ID=cds-LVR01_03620;Parent=gene-LVR01_03620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000792120.1;locus_tag=LVR01_03620;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 9138 11126 . + . ID=gene-LVR01_03625;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LVR01_03625 JAJSBG010000008.1 Protein Homology CDS 9138 11126 . + 0 ID=cds-MCE2618370.1;Parent=gene-LVR01_03625;Dbxref=NCBI_GP:MCE2618370.1;Name=MCE2618370.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254186.1;locus_tag=LVR01_03625;product=excinuclease ABC subunit B;protein_id=MCE2618370.1;transl_table=11 JAJSBG010000008.1 Genbank gene 11136 11699 . + . ID=gene-LVR01_03630;Name=LVR01_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03630 JAJSBG010000008.1 Protein Homology CDS 11136 11699 . + 0 ID=cds-MCE2618371.1;Parent=gene-LVR01_03630;Dbxref=NCBI_GP:MCE2618371.1;Name=MCE2618371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639844.1;locus_tag=LVR01_03630;product=GNAT family N-acetyltransferase;protein_id=MCE2618371.1;transl_table=11 JAJSBG010000008.1 Genbank gene 11665 12153 . + . ID=gene-LVR01_03635;Name=LVR01_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03635 JAJSBG010000008.1 Protein Homology CDS 11665 12153 . + 0 ID=cds-MCE2618372.1;Parent=gene-LVR01_03635;Dbxref=NCBI_GP:MCE2618372.1;Name=MCE2618372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254187.1;locus_tag=LVR01_03635;product=GNAT family N-acetyltransferase;protein_id=MCE2618372.1;transl_table=11 JAJSBG010000008.1 Genbank gene 12226 12693 . + . ID=gene-LVR01_03640;Name=LVR01_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03640 JAJSBG010000008.1 Protein Homology CDS 12226 12693 . + 0 ID=cds-MCE2618373.1;Parent=gene-LVR01_03640;Dbxref=NCBI_GP:MCE2618373.1;Name=MCE2618373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085289.1;locus_tag=LVR01_03640;product=8-oxo-dGTP diphosphatase;protein_id=MCE2618373.1;transl_table=11 JAJSBG010000008.1 Genbank pseudogene 12690 12758 . - . ID=gene-LVR01_03645;Name=LVR01_03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03645;pseudo=true JAJSBG010000008.1 Protein Homology CDS 12690 12758 . - 0 ID=cds-LVR01_03645;Parent=gene-LVR01_03645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522046.1;locus_tag=LVR01_03645;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 12903 13877 . + . ID=gene-LVR01_03650;Name=LVR01_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03650 JAJSBG010000008.1 Protein Homology CDS 12903 13877 . + 0 ID=cds-MCE2618374.1;Parent=gene-LVR01_03650;Dbxref=NCBI_GP:MCE2618374.1;Name=MCE2618374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002994809.1;locus_tag=LVR01_03650;product=LacI family transcriptional regulator;protein_id=MCE2618374.1;transl_table=11 JAJSBG010000008.1 Genbank pseudogene 13877 14787 . + . ID=gene-LVR01_03655;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=LVR01_03655;pseudo=true JAJSBG010000008.1 Protein Homology CDS 13877 14787 . + 0 ID=cds-LVR01_03655;Parent=gene-LVR01_03655;Note=frameshifted;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003051898.1;locus_tag=LVR01_03655;product=ribokinase;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 14762 15160 . + . ID=gene-LVR01_03660;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=LVR01_03660 JAJSBG010000008.1 Protein Homology CDS 14762 15160 . + 0 ID=cds-MCE2618375.1;Parent=gene-LVR01_03660;Dbxref=NCBI_GP:MCE2618375.1;Name=MCE2618375.1;gbkey=CDS;gene=rbsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759833.1;locus_tag=LVR01_03660;product=D-ribose pyranase;protein_id=MCE2618375.1;transl_table=11 JAJSBG010000008.1 Genbank gene 15174 16652 . + . ID=gene-LVR01_03665;Name=LVR01_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03665 JAJSBG010000008.1 Protein Homology CDS 15174 16652 . + 0 ID=cds-MCE2618376.1;Parent=gene-LVR01_03665;Dbxref=NCBI_GP:MCE2618376.1;Name=MCE2618376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767714.1;locus_tag=LVR01_03665;product=sugar ABC transporter ATP-binding protein;protein_id=MCE2618376.1;transl_table=11 JAJSBG010000008.1 Genbank gene 16654 17598 . + . ID=gene-LVR01_03670;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=LVR01_03670 JAJSBG010000008.1 Protein Homology CDS 16654 17598 . + 0 ID=cds-MCE2618377.1;Parent=gene-LVR01_03670;Dbxref=NCBI_GP:MCE2618377.1;Name=MCE2618377.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248623.1;locus_tag=LVR01_03670;product=ribose ABC transporter permease;protein_id=MCE2618377.1;transl_table=11 JAJSBG010000008.1 Genbank gene 17702 18667 . + . ID=gene-LVR01_03675;Name=LVR01_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03675 JAJSBG010000008.1 Protein Homology CDS 17702 18667 . + 0 ID=cds-MCE2618378.1;Parent=gene-LVR01_03675;Dbxref=NCBI_GP:MCE2618378.1;Name=MCE2618378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057894.1;locus_tag=LVR01_03675;product=substrate-binding domain-containing protein;protein_id=MCE2618378.1;transl_table=11 JAJSBG010000008.1 Genbank pseudogene 18745 18885 . + . ID=gene-LVR01_03680;Name=LVR01_03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03680;pseudo=true JAJSBG010000008.1 Protein Homology CDS 18745 18885 . + 0 ID=cds-LVR01_03680;Parent=gene-LVR01_03680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085290.1;locus_tag=LVR01_03680;product=NUDIX hydrolase;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 18882 19397 . - . ID=gene-LVR01_03685;Name=LVR01_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03685 JAJSBG010000008.1 Protein Homology CDS 18882 19397 . - 0 ID=cds-MCE2618379.1;Parent=gene-LVR01_03685;Dbxref=NCBI_GP:MCE2618379.1;Name=MCE2618379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522046.1;locus_tag=LVR01_03685;product=transcription repressor NadR;protein_id=MCE2618379.1;transl_table=11 JAJSBG010000008.1 Genbank gene 19409 19936 . - . ID=gene-LVR01_03690;Name=LVR01_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03690 JAJSBG010000008.1 Protein Homology CDS 19409 19936 . - 0 ID=cds-MCE2618380.1;Parent=gene-LVR01_03690;Dbxref=NCBI_GP:MCE2618380.1;Name=MCE2618380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397045.1;locus_tag=LVR01_03690;product=ECF transporter S component;protein_id=MCE2618380.1;transl_table=11 JAJSBG010000008.1 Genbank gene 20112 20675 . - . ID=gene-LVR01_03695;Name=LVR01_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03695 JAJSBG010000008.1 Protein Homology CDS 20112 20675 . - 0 ID=cds-MCE2618381.1;Parent=gene-LVR01_03695;Dbxref=NCBI_GP:MCE2618381.1;Name=MCE2618381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747407.1;locus_tag=LVR01_03695;product=ECF transporter S component;protein_id=MCE2618381.1;transl_table=11 JAJSBG010000008.1 Genbank gene 20659 21210 . - . ID=gene-LVR01_03700;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=LVR01_03700 JAJSBG010000008.1 Protein Homology CDS 20659 21210 . - 0 ID=cds-MCE2618382.1;Parent=gene-LVR01_03700;Dbxref=NCBI_GP:MCE2618382.1;Name=MCE2618382.1;gbkey=CDS;gene=coaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284124.1;locus_tag=LVR01_03700;product=phosphopantothenoylcysteine decarboxylase;protein_id=MCE2618382.1;transl_table=11 JAJSBG010000008.1 Genbank gene 21222 21911 . - . ID=gene-LVR01_03705;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=LVR01_03705 JAJSBG010000008.1 Protein Homology CDS 21222 21911 . - 0 ID=cds-MCE2618383.1;Parent=gene-LVR01_03705;Dbxref=NCBI_GP:MCE2618383.1;Name=MCE2618383.1;gbkey=CDS;gene=coaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000699493.1;locus_tag=LVR01_03705;product=phosphopantothenate--cysteine ligase;protein_id=MCE2618383.1;transl_table=11 JAJSBG010000008.1 Genbank gene 22141 23811 . + . ID=gene-LVR01_03710;Name=LVR01_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03710 JAJSBG010000008.1 Protein Homology CDS 22141 23811 . + 0 ID=cds-MCE2618384.1;Parent=gene-LVR01_03710;Dbxref=NCBI_GP:MCE2618384.1;Name=MCE2618384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803354.1;locus_tag=LVR01_03710;product=formate--tetrahydrofolate ligase;protein_id=MCE2618384.1;transl_table=11 JAJSBG010000008.1 Genbank gene 24035 24181 . + . ID=gene-LVR01_03715;Name=LVR01_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03715 JAJSBG010000008.1 Protein Homology CDS 24035 24181 . + 0 ID=cds-MCE2618385.1;Parent=gene-LVR01_03715;Dbxref=NCBI_GP:MCE2618385.1;Name=MCE2618385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674100.1;locus_tag=LVR01_03715;product=hypothetical protein;protein_id=MCE2618385.1;transl_table=11 JAJSBG010000008.1 Genbank gene 24227 25402 . + . ID=gene-LVR01_03720;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LVR01_03720 JAJSBG010000008.1 Protein Homology CDS 24227 25402 . + 0 ID=cds-MCE2618386.1;Parent=gene-LVR01_03720;Dbxref=NCBI_GP:MCE2618386.1;Name=MCE2618386.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886125.1;locus_tag=LVR01_03720;product=A/G-specific adenine glycosylase;protein_id=MCE2618386.1;transl_table=11 JAJSBG010000008.1 Genbank gene 25458 26162 . + . ID=gene-LVR01_03725;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=LVR01_03725 JAJSBG010000008.1 Protein Homology CDS 25458 26162 . + 0 ID=cds-MCE2618387.1;Parent=gene-LVR01_03725;Dbxref=NCBI_GP:MCE2618387.1;Name=MCE2618387.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722069.1;locus_tag=LVR01_03725;product=response regulator YycF;protein_id=MCE2618387.1;transl_table=11 JAJSBG010000008.1 Genbank gene 26155 27504 . + . ID=gene-LVR01_03730;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=LVR01_03730 JAJSBG010000008.1 Protein Homology CDS 26155 27504 . + 0 ID=cds-MCE2618388.1;Parent=gene-LVR01_03730;Dbxref=NCBI_GP:MCE2618388.1;Name=MCE2618388.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886221.1;locus_tag=LVR01_03730;product=cell wall metabolism sensor histidine kinase VicK;protein_id=MCE2618388.1;transl_table=11 JAJSBG010000008.1 Genbank gene 27506 28315 . + . ID=gene-LVR01_03735;Name=LVR01_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03735 JAJSBG010000008.1 Protein Homology CDS 27506 28315 . + 0 ID=cds-MCE2618389.1;Parent=gene-LVR01_03735;Dbxref=NCBI_GP:MCE2618389.1;Name=MCE2618389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861619.1;locus_tag=LVR01_03735;product=MBL fold metallo-hydrolase;protein_id=MCE2618389.1;transl_table=11 JAJSBG010000008.1 Genbank gene 28406 28648 . + . ID=gene-LVR01_03740;Name=LVR01_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03740 JAJSBG010000008.1 Protein Homology CDS 28406 28648 . + 0 ID=cds-MCE2618390.1;Parent=gene-LVR01_03740;Dbxref=NCBI_GP:MCE2618390.1;Name=MCE2618390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001853822.1;locus_tag=LVR01_03740;product=DUF6290 family protein;protein_id=MCE2618390.1;transl_table=11 JAJSBG010000008.1 Genbank gene 28650 28904 . + . ID=gene-LVR01_03745;Name=LVR01_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03745 JAJSBG010000008.1 Protein Homology CDS 28650 28904 . + 0 ID=cds-MCE2618391.1;Parent=gene-LVR01_03745;Dbxref=NCBI_GP:MCE2618391.1;Name=MCE2618391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809704.1;locus_tag=LVR01_03745;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCE2618391.1;transl_table=11 JAJSBG010000008.1 Genbank gene 28980 30866 . + . ID=gene-LVR01_03750;Name=LVR01_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03750 JAJSBG010000008.1 Protein Homology CDS 28980 30866 . + 0 ID=cds-MCE2618392.1;Parent=gene-LVR01_03750;Dbxref=NCBI_GP:MCE2618392.1;Name=MCE2618392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150981.1;locus_tag=LVR01_03750;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=MCE2618392.1;transl_table=11 JAJSBG010000008.1 Genbank gene 31031 34285 . + . ID=gene-LVR01_03755;Name=LVR01_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03755 JAJSBG010000008.1 Protein Homology CDS 31031 34285 . + 0 ID=cds-MCE2618393.1;Parent=gene-LVR01_03755;Dbxref=NCBI_GP:MCE2618393.1;Name=MCE2618393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001143847.1;locus_tag=LVR01_03755;product=DEAD/DEAH box helicase family protein;protein_id=MCE2618393.1;transl_table=11 JAJSBG010000008.1 Genbank gene 34635 35603 . - . ID=gene-LVR01_03760;Name=LVR01_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03760 JAJSBG010000008.1 Protein Homology CDS 34635 35603 . - 0 ID=cds-MCE2618394.1;Parent=gene-LVR01_03760;Dbxref=NCBI_GP:MCE2618394.1;Name=MCE2618394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204723.1;locus_tag=LVR01_03760;product=L-lactate dehydrogenase;protein_id=MCE2618394.1;transl_table=11 JAJSBG010000008.1 Genbank gene 35797 38265 . + . ID=gene-LVR01_03765;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LVR01_03765 JAJSBG010000008.1 Protein Homology CDS 35797 38265 . + 0 ID=cds-MCE2618395.1;Parent=gene-LVR01_03765;Dbxref=NCBI_GP:MCE2618395.1;Name=MCE2618395.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253434.1;locus_tag=LVR01_03765;product=DNA gyrase subunit A;protein_id=MCE2618395.1;transl_table=11 JAJSBG010000008.1 Genbank gene 38265 39008 . + . ID=gene-LVR01_03770;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=LVR01_03770 JAJSBG010000008.1 Protein Homology CDS 38265 39008 . + 0 ID=cds-MCE2618396.1;Parent=gene-LVR01_03770;Dbxref=NCBI_GP:MCE2618396.1;Name=MCE2618396.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078846.1;locus_tag=LVR01_03770;product=sortase SrtA;protein_id=MCE2618396.1;transl_table=11 JAJSBG010000008.1 Genbank pseudogene 39168 39449 . + . ID=gene-LVR01_03775;Name=LVR01_03775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_03775;pseudo=true JAJSBG010000008.1 Protein Homology CDS 39168 39449 . + 0 ID=cds-LVR01_03775;Parent=gene-LVR01_03775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465852.1;locus_tag=LVR01_03775;product=PLP-dependent transferase;pseudo=true;transl_table=11 JAJSBG010000008.1 Genbank gene 39545 40819 . + . ID=gene-LVR01_03780;Name=LVR01_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03780 JAJSBG010000008.1 Protein Homology CDS 39545 40819 . + 0 ID=cds-MCE2618397.1;Parent=gene-LVR01_03780;Dbxref=NCBI_GP:MCE2618397.1;Name=MCE2618397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002592.1;locus_tag=LVR01_03780;product=DUF2130 domain-containing protein;protein_id=MCE2618397.1;transl_table=11 JAJSBG010000008.1 Genbank gene 40829 41707 . + . ID=gene-LVR01_03785;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LVR01_03785 JAJSBG010000008.1 Protein Homology CDS 40829 41707 . + 0 ID=cds-MCE2618398.1;Parent=gene-LVR01_03785;Dbxref=NCBI_GP:MCE2618398.1;Name=MCE2618398.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013269.1;locus_tag=LVR01_03785;product=tRNA pseudouridine(55) synthase TruB;protein_id=MCE2618398.1;transl_table=11 JAJSBG010000008.1 Genbank gene 42074 42376 . + . ID=gene-LVR01_03790;Name=LVR01_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03790 JAJSBG010000008.1 Protein Homology CDS 42074 42376 . + 0 ID=cds-MCE2618399.1;Parent=gene-LVR01_03790;Dbxref=NCBI_GP:MCE2618399.1;Name=MCE2618399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985087.1;locus_tag=LVR01_03790;product=bacteriocin immunity protein;protein_id=MCE2618399.1;transl_table=11 JAJSBG010000008.1 Genbank gene 42484 43122 . + . ID=gene-LVR01_03795;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LVR01_03795 JAJSBG010000008.1 Protein Homology CDS 42484 43122 . + 0 ID=cds-MCE2618400.1;Parent=gene-LVR01_03795;Dbxref=NCBI_GP:MCE2618400.1;Name=MCE2618400.1;gbkey=CDS;gene=udk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181378.1;locus_tag=LVR01_03795;product=uridine kinase;protein_id=MCE2618400.1;transl_table=11 JAJSBG010000008.1 Genbank gene 43250 44590 . + . ID=gene-LVR01_03800;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LVR01_03800 JAJSBG010000008.1 Protein Homology CDS 43250 44590 . + 0 ID=cds-MCE2618401.1;Parent=gene-LVR01_03800;Dbxref=NCBI_GP:MCE2618401.1;Name=MCE2618401.1;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417449.1;locus_tag=LVR01_03800;product=exodeoxyribonuclease VII large subunit;protein_id=MCE2618401.1;transl_table=11 JAJSBG010000008.1 Genbank gene 44568 44780 . + . ID=gene-LVR01_03805;Name=LVR01_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03805 JAJSBG010000008.1 Protein Homology CDS 44568 44780 . + 0 ID=cds-MCE2618402.1;Parent=gene-LVR01_03805;Dbxref=NCBI_GP:MCE2618402.1;Name=MCE2618402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809086.1;locus_tag=LVR01_03805;product=exodeoxyribonuclease VII small subunit;protein_id=MCE2618402.1;transl_table=11 JAJSBG010000008.1 Genbank gene 44777 45652 . + . ID=gene-LVR01_03810;Name=LVR01_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03810 JAJSBG010000008.1 Protein Homology CDS 44777 45652 . + 0 ID=cds-MCE2618403.1;Parent=gene-LVR01_03810;Dbxref=NCBI_GP:MCE2618403.1;Name=MCE2618403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743807.1;locus_tag=LVR01_03810;product=polyprenyl synthetase family protein;protein_id=MCE2618403.1;transl_table=11 JAJSBG010000008.1 Genbank gene 45645 46460 . + . ID=gene-LVR01_03815;Name=LVR01_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03815 JAJSBG010000008.1 Protein Homology CDS 45645 46460 . + 0 ID=cds-MCE2618404.1;Parent=gene-LVR01_03815;Dbxref=NCBI_GP:MCE2618404.1;Name=MCE2618404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041085.1;locus_tag=LVR01_03815;product=TlyA family RNA methyltransferase;protein_id=MCE2618404.1;transl_table=11 JAJSBG010000008.1 Genbank gene 46453 46884 . + . ID=gene-LVR01_03820;Name=LVR01_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03820 JAJSBG010000008.1 Protein Homology CDS 46453 46884 . + 0 ID=cds-MCE2618405.1;Parent=gene-LVR01_03820;Dbxref=NCBI_GP:MCE2618405.1;Name=MCE2618405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034407.1;locus_tag=LVR01_03820;product=arginine repressor;protein_id=MCE2618405.1;transl_table=11 JAJSBG010000008.1 Genbank gene 46891 48558 . + . ID=gene-LVR01_03825;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LVR01_03825 JAJSBG010000008.1 Protein Homology CDS 46891 48558 . + 0 ID=cds-MCE2618406.1;Parent=gene-LVR01_03825;Dbxref=NCBI_GP:MCE2618406.1;Name=MCE2618406.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399602.1;locus_tag=LVR01_03825;product=DNA repair protein RecN;protein_id=MCE2618406.1;transl_table=11 JAJSBG010000008.1 Genbank gene 48560 49288 . + . ID=gene-LVR01_03830;Name=LVR01_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03830 JAJSBG010000008.1 Protein Homology CDS 48560 49288 . + 0 ID=cds-MCE2618407.1;Parent=gene-LVR01_03830;Dbxref=NCBI_GP:MCE2618407.1;Name=MCE2618407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000133310.1;locus_tag=LVR01_03830;product=serine/threonine protein phosphatase;protein_id=MCE2618407.1;transl_table=11 JAJSBG010000008.1 Genbank gene 49367 51190 . + . ID=gene-LVR01_03835;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LVR01_03835 JAJSBG010000008.1 Protein Homology CDS 49367 51190 . + 0 ID=cds-MCE2618408.1;Parent=gene-LVR01_03835;Dbxref=NCBI_GP:MCE2618408.1;Name=MCE2618408.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001047203.1;locus_tag=LVR01_03835;product=translation elongation factor 4;protein_id=MCE2618408.1;transl_table=11 JAJSBG010000008.1 Genbank gene 51528 52439 . + . ID=gene-LVR01_03840;Name=LVR01_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03840 JAJSBG010000008.1 Protein Homology CDS 51528 52439 . + 0 ID=cds-MCE2618409.1;Parent=gene-LVR01_03840;Dbxref=NCBI_GP:MCE2618409.1;Name=MCE2618409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218323.1;locus_tag=LVR01_03840;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCE2618409.1;transl_table=11 JAJSBG010000008.1 Genbank gene 53166 55329 . + . ID=gene-LVR01_03845;Name=LVR01_03845;end_range=55329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03845;partial=true JAJSBG010000008.1 Protein Homology CDS 53166 55329 . + 0 ID=cds-MCE2618410.1;Parent=gene-LVR01_03845;Dbxref=NCBI_GP:MCE2618410.1;Name=MCE2618410.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;end_range=55329,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LVR01_03845;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=MCE2618410.1;transl_table=11 ##sequence-region JAJSBG010000090.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000090.1 Genbank region 1 1113 . + . ID=JAJSBG010000090.1:1..1113;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000090.1 Genbank gene 271 1113 . - . ID=gene-LVR01_11225;Name=LVR01_11225;end_range=1113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11225;partial=true JAJSBG010000090.1 Protein Homology CDS 271 1113 . - 0 ID=cds-MCE2619722.1;Parent=gene-LVR01_11225;Dbxref=NCBI_GP:MCE2619722.1;Name=MCE2619722.1;end_range=1113,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040145.1;locus_tag=LVR01_11225;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCE2619722.1;transl_table=11 ##sequence-region JAJSBG010000091.1 1 1087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000091.1 Genbank region 1 1087 . + . ID=JAJSBG010000091.1:1..1087;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000091.1 Genbank pseudogene 1 797 . - . ID=gene-LVR01_11230;Name=LVR01_11230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11230;pseudo=true JAJSBG010000091.1 Protein Homology CDS 1 797 . - 0 ID=cds-LVR01_11230;Parent=gene-LVR01_11230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=LVR01_11230;product=ISNCY family transposase;pseudo=true;transl_table=11 JAJSBG010000091.1 Genbank gene 894 965 . + . ID=gene-LVR01_11235;Name=LVR01_11235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11235 JAJSBG010000091.1 tRNAscan-SE tRNA 894 965 . + . ID=rna-LVR01_11235;Parent=gene-LVR01_11235;anticodon=(pos:927..929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11235;product=tRNA-Glu JAJSBG010000091.1 tRNAscan-SE exon 894 965 . + . ID=exon-LVR01_11235-1;Parent=rna-LVR01_11235;anticodon=(pos:927..929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11235;product=tRNA-Glu ##sequence-region JAJSBG010000092.1 1 1066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000092.1 Genbank region 1 1066 . + . ID=JAJSBG010000092.1:1..1066;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000092.1 Genbank pseudogene 1 617 . + . ID=gene-LVR01_11240;Name=LVR01_11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11240;pseudo=true JAJSBG010000092.1 Protein Homology CDS 1 617 . + 1 ID=cds-LVR01_11240;Parent=gene-LVR01_11240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040325.1;locus_tag=LVR01_11240;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 JAJSBG010000092.1 Genbank pseudogene 722 1066 . - . ID=gene-LVR01_11245;Name=LVR01_11245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11245;pseudo=true JAJSBG010000092.1 Protein Homology CDS 722 1066 . - 0 ID=cds-LVR01_11245;Parent=gene-LVR01_11245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=LVR01_11245;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000093.1 1 1017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000093.1 Genbank region 1 1017 . + . ID=JAJSBG010000093.1:1..1017;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000093.1 Genbank pseudogene 1 923 . - . ID=gene-LVR01_11250;Name=LVR01_11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11250;pseudo=true JAJSBG010000093.1 Protein Homology CDS 1 923 . - 0 ID=cds-LVR01_11250;Parent=gene-LVR01_11250;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135354310.1;locus_tag=LVR01_11250;product=G5 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000094.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000094.1 Genbank region 1 957 . + . ID=JAJSBG010000094.1:1..957;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000094.1 Genbank gene 302 496 . + . ID=gene-LVR01_11255;Name=LVR01_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11255 JAJSBG010000094.1 Protein Homology CDS 302 496 . + 0 ID=cds-MCE2619723.1;Parent=gene-LVR01_11255;Dbxref=NCBI_GP:MCE2619723.1;Name=MCE2619723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284915.1;locus_tag=LVR01_11255;product=S24 family peptidase;protein_id=MCE2619723.1;transl_table=11 ##sequence-region JAJSBG010000095.1 1 946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000095.1 Genbank region 1 946 . + . ID=JAJSBG010000095.1:1..946;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000095.1 Genbank gene 1 539 . + . ID=gene-LVR01_11260;Name=LVR01_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11260;partial=true;start_range=.,1 JAJSBG010000095.1 Protein Homology CDS 1 539 . + 2 ID=cds-MCE2619724.1;Parent=gene-LVR01_11260;Dbxref=NCBI_GP:MCE2619724.1;Name=MCE2619724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152639374.1;locus_tag=LVR01_11260;partial=true;product=transposase;protein_id=MCE2619724.1;start_range=.,1;transl_table=11 JAJSBG010000095.1 Genbank pseudogene 538 825 . + . ID=gene-LVR01_11265;Name=LVR01_11265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11265;pseudo=true JAJSBG010000095.1 Protein Homology CDS 538 825 . + 0 ID=cds-LVR01_11265;Parent=gene-LVR01_11265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436304.1;locus_tag=LVR01_11265;product=transposase;pseudo=true;transl_table=11 JAJSBG010000095.1 Genbank gene 814 887 . - . ID=gene-LVR01_11270;Name=LVR01_11270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_11270 JAJSBG010000095.1 tRNAscan-SE tRNA 814 887 . - . ID=rna-LVR01_11270;Parent=gene-LVR01_11270;anticodon=(pos:complement(851..853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11270;product=tRNA-Asn JAJSBG010000095.1 tRNAscan-SE exon 814 887 . - . ID=exon-LVR01_11270-1;Parent=rna-LVR01_11270;anticodon=(pos:complement(851..853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_11270;product=tRNA-Asn ##sequence-region JAJSBG010000096.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000096.1 Genbank region 1 821 . + . ID=JAJSBG010000096.1:1..821;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000096.1 Genbank pseudogene 1 639 . + . ID=gene-LVR01_11275;Name=LVR01_11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11275;pseudo=true JAJSBG010000096.1 Protein Homology CDS 1 639 . + 0 ID=cds-LVR01_11275;Parent=gene-LVR01_11275;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155321.1;locus_tag=LVR01_11275;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region JAJSBG010000097.1 1 787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000097.1 Genbank region 1 787 . + . ID=JAJSBG010000097.1:1..787;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000097.1 Genbank gene 421 576 . - . ID=gene-LVR01_11280;Name=LVR01_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11280 JAJSBG010000097.1 GeneMarkS-2+ CDS 421 576 . - 0 ID=cds-MCE2619725.1;Parent=gene-LVR01_11280;Dbxref=NCBI_GP:MCE2619725.1;Name=MCE2619725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_11280;product=hypothetical protein;protein_id=MCE2619725.1;transl_table=11 JAJSBG010000097.1 Genbank gene 606 787 . - . ID=gene-LVR01_11285;Name=LVR01_11285;end_range=787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11285;partial=true JAJSBG010000097.1 Protein Homology CDS 606 787 . - 2 ID=cds-MCE2619726.1;Parent=gene-LVR01_11285;Dbxref=NCBI_GP:MCE2619726.1;Name=MCE2619726.1;end_range=787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152639374.1;locus_tag=LVR01_11285;partial=true;product=transposase;protein_id=MCE2619726.1;transl_table=11 ##sequence-region JAJSBG010000098.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000098.1 Genbank region 1 755 . + . ID=JAJSBG010000098.1:1..755;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000098.1 Genbank gene 139 612 . - . ID=gene-LVR01_11290;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LVR01_11290 JAJSBG010000098.1 Protein Homology CDS 139 612 . - 0 ID=cds-MCE2619727.1;Parent=gene-LVR01_11290;Dbxref=NCBI_GP:MCE2619727.1;Name=MCE2619727.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=LVR01_11290;product=IS200/IS605 family transposase;protein_id=MCE2619727.1;transl_table=11 ##sequence-region JAJSBG010000099.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000099.1 Genbank region 1 717 . + . ID=JAJSBG010000099.1:1..717;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000099.1 Genbank pseudogene 27 425 . + . ID=gene-LVR01_11295;Name=LVR01_11295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LVR01_11295;pseudo=true JAJSBG010000099.1 Protein Homology CDS 27 425 . + 0 ID=cds-LVR01_11295;Parent=gene-LVR01_11295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841499.1;locus_tag=LVR01_11295;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAJSBG010000099.1 Genbank gene 465 717 . + . ID=gene-LVR01_11300;Name=LVR01_11300;end_range=717,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_11300;partial=true JAJSBG010000099.1 Protein Homology CDS 465 717 . + 0 ID=cds-MCE2619728.1;Parent=gene-LVR01_11300;Dbxref=NCBI_GP:MCE2619728.1;Name=MCE2619728.1;end_range=717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=LVR01_11300;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCE2619728.1;transl_table=11 ##sequence-region JAJSBG010000009.1 1 54857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 JAJSBG010000009.1 Genbank region 1 54857 . + . ID=JAJSBG010000009.1:1..54857;Dbxref=taxon:257758;collected-by=Karolinska University hospital;collection-date=2019-11;country=Sweden: Stockholm%2C Danderyd hospital;gbkey=Src;isolation-source=blood;lat-lon=59.3502 N 18.0317 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=SPPN-FOHM JAJSBG010000009.1 Genbank gene 145 396 . - . ID=gene-LVR01_03850;Name=LVR01_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03850 JAJSBG010000009.1 Protein Homology CDS 145 396 . - 0 ID=cds-MCE2618411.1;Parent=gene-LVR01_03850;Dbxref=NCBI_GP:MCE2618411.1;Name=MCE2618411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890592.1;locus_tag=LVR01_03850;product=PqqD family protein;protein_id=MCE2618411.1;transl_table=11 JAJSBG010000009.1 Genbank gene 479 1309 . - . ID=gene-LVR01_03855;Name=LVR01_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03855 JAJSBG010000009.1 Protein Homology CDS 479 1309 . - 0 ID=cds-MCE2618412.1;Parent=gene-LVR01_03855;Dbxref=NCBI_GP:MCE2618412.1;Name=MCE2618412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016194.1;locus_tag=LVR01_03855;product=hypothetical protein;protein_id=MCE2618412.1;transl_table=11 JAJSBG010000009.1 Genbank gene 1309 1947 . - . ID=gene-LVR01_03860;Name=LVR01_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03860 JAJSBG010000009.1 Protein Homology CDS 1309 1947 . - 0 ID=cds-MCE2618413.1;Parent=gene-LVR01_03860;Dbxref=NCBI_GP:MCE2618413.1;Name=MCE2618413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620476.1;locus_tag=LVR01_03860;product=CPBP family glutamic-type intramembrane protease;protein_id=MCE2618413.1;transl_table=11 JAJSBG010000009.1 Genbank gene 2215 3015 . - . ID=gene-LVR01_03865;Name=LVR01_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03865 JAJSBG010000009.1 GeneMarkS-2+ CDS 2215 3015 . - 0 ID=cds-MCE2618414.1;Parent=gene-LVR01_03865;Dbxref=NCBI_GP:MCE2618414.1;Name=MCE2618414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LVR01_03865;product=ABC transporter permease;protein_id=MCE2618414.1;transl_table=11 JAJSBG010000009.1 Genbank gene 3008 3988 . - . ID=gene-LVR01_03870;Name=LVR01_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03870 JAJSBG010000009.1 Protein Homology CDS 3008 3988 . - 0 ID=cds-MCE2618415.1;Parent=gene-LVR01_03870;Dbxref=NCBI_GP:MCE2618415.1;Name=MCE2618415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895179.1;locus_tag=LVR01_03870;product=ABC transporter ATP-binding protein;protein_id=MCE2618415.1;transl_table=11 JAJSBG010000009.1 Genbank gene 4009 4803 . - . ID=gene-LVR01_03875;Name=LVR01_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03875 JAJSBG010000009.1 Protein Homology CDS 4009 4803 . - 0 ID=cds-MCE2618416.1;Parent=gene-LVR01_03875;Dbxref=NCBI_GP:MCE2618416.1;Name=MCE2618416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599441.1;locus_tag=LVR01_03875;product=ABC transporter permease;protein_id=MCE2618416.1;transl_table=11 JAJSBG010000009.1 Genbank gene 4800 5261 . - . ID=gene-LVR01_03880;Name=LVR01_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03880 JAJSBG010000009.1 Protein Homology CDS 4800 5261 . - 0 ID=cds-MCE2618417.1;Parent=gene-LVR01_03880;Dbxref=NCBI_GP:MCE2618417.1;Name=MCE2618417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584689.1;locus_tag=LVR01_03880;product=NUDIX domain-containing protein;protein_id=MCE2618417.1;transl_table=11 JAJSBG010000009.1 Genbank gene 5263 6177 . - . ID=gene-LVR01_03885;Name=LVR01_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03885 JAJSBG010000009.1 Protein Homology CDS 5263 6177 . - 0 ID=cds-MCE2618418.1;Parent=gene-LVR01_03885;Dbxref=NCBI_GP:MCE2618418.1;Name=MCE2618418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012933.2;locus_tag=LVR01_03885;product=DNA-3-methyladenine glycosylase;protein_id=MCE2618418.1;transl_table=11 JAJSBG010000009.1 Genbank gene 6146 6946 . - . ID=gene-LVR01_03890;Name=LVR01_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03890 JAJSBG010000009.1 Protein Homology CDS 6146 6946 . - 0 ID=cds-MCE2618419.1;Parent=gene-LVR01_03890;Dbxref=NCBI_GP:MCE2618419.1;Name=MCE2618419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734059.1;locus_tag=LVR01_03890;product=hypothetical protein;protein_id=MCE2618419.1;transl_table=11 JAJSBG010000009.1 Genbank gene 7069 9051 . - . ID=gene-LVR01_03895;Name=LVR01_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03895 JAJSBG010000009.1 Protein Homology CDS 7069 9051 . - 0 ID=cds-MCE2618420.1;Parent=gene-LVR01_03895;Dbxref=NCBI_GP:MCE2618420.1;Name=MCE2618420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760347.1;locus_tag=LVR01_03895;product=PEP/pyruvate-binding domain-containing protein;protein_id=MCE2618420.1;transl_table=11 JAJSBG010000009.1 Genbank gene 9055 9852 . - . ID=gene-LVR01_03900;Name=LVR01_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03900 JAJSBG010000009.1 Protein Homology CDS 9055 9852 . - 0 ID=cds-MCE2618421.1;Parent=gene-LVR01_03900;Dbxref=NCBI_GP:MCE2618421.1;Name=MCE2618421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410458.1;locus_tag=LVR01_03900;product=hypothetical protein;protein_id=MCE2618421.1;transl_table=11 JAJSBG010000009.1 Genbank gene 9995 13534 . - . ID=gene-LVR01_03905;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LVR01_03905 JAJSBG010000009.1 Protein Homology CDS 9995 13534 . - 0 ID=cds-MCE2618422.1;Parent=gene-LVR01_03905;Dbxref=NCBI_GP:MCE2618422.1;Name=MCE2618422.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280891.1;locus_tag=LVR01_03905;product=chromosome segregation protein SMC;protein_id=MCE2618422.1;transl_table=11 JAJSBG010000009.1 Genbank gene 13525 14223 . - . ID=gene-LVR01_03910;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LVR01_03910 JAJSBG010000009.1 Protein Homology CDS 13525 14223 . - 0 ID=cds-MCE2618423.1;Parent=gene-LVR01_03910;Dbxref=NCBI_GP:MCE2618423.1;Name=MCE2618423.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522086.1;locus_tag=LVR01_03910;product=ribonuclease III;protein_id=MCE2618423.1;transl_table=11 JAJSBG010000009.1 Genbank gene 14493 14966 . - . ID=gene-LVR01_03915;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LVR01_03915 JAJSBG010000009.1 Protein Homology CDS 14493 14966 . - 0 ID=cds-MCE2618424.1;Parent=gene-LVR01_03915;Dbxref=NCBI_GP:MCE2618424.1;Name=MCE2618424.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206386.1;locus_tag=LVR01_03915;product=IS200/IS605-like element ISSpn6 family transposase;protein_id=MCE2618424.1;transl_table=11 JAJSBG010000009.1 Genbank gene 15145 15216 . - . ID=gene-LVR01_03920;Name=LVR01_03920;gbkey=Gene;gene_biotype=tRNA;locus_tag=LVR01_03920 JAJSBG010000009.1 tRNAscan-SE tRNA 15145 15216 . - . ID=rna-LVR01_03920;Parent=gene-LVR01_03920;anticodon=(pos:complement(15181..15183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_03920;product=tRNA-Arg JAJSBG010000009.1 tRNAscan-SE exon 15145 15216 . - . ID=exon-LVR01_03920-1;Parent=rna-LVR01_03920;anticodon=(pos:complement(15181..15183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LVR01_03920;product=tRNA-Arg JAJSBG010000009.1 Genbank gene 15283 16269 . - . ID=gene-LVR01_03925;Name=LVR01_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03925 JAJSBG010000009.1 Protein Homology CDS 15283 16269 . - 0 ID=cds-MCE2618425.1;Parent=gene-LVR01_03925;Dbxref=NCBI_GP:MCE2618425.1;Name=MCE2618425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007516839.1;locus_tag=LVR01_03925;product=GMP reductase;protein_id=MCE2618425.1;transl_table=11 JAJSBG010000009.1 Genbank gene 16444 17757 . - . ID=gene-LVR01_03930;Name=LVR01_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03930 JAJSBG010000009.1 Protein Homology CDS 16444 17757 . - 0 ID=cds-MCE2618426.1;Parent=gene-LVR01_03930;Dbxref=NCBI_GP:MCE2618426.1;Name=MCE2618426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223073.1;locus_tag=LVR01_03930;product=McrC family protein;protein_id=MCE2618426.1;transl_table=11 JAJSBG010000009.1 Genbank gene 17744 19726 . - . ID=gene-LVR01_03935;Name=LVR01_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03935 JAJSBG010000009.1 Protein Homology CDS 17744 19726 . - 0 ID=cds-MCE2618427.1;Parent=gene-LVR01_03935;Dbxref=NCBI_GP:MCE2618427.1;Name=MCE2618427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253876.1;locus_tag=LVR01_03935;product=AAA family ATPase;protein_id=MCE2618427.1;transl_table=11 JAJSBG010000009.1 Genbank gene 19923 20702 . - . ID=gene-LVR01_03940;Name=LVR01_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03940 JAJSBG010000009.1 Protein Homology CDS 19923 20702 . - 0 ID=cds-MCE2618428.1;Parent=gene-LVR01_03940;Dbxref=NCBI_GP:MCE2618428.1;Name=MCE2618428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=LVR01_03940;product=translation factor (SUA5);protein_id=MCE2618428.1;transl_table=11 JAJSBG010000009.1 Genbank gene 20730 21323 . - . ID=gene-LVR01_03945;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LVR01_03945 JAJSBG010000009.1 Protein Homology CDS 20730 21323 . - 0 ID=cds-MCE2618429.1;Parent=gene-LVR01_03945;Dbxref=NCBI_GP:MCE2618429.1;Name=MCE2618429.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465762.1;locus_tag=LVR01_03945;product=3-isopropylmalate dehydratase small subunit;protein_id=MCE2618429.1;transl_table=11 JAJSBG010000009.1 Genbank gene 21333 22715 . - . ID=gene-LVR01_03950;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LVR01_03950 JAJSBG010000009.1 Protein Homology CDS 21333 22715 . - 0 ID=cds-MCE2618430.1;Parent=gene-LVR01_03950;Dbxref=NCBI_GP:MCE2618430.1;Name=MCE2618430.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258017.1;locus_tag=LVR01_03950;product=3-isopropylmalate dehydratase large subunit;protein_id=MCE2618430.1;transl_table=11 JAJSBG010000009.1 Genbank gene 22719 22988 . - . ID=gene-LVR01_03955;Name=LVR01_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03955 JAJSBG010000009.1 Protein Homology CDS 22719 22988 . - 0 ID=cds-MCE2618431.1;Parent=gene-LVR01_03955;Dbxref=NCBI_GP:MCE2618431.1;Name=MCE2618431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762418.1;locus_tag=LVR01_03955;product=DUF1294 domain-containing protein;protein_id=MCE2618431.1;transl_table=11 JAJSBG010000009.1 Genbank gene 22985 24022 . - . ID=gene-LVR01_03960;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LVR01_03960 JAJSBG010000009.1 Protein Homology CDS 22985 24022 . - 0 ID=cds-MCE2618432.1;Parent=gene-LVR01_03960;Dbxref=NCBI_GP:MCE2618432.1;Name=MCE2618432.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399454.1;locus_tag=LVR01_03960;product=3-isopropylmalate dehydrogenase;protein_id=MCE2618432.1;transl_table=11 JAJSBG010000009.1 Genbank gene 24034 25596 . - . ID=gene-LVR01_03965;Name=LVR01_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03965 JAJSBG010000009.1 Protein Homology CDS 24034 25596 . - 0 ID=cds-MCE2618433.1;Parent=gene-LVR01_03965;Dbxref=NCBI_GP:MCE2618433.1;Name=MCE2618433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261078.1;locus_tag=LVR01_03965;product=2-isopropylmalate synthase;protein_id=MCE2618433.1;transl_table=11 JAJSBG010000009.1 Genbank gene 25911 26567 . - . ID=gene-LVR01_03970;Name=LVR01_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03970 JAJSBG010000009.1 Protein Homology CDS 25911 26567 . - 0 ID=cds-MCE2618434.1;Parent=gene-LVR01_03970;Dbxref=NCBI_GP:MCE2618434.1;Name=MCE2618434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461593.1;locus_tag=LVR01_03970;product=MmcQ/YjbR family DNA-binding protein;protein_id=MCE2618434.1;transl_table=11 JAJSBG010000009.1 Genbank gene 26611 27243 . - . ID=gene-LVR01_03975;Name=LVR01_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03975 JAJSBG010000009.1 Protein Homology CDS 26611 27243 . - 0 ID=cds-MCE2618435.1;Parent=gene-LVR01_03975;Dbxref=NCBI_GP:MCE2618435.1;Name=MCE2618435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638771.1;locus_tag=LVR01_03975;product=copper homeostasis protein CutC;protein_id=MCE2618435.1;transl_table=11 JAJSBG010000009.1 Genbank gene 27336 27695 . - . ID=gene-LVR01_03980;Name=LVR01_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03980 JAJSBG010000009.1 Protein Homology CDS 27336 27695 . - 0 ID=cds-MCE2618436.1;Parent=gene-LVR01_03980;Dbxref=NCBI_GP:MCE2618436.1;Name=MCE2618436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258004.1;locus_tag=LVR01_03980;product=YbaN family protein;protein_id=MCE2618436.1;transl_table=11 JAJSBG010000009.1 Genbank gene 27801 29888 . - . ID=gene-LVR01_03985;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LVR01_03985 JAJSBG010000009.1 Protein Homology CDS 27801 29888 . - 0 ID=cds-MCE2618437.1;Parent=gene-LVR01_03985;Dbxref=NCBI_GP:MCE2618437.1;Name=MCE2618437.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179642.1;locus_tag=LVR01_03985;product=type I DNA topoisomerase;protein_id=MCE2618437.1;transl_table=11 JAJSBG010000009.1 Genbank gene 30054 31097 . - . ID=gene-LVR01_03990;Name=LVR01_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_03990 JAJSBG010000009.1 Protein Homology CDS 30054 31097 . - 0 ID=cds-MCE2618438.1;Parent=gene-LVR01_03990;Dbxref=NCBI_GP:MCE2618438.1;Name=MCE2618438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861634.1;locus_tag=LVR01_03990;product=TIGR00341 family protein;protein_id=MCE2618438.1;transl_table=11 JAJSBG010000009.1 Genbank gene 31871 32719 . - . ID=gene-LVR01_03995;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LVR01_03995 JAJSBG010000009.1 Protein Homology CDS 31871 32719 . - 0 ID=cds-MCE2618439.1;Parent=gene-LVR01_03995;Dbxref=NCBI_GP:MCE2618439.1;Name=MCE2618439.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257994.1;locus_tag=LVR01_03995;product=DNA-processing protein DprA;protein_id=MCE2618439.1;transl_table=11 JAJSBG010000009.1 Genbank gene 32817 33506 . - . ID=gene-LVR01_04000;Name=LVR01_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04000 JAJSBG010000009.1 Protein Homology CDS 32817 33506 . - 0 ID=cds-MCE2618440.1;Parent=gene-LVR01_04000;Dbxref=NCBI_GP:MCE2618440.1;Name=MCE2618440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399459.1;locus_tag=LVR01_04000;product=NTP transferase domain-containing protein;protein_id=MCE2618440.1;transl_table=11 JAJSBG010000009.1 Genbank gene 33518 34396 . - . ID=gene-LVR01_04005;Name=LVR01_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04005 JAJSBG010000009.1 Protein Homology CDS 33518 34396 . - 0 ID=cds-MCE2618441.1;Parent=gene-LVR01_04005;Dbxref=NCBI_GP:MCE2618441.1;Name=MCE2618441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837620.1;locus_tag=LVR01_04005;product=DMT family transporter;protein_id=MCE2618441.1;transl_table=11 JAJSBG010000009.1 Genbank gene 34386 35255 . - . ID=gene-LVR01_04010;Name=licA;gbkey=Gene;gene=licA;gene_biotype=protein_coding;locus_tag=LVR01_04010 JAJSBG010000009.1 Protein Homology CDS 34386 35255 . - 0 ID=cds-MCE2618442.1;Parent=gene-LVR01_04010;Dbxref=NCBI_GP:MCE2618442.1;Name=MCE2618442.1;gbkey=CDS;gene=licA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411210.1;locus_tag=LVR01_04010;product=choline kinase LicA;protein_id=MCE2618442.1;transl_table=11 JAJSBG010000009.1 Genbank gene 35272 36294 . - . ID=gene-LVR01_04015;Name=LVR01_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04015 JAJSBG010000009.1 Protein Homology CDS 35272 36294 . - 0 ID=cds-MCE2618443.1;Parent=gene-LVR01_04015;Dbxref=NCBI_GP:MCE2618443.1;Name=MCE2618443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257983.1;locus_tag=LVR01_04015;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=MCE2618443.1;transl_table=11 JAJSBG010000009.1 Genbank gene 36299 37006 . - . ID=gene-LVR01_04020;Name=LVR01_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04020 JAJSBG010000009.1 Protein Homology CDS 36299 37006 . - 0 ID=cds-MCE2618444.1;Parent=gene-LVR01_04020;Dbxref=NCBI_GP:MCE2618444.1;Name=MCE2618444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465903.1;locus_tag=LVR01_04020;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MCE2618444.1;transl_table=11 JAJSBG010000009.1 Genbank gene 37447 38934 . + . ID=gene-LVR01_04025;Name=tacF;gbkey=Gene;gene=tacF;gene_biotype=protein_coding;locus_tag=LVR01_04025 JAJSBG010000009.1 Protein Homology CDS 37447 38934 . + 0 ID=cds-MCE2618445.1;Parent=gene-LVR01_04025;Dbxref=NCBI_GP:MCE2618445.1;Name=MCE2618445.1;gbkey=CDS;gene=tacF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835918.1;locus_tag=LVR01_04025;product=type IV teichoic acid flippase TacF;protein_id=MCE2618445.1;transl_table=11 JAJSBG010000009.1 Genbank gene 38944 39747 . + . ID=gene-LVR01_04030;Name=LVR01_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04030 JAJSBG010000009.1 Protein Homology CDS 38944 39747 . + 0 ID=cds-MCE2618446.1;Parent=gene-LVR01_04030;Dbxref=NCBI_GP:MCE2618446.1;Name=MCE2618446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259727.1;locus_tag=LVR01_04030;product=phosphorylcholine transferase LicD;protein_id=MCE2618446.1;transl_table=11 JAJSBG010000009.1 Genbank gene 39749 40558 . + . ID=gene-LVR01_04035;Name=LVR01_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04035 JAJSBG010000009.1 Protein Homology CDS 39749 40558 . + 0 ID=cds-MCE2618447.1;Parent=gene-LVR01_04035;Dbxref=NCBI_GP:MCE2618447.1;Name=MCE2618447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199643.1;locus_tag=LVR01_04035;product=phosphorylcholine transferase LicD;protein_id=MCE2618447.1;transl_table=11 JAJSBG010000009.1 Genbank gene 40628 43804 . - . ID=gene-LVR01_04040;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LVR01_04040 JAJSBG010000009.1 Protein Homology CDS 40628 43804 . - 0 ID=cds-MCE2618448.1;Parent=gene-LVR01_04040;Dbxref=NCBI_GP:MCE2618448.1;Name=MCE2618448.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803305.1;locus_tag=LVR01_04040;product=carbamoyl-phosphate synthase large subunit;protein_id=MCE2618448.1;transl_table=11 JAJSBG010000009.1 Genbank gene 44253 45332 . - . ID=gene-LVR01_04045;Name=LVR01_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04045 JAJSBG010000009.1 Protein Homology CDS 44253 45332 . - 0 ID=cds-MCE2618449.1;Parent=gene-LVR01_04045;Dbxref=NCBI_GP:MCE2618449.1;Name=MCE2618449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166701.1;locus_tag=LVR01_04045;product=carbamoyl phosphate synthase small subunit;protein_id=MCE2618449.1;transl_table=11 JAJSBG010000009.1 Genbank gene 45382 46305 . - . ID=gene-LVR01_04050;Name=LVR01_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04050 JAJSBG010000009.1 Protein Homology CDS 45382 46305 . - 0 ID=cds-MCE2618450.1;Parent=gene-LVR01_04050;Dbxref=NCBI_GP:MCE2618450.1;Name=MCE2618450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293822.1;locus_tag=LVR01_04050;product=aspartate carbamoyltransferase catalytic subunit;protein_id=MCE2618450.1;transl_table=11 JAJSBG010000009.1 Genbank gene 46324 46845 . - . ID=gene-LVR01_04055;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LVR01_04055 JAJSBG010000009.1 Protein Homology CDS 46324 46845 . - 0 ID=cds-MCE2618451.1;Parent=gene-LVR01_04055;Dbxref=NCBI_GP:MCE2618451.1;Name=MCE2618451.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850024.1;locus_tag=LVR01_04055;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=MCE2618451.1;transl_table=11 JAJSBG010000009.1 Genbank gene 47056 47685 . - . ID=gene-LVR01_04060;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LVR01_04060 JAJSBG010000009.1 Protein Homology CDS 47056 47685 . - 0 ID=cds-MCE2618452.1;Parent=gene-LVR01_04060;Dbxref=NCBI_GP:MCE2618452.1;Name=MCE2618452.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244461.1;locus_tag=LVR01_04060;product=endonuclease III;protein_id=MCE2618452.1;transl_table=11 JAJSBG010000009.1 Genbank gene 47685 48227 . - . ID=gene-LVR01_04065;Name=LVR01_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04065 JAJSBG010000009.1 Protein Homology CDS 47685 48227 . - 0 ID=cds-MCE2618453.1;Parent=gene-LVR01_04065;Dbxref=NCBI_GP:MCE2618453.1;Name=MCE2618453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398453.1;locus_tag=LVR01_04065;product=DUF177 domain-containing protein;protein_id=MCE2618453.1;transl_table=11 JAJSBG010000009.1 Genbank gene 48852 50378 . + . ID=gene-LVR01_04070;Name=LVR01_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04070 JAJSBG010000009.1 Protein Homology CDS 48852 50378 . + 0 ID=cds-MCE2618454.1;Parent=gene-LVR01_04070;Dbxref=NCBI_GP:MCE2618454.1;Name=MCE2618454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247311.1;locus_tag=LVR01_04070;product=ATP-binding cassette domain-containing protein;protein_id=MCE2618454.1;transl_table=11 JAJSBG010000009.1 Genbank gene 50526 51425 . - . ID=gene-LVR01_04075;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LVR01_04075 JAJSBG010000009.1 Protein Homology CDS 50526 51425 . - 0 ID=cds-MCE2618455.1;Parent=gene-LVR01_04075;Dbxref=NCBI_GP:MCE2618455.1;Name=MCE2618455.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895736.1;locus_tag=LVR01_04075;product=zinc metalloprotease HtpX;protein_id=MCE2618455.1;transl_table=11 JAJSBG010000009.1 Genbank gene 51427 51987 . - . ID=gene-LVR01_04080;Name=LVR01_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04080 JAJSBG010000009.1 Protein Homology CDS 51427 51987 . - 0 ID=cds-MCE2618456.1;Parent=gene-LVR01_04080;Dbxref=NCBI_GP:MCE2618456.1;Name=MCE2618456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219838.1;locus_tag=LVR01_04080;product=LemA family protein;protein_id=MCE2618456.1;transl_table=11 JAJSBG010000009.1 Genbank gene 52081 52794 . + . ID=gene-LVR01_04085;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LVR01_04085 JAJSBG010000009.1 Protein Homology CDS 52081 52794 . + 0 ID=cds-MCE2618457.1;Parent=gene-LVR01_04085;Dbxref=NCBI_GP:MCE2618457.1;Name=MCE2618457.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260112.1;locus_tag=LVR01_04085;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=MCE2618457.1;transl_table=11 JAJSBG010000009.1 Genbank gene 53097 54380 . + . ID=gene-LVR01_04090;Name=LVR01_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LVR01_04090 JAJSBG010000009.1 Protein Homology CDS 53097 54380 . + 0 ID=cds-MCE2618458.1;Parent=gene-LVR01_04090;Dbxref=NCBI_GP:MCE2618458.1;Name=MCE2618458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007554578.1;locus_tag=LVR01_04090;product=NCS2 family nucleobase:cation symporter;protein_id=MCE2618458.1;transl_table=11 ###