##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2433066v1 #!genome-build-accession NCBI_Assembly:GCA_024330665.1 #!annotation-date 07/14/2022 18:23:03 #!annotation-source NCBI ##sequence-region JANDXE010000010.1 1 104508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000010.1 Genbank region 1 104508 . + . ID=JANDXE010000010.1:1..104508;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000010.1 Genbank gene 224 592 . + . ID=gene-NND05_06445;Name=NND05_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06445 JANDXE010000010.1 GeneMarkS-2+ CDS 224 592 . + 0 ID=cds-MCP9537198.1;Parent=gene-NND05_06445;Dbxref=NCBI_GP:MCP9537198.1;Name=MCP9537198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06445;product=hypothetical protein;protein_id=MCP9537198.1;transl_table=11 JANDXE010000010.1 Genbank gene 592 1647 . + . ID=gene-NND05_06450;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=NND05_06450 JANDXE010000010.1 Protein Homology CDS 592 1647 . + 0 ID=cds-MCP9537199.1;Parent=gene-NND05_06450;Dbxref=NCBI_GP:MCP9537199.1;Name=MCP9537199.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005677514.1;locus_tag=NND05_06450;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=MCP9537199.1;transl_table=11 JANDXE010000010.1 Genbank gene 1723 2478 . - . ID=gene-NND05_06455;Name=NND05_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06455 JANDXE010000010.1 GeneMarkS-2+ CDS 1723 2478 . - 0 ID=cds-MCP9537200.1;Parent=gene-NND05_06455;Dbxref=NCBI_GP:MCP9537200.1;Name=MCP9537200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06455;product=hypothetical protein;protein_id=MCP9537200.1;transl_table=11 JANDXE010000010.1 Genbank gene 2487 3299 . - . ID=gene-NND05_06460;Name=NND05_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06460 JANDXE010000010.1 Protein Homology CDS 2487 3299 . - 0 ID=cds-MCP9537201.1;Parent=gene-NND05_06460;Dbxref=NCBI_GP:MCP9537201.1;Name=MCP9537201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848464.1;locus_tag=NND05_06460;product=hypothetical protein;protein_id=MCP9537201.1;transl_table=11 JANDXE010000010.1 Genbank gene 3353 4180 . - . ID=gene-NND05_06465;Name=NND05_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06465 JANDXE010000010.1 Protein Homology CDS 3353 4180 . - 0 ID=cds-MCP9537202.1;Parent=gene-NND05_06465;Dbxref=NCBI_GP:MCP9537202.1;Name=MCP9537202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006043812.1;locus_tag=NND05_06465;product=ADP-ribosylglycohydrolase family protein;protein_id=MCP9537202.1;transl_table=11 JANDXE010000010.1 Genbank gene 4203 4592 . - . ID=gene-NND05_06470;Name=NND05_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06470 JANDXE010000010.1 Protein Homology CDS 4203 4592 . - 0 ID=cds-MCP9537203.1;Parent=gene-NND05_06470;Dbxref=NCBI_GP:MCP9537203.1;Name=MCP9537203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014774484.1;locus_tag=NND05_06470;product=hypothetical protein;protein_id=MCP9537203.1;transl_table=11 JANDXE010000010.1 Genbank gene 5596 6135 . + . ID=gene-NND05_06475;Name=NND05_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06475 JANDXE010000010.1 Protein Homology CDS 5596 6135 . + 0 ID=cds-MCP9537204.1;Parent=gene-NND05_06475;Dbxref=NCBI_GP:MCP9537204.1;Name=MCP9537204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015531885.1;locus_tag=NND05_06475;product=RNA polymerase sigma factor;protein_id=MCP9537204.1;transl_table=11 JANDXE010000010.1 Genbank gene 6183 6566 . + . ID=gene-NND05_06480;Name=NND05_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06480 JANDXE010000010.1 GeneMarkS-2+ CDS 6183 6566 . + 0 ID=cds-MCP9537205.1;Parent=gene-NND05_06480;Dbxref=NCBI_GP:MCP9537205.1;Name=MCP9537205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06480;product=hypothetical protein;protein_id=MCP9537205.1;transl_table=11 JANDXE010000010.1 Genbank gene 6623 7123 . + . ID=gene-NND05_06485;Name=NND05_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06485 JANDXE010000010.1 Protein Homology CDS 6623 7123 . + 0 ID=cds-MCP9537206.1;Parent=gene-NND05_06485;Dbxref=NCBI_GP:MCP9537206.1;Name=MCP9537206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005817949.1;locus_tag=NND05_06485;product=hypothetical protein;protein_id=MCP9537206.1;transl_table=11 JANDXE010000010.1 Genbank gene 7239 8423 . - . ID=gene-NND05_06490;Name=NND05_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06490 JANDXE010000010.1 Protein Homology CDS 7239 8423 . - 0 ID=cds-MCP9537207.1;Parent=gene-NND05_06490;Dbxref=NCBI_GP:MCP9537207.1;Name=MCP9537207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008764516.1;locus_tag=NND05_06490;product=DUF3810 domain-containing protein;protein_id=MCP9537207.1;transl_table=11 JANDXE010000010.1 Genbank gene 8784 9482 . - . ID=gene-NND05_06495;Name=NND05_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06495 JANDXE010000010.1 Protein Homology CDS 8784 9482 . - 0 ID=cds-MCP9537208.1;Parent=gene-NND05_06495;Dbxref=NCBI_GP:MCP9537208.1;Name=MCP9537208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848456.1;locus_tag=NND05_06495;product=M15 family metallopeptidase;protein_id=MCP9537208.1;transl_table=11 JANDXE010000010.1 Genbank gene 9527 10021 . - . ID=gene-NND05_06500;Name=NND05_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06500 JANDXE010000010.1 Protein Homology CDS 9527 10021 . - 0 ID=cds-MCP9537209.1;Parent=gene-NND05_06500;Dbxref=NCBI_GP:MCP9537209.1;Name=MCP9537209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848455.1;locus_tag=NND05_06500;product=Lrp/AsnC family transcriptional regulator;protein_id=MCP9537209.1;transl_table=11 JANDXE010000010.1 Genbank gene 10270 11424 . + . ID=gene-NND05_06505;Name=NND05_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06505 JANDXE010000010.1 Protein Homology CDS 10270 11424 . + 0 ID=cds-MCP9537210.1;Parent=gene-NND05_06505;Dbxref=NCBI_GP:MCP9537210.1;Name=MCP9537210.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011760.1;locus_tag=NND05_06505;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=MCP9537210.1;transl_table=11 JANDXE010000010.1 Genbank gene 11369 12970 . - . ID=gene-NND05_06510;Name=NND05_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06510 JANDXE010000010.1 Protein Homology CDS 11369 12970 . - 0 ID=cds-MCP9537211.1;Parent=gene-NND05_06510;Dbxref=NCBI_GP:MCP9537211.1;Name=MCP9537211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014298351.1;locus_tag=NND05_06510;product=PepSY domain-containing protein;protein_id=MCP9537211.1;transl_table=11 JANDXE010000010.1 Genbank gene 13212 13676 . + . ID=gene-NND05_06515;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NND05_06515 JANDXE010000010.1 Protein Homology CDS 13212 13676 . + 0 ID=cds-MCP9537212.1;Parent=gene-NND05_06515;Dbxref=NCBI_GP:MCP9537212.1;Name=MCP9537212.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848453.1;locus_tag=NND05_06515;product=transcription elongation factor GreA;protein_id=MCP9537212.1;transl_table=11 JANDXE010000010.1 Genbank gene 13835 14437 . + . ID=gene-NND05_06520;Name=NND05_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06520 JANDXE010000010.1 Protein Homology CDS 13835 14437 . + 0 ID=cds-MCP9537213.1;Parent=gene-NND05_06520;Dbxref=NCBI_GP:MCP9537213.1;Name=MCP9537213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015534.2;locus_tag=NND05_06520;product=peptidase E;protein_id=MCP9537213.1;transl_table=11 JANDXE010000010.1 Genbank gene 14694 16613 . - . ID=gene-NND05_06525;Name=NND05_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06525 JANDXE010000010.1 Protein Homology CDS 14694 16613 . - 0 ID=cds-MCP9537214.1;Parent=gene-NND05_06525;Dbxref=NCBI_GP:MCP9537214.1;Name=MCP9537214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008122981.1;locus_tag=NND05_06525;product=DNA mismatch repair protein MutS;protein_id=MCP9537214.1;transl_table=11 JANDXE010000010.1 Genbank gene 16625 17056 . - . ID=gene-NND05_06530;Name=NND05_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06530 JANDXE010000010.1 Protein Homology CDS 16625 17056 . - 0 ID=cds-MCP9537215.1;Parent=gene-NND05_06530;Dbxref=NCBI_GP:MCP9537215.1;Name=MCP9537215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=NND05_06530;product=nitroreductase family protein;protein_id=MCP9537215.1;transl_table=11 JANDXE010000010.1 Genbank gene 17354 18031 . - . ID=gene-NND05_06535;Name=NND05_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06535 JANDXE010000010.1 GeneMarkS-2+ CDS 17354 18031 . - 0 ID=cds-MCP9537216.1;Parent=gene-NND05_06535;Dbxref=NCBI_GP:MCP9537216.1;Name=MCP9537216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06535;product=hypothetical protein;protein_id=MCP9537216.1;transl_table=11 JANDXE010000010.1 Genbank gene 18318 18950 . + . ID=gene-NND05_06540;Name=NND05_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06540 JANDXE010000010.1 Protein Homology CDS 18318 18950 . + 0 ID=cds-MCP9537217.1;Parent=gene-NND05_06540;Dbxref=NCBI_GP:MCP9537217.1;Name=MCP9537217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272370.1;locus_tag=NND05_06540;product=nitroreductase family protein;protein_id=MCP9537217.1;transl_table=11 JANDXE010000010.1 Genbank gene 19130 19609 . + . ID=gene-NND05_06545;Name=NND05_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06545 JANDXE010000010.1 Protein Homology CDS 19130 19609 . + 0 ID=cds-MCP9537218.1;Parent=gene-NND05_06545;Dbxref=NCBI_GP:MCP9537218.1;Name=MCP9537218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=NND05_06545;product=helix-turn-helix domain-containing protein;protein_id=MCP9537218.1;transl_table=11 JANDXE010000010.1 Genbank gene 19606 20097 . + . ID=gene-NND05_06550;Name=NND05_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06550 JANDXE010000010.1 Protein Homology CDS 19606 20097 . + 0 ID=cds-MCP9537219.1;Parent=gene-NND05_06550;Dbxref=NCBI_GP:MCP9537219.1;Name=MCP9537219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024550.2;locus_tag=NND05_06550;product=DUF3990 domain-containing protein;protein_id=MCP9537219.1;transl_table=11 JANDXE010000010.1 Genbank gene 20102 20305 . + . ID=gene-NND05_06555;Name=NND05_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06555 JANDXE010000010.1 GeneMarkS-2+ CDS 20102 20305 . + 0 ID=cds-MCP9537220.1;Parent=gene-NND05_06555;Dbxref=NCBI_GP:MCP9537220.1;Name=MCP9537220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06555;product=hypothetical protein;protein_id=MCP9537220.1;transl_table=11 JANDXE010000010.1 Genbank gene 20448 21977 . - . ID=gene-NND05_06560;Name=NND05_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06560 JANDXE010000010.1 Protein Homology CDS 20448 21977 . - 0 ID=cds-MCP9537221.1;Parent=gene-NND05_06560;Dbxref=NCBI_GP:MCP9537221.1;Name=MCP9537221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338516.1;locus_tag=NND05_06560;product=hypothetical protein;protein_id=MCP9537221.1;transl_table=11 JANDXE010000010.1 Genbank gene 22021 24837 . - . ID=gene-NND05_06565;Name=NND05_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06565 JANDXE010000010.1 Protein Homology CDS 22021 24837 . - 0 ID=cds-MCP9537222.1;Parent=gene-NND05_06565;Dbxref=NCBI_GP:MCP9537222.1;Name=MCP9537222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338515.1;locus_tag=NND05_06565;product=TonB-dependent receptor;protein_id=MCP9537222.1;transl_table=11 JANDXE010000010.1 Genbank gene 25017 25334 . + . ID=gene-NND05_06570;Name=NND05_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06570 JANDXE010000010.1 Protein Homology CDS 25017 25334 . + 0 ID=cds-MCP9537223.1;Parent=gene-NND05_06570;Dbxref=NCBI_GP:MCP9537223.1;Name=MCP9537223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008775107.1;locus_tag=NND05_06570;product=helix-turn-helix domain-containing protein;protein_id=MCP9537223.1;transl_table=11 JANDXE010000010.1 Genbank gene 25425 25583 . + . ID=gene-NND05_06575;Name=NND05_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06575 JANDXE010000010.1 GeneMarkS-2+ CDS 25425 25583 . + 0 ID=cds-MCP9537224.1;Parent=gene-NND05_06575;Dbxref=NCBI_GP:MCP9537224.1;Name=MCP9537224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06575;product=hypothetical protein;protein_id=MCP9537224.1;transl_table=11 JANDXE010000010.1 Genbank gene 25615 26532 . - . ID=gene-NND05_06580;Name=NND05_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06580 JANDXE010000010.1 GeneMarkS-2+ CDS 25615 26532 . - 0 ID=cds-MCP9537225.1;Parent=gene-NND05_06580;Dbxref=NCBI_GP:MCP9537225.1;Name=MCP9537225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06580;product=hypothetical protein;protein_id=MCP9537225.1;transl_table=11 JANDXE010000010.1 Genbank gene 26772 28451 . + . ID=gene-NND05_06585;Name=NND05_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06585 JANDXE010000010.1 Protein Homology CDS 26772 28451 . + 0 ID=cds-MCP9537226.1;Parent=gene-NND05_06585;Dbxref=NCBI_GP:MCP9537226.1;Name=MCP9537226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848438.1;locus_tag=NND05_06585;product=ATP-binding protein;protein_id=MCP9537226.1;transl_table=11 JANDXE010000010.1 Genbank gene 28582 29481 . - . ID=gene-NND05_06590;Name=NND05_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06590 JANDXE010000010.1 Protein Homology CDS 28582 29481 . - 0 ID=cds-MCP9537227.1;Parent=gene-NND05_06590;Dbxref=NCBI_GP:MCP9537227.1;Name=MCP9537227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848437.1;locus_tag=NND05_06590;product=WYL domain-containing protein;protein_id=MCP9537227.1;transl_table=11 JANDXE010000010.1 Genbank gene 29778 30596 . + . ID=gene-NND05_06595;Name=NND05_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06595 JANDXE010000010.1 GeneMarkS-2+ CDS 29778 30596 . + 0 ID=cds-MCP9537228.1;Parent=gene-NND05_06595;Dbxref=NCBI_GP:MCP9537228.1;Name=MCP9537228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06595;product=hypothetical protein;protein_id=MCP9537228.1;transl_table=11 JANDXE010000010.1 Genbank gene 30633 31301 . + . ID=gene-NND05_06600;Name=NND05_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06600 JANDXE010000010.1 GeneMarkS-2+ CDS 30633 31301 . + 0 ID=cds-MCP9537229.1;Parent=gene-NND05_06600;Dbxref=NCBI_GP:MCP9537229.1;Name=MCP9537229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06600;product=hypothetical protein;protein_id=MCP9537229.1;transl_table=11 JANDXE010000010.1 Genbank gene 31515 33080 . + . ID=gene-NND05_06605;Name=NND05_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06605 JANDXE010000010.1 Protein Homology CDS 31515 33080 . + 0 ID=cds-MCP9537230.1;Parent=gene-NND05_06605;Dbxref=NCBI_GP:MCP9537230.1;Name=MCP9537230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848530.1;locus_tag=NND05_06605;product=ATP-binding protein;protein_id=MCP9537230.1;transl_table=11 JANDXE010000010.1 Genbank gene 33386 34756 . + . ID=gene-NND05_06610;Name=nhaD;gbkey=Gene;gene=nhaD;gene_biotype=protein_coding;locus_tag=NND05_06610 JANDXE010000010.1 Protein Homology CDS 33386 34756 . + 0 ID=cds-MCP9537231.1;Parent=gene-NND05_06610;Dbxref=NCBI_GP:MCP9537231.1;Name=MCP9537231.1;Ontology_term=GO:0006814,GO:0015297;gbkey=CDS;gene=nhaD;go_function=antiporter activity|0015297||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848421.1;locus_tag=NND05_06610;product=sodium:proton antiporter NhaD;protein_id=MCP9537231.1;transl_table=11 JANDXE010000010.1 Genbank gene 35040 36926 . - . ID=gene-NND05_06615;Name=NND05_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06615 JANDXE010000010.1 Protein Homology CDS 35040 36926 . - 0 ID=cds-MCP9537232.1;Parent=gene-NND05_06615;Dbxref=NCBI_GP:MCP9537232.1;Name=MCP9537232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848420.1;locus_tag=NND05_06615;product=DUF3874 domain-containing protein;protein_id=MCP9537232.1;transl_table=11 JANDXE010000010.1 Genbank gene 37277 37732 . - . ID=gene-NND05_06620;Name=NND05_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06620 JANDXE010000010.1 Protein Homology CDS 37277 37732 . - 0 ID=cds-MCP9537233.1;Parent=gene-NND05_06620;Dbxref=NCBI_GP:MCP9537233.1;Name=MCP9537233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039981.1;locus_tag=NND05_06620;product=DUF6078 family protein;protein_id=MCP9537233.1;transl_table=11 JANDXE010000010.1 Genbank gene 38257 38502 . + . ID=gene-NND05_06625;Name=NND05_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06625 JANDXE010000010.1 GeneMarkS-2+ CDS 38257 38502 . + 0 ID=cds-MCP9537234.1;Parent=gene-NND05_06625;Dbxref=NCBI_GP:MCP9537234.1;Name=MCP9537234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06625;product=hypothetical protein;protein_id=MCP9537234.1;transl_table=11 JANDXE010000010.1 Genbank gene 38492 38755 . + . ID=gene-NND05_06630;Name=NND05_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06630 JANDXE010000010.1 Protein Homology CDS 38492 38755 . + 0 ID=cds-MCP9537235.1;Parent=gene-NND05_06630;Dbxref=NCBI_GP:MCP9537235.1;Name=MCP9537235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275458.1;locus_tag=NND05_06630;product=addiction module toxin RelE;protein_id=MCP9537235.1;transl_table=11 JANDXE010000010.1 Genbank gene 39491 41755 . + . ID=gene-NND05_06635;Name=NND05_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06635 JANDXE010000010.1 Protein Homology CDS 39491 41755 . + 0 ID=cds-MCP9537236.1;Parent=gene-NND05_06635;Dbxref=NCBI_GP:MCP9537236.1;Name=MCP9537236.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004356627.1;locus_tag=NND05_06635;product=N-6 DNA methylase;protein_id=MCP9537236.1;transl_table=11 JANDXE010000010.1 Genbank gene 41762 43120 . + . ID=gene-NND05_06640;Name=NND05_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06640 JANDXE010000010.1 Protein Homology CDS 41762 43120 . + 0 ID=cds-MCP9537237.1;Parent=gene-NND05_06640;Dbxref=NCBI_GP:MCP9537237.1;Name=MCP9537237.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NND05_06640;product=restriction endonuclease subunit S;protein_id=MCP9537237.1;transl_table=11 JANDXE010000010.1 Genbank gene 43123 44850 . + . ID=gene-NND05_06645;Name=NND05_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06645 JANDXE010000010.1 Protein Homology CDS 43123 44850 . + 0 ID=cds-MCP9537238.1;Parent=gene-NND05_06645;Dbxref=NCBI_GP:MCP9537238.1;Name=MCP9537238.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=NND05_06645;product=AAA family ATPase;protein_id=MCP9537238.1;transl_table=11 JANDXE010000010.1 Genbank gene 44863 45726 . + . ID=gene-NND05_06650;Name=NND05_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06650 JANDXE010000010.1 GeneMarkS-2+ CDS 44863 45726 . + 0 ID=cds-MCP9537239.1;Parent=gene-NND05_06650;Dbxref=NCBI_GP:MCP9537239.1;Name=MCP9537239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06650;product=hypothetical protein;protein_id=MCP9537239.1;transl_table=11 JANDXE010000010.1 Genbank pseudogene 45738 45878 . + . ID=gene-NND05_06655;Name=NND05_06655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_06655;pseudo=true JANDXE010000010.1 Protein Homology CDS 45738 45878 . + 0 ID=cds-NND05_06655;Parent=gene-NND05_06655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=NND05_06655;product=AAA family ATPase;pseudo=true;transl_table=11 JANDXE010000010.1 Genbank gene 46047 46805 . + . ID=gene-NND05_06660;Name=NND05_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06660 JANDXE010000010.1 Protein Homology CDS 46047 46805 . + 0 ID=cds-MCP9537240.1;Parent=gene-NND05_06660;Dbxref=NCBI_GP:MCP9537240.1;Name=MCP9537240.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=NND05_06660;product=AAA family ATPase;protein_id=MCP9537240.1;transl_table=11 JANDXE010000010.1 Genbank gene 46802 47449 . + . ID=gene-NND05_06665;Name=NND05_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06665 JANDXE010000010.1 Protein Homology CDS 46802 47449 . + 0 ID=cds-MCP9537241.1;Parent=gene-NND05_06665;Dbxref=NCBI_GP:MCP9537241.1;Name=MCP9537241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004349846.1;locus_tag=NND05_06665;product=DUF4276 family protein;protein_id=MCP9537241.1;transl_table=11 JANDXE010000010.1 Genbank gene 47533 48582 . + . ID=gene-NND05_06670;Name=NND05_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06670 JANDXE010000010.1 GeneMarkS-2+ CDS 47533 48582 . + 0 ID=cds-MCP9537242.1;Parent=gene-NND05_06670;Dbxref=NCBI_GP:MCP9537242.1;Name=MCP9537242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06670;product=hypothetical protein;protein_id=MCP9537242.1;transl_table=11 JANDXE010000010.1 Genbank gene 48628 49185 . - . ID=gene-NND05_06675;Name=NND05_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06675 JANDXE010000010.1 Protein Homology CDS 48628 49185 . - 0 ID=cds-MCP9537243.1;Parent=gene-NND05_06675;Dbxref=NCBI_GP:MCP9537243.1;Name=MCP9537243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909620.1;locus_tag=NND05_06675;product=hypothetical protein;protein_id=MCP9537243.1;transl_table=11 JANDXE010000010.1 Genbank gene 49366 49914 . + . ID=gene-NND05_06680;Name=NND05_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06680 JANDXE010000010.1 GeneMarkS-2+ CDS 49366 49914 . + 0 ID=cds-MCP9537244.1;Parent=gene-NND05_06680;Dbxref=NCBI_GP:MCP9537244.1;Name=MCP9537244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06680;product=hypothetical protein;protein_id=MCP9537244.1;transl_table=11 JANDXE010000010.1 Genbank gene 50418 51488 . + . ID=gene-NND05_06685;Name=NND05_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06685 JANDXE010000010.1 Protein Homology CDS 50418 51488 . + 0 ID=cds-MCP9537245.1;Parent=gene-NND05_06685;Dbxref=NCBI_GP:MCP9537245.1;Name=MCP9537245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008997498.1;locus_tag=NND05_06685;product=DUF1848 domain-containing protein;protein_id=MCP9537245.1;transl_table=11 JANDXE010000010.1 Genbank gene 51485 55621 . + . ID=gene-NND05_06690;Name=NND05_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06690 JANDXE010000010.1 Protein Homology CDS 51485 55621 . + 0 ID=cds-MCP9537246.1;Parent=gene-NND05_06690;Dbxref=NCBI_GP:MCP9537246.1;Name=MCP9537246.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008997499.1;locus_tag=NND05_06690;product=DEAD/DEAH box helicase;protein_id=MCP9537246.1;transl_table=11 JANDXE010000010.1 Genbank gene 55618 56016 . + . ID=gene-NND05_06695;Name=NND05_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06695 JANDXE010000010.1 Protein Homology CDS 55618 56016 . + 0 ID=cds-MCP9537247.1;Parent=gene-NND05_06695;Dbxref=NCBI_GP:MCP9537247.1;Name=MCP9537247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008770816.1;locus_tag=NND05_06695;product=hypothetical protein;protein_id=MCP9537247.1;transl_table=11 JANDXE010000010.1 Genbank gene 56130 57665 . + . ID=gene-NND05_06700;Name=NND05_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06700 JANDXE010000010.1 Protein Homology CDS 56130 57665 . + 0 ID=cds-MCP9537248.1;Parent=gene-NND05_06700;Dbxref=NCBI_GP:MCP9537248.1;Name=MCP9537248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=NND05_06700;product=leucine-rich repeat protein;protein_id=MCP9537248.1;transl_table=11 JANDXE010000010.1 Genbank gene 57740 58144 . + . ID=gene-NND05_06705;Name=NND05_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06705 JANDXE010000010.1 Protein Homology CDS 57740 58144 . + 0 ID=cds-MCP9537249.1;Parent=gene-NND05_06705;Dbxref=NCBI_GP:MCP9537249.1;Name=MCP9537249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.2;locus_tag=NND05_06705;product=ADP-ribosylglycohydrolase family protein;protein_id=MCP9537249.1;transl_table=11 JANDXE010000010.1 Genbank gene 58315 59235 . + . ID=gene-NND05_06710;Name=NND05_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06710 JANDXE010000010.1 Protein Homology CDS 58315 59235 . + 0 ID=cds-MCP9537250.1;Parent=gene-NND05_06710;Dbxref=NCBI_GP:MCP9537250.1;Name=MCP9537250.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.2;locus_tag=NND05_06710;product=ADP-ribosylglycohydrolase family protein;protein_id=MCP9537250.1;transl_table=11 JANDXE010000010.1 Genbank gene 59332 60312 . + . ID=gene-NND05_06715;Name=NND05_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06715 JANDXE010000010.1 Protein Homology CDS 59332 60312 . + 0 ID=cds-MCP9537251.1;Parent=gene-NND05_06715;Dbxref=NCBI_GP:MCP9537251.1;Name=MCP9537251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848404.1;locus_tag=NND05_06715;product=ADP-ribosylglycohydrolase family protein;protein_id=MCP9537251.1;transl_table=11 JANDXE010000010.1 Genbank gene 60539 61711 . - . ID=gene-NND05_06720;Name=NND05_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06720 JANDXE010000010.1 Protein Homology CDS 60539 61711 . - 0 ID=cds-MCP9537252.1;Parent=gene-NND05_06720;Dbxref=NCBI_GP:MCP9537252.1;Name=MCP9537252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007765242.1;locus_tag=NND05_06720;product=AAA family ATPase;protein_id=MCP9537252.1;transl_table=11 JANDXE010000010.1 Genbank gene 61846 62340 . - . ID=gene-NND05_06725;Name=NND05_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06725 JANDXE010000010.1 Protein Homology CDS 61846 62340 . - 0 ID=cds-MCP9537253.1;Parent=gene-NND05_06725;Dbxref=NCBI_GP:MCP9537253.1;Name=MCP9537253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009037635.1;locus_tag=NND05_06725;product=3'-5' exonuclease;protein_id=MCP9537253.1;transl_table=11 JANDXE010000010.1 Genbank gene 62337 63344 . - . ID=gene-NND05_06730;Name=NND05_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06730 JANDXE010000010.1 GeneMarkS-2+ CDS 62337 63344 . - 0 ID=cds-MCP9537254.1;Parent=gene-NND05_06730;Dbxref=NCBI_GP:MCP9537254.1;Name=MCP9537254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06730;product=hypothetical protein;protein_id=MCP9537254.1;transl_table=11 JANDXE010000010.1 Genbank gene 63604 64911 . + . ID=gene-NND05_06735;Name=NND05_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06735 JANDXE010000010.1 Protein Homology CDS 63604 64911 . + 0 ID=cds-MCP9537255.1;Parent=gene-NND05_06735;Dbxref=NCBI_GP:MCP9537255.1;Name=MCP9537255.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015382.2;locus_tag=NND05_06735;product=carcinine hydrolase/isopenicillin-N N-acyltransferase family protein;protein_id=MCP9537255.1;transl_table=11 JANDXE010000010.1 Genbank gene 64969 66504 . + . ID=gene-NND05_06740;Name=NND05_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06740 JANDXE010000010.1 GeneMarkS-2+ CDS 64969 66504 . + 0 ID=cds-MCP9537256.1;Parent=gene-NND05_06740;Dbxref=NCBI_GP:MCP9537256.1;Name=MCP9537256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06740;product=hypothetical protein;protein_id=MCP9537256.1;transl_table=11 JANDXE010000010.1 Genbank gene 66987 67481 . + . ID=gene-NND05_06745;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=NND05_06745 JANDXE010000010.1 Protein Homology CDS 66987 67481 . + 0 ID=cds-MCP9537257.1;Parent=gene-NND05_06745;Dbxref=NCBI_GP:MCP9537257.1;Name=MCP9537257.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434925.1;locus_tag=NND05_06745;product=flavodoxin FldA;protein_id=MCP9537257.1;transl_table=11 JANDXE010000010.1 Genbank gene 67612 67965 . + . ID=gene-NND05_06750;Name=NND05_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06750 JANDXE010000010.1 Protein Homology CDS 67612 67965 . + 0 ID=cds-MCP9537258.1;Parent=gene-NND05_06750;Dbxref=NCBI_GP:MCP9537258.1;Name=MCP9537258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368172.1;locus_tag=NND05_06750;product=DUF2023 family protein;protein_id=MCP9537258.1;transl_table=11 JANDXE010000010.1 Genbank gene 68247 69626 . + . ID=gene-NND05_06755;Name=NND05_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06755 JANDXE010000010.1 Protein Homology CDS 68247 69626 . + 0 ID=cds-MCP9537259.1;Parent=gene-NND05_06755;Dbxref=NCBI_GP:MCP9537259.1;Name=MCP9537259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004363979.1;locus_tag=NND05_06755;product=AAA family ATPase;protein_id=MCP9537259.1;transl_table=11 JANDXE010000010.1 Genbank gene 69686 72919 . - . ID=gene-NND05_06760;Name=NND05_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06760 JANDXE010000010.1 Protein Homology CDS 69686 72919 . - 0 ID=cds-MCP9537260.1;Parent=gene-NND05_06760;Dbxref=NCBI_GP:MCP9537260.1;Name=MCP9537260.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709509.1;locus_tag=NND05_06760;product=S41 family peptidase;protein_id=MCP9537260.1;transl_table=11 JANDXE010000010.1 Genbank gene 73181 77569 . + . ID=gene-NND05_06765;Name=NND05_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06765 JANDXE010000010.1 Protein Homology CDS 73181 77569 . + 0 ID=cds-MCP9537261.1;Parent=gene-NND05_06765;Dbxref=NCBI_GP:MCP9537261.1;Name=MCP9537261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848397.1;locus_tag=NND05_06765;product=cobaltochelatase subunit CobN;protein_id=MCP9537261.1;transl_table=11 JANDXE010000010.1 Genbank gene 77616 78305 . + . ID=gene-NND05_06770;Name=NND05_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06770 JANDXE010000010.1 Protein Homology CDS 77616 78305 . + 0 ID=cds-MCP9537262.1;Parent=gene-NND05_06770;Dbxref=NCBI_GP:MCP9537262.1;Name=MCP9537262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225390.1;locus_tag=NND05_06770;product=hypothetical protein;protein_id=MCP9537262.1;transl_table=11 JANDXE010000010.1 Genbank gene 78305 78898 . + . ID=gene-NND05_06775;Name=NND05_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06775 JANDXE010000010.1 Protein Homology CDS 78305 78898 . + 0 ID=cds-MCP9537263.1;Parent=gene-NND05_06775;Dbxref=NCBI_GP:MCP9537263.1;Name=MCP9537263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008668036.1;locus_tag=NND05_06775;product=MotA/TolQ/ExbB proton channel family protein;protein_id=MCP9537263.1;transl_table=11 JANDXE010000010.1 Genbank gene 78922 79266 . + . ID=gene-NND05_06780;Name=NND05_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06780 JANDXE010000010.1 Protein Homology CDS 78922 79266 . + 0 ID=cds-MCP9537264.1;Parent=gene-NND05_06780;Dbxref=NCBI_GP:MCP9537264.1;Name=MCP9537264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848394.1;locus_tag=NND05_06780;product=DUF2149 domain-containing protein;protein_id=MCP9537264.1;transl_table=11 JANDXE010000010.1 Genbank gene 79389 79868 . + . ID=gene-NND05_06785;Name=NND05_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06785 JANDXE010000010.1 Protein Homology CDS 79389 79868 . + 0 ID=cds-MCP9537265.1;Parent=gene-NND05_06785;Dbxref=NCBI_GP:MCP9537265.1;Name=MCP9537265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025312.2;locus_tag=NND05_06785;product=calycin-like domain-containing protein;protein_id=MCP9537265.1;transl_table=11 JANDXE010000010.1 Genbank gene 79904 82078 . + . ID=gene-NND05_06790;Name=NND05_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06790 JANDXE010000010.1 Protein Homology CDS 79904 82078 . + 0 ID=cds-MCP9537266.1;Parent=gene-NND05_06790;Dbxref=NCBI_GP:MCP9537266.1;Name=MCP9537266.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_06790;product=TonB-dependent receptor;protein_id=MCP9537266.1;transl_table=11 JANDXE010000010.1 Genbank gene 82216 83847 . + . ID=gene-NND05_06795;Name=NND05_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06795 JANDXE010000010.1 Protein Homology CDS 82216 83847 . + 0 ID=cds-MCP9537267.1;Parent=gene-NND05_06795;Dbxref=NCBI_GP:MCP9537267.1;Name=MCP9537267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227753.1;locus_tag=NND05_06795;product=beta-N-acetylhexosaminidase;protein_id=MCP9537267.1;transl_table=11 JANDXE010000010.1 Genbank gene 83988 85016 . - . ID=gene-NND05_06800;Name=NND05_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06800 JANDXE010000010.1 GeneMarkS-2+ CDS 83988 85016 . - 0 ID=cds-MCP9537268.1;Parent=gene-NND05_06800;Dbxref=NCBI_GP:MCP9537268.1;Name=MCP9537268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06800;product=hypothetical protein;protein_id=MCP9537268.1;transl_table=11 JANDXE010000010.1 Genbank gene 85073 86737 . - . ID=gene-NND05_06805;Name=NND05_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06805 JANDXE010000010.1 Protein Homology CDS 85073 86737 . - 0 ID=cds-MCP9537269.1;Parent=gene-NND05_06805;Dbxref=NCBI_GP:MCP9537269.1;Name=MCP9537269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849132.1;locus_tag=NND05_06805;product=ATP-binding protein;protein_id=MCP9537269.1;transl_table=11 JANDXE010000010.1 Genbank gene 86742 86987 . - . ID=gene-NND05_06810;Name=NND05_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06810 JANDXE010000010.1 GeneMarkS-2+ CDS 86742 86987 . - 0 ID=cds-MCP9537270.1;Parent=gene-NND05_06810;Dbxref=NCBI_GP:MCP9537270.1;Name=MCP9537270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06810;product=hypothetical protein;protein_id=MCP9537270.1;transl_table=11 JANDXE010000010.1 Genbank gene 86968 87492 . - . ID=gene-NND05_06815;Name=NND05_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06815 JANDXE010000010.1 GeneMarkS-2+ CDS 86968 87492 . - 0 ID=cds-MCP9537271.1;Parent=gene-NND05_06815;Dbxref=NCBI_GP:MCP9537271.1;Name=MCP9537271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06815;product=hypothetical protein;protein_id=MCP9537271.1;transl_table=11 JANDXE010000010.1 Genbank gene 87674 88624 . - . ID=gene-NND05_06820;Name=NND05_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06820 JANDXE010000010.1 GeneMarkS-2+ CDS 87674 88624 . - 0 ID=cds-MCP9537272.1;Parent=gene-NND05_06820;Dbxref=NCBI_GP:MCP9537272.1;Name=MCP9537272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06820;product=hypothetical protein;protein_id=MCP9537272.1;transl_table=11 JANDXE010000010.1 Genbank gene 88693 89904 . - . ID=gene-NND05_06825;Name=NND05_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06825 JANDXE010000010.1 GeneMarkS-2+ CDS 88693 89904 . - 0 ID=cds-MCP9537273.1;Parent=gene-NND05_06825;Dbxref=NCBI_GP:MCP9537273.1;Name=MCP9537273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06825;product=hypothetical protein;protein_id=MCP9537273.1;transl_table=11 JANDXE010000010.1 Genbank gene 89938 91194 . - . ID=gene-NND05_06830;Name=NND05_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06830 JANDXE010000010.1 Protein Homology CDS 89938 91194 . - 0 ID=cds-MCP9537274.1;Parent=gene-NND05_06830;Dbxref=NCBI_GP:MCP9537274.1;Name=MCP9537274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025639.2;locus_tag=NND05_06830;product=PD-(D/E)XK nuclease family protein;protein_id=MCP9537274.1;transl_table=11 JANDXE010000010.1 Genbank gene 91251 91556 . - . ID=gene-NND05_06835;Name=NND05_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06835 JANDXE010000010.1 GeneMarkS-2+ CDS 91251 91556 . - 0 ID=cds-MCP9537275.1;Parent=gene-NND05_06835;Dbxref=NCBI_GP:MCP9537275.1;Name=MCP9537275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06835;product=hypothetical protein;protein_id=MCP9537275.1;transl_table=11 JANDXE010000010.1 Genbank gene 91556 91825 . - . ID=gene-NND05_06840;Name=NND05_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06840 JANDXE010000010.1 GeneMarkS-2+ CDS 91556 91825 . - 0 ID=cds-MCP9537276.1;Parent=gene-NND05_06840;Dbxref=NCBI_GP:MCP9537276.1;Name=MCP9537276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06840;product=hypothetical protein;protein_id=MCP9537276.1;transl_table=11 JANDXE010000010.1 Genbank gene 91915 92334 . - . ID=gene-NND05_06845;Name=NND05_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06845 JANDXE010000010.1 GeneMarkS-2+ CDS 91915 92334 . - 0 ID=cds-MCP9537277.1;Parent=gene-NND05_06845;Dbxref=NCBI_GP:MCP9537277.1;Name=MCP9537277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06845;product=hypothetical protein;protein_id=MCP9537277.1;transl_table=11 JANDXE010000010.1 Genbank gene 92381 93574 . - . ID=gene-NND05_06850;Name=NND05_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06850 JANDXE010000010.1 Protein Homology CDS 92381 93574 . - 0 ID=cds-MCP9537278.1;Parent=gene-NND05_06850;Dbxref=NCBI_GP:MCP9537278.1;Name=MCP9537278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024813.2;locus_tag=NND05_06850;product=GYF domain-containing protein;protein_id=MCP9537278.1;transl_table=11 JANDXE010000010.1 Genbank gene 93651 96470 . - . ID=gene-NND05_06855;Name=NND05_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06855 JANDXE010000010.1 GeneMarkS-2+ CDS 93651 96470 . - 0 ID=cds-MCP9537279.1;Parent=gene-NND05_06855;Dbxref=NCBI_GP:MCP9537279.1;Name=MCP9537279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06855;product=hypothetical protein;protein_id=MCP9537279.1;transl_table=11 JANDXE010000010.1 Genbank gene 96523 99348 . - . ID=gene-NND05_06860;Name=NND05_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06860 JANDXE010000010.1 GeneMarkS-2+ CDS 96523 99348 . - 0 ID=cds-MCP9537280.1;Parent=gene-NND05_06860;Dbxref=NCBI_GP:MCP9537280.1;Name=MCP9537280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06860;product=zinc-ribbon domain-containing protein;protein_id=MCP9537280.1;transl_table=11 JANDXE010000010.1 Genbank gene 100020 100844 . - . ID=gene-NND05_06865;Name=NND05_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06865 JANDXE010000010.1 Protein Homology CDS 100020 100844 . - 0 ID=cds-MCP9537281.1;Parent=gene-NND05_06865;Dbxref=NCBI_GP:MCP9537281.1;Name=MCP9537281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347731.1;locus_tag=NND05_06865;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=MCP9537281.1;transl_table=11 JANDXE010000010.1 Genbank gene 100837 101466 . - . ID=gene-NND05_06870;Name=NND05_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06870 JANDXE010000010.1 Protein Homology CDS 100837 101466 . - 0 ID=cds-MCP9537282.1;Parent=gene-NND05_06870;Dbxref=NCBI_GP:MCP9537282.1;Name=MCP9537282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009041103.1;locus_tag=NND05_06870;product=hypothetical protein;protein_id=MCP9537282.1;transl_table=11 JANDXE010000010.1 Genbank gene 104129 104508 . + . ID=gene-NND05_06875;Name=NND05_06875;end_range=104508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06875;partial=true JANDXE010000010.1 Protein Homology CDS 104129 104508 . + 0 ID=cds-MCP9537283.1;Parent=gene-NND05_06875;Dbxref=NCBI_GP:MCP9537283.1;Name=MCP9537283.1;end_range=104508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015532459.1;locus_tag=NND05_06875;partial=true;product=Arm DNA-binding domain-containing protein;protein_id=MCP9537283.1;transl_table=11 ##sequence-region JANDXE010000011.1 1 102627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000011.1 Genbank region 1 102627 . + . ID=JANDXE010000011.1:1..102627;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000011.1 Genbank gene 690 1016 . - . ID=gene-NND05_06880;Name=NND05_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06880 JANDXE010000011.1 GeneMarkS-2+ CDS 690 1016 . - 0 ID=cds-MCP9537284.1;Parent=gene-NND05_06880;Dbxref=NCBI_GP:MCP9537284.1;Name=MCP9537284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06880;product=hypothetical protein;protein_id=MCP9537284.1;transl_table=11 JANDXE010000011.1 Genbank gene 1021 1584 . - . ID=gene-NND05_06885;Name=NND05_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06885 JANDXE010000011.1 Protein Homology CDS 1021 1584 . - 0 ID=cds-MCP9537285.1;Parent=gene-NND05_06885;Dbxref=NCBI_GP:MCP9537285.1;Name=MCP9537285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898986.1;locus_tag=NND05_06885;product=CatB-related O-acetyltransferase;protein_id=MCP9537285.1;transl_table=11 JANDXE010000011.1 Genbank gene 1581 2396 . - . ID=gene-NND05_06890;Name=NND05_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06890 JANDXE010000011.1 Protein Homology CDS 1581 2396 . - 0 ID=cds-MCP9537286.1;Parent=gene-NND05_06890;Dbxref=NCBI_GP:MCP9537286.1;Name=MCP9537286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016377.2;locus_tag=NND05_06890;product=glycosyl transferase;protein_id=MCP9537286.1;transl_table=11 JANDXE010000011.1 Genbank gene 2393 3775 . - . ID=gene-NND05_06895;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=protein_coding;locus_tag=NND05_06895 JANDXE010000011.1 Protein Homology CDS 2393 3775 . - 0 ID=cds-MCP9537287.1;Parent=gene-NND05_06895;Dbxref=NCBI_GP:MCP9537287.1;Name=MCP9537287.1;gbkey=CDS;gene=wzy;inference=COORDINATES: protein motif:HMM:NF025654.2;locus_tag=NND05_06895;product=O-antigen polysaccharide polymerase Wzy;protein_id=MCP9537287.1;transl_table=11 JANDXE010000011.1 Genbank gene 3849 4760 . - . ID=gene-NND05_06900;Name=NND05_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06900 JANDXE010000011.1 Protein Homology CDS 3849 4760 . - 0 ID=cds-MCP9537288.1;Parent=gene-NND05_06900;Dbxref=NCBI_GP:MCP9537288.1;Name=MCP9537288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=NND05_06900;product=glycosyltransferase family 2 protein;protein_id=MCP9537288.1;transl_table=11 JANDXE010000011.1 Genbank gene 4855 5985 . - . ID=gene-NND05_06905;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=NND05_06905 JANDXE010000011.1 Protein Homology CDS 4855 5985 . - 0 ID=cds-MCP9537289.1;Parent=gene-NND05_06905;Dbxref=NCBI_GP:MCP9537289.1;Name=MCP9537289.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462557.1;locus_tag=NND05_06905;product=UDP-galactopyranose mutase;protein_id=MCP9537289.1;transl_table=11 JANDXE010000011.1 Genbank gene 5994 6944 . - . ID=gene-NND05_06910;Name=NND05_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06910 JANDXE010000011.1 Protein Homology CDS 5994 6944 . - 0 ID=cds-MCP9537290.1;Parent=gene-NND05_06910;Dbxref=NCBI_GP:MCP9537290.1;Name=MCP9537290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NND05_06910;product=glycosyltransferase;protein_id=MCP9537290.1;transl_table=11 JANDXE010000011.1 Genbank gene 7454 7960 . - . ID=gene-NND05_06915;Name=NND05_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06915 JANDXE010000011.1 Protein Homology CDS 7454 7960 . - 0 ID=cds-MCP9537291.1;Parent=gene-NND05_06915;Dbxref=NCBI_GP:MCP9537291.1;Name=MCP9537291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=NND05_06915;product=acyltransferase;protein_id=MCP9537291.1;transl_table=11 JANDXE010000011.1 Genbank gene 7944 9134 . - . ID=gene-NND05_06920;Name=NND05_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06920 JANDXE010000011.1 Protein Homology CDS 7944 9134 . - 0 ID=cds-MCP9537292.1;Parent=gene-NND05_06920;Dbxref=NCBI_GP:MCP9537292.1;Name=MCP9537292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=NND05_06920;product=polysaccharide pyruvyl transferase family protein;protein_id=MCP9537292.1;transl_table=11 JANDXE010000011.1 Genbank gene 9153 10178 . - . ID=gene-NND05_06925;Name=NND05_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06925 JANDXE010000011.1 Protein Homology CDS 9153 10178 . - 0 ID=cds-MCP9537293.1;Parent=gene-NND05_06925;Dbxref=NCBI_GP:MCP9537293.1;Name=MCP9537293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=NND05_06925;product=nitroreductase family protein;protein_id=MCP9537293.1;transl_table=11 JANDXE010000011.1 Genbank gene 10181 11434 . - . ID=gene-NND05_06930;Name=NND05_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06930 JANDXE010000011.1 GeneMarkS-2+ CDS 10181 11434 . - 0 ID=cds-MCP9537294.1;Parent=gene-NND05_06930;Dbxref=NCBI_GP:MCP9537294.1;Name=MCP9537294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06930;product=hypothetical protein;protein_id=MCP9537294.1;transl_table=11 JANDXE010000011.1 Genbank gene 11437 12969 . - . ID=gene-NND05_06935;Name=NND05_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06935 JANDXE010000011.1 Protein Homology CDS 11437 12969 . - 0 ID=cds-MCP9537295.1;Parent=gene-NND05_06935;Dbxref=NCBI_GP:MCP9537295.1;Name=MCP9537295.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014051.2;locus_tag=NND05_06935;product=oligosaccharide flippase family protein;protein_id=MCP9537295.1;transl_table=11 JANDXE010000011.1 Genbank pseudogene 13017 13148 . - . ID=gene-NND05_06940;Name=NND05_06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_06940;pseudo=true JANDXE010000011.1 Protein Homology CDS 13017 13148 . - 0 ID=cds-NND05_06940;Parent=gene-NND05_06940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618899.1;locus_tag=NND05_06940;product=mannose-1-phosphate guanylyltransferase;pseudo=true;transl_table=11 JANDXE010000011.1 Genbank gene 13222 13464 . - . ID=gene-NND05_06945;Name=NND05_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06945 JANDXE010000011.1 GeneMarkS-2+ CDS 13222 13464 . - 0 ID=cds-MCP9537296.1;Parent=gene-NND05_06945;Dbxref=NCBI_GP:MCP9537296.1;Name=MCP9537296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06945;product=hypothetical protein;protein_id=MCP9537296.1;transl_table=11 JANDXE010000011.1 Genbank gene 14219 14932 . - . ID=gene-NND05_06950;Name=NND05_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06950 JANDXE010000011.1 GeneMarkS-2+ CDS 14219 14932 . - 0 ID=cds-MCP9537297.1;Parent=gene-NND05_06950;Dbxref=NCBI_GP:MCP9537297.1;Name=MCP9537297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06950;product=hypothetical protein;protein_id=MCP9537297.1;transl_table=11 JANDXE010000011.1 Genbank gene 14935 16926 . - . ID=gene-NND05_06955;Name=NND05_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06955 JANDXE010000011.1 Protein Homology CDS 14935 16926 . - 0 ID=cds-MCP9537298.1;Parent=gene-NND05_06955;Dbxref=NCBI_GP:MCP9537298.1;Name=MCP9537298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024642.2;locus_tag=NND05_06955;product=ATP-binding domain-containing protein;protein_id=MCP9537298.1;transl_table=11 JANDXE010000011.1 Genbank gene 16974 17369 . - . ID=gene-NND05_06960;Name=NND05_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06960 JANDXE010000011.1 GeneMarkS-2+ CDS 16974 17369 . - 0 ID=cds-MCP9537299.1;Parent=gene-NND05_06960;Dbxref=NCBI_GP:MCP9537299.1;Name=MCP9537299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06960;product=hypothetical protein;protein_id=MCP9537299.1;transl_table=11 JANDXE010000011.1 Genbank gene 17868 18071 . - . ID=gene-NND05_06965;Name=NND05_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06965 JANDXE010000011.1 GeneMarkS-2+ CDS 17868 18071 . - 0 ID=cds-MCP9537300.1;Parent=gene-NND05_06965;Dbxref=NCBI_GP:MCP9537300.1;Name=MCP9537300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06965;product=hypothetical protein;protein_id=MCP9537300.1;transl_table=11 JANDXE010000011.1 Genbank gene 19407 19574 . - . ID=gene-NND05_06970;Name=NND05_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06970 JANDXE010000011.1 GeneMarkS-2+ CDS 19407 19574 . - 0 ID=cds-MCP9537301.1;Parent=gene-NND05_06970;Dbxref=NCBI_GP:MCP9537301.1;Name=MCP9537301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06970;product=ABC transporter ATP-binding protein;protein_id=MCP9537301.1;transl_table=11 JANDXE010000011.1 Genbank gene 19596 20231 . - . ID=gene-NND05_06975;Name=NND05_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06975 JANDXE010000011.1 GeneMarkS-2+ CDS 19596 20231 . - 0 ID=cds-MCP9537302.1;Parent=gene-NND05_06975;Dbxref=NCBI_GP:MCP9537302.1;Name=MCP9537302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06975;product=hypothetical protein;protein_id=MCP9537302.1;transl_table=11 JANDXE010000011.1 Genbank gene 20244 20774 . - . ID=gene-NND05_06980;Name=NND05_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06980 JANDXE010000011.1 GeneMarkS-2+ CDS 20244 20774 . - 0 ID=cds-MCP9537303.1;Parent=gene-NND05_06980;Dbxref=NCBI_GP:MCP9537303.1;Name=MCP9537303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06980;product=hypothetical protein;protein_id=MCP9537303.1;transl_table=11 JANDXE010000011.1 Genbank gene 21383 21541 . - . ID=gene-NND05_06985;Name=NND05_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06985 JANDXE010000011.1 GeneMarkS-2+ CDS 21383 21541 . - 0 ID=cds-MCP9537304.1;Parent=gene-NND05_06985;Dbxref=NCBI_GP:MCP9537304.1;Name=MCP9537304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06985;product=hypothetical protein;protein_id=MCP9537304.1;transl_table=11 JANDXE010000011.1 Genbank gene 22112 24367 . + . ID=gene-NND05_06990;Name=NND05_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06990 JANDXE010000011.1 Protein Homology CDS 22112 24367 . + 0 ID=cds-MCP9537305.1;Parent=gene-NND05_06990;Dbxref=NCBI_GP:MCP9537305.1;Name=MCP9537305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017116.2;locus_tag=NND05_06990;product=hypothetical protein;protein_id=MCP9537305.1;transl_table=11 JANDXE010000011.1 Genbank gene 24600 24809 . + . ID=gene-NND05_06995;Name=NND05_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06995 JANDXE010000011.1 Protein Homology CDS 24600 24809 . + 0 ID=cds-MCP9537306.1;Parent=gene-NND05_06995;Dbxref=NCBI_GP:MCP9537306.1;Name=MCP9537306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846942.1;locus_tag=NND05_06995;product=DUF4248 domain-containing protein;protein_id=MCP9537306.1;transl_table=11 JANDXE010000011.1 Genbank gene 25072 25587 . + . ID=gene-NND05_07000;Name=NND05_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07000 JANDXE010000011.1 Protein Homology CDS 25072 25587 . + 0 ID=cds-MCP9537307.1;Parent=gene-NND05_07000;Dbxref=NCBI_GP:MCP9537307.1;Name=MCP9537307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846745.1;locus_tag=NND05_07000;product=DNA-binding protein;protein_id=MCP9537307.1;transl_table=11 JANDXE010000011.1 Genbank gene 25924 26019 . + . ID=gene-NND05_07005;Name=NND05_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07005 JANDXE010000011.1 Protein Homology CDS 25924 26019 . + 0 ID=cds-MCP9537308.1;Parent=gene-NND05_07005;Dbxref=NCBI_GP:MCP9537308.1;Name=MCP9537308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033879.1;locus_tag=NND05_07005;product=smalltalk protein;protein_id=MCP9537308.1;transl_table=11 JANDXE010000011.1 Genbank gene 26044 26418 . - . ID=gene-NND05_07010;Name=NND05_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07010 JANDXE010000011.1 Protein Homology CDS 26044 26418 . - 0 ID=cds-MCP9537309.1;Parent=gene-NND05_07010;Dbxref=NCBI_GP:MCP9537309.1;Name=MCP9537309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846867.1;locus_tag=NND05_07010;product=GxxExxY protein;protein_id=MCP9537309.1;transl_table=11 JANDXE010000011.1 Genbank gene 26736 27170 . + . ID=gene-NND05_07015;Name=NND05_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07015 JANDXE010000011.1 Protein Homology CDS 26736 27170 . + 0 ID=cds-MCP9537310.1;Parent=gene-NND05_07015;Dbxref=NCBI_GP:MCP9537310.1;Name=MCP9537310.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847758.1;locus_tag=NND05_07015;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9537310.1;transl_table=11 JANDXE010000011.1 Genbank gene 27907 28050 . + . ID=gene-NND05_07020;Name=NND05_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07020 JANDXE010000011.1 GeneMarkS-2+ CDS 27907 28050 . + 0 ID=cds-MCP9537311.1;Parent=gene-NND05_07020;Dbxref=NCBI_GP:MCP9537311.1;Name=MCP9537311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07020;product=hypothetical protein;protein_id=MCP9537311.1;transl_table=11 JANDXE010000011.1 Genbank gene 28017 28523 . - . ID=gene-NND05_07025;Name=NND05_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07025 JANDXE010000011.1 Protein Homology CDS 28017 28523 . - 0 ID=cds-MCP9537312.1;Parent=gene-NND05_07025;Dbxref=NCBI_GP:MCP9537312.1;Name=MCP9537312.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NND05_07025;product=MFS transporter;protein_id=MCP9537312.1;transl_table=11 JANDXE010000011.1 Genbank gene 28566 29795 . - . ID=gene-NND05_07030;Name=NND05_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07030 JANDXE010000011.1 Protein Homology CDS 28566 29795 . - 0 ID=cds-MCP9537313.1;Parent=gene-NND05_07030;Dbxref=NCBI_GP:MCP9537313.1;Name=MCP9537313.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013446387.1;locus_tag=NND05_07030;product=adenylyltransferase/cytidyltransferase family protein;protein_id=MCP9537313.1;transl_table=11 JANDXE010000011.1 Genbank gene 30209 31138 . - . ID=gene-NND05_07035;Name=NND05_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07035 JANDXE010000011.1 Protein Homology CDS 30209 31138 . - 0 ID=cds-MCP9537314.1;Parent=gene-NND05_07035;Dbxref=NCBI_GP:MCP9537314.1;Name=MCP9537314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008654332.1;locus_tag=NND05_07035;product=virulence RhuM family protein;protein_id=MCP9537314.1;transl_table=11 JANDXE010000011.1 Genbank gene 32041 32385 . - . ID=gene-NND05_07040;Name=NND05_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07040 JANDXE010000011.1 Protein Homology CDS 32041 32385 . - 0 ID=cds-MCP9537315.1;Parent=gene-NND05_07040;Dbxref=NCBI_GP:MCP9537315.1;Name=MCP9537315.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354715.1;locus_tag=NND05_07040;product=aspartate 1-decarboxylase;protein_id=MCP9537315.1;transl_table=11 JANDXE010000011.1 Genbank gene 32397 33248 . - . ID=gene-NND05_07045;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NND05_07045 JANDXE010000011.1 Protein Homology CDS 32397 33248 . - 0 ID=cds-MCP9537316.1;Parent=gene-NND05_07045;Dbxref=NCBI_GP:MCP9537316.1;Name=MCP9537316.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006045960.1;locus_tag=NND05_07045;product=pantoate--beta-alanine ligase;protein_id=MCP9537316.1;transl_table=11 JANDXE010000011.1 Genbank gene 33421 34233 . + . ID=gene-NND05_07050;Name=NND05_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07050 JANDXE010000011.1 Protein Homology CDS 33421 34233 . + 0 ID=cds-MCP9537317.1;Parent=gene-NND05_07050;Dbxref=NCBI_GP:MCP9537317.1;Name=MCP9537317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846912.1;locus_tag=NND05_07050;product=glycogen/starch synthase;protein_id=MCP9537317.1;transl_table=11 JANDXE010000011.1 Genbank gene 34264 35733 . + . ID=gene-NND05_07055;Name=NND05_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07055 JANDXE010000011.1 Protein Homology CDS 34264 35733 . + 0 ID=cds-MCP9537318.1;Parent=gene-NND05_07055;Dbxref=NCBI_GP:MCP9537318.1;Name=MCP9537318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025458.2;locus_tag=NND05_07055;product=DUF4270 domain-containing protein;protein_id=MCP9537318.1;transl_table=11 JANDXE010000011.1 Genbank gene 35738 35869 . + . ID=gene-NND05_07060;Name=NND05_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07060 JANDXE010000011.1 Protein Homology CDS 35738 35869 . + 0 ID=cds-MCP9537319.1;Parent=gene-NND05_07060;Dbxref=NCBI_GP:MCP9537319.1;Name=MCP9537319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367858.1;locus_tag=NND05_07060;product=dehydrogenase;protein_id=MCP9537319.1;transl_table=11 JANDXE010000011.1 Genbank gene 35956 38331 . - . ID=gene-NND05_07065;Name=NND05_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07065 JANDXE010000011.1 Protein Homology CDS 35956 38331 . - 0 ID=cds-MCP9537320.1;Parent=gene-NND05_07065;Dbxref=NCBI_GP:MCP9537320.1;Name=MCP9537320.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846917.1;locus_tag=NND05_07065;product=UvrD-helicase domain-containing protein;protein_id=MCP9537320.1;transl_table=11 JANDXE010000011.1 Genbank gene 38630 39364 . - . ID=gene-NND05_07070;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=NND05_07070 JANDXE010000011.1 Protein Homology CDS 38630 39364 . - 0 ID=cds-MCP9537321.1;Parent=gene-NND05_07070;Dbxref=NCBI_GP:MCP9537321.1;Name=MCP9537321.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846918.1;locus_tag=NND05_07070;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=MCP9537321.1;transl_table=11 JANDXE010000011.1 Genbank gene 39403 40092 . - . ID=gene-NND05_07075;Name=NND05_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07075 JANDXE010000011.1 Protein Homology CDS 39403 40092 . - 0 ID=cds-MCP9537322.1;Parent=gene-NND05_07075;Dbxref=NCBI_GP:MCP9537322.1;Name=MCP9537322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340910.1;locus_tag=NND05_07075;product=OmpA family protein;protein_id=MCP9537322.1;transl_table=11 JANDXE010000011.1 Genbank gene 40343 41824 . + . ID=gene-NND05_07080;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=NND05_07080 JANDXE010000011.1 Protein Homology CDS 40343 41824 . + 0 ID=cds-MCP9537323.1;Parent=gene-NND05_07080;Dbxref=NCBI_GP:MCP9537323.1;Name=MCP9537323.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911264.1;locus_tag=NND05_07080;product=proline--tRNA ligase;protein_id=MCP9537323.1;transl_table=11 JANDXE010000011.1 Genbank gene 41859 42227 . + . ID=gene-NND05_07085;Name=NND05_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07085 JANDXE010000011.1 GeneMarkS-2+ CDS 41859 42227 . + 0 ID=cds-MCP9537324.1;Parent=gene-NND05_07085;Dbxref=NCBI_GP:MCP9537324.1;Name=MCP9537324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07085;product=hypothetical protein;protein_id=MCP9537324.1;transl_table=11 JANDXE010000011.1 Genbank gene 42486 42878 . + . ID=gene-NND05_07090;Name=NND05_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07090 JANDXE010000011.1 GeneMarkS-2+ CDS 42486 42878 . + 0 ID=cds-MCP9537325.1;Parent=gene-NND05_07090;Dbxref=NCBI_GP:MCP9537325.1;Name=MCP9537325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07090;product=hypothetical protein;protein_id=MCP9537325.1;transl_table=11 JANDXE010000011.1 Genbank gene 42980 43933 . - . ID=gene-NND05_07095;Name=NND05_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07095 JANDXE010000011.1 Protein Homology CDS 42980 43933 . - 0 ID=cds-MCP9537326.1;Parent=gene-NND05_07095;Dbxref=NCBI_GP:MCP9537326.1;Name=MCP9537326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369922.1;locus_tag=NND05_07095;product=DNA/RNA non-specific endonuclease;protein_id=MCP9537326.1;transl_table=11 JANDXE010000011.1 Genbank gene 44017 45549 . - . ID=gene-NND05_07100;Name=NND05_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07100 JANDXE010000011.1 Protein Homology CDS 44017 45549 . - 0 ID=cds-MCP9537327.1;Parent=gene-NND05_07100;Dbxref=NCBI_GP:MCP9537327.1;Name=MCP9537327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065084.1;locus_tag=NND05_07100;product=BACON domain-containing protein;protein_id=MCP9537327.1;transl_table=11 JANDXE010000011.1 Genbank gene 45569 48886 . - . ID=gene-NND05_07105;Name=NND05_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07105 JANDXE010000011.1 Protein Homology CDS 45569 48886 . - 0 ID=cds-MCP9537328.1;Parent=gene-NND05_07105;Dbxref=NCBI_GP:MCP9537328.1;Name=MCP9537328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846903.1;locus_tag=NND05_07105;product=carboxypeptidase regulatory-like domain-containing protein;protein_id=MCP9537328.1;transl_table=11 JANDXE010000011.1 Genbank gene 49106 50305 . - . ID=gene-NND05_07110;Name=NND05_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07110 JANDXE010000011.1 Protein Homology CDS 49106 50305 . - 0 ID=cds-MCP9537329.1;Parent=gene-NND05_07110;Dbxref=NCBI_GP:MCP9537329.1;Name=MCP9537329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919821.1;locus_tag=NND05_07110;product=ABC transporter permease;protein_id=MCP9537329.1;transl_table=11 JANDXE010000011.1 Genbank gene 50302 50946 . - . ID=gene-NND05_07115;Name=NND05_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07115 JANDXE010000011.1 Protein Homology CDS 50302 50946 . - 0 ID=cds-MCP9537330.1;Parent=gene-NND05_07115;Dbxref=NCBI_GP:MCP9537330.1;Name=MCP9537330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919820.1;locus_tag=NND05_07115;product=ATP-binding cassette domain-containing protein;protein_id=MCP9537330.1;transl_table=11 JANDXE010000011.1 Genbank gene 51007 52365 . - . ID=gene-NND05_07120;Name=NND05_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07120 JANDXE010000011.1 Protein Homology CDS 51007 52365 . - 0 ID=cds-MCP9537331.1;Parent=gene-NND05_07120;Dbxref=NCBI_GP:MCP9537331.1;Name=MCP9537331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919819.1;locus_tag=NND05_07120;product=DUF4836 family protein;protein_id=MCP9537331.1;transl_table=11 JANDXE010000011.1 Genbank gene 52556 53323 . - . ID=gene-NND05_07125;Name=NND05_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07125 JANDXE010000011.1 Protein Homology CDS 52556 53323 . - 0 ID=cds-MCP9537332.1;Parent=gene-NND05_07125;Dbxref=NCBI_GP:MCP9537332.1;Name=MCP9537332.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919818.1;locus_tag=NND05_07125;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=MCP9537332.1;transl_table=11 JANDXE010000011.1 Genbank gene 53351 53920 . - . ID=gene-NND05_07130;Name=NND05_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07130 JANDXE010000011.1 Protein Homology CDS 53351 53920 . - 0 ID=cds-MCP9537333.1;Parent=gene-NND05_07130;Dbxref=NCBI_GP:MCP9537333.1;Name=MCP9537333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014618.2;locus_tag=NND05_07130;product=UvrB/UvrC motif-containing protein;protein_id=MCP9537333.1;transl_table=11 JANDXE010000011.1 Genbank gene 53926 55218 . - . ID=gene-NND05_07135;Name=NND05_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07135 JANDXE010000011.1 Protein Homology CDS 53926 55218 . - 0 ID=cds-MCP9537334.1;Parent=gene-NND05_07135;Dbxref=NCBI_GP:MCP9537334.1;Name=MCP9537334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359973.1;locus_tag=NND05_07135;product=MFS transporter;protein_id=MCP9537334.1;transl_table=11 JANDXE010000011.1 Genbank gene 55430 55963 . + . ID=gene-NND05_07140;Name=NND05_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07140 JANDXE010000011.1 Protein Homology CDS 55430 55963 . + 0 ID=cds-MCP9537335.1;Parent=gene-NND05_07140;Dbxref=NCBI_GP:MCP9537335.1;Name=MCP9537335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009348227.1;locus_tag=NND05_07140;product=chromate transporter;protein_id=MCP9537335.1;transl_table=11 JANDXE010000011.1 Genbank gene 56007 56579 . + . ID=gene-NND05_07145;Name=NND05_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07145 JANDXE010000011.1 Protein Homology CDS 56007 56579 . + 0 ID=cds-MCP9537336.1;Parent=gene-NND05_07145;Dbxref=NCBI_GP:MCP9537336.1;Name=MCP9537336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008025975.1;locus_tag=NND05_07145;product=chromate transporter;protein_id=MCP9537336.1;transl_table=11 JANDXE010000011.1 Genbank gene 56739 57386 . - . ID=gene-NND05_07150;Name=NND05_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07150 JANDXE010000011.1 Protein Homology CDS 56739 57386 . - 0 ID=cds-MCP9537337.1;Parent=gene-NND05_07150;Dbxref=NCBI_GP:MCP9537337.1;Name=MCP9537337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016665142.1;locus_tag=NND05_07150;product=DUF3256 family protein;protein_id=MCP9537337.1;transl_table=11 JANDXE010000011.1 Genbank gene 57994 60714 . - . ID=gene-NND05_07155;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=NND05_07155 JANDXE010000011.1 Protein Homology CDS 57994 60714 . - 0 ID=cds-MCP9537338.1;Parent=gene-NND05_07155;Dbxref=NCBI_GP:MCP9537338.1;Name=MCP9537338.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008781549.1;locus_tag=NND05_07155;product=pyruvate%2C phosphate dikinase;protein_id=MCP9537338.1;transl_table=11 JANDXE010000011.1 Genbank gene 61915 63552 . + . ID=gene-NND05_07160;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=NND05_07160 JANDXE010000011.1 Protein Homology CDS 61915 63552 . + 0 ID=cds-MCP9537339.1;Parent=gene-NND05_07160;Dbxref=NCBI_GP:MCP9537339.1;Name=MCP9537339.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909977.1;locus_tag=NND05_07160;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MCP9537339.1;transl_table=11 JANDXE010000011.1 Genbank gene 63576 64745 . + . ID=gene-NND05_07165;Name=NND05_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07165 JANDXE010000011.1 Protein Homology CDS 63576 64745 . + 0 ID=cds-MCP9537340.1;Parent=gene-NND05_07165;Dbxref=NCBI_GP:MCP9537340.1;Name=MCP9537340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410529.1;locus_tag=NND05_07165;product=OprO/OprP family phosphate-selective porin;protein_id=MCP9537340.1;transl_table=11 JANDXE010000011.1 Genbank gene 65018 66295 . - . ID=gene-NND05_07170;Name=NND05_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07170 JANDXE010000011.1 Protein Homology CDS 65018 66295 . - 0 ID=cds-MCP9537341.1;Parent=gene-NND05_07170;Dbxref=NCBI_GP:MCP9537341.1;Name=MCP9537341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847015.1;locus_tag=NND05_07170;product=DUF3078 domain-containing protein;protein_id=MCP9537341.1;transl_table=11 JANDXE010000011.1 Genbank gene 66433 68037 . + . ID=gene-NND05_07175;Name=NND05_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07175 JANDXE010000011.1 Protein Homology CDS 66433 68037 . + 0 ID=cds-MCP9537342.1;Parent=gene-NND05_07175;Dbxref=NCBI_GP:MCP9537342.1;Name=MCP9537342.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282535.1;locus_tag=NND05_07175;product=CTP synthase;protein_id=MCP9537342.1;transl_table=11 JANDXE010000011.1 Genbank gene 68114 70051 . + . ID=gene-NND05_07180;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=NND05_07180 JANDXE010000011.1 Protein Homology CDS 68114 70051 . + 0 ID=cds-MCP9537343.1;Parent=gene-NND05_07180;Dbxref=NCBI_GP:MCP9537343.1;Name=MCP9537343.1;Ontology_term=GO:0032977;gbkey=CDS;gene=yidC;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847017.1;locus_tag=NND05_07180;product=membrane protein insertase YidC;protein_id=MCP9537343.1;transl_table=11 JANDXE010000011.1 Genbank pseudogene 70286 70503 . + . ID=gene-NND05_07185;Name=NND05_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_07185;pseudo=true JANDXE010000011.1 Protein Homology CDS 70286 70503 . + 0 ID=cds-NND05_07185;Parent=gene-NND05_07185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004306855.1;locus_tag=NND05_07185;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JANDXE010000011.1 Genbank gene 70619 70975 . + . ID=gene-NND05_07190;Name=NND05_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07190 JANDXE010000011.1 Protein Homology CDS 70619 70975 . + 0 ID=cds-MCP9537344.1;Parent=gene-NND05_07190;Dbxref=NCBI_GP:MCP9537344.1;Name=MCP9537344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004297663.1;locus_tag=NND05_07190;product=HipA N-terminal domain-containing protein;protein_id=MCP9537344.1;transl_table=11 JANDXE010000011.1 Genbank gene 70991 71932 . + . ID=gene-NND05_07195;Name=NND05_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07195 JANDXE010000011.1 Protein Homology CDS 70991 71932 . + 0 ID=cds-MCP9537345.1;Parent=gene-NND05_07195;Dbxref=NCBI_GP:MCP9537345.1;Name=MCP9537345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007840698.1;locus_tag=NND05_07195;product=HipA domain-containing protein;protein_id=MCP9537345.1;transl_table=11 JANDXE010000011.1 Genbank gene 72014 72442 . + . ID=gene-NND05_07200;Name=NND05_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07200 JANDXE010000011.1 Protein Homology CDS 72014 72442 . + 0 ID=cds-MCP9537346.1;Parent=gene-NND05_07200;Dbxref=NCBI_GP:MCP9537346.1;Name=MCP9537346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253852.1;locus_tag=NND05_07200;product=rhodanese-like domain-containing protein;protein_id=MCP9537346.1;transl_table=11 JANDXE010000011.1 Genbank gene 72624 74087 . - . ID=gene-NND05_07205;Name=NND05_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07205 JANDXE010000011.1 Protein Homology CDS 72624 74087 . - 0 ID=cds-MCP9537347.1;Parent=gene-NND05_07205;Dbxref=NCBI_GP:MCP9537347.1;Name=MCP9537347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847020.1;locus_tag=NND05_07205;product=DUF1846 domain-containing protein;protein_id=MCP9537347.1;transl_table=11 JANDXE010000011.1 Genbank gene 74231 75364 . - . ID=gene-NND05_07210;Name=NND05_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07210 JANDXE010000011.1 Protein Homology CDS 74231 75364 . - 0 ID=cds-MCP9537348.1;Parent=gene-NND05_07210;Dbxref=NCBI_GP:MCP9537348.1;Name=MCP9537348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_07210;product=helix-turn-helix domain-containing protein;protein_id=MCP9537348.1;transl_table=11 JANDXE010000011.1 Genbank gene 75568 77733 . + . ID=gene-NND05_07215;Name=NND05_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07215 JANDXE010000011.1 Protein Homology CDS 75568 77733 . + 0 ID=cds-MCP9537349.1;Parent=gene-NND05_07215;Dbxref=NCBI_GP:MCP9537349.1;Name=MCP9537349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370696.1;locus_tag=NND05_07215;product=S9 family peptidase;protein_id=MCP9537349.1;transl_table=11 JANDXE010000011.1 Genbank gene 77798 79324 . - . ID=gene-NND05_07220;Name=NND05_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07220 JANDXE010000011.1 Protein Homology CDS 77798 79324 . - 0 ID=cds-MCP9537350.1;Parent=gene-NND05_07220;Dbxref=NCBI_GP:MCP9537350.1;Name=MCP9537350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150777.1;locus_tag=NND05_07220;product=peptide MFS transporter;protein_id=MCP9537350.1;transl_table=11 JANDXE010000011.1 Genbank gene 79625 80500 . + . ID=gene-NND05_07225;Name=NND05_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07225 JANDXE010000011.1 Protein Homology CDS 79625 80500 . + 0 ID=cds-MCP9537351.1;Parent=gene-NND05_07225;Dbxref=NCBI_GP:MCP9537351.1;Name=MCP9537351.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235426.1;locus_tag=NND05_07225;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537351.1;transl_table=11 JANDXE010000011.1 Genbank gene 80731 81405 . - . ID=gene-NND05_07230;Name=NND05_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07230 JANDXE010000011.1 Protein Homology CDS 80731 81405 . - 0 ID=cds-MCP9537352.1;Parent=gene-NND05_07230;Dbxref=NCBI_GP:MCP9537352.1;Name=MCP9537352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847026.1;locus_tag=NND05_07230;product=hypothetical protein;protein_id=MCP9537352.1;transl_table=11 JANDXE010000011.1 Genbank gene 81475 82854 . - . ID=gene-NND05_07235;Name=NND05_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07235 JANDXE010000011.1 Protein Homology CDS 81475 82854 . - 0 ID=cds-MCP9537353.1;Parent=gene-NND05_07235;Dbxref=NCBI_GP:MCP9537353.1;Name=MCP9537353.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847027.1;locus_tag=NND05_07235;product=MFS transporter;protein_id=MCP9537353.1;transl_table=11 JANDXE010000011.1 Genbank gene 82895 83665 . - . ID=gene-NND05_07240;Name=NND05_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07240 JANDXE010000011.1 Protein Homology CDS 82895 83665 . - 0 ID=cds-MCP9537354.1;Parent=gene-NND05_07240;Dbxref=NCBI_GP:MCP9537354.1;Name=MCP9537354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847028.1;locus_tag=NND05_07240;product=PorT family protein;protein_id=MCP9537354.1;transl_table=11 JANDXE010000011.1 Genbank gene 83714 85120 . - . ID=gene-NND05_07245;Name=NND05_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07245 JANDXE010000011.1 Protein Homology CDS 83714 85120 . - 0 ID=cds-MCP9537355.1;Parent=gene-NND05_07245;Dbxref=NCBI_GP:MCP9537355.1;Name=MCP9537355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370395.1;locus_tag=NND05_07245;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MCP9537355.1;transl_table=11 JANDXE010000011.1 Genbank pseudogene 85379 85675 . + . ID=gene-NND05_07250;Name=NND05_07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_07250;pseudo=true JANDXE010000011.1 Protein Homology CDS 85379 85675 . + 0 ID=cds-NND05_07250;Parent=gene-NND05_07250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411816.1;locus_tag=NND05_07250;product=gliding motility-associated C-terminal domain-containing protein;pseudo=true;transl_table=11 JANDXE010000011.1 Genbank gene 85694 88522 . + . ID=gene-NND05_07255;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NND05_07255 JANDXE010000011.1 Protein Homology CDS 85694 88522 . + 0 ID=cds-MCP9537356.1;Parent=gene-NND05_07255;Dbxref=NCBI_GP:MCP9537356.1;Name=MCP9537356.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463301.1;locus_tag=NND05_07255;product=excinuclease ABC subunit UvrA;protein_id=MCP9537356.1;transl_table=11 JANDXE010000011.1 Genbank gene 88612 90051 . - . ID=gene-NND05_07260;Name=NND05_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07260 JANDXE010000011.1 Protein Homology CDS 88612 90051 . - 0 ID=cds-MCP9537357.1;Parent=gene-NND05_07260;Dbxref=NCBI_GP:MCP9537357.1;Name=MCP9537357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846928.1;locus_tag=NND05_07260;product=amidophosphoribosyltransferase;protein_id=MCP9537357.1;transl_table=11 JANDXE010000011.1 Genbank gene 90224 92665 . - . ID=gene-NND05_07265;Name=NND05_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07265 JANDXE010000011.1 Protein Homology CDS 90224 92665 . - 0 ID=cds-MCP9537358.1;Parent=gene-NND05_07265;Dbxref=NCBI_GP:MCP9537358.1;Name=MCP9537358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369188.1;locus_tag=NND05_07265;product=DUF3943 domain-containing protein;protein_id=MCP9537358.1;transl_table=11 JANDXE010000011.1 Genbank gene 92833 94584 . - . ID=gene-NND05_07270;Name=NND05_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07270 JANDXE010000011.1 Protein Homology CDS 92833 94584 . - 0 ID=cds-MCP9537359.1;Parent=gene-NND05_07270;Dbxref=NCBI_GP:MCP9537359.1;Name=MCP9537359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846929.1;locus_tag=NND05_07270;product=phospho-sugar mutase;protein_id=MCP9537359.1;transl_table=11 JANDXE010000011.1 Genbank gene 94760 95080 . + . ID=gene-NND05_07275;Name=NND05_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07275 JANDXE010000011.1 Protein Homology CDS 94760 95080 . + 0 ID=cds-MCP9537360.1;Parent=gene-NND05_07275;Dbxref=NCBI_GP:MCP9537360.1;Name=MCP9537360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006947956.1;locus_tag=NND05_07275;product=DUF4491 family protein;protein_id=MCP9537360.1;transl_table=11 JANDXE010000011.1 Genbank gene 95096 95566 . + . ID=gene-NND05_07280;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NND05_07280 JANDXE010000011.1 Protein Homology CDS 95096 95566 . + 0 ID=cds-MCP9537361.1;Parent=gene-NND05_07280;Dbxref=NCBI_GP:MCP9537361.1;Name=MCP9537361.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133455.1;locus_tag=NND05_07280;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=MCP9537361.1;transl_table=11 JANDXE010000011.1 Genbank gene 95619 98474 . + . ID=gene-NND05_07285;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NND05_07285 JANDXE010000011.1 Protein Homology CDS 95619 98474 . + 0 ID=cds-MCP9537362.1;Parent=gene-NND05_07285;Dbxref=NCBI_GP:MCP9537362.1;Name=MCP9537362.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372662.1;locus_tag=NND05_07285;product=excinuclease ABC subunit UvrA;protein_id=MCP9537362.1;transl_table=11 JANDXE010000011.1 Genbank gene 98590 98973 . + . ID=gene-NND05_07290;Name=NND05_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07290 JANDXE010000011.1 Protein Homology CDS 98590 98973 . + 0 ID=cds-MCP9537363.1;Parent=gene-NND05_07290;Dbxref=NCBI_GP:MCP9537363.1;Name=MCP9537363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235886.1;locus_tag=NND05_07290;product=DUF1573 domain-containing protein;protein_id=MCP9537363.1;transl_table=11 JANDXE010000011.1 Genbank gene 98981 99844 . + . ID=gene-NND05_07295;Name=NND05_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07295 JANDXE010000011.1 Protein Homology CDS 98981 99844 . + 0 ID=cds-MCP9537364.1;Parent=gene-NND05_07295;Dbxref=NCBI_GP:MCP9537364.1;Name=MCP9537364.1;Note=N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846960.1;locus_tag=NND05_07295;product=EFR1 family ferrodoxin;protein_id=MCP9537364.1;transl_table=11 JANDXE010000011.1 Genbank gene 99914 101761 . + . ID=gene-NND05_07300;Name=NND05_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07300 JANDXE010000011.1 Protein Homology CDS 99914 101761 . + 0 ID=cds-MCP9537365.1;Parent=gene-NND05_07300;Dbxref=NCBI_GP:MCP9537365.1;Name=MCP9537365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03296.1;locus_tag=NND05_07300;product=M6 family metalloprotease domain-containing protein;protein_id=MCP9537365.1;transl_table=11 JANDXE010000011.1 Genbank gene 102233 102627 . + . ID=gene-NND05_07305;Name=NND05_07305;end_range=102627,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07305;partial=true JANDXE010000011.1 Protein Homology CDS 102233 102627 . + 0 ID=cds-MCP9537366.1;Parent=gene-NND05_07305;Dbxref=NCBI_GP:MCP9537366.1;Name=MCP9537366.1;end_range=102627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574869.1;locus_tag=NND05_07305;partial=true;product=hypothetical protein;protein_id=MCP9537366.1;transl_table=11 ##sequence-region JANDXE010000012.1 1 102505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000012.1 Genbank region 1 102505 . + . ID=JANDXE010000012.1:1..102505;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000012.1 Genbank gene 535 849 . + . ID=gene-NND05_07310;Name=NND05_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07310 JANDXE010000012.1 Protein Homology CDS 535 849 . + 0 ID=cds-MCP9537367.1;Parent=gene-NND05_07310;Dbxref=NCBI_GP:MCP9537367.1;Name=MCP9537367.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013617698.1;locus_tag=NND05_07310;product=HigA family addiction module antitoxin;protein_id=MCP9537367.1;transl_table=11 JANDXE010000012.1 Genbank gene 863 1081 . + . ID=gene-NND05_07315;Name=NND05_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07315 JANDXE010000012.1 Protein Homology CDS 863 1081 . + 0 ID=cds-MCP9537368.1;Parent=gene-NND05_07315;Dbxref=NCBI_GP:MCP9537368.1;Name=MCP9537368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024080.2;locus_tag=NND05_07315;product=DUF3791 domain-containing protein;protein_id=MCP9537368.1;transl_table=11 JANDXE010000012.1 Genbank gene 1078 1554 . + . ID=gene-NND05_07320;Name=NND05_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07320 JANDXE010000012.1 Protein Homology CDS 1078 1554 . + 0 ID=cds-MCP9537369.1;Parent=gene-NND05_07320;Dbxref=NCBI_GP:MCP9537369.1;Name=MCP9537369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801218.1;locus_tag=NND05_07320;product=DUF3990 domain-containing protein;protein_id=MCP9537369.1;transl_table=11 JANDXE010000012.1 Genbank gene 1551 1781 . + . ID=gene-NND05_07325;Name=NND05_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07325 JANDXE010000012.1 Protein Homology CDS 1551 1781 . + 0 ID=cds-MCP9537370.1;Parent=gene-NND05_07325;Dbxref=NCBI_GP:MCP9537370.1;Name=MCP9537370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018452377.1;locus_tag=NND05_07325;product=DUF3791 domain-containing protein;protein_id=MCP9537370.1;transl_table=11 JANDXE010000012.1 Genbank gene 1808 2959 . + . ID=gene-NND05_07330;Name=NND05_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07330 JANDXE010000012.1 Protein Homology CDS 1808 2959 . + 0 ID=cds-MCP9537371.1;Parent=gene-NND05_07330;Dbxref=NCBI_GP:MCP9537371.1;Name=MCP9537371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020965.2;locus_tag=NND05_07330;product=acyloxyacyl hydrolase;protein_id=MCP9537371.1;transl_table=11 JANDXE010000012.1 Genbank gene 3146 4666 . - . ID=gene-NND05_07335;Name=NND05_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07335 JANDXE010000012.1 Protein Homology CDS 3146 4666 . - 0 ID=cds-MCP9537372.1;Parent=gene-NND05_07335;Dbxref=NCBI_GP:MCP9537372.1;Name=MCP9537372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911437.1;locus_tag=NND05_07335;product=alpha/beta hydrolase;protein_id=MCP9537372.1;transl_table=11 JANDXE010000012.1 Genbank gene 4811 5305 . - . ID=gene-NND05_07340;Name=NND05_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07340 JANDXE010000012.1 Protein Homology CDS 4811 5305 . - 0 ID=cds-MCP9537373.1;Parent=gene-NND05_07340;Dbxref=NCBI_GP:MCP9537373.1;Name=MCP9537373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856762.1;locus_tag=NND05_07340;product=GAF domain-containing protein;protein_id=MCP9537373.1;transl_table=11 JANDXE010000012.1 Genbank gene 5487 6035 . + . ID=gene-NND05_07345;Name=NND05_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07345 JANDXE010000012.1 Protein Homology CDS 5487 6035 . + 0 ID=cds-MCP9537374.1;Parent=gene-NND05_07345;Dbxref=NCBI_GP:MCP9537374.1;Name=MCP9537374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010993701.1;locus_tag=NND05_07345;product=NUDIX hydrolase;protein_id=MCP9537374.1;transl_table=11 JANDXE010000012.1 Genbank gene 6121 6453 . + . ID=gene-NND05_07350;Name=NND05_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07350 JANDXE010000012.1 Protein Homology CDS 6121 6453 . + 0 ID=cds-MCP9537375.1;Parent=gene-NND05_07350;Dbxref=NCBI_GP:MCP9537375.1;Name=MCP9537375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411667.1;locus_tag=NND05_07350;product=cupin domain-containing protein;protein_id=MCP9537375.1;transl_table=11 JANDXE010000012.1 Genbank gene 6637 7026 . - . ID=gene-NND05_07355;Name=NND05_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07355 JANDXE010000012.1 Protein Homology CDS 6637 7026 . - 0 ID=cds-MCP9537376.1;Parent=gene-NND05_07355;Dbxref=NCBI_GP:MCP9537376.1;Name=MCP9537376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173389.1;locus_tag=NND05_07355;product=VOC family protein;protein_id=MCP9537376.1;transl_table=11 JANDXE010000012.1 Genbank gene 7084 7818 . - . ID=gene-NND05_07360;Name=NND05_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07360 JANDXE010000012.1 Protein Homology CDS 7084 7818 . - 0 ID=cds-MCP9537377.1;Parent=gene-NND05_07360;Dbxref=NCBI_GP:MCP9537377.1;Name=MCP9537377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005938521.1;locus_tag=NND05_07360;product=hypothetical protein;protein_id=MCP9537377.1;transl_table=11 JANDXE010000012.1 Genbank gene 7974 8858 . - . ID=gene-NND05_07365;Name=NND05_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07365 JANDXE010000012.1 Protein Homology CDS 7974 8858 . - 0 ID=cds-MCP9537378.1;Parent=gene-NND05_07365;Dbxref=NCBI_GP:MCP9537378.1;Name=MCP9537378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018710727.1;locus_tag=NND05_07365;product=carbohydrate kinase;protein_id=MCP9537378.1;transl_table=11 JANDXE010000012.1 Genbank gene 9171 10532 . - . ID=gene-NND05_07370;Name=NND05_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07370 JANDXE010000012.1 Protein Homology CDS 9171 10532 . - 0 ID=cds-MCP9537379.1;Parent=gene-NND05_07370;Dbxref=NCBI_GP:MCP9537379.1;Name=MCP9537379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847453.1;locus_tag=NND05_07370;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCP9537379.1;transl_table=11 JANDXE010000012.1 Genbank gene 10677 11135 . - . ID=gene-NND05_07375;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=NND05_07375 JANDXE010000012.1 Protein Homology CDS 10677 11135 . - 0 ID=cds-MCP9537380.1;Parent=gene-NND05_07375;Dbxref=NCBI_GP:MCP9537380.1;Name=MCP9537380.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847454.1;locus_tag=NND05_07375;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=MCP9537380.1;transl_table=11 JANDXE010000012.1 Genbank gene 11184 12572 . - . ID=gene-NND05_07380;Name=NND05_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07380 JANDXE010000012.1 Protein Homology CDS 11184 12572 . - 0 ID=cds-MCP9537381.1;Parent=gene-NND05_07380;Dbxref=NCBI_GP:MCP9537381.1;Name=MCP9537381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847455.1;locus_tag=NND05_07380;product=Y-family DNA polymerase;protein_id=MCP9537381.1;transl_table=11 JANDXE010000012.1 cmsearch riboswitch 12698 12949 . + . ID=id-JANDXE010000012.1:12698..12949;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JANDXE010000012.1 Genbank gene 12907 15186 . + . ID=gene-NND05_07385;Name=NND05_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07385 JANDXE010000012.1 Protein Homology CDS 12907 15186 . + 0 ID=cds-MCP9537382.1;Parent=gene-NND05_07385;Dbxref=NCBI_GP:MCP9537382.1;Name=MCP9537382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_07385;product=TonB-dependent receptor;protein_id=MCP9537382.1;transl_table=11 JANDXE010000012.1 Genbank gene 15273 16382 . + . ID=gene-NND05_07390;Name=NND05_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07390 JANDXE010000012.1 GeneMarkS-2+ CDS 15273 16382 . + 0 ID=cds-MCP9537383.1;Parent=gene-NND05_07390;Dbxref=NCBI_GP:MCP9537383.1;Name=MCP9537383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07390;product=hypothetical protein;protein_id=MCP9537383.1;transl_table=11 JANDXE010000012.1 Genbank gene 16530 17042 . + . ID=gene-NND05_07395;Name=NND05_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07395 JANDXE010000012.1 Protein Homology CDS 16530 17042 . + 0 ID=cds-MCP9537384.1;Parent=gene-NND05_07395;Dbxref=NCBI_GP:MCP9537384.1;Name=MCP9537384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370900.1;locus_tag=NND05_07395;product=nitroreductase family protein;protein_id=MCP9537384.1;transl_table=11 JANDXE010000012.1 Genbank gene 17055 19256 . + . ID=gene-NND05_07400;Name=NND05_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07400 JANDXE010000012.1 Protein Homology CDS 17055 19256 . + 0 ID=cds-MCP9537385.1;Parent=gene-NND05_07400;Dbxref=NCBI_GP:MCP9537385.1;Name=MCP9537385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847457.1;locus_tag=NND05_07400;product=helix-turn-helix domain-containing protein;protein_id=MCP9537385.1;transl_table=11 JANDXE010000012.1 Genbank gene 19434 20606 . - . ID=gene-NND05_07405;Name=NND05_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07405 JANDXE010000012.1 Protein Homology CDS 19434 20606 . - 0 ID=cds-MCP9537386.1;Parent=gene-NND05_07405;Dbxref=NCBI_GP:MCP9537386.1;Name=MCP9537386.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264078.1;locus_tag=NND05_07405;product=PatB family C-S lyase;protein_id=MCP9537386.1;transl_table=11 JANDXE010000012.1 Genbank gene 20761 21945 . - . ID=gene-NND05_07410;Name=NND05_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07410 JANDXE010000012.1 Protein Homology CDS 20761 21945 . - 0 ID=cds-MCP9537387.1;Parent=gene-NND05_07410;Dbxref=NCBI_GP:MCP9537387.1;Name=MCP9537387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011575.1;locus_tag=NND05_07410;product=PLP-dependent aspartate aminotransferase family protein;protein_id=MCP9537387.1;transl_table=11 JANDXE010000012.1 Genbank gene 22116 24356 . - . ID=gene-NND05_07415;Name=NND05_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07415 JANDXE010000012.1 Protein Homology CDS 22116 24356 . - 0 ID=cds-MCP9537388.1;Parent=gene-NND05_07415;Dbxref=NCBI_GP:MCP9537388.1;Name=MCP9537388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670742.1;locus_tag=NND05_07415;product=TonB-dependent receptor;protein_id=MCP9537388.1;transl_table=11 JANDXE010000012.1 Genbank gene 24668 27265 . + . ID=gene-NND05_07420;Name=NND05_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07420 JANDXE010000012.1 Protein Homology CDS 24668 27265 . + 0 ID=cds-MCP9537389.1;Parent=gene-NND05_07420;Dbxref=NCBI_GP:MCP9537389.1;Name=MCP9537389.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847459.1;locus_tag=NND05_07420;product=prolyl oligopeptidase family serine peptidase;protein_id=MCP9537389.1;transl_table=11 JANDXE010000012.1 Genbank gene 27529 28701 . - . ID=gene-NND05_07425;Name=NND05_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07425 JANDXE010000012.1 Protein Homology CDS 27529 28701 . - 0 ID=cds-MCP9537390.1;Parent=gene-NND05_07425;Dbxref=NCBI_GP:MCP9537390.1;Name=MCP9537390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847460.1;locus_tag=NND05_07425;product=MFS transporter;protein_id=MCP9537390.1;transl_table=11 JANDXE010000012.1 Genbank gene 29102 29275 . + . ID=gene-NND05_07430;Name=NND05_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07430 JANDXE010000012.1 Protein Homology CDS 29102 29275 . + 0 ID=cds-MCP9537391.1;Parent=gene-NND05_07430;Dbxref=NCBI_GP:MCP9537391.1;Name=MCP9537391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345885.1;locus_tag=NND05_07430;product=hypothetical protein;protein_id=MCP9537391.1;transl_table=11 JANDXE010000012.1 Genbank gene 29665 31050 . + . ID=gene-NND05_07435;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=NND05_07435 JANDXE010000012.1 Protein Homology CDS 29665 31050 . + 0 ID=cds-MCP9537392.1;Parent=gene-NND05_07435;Dbxref=NCBI_GP:MCP9537392.1;Name=MCP9537392.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920140.1;locus_tag=NND05_07435;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=MCP9537392.1;transl_table=11 JANDXE010000012.1 Genbank gene 31104 31988 . + . ID=gene-NND05_07440;Name=NND05_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07440 JANDXE010000012.1 Protein Homology CDS 31104 31988 . + 0 ID=cds-MCP9537393.1;Parent=gene-NND05_07440;Dbxref=NCBI_GP:MCP9537393.1;Name=MCP9537393.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847464.1;locus_tag=NND05_07440;product=TIGR01212 family radical SAM protein;protein_id=MCP9537393.1;transl_table=11 JANDXE010000012.1 Genbank gene 31992 33017 . + . ID=gene-NND05_07445;Name=NND05_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07445 JANDXE010000012.1 Protein Homology CDS 31992 33017 . + 0 ID=cds-MCP9537394.1;Parent=gene-NND05_07445;Dbxref=NCBI_GP:MCP9537394.1;Name=MCP9537394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063275.1;locus_tag=NND05_07445;product=glycosyltransferase family 2 protein;protein_id=MCP9537394.1;transl_table=11 JANDXE010000012.1 Genbank gene 33202 34020 . + . ID=gene-NND05_07450;Name=NND05_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07450 JANDXE010000012.1 Protein Homology CDS 33202 34020 . + 0 ID=cds-MCP9537395.1;Parent=gene-NND05_07450;Dbxref=NCBI_GP:MCP9537395.1;Name=MCP9537395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847467.1;locus_tag=NND05_07450;product=gliding motility protein GldB;protein_id=MCP9537395.1;transl_table=11 JANDXE010000012.1 Genbank gene 34135 36291 . + . ID=gene-NND05_07455;Name=NND05_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07455 JANDXE010000012.1 Protein Homology CDS 34135 36291 . + 0 ID=cds-MCP9537396.1;Parent=gene-NND05_07455;Dbxref=NCBI_GP:MCP9537396.1;Name=MCP9537396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348605.1;locus_tag=NND05_07455;product=S9 family peptidase;protein_id=MCP9537396.1;transl_table=11 JANDXE010000012.1 Genbank gene 36486 37115 . - . ID=gene-NND05_07460;Name=NND05_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07460 JANDXE010000012.1 GeneMarkS-2+ CDS 36486 37115 . - 0 ID=cds-MCP9537397.1;Parent=gene-NND05_07460;Dbxref=NCBI_GP:MCP9537397.1;Name=MCP9537397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07460;product=hypothetical protein;protein_id=MCP9537397.1;transl_table=11 JANDXE010000012.1 Genbank gene 37145 38008 . - . ID=gene-NND05_07465;Name=NND05_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07465 JANDXE010000012.1 Protein Homology CDS 37145 38008 . - 0 ID=cds-MCP9537398.1;Parent=gene-NND05_07465;Dbxref=NCBI_GP:MCP9537398.1;Name=MCP9537398.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462228.1;locus_tag=NND05_07465;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537398.1;transl_table=11 JANDXE010000012.1 Genbank gene 38189 39655 . - . ID=gene-NND05_07470;Name=NND05_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07470 JANDXE010000012.1 Protein Homology CDS 38189 39655 . - 0 ID=cds-MCP9537399.1;Parent=gene-NND05_07470;Dbxref=NCBI_GP:MCP9537399.1;Name=MCP9537399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282382.1;locus_tag=NND05_07470;product=trypsin-like peptidase domain-containing protein;protein_id=MCP9537399.1;transl_table=11 JANDXE010000012.1 Genbank gene 40112 40543 . + . ID=gene-NND05_07475;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NND05_07475 JANDXE010000012.1 cmsearch RNase_P_RNA 40112 40543 . + . ID=rna-NND05_07475;Parent=gene-NND05_07475;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_07475;product=RNase P RNA component class A JANDXE010000012.1 cmsearch exon 40112 40543 . + . ID=exon-NND05_07475-1;Parent=rna-NND05_07475;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_07475;product=RNase P RNA component class A JANDXE010000012.1 Genbank gene 40657 41091 . + . ID=gene-NND05_07480;Name=NND05_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07480 JANDXE010000012.1 Protein Homology CDS 40657 41091 . + 0 ID=cds-MCP9537400.1;Parent=gene-NND05_07480;Dbxref=NCBI_GP:MCP9537400.1;Name=MCP9537400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342239.1;locus_tag=NND05_07480;product=hypothetical protein;protein_id=MCP9537400.1;transl_table=11 JANDXE010000012.1 Genbank gene 41113 41520 . + . ID=gene-NND05_07485;Name=NND05_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07485 JANDXE010000012.1 Protein Homology CDS 41113 41520 . + 0 ID=cds-MCP9537401.1;Parent=gene-NND05_07485;Dbxref=NCBI_GP:MCP9537401.1;Name=MCP9537401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006951671.1;locus_tag=NND05_07485;product=YkvA family protein;protein_id=MCP9537401.1;transl_table=11 JANDXE010000012.1 Genbank gene 41652 42986 . - . ID=gene-NND05_07490;Name=NND05_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07490 JANDXE010000012.1 Protein Homology CDS 41652 42986 . - 0 ID=cds-MCP9537402.1;Parent=gene-NND05_07490;Dbxref=NCBI_GP:MCP9537402.1;Name=MCP9537402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822310.1;locus_tag=NND05_07490;product=NADP-specific glutamate dehydrogenase;protein_id=MCP9537402.1;transl_table=11 JANDXE010000012.1 Genbank gene 43339 43431 . - . ID=gene-NND05_07495;Name=NND05_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07495 JANDXE010000012.1 Protein Homology CDS 43339 43431 . - 0 ID=cds-MCP9537403.1;Parent=gene-NND05_07495;Dbxref=NCBI_GP:MCP9537403.1;Name=MCP9537403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005681203.1;locus_tag=NND05_07495;product=smalltalk protein;protein_id=MCP9537403.1;transl_table=11 JANDXE010000012.1 Genbank gene 43556 44293 . - . ID=gene-NND05_07500;Name=NND05_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07500 JANDXE010000012.1 Protein Homology CDS 43556 44293 . - 0 ID=cds-MCP9537404.1;Parent=gene-NND05_07500;Dbxref=NCBI_GP:MCP9537404.1;Name=MCP9537404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847114.1;locus_tag=NND05_07500;product=DNA-binding protein;protein_id=MCP9537404.1;transl_table=11 JANDXE010000012.1 Genbank gene 44392 44592 . - . ID=gene-NND05_07505;Name=NND05_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07505 JANDXE010000012.1 GeneMarkS-2+ CDS 44392 44592 . - 0 ID=cds-MCP9537405.1;Parent=gene-NND05_07505;Dbxref=NCBI_GP:MCP9537405.1;Name=MCP9537405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07505;product=hypothetical protein;protein_id=MCP9537405.1;transl_table=11 JANDXE010000012.1 Genbank gene 45437 46804 . + . ID=gene-NND05_07510;Name=NND05_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07510 JANDXE010000012.1 GeneMarkS-2+ CDS 45437 46804 . + 0 ID=cds-MCP9537406.1;Parent=gene-NND05_07510;Dbxref=NCBI_GP:MCP9537406.1;Name=MCP9537406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07510;product=hypothetical protein;protein_id=MCP9537406.1;transl_table=11 JANDXE010000012.1 Genbank gene 46975 47457 . - . ID=gene-NND05_07515;Name=NND05_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07515 JANDXE010000012.1 GeneMarkS-2+ CDS 46975 47457 . - 0 ID=cds-MCP9537407.1;Parent=gene-NND05_07515;Dbxref=NCBI_GP:MCP9537407.1;Name=MCP9537407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07515;product=hypothetical protein;protein_id=MCP9537407.1;transl_table=11 JANDXE010000012.1 Genbank gene 47609 48349 . - . ID=gene-NND05_07520;Name=NND05_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07520 JANDXE010000012.1 GeneMarkS-2+ CDS 47609 48349 . - 0 ID=cds-MCP9537408.1;Parent=gene-NND05_07520;Dbxref=NCBI_GP:MCP9537408.1;Name=MCP9537408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07520;product=hypothetical protein;protein_id=MCP9537408.1;transl_table=11 JANDXE010000012.1 Genbank gene 48425 48841 . + . ID=gene-NND05_07525;Name=NND05_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07525 JANDXE010000012.1 Protein Homology CDS 48425 48841 . + 0 ID=cds-MCP9537409.1;Parent=gene-NND05_07525;Dbxref=NCBI_GP:MCP9537409.1;Name=MCP9537409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272127.1;locus_tag=NND05_07525;product=helix-turn-helix domain-containing protein;protein_id=MCP9537409.1;transl_table=11 JANDXE010000012.1 Genbank gene 49060 49437 . + . ID=gene-NND05_07530;Name=NND05_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07530 JANDXE010000012.1 Protein Homology CDS 49060 49437 . + 0 ID=cds-MCP9537410.1;Parent=gene-NND05_07530;Dbxref=NCBI_GP:MCP9537410.1;Name=MCP9537410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=NND05_07530;product=transposase;protein_id=MCP9537410.1;transl_table=11 JANDXE010000012.1 Genbank gene 49563 49820 . + . ID=gene-NND05_07535;Name=NND05_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07535 JANDXE010000012.1 Protein Homology CDS 49563 49820 . + 0 ID=cds-MCP9537411.1;Parent=gene-NND05_07535;Dbxref=NCBI_GP:MCP9537411.1;Name=MCP9537411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628616.1;locus_tag=NND05_07535;product=hypothetical protein;protein_id=MCP9537411.1;transl_table=11 JANDXE010000012.1 Genbank gene 50000 50365 . - . ID=gene-NND05_07540;Name=NND05_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07540 JANDXE010000012.1 GeneMarkS-2+ CDS 50000 50365 . - 0 ID=cds-MCP9537412.1;Parent=gene-NND05_07540;Dbxref=NCBI_GP:MCP9537412.1;Name=MCP9537412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07540;product=hypothetical protein;protein_id=MCP9537412.1;transl_table=11 JANDXE010000012.1 Genbank gene 50370 50912 . - . ID=gene-NND05_07545;Name=NND05_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07545 JANDXE010000012.1 GeneMarkS-2+ CDS 50370 50912 . - 0 ID=cds-MCP9537413.1;Parent=gene-NND05_07545;Dbxref=NCBI_GP:MCP9537413.1;Name=MCP9537413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07545;product=hypothetical protein;protein_id=MCP9537413.1;transl_table=11 JANDXE010000012.1 Genbank gene 51029 51415 . + . ID=gene-NND05_07550;Name=NND05_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07550 JANDXE010000012.1 Protein Homology CDS 51029 51415 . + 0 ID=cds-MCP9537414.1;Parent=gene-NND05_07550;Dbxref=NCBI_GP:MCP9537414.1;Name=MCP9537414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272127.1;locus_tag=NND05_07550;product=helix-turn-helix domain-containing protein;protein_id=MCP9537414.1;transl_table=11 JANDXE010000012.1 Genbank gene 51663 52037 . + . ID=gene-NND05_07555;Name=NND05_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07555 JANDXE010000012.1 Protein Homology CDS 51663 52037 . + 0 ID=cds-MCP9537415.1;Parent=gene-NND05_07555;Dbxref=NCBI_GP:MCP9537415.1;Name=MCP9537415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=NND05_07555;product=transposase;protein_id=MCP9537415.1;transl_table=11 JANDXE010000012.1 Genbank gene 52557 53423 . - . ID=gene-NND05_07560;Name=NND05_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07560 JANDXE010000012.1 Protein Homology CDS 52557 53423 . - 0 ID=cds-MCP9537416.1;Parent=gene-NND05_07560;Dbxref=NCBI_GP:MCP9537416.1;Name=MCP9537416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846246.1;locus_tag=NND05_07560;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9537416.1;transl_table=11 JANDXE010000012.1 Genbank gene 53813 54094 . + . ID=gene-NND05_07565;Name=NND05_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07565 JANDXE010000012.1 Protein Homology CDS 53813 54094 . + 0 ID=cds-MCP9537417.1;Parent=gene-NND05_07565;Dbxref=NCBI_GP:MCP9537417.1;Name=MCP9537417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064622.1;locus_tag=NND05_07565;product=DUF3127 domain-containing protein;protein_id=MCP9537417.1;transl_table=11 JANDXE010000012.1 Genbank gene 54210 54626 . + . ID=gene-NND05_07570;Name=NND05_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07570 JANDXE010000012.1 Protein Homology CDS 54210 54626 . + 0 ID=cds-MCP9537418.1;Parent=gene-NND05_07570;Dbxref=NCBI_GP:MCP9537418.1;Name=MCP9537418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847103.1;locus_tag=NND05_07570;product=hypothetical protein;protein_id=MCP9537418.1;transl_table=11 JANDXE010000012.1 Genbank gene 54672 55085 . + . ID=gene-NND05_07575;Name=NND05_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07575 JANDXE010000012.1 GeneMarkS-2+ CDS 54672 55085 . + 0 ID=cds-MCP9537419.1;Parent=gene-NND05_07575;Dbxref=NCBI_GP:MCP9537419.1;Name=MCP9537419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07575;product=hypothetical protein;protein_id=MCP9537419.1;transl_table=11 JANDXE010000012.1 Genbank gene 55086 57236 . + . ID=gene-NND05_07580;Name=NND05_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07580 JANDXE010000012.1 Protein Homology CDS 55086 57236 . + 0 ID=cds-MCP9537420.1;Parent=gene-NND05_07580;Dbxref=NCBI_GP:MCP9537420.1;Name=MCP9537420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063904.1;locus_tag=NND05_07580;product=YfjI family protein;protein_id=MCP9537420.1;transl_table=11 JANDXE010000012.1 Genbank gene 57365 57940 . + . ID=gene-NND05_07585;Name=NND05_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07585 JANDXE010000012.1 GeneMarkS-2+ CDS 57365 57940 . + 0 ID=cds-MCP9537421.1;Parent=gene-NND05_07585;Dbxref=NCBI_GP:MCP9537421.1;Name=MCP9537421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07585;product=hypothetical protein;protein_id=MCP9537421.1;transl_table=11 JANDXE010000012.1 Genbank gene 57969 58373 . + . ID=gene-NND05_07590;Name=NND05_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07590 JANDXE010000012.1 Protein Homology CDS 57969 58373 . + 0 ID=cds-MCP9537422.1;Parent=gene-NND05_07590;Dbxref=NCBI_GP:MCP9537422.1;Name=MCP9537422.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007572663.1;locus_tag=NND05_07590;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9537422.1;transl_table=11 JANDXE010000012.1 Genbank gene 58700 60262 . + . ID=gene-NND05_07595;Name=NND05_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07595 JANDXE010000012.1 Protein Homology CDS 58700 60262 . + 0 ID=cds-MCP9537423.1;Parent=gene-NND05_07595;Dbxref=NCBI_GP:MCP9537423.1;Name=MCP9537423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008621491.1;locus_tag=NND05_07595;product=ATP-binding protein;protein_id=MCP9537423.1;transl_table=11 JANDXE010000012.1 Genbank gene 60374 61588 . - . ID=gene-NND05_07600;Name=NND05_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07600 JANDXE010000012.1 Protein Homology CDS 60374 61588 . - 0 ID=cds-MCP9537424.1;Parent=gene-NND05_07600;Dbxref=NCBI_GP:MCP9537424.1;Name=MCP9537424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848293.1;locus_tag=NND05_07600;product=dicarboxylate/amino acid:cation symporter;protein_id=MCP9537424.1;transl_table=11 JANDXE010000012.1 Genbank gene 61959 62621 . - . ID=gene-NND05_07605;Name=NND05_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07605 JANDXE010000012.1 Protein Homology CDS 61959 62621 . - 0 ID=cds-MCP9537425.1;Parent=gene-NND05_07605;Dbxref=NCBI_GP:MCP9537425.1;Name=MCP9537425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025693.2;locus_tag=NND05_07605;product=DUF4391 domain-containing protein;protein_id=MCP9537425.1;transl_table=11 JANDXE010000012.1 Genbank gene 62677 65916 . - . ID=gene-NND05_07610;Name=NND05_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07610 JANDXE010000012.1 Protein Homology CDS 62677 65916 . - 0 ID=cds-MCP9537426.1;Parent=gene-NND05_07610;Dbxref=NCBI_GP:MCP9537426.1;Name=MCP9537426.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847433.1;locus_tag=NND05_07610;product=SNF2-related protein;protein_id=MCP9537426.1;transl_table=11 JANDXE010000012.1 Genbank gene 65927 69061 . - . ID=gene-NND05_07615;Name=NND05_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07615 JANDXE010000012.1 Protein Homology CDS 65927 69061 . - 0 ID=cds-MCP9537427.1;Parent=gene-NND05_07615;Dbxref=NCBI_GP:MCP9537427.1;Name=MCP9537427.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847434.1;locus_tag=NND05_07615;product=DEAD/DEAH box helicase family protein;protein_id=MCP9537427.1;transl_table=11 JANDXE010000012.1 Genbank gene 69058 70983 . - . ID=gene-NND05_07620;Name=NND05_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07620 JANDXE010000012.1 Protein Homology CDS 69058 70983 . - 0 ID=cds-MCP9537428.1;Parent=gene-NND05_07620;Dbxref=NCBI_GP:MCP9537428.1;Name=MCP9537428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NND05_07620;product=site-specific DNA-methyltransferase;protein_id=MCP9537428.1;transl_table=11 JANDXE010000012.1 Genbank gene 71437 71637 . - . ID=gene-NND05_07625;Name=NND05_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07625 JANDXE010000012.1 GeneMarkS-2+ CDS 71437 71637 . - 0 ID=cds-MCP9537429.1;Parent=gene-NND05_07625;Dbxref=NCBI_GP:MCP9537429.1;Name=MCP9537429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07625;product=hypothetical protein;protein_id=MCP9537429.1;transl_table=11 JANDXE010000012.1 Genbank gene 71821 72201 . + . ID=gene-NND05_07630;Name=NND05_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07630 JANDXE010000012.1 Protein Homology CDS 71821 72201 . + 0 ID=cds-MCP9537430.1;Parent=gene-NND05_07630;Dbxref=NCBI_GP:MCP9537430.1;Name=MCP9537430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611480.1;locus_tag=NND05_07630;product=hypothetical protein;protein_id=MCP9537430.1;transl_table=11 JANDXE010000012.1 Genbank gene 72198 72629 . + . ID=gene-NND05_07635;Name=NND05_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07635 JANDXE010000012.1 Protein Homology CDS 72198 72629 . + 0 ID=cds-MCP9537431.1;Parent=gene-NND05_07635;Dbxref=NCBI_GP:MCP9537431.1;Name=MCP9537431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007217931.1;locus_tag=NND05_07635;product=hypothetical protein;protein_id=MCP9537431.1;transl_table=11 JANDXE010000012.1 Genbank gene 72880 73608 . - . ID=gene-NND05_07640;Name=NND05_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07640 JANDXE010000012.1 Protein Homology CDS 72880 73608 . - 0 ID=cds-MCP9537432.1;Parent=gene-NND05_07640;Dbxref=NCBI_GP:MCP9537432.1;Name=MCP9537432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014035.2;locus_tag=NND05_07640;product=sulfite exporter TauE/SafE family protein;protein_id=MCP9537432.1;transl_table=11 JANDXE010000012.1 Genbank gene 73621 74082 . - . ID=gene-NND05_07645;Name=NND05_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07645 JANDXE010000012.1 Protein Homology CDS 73621 74082 . - 0 ID=cds-MCP9537433.1;Parent=gene-NND05_07645;Dbxref=NCBI_GP:MCP9537433.1;Name=MCP9537433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006256545.1;locus_tag=NND05_07645;product=peroxiredoxin;protein_id=MCP9537433.1;transl_table=11 JANDXE010000012.1 Genbank gene 74123 76729 . - . ID=gene-NND05_07650;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=NND05_07650 JANDXE010000012.1 Protein Homology CDS 74123 76729 . - 0 ID=cds-MCP9537434.1;Parent=gene-NND05_07650;Dbxref=NCBI_GP:MCP9537434.1;Name=MCP9537434.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846454.1;locus_tag=NND05_07650;product=ATP-dependent helicase HrpB;protein_id=MCP9537434.1;transl_table=11 JANDXE010000012.1 Genbank gene 76769 78097 . - . ID=gene-NND05_07655;Name=NND05_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07655 JANDXE010000012.1 Protein Homology CDS 76769 78097 . - 0 ID=cds-MCP9537435.1;Parent=gene-NND05_07655;Dbxref=NCBI_GP:MCP9537435.1;Name=MCP9537435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=NND05_07655;product=ComEC/Rec2 family competence protein;protein_id=MCP9537435.1;transl_table=11 JANDXE010000012.1 Genbank gene 78285 80084 . - . ID=gene-NND05_07660;Name=NND05_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07660 JANDXE010000012.1 Protein Homology CDS 78285 80084 . - 0 ID=cds-MCP9537436.1;Parent=gene-NND05_07660;Dbxref=NCBI_GP:MCP9537436.1;Name=MCP9537436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849111.1;locus_tag=NND05_07660;product=DEAD/DEAH box helicase;protein_id=MCP9537436.1;transl_table=11 JANDXE010000012.1 Genbank gene 80168 81430 . - . ID=gene-NND05_07665;Name=NND05_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07665 JANDXE010000012.1 Protein Homology CDS 80168 81430 . - 0 ID=cds-MCP9537437.1;Parent=gene-NND05_07665;Dbxref=NCBI_GP:MCP9537437.1;Name=MCP9537437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849112.1;locus_tag=NND05_07665;product=LptF/LptG family permease;protein_id=MCP9537437.1;transl_table=11 JANDXE010000012.1 Genbank gene 81489 82616 . - . ID=gene-NND05_07670;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=NND05_07670 JANDXE010000012.1 Protein Homology CDS 81489 82616 . - 0 ID=cds-MCP9537438.1;Parent=gene-NND05_07670;Dbxref=NCBI_GP:MCP9537438.1;Name=MCP9537438.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264992.1;locus_tag=NND05_07670;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=MCP9537438.1;transl_table=11 JANDXE010000012.1 Genbank gene 82613 85090 . - . ID=gene-NND05_07675;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=NND05_07675 JANDXE010000012.1 Protein Homology CDS 82613 85090 . - 0 ID=cds-MCP9537439.1;Parent=gene-NND05_07675;Dbxref=NCBI_GP:MCP9537439.1;Name=MCP9537439.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376641.1;locus_tag=NND05_07675;product=endopeptidase La;protein_id=MCP9537439.1;transl_table=11 JANDXE010000012.1 Genbank gene 85329 86024 . + . ID=gene-NND05_07680;Name=NND05_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07680 JANDXE010000012.1 Protein Homology CDS 85329 86024 . + 0 ID=cds-MCP9537440.1;Parent=gene-NND05_07680;Dbxref=NCBI_GP:MCP9537440.1;Name=MCP9537440.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849116.1;locus_tag=NND05_07680;product=methyltransferase;protein_id=MCP9537440.1;transl_table=11 JANDXE010000012.1 Genbank gene 86028 87068 . - . ID=gene-NND05_07685;Name=NND05_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07685 JANDXE010000012.1 Protein Homology CDS 86028 87068 . - 0 ID=cds-MCP9537441.1;Parent=gene-NND05_07685;Dbxref=NCBI_GP:MCP9537441.1;Name=MCP9537441.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370614.1;locus_tag=NND05_07685;product=YegS/Rv2252/BmrU family lipid kinase;protein_id=MCP9537441.1;transl_table=11 JANDXE010000012.1 Genbank gene 87260 88453 . + . ID=gene-NND05_07690;Name=NND05_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07690 JANDXE010000012.1 Protein Homology CDS 87260 88453 . + 0 ID=cds-MCP9537442.1;Parent=gene-NND05_07690;Dbxref=NCBI_GP:MCP9537442.1;Name=MCP9537442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966385.1;locus_tag=NND05_07690;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MCP9537442.1;transl_table=11 JANDXE010000012.1 Genbank gene 88686 88759 . + . ID=gene-NND05_07695;Name=NND05_07695;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_07695 JANDXE010000012.1 tRNAscan-SE tRNA 88686 88759 . + . ID=rna-NND05_07695;Parent=gene-NND05_07695;anticodon=(pos:88720..88722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07695;product=tRNA-Pro JANDXE010000012.1 tRNAscan-SE exon 88686 88759 . + . ID=exon-NND05_07695-1;Parent=rna-NND05_07695;anticodon=(pos:88720..88722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07695;product=tRNA-Pro JANDXE010000012.1 Genbank gene 88796 88869 . + . ID=gene-NND05_07700;Name=NND05_07700;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_07700 JANDXE010000012.1 tRNAscan-SE tRNA 88796 88869 . + . ID=rna-NND05_07700;Parent=gene-NND05_07700;anticodon=(pos:88830..88832);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07700;product=tRNA-Pro JANDXE010000012.1 tRNAscan-SE exon 88796 88869 . + . ID=exon-NND05_07700-1;Parent=rna-NND05_07700;anticodon=(pos:88830..88832);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07700;product=tRNA-Pro JANDXE010000012.1 Genbank gene 88910 88983 . + . ID=gene-NND05_07705;Name=NND05_07705;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_07705 JANDXE010000012.1 tRNAscan-SE tRNA 88910 88983 . + . ID=rna-NND05_07705;Parent=gene-NND05_07705;anticodon=(pos:88944..88946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07705;product=tRNA-Pro JANDXE010000012.1 tRNAscan-SE exon 88910 88983 . + . ID=exon-NND05_07705-1;Parent=rna-NND05_07705;anticodon=(pos:88944..88946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_07705;product=tRNA-Pro JANDXE010000012.1 Genbank gene 89067 89636 . + . ID=gene-NND05_07710;Name=NND05_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07710 JANDXE010000012.1 Protein Homology CDS 89067 89636 . + 0 ID=cds-MCP9537443.1;Parent=gene-NND05_07710;Dbxref=NCBI_GP:MCP9537443.1;Name=MCP9537443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462471.1;locus_tag=NND05_07710;product=cytidylate kinase-like family protein;protein_id=MCP9537443.1;transl_table=11 JANDXE010000012.1 Genbank gene 89695 90054 . + . ID=gene-NND05_07715;Name=NND05_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07715 JANDXE010000012.1 Protein Homology CDS 89695 90054 . + 0 ID=cds-MCP9537444.1;Parent=gene-NND05_07715;Dbxref=NCBI_GP:MCP9537444.1;Name=MCP9537444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849544.1;locus_tag=NND05_07715;product=CidA/LrgA family protein;protein_id=MCP9537444.1;transl_table=11 JANDXE010000012.1 Genbank gene 90051 90743 . + . ID=gene-NND05_07720;Name=NND05_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07720 JANDXE010000012.1 Protein Homology CDS 90051 90743 . + 0 ID=cds-MCP9537445.1;Parent=gene-NND05_07720;Dbxref=NCBI_GP:MCP9537445.1;Name=MCP9537445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844587.1;locus_tag=NND05_07720;product=LrgB family protein;protein_id=MCP9537445.1;transl_table=11 JANDXE010000012.1 Genbank gene 90829 92268 . + . ID=gene-NND05_07725;Name=NND05_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07725 JANDXE010000012.1 Protein Homology CDS 90829 92268 . + 0 ID=cds-MCP9537446.1;Parent=gene-NND05_07725;Dbxref=NCBI_GP:MCP9537446.1;Name=MCP9537446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849546.1;locus_tag=NND05_07725;product=right-handed parallel beta-helix repeat-containing protein;protein_id=MCP9537446.1;transl_table=11 JANDXE010000012.1 Genbank gene 92369 92851 . - . ID=gene-NND05_07730;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=NND05_07730 JANDXE010000012.1 Protein Homology CDS 92369 92851 . - 0 ID=cds-MCP9537447.1;Parent=gene-NND05_07730;Dbxref=NCBI_GP:MCP9537447.1;Name=MCP9537447.1;Ontology_term=GO:0008655,GO:0004126,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371445.1;locus_tag=NND05_07730;product=cytidine deaminase;protein_id=MCP9537447.1;transl_table=11 JANDXE010000012.1 Genbank gene 92928 94217 . - . ID=gene-NND05_07735;Name=NND05_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07735 JANDXE010000012.1 Protein Homology CDS 92928 94217 . - 0 ID=cds-MCP9537448.1;Parent=gene-NND05_07735;Dbxref=NCBI_GP:MCP9537448.1;Name=MCP9537448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345957.1;locus_tag=NND05_07735;product=IgA Peptidase M64;protein_id=MCP9537448.1;transl_table=11 JANDXE010000012.1 Genbank gene 94309 95232 . - . ID=gene-NND05_07740;Name=NND05_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07740 JANDXE010000012.1 Protein Homology CDS 94309 95232 . - 0 ID=cds-MCP9537449.1;Parent=gene-NND05_07740;Dbxref=NCBI_GP:MCP9537449.1;Name=MCP9537449.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849541.1;locus_tag=NND05_07740;product=glucosaminidase domain-containing protein;protein_id=MCP9537449.1;transl_table=11 JANDXE010000012.1 Genbank gene 95314 95703 . + . ID=gene-NND05_07745;Name=NND05_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07745 JANDXE010000012.1 Protein Homology CDS 95314 95703 . + 0 ID=cds-MCP9537450.1;Parent=gene-NND05_07745;Dbxref=NCBI_GP:MCP9537450.1;Name=MCP9537450.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: protein motif:HMM:NF013456.2;locus_tag=NND05_07745;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=MCP9537450.1;transl_table=11 JANDXE010000012.1 Genbank gene 95748 96263 . - . ID=gene-NND05_07750;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=NND05_07750 JANDXE010000012.1 Protein Homology CDS 95748 96263 . - 0 ID=cds-MCP9537451.1;Parent=gene-NND05_07750;Dbxref=NCBI_GP:MCP9537451.1;Name=MCP9537451.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;gene=nrdG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008125484.1;locus_tag=NND05_07750;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=MCP9537451.1;transl_table=11 JANDXE010000012.1 Genbank gene 96269 98491 . - . ID=gene-NND05_07755;Name=NND05_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07755 JANDXE010000012.1 Protein Homology CDS 96269 98491 . - 0 ID=cds-MCP9537452.1;Parent=gene-NND05_07755;Dbxref=NCBI_GP:MCP9537452.1;Name=MCP9537452.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018921010.1;locus_tag=NND05_07755;product=anaerobic ribonucleoside triphosphate reductase;protein_id=MCP9537452.1;transl_table=11 JANDXE010000012.1 Genbank gene 98842 99681 . - . ID=gene-NND05_07760;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=NND05_07760 JANDXE010000012.1 Protein Homology CDS 98842 99681 . - 0 ID=cds-MCP9537453.1;Parent=gene-NND05_07760;Dbxref=NCBI_GP:MCP9537453.1;Name=MCP9537453.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848758.1;locus_tag=NND05_07760;product=type II pantothenate kinase;protein_id=MCP9537453.1;transl_table=11 JANDXE010000012.1 Genbank gene 99774 101240 . - . ID=gene-NND05_07765;Name=NND05_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07765 JANDXE010000012.1 Protein Homology CDS 99774 101240 . - 0 ID=cds-MCP9537454.1;Parent=gene-NND05_07765;Dbxref=NCBI_GP:MCP9537454.1;Name=MCP9537454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346093.1;locus_tag=NND05_07765;product=SLC13 family permease;protein_id=MCP9537454.1;transl_table=11 JANDXE010000012.1 Genbank gene 101487 101771 . + . ID=gene-NND05_07770;Name=NND05_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07770 JANDXE010000012.1 GeneMarkS-2+ CDS 101487 101771 . + 0 ID=cds-MCP9537455.1;Parent=gene-NND05_07770;Dbxref=NCBI_GP:MCP9537455.1;Name=MCP9537455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_07770;product=hypothetical protein;protein_id=MCP9537455.1;transl_table=11 JANDXE010000012.1 Genbank gene 102178 102505 . + . ID=gene-NND05_07775;Name=NND05_07775;end_range=102505,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_07775;partial=true JANDXE010000012.1 cmsearch rRNA 102178 102505 . + . ID=rna-NND05_07775;Parent=gene-NND05_07775;Dbxref=RFAM:RF00177;end_range=102505,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_07775;partial=true;product=16S ribosomal RNA JANDXE010000012.1 cmsearch exon 102178 102505 . + . ID=exon-NND05_07775-1;Parent=rna-NND05_07775;Dbxref=RFAM:RF00177;end_range=102505,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_07775;partial=true;product=16S ribosomal RNA ##sequence-region JANDXE010000013.1 1 48786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000013.1 Genbank region 1 48786 . + . ID=JANDXE010000013.1:1..48786;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000013.1 Genbank gene 1 304 . - . ID=gene-NND05_07780;Name=NND05_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07780;partial=true;start_range=.,1 JANDXE010000013.1 Protein Homology CDS 1 304 . - 0 ID=cds-MCP9537456.1;Parent=gene-NND05_07780;Dbxref=NCBI_GP:MCP9537456.1;Name=MCP9537456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017382.1;locus_tag=NND05_07780;partial=true;product=DUF5119 domain-containing protein;protein_id=MCP9537456.1;start_range=.,1;transl_table=11 JANDXE010000013.1 Genbank gene 310 1614 . - . ID=gene-NND05_07785;Name=NND05_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07785 JANDXE010000013.1 Protein Homology CDS 310 1614 . - 0 ID=cds-MCP9537457.1;Parent=gene-NND05_07785;Dbxref=NCBI_GP:MCP9537457.1;Name=MCP9537457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019150889.1;locus_tag=NND05_07785;product=DUF3575 domain-containing protein;protein_id=MCP9537457.1;transl_table=11 JANDXE010000013.1 Genbank gene 2085 3068 . + . ID=gene-NND05_07790;Name=NND05_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07790 JANDXE010000013.1 Protein Homology CDS 2085 3068 . + 0 ID=cds-MCP9537458.1;Parent=gene-NND05_07790;Dbxref=NCBI_GP:MCP9537458.1;Name=MCP9537458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_07790;product=site-specific integrase;protein_id=MCP9537458.1;transl_table=11 JANDXE010000013.1 Genbank gene 3239 3910 . - . ID=gene-NND05_07795;Name=NND05_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07795 JANDXE010000013.1 Protein Homology CDS 3239 3910 . - 0 ID=cds-MCP9537459.1;Parent=gene-NND05_07795;Dbxref=NCBI_GP:MCP9537459.1;Name=MCP9537459.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359757.1;locus_tag=NND05_07795;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=MCP9537459.1;transl_table=11 JANDXE010000013.1 Genbank gene 3929 4432 . - . ID=gene-NND05_07800;Name=NND05_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07800 JANDXE010000013.1 Protein Homology CDS 3929 4432 . - 0 ID=cds-MCP9537460.1;Parent=gene-NND05_07800;Dbxref=NCBI_GP:MCP9537460.1;Name=MCP9537460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004379420.1;locus_tag=NND05_07800;product=DUF4494 domain-containing protein;protein_id=MCP9537460.1;transl_table=11 JANDXE010000013.1 Genbank gene 4767 5978 . + . ID=gene-NND05_07805;Name=NND05_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07805 JANDXE010000013.1 Protein Homology CDS 4767 5978 . + 0 ID=cds-MCP9537461.1;Parent=gene-NND05_07805;Dbxref=NCBI_GP:MCP9537461.1;Name=MCP9537461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846964.1;locus_tag=NND05_07805;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCP9537461.1;transl_table=11 JANDXE010000013.1 Genbank gene 6066 7313 . + . ID=gene-NND05_07810;Name=NND05_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07810 JANDXE010000013.1 Protein Homology CDS 6066 7313 . + 0 ID=cds-MCP9537462.1;Parent=gene-NND05_07810;Dbxref=NCBI_GP:MCP9537462.1;Name=MCP9537462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370110.1;locus_tag=NND05_07810;product=ABC transporter permease;protein_id=MCP9537462.1;transl_table=11 JANDXE010000013.1 Genbank gene 7526 9193 . + . ID=gene-NND05_07815;Name=NND05_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07815 JANDXE010000013.1 Protein Homology CDS 7526 9193 . + 0 ID=cds-MCP9537463.1;Parent=gene-NND05_07815;Dbxref=NCBI_GP:MCP9537463.1;Name=MCP9537463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376536.1;locus_tag=NND05_07815;product=AMP-binding protein;protein_id=MCP9537463.1;transl_table=11 JANDXE010000013.1 Genbank gene 9279 10943 . + . ID=gene-NND05_07820;Name=NND05_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07820 JANDXE010000013.1 Protein Homology CDS 9279 10943 . + 0 ID=cds-MCP9537464.1;Parent=gene-NND05_07820;Dbxref=NCBI_GP:MCP9537464.1;Name=MCP9537464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846967.1;locus_tag=NND05_07820;product=AMP-binding protein;protein_id=MCP9537464.1;transl_table=11 JANDXE010000013.1 Genbank gene 11028 11627 . - . ID=gene-NND05_07825;Name=NND05_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07825 JANDXE010000013.1 Protein Homology CDS 11028 11627 . - 0 ID=cds-MCP9537465.1;Parent=gene-NND05_07825;Dbxref=NCBI_GP:MCP9537465.1;Name=MCP9537465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846968.1;locus_tag=NND05_07825;product=Crp/Fnr family transcriptional regulator;protein_id=MCP9537465.1;transl_table=11 JANDXE010000013.1 Genbank gene 11673 13466 . - . ID=gene-NND05_07830;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NND05_07830 JANDXE010000013.1 Protein Homology CDS 11673 13466 . - 0 ID=cds-MCP9537466.1;Parent=gene-NND05_07830;Dbxref=NCBI_GP:MCP9537466.1;Name=MCP9537466.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920331.1;locus_tag=NND05_07830;product=translation elongation factor 4;protein_id=MCP9537466.1;transl_table=11 JANDXE010000013.1 Genbank gene 13537 13923 . + . ID=gene-NND05_07835;Name=NND05_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07835 JANDXE010000013.1 Protein Homology CDS 13537 13923 . + 0 ID=cds-MCP9537467.1;Parent=gene-NND05_07835;Dbxref=NCBI_GP:MCP9537467.1;Name=MCP9537467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846970.1;locus_tag=NND05_07835;product=hypothetical protein;protein_id=MCP9537467.1;transl_table=11 JANDXE010000013.1 Genbank gene 13969 14253 . - . ID=gene-NND05_07840;Name=NND05_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07840 JANDXE010000013.1 Protein Homology CDS 13969 14253 . - 0 ID=cds-MCP9537468.1;Parent=gene-NND05_07840;Dbxref=NCBI_GP:MCP9537468.1;Name=MCP9537468.1;Ontology_term=GO:0008150,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846971.1;locus_tag=NND05_07840;product=TIGR03905 family TSCPD domain-containing protein;protein_id=MCP9537468.1;transl_table=11 JANDXE010000013.1 Genbank gene 14561 15298 . - . ID=gene-NND05_07845;Name=NND05_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07845 JANDXE010000013.1 Protein Homology CDS 14561 15298 . - 0 ID=cds-MCP9537469.1;Parent=gene-NND05_07845;Dbxref=NCBI_GP:MCP9537469.1;Name=MCP9537469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065643.1;locus_tag=NND05_07845;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=MCP9537469.1;transl_table=11 JANDXE010000013.1 Genbank gene 15373 17841 . - . ID=gene-NND05_07850;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=NND05_07850 JANDXE010000013.1 Protein Homology CDS 15373 17841 . - 0 ID=cds-MCP9537470.1;Parent=gene-NND05_07850;Dbxref=NCBI_GP:MCP9537470.1;Name=MCP9537470.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822555.1;locus_tag=NND05_07850;product=phenylalanine--tRNA ligase subunit beta;protein_id=MCP9537470.1;transl_table=11 JANDXE010000013.1 Genbank gene 18258 20588 . - . ID=gene-NND05_07855;Name=NND05_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07855 JANDXE010000013.1 Protein Homology CDS 18258 20588 . - 0 ID=cds-MCP9537471.1;Parent=gene-NND05_07855;Dbxref=NCBI_GP:MCP9537471.1;Name=MCP9537471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412178.1;locus_tag=NND05_07855;product=transglycosylase domain-containing protein;protein_id=MCP9537471.1;transl_table=11 JANDXE010000013.1 Genbank gene 20704 21651 . + . ID=gene-NND05_07860;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=NND05_07860 JANDXE010000013.1 Protein Homology CDS 20704 21651 . + 0 ID=cds-MCP9537472.1;Parent=gene-NND05_07860;Dbxref=NCBI_GP:MCP9537472.1;Name=MCP9537472.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342863.1;locus_tag=NND05_07860;product=aspartate carbamoyltransferase;protein_id=MCP9537472.1;transl_table=11 JANDXE010000013.1 Genbank gene 21682 22146 . + . ID=gene-NND05_07865;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=NND05_07865 JANDXE010000013.1 Protein Homology CDS 21682 22146 . + 0 ID=cds-MCP9537473.1;Parent=gene-NND05_07865;Dbxref=NCBI_GP:MCP9537473.1;Name=MCP9537473.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846976.1;locus_tag=NND05_07865;product=aspartate carbamoyltransferase regulatory subunit;protein_id=MCP9537473.1;transl_table=11 JANDXE010000013.1 Genbank gene 22172 23452 . + . ID=gene-NND05_07870;Name=NND05_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07870 JANDXE010000013.1 Protein Homology CDS 22172 23452 . + 0 ID=cds-MCP9537474.1;Parent=gene-NND05_07870;Dbxref=NCBI_GP:MCP9537474.1;Name=MCP9537474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920153.1;locus_tag=NND05_07870;product=serine hydroxymethyltransferase;protein_id=MCP9537474.1;transl_table=11 JANDXE010000013.1 Genbank gene 23844 24590 . + . ID=gene-NND05_07875;Name=NND05_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07875 JANDXE010000013.1 Protein Homology CDS 23844 24590 . + 0 ID=cds-MCP9537475.1;Parent=gene-NND05_07875;Dbxref=NCBI_GP:MCP9537475.1;Name=MCP9537475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846978.1;locus_tag=NND05_07875;product=DUF5020 family protein;protein_id=MCP9537475.1;transl_table=11 JANDXE010000013.1 Genbank gene 24830 25699 . - . ID=gene-NND05_07880;Name=NND05_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07880 JANDXE010000013.1 Protein Homology CDS 24830 25699 . - 0 ID=cds-MCP9537476.1;Parent=gene-NND05_07880;Dbxref=NCBI_GP:MCP9537476.1;Name=MCP9537476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022441.2;locus_tag=NND05_07880;product=DUF2807 domain-containing protein;protein_id=MCP9537476.1;transl_table=11 JANDXE010000013.1 Genbank gene 26074 26805 . - . ID=gene-NND05_07885;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=NND05_07885 JANDXE010000013.1 Protein Homology CDS 26074 26805 . - 0 ID=cds-MCP9537477.1;Parent=gene-NND05_07885;Dbxref=NCBI_GP:MCP9537477.1;Name=MCP9537477.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846989.1;locus_tag=NND05_07885;product=pyruvate formate-lyase-activating protein;protein_id=MCP9537477.1;transl_table=11 JANDXE010000013.1 Genbank gene 26882 29128 . - . ID=gene-NND05_07890;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=NND05_07890 JANDXE010000013.1 Protein Homology CDS 26882 29128 . - 0 ID=cds-MCP9537478.1;Parent=gene-NND05_07890;Dbxref=NCBI_GP:MCP9537478.1;Name=MCP9537478.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012539.1;locus_tag=NND05_07890;product=formate C-acetyltransferase;protein_id=MCP9537478.1;transl_table=11 JANDXE010000013.1 Genbank gene 29779 31443 . + . ID=gene-NND05_07895;Name=NND05_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07895 JANDXE010000013.1 Protein Homology CDS 29779 31443 . + 0 ID=cds-MCP9537479.1;Parent=gene-NND05_07895;Dbxref=NCBI_GP:MCP9537479.1;Name=MCP9537479.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008022575.1;locus_tag=NND05_07895;product=formate--tetrahydrofolate ligase;protein_id=MCP9537479.1;transl_table=11 JANDXE010000013.1 Genbank gene 31492 32025 . - . ID=gene-NND05_07900;Name=NND05_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07900 JANDXE010000013.1 Protein Homology CDS 31492 32025 . - 0 ID=cds-MCP9537480.1;Parent=gene-NND05_07900;Dbxref=NCBI_GP:MCP9537480.1;Name=MCP9537480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846994.1;locus_tag=NND05_07900;product=epoxyqueuosine reductase QueH;protein_id=MCP9537480.1;transl_table=11 JANDXE010000013.1 Genbank gene 32482 33618 . - . ID=gene-NND05_07905;Name=NND05_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07905 JANDXE010000013.1 Protein Homology CDS 32482 33618 . - 0 ID=cds-MCP9537481.1;Parent=gene-NND05_07905;Dbxref=NCBI_GP:MCP9537481.1;Name=MCP9537481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846995.1;locus_tag=NND05_07905;product=metallophosphoesterase;protein_id=MCP9537481.1;transl_table=11 JANDXE010000013.1 Genbank gene 33863 34567 . + . ID=gene-NND05_07910;Name=NND05_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07910 JANDXE010000013.1 Protein Homology CDS 33863 34567 . + 0 ID=cds-MCP9537482.1;Parent=gene-NND05_07910;Dbxref=NCBI_GP:MCP9537482.1;Name=MCP9537482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847341.1;locus_tag=NND05_07910;product=NigD-like protein;protein_id=MCP9537482.1;transl_table=11 JANDXE010000013.1 Genbank gene 34812 35057 . + . ID=gene-NND05_07915;Name=NND05_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07915 JANDXE010000013.1 Protein Homology CDS 34812 35057 . + 0 ID=cds-MCP9537483.1;Parent=gene-NND05_07915;Dbxref=NCBI_GP:MCP9537483.1;Name=MCP9537483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772246.1;locus_tag=NND05_07915;product=DUF3791 domain-containing protein;protein_id=MCP9537483.1;transl_table=11 JANDXE010000013.1 Genbank gene 35057 35545 . + . ID=gene-NND05_07920;Name=NND05_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07920 JANDXE010000013.1 Protein Homology CDS 35057 35545 . + 0 ID=cds-MCP9537484.1;Parent=gene-NND05_07920;Dbxref=NCBI_GP:MCP9537484.1;Name=MCP9537484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900866.1;locus_tag=NND05_07920;product=DUF3990 domain-containing protein;protein_id=MCP9537484.1;transl_table=11 JANDXE010000013.1 Genbank gene 35526 35777 . + . ID=gene-NND05_07925;Name=NND05_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07925 JANDXE010000013.1 Protein Homology CDS 35526 35777 . + 0 ID=cds-MCP9537485.1;Parent=gene-NND05_07925;Dbxref=NCBI_GP:MCP9537485.1;Name=MCP9537485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004315340.1;locus_tag=NND05_07925;product=hypothetical protein;protein_id=MCP9537485.1;transl_table=11 JANDXE010000013.1 Genbank gene 35774 36280 . - . ID=gene-NND05_07930;Name=NND05_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07930 JANDXE010000013.1 Protein Homology CDS 35774 36280 . - 0 ID=cds-MCP9537486.1;Parent=gene-NND05_07930;Dbxref=NCBI_GP:MCP9537486.1;Name=MCP9537486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901614.1;locus_tag=NND05_07930;product=very short patch repair endonuclease;protein_id=MCP9537486.1;transl_table=11 JANDXE010000013.1 Genbank gene 37053 37826 . - . ID=gene-NND05_07935;Name=NND05_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07935 JANDXE010000013.1 Protein Homology CDS 37053 37826 . - 0 ID=cds-MCP9537487.1;Parent=gene-NND05_07935;Dbxref=NCBI_GP:MCP9537487.1;Name=MCP9537487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007575041.1;locus_tag=NND05_07935;product=HNH endonuclease;protein_id=MCP9537487.1;transl_table=11 JANDXE010000013.1 Genbank gene 37846 38238 . - . ID=gene-NND05_07940;Name=NND05_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07940 JANDXE010000013.1 Protein Homology CDS 37846 38238 . - 0 ID=cds-MCP9537488.1;Parent=gene-NND05_07940;Dbxref=NCBI_GP:MCP9537488.1;Name=MCP9537488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011203134.1;locus_tag=NND05_07940;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=MCP9537488.1;transl_table=11 JANDXE010000013.1 Genbank gene 38284 41055 . - . ID=gene-NND05_07945;Name=NND05_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07945 JANDXE010000013.1 Protein Homology CDS 38284 41055 . - 0 ID=cds-MCP9537489.1;Parent=gene-NND05_07945;Dbxref=NCBI_GP:MCP9537489.1;Name=MCP9537489.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023335.2;locus_tag=NND05_07945;product=DUF3427 domain-containing protein;protein_id=MCP9537489.1;transl_table=11 JANDXE010000013.1 Genbank gene 41404 42513 . - . ID=gene-NND05_07950;Name=NND05_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07950 JANDXE010000013.1 Protein Homology CDS 41404 42513 . - 0 ID=cds-MCP9537490.1;Parent=gene-NND05_07950;Dbxref=NCBI_GP:MCP9537490.1;Name=MCP9537490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007660269.1;locus_tag=NND05_07950;product=Fic family protein;protein_id=MCP9537490.1;transl_table=11 JANDXE010000013.1 Genbank gene 43003 44322 . - . ID=gene-NND05_07955;Name=NND05_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07955 JANDXE010000013.1 Protein Homology CDS 43003 44322 . - 0 ID=cds-MCP9537491.1;Parent=gene-NND05_07955;Dbxref=NCBI_GP:MCP9537491.1;Name=MCP9537491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547331.1;locus_tag=NND05_07955;product=AAA family ATPase;protein_id=MCP9537491.1;transl_table=11 JANDXE010000013.1 Genbank gene 44922 47126 . - . ID=gene-NND05_07960;Name=NND05_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07960 JANDXE010000013.1 Protein Homology CDS 44922 47126 . - 0 ID=cds-MCP9537492.1;Parent=gene-NND05_07960;Dbxref=NCBI_GP:MCP9537492.1;Name=MCP9537492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919734.1;locus_tag=NND05_07960;product=sodium-translocating pyrophosphatase;protein_id=MCP9537492.1;transl_table=11 JANDXE010000013.1 Genbank gene 47356 48696 . + . ID=gene-NND05_07965;Name=NND05_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07965 JANDXE010000013.1 Protein Homology CDS 47356 48696 . + 0 ID=cds-MCP9537493.1;Parent=gene-NND05_07965;Dbxref=NCBI_GP:MCP9537493.1;Name=MCP9537493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847306.1;locus_tag=NND05_07965;product=MATE family efflux transporter;protein_id=MCP9537493.1;transl_table=11 ##sequence-region JANDXE010000014.1 1 52311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000014.1 Genbank region 1 52311 . + . ID=JANDXE010000014.1:1..52311;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000014.1 Genbank gene 66 515 . - . ID=gene-NND05_07970;Name=NND05_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07970 JANDXE010000014.1 Protein Homology CDS 66 515 . - 0 ID=cds-MCP9537494.1;Parent=gene-NND05_07970;Dbxref=NCBI_GP:MCP9537494.1;Name=MCP9537494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920832.1;locus_tag=NND05_07970;product=DUF5606 domain-containing protein;protein_id=MCP9537494.1;transl_table=11 JANDXE010000014.1 Genbank gene 551 1126 . - . ID=gene-NND05_07975;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NND05_07975 JANDXE010000014.1 Protein Homology CDS 551 1126 . - 0 ID=cds-MCP9537495.1;Parent=gene-NND05_07975;Dbxref=NCBI_GP:MCP9537495.1;Name=MCP9537495.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434810.1;locus_tag=NND05_07975;product=dephospho-CoA kinase;protein_id=MCP9537495.1;transl_table=11 JANDXE010000014.1 Genbank gene 1160 2128 . - . ID=gene-NND05_07980;Name=NND05_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07980 JANDXE010000014.1 Protein Homology CDS 1160 2128 . - 0 ID=cds-MCP9537496.1;Parent=gene-NND05_07980;Dbxref=NCBI_GP:MCP9537496.1;Name=MCP9537496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847302.1;locus_tag=NND05_07980;product=CdaR family protein;protein_id=MCP9537496.1;transl_table=11 JANDXE010000014.1 Genbank gene 2147 2464 . - . ID=gene-NND05_07985;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NND05_07985 JANDXE010000014.1 Protein Homology CDS 2147 2464 . - 0 ID=cds-MCP9537497.1;Parent=gene-NND05_07985;Dbxref=NCBI_GP:MCP9537497.1;Name=MCP9537497.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846292.1;locus_tag=NND05_07985;product=preprotein translocase subunit YajC;protein_id=MCP9537497.1;transl_table=11 JANDXE010000014.1 Genbank gene 2576 3583 . - . ID=gene-NND05_07990;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NND05_07990 JANDXE010000014.1 Protein Homology CDS 2576 3583 . - 0 ID=cds-MCP9537498.1;Parent=gene-NND05_07990;Dbxref=NCBI_GP:MCP9537498.1;Name=MCP9537498.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846290.1;locus_tag=NND05_07990;product=transcription antitermination factor NusB;protein_id=MCP9537498.1;transl_table=11 JANDXE010000014.1 Genbank gene 3894 4499 . + . ID=gene-NND05_07995;Name=NND05_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_07995 JANDXE010000014.1 Protein Homology CDS 3894 4499 . + 0 ID=cds-MCP9537499.1;Parent=gene-NND05_07995;Dbxref=NCBI_GP:MCP9537499.1;Name=MCP9537499.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847298.1;locus_tag=NND05_07995;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=MCP9537499.1;transl_table=11 JANDXE010000014.1 Genbank gene 4549 5121 . + . ID=gene-NND05_08000;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=NND05_08000 JANDXE010000014.1 Protein Homology CDS 4549 5121 . + 0 ID=cds-MCP9537500.1;Parent=gene-NND05_08000;Dbxref=NCBI_GP:MCP9537500.1;Name=MCP9537500.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004335623.1;locus_tag=NND05_08000;product=aminoacyl-tRNA hydrolase;protein_id=MCP9537500.1;transl_table=11 JANDXE010000014.1 Genbank gene 5124 5546 . + . ID=gene-NND05_08005;Name=NND05_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08005 JANDXE010000014.1 Protein Homology CDS 5124 5546 . + 0 ID=cds-MCP9537501.1;Parent=gene-NND05_08005;Dbxref=NCBI_GP:MCP9537501.1;Name=MCP9537501.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847296.1;locus_tag=NND05_08005;product=S4 domain-containing protein;protein_id=MCP9537501.1;transl_table=11 JANDXE010000014.1 Genbank gene 5830 6360 . + . ID=gene-NND05_08010;Name=NND05_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08010 JANDXE010000014.1 Protein Homology CDS 5830 6360 . + 0 ID=cds-MCP9537502.1;Parent=gene-NND05_08010;Dbxref=NCBI_GP:MCP9537502.1;Name=MCP9537502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378400.1;locus_tag=NND05_08010;product=PorT family protein;protein_id=MCP9537502.1;transl_table=11 JANDXE010000014.1 Genbank gene 6534 9449 . - . ID=gene-NND05_08015;Name=NND05_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08015 JANDXE010000014.1 Protein Homology CDS 6534 9449 . - 0 ID=cds-MCP9537503.1;Parent=gene-NND05_08015;Dbxref=NCBI_GP:MCP9537503.1;Name=MCP9537503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173742.1;locus_tag=NND05_08015;product=outer membrane beta-barrel protein;protein_id=MCP9537503.1;transl_table=11 JANDXE010000014.1 Genbank gene 9726 10772 . + . ID=gene-NND05_08020;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NND05_08020 JANDXE010000014.1 Protein Homology CDS 9726 10772 . + 0 ID=cds-MCP9537504.1;Parent=gene-NND05_08020;Dbxref=NCBI_GP:MCP9537504.1;Name=MCP9537504.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847291.1;locus_tag=NND05_08020;product=3-dehydroquinate synthase;protein_id=MCP9537504.1;transl_table=11 JANDXE010000014.1 Genbank gene 10759 11772 . - . ID=gene-NND05_08025;Name=NND05_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08025 JANDXE010000014.1 Protein Homology CDS 10759 11772 . - 0 ID=cds-MCP9537505.1;Parent=gene-NND05_08025;Dbxref=NCBI_GP:MCP9537505.1;Name=MCP9537505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847290.1;locus_tag=NND05_08025;product=AMP-binding protein;protein_id=MCP9537505.1;transl_table=11 JANDXE010000014.1 Genbank gene 11876 12952 . - . ID=gene-NND05_08030;Name=NND05_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08030 JANDXE010000014.1 Protein Homology CDS 11876 12952 . - 0 ID=cds-MCP9537506.1;Parent=gene-NND05_08030;Dbxref=NCBI_GP:MCP9537506.1;Name=MCP9537506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920128.1;locus_tag=NND05_08030;product=o-succinylbenzoate synthase;protein_id=MCP9537506.1;transl_table=11 JANDXE010000014.1 Genbank gene 12997 14526 . - . ID=gene-NND05_08035;Name=NND05_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08035 JANDXE010000014.1 Protein Homology CDS 12997 14526 . - 0 ID=cds-MCP9537507.1;Parent=gene-NND05_08035;Dbxref=NCBI_GP:MCP9537507.1;Name=MCP9537507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277639.1;locus_tag=NND05_08035;product=bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein;protein_id=MCP9537507.1;transl_table=11 JANDXE010000014.1 Genbank gene 14671 16401 . - . ID=gene-NND05_08040;Name=NND05_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08040 JANDXE010000014.1 Protein Homology CDS 14671 16401 . - 0 ID=cds-MCP9537508.1;Parent=gene-NND05_08040;Dbxref=NCBI_GP:MCP9537508.1;Name=MCP9537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847287.1;locus_tag=NND05_08040;product=lipid A phosphoethanolamine transferase;protein_id=MCP9537508.1;transl_table=11 JANDXE010000014.1 Genbank gene 16495 17664 . - . ID=gene-NND05_08045;Name=NND05_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08045 JANDXE010000014.1 Protein Homology CDS 16495 17664 . - 0 ID=cds-MCP9537509.1;Parent=gene-NND05_08045;Dbxref=NCBI_GP:MCP9537509.1;Name=MCP9537509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012056003.1;locus_tag=NND05_08045;product=outer membrane protein assembly factor;protein_id=MCP9537509.1;transl_table=11 JANDXE010000014.1 Genbank gene 17684 18646 . - . ID=gene-NND05_08050;Name=NND05_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08050 JANDXE010000014.1 Protein Homology CDS 17684 18646 . - 0 ID=cds-MCP9537510.1;Parent=gene-NND05_08050;Dbxref=NCBI_GP:MCP9537510.1;Name=MCP9537510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847285.1;locus_tag=NND05_08050;product=PCMD domain-containing protein;protein_id=MCP9537510.1;transl_table=11 JANDXE010000014.1 Genbank gene 18842 19975 . - . ID=gene-NND05_08055;Name=NND05_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08055 JANDXE010000014.1 Protein Homology CDS 18842 19975 . - 0 ID=cds-MCP9537511.1;Parent=gene-NND05_08055;Dbxref=NCBI_GP:MCP9537511.1;Name=MCP9537511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847283.1;locus_tag=NND05_08055;product=dTDP-glucose 4%2C6-dehydratase;protein_id=MCP9537511.1;transl_table=11 JANDXE010000014.1 Genbank gene 19999 20871 . - . ID=gene-NND05_08060;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NND05_08060 JANDXE010000014.1 Protein Homology CDS 19999 20871 . - 0 ID=cds-MCP9537512.1;Parent=gene-NND05_08060;Dbxref=NCBI_GP:MCP9537512.1;Name=MCP9537512.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007842531.1;locus_tag=NND05_08060;product=dTDP-4-dehydrorhamnose reductase;protein_id=MCP9537512.1;transl_table=11 JANDXE010000014.1 Genbank gene 21499 23115 . + . ID=gene-NND05_08065;Name=NND05_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08065 JANDXE010000014.1 Protein Homology CDS 21499 23115 . + 0 ID=cds-MCP9537513.1;Parent=gene-NND05_08065;Dbxref=NCBI_GP:MCP9537513.1;Name=MCP9537513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847552.1;locus_tag=NND05_08065;product=DUF6377 domain-containing protein;protein_id=MCP9537513.1;transl_table=11 JANDXE010000014.1 Genbank gene 23164 23916 . - . ID=gene-NND05_08070;Name=NND05_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08070 JANDXE010000014.1 Protein Homology CDS 23164 23916 . - 0 ID=cds-MCP9537514.1;Parent=gene-NND05_08070;Dbxref=NCBI_GP:MCP9537514.1;Name=MCP9537514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361140.1;locus_tag=NND05_08070;product=SDR family oxidoreductase;protein_id=MCP9537514.1;transl_table=11 JANDXE010000014.1 Genbank gene 24001 24579 . - . ID=gene-NND05_08075;Name=NND05_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08075 JANDXE010000014.1 Protein Homology CDS 24001 24579 . - 0 ID=cds-MCP9537515.1;Parent=gene-NND05_08075;Dbxref=NCBI_GP:MCP9537515.1;Name=MCP9537515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377464.1;locus_tag=NND05_08075;product=histidine phosphatase family protein;protein_id=MCP9537515.1;transl_table=11 JANDXE010000014.1 Genbank gene 24805 25410 . + . ID=gene-NND05_08080;Name=NND05_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08080 JANDXE010000014.1 Protein Homology CDS 24805 25410 . + 0 ID=cds-MCP9537516.1;Parent=gene-NND05_08080;Dbxref=NCBI_GP:MCP9537516.1;Name=MCP9537516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847278.1;locus_tag=NND05_08080;product=DUF308 domain-containing protein;protein_id=MCP9537516.1;transl_table=11 JANDXE010000014.1 Genbank gene 25503 26126 . - . ID=gene-NND05_08085;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=NND05_08085 JANDXE010000014.1 Protein Homology CDS 25503 26126 . - 0 ID=cds-MCP9537517.1;Parent=gene-NND05_08085;Dbxref=NCBI_GP:MCP9537517.1;Name=MCP9537517.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898320.1;locus_tag=NND05_08085;product=uridine kinase;protein_id=MCP9537517.1;transl_table=11 JANDXE010000014.1 Genbank gene 26132 26707 . - . ID=gene-NND05_08090;Name=NND05_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08090 JANDXE010000014.1 Protein Homology CDS 26132 26707 . - 0 ID=cds-MCP9537518.1;Parent=gene-NND05_08090;Dbxref=NCBI_GP:MCP9537518.1;Name=MCP9537518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337738.1;locus_tag=NND05_08090;product=uracil-DNA glycosylase family protein;protein_id=MCP9537518.1;transl_table=11 JANDXE010000014.1 Genbank gene 26710 27774 . - . ID=gene-NND05_08095;Name=NND05_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08095 JANDXE010000014.1 Protein Homology CDS 26710 27774 . - 0 ID=cds-MCP9537519.1;Parent=gene-NND05_08095;Dbxref=NCBI_GP:MCP9537519.1;Name=MCP9537519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847268.1;locus_tag=NND05_08095;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MCP9537519.1;transl_table=11 JANDXE010000014.1 Genbank gene 28161 28412 . + . ID=gene-NND05_08100;Name=NND05_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08100 JANDXE010000014.1 Protein Homology CDS 28161 28412 . + 0 ID=cds-MCP9537520.1;Parent=gene-NND05_08100;Dbxref=NCBI_GP:MCP9537520.1;Name=MCP9537520.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463660.1;locus_tag=NND05_08100;product=type B 50S ribosomal protein L31;protein_id=MCP9537520.1;transl_table=11 JANDXE010000014.1 Genbank gene 28511 29248 . - . ID=gene-NND05_08105;Name=NND05_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08105 JANDXE010000014.1 GeneMarkS-2+ CDS 28511 29248 . - 0 ID=cds-MCP9537521.1;Parent=gene-NND05_08105;Dbxref=NCBI_GP:MCP9537521.1;Name=MCP9537521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08105;product=hypothetical protein;protein_id=MCP9537521.1;transl_table=11 JANDXE010000014.1 Genbank gene 29496 33551 . + . ID=gene-NND05_08110;Name=NND05_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08110 JANDXE010000014.1 Protein Homology CDS 29496 33551 . + 0 ID=cds-MCP9537522.1;Parent=gene-NND05_08110;Dbxref=NCBI_GP:MCP9537522.1;Name=MCP9537522.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_08110;product=response regulator;protein_id=MCP9537522.1;transl_table=11 JANDXE010000014.1 Genbank gene 34113 34667 . + . ID=gene-NND05_08115;Name=NND05_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08115 JANDXE010000014.1 Protein Homology CDS 34113 34667 . + 0 ID=cds-MCP9537523.1;Parent=gene-NND05_08115;Dbxref=NCBI_GP:MCP9537523.1;Name=MCP9537523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281787.1;locus_tag=NND05_08115;product=glutathione peroxidase;protein_id=MCP9537523.1;transl_table=11 JANDXE010000014.1 Genbank gene 34751 36112 . - . ID=gene-NND05_08120;Name=NND05_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08120 JANDXE010000014.1 Protein Homology CDS 34751 36112 . - 0 ID=cds-MCP9537524.1;Parent=gene-NND05_08120;Dbxref=NCBI_GP:MCP9537524.1;Name=MCP9537524.1;Ontology_term=GO:0000162,GO:0006568,GO:0004834,GO:0030170;gbkey=CDS;go_function=tryptophan synthase activity|0004834||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=tryptophan biosynthetic process|0000162||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847255.1;locus_tag=NND05_08120;product=TrpB-like pyridoxal phosphate-dependent enzyme;protein_id=MCP9537524.1;transl_table=11 JANDXE010000014.1 Genbank gene 36499 39945 . - . ID=gene-NND05_08125;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=NND05_08125 JANDXE010000014.1 Protein Homology CDS 36499 39945 . - 0 ID=cds-MCP9537525.1;Parent=gene-NND05_08125;Dbxref=NCBI_GP:MCP9537525.1;Name=MCP9537525.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847254.1;locus_tag=NND05_08125;product=transcription-repair coupling factor;protein_id=MCP9537525.1;transl_table=11 JANDXE010000014.1 Genbank gene 39948 40691 . - . ID=gene-NND05_08130;Name=NND05_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08130 JANDXE010000014.1 Protein Homology CDS 39948 40691 . - 0 ID=cds-MCP9537526.1;Parent=gene-NND05_08130;Dbxref=NCBI_GP:MCP9537526.1;Name=MCP9537526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006045355.1;locus_tag=NND05_08130;product=polyprenol monophosphomannose synthase;protein_id=MCP9537526.1;transl_table=11 JANDXE010000014.1 Genbank gene 40709 41467 . - . ID=gene-NND05_08135;Name=NND05_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08135 JANDXE010000014.1 Protein Homology CDS 40709 41467 . - 0 ID=cds-MCP9537527.1;Parent=gene-NND05_08135;Dbxref=NCBI_GP:MCP9537527.1;Name=MCP9537527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377374.1;locus_tag=NND05_08135;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=MCP9537527.1;transl_table=11 JANDXE010000014.1 Genbank gene 41512 42744 . - . ID=gene-NND05_08140;Name=NND05_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08140 JANDXE010000014.1 Protein Homology CDS 41512 42744 . - 0 ID=cds-MCP9537528.1;Parent=gene-NND05_08140;Dbxref=NCBI_GP:MCP9537528.1;Name=MCP9537528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340263.1;locus_tag=NND05_08140;product=metallophosphoesterase;protein_id=MCP9537528.1;transl_table=11 JANDXE010000014.1 Genbank gene 42807 43637 . - . ID=gene-NND05_08145;Name=NND05_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08145 JANDXE010000014.1 Protein Homology CDS 42807 43637 . - 0 ID=cds-MCP9537529.1;Parent=gene-NND05_08145;Dbxref=NCBI_GP:MCP9537529.1;Name=MCP9537529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009162903.1;locus_tag=NND05_08145;product=5-methyltetrahydrofolate--homocysteine methyltransferase;protein_id=MCP9537529.1;transl_table=11 JANDXE010000014.1 Genbank gene 43624 45027 . - . ID=gene-NND05_08150;Name=NND05_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08150 JANDXE010000014.1 Protein Homology CDS 43624 45027 . - 0 ID=cds-MCP9537530.1;Parent=gene-NND05_08150;Dbxref=NCBI_GP:MCP9537530.1;Name=MCP9537530.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007368235.1;locus_tag=NND05_08150;product=dihydroorotase;protein_id=MCP9537530.1;transl_table=11 JANDXE010000014.1 Genbank gene 45055 45876 . - . ID=gene-NND05_08155;Name=NND05_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08155 JANDXE010000014.1 Protein Homology CDS 45055 45876 . - 0 ID=cds-MCP9537531.1;Parent=gene-NND05_08155;Dbxref=NCBI_GP:MCP9537531.1;Name=MCP9537531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847248.1;locus_tag=NND05_08155;product=DUF4369 domain-containing protein;protein_id=MCP9537531.1;transl_table=11 JANDXE010000014.1 Genbank gene 45977 46402 . - . ID=gene-NND05_08160;Name=NND05_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08160 JANDXE010000014.1 Protein Homology CDS 45977 46402 . - 0 ID=cds-MCP9537532.1;Parent=gene-NND05_08160;Dbxref=NCBI_GP:MCP9537532.1;Name=MCP9537532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847247.1;locus_tag=NND05_08160;product=hypothetical protein;protein_id=MCP9537532.1;transl_table=11 JANDXE010000014.1 Genbank gene 46469 46825 . - . ID=gene-NND05_08165;Name=NND05_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08165 JANDXE010000014.1 Protein Homology CDS 46469 46825 . - 0 ID=cds-MCP9537533.1;Parent=gene-NND05_08165;Dbxref=NCBI_GP:MCP9537533.1;Name=MCP9537533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847246.1;locus_tag=NND05_08165;product=septum formation initiator family protein;protein_id=MCP9537533.1;transl_table=11 JANDXE010000014.1 Genbank gene 46926 48725 . + . ID=gene-NND05_08170;Name=NND05_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08170 JANDXE010000014.1 Protein Homology CDS 46926 48725 . + 0 ID=cds-MCP9537534.1;Parent=gene-NND05_08170;Dbxref=NCBI_GP:MCP9537534.1;Name=MCP9537534.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377382.1;locus_tag=NND05_08170;product=DNA polymerase III subunit gamma/tau;protein_id=MCP9537534.1;transl_table=11 JANDXE010000014.1 Genbank gene 48749 50059 . + . ID=gene-NND05_08175;Name=NND05_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08175 JANDXE010000014.1 Protein Homology CDS 48749 50059 . + 0 ID=cds-MCP9537535.1;Parent=gene-NND05_08175;Dbxref=NCBI_GP:MCP9537535.1;Name=MCP9537535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846997.1;locus_tag=NND05_08175;product=beta-lactamase family protein;protein_id=MCP9537535.1;transl_table=11 JANDXE010000014.1 Genbank gene 50886 51119 . - . ID=gene-NND05_08180;Name=NND05_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08180 JANDXE010000014.1 Protein Homology CDS 50886 51119 . - 0 ID=cds-MCP9537536.1;Parent=gene-NND05_08180;Dbxref=NCBI_GP:MCP9537536.1;Name=MCP9537536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008781578.1;locus_tag=NND05_08180;product=DUF4248 domain-containing protein;protein_id=MCP9537536.1;transl_table=11 JANDXE010000014.1 Genbank gene 51123 52286 . - . ID=gene-NND05_08185;Name=NND05_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08185 JANDXE010000014.1 Protein Homology CDS 51123 52286 . - 0 ID=cds-MCP9537537.1;Parent=gene-NND05_08185;Dbxref=NCBI_GP:MCP9537537.1;Name=MCP9537537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013235.2;locus_tag=NND05_08185;product=replication initiation protein;protein_id=MCP9537537.1;transl_table=11 ##sequence-region JANDXE010000015.1 1 91609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000015.1 Genbank region 1 91609 . + . ID=JANDXE010000015.1:1..91609;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000015.1 Genbank gene 426 1148 . + . ID=gene-NND05_08190;Name=NND05_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08190 JANDXE010000015.1 Protein Homology CDS 426 1148 . + 0 ID=cds-MCP9537538.1;Parent=gene-NND05_08190;Dbxref=NCBI_GP:MCP9537538.1;Name=MCP9537538.1;Ontology_term=GO:0003723,GO:0004826;gbkey=CDS;go_function=RNA binding|0003723||IEA,phenylalanine-tRNA ligase activity|0004826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574804.1;locus_tag=NND05_08190;product=phenylalanine--tRNA ligase beta subunit-related protein;protein_id=MCP9537538.1;transl_table=11 JANDXE010000015.1 Genbank gene 1873 2388 . - . ID=gene-NND05_08195;Name=NND05_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08195 JANDXE010000015.1 Protein Homology CDS 1873 2388 . - 0 ID=cds-MCP9537539.1;Parent=gene-NND05_08195;Dbxref=NCBI_GP:MCP9537539.1;Name=MCP9537539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006950301.1;locus_tag=NND05_08195;product=hypothetical protein;protein_id=MCP9537539.1;transl_table=11 JANDXE010000015.1 Genbank gene 2421 3137 . - . ID=gene-NND05_08200;Name=NND05_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08200 JANDXE010000015.1 Protein Homology CDS 2421 3137 . - 0 ID=cds-MCP9537540.1;Parent=gene-NND05_08200;Dbxref=NCBI_GP:MCP9537540.1;Name=MCP9537540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027719.2;locus_tag=NND05_08200;product=DUF5012 domain-containing protein;protein_id=MCP9537540.1;transl_table=11 JANDXE010000015.1 Genbank gene 3181 4674 . - . ID=gene-NND05_08205;Name=NND05_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08205 JANDXE010000015.1 Protein Homology CDS 3181 4674 . - 0 ID=cds-MCP9537541.1;Parent=gene-NND05_08205;Dbxref=NCBI_GP:MCP9537541.1;Name=MCP9537541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018968315.1;locus_tag=NND05_08205;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=MCP9537541.1;transl_table=11 JANDXE010000015.1 Genbank gene 4688 7843 . - . ID=gene-NND05_08210;Name=NND05_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08210 JANDXE010000015.1 Protein Homology CDS 4688 7843 . - 0 ID=cds-MCP9537542.1;Parent=gene-NND05_08210;Dbxref=NCBI_GP:MCP9537542.1;Name=MCP9537542.1;Ontology_term=GO:0071702,GO:0022857,GO:0045203;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=organic substance transport|0071702||IEA;inference=COORDINATES: protein motif:HMM:TIGR04056.1;locus_tag=NND05_08210;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=MCP9537542.1;transl_table=11 JANDXE010000015.1 Genbank gene 7977 8228 . - . ID=gene-NND05_08215;Name=NND05_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08215 JANDXE010000015.1 GeneMarkS-2+ CDS 7977 8228 . - 0 ID=cds-MCP9537543.1;Parent=gene-NND05_08215;Dbxref=NCBI_GP:MCP9537543.1;Name=MCP9537543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08215;product=hypothetical protein;protein_id=MCP9537543.1;transl_table=11 JANDXE010000015.1 Genbank gene 8285 9076 . - . ID=gene-NND05_08220;Name=NND05_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08220 JANDXE010000015.1 Protein Homology CDS 8285 9076 . - 0 ID=cds-MCP9537544.1;Parent=gene-NND05_08220;Dbxref=NCBI_GP:MCP9537544.1;Name=MCP9537544.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849171.1;locus_tag=NND05_08220;product=Cof-type HAD-IIB family hydrolase;protein_id=MCP9537544.1;transl_table=11 JANDXE010000015.1 Genbank gene 9364 10296 . + . ID=gene-NND05_08225;Name=NND05_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08225 JANDXE010000015.1 Protein Homology CDS 9364 10296 . + 0 ID=cds-MCP9537545.1;Parent=gene-NND05_08225;Dbxref=NCBI_GP:MCP9537545.1;Name=MCP9537545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020418.2;locus_tag=NND05_08225;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9537545.1;transl_table=11 JANDXE010000015.1 Genbank gene 10425 11933 . + . ID=gene-NND05_08230;Name=NND05_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08230 JANDXE010000015.1 Protein Homology CDS 10425 11933 . + 0 ID=cds-MCP9537546.1;Parent=gene-NND05_08230;Dbxref=NCBI_GP:MCP9537546.1;Name=MCP9537546.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849169.1;locus_tag=NND05_08230;product=TolC family protein;protein_id=MCP9537546.1;transl_table=11 JANDXE010000015.1 Genbank gene 11974 12957 . + . ID=gene-NND05_08235;Name=NND05_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08235 JANDXE010000015.1 Protein Homology CDS 11974 12957 . + 0 ID=cds-MCP9537547.1;Parent=gene-NND05_08235;Dbxref=NCBI_GP:MCP9537547.1;Name=MCP9537547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565105.1;locus_tag=NND05_08235;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9537547.1;transl_table=11 JANDXE010000015.1 Genbank gene 12963 14126 . + . ID=gene-NND05_08240;Name=NND05_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08240 JANDXE010000015.1 Protein Homology CDS 12963 14126 . + 0 ID=cds-MCP9537548.1;Parent=gene-NND05_08240;Dbxref=NCBI_GP:MCP9537548.1;Name=MCP9537548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411607.1;locus_tag=NND05_08240;product=ABC transporter permease;protein_id=MCP9537548.1;transl_table=11 JANDXE010000015.1 Genbank gene 14196 15461 . + . ID=gene-NND05_08245;Name=NND05_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08245 JANDXE010000015.1 Protein Homology CDS 14196 15461 . + 0 ID=cds-MCP9537549.1;Parent=gene-NND05_08245;Dbxref=NCBI_GP:MCP9537549.1;Name=MCP9537549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849166.1;locus_tag=NND05_08245;product=ABC transporter permease;protein_id=MCP9537549.1;transl_table=11 JANDXE010000015.1 Genbank gene 15815 16915 . - . ID=gene-NND05_08250;Name=NND05_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08250 JANDXE010000015.1 Protein Homology CDS 15815 16915 . - 0 ID=cds-MCP9537550.1;Parent=gene-NND05_08250;Dbxref=NCBI_GP:MCP9537550.1;Name=MCP9537550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849165.1;locus_tag=NND05_08250;product=Mrp/NBP35 family ATP-binding protein;protein_id=MCP9537550.1;transl_table=11 JANDXE010000015.1 Genbank gene 17094 19220 . + . ID=gene-NND05_08255;Name=NND05_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08255 JANDXE010000015.1 Protein Homology CDS 17094 19220 . + 0 ID=cds-MCP9537551.1;Parent=gene-NND05_08255;Dbxref=NCBI_GP:MCP9537551.1;Name=MCP9537551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036499.2;locus_tag=NND05_08255;product=glycosyl hydrolase 115 family protein;protein_id=MCP9537551.1;transl_table=11 JANDXE010000015.1 Genbank gene 19395 20411 . - . ID=gene-NND05_08260;Name=NND05_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08260 JANDXE010000015.1 Protein Homology CDS 19395 20411 . - 0 ID=cds-MCP9537552.1;Parent=gene-NND05_08260;Dbxref=NCBI_GP:MCP9537552.1;Name=MCP9537552.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354183.1;locus_tag=NND05_08260;product=branched-chain amino acid aminotransferase;protein_id=MCP9537552.1;transl_table=11 JANDXE010000015.1 Genbank gene 20676 20870 . - . ID=gene-NND05_08265;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=NND05_08265 JANDXE010000015.1 Protein Homology CDS 20676 20870 . - 0 ID=cds-MCP9537553.1;Parent=gene-NND05_08265;Dbxref=NCBI_GP:MCP9537553.1;Name=MCP9537553.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019966734.1;locus_tag=NND05_08265;product=exodeoxyribonuclease VII small subunit;protein_id=MCP9537553.1;transl_table=11 JANDXE010000015.1 Genbank gene 21160 22461 . - . ID=gene-NND05_08270;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=NND05_08270 JANDXE010000015.1 Protein Homology CDS 21160 22461 . - 0 ID=cds-MCP9537554.1;Parent=gene-NND05_08270;Dbxref=NCBI_GP:MCP9537554.1;Name=MCP9537554.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004347031.1;locus_tag=NND05_08270;product=exodeoxyribonuclease VII large subunit;protein_id=MCP9537554.1;transl_table=11 JANDXE010000015.1 Genbank gene 22548 23975 . - . ID=gene-NND05_08275;Name=NND05_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08275 JANDXE010000015.1 Protein Homology CDS 22548 23975 . - 0 ID=cds-MCP9537555.1;Parent=gene-NND05_08275;Dbxref=NCBI_GP:MCP9537555.1;Name=MCP9537555.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847761.1;locus_tag=NND05_08275;product=S8 family serine peptidase;protein_id=MCP9537555.1;transl_table=11 JANDXE010000015.1 Genbank gene 24243 25616 . + . ID=gene-NND05_08280;Name=NND05_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08280 JANDXE010000015.1 Protein Homology CDS 24243 25616 . + 0 ID=cds-MCP9537556.1;Parent=gene-NND05_08280;Dbxref=NCBI_GP:MCP9537556.1;Name=MCP9537556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847763.1;locus_tag=NND05_08280;product=MATE family efflux transporter;protein_id=MCP9537556.1;transl_table=11 JANDXE010000015.1 Genbank gene 25650 26273 . + . ID=gene-NND05_08285;Name=NND05_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08285 JANDXE010000015.1 Protein Homology CDS 25650 26273 . + 0 ID=cds-MCP9537557.1;Parent=gene-NND05_08285;Dbxref=NCBI_GP:MCP9537557.1;Name=MCP9537557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004349810.1;locus_tag=NND05_08285;product=cytidylate kinase-like family protein;protein_id=MCP9537557.1;transl_table=11 JANDXE010000015.1 Genbank gene 26328 27509 . + . ID=gene-NND05_08290;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=NND05_08290 JANDXE010000015.1 Protein Homology CDS 26328 27509 . + 0 ID=cds-MCP9537558.1;Parent=gene-NND05_08290;Dbxref=NCBI_GP:MCP9537558.1;Name=MCP9537558.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010633.1;locus_tag=NND05_08290;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=MCP9537558.1;transl_table=11 JANDXE010000015.1 Genbank gene 27515 27928 . + . ID=gene-NND05_08295;Name=NND05_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08295 JANDXE010000015.1 Protein Homology CDS 27515 27928 . + 0 ID=cds-MCP9537559.1;Parent=gene-NND05_08295;Dbxref=NCBI_GP:MCP9537559.1;Name=MCP9537559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823122.1;locus_tag=NND05_08295;product=FdtA/QdtA family cupin domain-containing protein;protein_id=MCP9537559.1;transl_table=11 JANDXE010000015.1 Genbank gene 27952 28890 . + . ID=gene-NND05_08300;Name=NND05_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08300 JANDXE010000015.1 Protein Homology CDS 27952 28890 . + 0 ID=cds-MCP9537560.1;Parent=gene-NND05_08300;Dbxref=NCBI_GP:MCP9537560.1;Name=MCP9537560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005843729.1;locus_tag=NND05_08300;product=GNAT family N-acetyltransferase;protein_id=MCP9537560.1;transl_table=11 JANDXE010000015.1 Genbank gene 28940 29518 . - . ID=gene-NND05_08305;Name=NND05_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08305 JANDXE010000015.1 Protein Homology CDS 28940 29518 . - 0 ID=cds-MCP9537561.1;Parent=gene-NND05_08305;Dbxref=NCBI_GP:MCP9537561.1;Name=MCP9537561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411731.1;locus_tag=NND05_08305;product=LUD domain-containing protein;protein_id=MCP9537561.1;transl_table=11 JANDXE010000015.1 Genbank gene 29559 30932 . - . ID=gene-NND05_08310;Name=NND05_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08310 JANDXE010000015.1 Protein Homology CDS 29559 30932 . - 0 ID=cds-MCP9537562.1;Parent=gene-NND05_08310;Dbxref=NCBI_GP:MCP9537562.1;Name=MCP9537562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919554.1;locus_tag=NND05_08310;product=lactate utilization protein;protein_id=MCP9537562.1;transl_table=11 JANDXE010000015.1 Genbank gene 30929 31666 . - . ID=gene-NND05_08315;Name=NND05_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08315 JANDXE010000015.1 Protein Homology CDS 30929 31666 . - 0 ID=cds-MCP9537563.1;Parent=gene-NND05_08315;Dbxref=NCBI_GP:MCP9537563.1;Name=MCP9537563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371444.1;locus_tag=NND05_08315;product=(Fe-S)-binding protein;protein_id=MCP9537563.1;transl_table=11 JANDXE010000015.1 Genbank gene 31981 35211 . + . ID=gene-NND05_08320;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NND05_08320 JANDXE010000015.1 Protein Homology CDS 31981 35211 . + 0 ID=cds-MCP9537564.1;Parent=gene-NND05_08320;Dbxref=NCBI_GP:MCP9537564.1;Name=MCP9537564.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005814446.1;locus_tag=NND05_08320;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=MCP9537564.1;transl_table=11 JANDXE010000015.1 Genbank gene 35356 37563 . + . ID=gene-NND05_08325;Name=NND05_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08325 JANDXE010000015.1 Protein Homology CDS 35356 37563 . + 0 ID=cds-MCP9537565.1;Parent=gene-NND05_08325;Dbxref=NCBI_GP:MCP9537565.1;Name=MCP9537565.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847775.1;locus_tag=NND05_08325;product=DNA topoisomerase 3;protein_id=MCP9537565.1;transl_table=11 JANDXE010000015.1 Genbank gene 37847 39925 . + . ID=gene-NND05_08330;Name=NND05_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08330 JANDXE010000015.1 Protein Homology CDS 37847 39925 . + 0 ID=cds-MCP9537566.1;Parent=gene-NND05_08330;Dbxref=NCBI_GP:MCP9537566.1;Name=MCP9537566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282053.1;locus_tag=NND05_08330;product=OmpA family protein;protein_id=MCP9537566.1;transl_table=11 JANDXE010000015.1 Genbank gene 40173 40637 . - . ID=gene-NND05_08335;Name=NND05_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08335 JANDXE010000015.1 Protein Homology CDS 40173 40637 . - 0 ID=cds-MCP9537567.1;Parent=gene-NND05_08335;Dbxref=NCBI_GP:MCP9537567.1;Name=MCP9537567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027794.2;locus_tag=NND05_08335;product=DUF5056 domain-containing protein;protein_id=MCP9537567.1;transl_table=11 JANDXE010000015.1 Genbank gene 40627 41166 . - . ID=gene-NND05_08340;Name=NND05_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08340 JANDXE010000015.1 Protein Homology CDS 40627 41166 . - 0 ID=cds-MCP9537568.1;Parent=gene-NND05_08340;Dbxref=NCBI_GP:MCP9537568.1;Name=MCP9537568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847778.1;locus_tag=NND05_08340;product=RNA polymerase sigma factor;protein_id=MCP9537568.1;transl_table=11 JANDXE010000015.1 Genbank gene 41203 41922 . - . ID=gene-NND05_08345;Name=NND05_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08345 JANDXE010000015.1 Protein Homology CDS 41203 41922 . - 0 ID=cds-MCP9537569.1;Parent=gene-NND05_08345;Dbxref=NCBI_GP:MCP9537569.1;Name=MCP9537569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039701.1;locus_tag=NND05_08345;product=DUF6249 domain-containing protein;protein_id=MCP9537569.1;transl_table=11 JANDXE010000015.1 Genbank gene 42060 43487 . + . ID=gene-NND05_08350;Name=NND05_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08350 JANDXE010000015.1 Protein Homology CDS 42060 43487 . + 0 ID=cds-MCP9537570.1;Parent=gene-NND05_08350;Dbxref=NCBI_GP:MCP9537570.1;Name=MCP9537570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007902379.1;locus_tag=NND05_08350;product=hypothetical protein;protein_id=MCP9537570.1;transl_table=11 JANDXE010000015.1 Genbank gene 43543 44064 . + . ID=gene-NND05_08355;Name=NND05_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08355 JANDXE010000015.1 Protein Homology CDS 43543 44064 . + 0 ID=cds-MCP9537571.1;Parent=gene-NND05_08355;Dbxref=NCBI_GP:MCP9537571.1;Name=MCP9537571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006256429.1;locus_tag=NND05_08355;product=dihydrofolate reductase;protein_id=MCP9537571.1;transl_table=11 JANDXE010000015.1 Genbank gene 44092 44595 . - . ID=gene-NND05_08360;Name=NND05_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08360 JANDXE010000015.1 Protein Homology CDS 44092 44595 . - 0 ID=cds-MCP9537572.1;Parent=gene-NND05_08360;Dbxref=NCBI_GP:MCP9537572.1;Name=MCP9537572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847783.1;locus_tag=NND05_08360;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=MCP9537572.1;transl_table=11 JANDXE010000015.1 Genbank gene 44700 45164 . - . ID=gene-NND05_08365;Name=NND05_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08365 JANDXE010000015.1 Protein Homology CDS 44700 45164 . - 0 ID=cds-MCP9537573.1;Parent=gene-NND05_08365;Dbxref=NCBI_GP:MCP9537573.1;Name=MCP9537573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371457.1;locus_tag=NND05_08365;product=biopolymer transporter ExbD;protein_id=MCP9537573.1;transl_table=11 JANDXE010000015.1 Genbank gene 45161 45760 . - . ID=gene-NND05_08370;Name=NND05_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08370 JANDXE010000015.1 Protein Homology CDS 45161 45760 . - 0 ID=cds-MCP9537574.1;Parent=gene-NND05_08370;Dbxref=NCBI_GP:MCP9537574.1;Name=MCP9537574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847785.1;locus_tag=NND05_08370;product=biopolymer transporter ExbD;protein_id=MCP9537574.1;transl_table=11 JANDXE010000015.1 Genbank gene 45812 46333 . - . ID=gene-NND05_08375;Name=NND05_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08375 JANDXE010000015.1 Protein Homology CDS 45812 46333 . - 0 ID=cds-MCP9537575.1;Parent=gene-NND05_08375;Dbxref=NCBI_GP:MCP9537575.1;Name=MCP9537575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282058.1;locus_tag=NND05_08375;product=hypothetical protein;protein_id=MCP9537575.1;transl_table=11 JANDXE010000015.1 Genbank gene 46369 47082 . - . ID=gene-NND05_08380;Name=NND05_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08380 JANDXE010000015.1 Protein Homology CDS 46369 47082 . - 0 ID=cds-MCP9537576.1;Parent=gene-NND05_08380;Dbxref=NCBI_GP:MCP9537576.1;Name=MCP9537576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277177.1;locus_tag=NND05_08380;product=MotA/TolQ/ExbB proton channel family protein;protein_id=MCP9537576.1;transl_table=11 JANDXE010000015.1 Genbank gene 47116 47203 . - . ID=gene-NND05_08385;Name=NND05_08385;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08385 JANDXE010000015.1 tRNAscan-SE tRNA 47116 47203 . - . ID=rna-NND05_08385;Parent=gene-NND05_08385;anticodon=(pos:complement(47167..47169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08385;product=tRNA-Ser JANDXE010000015.1 tRNAscan-SE exon 47116 47203 . - . ID=exon-NND05_08385-1;Parent=rna-NND05_08385;anticodon=(pos:complement(47167..47169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08385;product=tRNA-Ser JANDXE010000015.1 Genbank gene 47465 49975 . - . ID=gene-NND05_08390;Name=NND05_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08390 JANDXE010000015.1 Protein Homology CDS 47465 49975 . - 0 ID=cds-MCP9537577.1;Parent=gene-NND05_08390;Dbxref=NCBI_GP:MCP9537577.1;Name=MCP9537577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318286.1;locus_tag=NND05_08390;product=beta-N-acetylglucosaminidase domain-containing protein;protein_id=MCP9537577.1;transl_table=11 JANDXE010000015.1 Genbank gene 50074 50901 . - . ID=gene-NND05_08395;Name=NND05_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08395 JANDXE010000015.1 Protein Homology CDS 50074 50901 . - 0 ID=cds-MCP9537578.1;Parent=gene-NND05_08395;Dbxref=NCBI_GP:MCP9537578.1;Name=MCP9537578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847788.1;locus_tag=NND05_08395;product=TatD family hydrolase;protein_id=MCP9537578.1;transl_table=11 JANDXE010000015.1 Genbank gene 50928 51902 . - . ID=gene-NND05_08400;Name=NND05_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08400 JANDXE010000015.1 Protein Homology CDS 50928 51902 . - 0 ID=cds-MCP9537579.1;Parent=gene-NND05_08400;Dbxref=NCBI_GP:MCP9537579.1;Name=MCP9537579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342414.1;locus_tag=NND05_08400;product=polyprenyl synthetase family protein;protein_id=MCP9537579.1;transl_table=11 JANDXE010000015.1 Genbank gene 51949 52686 . - . ID=gene-NND05_08405;Name=NND05_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08405 JANDXE010000015.1 Protein Homology CDS 51949 52686 . - 0 ID=cds-MCP9537580.1;Parent=gene-NND05_08405;Dbxref=NCBI_GP:MCP9537580.1;Name=MCP9537580.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847790.1;locus_tag=NND05_08405;product=TonB family protein;protein_id=MCP9537580.1;transl_table=11 JANDXE010000015.1 Genbank gene 52846 53793 . + . ID=gene-NND05_08410;Name=porQ;gbkey=Gene;gene=porQ;gene_biotype=protein_coding;locus_tag=NND05_08410 JANDXE010000015.1 Protein Homology CDS 52846 53793 . + 0 ID=cds-MCP9537581.1;Parent=gene-NND05_08410;Dbxref=NCBI_GP:MCP9537581.1;Name=MCP9537581.1;gbkey=CDS;gene=porQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412328.1;locus_tag=NND05_08410;product=type IX secretion system protein PorQ;protein_id=MCP9537581.1;transl_table=11 JANDXE010000015.1 Genbank gene 53851 54543 . + . ID=gene-NND05_08415;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=NND05_08415 JANDXE010000015.1 Protein Homology CDS 53851 54543 . + 0 ID=cds-MCP9537582.1;Parent=gene-NND05_08415;Dbxref=NCBI_GP:MCP9537582.1;Name=MCP9537582.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847792.1;locus_tag=NND05_08415;product=(d)CMP kinase;protein_id=MCP9537582.1;transl_table=11 JANDXE010000015.1 Genbank gene 54813 55691 . - . ID=gene-NND05_08420;Name=NND05_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08420 JANDXE010000015.1 Protein Homology CDS 54813 55691 . - 0 ID=cds-MCP9537583.1;Parent=gene-NND05_08420;Dbxref=NCBI_GP:MCP9537583.1;Name=MCP9537583.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344026.1;locus_tag=NND05_08420;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=MCP9537583.1;transl_table=11 JANDXE010000015.1 Genbank gene 55691 56755 . - . ID=gene-NND05_08425;Name=NND05_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08425 JANDXE010000015.1 Protein Homology CDS 55691 56755 . - 0 ID=cds-MCP9537584.1;Parent=gene-NND05_08425;Dbxref=NCBI_GP:MCP9537584.1;Name=MCP9537584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847794.1;locus_tag=NND05_08425;product=DUF1573 domain-containing protein;protein_id=MCP9537584.1;transl_table=11 JANDXE010000015.1 Genbank gene 56787 62243 . - . ID=gene-NND05_08430;Name=NND05_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08430 JANDXE010000015.1 Protein Homology CDS 56787 62243 . - 0 ID=cds-MCP9537585.1;Parent=gene-NND05_08430;Dbxref=NCBI_GP:MCP9537585.1;Name=MCP9537585.1;Ontology_term=GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;inference=COORDINATES: protein motif:HMM:NF036531.2;locus_tag=NND05_08430;product=MG2 domain-containing protein;protein_id=MCP9537585.1;transl_table=11 JANDXE010000015.1 Genbank gene 62403 64898 . + . ID=gene-NND05_08435;Name=NND05_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08435 JANDXE010000015.1 Protein Homology CDS 62403 64898 . + 0 ID=cds-MCP9537586.1;Parent=gene-NND05_08435;Dbxref=NCBI_GP:MCP9537586.1;Name=MCP9537586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006951838.1;locus_tag=NND05_08435;product=glycosyl transferase;protein_id=MCP9537586.1;transl_table=11 JANDXE010000015.1 Genbank gene 64919 65338 . + . ID=gene-NND05_08440;Name=NND05_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08440 JANDXE010000015.1 Protein Homology CDS 64919 65338 . + 0 ID=cds-MCP9537587.1;Parent=gene-NND05_08440;Dbxref=NCBI_GP:MCP9537587.1;Name=MCP9537587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847798.1;locus_tag=NND05_08440;product=hypothetical protein;protein_id=MCP9537587.1;transl_table=11 JANDXE010000015.1 Genbank gene 65460 66731 . - . ID=gene-NND05_08445;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=NND05_08445 JANDXE010000015.1 Protein Homology CDS 65460 66731 . - 0 ID=cds-MCP9537588.1;Parent=gene-NND05_08445;Dbxref=NCBI_GP:MCP9537588.1;Name=MCP9537588.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377351.1;locus_tag=NND05_08445;product=mannonate dehydratase;protein_id=MCP9537588.1;transl_table=11 JANDXE010000015.1 Genbank gene 66775 68364 . - . ID=gene-NND05_08450;Name=NND05_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08450 JANDXE010000015.1 Protein Homology CDS 66775 68364 . - 0 ID=cds-MCP9537589.1;Parent=gene-NND05_08450;Dbxref=NCBI_GP:MCP9537589.1;Name=MCP9537589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566214.1;locus_tag=NND05_08450;product=mannitol dehydrogenase family protein;protein_id=MCP9537589.1;transl_table=11 JANDXE010000015.1 Genbank gene 68533 69231 . - . ID=gene-NND05_08455;Name=NND05_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08455 JANDXE010000015.1 Protein Homology CDS 68533 69231 . - 0 ID=cds-MCP9537590.1;Parent=gene-NND05_08455;Dbxref=NCBI_GP:MCP9537590.1;Name=MCP9537590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008151239.1;locus_tag=NND05_08455;product=capsular biosynthesis protein;protein_id=MCP9537590.1;transl_table=11 JANDXE010000015.1 Genbank gene 69297 71753 . - . ID=gene-NND05_08460;Name=NND05_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08460 JANDXE010000015.1 Protein Homology CDS 69297 71753 . - 0 ID=cds-MCP9537591.1;Parent=gene-NND05_08460;Dbxref=NCBI_GP:MCP9537591.1;Name=MCP9537591.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019150227.1;locus_tag=NND05_08460;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=MCP9537591.1;transl_table=11 JANDXE010000015.1 Genbank gene 71814 72614 . - . ID=gene-NND05_08465;Name=NND05_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08465 JANDXE010000015.1 Protein Homology CDS 71814 72614 . - 0 ID=cds-MCP9537592.1;Parent=gene-NND05_08465;Dbxref=NCBI_GP:MCP9537592.1;Name=MCP9537592.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005790095.1;locus_tag=NND05_08465;product=polysaccharide biosynthesis/export family protein;protein_id=MCP9537592.1;transl_table=11 JANDXE010000015.1 Genbank gene 73122 74510 . + . ID=gene-NND05_08470;Name=NND05_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08470 JANDXE010000015.1 Protein Homology CDS 73122 74510 . + 0 ID=cds-MCP9537593.1;Parent=gene-NND05_08470;Dbxref=NCBI_GP:MCP9537593.1;Name=MCP9537593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346223.1;locus_tag=NND05_08470;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=MCP9537593.1;transl_table=11 JANDXE010000015.1 Genbank gene 74542 75855 . - . ID=gene-NND05_08475;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=NND05_08475 JANDXE010000015.1 Protein Homology CDS 74542 75855 . - 0 ID=cds-MCP9537594.1;Parent=gene-NND05_08475;Dbxref=NCBI_GP:MCP9537594.1;Name=MCP9537594.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237322.1;locus_tag=NND05_08475;product=DNA recombination protein RmuC;protein_id=MCP9537594.1;transl_table=11 JANDXE010000015.1 Genbank gene 76391 77677 . + . ID=gene-NND05_08480;Name=NND05_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08480 JANDXE010000015.1 Protein Homology CDS 76391 77677 . + 0 ID=cds-MCP9537595.1;Parent=gene-NND05_08480;Dbxref=NCBI_GP:MCP9537595.1;Name=MCP9537595.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847809.1;locus_tag=NND05_08480;product=M18 family aminopeptidase;protein_id=MCP9537595.1;transl_table=11 JANDXE010000015.1 Genbank gene 77856 79607 . - . ID=gene-NND05_08485;Name=NND05_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08485 JANDXE010000015.1 Protein Homology CDS 77856 79607 . - 0 ID=cds-MCP9537596.1;Parent=gene-NND05_08485;Dbxref=NCBI_GP:MCP9537596.1;Name=MCP9537596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641955.1;locus_tag=NND05_08485;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537596.1;transl_table=11 JANDXE010000015.1 Genbank gene 79662 82316 . - . ID=gene-NND05_08490;Name=NND05_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08490 JANDXE010000015.1 Protein Homology CDS 79662 82316 . - 0 ID=cds-MCP9537597.1;Parent=gene-NND05_08490;Dbxref=NCBI_GP:MCP9537597.1;Name=MCP9537597.1;Ontology_term=GO:0071702,GO:0022857,GO:0045203;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=organic substance transport|0071702||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846398.1;locus_tag=NND05_08490;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=MCP9537597.1;transl_table=11 JANDXE010000015.1 Genbank gene 82636 84057 . - . ID=gene-NND05_08495;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NND05_08495 JANDXE010000015.1 Protein Homology CDS 82636 84057 . - 0 ID=cds-MCP9537598.1;Parent=gene-NND05_08495;Dbxref=NCBI_GP:MCP9537598.1;Name=MCP9537598.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342869.1;locus_tag=NND05_08495;product=chromosomal replication initiator protein DnaA;protein_id=MCP9537598.1;transl_table=11 JANDXE010000015.1 Genbank gene 84409 85308 . - . ID=gene-NND05_08500;Name=NND05_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08500 JANDXE010000015.1 Protein Homology CDS 84409 85308 . - 0 ID=cds-MCP9537599.1;Parent=gene-NND05_08500;Dbxref=NCBI_GP:MCP9537599.1;Name=MCP9537599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343933.1;locus_tag=NND05_08500;product=MlaD family protein;protein_id=MCP9537599.1;transl_table=11 JANDXE010000015.1 Genbank gene 85381 86622 . - . ID=gene-NND05_08505;Name=NND05_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08505 JANDXE010000015.1 Protein Homology CDS 85381 86622 . - 0 ID=cds-MCP9537600.1;Parent=gene-NND05_08505;Dbxref=NCBI_GP:MCP9537600.1;Name=MCP9537600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343934.1;locus_tag=NND05_08505;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9537600.1;transl_table=11 JANDXE010000015.1 Genbank gene 86674 87057 . - . ID=gene-NND05_08510;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=NND05_08510 JANDXE010000015.1 Protein Homology CDS 86674 87057 . - 0 ID=cds-MCP9537601.1;Parent=gene-NND05_08510;Dbxref=NCBI_GP:MCP9537601.1;Name=MCP9537601.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343935.1;locus_tag=NND05_08510;product=dihydroneopterin aldolase;protein_id=MCP9537601.1;transl_table=11 JANDXE010000015.1 Genbank pseudogene 87116 87556 . - . ID=gene-NND05_08515;Name=NND05_08515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_08515;pseudo=true JANDXE010000015.1 Protein Homology CDS 87116 87556 . - 0 ID=cds-NND05_08515;Parent=gene-NND05_08515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377226.1;locus_tag=NND05_08515;product=ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent;pseudo=true;transl_table=11 JANDXE010000015.1 Genbank gene 87918 88655 . + . ID=gene-NND05_08520;Name=NND05_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08520 JANDXE010000015.1 Protein Homology CDS 87918 88655 . + 0 ID=cds-MCP9537602.1;Parent=gene-NND05_08520;Dbxref=NCBI_GP:MCP9537602.1;Name=MCP9537602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434531.1;locus_tag=NND05_08520;product=nitroreductase family protein;protein_id=MCP9537602.1;transl_table=11 JANDXE010000015.1 Genbank gene 88847 89299 . - . ID=gene-NND05_08525;Name=NND05_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08525 JANDXE010000015.1 Protein Homology CDS 88847 89299 . - 0 ID=cds-MCP9537603.1;Parent=gene-NND05_08525;Dbxref=NCBI_GP:MCP9537603.1;Name=MCP9537603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040141.1;locus_tag=NND05_08525;product=DUF5675 family protein;protein_id=MCP9537603.1;transl_table=11 JANDXE010000015.1 Genbank gene 89565 89819 . - . ID=gene-NND05_08530;Name=NND05_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08530 JANDXE010000015.1 Protein Homology CDS 89565 89819 . - 0 ID=cds-MCP9537604.1;Parent=gene-NND05_08530;Dbxref=NCBI_GP:MCP9537604.1;Name=MCP9537604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_08530;product=DUF4248 domain-containing protein;protein_id=MCP9537604.1;transl_table=11 JANDXE010000015.1 Genbank gene 89903 90343 . - . ID=gene-NND05_08535;Name=NND05_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08535 JANDXE010000015.1 Protein Homology CDS 89903 90343 . - 0 ID=cds-MCP9537605.1;Parent=gene-NND05_08535;Dbxref=NCBI_GP:MCP9537605.1;Name=MCP9537605.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846248.1;locus_tag=NND05_08535;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9537605.1;transl_table=11 JANDXE010000015.1 Genbank gene 91148 91609 . + . ID=gene-NND05_08540;Name=NND05_08540;end_range=91609,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08540;partial=true JANDXE010000015.1 GeneMarkS-2+ CDS 91148 91609 . + 0 ID=cds-MCP9537606.1;Parent=gene-NND05_08540;Dbxref=NCBI_GP:MCP9537606.1;Name=MCP9537606.1;end_range=91609,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08540;partial=true;product=hypothetical protein;protein_id=MCP9537606.1;transl_table=11 ##sequence-region JANDXE010000016.1 1 88911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000016.1 Genbank region 1 88911 . + . ID=JANDXE010000016.1:1..88911;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000016.1 Genbank gene 21 133 . + . ID=gene-NND05_08545;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_08545 JANDXE010000016.1 cmsearch rRNA 21 133 . + . ID=rna-NND05_08545;Parent=gene-NND05_08545;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_08545;product=5S ribosomal RNA JANDXE010000016.1 cmsearch exon 21 133 . + . ID=exon-NND05_08545-1;Parent=rna-NND05_08545;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_08545;product=5S ribosomal RNA JANDXE010000016.1 Genbank gene 336 707 . - . ID=gene-NND05_08550;Name=NND05_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08550 JANDXE010000016.1 Protein Homology CDS 336 707 . - 0 ID=cds-MCP9537607.1;Parent=gene-NND05_08550;Dbxref=NCBI_GP:MCP9537607.1;Name=MCP9537607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370385.1;locus_tag=NND05_08550;product=hypothetical protein;protein_id=MCP9537607.1;transl_table=11 JANDXE010000016.1 Genbank gene 893 2554 . + . ID=gene-NND05_08555;Name=NND05_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08555 JANDXE010000016.1 Protein Homology CDS 893 2554 . + 0 ID=cds-MCP9537608.1;Parent=gene-NND05_08555;Dbxref=NCBI_GP:MCP9537608.1;Name=MCP9537608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849496.1;locus_tag=NND05_08555;product=glycogen/starch synthase;protein_id=MCP9537608.1;transl_table=11 JANDXE010000016.1 Genbank gene 2632 5190 . + . ID=gene-NND05_08560;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=NND05_08560 JANDXE010000016.1 Protein Homology CDS 2632 5190 . + 0 ID=cds-MCP9537609.1;Parent=gene-NND05_08560;Dbxref=NCBI_GP:MCP9537609.1;Name=MCP9537609.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378569.1;locus_tag=NND05_08560;product=alpha-glucan family phosphorylase;protein_id=MCP9537609.1;transl_table=11 JANDXE010000016.1 Genbank gene 5421 6359 . - . ID=gene-NND05_08565;Name=NND05_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08565 JANDXE010000016.1 Protein Homology CDS 5421 6359 . - 0 ID=cds-MCP9537610.1;Parent=gene-NND05_08565;Dbxref=NCBI_GP:MCP9537610.1;Name=MCP9537610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227755.1;locus_tag=NND05_08565;product=ribose-phosphate pyrophosphokinase;protein_id=MCP9537610.1;transl_table=11 JANDXE010000016.1 Genbank gene 6437 7045 . - . ID=gene-NND05_08570;Name=NND05_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08570 JANDXE010000016.1 Protein Homology CDS 6437 7045 . - 0 ID=cds-MCP9537611.1;Parent=gene-NND05_08570;Dbxref=NCBI_GP:MCP9537611.1;Name=MCP9537611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849493.1;locus_tag=NND05_08570;product=thiamine phosphate synthase;protein_id=MCP9537611.1;transl_table=11 JANDXE010000016.1 Genbank gene 7153 8328 . + . ID=gene-NND05_08575;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=NND05_08575 JANDXE010000016.1 Protein Homology CDS 7153 8328 . + 0 ID=cds-MCP9537612.1;Parent=gene-NND05_08575;Dbxref=NCBI_GP:MCP9537612.1;Name=MCP9537612.1;Ontology_term=GO:0008216,GO:0016831;gbkey=CDS;gene=nspC;go_function=carboxy-lyase activity|0016831||IEA;go_process=spermidine metabolic process|0008216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910043.1;locus_tag=NND05_08575;product=carboxynorspermidine decarboxylase;protein_id=MCP9537612.1;transl_table=11 JANDXE010000016.1 Genbank gene 8531 8603 . + . ID=gene-NND05_08580;Name=NND05_08580;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08580 JANDXE010000016.1 tRNAscan-SE tRNA 8531 8603 . + . ID=rna-NND05_08580;Parent=gene-NND05_08580;anticodon=(pos:8564..8566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08580;product=tRNA-Gly JANDXE010000016.1 tRNAscan-SE exon 8531 8603 . + . ID=exon-NND05_08580-1;Parent=rna-NND05_08580;anticodon=(pos:8564..8566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08580;product=tRNA-Gly JANDXE010000016.1 Genbank gene 8658 8741 . + . ID=gene-NND05_08585;Name=NND05_08585;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08585 JANDXE010000016.1 tRNAscan-SE tRNA 8658 8741 . + . ID=rna-NND05_08585;Parent=gene-NND05_08585;anticodon=(pos:8692..8694);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08585;product=tRNA-Leu JANDXE010000016.1 tRNAscan-SE exon 8658 8741 . + . ID=exon-NND05_08585-1;Parent=rna-NND05_08585;anticodon=(pos:8692..8694);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08585;product=tRNA-Leu JANDXE010000016.1 Genbank gene 8760 8835 . + . ID=gene-NND05_08590;Name=NND05_08590;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08590 JANDXE010000016.1 tRNAscan-SE tRNA 8760 8835 . + . ID=rna-NND05_08590;Parent=gene-NND05_08590;anticodon=(pos:8793..8795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08590;product=tRNA-Gly JANDXE010000016.1 tRNAscan-SE exon 8760 8835 . + . ID=exon-NND05_08590-1;Parent=rna-NND05_08590;anticodon=(pos:8793..8795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08590;product=tRNA-Gly JANDXE010000016.1 Genbank gene 8875 8956 . + . ID=gene-NND05_08595;Name=NND05_08595;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08595 JANDXE010000016.1 tRNAscan-SE tRNA 8875 8956 . + . ID=rna-NND05_08595;Parent=gene-NND05_08595;anticodon=(pos:8909..8911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08595;product=tRNA-Leu JANDXE010000016.1 tRNAscan-SE exon 8875 8956 . + . ID=exon-NND05_08595-1;Parent=rna-NND05_08595;anticodon=(pos:8909..8911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08595;product=tRNA-Leu JANDXE010000016.1 Genbank gene 8985 9071 . + . ID=gene-NND05_08600;Name=NND05_08600;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08600 JANDXE010000016.1 tRNAscan-SE tRNA 8985 9071 . + . ID=rna-NND05_08600;Parent=gene-NND05_08600;anticodon=(pos:9019..9021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08600;product=tRNA-Leu JANDXE010000016.1 tRNAscan-SE exon 8985 9071 . + . ID=exon-NND05_08600-1;Parent=rna-NND05_08600;anticodon=(pos:9019..9021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08600;product=tRNA-Leu JANDXE010000016.1 Genbank gene 9091 9163 . + . ID=gene-NND05_08605;Name=NND05_08605;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08605 JANDXE010000016.1 tRNAscan-SE tRNA 9091 9163 . + . ID=rna-NND05_08605;Parent=gene-NND05_08605;anticodon=(pos:9124..9126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08605;product=tRNA-Gly JANDXE010000016.1 tRNAscan-SE exon 9091 9163 . + . ID=exon-NND05_08605-1;Parent=rna-NND05_08605;anticodon=(pos:9124..9126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08605;product=tRNA-Gly JANDXE010000016.1 Genbank gene 9198 9734 . + . ID=gene-NND05_08610;Name=NND05_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08610 JANDXE010000016.1 Protein Homology CDS 9198 9734 . + 0 ID=cds-MCP9537613.1;Parent=gene-NND05_08610;Dbxref=NCBI_GP:MCP9537613.1;Name=MCP9537613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822318.1;locus_tag=NND05_08610;product=hypothetical protein;protein_id=MCP9537613.1;transl_table=11 JANDXE010000016.1 Genbank gene 9756 10178 . + . ID=gene-NND05_08615;Name=NND05_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08615 JANDXE010000016.1 Protein Homology CDS 9756 10178 . + 0 ID=cds-MCP9537614.1;Parent=gene-NND05_08615;Dbxref=NCBI_GP:MCP9537614.1;Name=MCP9537614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967311.1;locus_tag=NND05_08615;product=single-stranded DNA-binding protein;protein_id=MCP9537614.1;transl_table=11 JANDXE010000016.1 Genbank gene 10195 11541 . + . ID=gene-NND05_08620;Name=gldE;gbkey=Gene;gene=gldE;gene_biotype=protein_coding;locus_tag=NND05_08620 JANDXE010000016.1 Protein Homology CDS 10195 11541 . + 0 ID=cds-MCP9537615.1;Parent=gene-NND05_08620;Dbxref=NCBI_GP:MCP9537615.1;Name=MCP9537615.1;Ontology_term=GO:0050660;gbkey=CDS;gene=gldE;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008123174.1;locus_tag=NND05_08620;product=gliding motility-associated protein GldE;protein_id=MCP9537615.1;transl_table=11 JANDXE010000016.1 Genbank gene 11581 12216 . + . ID=gene-NND05_08625;Name=NND05_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08625 JANDXE010000016.1 Protein Homology CDS 11581 12216 . + 0 ID=cds-MCP9537616.1;Parent=gene-NND05_08625;Dbxref=NCBI_GP:MCP9537616.1;Name=MCP9537616.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849488.1;locus_tag=NND05_08625;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=MCP9537616.1;transl_table=11 JANDXE010000016.1 Genbank gene 12203 13294 . + . ID=gene-NND05_08630;Name=NND05_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08630 JANDXE010000016.1 Protein Homology CDS 12203 13294 . + 0 ID=cds-MCP9537617.1;Parent=gene-NND05_08630;Dbxref=NCBI_GP:MCP9537617.1;Name=MCP9537617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024841.2;locus_tag=NND05_08630;product=esterase-like activity of phytase family protein;protein_id=MCP9537617.1;transl_table=11 JANDXE010000016.1 Genbank gene 13300 14094 . - . ID=gene-NND05_08635;Name=NND05_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08635 JANDXE010000016.1 Protein Homology CDS 13300 14094 . - 0 ID=cds-MCP9537618.1;Parent=gene-NND05_08635;Dbxref=NCBI_GP:MCP9537618.1;Name=MCP9537618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849486.1;locus_tag=NND05_08635;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MCP9537618.1;transl_table=11 JANDXE010000016.1 Genbank gene 14196 15041 . - . ID=gene-NND05_08640;Name=NND05_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08640 JANDXE010000016.1 Protein Homology CDS 14196 15041 . - 0 ID=cds-MCP9537619.1;Parent=gene-NND05_08640;Dbxref=NCBI_GP:MCP9537619.1;Name=MCP9537619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849485.1;locus_tag=NND05_08640;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=MCP9537619.1;transl_table=11 JANDXE010000016.1 Genbank gene 15123 15728 . - . ID=gene-NND05_08645;Name=NND05_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08645 JANDXE010000016.1 Protein Homology CDS 15123 15728 . - 0 ID=cds-MCP9537620.1;Parent=gene-NND05_08645;Dbxref=NCBI_GP:MCP9537620.1;Name=MCP9537620.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_08645;product=HU family DNA-binding protein;protein_id=MCP9537620.1;transl_table=11 JANDXE010000016.1 Genbank gene 16101 16412 . - . ID=gene-NND05_08650;Name=NND05_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08650 JANDXE010000016.1 Protein Homology CDS 16101 16412 . - 0 ID=cds-MCP9537621.1;Parent=gene-NND05_08650;Dbxref=NCBI_GP:MCP9537621.1;Name=MCP9537621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849329.1;locus_tag=NND05_08650;product=nucleotidyltransferase domain-containing protein;protein_id=MCP9537621.1;transl_table=11 JANDXE010000016.1 Genbank gene 17050 19602 . + . ID=gene-NND05_08655;Name=NND05_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08655 JANDXE010000016.1 Protein Homology CDS 17050 19602 . + 0 ID=cds-MCP9537622.1;Parent=gene-NND05_08655;Dbxref=NCBI_GP:MCP9537622.1;Name=MCP9537622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849526.1;locus_tag=NND05_08655;product=TonB-dependent receptor;protein_id=MCP9537622.1;transl_table=11 JANDXE010000016.1 Genbank gene 20107 20865 . + . ID=gene-NND05_08660;Name=NND05_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08660 JANDXE010000016.1 Protein Homology CDS 20107 20865 . + 0 ID=cds-MCP9537623.1;Parent=gene-NND05_08660;Dbxref=NCBI_GP:MCP9537623.1;Name=MCP9537623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=NND05_08660;product=helix-turn-helix transcriptional regulator;protein_id=MCP9537623.1;transl_table=11 JANDXE010000016.1 Genbank gene 20872 21465 . - . ID=gene-NND05_08665;Name=NND05_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08665 JANDXE010000016.1 GeneMarkS-2+ CDS 20872 21465 . - 0 ID=cds-MCP9537624.1;Parent=gene-NND05_08665;Dbxref=NCBI_GP:MCP9537624.1;Name=MCP9537624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08665;product=hypothetical protein;protein_id=MCP9537624.1;transl_table=11 JANDXE010000016.1 Genbank gene 21516 23843 . - . ID=gene-NND05_08670;Name=NND05_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08670 JANDXE010000016.1 Protein Homology CDS 21516 23843 . - 0 ID=cds-MCP9537625.1;Parent=gene-NND05_08670;Dbxref=NCBI_GP:MCP9537625.1;Name=MCP9537625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007902612.1;locus_tag=NND05_08670;product=outer membrane beta-barrel protein;protein_id=MCP9537625.1;transl_table=11 JANDXE010000016.1 Genbank gene 24056 24613 . - . ID=gene-NND05_08675;Name=NND05_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08675 JANDXE010000016.1 GeneMarkS-2+ CDS 24056 24613 . - 0 ID=cds-MCP9537626.1;Parent=gene-NND05_08675;Dbxref=NCBI_GP:MCP9537626.1;Name=MCP9537626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08675;product=hypothetical protein;protein_id=MCP9537626.1;transl_table=11 JANDXE010000016.1 Genbank gene 24704 25477 . - . ID=gene-NND05_08680;Name=NND05_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08680 JANDXE010000016.1 Protein Homology CDS 24704 25477 . - 0 ID=cds-MCP9537627.1;Parent=gene-NND05_08680;Dbxref=NCBI_GP:MCP9537627.1;Name=MCP9537627.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384574.1;locus_tag=NND05_08680;product=winged helix-turn-helix domain-containing protein;protein_id=MCP9537627.1;transl_table=11 JANDXE010000016.1 Genbank gene 25681 27777 . + . ID=gene-NND05_08685;Name=NND05_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08685 JANDXE010000016.1 GeneMarkS-2+ CDS 25681 27777 . + 0 ID=cds-MCP9537628.1;Parent=gene-NND05_08685;Dbxref=NCBI_GP:MCP9537628.1;Name=MCP9537628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08685;product=hypothetical protein;protein_id=MCP9537628.1;transl_table=11 JANDXE010000016.1 Genbank gene 27822 28760 . - . ID=gene-NND05_08690;Name=NND05_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08690 JANDXE010000016.1 Protein Homology CDS 27822 28760 . - 0 ID=cds-MCP9537629.1;Parent=gene-NND05_08690;Dbxref=NCBI_GP:MCP9537629.1;Name=MCP9537629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968550.1;locus_tag=NND05_08690;product=DMT family transporter;protein_id=MCP9537629.1;transl_table=11 JANDXE010000016.1 Genbank gene 28789 30375 . - . ID=gene-NND05_08695;Name=NND05_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08695 JANDXE010000016.1 Protein Homology CDS 28789 30375 . - 0 ID=cds-MCP9537630.1;Parent=gene-NND05_08695;Dbxref=NCBI_GP:MCP9537630.1;Name=MCP9537630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848530.1;locus_tag=NND05_08695;product=ATP-binding protein;protein_id=MCP9537630.1;transl_table=11 JANDXE010000016.1 Genbank gene 30579 31070 . + . ID=gene-NND05_08700;Name=NND05_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08700 JANDXE010000016.1 Protein Homology CDS 30579 31070 . + 0 ID=cds-MCP9537631.1;Parent=gene-NND05_08700;Dbxref=NCBI_GP:MCP9537631.1;Name=MCP9537631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=NND05_08700;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537631.1;transl_table=11 JANDXE010000016.1 Genbank gene 31067 31678 . + . ID=gene-NND05_08705;Name=NND05_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08705 JANDXE010000016.1 GeneMarkS-2+ CDS 31067 31678 . + 0 ID=cds-MCP9537632.1;Parent=gene-NND05_08705;Dbxref=NCBI_GP:MCP9537632.1;Name=MCP9537632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08705;product=hypothetical protein;protein_id=MCP9537632.1;transl_table=11 JANDXE010000016.1 Genbank gene 31730 34324 . + . ID=gene-NND05_08710;Name=NND05_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08710 JANDXE010000016.1 Protein Homology CDS 31730 34324 . + 0 ID=cds-MCP9537633.1;Parent=gene-NND05_08710;Dbxref=NCBI_GP:MCP9537633.1;Name=MCP9537633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_08710;product=TonB-dependent receptor;protein_id=MCP9537633.1;transl_table=11 JANDXE010000016.1 Genbank gene 34402 35223 . - . ID=gene-NND05_08715;Name=NND05_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08715 JANDXE010000016.1 Protein Homology CDS 34402 35223 . - 0 ID=cds-MCP9537634.1;Parent=gene-NND05_08715;Dbxref=NCBI_GP:MCP9537634.1;Name=MCP9537634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849324.1;locus_tag=NND05_08715;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MCP9537634.1;transl_table=11 JANDXE010000016.1 Genbank gene 35269 36036 . - . ID=gene-NND05_08720;Name=NND05_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08720 JANDXE010000016.1 Protein Homology CDS 35269 36036 . - 0 ID=cds-MCP9537635.1;Parent=gene-NND05_08720;Dbxref=NCBI_GP:MCP9537635.1;Name=MCP9537635.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360503.1;locus_tag=NND05_08720;product=radical SAM protein;protein_id=MCP9537635.1;transl_table=11 JANDXE010000016.1 Genbank gene 36340 36819 . + . ID=gene-NND05_08725;Name=NND05_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08725 JANDXE010000016.1 Protein Homology CDS 36340 36819 . + 0 ID=cds-MCP9537636.1;Parent=gene-NND05_08725;Dbxref=NCBI_GP:MCP9537636.1;Name=MCP9537636.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849322.1;locus_tag=NND05_08725;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537636.1;transl_table=11 JANDXE010000016.1 Genbank gene 36837 37523 . + . ID=gene-NND05_08730;Name=NND05_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08730 JANDXE010000016.1 Protein Homology CDS 36837 37523 . + 0 ID=cds-MCP9537637.1;Parent=gene-NND05_08730;Dbxref=NCBI_GP:MCP9537637.1;Name=MCP9537637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849321.1;locus_tag=NND05_08730;product=DUF4974 domain-containing protein;protein_id=MCP9537637.1;transl_table=11 JANDXE010000016.1 Genbank gene 37541 40129 . + . ID=gene-NND05_08735;Name=NND05_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08735 JANDXE010000016.1 Protein Homology CDS 37541 40129 . + 0 ID=cds-MCP9537638.1;Parent=gene-NND05_08735;Dbxref=NCBI_GP:MCP9537638.1;Name=MCP9537638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_08735;product=outer membrane beta-barrel protein;protein_id=MCP9537638.1;transl_table=11 JANDXE010000016.1 Genbank gene 40742 43045 . + . ID=gene-NND05_08740;Name=NND05_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08740 JANDXE010000016.1 Protein Homology CDS 40742 43045 . + 0 ID=cds-MCP9537639.1;Parent=gene-NND05_08740;Dbxref=NCBI_GP:MCP9537639.1;Name=MCP9537639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_08740;product=TonB-dependent receptor;protein_id=MCP9537639.1;transl_table=11 JANDXE010000016.1 Genbank gene 43232 43525 . - . ID=gene-NND05_08745;Name=NND05_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08745 JANDXE010000016.1 Protein Homology CDS 43232 43525 . - 0 ID=cds-MCP9537640.1;Parent=gene-NND05_08745;Dbxref=NCBI_GP:MCP9537640.1;Name=MCP9537640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547513.1;locus_tag=NND05_08745;product=nucleotidyltransferase family protein;protein_id=MCP9537640.1;transl_table=11 JANDXE010000016.1 Genbank gene 43743 44231 . + . ID=gene-NND05_08750;Name=NND05_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08750 JANDXE010000016.1 Protein Homology CDS 43743 44231 . + 0 ID=cds-MCP9537641.1;Parent=gene-NND05_08750;Dbxref=NCBI_GP:MCP9537641.1;Name=MCP9537641.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368029.1;locus_tag=NND05_08750;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537641.1;transl_table=11 JANDXE010000016.1 Genbank gene 44348 45127 . + . ID=gene-NND05_08755;Name=NND05_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08755 JANDXE010000016.1 GeneMarkS-2+ CDS 44348 45127 . + 0 ID=cds-MCP9537642.1;Parent=gene-NND05_08755;Dbxref=NCBI_GP:MCP9537642.1;Name=MCP9537642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08755;product=DUF4974 domain-containing protein;protein_id=MCP9537642.1;transl_table=11 JANDXE010000016.1 Genbank gene 45129 47699 . + . ID=gene-NND05_08760;Name=NND05_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08760 JANDXE010000016.1 Protein Homology CDS 45129 47699 . + 0 ID=cds-MCP9537643.1;Parent=gene-NND05_08760;Dbxref=NCBI_GP:MCP9537643.1;Name=MCP9537643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_08760;product=TonB-dependent receptor;protein_id=MCP9537643.1;transl_table=11 JANDXE010000016.1 Genbank gene 48141 50186 . + . ID=gene-NND05_08765;Name=NND05_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08765 JANDXE010000016.1 GeneMarkS-2+ CDS 48141 50186 . + 0 ID=cds-MCP9537644.1;Parent=gene-NND05_08765;Dbxref=NCBI_GP:MCP9537644.1;Name=MCP9537644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08765;product=hypothetical protein;protein_id=MCP9537644.1;transl_table=11 JANDXE010000016.1 Genbank gene 50217 52337 . + . ID=gene-NND05_08770;Name=NND05_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08770 JANDXE010000016.1 Protein Homology CDS 50217 52337 . + 0 ID=cds-MCP9537645.1;Parent=gene-NND05_08770;Dbxref=NCBI_GP:MCP9537645.1;Name=MCP9537645.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NND05_08770;product=outer membrane beta-barrel family protein;protein_id=MCP9537645.1;transl_table=11 JANDXE010000016.1 Genbank gene 52665 53654 . + . ID=gene-NND05_08775;Name=NND05_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08775 JANDXE010000016.1 Protein Homology CDS 52665 53654 . + 0 ID=cds-MCP9537646.1;Parent=gene-NND05_08775;Dbxref=NCBI_GP:MCP9537646.1;Name=MCP9537646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849303.1;locus_tag=NND05_08775;product=alpha/beta hydrolase;protein_id=MCP9537646.1;transl_table=11 JANDXE010000016.1 Genbank gene 53656 54942 . - . ID=gene-NND05_08780;Name=NND05_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08780 JANDXE010000016.1 Protein Homology CDS 53656 54942 . - 0 ID=cds-MCP9537647.1;Parent=gene-NND05_08780;Dbxref=NCBI_GP:MCP9537647.1;Name=MCP9537647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901739.1;locus_tag=NND05_08780;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCP9537647.1;transl_table=11 JANDXE010000016.1 Genbank gene 55085 55483 . + . ID=gene-NND05_08785;Name=NND05_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08785 JANDXE010000016.1 Protein Homology CDS 55085 55483 . + 0 ID=cds-MCP9537648.1;Parent=gene-NND05_08785;Dbxref=NCBI_GP:MCP9537648.1;Name=MCP9537648.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849301.1;locus_tag=NND05_08785;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9537648.1;transl_table=11 JANDXE010000016.1 Genbank gene 55535 57724 . - . ID=gene-NND05_08790;Name=NND05_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08790 JANDXE010000016.1 Protein Homology CDS 55535 57724 . - 0 ID=cds-MCP9537649.1;Parent=gene-NND05_08790;Dbxref=NCBI_GP:MCP9537649.1;Name=MCP9537649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_08790;product=outer membrane beta-barrel protein;protein_id=MCP9537649.1;transl_table=11 JANDXE010000016.1 Genbank gene 57886 59304 . + . ID=gene-NND05_08795;Name=NND05_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08795 JANDXE010000016.1 Protein Homology CDS 57886 59304 . + 0 ID=cds-MCP9537650.1;Parent=gene-NND05_08795;Dbxref=NCBI_GP:MCP9537650.1;Name=MCP9537650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_08795;product=HAMP domain-containing histidine kinase;protein_id=MCP9537650.1;transl_table=11 JANDXE010000016.1 Genbank gene 59339 60025 . + . ID=gene-NND05_08800;Name=NND05_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08800 JANDXE010000016.1 Protein Homology CDS 59339 60025 . + 0 ID=cds-MCP9537651.1;Parent=gene-NND05_08800;Dbxref=NCBI_GP:MCP9537651.1;Name=MCP9537651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005936718.1;locus_tag=NND05_08800;product=response regulator transcription factor;protein_id=MCP9537651.1;transl_table=11 JANDXE010000016.1 Genbank gene 60009 60431 . - . ID=gene-NND05_08805;Name=NND05_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08805 JANDXE010000016.1 GeneMarkS-2+ CDS 60009 60431 . - 0 ID=cds-MCP9537652.1;Parent=gene-NND05_08805;Dbxref=NCBI_GP:MCP9537652.1;Name=MCP9537652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08805;product=hypothetical protein;protein_id=MCP9537652.1;transl_table=11 JANDXE010000016.1 Genbank gene 60446 61339 . - . ID=gene-NND05_08810;Name=NND05_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08810 JANDXE010000016.1 GeneMarkS-2+ CDS 60446 61339 . - 0 ID=cds-MCP9537653.1;Parent=gene-NND05_08810;Dbxref=NCBI_GP:MCP9537653.1;Name=MCP9537653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08810;product=hypothetical protein;protein_id=MCP9537653.1;transl_table=11 JANDXE010000016.1 Genbank gene 61358 61864 . - . ID=gene-NND05_08815;Name=NND05_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08815 JANDXE010000016.1 Protein Homology CDS 61358 61864 . - 0 ID=cds-MCP9537654.1;Parent=gene-NND05_08815;Dbxref=NCBI_GP:MCP9537654.1;Name=MCP9537654.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=NND05_08815;product=RNA polymerase sigma factor;protein_id=MCP9537654.1;transl_table=11 JANDXE010000016.1 Genbank gene 62215 63276 . + . ID=gene-NND05_08820;Name=NND05_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08820 JANDXE010000016.1 Protein Homology CDS 62215 63276 . + 0 ID=cds-MCP9537655.1;Parent=gene-NND05_08820;Dbxref=NCBI_GP:MCP9537655.1;Name=MCP9537655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849293.1;locus_tag=NND05_08820;product=OprO/OprP family phosphate-selective porin;protein_id=MCP9537655.1;transl_table=11 JANDXE010000016.1 Genbank gene 63645 64721 . - . ID=gene-NND05_08825;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=NND05_08825 JANDXE010000016.1 Protein Homology CDS 63645 64721 . - 0 ID=cds-MCP9537656.1;Parent=gene-NND05_08825;Dbxref=NCBI_GP:MCP9537656.1;Name=MCP9537656.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411996.1;locus_tag=NND05_08825;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=MCP9537656.1;transl_table=11 JANDXE010000016.1 Genbank gene 64753 65463 . - . ID=gene-NND05_08830;Name=NND05_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08830 JANDXE010000016.1 GeneMarkS-2+ CDS 64753 65463 . - 0 ID=cds-MCP9537657.1;Parent=gene-NND05_08830;Dbxref=NCBI_GP:MCP9537657.1;Name=MCP9537657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08830;product=hypothetical protein;protein_id=MCP9537657.1;transl_table=11 JANDXE010000016.1 Genbank gene 65548 66297 . - . ID=gene-NND05_08835;Name=NND05_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08835 JANDXE010000016.1 Protein Homology CDS 65548 66297 . - 0 ID=cds-MCP9537658.1;Parent=gene-NND05_08835;Dbxref=NCBI_GP:MCP9537658.1;Name=MCP9537658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849290.1;locus_tag=NND05_08835;product=RNA methyltransferase;protein_id=MCP9537658.1;transl_table=11 JANDXE010000016.1 Genbank gene 66428 68668 . + . ID=gene-NND05_08840;Name=NND05_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08840 JANDXE010000016.1 Protein Homology CDS 66428 68668 . + 0 ID=cds-MCP9537659.1;Parent=gene-NND05_08840;Dbxref=NCBI_GP:MCP9537659.1;Name=MCP9537659.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463563.1;locus_tag=NND05_08840;product=BamA/TamA family outer membrane protein;protein_id=MCP9537659.1;transl_table=11 JANDXE010000016.1 Genbank gene 68622 69101 . - . ID=gene-NND05_08845;Name=NND05_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08845 JANDXE010000016.1 GeneMarkS-2+ CDS 68622 69101 . - 0 ID=cds-MCP9537660.1;Parent=gene-NND05_08845;Dbxref=NCBI_GP:MCP9537660.1;Name=MCP9537660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08845;product=hypothetical protein;protein_id=MCP9537660.1;transl_table=11 JANDXE010000016.1 Genbank gene 69215 70018 . + . ID=gene-NND05_08850;Name=NND05_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08850 JANDXE010000016.1 Protein Homology CDS 69215 70018 . + 0 ID=cds-MCP9537661.1;Parent=gene-NND05_08850;Dbxref=NCBI_GP:MCP9537661.1;Name=MCP9537661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919163.1;locus_tag=NND05_08850;product=MBL fold metallo-hydrolase;protein_id=MCP9537661.1;transl_table=11 JANDXE010000016.1 Genbank gene 70404 71687 . - . ID=gene-NND05_08855;Name=NND05_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08855 JANDXE010000016.1 Protein Homology CDS 70404 71687 . - 0 ID=cds-MCP9537662.1;Parent=gene-NND05_08855;Dbxref=NCBI_GP:MCP9537662.1;Name=MCP9537662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346238.1;locus_tag=NND05_08855;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=MCP9537662.1;transl_table=11 JANDXE010000016.1 Genbank gene 71834 72202 . - . ID=gene-NND05_08860;Name=NND05_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08860 JANDXE010000016.1 Protein Homology CDS 71834 72202 . - 0 ID=cds-MCP9537663.1;Parent=gene-NND05_08860;Dbxref=NCBI_GP:MCP9537663.1;Name=MCP9537663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007748119.1;locus_tag=NND05_08860;product=DMT family protein;protein_id=MCP9537663.1;transl_table=11 JANDXE010000016.1 Genbank gene 72449 72521 . + . ID=gene-NND05_08865;Name=NND05_08865;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_08865 JANDXE010000016.1 tRNAscan-SE tRNA 72449 72521 . + . ID=rna-NND05_08865;Parent=gene-NND05_08865;anticodon=(pos:72482..72484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08865;product=tRNA-Lys JANDXE010000016.1 tRNAscan-SE exon 72449 72521 . + . ID=exon-NND05_08865-1;Parent=rna-NND05_08865;anticodon=(pos:72482..72484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_08865;product=tRNA-Lys JANDXE010000016.1 Genbank gene 72873 73298 . - . ID=gene-NND05_08870;Name=NND05_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08870 JANDXE010000016.1 Protein Homology CDS 72873 73298 . - 0 ID=cds-MCP9537664.1;Parent=gene-NND05_08870;Dbxref=NCBI_GP:MCP9537664.1;Name=MCP9537664.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848696.1;locus_tag=NND05_08870;product=transcriptional repressor;protein_id=MCP9537664.1;transl_table=11 JANDXE010000016.1 Genbank gene 73317 74012 . - . ID=gene-NND05_08875;Name=NND05_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08875 JANDXE010000016.1 Protein Homology CDS 73317 74012 . - 0 ID=cds-MCP9537665.1;Parent=gene-NND05_08875;Dbxref=NCBI_GP:MCP9537665.1;Name=MCP9537665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846813.1;locus_tag=NND05_08875;product=hypothetical protein;protein_id=MCP9537665.1;transl_table=11 JANDXE010000016.1 Genbank gene 73990 74808 . - . ID=gene-NND05_08880;Name=NND05_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08880 JANDXE010000016.1 Protein Homology CDS 73990 74808 . - 0 ID=cds-MCP9537666.1;Parent=gene-NND05_08880;Dbxref=NCBI_GP:MCP9537666.1;Name=MCP9537666.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018711878.1;locus_tag=NND05_08880;product=metallophosphoesterase;protein_id=MCP9537666.1;transl_table=11 JANDXE010000016.1 Genbank gene 75060 75659 . - . ID=gene-NND05_08885;Name=NND05_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08885 JANDXE010000016.1 Protein Homology CDS 75060 75659 . - 0 ID=cds-MCP9537667.1;Parent=gene-NND05_08885;Dbxref=NCBI_GP:MCP9537667.1;Name=MCP9537667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848754.1;locus_tag=NND05_08885;product=DNA-binding protein;protein_id=MCP9537667.1;transl_table=11 JANDXE010000016.1 Genbank gene 75795 75887 . - . ID=gene-NND05_08890;Name=NND05_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08890 JANDXE010000016.1 Protein Homology CDS 75795 75887 . - 0 ID=cds-MCP9537668.1;Parent=gene-NND05_08890;Dbxref=NCBI_GP:MCP9537668.1;Name=MCP9537668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004303901.1;locus_tag=NND05_08890;product=smalltalk protein;protein_id=MCP9537668.1;transl_table=11 JANDXE010000016.1 Genbank gene 76853 78400 . + . ID=gene-NND05_08895;Name=NND05_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08895 JANDXE010000016.1 GeneMarkS-2+ CDS 76853 78400 . + 0 ID=cds-MCP9537669.1;Parent=gene-NND05_08895;Dbxref=NCBI_GP:MCP9537669.1;Name=MCP9537669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08895;product=hypothetical protein;protein_id=MCP9537669.1;transl_table=11 JANDXE010000016.1 Genbank gene 78397 79026 . + . ID=gene-NND05_08900;Name=NND05_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08900 JANDXE010000016.1 GeneMarkS-2+ CDS 78397 79026 . + 0 ID=cds-MCP9537670.1;Parent=gene-NND05_08900;Dbxref=NCBI_GP:MCP9537670.1;Name=MCP9537670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08900;product=hypothetical protein;protein_id=MCP9537670.1;transl_table=11 JANDXE010000016.1 Genbank gene 79252 80697 . + . ID=gene-NND05_08905;Name=NND05_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08905 JANDXE010000016.1 GeneMarkS-2+ CDS 79252 80697 . + 0 ID=cds-MCP9537671.1;Parent=gene-NND05_08905;Dbxref=NCBI_GP:MCP9537671.1;Name=MCP9537671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08905;product=hypothetical protein;protein_id=MCP9537671.1;transl_table=11 JANDXE010000016.1 Genbank gene 80783 81811 . + . ID=gene-NND05_08910;Name=NND05_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08910 JANDXE010000016.1 Protein Homology CDS 80783 81811 . + 0 ID=cds-MCP9537672.1;Parent=gene-NND05_08910;Dbxref=NCBI_GP:MCP9537672.1;Name=MCP9537672.1;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF013930.2;locus_tag=NND05_08910;product=CHC2 zinc finger domain-containing protein;protein_id=MCP9537672.1;transl_table=11 JANDXE010000016.1 Genbank gene 81852 82331 . + . ID=gene-NND05_08915;Name=NND05_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08915 JANDXE010000016.1 GeneMarkS-2+ CDS 81852 82331 . + 0 ID=cds-MCP9537673.1;Parent=gene-NND05_08915;Dbxref=NCBI_GP:MCP9537673.1;Name=MCP9537673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08915;product=hypothetical protein;protein_id=MCP9537673.1;transl_table=11 JANDXE010000016.1 Genbank gene 82460 83755 . - . ID=gene-NND05_08920;Name=NND05_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08920 JANDXE010000016.1 Protein Homology CDS 82460 83755 . - 0 ID=cds-MCP9537674.1;Parent=gene-NND05_08920;Dbxref=NCBI_GP:MCP9537674.1;Name=MCP9537674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005828806.1;locus_tag=NND05_08920;product=ATP-binding protein;protein_id=MCP9537674.1;transl_table=11 JANDXE010000016.1 Genbank gene 83925 84161 . - . ID=gene-NND05_08925;Name=NND05_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08925 JANDXE010000016.1 GeneMarkS-2+ CDS 83925 84161 . - 0 ID=cds-MCP9537675.1;Parent=gene-NND05_08925;Dbxref=NCBI_GP:MCP9537675.1;Name=MCP9537675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08925;product=dephospho-CoA kinase;protein_id=MCP9537675.1;transl_table=11 JANDXE010000016.1 Genbank gene 84185 84631 . - . ID=gene-NND05_08930;Name=NND05_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08930 JANDXE010000016.1 GeneMarkS-2+ CDS 84185 84631 . - 0 ID=cds-MCP9537676.1;Parent=gene-NND05_08930;Dbxref=NCBI_GP:MCP9537676.1;Name=MCP9537676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08930;product=hypothetical protein;protein_id=MCP9537676.1;transl_table=11 JANDXE010000016.1 Genbank gene 84814 85095 . + . ID=gene-NND05_08935;Name=NND05_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08935 JANDXE010000016.1 GeneMarkS-2+ CDS 84814 85095 . + 0 ID=cds-MCP9537677.1;Parent=gene-NND05_08935;Dbxref=NCBI_GP:MCP9537677.1;Name=MCP9537677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08935;product=hypothetical protein;protein_id=MCP9537677.1;transl_table=11 JANDXE010000016.1 Genbank gene 85086 85427 . + . ID=gene-NND05_08940;Name=NND05_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08940 JANDXE010000016.1 GeneMarkS-2+ CDS 85086 85427 . + 0 ID=cds-MCP9537678.1;Parent=gene-NND05_08940;Dbxref=NCBI_GP:MCP9537678.1;Name=MCP9537678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08940;product=hypothetical protein;protein_id=MCP9537678.1;transl_table=11 JANDXE010000016.1 Genbank gene 85519 87111 . - . ID=gene-NND05_08945;Name=NND05_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08945 JANDXE010000016.1 Protein Homology CDS 85519 87111 . - 0 ID=cds-MCP9537679.1;Parent=gene-NND05_08945;Dbxref=NCBI_GP:MCP9537679.1;Name=MCP9537679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846736.1;locus_tag=NND05_08945;product=ATP-binding protein;protein_id=MCP9537679.1;transl_table=11 JANDXE010000016.1 Genbank gene 87248 88426 . - . ID=gene-NND05_08950;Name=NND05_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08950 JANDXE010000016.1 Protein Homology CDS 87248 88426 . - 0 ID=cds-MCP9537680.1;Parent=gene-NND05_08950;Dbxref=NCBI_GP:MCP9537680.1;Name=MCP9537680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127360.1;locus_tag=NND05_08950;product=acyltransferase;protein_id=MCP9537680.1;transl_table=11 ##sequence-region JANDXE010000017.1 1 88243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000017.1 Genbank region 1 88243 . + . ID=JANDXE010000017.1:1..88243;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000017.1 Genbank gene 1 188 . - . ID=gene-NND05_08955;Name=NND05_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08955;partial=true;start_range=.,1 JANDXE010000017.1 GeneMarkS-2+ CDS 1 188 . - 0 ID=cds-MCP9537681.1;Parent=gene-NND05_08955;Dbxref=NCBI_GP:MCP9537681.1;Name=MCP9537681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08955;partial=true;product=hypothetical protein;protein_id=MCP9537681.1;start_range=.,1;transl_table=11 JANDXE010000017.1 Genbank pseudogene 218 382 . - . ID=gene-NND05_08960;Name=NND05_08960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_08960;pseudo=true JANDXE010000017.1 Protein Homology CDS 218 382 . - 0 ID=cds-NND05_08960;Parent=gene-NND05_08960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004311719.1;locus_tag=NND05_08960;product=recombinase family protein;pseudo=true;transl_table=11 JANDXE010000017.1 Genbank gene 427 1227 . - . ID=gene-NND05_08965;Name=NND05_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08965 JANDXE010000017.1 Protein Homology CDS 427 1227 . - 0 ID=cds-MCP9537682.1;Parent=gene-NND05_08965;Dbxref=NCBI_GP:MCP9537682.1;Name=MCP9537682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.2;locus_tag=NND05_08965;product=pilus assembly protein N-terminal domain-containing protein;protein_id=MCP9537682.1;transl_table=11 JANDXE010000017.1 Genbank gene 1532 1630 . - . ID=gene-NND05_08970;Name=NND05_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08970 JANDXE010000017.1 Protein Homology CDS 1532 1630 . - 0 ID=cds-MCP9537683.1;Parent=gene-NND05_08970;Dbxref=NCBI_GP:MCP9537683.1;Name=MCP9537683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.2;locus_tag=NND05_08970;product=Abi family protein;protein_id=MCP9537683.1;transl_table=11 JANDXE010000017.1 Genbank gene 3302 4036 . + . ID=gene-NND05_08975;Name=NND05_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08975 JANDXE010000017.1 Protein Homology CDS 3302 4036 . + 0 ID=cds-MCP9537684.1;Parent=gene-NND05_08975;Dbxref=NCBI_GP:MCP9537684.1;Name=MCP9537684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847114.1;locus_tag=NND05_08975;product=DNA-binding protein;protein_id=MCP9537684.1;transl_table=11 JANDXE010000017.1 Genbank gene 4095 4190 . + . ID=gene-NND05_08980;Name=NND05_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08980 JANDXE010000017.1 Protein Homology CDS 4095 4190 . + 0 ID=cds-MCP9537685.1;Parent=gene-NND05_08980;Dbxref=NCBI_GP:MCP9537685.1;Name=MCP9537685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015310466.1;locus_tag=NND05_08980;product=smalltalk protein;protein_id=MCP9537685.1;transl_table=11 JANDXE010000017.1 Genbank gene 4379 4516 . - . ID=gene-NND05_08985;Name=NND05_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08985 JANDXE010000017.1 Protein Homology CDS 4379 4516 . - 0 ID=cds-MCP9537686.1;Parent=gene-NND05_08985;Dbxref=NCBI_GP:MCP9537686.1;Name=MCP9537686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03071.1;locus_tag=NND05_08985;product=hypothetical protein;protein_id=MCP9537686.1;transl_table=11 JANDXE010000017.1 Genbank gene 4793 6676 . - . ID=gene-NND05_08990;Name=NND05_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08990 JANDXE010000017.1 Protein Homology CDS 4793 6676 . - 0 ID=cds-MCP9537687.1;Parent=gene-NND05_08990;Dbxref=NCBI_GP:MCP9537687.1;Name=MCP9537687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=NND05_08990;product=leucine-rich repeat protein;protein_id=MCP9537687.1;transl_table=11 JANDXE010000017.1 Genbank gene 6749 7555 . - . ID=gene-NND05_08995;Name=NND05_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_08995 JANDXE010000017.1 GeneMarkS-2+ CDS 6749 7555 . - 0 ID=cds-MCP9537688.1;Parent=gene-NND05_08995;Dbxref=NCBI_GP:MCP9537688.1;Name=MCP9537688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_08995;product=hypothetical protein;protein_id=MCP9537688.1;transl_table=11 JANDXE010000017.1 Genbank gene 7573 9036 . - . ID=gene-NND05_09000;Name=NND05_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09000 JANDXE010000017.1 Protein Homology CDS 7573 9036 . - 0 ID=cds-MCP9537689.1;Parent=gene-NND05_09000;Dbxref=NCBI_GP:MCP9537689.1;Name=MCP9537689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025840.2;locus_tag=NND05_09000;product=DarT ssDNA thymidine ADP-ribosyltransferase family protein;protein_id=MCP9537689.1;transl_table=11 JANDXE010000017.1 Genbank gene 9059 9673 . - . ID=gene-NND05_09005;Name=NND05_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09005 JANDXE010000017.1 Protein Homology CDS 9059 9673 . - 0 ID=cds-MCP9537690.1;Parent=gene-NND05_09005;Dbxref=NCBI_GP:MCP9537690.1;Name=MCP9537690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919789.1;locus_tag=NND05_09005;product=hypothetical protein;protein_id=MCP9537690.1;transl_table=11 JANDXE010000017.1 Genbank gene 9679 11853 . - . ID=gene-NND05_09010;Name=NND05_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09010 JANDXE010000017.1 Protein Homology CDS 9679 11853 . - 0 ID=cds-MCP9537691.1;Parent=gene-NND05_09010;Dbxref=NCBI_GP:MCP9537691.1;Name=MCP9537691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=NND05_09010;product=leucine-rich repeat protein;protein_id=MCP9537691.1;transl_table=11 JANDXE010000017.1 Genbank gene 12183 12956 . - . ID=gene-NND05_09015;Name=NND05_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09015 JANDXE010000017.1 Protein Homology CDS 12183 12956 . - 0 ID=cds-MCP9537692.1;Parent=gene-NND05_09015;Dbxref=NCBI_GP:MCP9537692.1;Name=MCP9537692.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897024.1;locus_tag=NND05_09015;product=metallophosphoesterase;protein_id=MCP9537692.1;transl_table=11 JANDXE010000017.1 Genbank gene 13090 13734 . - . ID=gene-NND05_09020;Name=NND05_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09020 JANDXE010000017.1 GeneMarkS-2+ CDS 13090 13734 . - 0 ID=cds-MCP9537693.1;Parent=gene-NND05_09020;Dbxref=NCBI_GP:MCP9537693.1;Name=MCP9537693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09020;product=hypothetical protein;protein_id=MCP9537693.1;transl_table=11 JANDXE010000017.1 Genbank gene 13728 14699 . - . ID=gene-NND05_09025;Name=NND05_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09025 JANDXE010000017.1 GeneMarkS-2+ CDS 13728 14699 . - 0 ID=cds-MCP9537694.1;Parent=gene-NND05_09025;Dbxref=NCBI_GP:MCP9537694.1;Name=MCP9537694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09025;product=hypothetical protein;protein_id=MCP9537694.1;transl_table=11 JANDXE010000017.1 Genbank gene 14932 16272 . - . ID=gene-NND05_09030;Name=NND05_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09030 JANDXE010000017.1 Protein Homology CDS 14932 16272 . - 0 ID=cds-MCP9537695.1;Parent=gene-NND05_09030;Dbxref=NCBI_GP:MCP9537695.1;Name=MCP9537695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009275658.1;locus_tag=NND05_09030;product=OmpA family protein;protein_id=MCP9537695.1;transl_table=11 JANDXE010000017.1 Genbank gene 16322 17779 . - . ID=gene-NND05_09035;Name=NND05_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09035 JANDXE010000017.1 Protein Homology CDS 16322 17779 . - 0 ID=cds-MCP9537696.1;Parent=gene-NND05_09035;Dbxref=NCBI_GP:MCP9537696.1;Name=MCP9537696.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668647.1;locus_tag=NND05_09035;product=plasmid recombination protein;protein_id=MCP9537696.1;transl_table=11 JANDXE010000017.1 Genbank gene 18046 18960 . - . ID=gene-NND05_09040;Name=NND05_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09040 JANDXE010000017.1 Protein Homology CDS 18046 18960 . - 0 ID=cds-MCP9537697.1;Parent=gene-NND05_09040;Dbxref=NCBI_GP:MCP9537697.1;Name=MCP9537697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018452239.1;locus_tag=NND05_09040;product=hypothetical protein;protein_id=MCP9537697.1;transl_table=11 JANDXE010000017.1 Genbank gene 19019 19516 . - . ID=gene-NND05_09045;Name=NND05_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09045 JANDXE010000017.1 Protein Homology CDS 19019 19516 . - 0 ID=cds-MCP9537698.1;Parent=gene-NND05_09045;Dbxref=NCBI_GP:MCP9537698.1;Name=MCP9537698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668646.1;locus_tag=NND05_09045;product=hypothetical protein;protein_id=MCP9537698.1;transl_table=11 JANDXE010000017.1 Genbank gene 19529 19936 . - . ID=gene-NND05_09050;Name=NND05_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09050 JANDXE010000017.1 Protein Homology CDS 19529 19936 . - 0 ID=cds-MCP9537699.1;Parent=gene-NND05_09050;Dbxref=NCBI_GP:MCP9537699.1;Name=MCP9537699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009275656.1;locus_tag=NND05_09050;product=hypothetical protein;protein_id=MCP9537699.1;transl_table=11 JANDXE010000017.1 Genbank gene 19926 20216 . - . ID=gene-NND05_09055;Name=NND05_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09055 JANDXE010000017.1 Protein Homology CDS 19926 20216 . - 0 ID=cds-MCP9537700.1;Parent=gene-NND05_09055;Dbxref=NCBI_GP:MCP9537700.1;Name=MCP9537700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668645.1;locus_tag=NND05_09055;product=hypothetical protein;protein_id=MCP9537700.1;transl_table=11 JANDXE010000017.1 Genbank gene 20289 20744 . - . ID=gene-NND05_09060;Name=NND05_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09060 JANDXE010000017.1 Protein Homology CDS 20289 20744 . - 0 ID=cds-MCP9537701.1;Parent=gene-NND05_09060;Dbxref=NCBI_GP:MCP9537701.1;Name=MCP9537701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312132.1;locus_tag=NND05_09060;product=hypothetical protein;protein_id=MCP9537701.1;transl_table=11 JANDXE010000017.1 Genbank gene 20757 21635 . - . ID=gene-NND05_09065;Name=NND05_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09065 JANDXE010000017.1 Protein Homology CDS 20757 21635 . - 0 ID=cds-MCP9537702.1;Parent=gene-NND05_09065;Dbxref=NCBI_GP:MCP9537702.1;Name=MCP9537702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668644.1;locus_tag=NND05_09065;product=hypothetical protein;protein_id=MCP9537702.1;transl_table=11 JANDXE010000017.1 Genbank gene 22183 22812 . + . ID=gene-NND05_09070;Name=NND05_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09070 JANDXE010000017.1 Protein Homology CDS 22183 22812 . + 0 ID=cds-MCP9537703.1;Parent=gene-NND05_09070;Dbxref=NCBI_GP:MCP9537703.1;Name=MCP9537703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005816288.1;locus_tag=NND05_09070;product=recombinase family protein;protein_id=MCP9537703.1;transl_table=11 JANDXE010000017.1 Genbank gene 22835 23635 . + . ID=gene-NND05_09075;Name=NND05_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09075 JANDXE010000017.1 Protein Homology CDS 22835 23635 . + 0 ID=cds-MCP9537704.1;Parent=gene-NND05_09075;Dbxref=NCBI_GP:MCP9537704.1;Name=MCP9537704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312129.1;locus_tag=NND05_09075;product=DUF1653 domain-containing protein;protein_id=MCP9537704.1;transl_table=11 JANDXE010000017.1 Genbank gene 23638 23937 . + . ID=gene-NND05_09080;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NND05_09080 JANDXE010000017.1 Protein Homology CDS 23638 23937 . + 0 ID=cds-MCP9537705.1;Parent=gene-NND05_09080;Dbxref=NCBI_GP:MCP9537705.1;Name=MCP9537705.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009317689.1;locus_tag=NND05_09080;product=thioredoxin;protein_id=MCP9537705.1;transl_table=11 JANDXE010000017.1 Genbank gene 23942 24238 . + . ID=gene-NND05_09085;Name=NND05_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09085 JANDXE010000017.1 Protein Homology CDS 23942 24238 . + 0 ID=cds-MCP9537706.1;Parent=gene-NND05_09085;Dbxref=NCBI_GP:MCP9537706.1;Name=MCP9537706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007215751.1;locus_tag=NND05_09085;product=nitrous oxide-stimulated promoter family protein;protein_id=MCP9537706.1;transl_table=11 JANDXE010000017.1 Genbank gene 24255 24890 . + . ID=gene-NND05_09090;Name=NND05_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09090 JANDXE010000017.1 Protein Homology CDS 24255 24890 . + 0 ID=cds-MCP9537707.1;Parent=gene-NND05_09090;Dbxref=NCBI_GP:MCP9537707.1;Name=MCP9537707.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:NF024811.2;locus_tag=NND05_09090;product=HAD-IA family hydrolase;protein_id=MCP9537707.1;transl_table=11 JANDXE010000017.1 Genbank gene 24895 25272 . + . ID=gene-NND05_09095;Name=NND05_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09095 JANDXE010000017.1 Protein Homology CDS 24895 25272 . + 0 ID=cds-MCP9537708.1;Parent=gene-NND05_09095;Dbxref=NCBI_GP:MCP9537708.1;Name=MCP9537708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846501.1;locus_tag=NND05_09095;product=YccF domain-containing protein;protein_id=MCP9537708.1;transl_table=11 JANDXE010000017.1 Genbank gene 25291 25578 . + . ID=gene-NND05_09100;Name=NND05_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09100 JANDXE010000017.1 Protein Homology CDS 25291 25578 . + 0 ID=cds-MCP9537709.1;Parent=gene-NND05_09100;Dbxref=NCBI_GP:MCP9537709.1;Name=MCP9537709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235810.1;locus_tag=NND05_09100;product=DUF1294 domain-containing protein;protein_id=MCP9537709.1;transl_table=11 JANDXE010000017.1 Genbank gene 25599 26162 . + . ID=gene-NND05_09105;Name=NND05_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09105 JANDXE010000017.1 Protein Homology CDS 25599 26162 . + 0 ID=cds-MCP9537710.1;Parent=gene-NND05_09105;Dbxref=NCBI_GP:MCP9537710.1;Name=MCP9537710.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364344.1;locus_tag=NND05_09105;product=flavin reductase;protein_id=MCP9537710.1;transl_table=11 JANDXE010000017.1 Genbank gene 26191 27243 . + . ID=gene-NND05_09110;Name=NND05_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09110 JANDXE010000017.1 Protein Homology CDS 26191 27243 . + 0 ID=cds-MCP9537711.1;Parent=gene-NND05_09110;Dbxref=NCBI_GP:MCP9537711.1;Name=MCP9537711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462385.1;locus_tag=NND05_09110;product=winged helix DNA-binding domain-containing protein;protein_id=MCP9537711.1;transl_table=11 JANDXE010000017.1 Genbank gene 27233 27472 . + . ID=gene-NND05_09115;Name=NND05_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09115 JANDXE010000017.1 Protein Homology CDS 27233 27472 . + 0 ID=cds-MCP9537712.1;Parent=gene-NND05_09115;Dbxref=NCBI_GP:MCP9537712.1;Name=MCP9537712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005816304.1;locus_tag=NND05_09115;product=hypothetical protein;protein_id=MCP9537712.1;transl_table=11 JANDXE010000017.1 Genbank gene 27473 28213 . + . ID=gene-NND05_09120;Name=NND05_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09120 JANDXE010000017.1 Protein Homology CDS 27473 28213 . + 0 ID=cds-MCP9537713.1;Parent=gene-NND05_09120;Dbxref=NCBI_GP:MCP9537713.1;Name=MCP9537713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007558715.1;locus_tag=NND05_09120;product=DUF6198 family protein;protein_id=MCP9537713.1;transl_table=11 JANDXE010000017.1 Genbank gene 28256 28915 . + . ID=gene-NND05_09125;Name=NND05_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09125 JANDXE010000017.1 Protein Homology CDS 28256 28915 . + 0 ID=cds-MCP9537714.1;Parent=gene-NND05_09125;Dbxref=NCBI_GP:MCP9537714.1;Name=MCP9537714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899620.1;locus_tag=NND05_09125;product=hypothetical protein;protein_id=MCP9537714.1;transl_table=11 JANDXE010000017.1 Genbank gene 28927 29607 . + . ID=gene-NND05_09130;Name=NND05_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09130 JANDXE010000017.1 Protein Homology CDS 28927 29607 . + 0 ID=cds-MCP9537715.1;Parent=gene-NND05_09130;Dbxref=NCBI_GP:MCP9537715.1;Name=MCP9537715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846558.1;locus_tag=NND05_09130;product=DNA alkylation repair protein;protein_id=MCP9537715.1;transl_table=11 JANDXE010000017.1 Genbank gene 30250 30765 . + . ID=gene-NND05_09135;Name=NND05_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09135 JANDXE010000017.1 Protein Homology CDS 30250 30765 . + 0 ID=cds-MCP9537716.1;Parent=gene-NND05_09135;Dbxref=NCBI_GP:MCP9537716.1;Name=MCP9537716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898825.1;locus_tag=NND05_09135;product=GNAT family N-acetyltransferase;protein_id=MCP9537716.1;transl_table=11 JANDXE010000017.1 Genbank gene 30873 31763 . + . ID=gene-NND05_09140;Name=NND05_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09140 JANDXE010000017.1 Protein Homology CDS 30873 31763 . + 0 ID=cds-MCP9537717.1;Parent=gene-NND05_09140;Dbxref=NCBI_GP:MCP9537717.1;Name=MCP9537717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898848.1;locus_tag=NND05_09140;product=helix-turn-helix transcriptional regulator;protein_id=MCP9537717.1;transl_table=11 JANDXE010000017.1 Genbank gene 32056 34023 . + . ID=gene-NND05_09145;Name=NND05_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09145 JANDXE010000017.1 Protein Homology CDS 32056 34023 . + 0 ID=cds-MCP9537718.1;Parent=gene-NND05_09145;Dbxref=NCBI_GP:MCP9537718.1;Name=MCP9537718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900240.1;locus_tag=NND05_09145;product=KUP/HAK/KT family potassium transporter;protein_id=MCP9537718.1;transl_table=11 JANDXE010000017.1 Genbank gene 34138 34902 . + . ID=gene-NND05_09150;Name=NND05_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09150 JANDXE010000017.1 Protein Homology CDS 34138 34902 . + 0 ID=cds-MCP9537719.1;Parent=gene-NND05_09150;Dbxref=NCBI_GP:MCP9537719.1;Name=MCP9537719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846441.1;locus_tag=NND05_09150;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=MCP9537719.1;transl_table=11 JANDXE010000017.1 Genbank gene 34935 37169 . + . ID=gene-NND05_09155;Name=NND05_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09155 JANDXE010000017.1 Protein Homology CDS 34935 37169 . + 0 ID=cds-MCP9537720.1;Parent=gene-NND05_09155;Dbxref=NCBI_GP:MCP9537720.1;Name=MCP9537720.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846560.1;locus_tag=NND05_09155;product=ATP-dependent RecD-like DNA helicase;protein_id=MCP9537720.1;transl_table=11 JANDXE010000017.1 Genbank gene 37153 37371 . - . ID=gene-NND05_09160;Name=NND05_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09160 JANDXE010000017.1 Protein Homology CDS 37153 37371 . - 0 ID=cds-MCP9537721.1;Parent=gene-NND05_09160;Dbxref=NCBI_GP:MCP9537721.1;Name=MCP9537721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012621.2;locus_tag=NND05_09160;product=heavy-metal-associated domain-containing protein;protein_id=MCP9537721.1;transl_table=11 JANDXE010000017.1 Genbank gene 37442 38656 . + . ID=gene-NND05_09165;Name=NND05_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09165 JANDXE010000017.1 Protein Homology CDS 37442 38656 . + 0 ID=cds-MCP9537722.1;Parent=gene-NND05_09165;Dbxref=NCBI_GP:MCP9537722.1;Name=MCP9537722.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018710142.1;locus_tag=NND05_09165;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCP9537722.1;transl_table=11 JANDXE010000017.1 Genbank gene 38744 40378 . + . ID=gene-NND05_09170;Name=NND05_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09170 JANDXE010000017.1 Protein Homology CDS 38744 40378 . + 0 ID=cds-MCP9537723.1;Parent=gene-NND05_09170;Dbxref=NCBI_GP:MCP9537723.1;Name=MCP9537723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008616736.1;locus_tag=NND05_09170;product=ATP-binding cassette domain-containing protein;protein_id=MCP9537723.1;transl_table=11 JANDXE010000017.1 Genbank gene 40503 42233 . - . ID=gene-NND05_09175;Name=NND05_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09175 JANDXE010000017.1 Protein Homology CDS 40503 42233 . - 0 ID=cds-MCP9537724.1;Parent=gene-NND05_09175;Dbxref=NCBI_GP:MCP9537724.1;Name=MCP9537724.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012442.2;locus_tag=NND05_09175;product=HU family DNA-binding protein;protein_id=MCP9537724.1;transl_table=11 JANDXE010000017.1 Genbank gene 42226 42519 . - . ID=gene-NND05_09180;Name=NND05_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09180 JANDXE010000017.1 Protein Homology CDS 42226 42519 . - 0 ID=cds-MCP9537725.1;Parent=gene-NND05_09180;Dbxref=NCBI_GP:MCP9537725.1;Name=MCP9537725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370489.1;locus_tag=NND05_09180;product=HU family DNA-binding protein;protein_id=MCP9537725.1;transl_table=11 JANDXE010000017.1 Genbank gene 42547 43848 . - . ID=gene-NND05_09185;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=NND05_09185 JANDXE010000017.1 Protein Homology CDS 42547 43848 . - 0 ID=cds-MCP9537726.1;Parent=gene-NND05_09185;Dbxref=NCBI_GP:MCP9537726.1;Name=MCP9537726.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004374873.1;locus_tag=NND05_09185;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=MCP9537726.1;transl_table=11 JANDXE010000017.1 Genbank gene 43954 44907 . - . ID=gene-NND05_09190;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=NND05_09190 JANDXE010000017.1 Protein Homology CDS 43954 44907 . - 0 ID=cds-MCP9537727.1;Parent=gene-NND05_09190;Dbxref=NCBI_GP:MCP9537727.1;Name=MCP9537727.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846481.1;locus_tag=NND05_09190;product=signal recognition particle-docking protein FtsY;protein_id=MCP9537727.1;transl_table=11 JANDXE010000017.1 Genbank gene 45124 46077 . + . ID=gene-NND05_09195;Name=NND05_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09195 JANDXE010000017.1 Protein Homology CDS 45124 46077 . + 0 ID=cds-MCP9537728.1;Parent=gene-NND05_09195;Dbxref=NCBI_GP:MCP9537728.1;Name=MCP9537728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346907.1;locus_tag=NND05_09195;product=DUF4468 domain-containing protein;protein_id=MCP9537728.1;transl_table=11 JANDXE010000017.1 Genbank gene 46095 46433 . + . ID=gene-NND05_09200;Name=NND05_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09200 JANDXE010000017.1 Protein Homology CDS 46095 46433 . + 0 ID=cds-MCP9537729.1;Parent=gene-NND05_09200;Dbxref=NCBI_GP:MCP9537729.1;Name=MCP9537729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133423.1;locus_tag=NND05_09200;product=mechanosensitive ion channel protein MscS;protein_id=MCP9537729.1;transl_table=11 JANDXE010000017.1 Genbank gene 46437 48812 . + . ID=gene-NND05_09205;Name=NND05_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09205 JANDXE010000017.1 Protein Homology CDS 46437 48812 . + 0 ID=cds-MCP9537730.1;Parent=gene-NND05_09205;Dbxref=NCBI_GP:MCP9537730.1;Name=MCP9537730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411619.1;locus_tag=NND05_09205;product=putative porin;protein_id=MCP9537730.1;transl_table=11 JANDXE010000017.1 Genbank gene 48942 49862 . + . ID=gene-NND05_09210;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=NND05_09210 JANDXE010000017.1 Protein Homology CDS 48942 49862 . + 0 ID=cds-MCP9537731.1;Parent=gene-NND05_09210;Dbxref=NCBI_GP:MCP9537731.1;Name=MCP9537731.1;Ontology_term=GO:0009234,GO:0046428;gbkey=CDS;gene=menA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846709.1;locus_tag=NND05_09210;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=MCP9537731.1;transl_table=11 JANDXE010000017.1 Genbank gene 49984 50625 . + . ID=gene-NND05_09215;Name=NND05_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09215 JANDXE010000017.1 Protein Homology CDS 49984 50625 . + 0 ID=cds-MCP9537732.1;Parent=gene-NND05_09215;Dbxref=NCBI_GP:MCP9537732.1;Name=MCP9537732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822716.1;locus_tag=NND05_09215;product=HD domain-containing protein;protein_id=MCP9537732.1;transl_table=11 JANDXE010000017.1 Genbank gene 51212 51299 . + . ID=gene-NND05_09220;Name=NND05_09220;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09220 JANDXE010000017.1 tRNAscan-SE tRNA 51212 51299 . + . ID=rna-NND05_09220;Parent=gene-NND05_09220;anticodon=(pos:51246..51248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09220;product=tRNA-Ser JANDXE010000017.1 tRNAscan-SE exon 51212 51299 . + . ID=exon-NND05_09220-1;Parent=rna-NND05_09220;anticodon=(pos:51246..51248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09220;product=tRNA-Ser JANDXE010000017.1 Genbank gene 51326 51397 . + . ID=gene-NND05_09225;Name=NND05_09225;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09225 JANDXE010000017.1 tRNAscan-SE tRNA 51326 51397 . + . ID=rna-NND05_09225;Parent=gene-NND05_09225;anticodon=(pos:51359..51361);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09225;product=tRNA-Glu JANDXE010000017.1 tRNAscan-SE exon 51326 51397 . + . ID=exon-NND05_09225-1;Parent=rna-NND05_09225;anticodon=(pos:51359..51361);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09225;product=tRNA-Glu JANDXE010000017.1 Genbank gene 51469 51540 . + . ID=gene-NND05_09230;Name=NND05_09230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09230 JANDXE010000017.1 tRNAscan-SE tRNA 51469 51540 . + . ID=rna-NND05_09230;Parent=gene-NND05_09230;anticodon=(pos:51502..51504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09230;product=tRNA-Glu JANDXE010000017.1 tRNAscan-SE exon 51469 51540 . + . ID=exon-NND05_09230-1;Parent=rna-NND05_09230;anticodon=(pos:51502..51504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09230;product=tRNA-Glu JANDXE010000017.1 Genbank gene 51612 51683 . + . ID=gene-NND05_09235;Name=NND05_09235;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09235 JANDXE010000017.1 tRNAscan-SE tRNA 51612 51683 . + . ID=rna-NND05_09235;Parent=gene-NND05_09235;anticodon=(pos:51645..51647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09235;product=tRNA-Glu JANDXE010000017.1 tRNAscan-SE exon 51612 51683 . + . ID=exon-NND05_09235-1;Parent=rna-NND05_09235;anticodon=(pos:51645..51647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09235;product=tRNA-Glu JANDXE010000017.1 Genbank gene 51920 52006 . + . ID=gene-NND05_09240;Name=NND05_09240;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09240 JANDXE010000017.1 tRNAscan-SE tRNA 51920 52006 . + . ID=rna-NND05_09240;Parent=gene-NND05_09240;anticodon=(pos:51954..51956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09240;product=tRNA-Ser JANDXE010000017.1 tRNAscan-SE exon 51920 52006 . + . ID=exon-NND05_09240-1;Parent=rna-NND05_09240;anticodon=(pos:51954..51956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09240;product=tRNA-Ser JANDXE010000017.1 Genbank gene 52033 52104 . + . ID=gene-NND05_09245;Name=NND05_09245;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09245 JANDXE010000017.1 tRNAscan-SE tRNA 52033 52104 . + . ID=rna-NND05_09245;Parent=gene-NND05_09245;anticodon=(pos:52066..52068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09245;product=tRNA-Glu JANDXE010000017.1 tRNAscan-SE exon 52033 52104 . + . ID=exon-NND05_09245-1;Parent=rna-NND05_09245;anticodon=(pos:52066..52068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09245;product=tRNA-Glu JANDXE010000017.1 Genbank gene 52136 53404 . + . ID=gene-NND05_09250;Name=NND05_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09250 JANDXE010000017.1 Protein Homology CDS 52136 53404 . + 0 ID=cds-MCP9537733.1;Parent=gene-NND05_09250;Dbxref=NCBI_GP:MCP9537733.1;Name=MCP9537733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846711.1;locus_tag=NND05_09250;product=DUF5103 domain-containing protein;protein_id=MCP9537733.1;transl_table=11 JANDXE010000017.1 Genbank gene 53489 54091 . - . ID=gene-NND05_09255;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=NND05_09255 JANDXE010000017.1 Protein Homology CDS 53489 54091 . - 0 ID=cds-MCP9537734.1;Parent=gene-NND05_09255;Dbxref=NCBI_GP:MCP9537734.1;Name=MCP9537734.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005841506.1;locus_tag=NND05_09255;product=electron transport complex subunit RsxA;protein_id=MCP9537734.1;transl_table=11 JANDXE010000017.1 Genbank gene 54132 54716 . - . ID=gene-NND05_09260;Name=NND05_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09260 JANDXE010000017.1 Protein Homology CDS 54132 54716 . - 0 ID=cds-MCP9537735.1;Parent=gene-NND05_09260;Dbxref=NCBI_GP:MCP9537735.1;Name=MCP9537735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848659.1;locus_tag=NND05_09260;product=electron transport complex subunit E;protein_id=MCP9537735.1;transl_table=11 JANDXE010000017.1 Genbank gene 54723 55397 . - . ID=gene-NND05_09265;Name=NND05_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09265 JANDXE010000017.1 Protein Homology CDS 54723 55397 . - 0 ID=cds-MCP9537736.1;Parent=gene-NND05_09265;Dbxref=NCBI_GP:MCP9537736.1;Name=MCP9537736.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848660.1;locus_tag=NND05_09265;product=RnfABCDGE type electron transport complex subunit G;protein_id=MCP9537736.1;transl_table=11 JANDXE010000017.1 Genbank gene 55411 56412 . - . ID=gene-NND05_09270;Name=NND05_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09270 JANDXE010000017.1 Protein Homology CDS 55411 56412 . - 0 ID=cds-MCP9537737.1;Parent=gene-NND05_09270;Dbxref=NCBI_GP:MCP9537737.1;Name=MCP9537737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848661.1;locus_tag=NND05_09270;product=RnfABCDGE type electron transport complex subunit D;protein_id=MCP9537737.1;transl_table=11 JANDXE010000017.1 Genbank gene 56463 57815 . - . ID=gene-NND05_09275;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=NND05_09275 JANDXE010000017.1 Protein Homology CDS 56463 57815 . - 0 ID=cds-MCP9537738.1;Parent=gene-NND05_09275;Dbxref=NCBI_GP:MCP9537738.1;Name=MCP9537738.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848662.1;locus_tag=NND05_09275;product=electron transport complex subunit RsxC;protein_id=MCP9537738.1;transl_table=11 JANDXE010000017.1 Genbank gene 57818 58660 . - . ID=gene-NND05_09280;Name=NND05_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09280 JANDXE010000017.1 Protein Homology CDS 57818 58660 . - 0 ID=cds-MCP9537739.1;Parent=gene-NND05_09280;Dbxref=NCBI_GP:MCP9537739.1;Name=MCP9537739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848663.1;locus_tag=NND05_09280;product=Fe-S cluster domain-containing protein;protein_id=MCP9537739.1;transl_table=11 JANDXE010000017.1 Genbank gene 58751 59170 . - . ID=gene-NND05_09285;Name=NND05_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09285 JANDXE010000017.1 Protein Homology CDS 58751 59170 . - 0 ID=cds-MCP9537740.1;Parent=gene-NND05_09285;Dbxref=NCBI_GP:MCP9537740.1;Name=MCP9537740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848664.1;locus_tag=NND05_09285;product=SoxR reducing system RseC family protein;protein_id=MCP9537740.1;transl_table=11 JANDXE010000017.1 Genbank gene 59523 59975 . + . ID=gene-NND05_09290;Name=NND05_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09290 JANDXE010000017.1 Protein Homology CDS 59523 59975 . + 0 ID=cds-MCP9537741.1;Parent=gene-NND05_09290;Dbxref=NCBI_GP:MCP9537741.1;Name=MCP9537741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340689.1;locus_tag=NND05_09290;product=hypothetical protein;protein_id=MCP9537741.1;transl_table=11 JANDXE010000017.1 Genbank gene 60684 61037 . - . ID=gene-NND05_09295;Name=NND05_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09295 JANDXE010000017.1 Protein Homology CDS 60684 61037 . - 0 ID=cds-MCP9537742.1;Parent=gene-NND05_09295;Dbxref=NCBI_GP:MCP9537742.1;Name=MCP9537742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846646.1;locus_tag=NND05_09295;product=hypothetical protein;protein_id=MCP9537742.1;transl_table=11 JANDXE010000017.1 Genbank gene 61505 61789 . + . ID=gene-NND05_09300;Name=NND05_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09300 JANDXE010000017.1 Protein Homology CDS 61505 61789 . + 0 ID=cds-MCP9537743.1;Parent=gene-NND05_09300;Dbxref=NCBI_GP:MCP9537743.1;Name=MCP9537743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846647.1;locus_tag=NND05_09300;product=hypothetical protein;protein_id=MCP9537743.1;transl_table=11 JANDXE010000017.1 Genbank gene 61935 62531 . + . ID=gene-NND05_09305;Name=NND05_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09305 JANDXE010000017.1 Protein Homology CDS 61935 62531 . + 0 ID=cds-MCP9537744.1;Parent=gene-NND05_09305;Dbxref=NCBI_GP:MCP9537744.1;Name=MCP9537744.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846648.1;locus_tag=NND05_09305;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9537744.1;transl_table=11 JANDXE010000017.1 Genbank gene 62609 63733 . + . ID=gene-NND05_09310;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NND05_09310 JANDXE010000017.1 Protein Homology CDS 62609 63733 . + 0 ID=cds-MCP9537745.1;Parent=gene-NND05_09310;Dbxref=NCBI_GP:MCP9537745.1;Name=MCP9537745.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412491.1;locus_tag=NND05_09310;product=chorismate synthase;protein_id=MCP9537745.1;transl_table=11 JANDXE010000017.1 Genbank gene 63827 64474 . - . ID=gene-NND05_09315;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NND05_09315 JANDXE010000017.1 Protein Homology CDS 63827 64474 . - 0 ID=cds-MCP9537746.1;Parent=gene-NND05_09315;Dbxref=NCBI_GP:MCP9537746.1;Name=MCP9537746.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013672185.1;locus_tag=NND05_09315;product=endonuclease III;protein_id=MCP9537746.1;transl_table=11 JANDXE010000017.1 Genbank gene 64504 65118 . - . ID=gene-NND05_09320;Name=NND05_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09320 JANDXE010000017.1 Protein Homology CDS 64504 65118 . - 0 ID=cds-MCP9537747.1;Parent=gene-NND05_09320;Dbxref=NCBI_GP:MCP9537747.1;Name=MCP9537747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345898.1;locus_tag=NND05_09320;product=OmpH family outer membrane protein;protein_id=MCP9537747.1;transl_table=11 JANDXE010000017.1 Genbank gene 65164 65358 . - . ID=gene-NND05_09325;Name=NND05_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09325 JANDXE010000017.1 Protein Homology CDS 65164 65358 . - 0 ID=cds-MCP9537748.1;Parent=gene-NND05_09325;Dbxref=NCBI_GP:MCP9537748.1;Name=MCP9537748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370977.1;locus_tag=NND05_09325;product=hypothetical protein;protein_id=MCP9537748.1;transl_table=11 JANDXE010000017.1 Genbank gene 65508 66965 . + . ID=gene-NND05_09330;Name=NND05_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09330 JANDXE010000017.1 Protein Homology CDS 65508 66965 . + 0 ID=cds-MCP9537749.1;Parent=gene-NND05_09330;Dbxref=NCBI_GP:MCP9537749.1;Name=MCP9537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265676.1;locus_tag=NND05_09330;product=aminoacyl-histidine dipeptidase;protein_id=MCP9537749.1;transl_table=11 JANDXE010000017.1 Genbank gene 67004 67387 . + . ID=gene-NND05_09335;Name=NND05_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09335 JANDXE010000017.1 GeneMarkS-2+ CDS 67004 67387 . + 0 ID=cds-MCP9537750.1;Parent=gene-NND05_09335;Dbxref=NCBI_GP:MCP9537750.1;Name=MCP9537750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09335;product=hypothetical protein;protein_id=MCP9537750.1;transl_table=11 JANDXE010000017.1 Genbank gene 67522 68067 . - . ID=gene-NND05_09340;Name=NND05_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09340 JANDXE010000017.1 Protein Homology CDS 67522 68067 . - 0 ID=cds-MCP9537751.1;Parent=gene-NND05_09340;Dbxref=NCBI_GP:MCP9537751.1;Name=MCP9537751.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412347.1;locus_tag=NND05_09340;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537751.1;transl_table=11 JANDXE010000017.1 Genbank gene 68273 70330 . - . ID=gene-NND05_09345;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NND05_09345 JANDXE010000017.1 Protein Homology CDS 68273 70330 . - 0 ID=cds-MCP9537752.1;Parent=gene-NND05_09345;Dbxref=NCBI_GP:MCP9537752.1;Name=MCP9537752.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341936.1;locus_tag=NND05_09345;product=molecular chaperone HtpG;protein_id=MCP9537752.1;transl_table=11 JANDXE010000017.1 Genbank gene 70605 71468 . - . ID=gene-NND05_09350;Name=NND05_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09350 JANDXE010000017.1 Protein Homology CDS 70605 71468 . - 0 ID=cds-MCP9537753.1;Parent=gene-NND05_09350;Dbxref=NCBI_GP:MCP9537753.1;Name=MCP9537753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846580.1;locus_tag=NND05_09350;product=DUF1460 domain-containing protein;protein_id=MCP9537753.1;transl_table=11 JANDXE010000017.1 Genbank gene 71465 72685 . - . ID=gene-NND05_09355;Name=NND05_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09355 JANDXE010000017.1 Protein Homology CDS 71465 72685 . - 0 ID=cds-MCP9537754.1;Parent=gene-NND05_09355;Dbxref=NCBI_GP:MCP9537754.1;Name=MCP9537754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846579.1;locus_tag=NND05_09355;product=DUF4421 domain-containing protein;protein_id=MCP9537754.1;transl_table=11 JANDXE010000017.1 Genbank gene 72705 73688 . - . ID=gene-NND05_09360;Name=NND05_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09360 JANDXE010000017.1 Protein Homology CDS 72705 73688 . - 0 ID=cds-MCP9537755.1;Parent=gene-NND05_09360;Dbxref=NCBI_GP:MCP9537755.1;Name=MCP9537755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341837.1;locus_tag=NND05_09360;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCP9537755.1;transl_table=11 JANDXE010000017.1 Genbank gene 73798 74403 . - . ID=gene-NND05_09365;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NND05_09365 JANDXE010000017.1 Protein Homology CDS 73798 74403 . - 0 ID=cds-MCP9537756.1;Parent=gene-NND05_09365;Dbxref=NCBI_GP:MCP9537756.1;Name=MCP9537756.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235675.1;locus_tag=NND05_09365;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=MCP9537756.1;transl_table=11 JANDXE010000017.1 Genbank gene 74491 76323 . - . ID=gene-NND05_09370;Name=NND05_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09370 JANDXE010000017.1 Protein Homology CDS 74491 76323 . - 0 ID=cds-MCP9537757.1;Parent=gene-NND05_09370;Dbxref=NCBI_GP:MCP9537757.1;Name=MCP9537757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412418.1;locus_tag=NND05_09370;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCP9537757.1;transl_table=11 JANDXE010000017.1 Genbank gene 76476 78560 . + . ID=gene-NND05_09375;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=NND05_09375 JANDXE010000017.1 Protein Homology CDS 76476 78560 . + 0 ID=cds-MCP9537758.1;Parent=gene-NND05_09375;Dbxref=NCBI_GP:MCP9537758.1;Name=MCP9537758.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004374132.1;locus_tag=NND05_09375;product=transcription termination factor Rho;protein_id=MCP9537758.1;transl_table=11 JANDXE010000017.1 Genbank gene 78883 79023 . + . ID=gene-NND05_09380;Name=NND05_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09380 JANDXE010000017.1 GeneMarkS-2+ CDS 78883 79023 . + 0 ID=cds-MCP9537759.1;Parent=gene-NND05_09380;Dbxref=NCBI_GP:MCP9537759.1;Name=MCP9537759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09380;product=hypothetical protein;protein_id=MCP9537759.1;transl_table=11 JANDXE010000017.1 Genbank gene 79125 81305 . - . ID=gene-NND05_09385;Name=NND05_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09385 JANDXE010000017.1 Protein Homology CDS 79125 81305 . - 0 ID=cds-MCP9537760.1;Parent=gene-NND05_09385;Dbxref=NCBI_GP:MCP9537760.1;Name=MCP9537760.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898486.1;locus_tag=NND05_09385;product=family 20 glycosylhydrolase;protein_id=MCP9537760.1;transl_table=11 JANDXE010000017.1 Genbank gene 81352 82671 . - . ID=gene-NND05_09390;Name=NND05_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09390 JANDXE010000017.1 Protein Homology CDS 81352 82671 . - 0 ID=cds-MCP9537761.1;Parent=gene-NND05_09390;Dbxref=NCBI_GP:MCP9537761.1;Name=MCP9537761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00765.1;locus_tag=NND05_09390;product=YihY/virulence factor BrkB family protein;protein_id=MCP9537761.1;transl_table=11 JANDXE010000017.1 Genbank gene 82776 84179 . - . ID=gene-NND05_09395;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=NND05_09395 JANDXE010000017.1 Protein Homology CDS 82776 84179 . - 0 ID=cds-MCP9537762.1;Parent=gene-NND05_09395;Dbxref=NCBI_GP:MCP9537762.1;Name=MCP9537762.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412061.1;locus_tag=NND05_09395;product=glucuronate isomerase;protein_id=MCP9537762.1;transl_table=11 JANDXE010000017.1 Genbank gene 84319 85206 . - . ID=gene-NND05_09400;Name=NND05_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09400 JANDXE010000017.1 Protein Homology CDS 84319 85206 . - 0 ID=cds-MCP9537763.1;Parent=gene-NND05_09400;Dbxref=NCBI_GP:MCP9537763.1;Name=MCP9537763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340618.1;locus_tag=NND05_09400;product=AraC family transcriptional regulator;protein_id=MCP9537763.1;transl_table=11 JANDXE010000017.1 Genbank gene 85296 86183 . - . ID=gene-NND05_09405;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NND05_09405 JANDXE010000017.1 Protein Homology CDS 85296 86183 . - 0 ID=cds-MCP9537764.1;Parent=gene-NND05_09405;Dbxref=NCBI_GP:MCP9537764.1;Name=MCP9537764.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412070.1;locus_tag=NND05_09405;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=MCP9537764.1;transl_table=11 JANDXE010000017.1 Genbank gene 86350 87132 . + . ID=gene-NND05_09410;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=NND05_09410 JANDXE010000017.1 Protein Homology CDS 86350 87132 . + 0 ID=cds-MCP9537765.1;Parent=gene-NND05_09410;Dbxref=NCBI_GP:MCP9537765.1;Name=MCP9537765.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846754.1;locus_tag=NND05_09410;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=MCP9537765.1;transl_table=11 JANDXE010000017.1 Genbank gene 87201 88118 . + . ID=gene-NND05_09415;Name=NND05_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09415 JANDXE010000017.1 Protein Homology CDS 87201 88118 . + 0 ID=cds-MCP9537766.1;Parent=gene-NND05_09415;Dbxref=NCBI_GP:MCP9537766.1;Name=MCP9537766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345837.1;locus_tag=NND05_09415;product=DMT family transporter;protein_id=MCP9537766.1;transl_table=11 ##sequence-region JANDXE010000018.1 1 84594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000018.1 Genbank region 1 84594 . + . ID=JANDXE010000018.1:1..84594;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000018.1 Genbank gene 345 1847 . + . ID=gene-NND05_09420;Name=NND05_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09420 JANDXE010000018.1 Protein Homology CDS 345 1847 . + 0 ID=cds-MCP9537767.1;Parent=gene-NND05_09420;Dbxref=NCBI_GP:MCP9537767.1;Name=MCP9537767.1;Note=Members of this family are fimbrial shaft proteins (major subunit proteins)%2C found in the Bacteriodetes. The family is named for Mfa1 from Porphyromonas gingivalis%2C and is related to but distinct from the family of FimA from the species.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038041.1;locus_tag=NND05_09420;product=Mfa1 family fimbria major subunit;protein_id=MCP9537767.1;transl_table=11 JANDXE010000018.1 Genbank gene 2140 3267 . + . ID=gene-NND05_09425;Name=NND05_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09425 JANDXE010000018.1 Protein Homology CDS 2140 3267 . + 0 ID=cds-MCP9537768.1;Parent=gene-NND05_09425;Dbxref=NCBI_GP:MCP9537768.1;Name=MCP9537768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020418.2;locus_tag=NND05_09425;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9537768.1;transl_table=11 JANDXE010000018.1 Genbank gene 3377 4576 . + . ID=gene-NND05_09430;Name=NND05_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09430 JANDXE010000018.1 GeneMarkS-2+ CDS 3377 4576 . + 0 ID=cds-MCP9537769.1;Parent=gene-NND05_09430;Dbxref=NCBI_GP:MCP9537769.1;Name=MCP9537769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09430;product=hypothetical protein;protein_id=MCP9537769.1;transl_table=11 JANDXE010000018.1 Genbank gene 4609 7401 . + . ID=gene-NND05_09435;Name=NND05_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09435 JANDXE010000018.1 Protein Homology CDS 4609 7401 . + 0 ID=cds-MCP9537770.1;Parent=gene-NND05_09435;Dbxref=NCBI_GP:MCP9537770.1;Name=MCP9537770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027574.2;locus_tag=NND05_09435;product=DUF4906 domain-containing protein;protein_id=MCP9537770.1;transl_table=11 JANDXE010000018.1 Genbank gene 8712 9971 . - . ID=gene-NND05_09440;Name=NND05_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09440 JANDXE010000018.1 Protein Homology CDS 8712 9971 . - 0 ID=cds-MCP9537771.1;Parent=gene-NND05_09440;Dbxref=NCBI_GP:MCP9537771.1;Name=MCP9537771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613512.1;locus_tag=NND05_09440;product=ATP-binding protein;protein_id=MCP9537771.1;transl_table=11 JANDXE010000018.1 Genbank gene 10247 10423 . + . ID=gene-NND05_09445;Name=NND05_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09445 JANDXE010000018.1 GeneMarkS-2+ CDS 10247 10423 . + 0 ID=cds-MCP9537772.1;Parent=gene-NND05_09445;Dbxref=NCBI_GP:MCP9537772.1;Name=MCP9537772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09445;product=hypothetical protein;protein_id=MCP9537772.1;transl_table=11 JANDXE010000018.1 Genbank gene 10865 12622 . + . ID=gene-NND05_09450;Name=NND05_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09450 JANDXE010000018.1 Protein Homology CDS 10865 12622 . + 0 ID=cds-MCP9537773.1;Parent=gene-NND05_09450;Dbxref=NCBI_GP:MCP9537773.1;Name=MCP9537773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008997293.1;locus_tag=NND05_09450;product=ATP-binding protein;protein_id=MCP9537773.1;transl_table=11 JANDXE010000018.1 Genbank gene 12668 13471 . + . ID=gene-NND05_09455;Name=NND05_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09455 JANDXE010000018.1 Protein Homology CDS 12668 13471 . + 0 ID=cds-MCP9537774.1;Parent=gene-NND05_09455;Dbxref=NCBI_GP:MCP9537774.1;Name=MCP9537774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028437.2;locus_tag=NND05_09455;product=DUF5106 domain-containing protein;protein_id=MCP9537774.1;transl_table=11 JANDXE010000018.1 Genbank gene 13641 14129 . - . ID=gene-NND05_09460;Name=NND05_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09460 JANDXE010000018.1 GeneMarkS-2+ CDS 13641 14129 . - 0 ID=cds-MCP9537775.1;Parent=gene-NND05_09460;Dbxref=NCBI_GP:MCP9537775.1;Name=MCP9537775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09460;product=hypothetical protein;protein_id=MCP9537775.1;transl_table=11 JANDXE010000018.1 Genbank gene 14505 15518 . - . ID=gene-NND05_09465;Name=NND05_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09465 JANDXE010000018.1 Protein Homology CDS 14505 15518 . - 0 ID=cds-MCP9537776.1;Parent=gene-NND05_09465;Dbxref=NCBI_GP:MCP9537776.1;Name=MCP9537776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364573.1;locus_tag=NND05_09465;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=MCP9537776.1;transl_table=11 JANDXE010000018.1 Genbank gene 15707 16933 . - . ID=gene-NND05_09470;Name=NND05_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09470 JANDXE010000018.1 Protein Homology CDS 15707 16933 . - 0 ID=cds-MCP9537777.1;Parent=gene-NND05_09470;Dbxref=NCBI_GP:MCP9537777.1;Name=MCP9537777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848805.1;locus_tag=NND05_09470;product=sugar MFS transporter;protein_id=MCP9537777.1;transl_table=11 JANDXE010000018.1 Genbank gene 16998 20039 . - . ID=gene-NND05_09475;Name=NND05_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09475 JANDXE010000018.1 Protein Homology CDS 16998 20039 . - 0 ID=cds-MCP9537778.1;Parent=gene-NND05_09475;Dbxref=NCBI_GP:MCP9537778.1;Name=MCP9537778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341763.1;locus_tag=NND05_09475;product=phosphoenolpyruvate synthase;protein_id=MCP9537778.1;transl_table=11 JANDXE010000018.1 Genbank gene 20139 20720 . + . ID=gene-NND05_09480;Name=NND05_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09480 JANDXE010000018.1 Protein Homology CDS 20139 20720 . + 0 ID=cds-MCP9537779.1;Parent=gene-NND05_09480;Dbxref=NCBI_GP:MCP9537779.1;Name=MCP9537779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371760.1;locus_tag=NND05_09480;product=septal ring lytic transglycosylase RlpA family protein;protein_id=MCP9537779.1;transl_table=11 JANDXE010000018.1 Genbank gene 20939 21745 . - . ID=gene-NND05_09485;Name=NND05_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09485 JANDXE010000018.1 Protein Homology CDS 20939 21745 . - 0 ID=cds-MCP9537780.1;Parent=gene-NND05_09485;Dbxref=NCBI_GP:MCP9537780.1;Name=MCP9537780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412218.1;locus_tag=NND05_09485;product=hypothetical protein;protein_id=MCP9537780.1;transl_table=11 JANDXE010000018.1 Genbank gene 21898 22383 . - . ID=gene-NND05_09490;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NND05_09490 JANDXE010000018.1 Protein Homology CDS 21898 22383 . - 0 ID=cds-MCP9537781.1;Parent=gene-NND05_09490;Dbxref=NCBI_GP:MCP9537781.1;Name=MCP9537781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376957.1;locus_tag=NND05_09490;product=50S ribosomal protein L17;protein_id=MCP9537781.1;transl_table=11 JANDXE010000018.1 Genbank gene 22417 23412 . - . ID=gene-NND05_09495;Name=NND05_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09495 JANDXE010000018.1 Protein Homology CDS 22417 23412 . - 0 ID=cds-MCP9537782.1;Parent=gene-NND05_09495;Dbxref=NCBI_GP:MCP9537782.1;Name=MCP9537782.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848810.1;locus_tag=NND05_09495;product=DNA-directed RNA polymerase subunit alpha;protein_id=MCP9537782.1;transl_table=11 JANDXE010000018.1 Genbank gene 23425 24030 . - . ID=gene-NND05_09500;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NND05_09500 JANDXE010000018.1 Protein Homology CDS 23425 24030 . - 0 ID=cds-MCP9537783.1;Parent=gene-NND05_09500;Dbxref=NCBI_GP:MCP9537783.1;Name=MCP9537783.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667875.1;locus_tag=NND05_09500;product=30S ribosomal protein S4;protein_id=MCP9537783.1;transl_table=11 JANDXE010000018.1 Genbank gene 24073 24462 . - . ID=gene-NND05_09505;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NND05_09505 JANDXE010000018.1 Protein Homology CDS 24073 24462 . - 0 ID=cds-MCP9537784.1;Parent=gene-NND05_09505;Dbxref=NCBI_GP:MCP9537784.1;Name=MCP9537784.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634781.1;locus_tag=NND05_09505;product=30S ribosomal protein S11;protein_id=MCP9537784.1;transl_table=11 JANDXE010000018.1 Genbank gene 24483 24863 . - . ID=gene-NND05_09510;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NND05_09510 JANDXE010000018.1 Protein Homology CDS 24483 24863 . - 0 ID=cds-MCP9537785.1;Parent=gene-NND05_09510;Dbxref=NCBI_GP:MCP9537785.1;Name=MCP9537785.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1;locus_tag=NND05_09510;product=30S ribosomal protein S13;protein_id=MCP9537785.1;transl_table=11 JANDXE010000018.1 Genbank gene 24962 25078 . - . ID=gene-NND05_09515;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=NND05_09515 JANDXE010000018.1 Protein Homology CDS 24962 25078 . - 0 ID=cds-MCP9537786.1;Parent=gene-NND05_09515;Dbxref=NCBI_GP:MCP9537786.1;Name=MCP9537786.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmJ;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=NND05_09515;product=50S ribosomal protein L36;protein_id=MCP9537786.1;transl_table=11 JANDXE010000018.1 Genbank gene 25096 25314 . - . ID=gene-NND05_09520;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NND05_09520 JANDXE010000018.1 Protein Homology CDS 25096 25314 . - 0 ID=cds-MCP9537787.1;Parent=gene-NND05_09520;Dbxref=NCBI_GP:MCP9537787.1;Name=MCP9537787.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=NND05_09520;product=translation initiation factor IF-1;protein_id=MCP9537787.1;transl_table=11 JANDXE010000018.1 Genbank gene 25317 26117 . - . ID=gene-NND05_09525;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NND05_09525 JANDXE010000018.1 Protein Homology CDS 25317 26117 . - 0 ID=cds-MCP9537788.1;Parent=gene-NND05_09525;Dbxref=NCBI_GP:MCP9537788.1;Name=MCP9537788.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671038.1;locus_tag=NND05_09525;product=type I methionyl aminopeptidase;protein_id=MCP9537788.1;transl_table=11 JANDXE010000018.1 Genbank gene 26133 27470 . - . ID=gene-NND05_09530;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NND05_09530 JANDXE010000018.1 Protein Homology CDS 26133 27470 . - 0 ID=cds-MCP9537789.1;Parent=gene-NND05_09530;Dbxref=NCBI_GP:MCP9537789.1;Name=MCP9537789.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371769.1;locus_tag=NND05_09530;product=preprotein translocase subunit SecY;protein_id=MCP9537789.1;transl_table=11 JANDXE010000018.1 Genbank gene 27474 27920 . - . ID=gene-NND05_09535;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NND05_09535 JANDXE010000018.1 Protein Homology CDS 27474 27920 . - 0 ID=cds-MCP9537790.1;Parent=gene-NND05_09535;Dbxref=NCBI_GP:MCP9537790.1;Name=MCP9537790.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362986.1;locus_tag=NND05_09535;product=50S ribosomal protein L15;protein_id=MCP9537790.1;transl_table=11 JANDXE010000018.1 Genbank gene 27947 28123 . - . ID=gene-NND05_09540;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NND05_09540 JANDXE010000018.1 Protein Homology CDS 27947 28123 . - 0 ID=cds-MCP9537791.1;Parent=gene-NND05_09540;Dbxref=NCBI_GP:MCP9537791.1;Name=MCP9537791.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237634.1;locus_tag=NND05_09540;product=50S ribosomal protein L30;protein_id=MCP9537791.1;transl_table=11 JANDXE010000018.1 Genbank gene 28140 28652 . - . ID=gene-NND05_09545;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NND05_09545 JANDXE010000018.1 Protein Homology CDS 28140 28652 . - 0 ID=cds-MCP9537792.1;Parent=gene-NND05_09545;Dbxref=NCBI_GP:MCP9537792.1;Name=MCP9537792.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361622.1;locus_tag=NND05_09545;product=30S ribosomal protein S5;protein_id=MCP9537792.1;transl_table=11 JANDXE010000018.1 Genbank gene 28659 29003 . - . ID=gene-NND05_09550;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NND05_09550 JANDXE010000018.1 Protein Homology CDS 28659 29003 . - 0 ID=cds-MCP9537793.1;Parent=gene-NND05_09550;Dbxref=NCBI_GP:MCP9537793.1;Name=MCP9537793.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380845.1;locus_tag=NND05_09550;product=50S ribosomal protein L18;protein_id=MCP9537793.1;transl_table=11 JANDXE010000018.1 Genbank gene 29022 29594 . - . ID=gene-NND05_09555;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NND05_09555 JANDXE010000018.1 Protein Homology CDS 29022 29594 . - 0 ID=cds-MCP9537794.1;Parent=gene-NND05_09555;Dbxref=NCBI_GP:MCP9537794.1;Name=MCP9537794.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967029.1;locus_tag=NND05_09555;product=50S ribosomal protein L6;protein_id=MCP9537794.1;transl_table=11 JANDXE010000018.1 Genbank gene 29609 30004 . - . ID=gene-NND05_09560;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NND05_09560 JANDXE010000018.1 Protein Homology CDS 29609 30004 . - 0 ID=cds-MCP9537795.1;Parent=gene-NND05_09560;Dbxref=NCBI_GP:MCP9537795.1;Name=MCP9537795.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782213.1;locus_tag=NND05_09560;product=30S ribosomal protein S8;protein_id=MCP9537795.1;transl_table=11 JANDXE010000018.1 Genbank gene 30078 30380 . - . ID=gene-NND05_09565;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NND05_09565 JANDXE010000018.1 Protein Homology CDS 30078 30380 . - 0 ID=cds-MCP9537796.1;Parent=gene-NND05_09565;Dbxref=NCBI_GP:MCP9537796.1;Name=MCP9537796.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844123.1;locus_tag=NND05_09565;product=30S ribosomal protein S14;protein_id=MCP9537796.1;transl_table=11 JANDXE010000018.1 Genbank gene 30386 30940 . - . ID=gene-NND05_09570;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NND05_09570 JANDXE010000018.1 Protein Homology CDS 30386 30940 . - 0 ID=cds-MCP9537797.1;Parent=gene-NND05_09570;Dbxref=NCBI_GP:MCP9537797.1;Name=MCP9537797.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019035880.1;locus_tag=NND05_09570;product=50S ribosomal protein L5;protein_id=MCP9537797.1;transl_table=11 JANDXE010000018.1 Genbank gene 30940 31257 . - . ID=gene-NND05_09575;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NND05_09575 JANDXE010000018.1 Protein Homology CDS 30940 31257 . - 0 ID=cds-MCP9537798.1;Parent=gene-NND05_09575;Dbxref=NCBI_GP:MCP9537798.1;Name=MCP9537798.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007572449.1;locus_tag=NND05_09575;product=50S ribosomal protein L24;protein_id=MCP9537798.1;transl_table=11 JANDXE010000018.1 Genbank gene 31278 31643 . - . ID=gene-NND05_09580;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NND05_09580 JANDXE010000018.1 Protein Homology CDS 31278 31643 . - 0 ID=cds-MCP9537799.1;Parent=gene-NND05_09580;Dbxref=NCBI_GP:MCP9537799.1;Name=MCP9537799.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=NND05_09580;product=50S ribosomal protein L14;protein_id=MCP9537799.1;transl_table=11 JANDXE010000018.1 Genbank gene 31646 31903 . - . ID=gene-NND05_09585;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NND05_09585 JANDXE010000018.1 Protein Homology CDS 31646 31903 . - 0 ID=cds-MCP9537800.1;Parent=gene-NND05_09585;Dbxref=NCBI_GP:MCP9537800.1;Name=MCP9537800.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362991.1;locus_tag=NND05_09585;product=30S ribosomal protein S17;protein_id=MCP9537800.1;transl_table=11 JANDXE010000018.1 Genbank gene 31915 32109 . - . ID=gene-NND05_09590;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NND05_09590 JANDXE010000018.1 Protein Homology CDS 31915 32109 . - 0 ID=cds-MCP9537801.1;Parent=gene-NND05_09590;Dbxref=NCBI_GP:MCP9537801.1;Name=MCP9537801.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004335798.1;locus_tag=NND05_09590;product=50S ribosomal protein L29;protein_id=MCP9537801.1;transl_table=11 JANDXE010000018.1 Genbank gene 32112 32540 . - . ID=gene-NND05_09595;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NND05_09595 JANDXE010000018.1 Protein Homology CDS 32112 32540 . - 0 ID=cds-MCP9537802.1;Parent=gene-NND05_09595;Dbxref=NCBI_GP:MCP9537802.1;Name=MCP9537802.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709541.1;locus_tag=NND05_09595;product=50S ribosomal protein L16;protein_id=MCP9537802.1;transl_table=11 JANDXE010000018.1 Genbank gene 32557 33288 . - . ID=gene-NND05_09600;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=NND05_09600 JANDXE010000018.1 Protein Homology CDS 32557 33288 . - 0 ID=cds-MCP9537803.1;Parent=gene-NND05_09600;Dbxref=NCBI_GP:MCP9537803.1;Name=MCP9537803.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006045604.1;locus_tag=NND05_09600;product=30S ribosomal protein S3;protein_id=MCP9537803.1;transl_table=11 JANDXE010000018.1 Genbank gene 33298 33702 . - . ID=gene-NND05_09605;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NND05_09605 JANDXE010000018.1 Protein Homology CDS 33298 33702 . - 0 ID=cds-MCP9537804.1;Parent=gene-NND05_09605;Dbxref=NCBI_GP:MCP9537804.1;Name=MCP9537804.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371784.1;locus_tag=NND05_09605;product=50S ribosomal protein L22;protein_id=MCP9537804.1;transl_table=11 JANDXE010000018.1 Genbank gene 33739 34005 . - . ID=gene-NND05_09610;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NND05_09610 JANDXE010000018.1 Protein Homology CDS 33739 34005 . - 0 ID=cds-MCP9537805.1;Parent=gene-NND05_09610;Dbxref=NCBI_GP:MCP9537805.1;Name=MCP9537805.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008124671.1;locus_tag=NND05_09610;product=30S ribosomal protein S19;protein_id=MCP9537805.1;transl_table=11 JANDXE010000018.1 Genbank gene 34016 34843 . - . ID=gene-NND05_09615;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NND05_09615 JANDXE010000018.1 Protein Homology CDS 34016 34843 . - 0 ID=cds-MCP9537806.1;Parent=gene-NND05_09615;Dbxref=NCBI_GP:MCP9537806.1;Name=MCP9537806.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008448275.1;locus_tag=NND05_09615;product=50S ribosomal protein L2;protein_id=MCP9537806.1;transl_table=11 JANDXE010000018.1 Genbank gene 34852 35145 . - . ID=gene-NND05_09620;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NND05_09620 JANDXE010000018.1 Protein Homology CDS 34852 35145 . - 0 ID=cds-MCP9537807.1;Parent=gene-NND05_09620;Dbxref=NCBI_GP:MCP9537807.1;Name=MCP9537807.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013546675.1;locus_tag=NND05_09620;product=50S ribosomal protein L23;protein_id=MCP9537807.1;transl_table=11 JANDXE010000018.1 Genbank gene 35163 35792 . - . ID=gene-NND05_09625;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NND05_09625 JANDXE010000018.1 Protein Homology CDS 35163 35792 . - 0 ID=cds-MCP9537808.1;Parent=gene-NND05_09625;Dbxref=NCBI_GP:MCP9537808.1;Name=MCP9537808.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565605.1;locus_tag=NND05_09625;product=50S ribosomal protein L4;protein_id=MCP9537808.1;transl_table=11 JANDXE010000018.1 Genbank gene 35792 36406 . - . ID=gene-NND05_09630;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NND05_09630 JANDXE010000018.1 Protein Homology CDS 35792 36406 . - 0 ID=cds-MCP9537809.1;Parent=gene-NND05_09630;Dbxref=NCBI_GP:MCP9537809.1;Name=MCP9537809.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341797.1;locus_tag=NND05_09630;product=50S ribosomal protein L3;protein_id=MCP9537809.1;transl_table=11 JANDXE010000018.1 Genbank gene 36427 36732 . - . ID=gene-NND05_09635;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NND05_09635 JANDXE010000018.1 Protein Homology CDS 36427 36732 . - 0 ID=cds-MCP9537810.1;Parent=gene-NND05_09635;Dbxref=NCBI_GP:MCP9537810.1;Name=MCP9537810.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782187.1;locus_tag=NND05_09635;product=30S ribosomal protein S10;protein_id=MCP9537810.1;transl_table=11 JANDXE010000018.1 Genbank gene 36849 38963 . - . ID=gene-NND05_09640;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NND05_09640 JANDXE010000018.1 Protein Homology CDS 36849 38963 . - 0 ID=cds-MCP9537811.1;Parent=gene-NND05_09640;Dbxref=NCBI_GP:MCP9537811.1;Name=MCP9537811.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967037.1;locus_tag=NND05_09640;product=elongation factor G;protein_id=MCP9537811.1;transl_table=11 JANDXE010000018.1 Genbank gene 38993 39469 . - . ID=gene-NND05_09645;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NND05_09645 JANDXE010000018.1 Protein Homology CDS 38993 39469 . - 0 ID=cds-MCP9537812.1;Parent=gene-NND05_09645;Dbxref=NCBI_GP:MCP9537812.1;Name=MCP9537812.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362998.1;locus_tag=NND05_09645;product=30S ribosomal protein S7;protein_id=MCP9537812.1;transl_table=11 JANDXE010000018.1 Genbank gene 39656 40036 . - . ID=gene-NND05_09650;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NND05_09650 JANDXE010000018.1 Protein Homology CDS 39656 40036 . - 0 ID=cds-MCP9537813.1;Parent=gene-NND05_09650;Dbxref=NCBI_GP:MCP9537813.1;Name=MCP9537813.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009161022.1;locus_tag=NND05_09650;product=30S ribosomal protein S12;protein_id=MCP9537813.1;transl_table=11 JANDXE010000018.1 Genbank gene 40278 40604 . - . ID=gene-NND05_09655;Name=NND05_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09655 JANDXE010000018.1 Protein Homology CDS 40278 40604 . - 0 ID=cds-MCP9537814.1;Parent=gene-NND05_09655;Dbxref=NCBI_GP:MCP9537814.1;Name=MCP9537814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848840.1;locus_tag=NND05_09655;product=DUF3467 domain-containing protein;protein_id=MCP9537814.1;transl_table=11 JANDXE010000018.1 Genbank gene 40802 43348 . - . ID=gene-NND05_09660;Name=NND05_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09660 JANDXE010000018.1 Protein Homology CDS 40802 43348 . - 0 ID=cds-MCP9537815.1;Parent=gene-NND05_09660;Dbxref=NCBI_GP:MCP9537815.1;Name=MCP9537815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_09660;product=outer membrane beta-barrel protein;protein_id=MCP9537815.1;transl_table=11 JANDXE010000018.1 Genbank gene 43417 44058 . - . ID=gene-NND05_09665;Name=NND05_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09665 JANDXE010000018.1 Protein Homology CDS 43417 44058 . - 0 ID=cds-MCP9537816.1;Parent=gene-NND05_09665;Dbxref=NCBI_GP:MCP9537816.1;Name=MCP9537816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027664.2;locus_tag=NND05_09665;product=DUF4974 domain-containing protein;protein_id=MCP9537816.1;transl_table=11 JANDXE010000018.1 Genbank gene 44051 44566 . - . ID=gene-NND05_09670;Name=NND05_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09670 JANDXE010000018.1 Protein Homology CDS 44051 44566 . - 0 ID=cds-MCP9537817.1;Parent=gene-NND05_09670;Dbxref=NCBI_GP:MCP9537817.1;Name=MCP9537817.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=NND05_09670;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9537817.1;transl_table=11 JANDXE010000018.1 Genbank gene 44760 49094 . - . ID=gene-NND05_09675;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=NND05_09675 JANDXE010000018.1 Protein Homology CDS 44760 49094 . - 0 ID=cds-MCP9537818.1;Parent=gene-NND05_09675;Dbxref=NCBI_GP:MCP9537818.1;Name=MCP9537818.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410480.1;locus_tag=NND05_09675;product=DNA-directed RNA polymerase subunit beta';protein_id=MCP9537818.1;transl_table=11 JANDXE010000018.1 Genbank gene 49126 52938 . - . ID=gene-NND05_09680;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NND05_09680 JANDXE010000018.1 Protein Homology CDS 49126 52938 . - 0 ID=cds-MCP9537819.1;Parent=gene-NND05_09680;Dbxref=NCBI_GP:MCP9537819.1;Name=MCP9537819.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237585.1;locus_tag=NND05_09680;product=DNA-directed RNA polymerase subunit beta;protein_id=MCP9537819.1;transl_table=11 JANDXE010000018.1 Genbank gene 53051 53428 . - . ID=gene-NND05_09685;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NND05_09685 JANDXE010000018.1 Protein Homology CDS 53051 53428 . - 0 ID=cds-MCP9537820.1;Parent=gene-NND05_09685;Dbxref=NCBI_GP:MCP9537820.1;Name=MCP9537820.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558082.1;locus_tag=NND05_09685;product=50S ribosomal protein L7/L12;protein_id=MCP9537820.1;transl_table=11 JANDXE010000018.1 Genbank gene 53481 53999 . - . ID=gene-NND05_09690;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NND05_09690 JANDXE010000018.1 Protein Homology CDS 53481 53999 . - 0 ID=cds-MCP9537821.1;Parent=gene-NND05_09690;Dbxref=NCBI_GP:MCP9537821.1;Name=MCP9537821.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380793.1;locus_tag=NND05_09690;product=50S ribosomal protein L10;protein_id=MCP9537821.1;transl_table=11 JANDXE010000018.1 Genbank gene 54018 54710 . - . ID=gene-NND05_09695;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NND05_09695 JANDXE010000018.1 Protein Homology CDS 54018 54710 . - 0 ID=cds-MCP9537822.1;Parent=gene-NND05_09695;Dbxref=NCBI_GP:MCP9537822.1;Name=MCP9537822.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844200.1;locus_tag=NND05_09695;product=50S ribosomal protein L1;protein_id=MCP9537822.1;transl_table=11 JANDXE010000018.1 Genbank gene 54732 55172 . - . ID=gene-NND05_09700;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NND05_09700 JANDXE010000018.1 Protein Homology CDS 54732 55172 . - 0 ID=cds-MCP9537823.1;Parent=gene-NND05_09700;Dbxref=NCBI_GP:MCP9537823.1;Name=MCP9537823.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351875.1;locus_tag=NND05_09700;product=50S ribosomal protein L11;protein_id=MCP9537823.1;transl_table=11 JANDXE010000018.1 Genbank gene 55234 55776 . - . ID=gene-NND05_09705;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NND05_09705 JANDXE010000018.1 Protein Homology CDS 55234 55776 . - 0 ID=cds-MCP9537824.1;Parent=gene-NND05_09705;Dbxref=NCBI_GP:MCP9537824.1;Name=MCP9537824.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848847.1;locus_tag=NND05_09705;product=transcription termination/antitermination protein NusG;protein_id=MCP9537824.1;transl_table=11 JANDXE010000018.1 Genbank gene 55789 55977 . - . ID=gene-NND05_09710;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NND05_09710 JANDXE010000018.1 Protein Homology CDS 55789 55977 . - 0 ID=cds-MCP9537825.1;Parent=gene-NND05_09710;Dbxref=NCBI_GP:MCP9537825.1;Name=MCP9537825.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secE;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342454.1;locus_tag=NND05_09710;product=preprotein translocase subunit SecE;protein_id=MCP9537825.1;transl_table=11 JANDXE010000018.1 Genbank gene 55994 56066 . - . ID=gene-NND05_09715;Name=NND05_09715;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09715 JANDXE010000018.1 tRNAscan-SE tRNA 55994 56066 . - . ID=rna-NND05_09715;Parent=gene-NND05_09715;anticodon=(pos:complement(56031..56033));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09715;product=tRNA-Trp JANDXE010000018.1 tRNAscan-SE exon 55994 56066 . - . ID=exon-NND05_09715-1;Parent=rna-NND05_09715;anticodon=(pos:complement(56031..56033));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09715;product=tRNA-Trp JANDXE010000018.1 Genbank gene 56128 57324 . - . ID=gene-NND05_09720;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NND05_09720 JANDXE010000018.1 Protein Homology CDS 56128 57324 . - 0 ID=cds-MCP9537826.1;Parent=gene-NND05_09720;Dbxref=NCBI_GP:MCP9537826.1;Name=MCP9537826.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671024.1;locus_tag=NND05_09720;product=elongation factor Tu;protein_id=MCP9537826.1;transl_table=11 JANDXE010000018.1 Genbank gene 57414 57485 . - . ID=gene-NND05_09725;Name=NND05_09725;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09725 JANDXE010000018.1 tRNAscan-SE tRNA 57414 57485 . - . ID=rna-NND05_09725;Parent=gene-NND05_09725;anticodon=(pos:complement(57451..57453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09725;product=tRNA-Thr JANDXE010000018.1 tRNAscan-SE exon 57414 57485 . - . ID=exon-NND05_09725-1;Parent=rna-NND05_09725;anticodon=(pos:complement(57451..57453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09725;product=tRNA-Thr JANDXE010000018.1 Genbank gene 57498 57570 . - . ID=gene-NND05_09730;Name=NND05_09730;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09730 JANDXE010000018.1 tRNAscan-SE tRNA 57498 57570 . - . ID=rna-NND05_09730;Parent=gene-NND05_09730;anticodon=(pos:complement(57535..57537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09730;product=tRNA-Gly JANDXE010000018.1 tRNAscan-SE exon 57498 57570 . - . ID=exon-NND05_09730-1;Parent=rna-NND05_09730;anticodon=(pos:complement(57535..57537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09730;product=tRNA-Gly JANDXE010000018.1 Genbank gene 57584 57665 . - . ID=gene-NND05_09735;Name=NND05_09735;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09735 JANDXE010000018.1 tRNAscan-SE tRNA 57584 57665 . - . ID=rna-NND05_09735;Parent=gene-NND05_09735;anticodon=(pos:complement(57629..57631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09735;product=tRNA-Tyr JANDXE010000018.1 tRNAscan-SE exon 57584 57665 . - . ID=exon-NND05_09735-1;Parent=rna-NND05_09735;anticodon=(pos:complement(57629..57631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09735;product=tRNA-Tyr JANDXE010000018.1 Genbank gene 57684 57757 . - . ID=gene-NND05_09740;Name=NND05_09740;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_09740 JANDXE010000018.1 tRNAscan-SE tRNA 57684 57757 . - . ID=rna-NND05_09740;Parent=gene-NND05_09740;anticodon=(pos:complement(57721..57723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09740;product=tRNA-Thr JANDXE010000018.1 tRNAscan-SE exon 57684 57757 . - . ID=exon-NND05_09740-1;Parent=rna-NND05_09740;anticodon=(pos:complement(57721..57723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_09740;product=tRNA-Thr JANDXE010000018.1 Genbank gene 57858 58157 . - . ID=gene-NND05_09745;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=NND05_09745 JANDXE010000018.1 Protein Homology CDS 57858 58157 . - 0 ID=cds-MCP9537827.1;Parent=gene-NND05_09745;Dbxref=NCBI_GP:MCP9537827.1;Name=MCP9537827.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344139.1;locus_tag=NND05_09745;product=ribosome-associated translation inhibitor RaiA;protein_id=MCP9537827.1;transl_table=11 JANDXE010000018.1 Genbank gene 58181 59065 . - . ID=gene-NND05_09750;Name=NND05_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09750 JANDXE010000018.1 Protein Homology CDS 58181 59065 . - 0 ID=cds-MCP9537828.1;Parent=gene-NND05_09750;Dbxref=NCBI_GP:MCP9537828.1;Name=MCP9537828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264165.1;locus_tag=NND05_09750;product=tyrosine recombinase XerC;protein_id=MCP9537828.1;transl_table=11 JANDXE010000018.1 Genbank gene 59214 59405 . - . ID=gene-NND05_09755;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NND05_09755 JANDXE010000018.1 Protein Homology CDS 59214 59405 . - 0 ID=cds-MCP9537829.1;Parent=gene-NND05_09755;Dbxref=NCBI_GP:MCP9537829.1;Name=MCP9537829.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134585.1;locus_tag=NND05_09755;product=30S ribosomal protein S21;protein_id=MCP9537829.1;transl_table=11 JANDXE010000018.1 Genbank gene 59544 61331 . - . ID=gene-NND05_09760;Name=NND05_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09760 JANDXE010000018.1 Protein Homology CDS 59544 61331 . - 0 ID=cds-MCP9537830.1;Parent=gene-NND05_09760;Dbxref=NCBI_GP:MCP9537830.1;Name=MCP9537830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848853.1;locus_tag=NND05_09760;product=aminopeptidase P family protein;protein_id=MCP9537830.1;transl_table=11 JANDXE010000018.1 Genbank gene 61637 62629 . + . ID=gene-NND05_09765;Name=NND05_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09765 JANDXE010000018.1 Protein Homology CDS 61637 62629 . + 0 ID=cds-MCP9537831.1;Parent=gene-NND05_09765;Dbxref=NCBI_GP:MCP9537831.1;Name=MCP9537831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342460.1;locus_tag=NND05_09765;product=malate dehydrogenase;protein_id=MCP9537831.1;transl_table=11 JANDXE010000018.1 Genbank gene 62852 63706 . + . ID=gene-NND05_09770;Name=NND05_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09770 JANDXE010000018.1 Protein Homology CDS 62852 63706 . + 0 ID=cds-MCP9537832.1;Parent=gene-NND05_09770;Dbxref=NCBI_GP:MCP9537832.1;Name=MCP9537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373974.1;locus_tag=NND05_09770;product=DUF3737 family protein;protein_id=MCP9537832.1;transl_table=11 JANDXE010000018.1 Genbank gene 63947 65149 . + . ID=gene-NND05_09775;Name=NND05_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09775 JANDXE010000018.1 Protein Homology CDS 63947 65149 . + 0 ID=cds-MCP9537833.1;Parent=gene-NND05_09775;Dbxref=NCBI_GP:MCP9537833.1;Name=MCP9537833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848856.1;locus_tag=NND05_09775;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCP9537833.1;transl_table=11 JANDXE010000018.1 Genbank gene 65203 65727 . + . ID=gene-NND05_09780;Name=NND05_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09780 JANDXE010000018.1 Protein Homology CDS 65203 65727 . + 0 ID=cds-MCP9537834.1;Parent=gene-NND05_09780;Dbxref=NCBI_GP:MCP9537834.1;Name=MCP9537834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848857.1;locus_tag=NND05_09780;product=nitroreductase;protein_id=MCP9537834.1;transl_table=11 JANDXE010000018.1 Genbank gene 65827 67098 . - . ID=gene-NND05_09785;Name=NND05_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09785 JANDXE010000018.1 Protein Homology CDS 65827 67098 . - 0 ID=cds-MCP9537835.1;Parent=gene-NND05_09785;Dbxref=NCBI_GP:MCP9537835.1;Name=MCP9537835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344156.1;locus_tag=NND05_09785;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=MCP9537835.1;transl_table=11 JANDXE010000018.1 Genbank gene 67200 68717 . - . ID=gene-NND05_09790;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NND05_09790 JANDXE010000018.1 Protein Homology CDS 67200 68717 . - 0 ID=cds-MCP9537836.1;Parent=gene-NND05_09790;Dbxref=NCBI_GP:MCP9537836.1;Name=MCP9537836.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911374.1;locus_tag=NND05_09790;product=glutamate--tRNA ligase;protein_id=MCP9537836.1;transl_table=11 JANDXE010000018.1 Genbank gene 68908 71025 . + . ID=gene-NND05_09795;Name=NND05_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09795 JANDXE010000018.1 Protein Homology CDS 68908 71025 . + 0 ID=cds-MCP9537837.1;Parent=gene-NND05_09795;Dbxref=NCBI_GP:MCP9537837.1;Name=MCP9537837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380628.1;locus_tag=NND05_09795;product=HDIG domain-containing protein;protein_id=MCP9537837.1;transl_table=11 JANDXE010000018.1 Genbank gene 71219 72772 . + . ID=gene-NND05_09800;Name=NND05_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09800 JANDXE010000018.1 Protein Homology CDS 71219 72772 . + 0 ID=cds-MCP9537838.1;Parent=gene-NND05_09800;Dbxref=NCBI_GP:MCP9537838.1;Name=MCP9537838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848861.1;locus_tag=NND05_09800;product=hypothetical protein;protein_id=MCP9537838.1;transl_table=11 JANDXE010000018.1 Genbank gene 72856 75129 . - . ID=gene-NND05_09805;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=NND05_09805 JANDXE010000018.1 Protein Homology CDS 72856 75129 . - 0 ID=cds-MCP9537839.1;Parent=gene-NND05_09805;Dbxref=NCBI_GP:MCP9537839.1;Name=MCP9537839.1;Ontology_term=GO:0006260,GO:0003678,GO:0003688,GO:0016818,GO:0005658;gbkey=CDS;gene=priA;go_component=alpha DNA polymerase:primase complex|0005658||IEA;go_function=DNA helicase activity|0003678||IEA,DNA replication origin binding|0003688||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369493.1;locus_tag=NND05_09805;product=primosomal protein N';protein_id=MCP9537839.1;transl_table=11 JANDXE010000018.1 Genbank gene 75302 75937 . - . ID=gene-NND05_09810;Name=NND05_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09810 JANDXE010000018.1 Protein Homology CDS 75302 75937 . - 0 ID=cds-MCP9537840.1;Parent=gene-NND05_09810;Dbxref=NCBI_GP:MCP9537840.1;Name=MCP9537840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366677.1;locus_tag=NND05_09810;product=porin family protein;protein_id=MCP9537840.1;transl_table=11 JANDXE010000018.1 Genbank gene 76009 77073 . - . ID=gene-NND05_09815;Name=gldN;gbkey=Gene;gene=gldN;gene_biotype=protein_coding;locus_tag=NND05_09815 JANDXE010000018.1 Protein Homology CDS 76009 77073 . - 0 ID=cds-MCP9537841.1;Parent=gene-NND05_09815;Dbxref=NCBI_GP:MCP9537841.1;Name=MCP9537841.1;gbkey=CDS;gene=gldN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410484.1;locus_tag=NND05_09815;product=gliding motility protein GldN;protein_id=MCP9537841.1;transl_table=11 JANDXE010000018.1 Genbank gene 77107 78189 . - . ID=gene-NND05_09820;Name=gldM;gbkey=Gene;gene=gldM;gene_biotype=protein_coding;locus_tag=NND05_09820 JANDXE010000018.1 Protein Homology CDS 77107 78189 . - 0 ID=cds-MCP9537842.1;Parent=gene-NND05_09820;Dbxref=NCBI_GP:MCP9537842.1;Name=MCP9537842.1;gbkey=CDS;gene=gldM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373532.1;locus_tag=NND05_09820;product=gliding motility protein GldM;protein_id=MCP9537842.1;transl_table=11 JANDXE010000018.1 Genbank gene 78190 78915 . - . ID=gene-NND05_09825;Name=gldL;gbkey=Gene;gene=gldL;gene_biotype=protein_coding;locus_tag=NND05_09825 JANDXE010000018.1 Protein Homology CDS 78190 78915 . - 0 ID=cds-MCP9537843.1;Parent=gene-NND05_09825;Dbxref=NCBI_GP:MCP9537843.1;Name=MCP9537843.1;gbkey=CDS;gene=gldL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342482.1;locus_tag=NND05_09825;product=gliding motility protein GldL;protein_id=MCP9537843.1;transl_table=11 JANDXE010000018.1 Genbank gene 78921 80381 . - . ID=gene-NND05_09830;Name=NND05_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09830 JANDXE010000018.1 Protein Homology CDS 78921 80381 . - 0 ID=cds-MCP9537844.1;Parent=gene-NND05_09830;Dbxref=NCBI_GP:MCP9537844.1;Name=MCP9537844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344174.1;locus_tag=NND05_09830;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=MCP9537844.1;transl_table=11 JANDXE010000018.1 Genbank gene 80409 81344 . - . ID=gene-NND05_09835;Name=NND05_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09835 JANDXE010000018.1 Protein Homology CDS 80409 81344 . - 0 ID=cds-MCP9537845.1;Parent=gene-NND05_09835;Dbxref=NCBI_GP:MCP9537845.1;Name=MCP9537845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920537.1;locus_tag=NND05_09835;product=type IX secretion system membrane protein PorP/SprF;protein_id=MCP9537845.1;transl_table=11 JANDXE010000018.1 Genbank gene 81588 82604 . - . ID=gene-NND05_09840;Name=NND05_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09840 JANDXE010000018.1 Protein Homology CDS 81588 82604 . - 0 ID=cds-MCP9537846.1;Parent=gene-NND05_09840;Dbxref=NCBI_GP:MCP9537846.1;Name=MCP9537846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012781.1;locus_tag=NND05_09840;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=MCP9537846.1;transl_table=11 JANDXE010000018.1 Genbank gene 82573 83202 . - . ID=gene-NND05_09845;Name=NND05_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09845 JANDXE010000018.1 Protein Homology CDS 82573 83202 . - 0 ID=cds-MCP9537847.1;Parent=gene-NND05_09845;Dbxref=NCBI_GP:MCP9537847.1;Name=MCP9537847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040319.1;locus_tag=NND05_09845;product=DUF6088 family protein;protein_id=MCP9537847.1;transl_table=11 JANDXE010000018.1 Genbank gene 83484 83705 . - . ID=gene-NND05_09850;Name=NND05_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09850 JANDXE010000018.1 Protein Homology CDS 83484 83705 . - 0 ID=cds-MCP9537848.1;Parent=gene-NND05_09850;Dbxref=NCBI_GP:MCP9537848.1;Name=MCP9537848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362633.1;locus_tag=NND05_09850;product=DUF2795 domain-containing protein;protein_id=MCP9537848.1;transl_table=11 JANDXE010000018.1 Genbank gene 83830 84411 . - . ID=gene-NND05_09855;Name=NND05_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09855 JANDXE010000018.1 GeneMarkS-2+ CDS 83830 84411 . - 0 ID=cds-MCP9537849.1;Parent=gene-NND05_09855;Dbxref=NCBI_GP:MCP9537849.1;Name=MCP9537849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09855;product=hypothetical protein;protein_id=MCP9537849.1;transl_table=11 JANDXE010000018.1 Genbank gene 84476 84588 . - . ID=gene-NND05_09860;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_09860 JANDXE010000018.1 cmsearch rRNA 84476 84588 . - . ID=rna-NND05_09860;Parent=gene-NND05_09860;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_09860;product=5S ribosomal RNA JANDXE010000018.1 cmsearch exon 84476 84588 . - . ID=exon-NND05_09860-1;Parent=rna-NND05_09860;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_09860;product=5S ribosomal RNA ##sequence-region JANDXE010000019.1 1 77644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000019.1 Genbank region 1 77644 . + . ID=JANDXE010000019.1:1..77644;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000019.1 Genbank gene 1 402 . + . ID=gene-NND05_09865;Name=NND05_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09865;partial=true;start_range=.,1 JANDXE010000019.1 GeneMarkS-2+ CDS 1 402 . + 0 ID=cds-MCP9537850.1;Parent=gene-NND05_09865;Dbxref=NCBI_GP:MCP9537850.1;Name=MCP9537850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09865;partial=true;product=hypothetical protein;protein_id=MCP9537850.1;start_range=.,1;transl_table=11 JANDXE010000019.1 Genbank gene 416 898 . + . ID=gene-NND05_09870;Name=NND05_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09870 JANDXE010000019.1 Protein Homology CDS 416 898 . + 0 ID=cds-MCP9537851.1;Parent=gene-NND05_09870;Dbxref=NCBI_GP:MCP9537851.1;Name=MCP9537851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_09870;product=DUF3408 domain-containing protein;protein_id=MCP9537851.1;transl_table=11 JANDXE010000019.1 Genbank pseudogene 1083 1250 . + . ID=gene-NND05_09875;Name=NND05_09875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_09875;pseudo=true JANDXE010000019.1 Protein Homology CDS 1083 1250 . + 0 ID=cds-NND05_09875;Parent=gene-NND05_09875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628605.1;locus_tag=NND05_09875;product=mobilization protein;pseudo=true;transl_table=11 JANDXE010000019.1 Genbank gene 1820 3115 . + . ID=gene-NND05_09880;Name=NND05_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09880 JANDXE010000019.1 Protein Homology CDS 1820 3115 . + 0 ID=cds-MCP9537852.1;Parent=gene-NND05_09880;Dbxref=NCBI_GP:MCP9537852.1;Name=MCP9537852.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=NND05_09880;product=radical SAM protein;protein_id=MCP9537852.1;transl_table=11 JANDXE010000019.1 Genbank gene 3105 5213 . + . ID=gene-NND05_09885;Name=NND05_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09885 JANDXE010000019.1 GeneMarkS-2+ CDS 3105 5213 . + 0 ID=cds-MCP9537853.1;Parent=gene-NND05_09885;Dbxref=NCBI_GP:MCP9537853.1;Name=MCP9537853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09885;product=outer membrane beta-barrel family protein;protein_id=MCP9537853.1;transl_table=11 JANDXE010000019.1 Genbank gene 5219 7417 . + . ID=gene-NND05_09890;Name=NND05_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09890 JANDXE010000019.1 Protein Homology CDS 5219 7417 . + 0 ID=cds-MCP9537854.1;Parent=gene-NND05_09890;Dbxref=NCBI_GP:MCP9537854.1;Name=MCP9537854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366814.1;locus_tag=NND05_09890;product=peptidase domain-containing ABC transporter;protein_id=MCP9537854.1;transl_table=11 JANDXE010000019.1 Genbank gene 7430 7906 . + . ID=gene-NND05_09895;Name=NND05_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09895 JANDXE010000019.1 Protein Homology CDS 7430 7906 . + 0 ID=cds-MCP9537855.1;Parent=gene-NND05_09895;Dbxref=NCBI_GP:MCP9537855.1;Name=MCP9537855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574398.1;locus_tag=NND05_09895;product=hypothetical protein;protein_id=MCP9537855.1;transl_table=11 JANDXE010000019.1 Genbank gene 8424 9131 . + . ID=gene-NND05_09900;Name=NND05_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09900 JANDXE010000019.1 Protein Homology CDS 8424 9131 . + 0 ID=cds-MCP9537856.1;Parent=gene-NND05_09900;Dbxref=NCBI_GP:MCP9537856.1;Name=MCP9537856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848248.1;locus_tag=NND05_09900;product=response regulator transcription factor;protein_id=MCP9537856.1;transl_table=11 JANDXE010000019.1 Genbank gene 9207 10001 . + . ID=gene-NND05_09905;Name=NND05_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09905 JANDXE010000019.1 GeneMarkS-2+ CDS 9207 10001 . + 0 ID=cds-MCP9537857.1;Parent=gene-NND05_09905;Dbxref=NCBI_GP:MCP9537857.1;Name=MCP9537857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09905;product=hypothetical protein;protein_id=MCP9537857.1;transl_table=11 JANDXE010000019.1 Genbank gene 9988 10944 . + . ID=gene-NND05_09910;Name=NND05_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09910 JANDXE010000019.1 Protein Homology CDS 9988 10944 . + 0 ID=cds-MCP9537858.1;Parent=gene-NND05_09910;Dbxref=NCBI_GP:MCP9537858.1;Name=MCP9537858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_09910;product=HAMP domain-containing histidine kinase;protein_id=MCP9537858.1;transl_table=11 JANDXE010000019.1 Genbank gene 10991 11959 . + . ID=gene-NND05_09915;Name=NND05_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09915 JANDXE010000019.1 Protein Homology CDS 10991 11959 . + 0 ID=cds-MCP9537859.1;Parent=gene-NND05_09915;Dbxref=NCBI_GP:MCP9537859.1;Name=MCP9537859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412430.1;locus_tag=NND05_09915;product=aldo/keto reductase;protein_id=MCP9537859.1;transl_table=11 JANDXE010000019.1 Genbank gene 12104 13369 . + . ID=gene-NND05_09920;Name=NND05_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09920 JANDXE010000019.1 Protein Homology CDS 12104 13369 . + 0 ID=cds-MCP9537860.1;Parent=gene-NND05_09920;Dbxref=NCBI_GP:MCP9537860.1;Name=MCP9537860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848256.1;locus_tag=NND05_09920;product=U32 family peptidase;protein_id=MCP9537860.1;transl_table=11 JANDXE010000019.1 Genbank gene 13369 13800 . + . ID=gene-NND05_09925;Name=NND05_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09925 JANDXE010000019.1 Protein Homology CDS 13369 13800 . + 0 ID=cds-MCP9537861.1;Parent=gene-NND05_09925;Dbxref=NCBI_GP:MCP9537861.1;Name=MCP9537861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848257.1;locus_tag=NND05_09925;product=SufE family protein;protein_id=MCP9537861.1;transl_table=11 JANDXE010000019.1 Genbank gene 13845 14429 . + . ID=gene-NND05_09930;Name=NND05_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09930 JANDXE010000019.1 Protein Homology CDS 13845 14429 . + 0 ID=cds-MCP9537862.1;Parent=gene-NND05_09930;Dbxref=NCBI_GP:MCP9537862.1;Name=MCP9537862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004363874.1;locus_tag=NND05_09930;product=RNA methyltransferase;protein_id=MCP9537862.1;transl_table=11 JANDXE010000019.1 Genbank gene 14605 16110 . - . ID=gene-NND05_09935;Name=NND05_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09935 JANDXE010000019.1 Protein Homology CDS 14605 16110 . - 0 ID=cds-MCP9537863.1;Parent=gene-NND05_09935;Dbxref=NCBI_GP:MCP9537863.1;Name=MCP9537863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848885.1;locus_tag=NND05_09935;product=acetyl-CoA hydrolase;protein_id=MCP9537863.1;transl_table=11 JANDXE010000019.1 Genbank gene 16515 18005 . + . ID=gene-NND05_09940;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NND05_09940 JANDXE010000019.1 Protein Homology CDS 16515 18005 . + 0 ID=cds-MCP9537864.1;Parent=gene-NND05_09940;Dbxref=NCBI_GP:MCP9537864.1;Name=MCP9537864.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848890.1;locus_tag=NND05_09940;product=cysteine--tRNA ligase;protein_id=MCP9537864.1;transl_table=11 JANDXE010000019.1 Genbank gene 18171 18773 . + . ID=gene-NND05_09945;Name=NND05_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09945 JANDXE010000019.1 GeneMarkS-2+ CDS 18171 18773 . + 0 ID=cds-MCP9537865.1;Parent=gene-NND05_09945;Dbxref=NCBI_GP:MCP9537865.1;Name=MCP9537865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09945;product=hypothetical protein;protein_id=MCP9537865.1;transl_table=11 JANDXE010000019.1 Genbank gene 18770 20533 . - . ID=gene-NND05_09950;Name=NND05_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09950 JANDXE010000019.1 Protein Homology CDS 18770 20533 . - 0 ID=cds-MCP9537866.1;Parent=gene-NND05_09950;Dbxref=NCBI_GP:MCP9537866.1;Name=MCP9537866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848891.1;locus_tag=NND05_09950;product=calcineurin-like phosphoesterase family protein;protein_id=MCP9537866.1;transl_table=11 JANDXE010000019.1 Genbank gene 20585 21397 . - . ID=gene-NND05_09955;Name=NND05_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09955 JANDXE010000019.1 Protein Homology CDS 20585 21397 . - 0 ID=cds-MCP9537867.1;Parent=gene-NND05_09955;Dbxref=NCBI_GP:MCP9537867.1;Name=MCP9537867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848245.1;locus_tag=NND05_09955;product=DUF3108 domain-containing protein;protein_id=MCP9537867.1;transl_table=11 JANDXE010000019.1 Genbank gene 21403 23382 . - . ID=gene-NND05_09960;Name=NND05_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09960 JANDXE010000019.1 Protein Homology CDS 21403 23382 . - 0 ID=cds-MCP9537868.1;Parent=gene-NND05_09960;Dbxref=NCBI_GP:MCP9537868.1;Name=MCP9537868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848244.1;locus_tag=NND05_09960;product=Ig-like domain-containing domain;protein_id=MCP9537868.1;transl_table=11 JANDXE010000019.1 Genbank gene 23465 24973 . - . ID=gene-NND05_09965;Name=NND05_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09965 JANDXE010000019.1 Protein Homology CDS 23465 24973 . - 0 ID=cds-MCP9537869.1;Parent=gene-NND05_09965;Dbxref=NCBI_GP:MCP9537869.1;Name=MCP9537869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848243.1;locus_tag=NND05_09965;product=GH3 auxin-responsive promoter family protein;protein_id=MCP9537869.1;transl_table=11 JANDXE010000019.1 Genbank gene 25190 26278 . - . ID=gene-NND05_09970;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=NND05_09970 JANDXE010000019.1 Protein Homology CDS 25190 26278 . - 0 ID=cds-MCP9537870.1;Parent=gene-NND05_09970;Dbxref=NCBI_GP:MCP9537870.1;Name=MCP9537870.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373069.1;locus_tag=NND05_09970;product=ribonuclease III;protein_id=MCP9537870.1;transl_table=11 JANDXE010000019.1 Genbank gene 26268 27530 . - . ID=gene-NND05_09975;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NND05_09975 JANDXE010000019.1 Protein Homology CDS 26268 27530 . - 0 ID=cds-MCP9537871.1;Parent=gene-NND05_09975;Dbxref=NCBI_GP:MCP9537871.1;Name=MCP9537871.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709165.1;locus_tag=NND05_09975;product=beta-ketoacyl-ACP synthase II;protein_id=MCP9537871.1;transl_table=11 JANDXE010000019.1 Genbank gene 27553 27789 . - . ID=gene-NND05_09980;Name=NND05_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09980 JANDXE010000019.1 Protein Homology CDS 27553 27789 . - 0 ID=cds-MCP9537872.1;Parent=gene-NND05_09980;Dbxref=NCBI_GP:MCP9537872.1;Name=MCP9537872.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004347843.1;locus_tag=NND05_09980;product=acyl carrier protein;protein_id=MCP9537872.1;transl_table=11 JANDXE010000019.1 Genbank gene 28015 28617 . + . ID=gene-NND05_09985;Name=NND05_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09985 JANDXE010000019.1 Protein Homology CDS 28015 28617 . + 0 ID=cds-MCP9537873.1;Parent=gene-NND05_09985;Dbxref=NCBI_GP:MCP9537873.1;Name=MCP9537873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134961.1;locus_tag=NND05_09985;product=DUF4254 domain-containing protein;protein_id=MCP9537873.1;transl_table=11 JANDXE010000019.1 Genbank gene 28725 29843 . + . ID=gene-NND05_09990;Name=NND05_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09990 JANDXE010000019.1 Protein Homology CDS 28725 29843 . + 0 ID=cds-MCP9537874.1;Parent=gene-NND05_09990;Dbxref=NCBI_GP:MCP9537874.1;Name=MCP9537874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006947683.1;locus_tag=NND05_09990;product=glycosyltransferase family 9 protein;protein_id=MCP9537874.1;transl_table=11 JANDXE010000019.1 Genbank gene 29886 30251 . - . ID=gene-NND05_09995;Name=NND05_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_09995 JANDXE010000019.1 GeneMarkS-2+ CDS 29886 30251 . - 0 ID=cds-MCP9537875.1;Parent=gene-NND05_09995;Dbxref=NCBI_GP:MCP9537875.1;Name=MCP9537875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_09995;product=hypothetical protein;protein_id=MCP9537875.1;transl_table=11 JANDXE010000019.1 Genbank gene 30801 31793 . + . ID=gene-NND05_10000;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=NND05_10000 JANDXE010000019.1 Protein Homology CDS 30801 31793 . + 0 ID=cds-MCP9537876.1;Parent=gene-NND05_10000;Dbxref=NCBI_GP:MCP9537876.1;Name=MCP9537876.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344614.1;locus_tag=NND05_10000;product=quinolinate synthase NadA;protein_id=MCP9537876.1;transl_table=11 JANDXE010000019.1 Genbank gene 32412 33482 . + . ID=gene-NND05_10005;Name=NND05_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10005 JANDXE010000019.1 Protein Homology CDS 32412 33482 . + 0 ID=cds-MCP9537877.1;Parent=gene-NND05_10005;Dbxref=NCBI_GP:MCP9537877.1;Name=MCP9537877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235430.1;locus_tag=NND05_10005;product=hypothetical protein;protein_id=MCP9537877.1;transl_table=11 JANDXE010000019.1 Genbank pseudogene 33609 33989 . - . ID=gene-NND05_10010;Name=NND05_10010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_10010;pseudo=true JANDXE010000019.1 Protein Homology CDS 33609 33989 . - 0 ID=cds-NND05_10010;Parent=gene-NND05_10010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013610707.1;locus_tag=NND05_10010;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;transl_table=11 JANDXE010000019.1 Genbank gene 33990 36266 . - . ID=gene-NND05_10015;Name=NND05_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10015 JANDXE010000019.1 Protein Homology CDS 33990 36266 . - 0 ID=cds-MCP9537878.1;Parent=gene-NND05_10015;Dbxref=NCBI_GP:MCP9537878.1;Name=MCP9537878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_10015;product=outer membrane beta-barrel family protein;protein_id=MCP9537878.1;transl_table=11 JANDXE010000019.1 Genbank gene 36975 38018 . + . ID=gene-NND05_10020;Name=NND05_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10020 JANDXE010000019.1 Protein Homology CDS 36975 38018 . + 0 ID=cds-MCP9537879.1;Parent=gene-NND05_10020;Dbxref=NCBI_GP:MCP9537879.1;Name=MCP9537879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_10020;product=HAMP domain-containing histidine kinase;protein_id=MCP9537879.1;transl_table=11 JANDXE010000019.1 Genbank gene 38048 38728 . + . ID=gene-NND05_10025;Name=NND05_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10025 JANDXE010000019.1 Protein Homology CDS 38048 38728 . + 0 ID=cds-MCP9537880.1;Parent=gene-NND05_10025;Dbxref=NCBI_GP:MCP9537880.1;Name=MCP9537880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_10025;product=response regulator transcription factor;protein_id=MCP9537880.1;transl_table=11 JANDXE010000019.1 Genbank gene 38981 40705 . - . ID=gene-NND05_10030;Name=NND05_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10030 JANDXE010000019.1 Protein Homology CDS 38981 40705 . - 0 ID=cds-MCP9537881.1;Parent=gene-NND05_10030;Dbxref=NCBI_GP:MCP9537881.1;Name=MCP9537881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864458.1;locus_tag=NND05_10030;product=ATP-binding protein;protein_id=MCP9537881.1;transl_table=11 JANDXE010000019.1 Genbank gene 40851 42029 . - . ID=gene-NND05_10035;Name=NND05_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10035 JANDXE010000019.1 Protein Homology CDS 40851 42029 . - 0 ID=cds-MCP9537882.1;Parent=gene-NND05_10035;Dbxref=NCBI_GP:MCP9537882.1;Name=MCP9537882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014710213.1;locus_tag=NND05_10035;product=glycosyltransferase family 1 protein;protein_id=MCP9537882.1;transl_table=11 JANDXE010000019.1 Genbank gene 42079 43059 . - . ID=gene-NND05_10040;Name=NND05_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10040 JANDXE010000019.1 Protein Homology CDS 42079 43059 . - 0 ID=cds-MCP9537883.1;Parent=gene-NND05_10040;Dbxref=NCBI_GP:MCP9537883.1;Name=MCP9537883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848234.1;locus_tag=NND05_10040;product=glycosyltransferase;protein_id=MCP9537883.1;transl_table=11 JANDXE010000019.1 Genbank gene 43014 44078 . - . ID=gene-NND05_10045;Name=NND05_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10045 JANDXE010000019.1 Protein Homology CDS 43014 44078 . - 0 ID=cds-MCP9537884.1;Parent=gene-NND05_10045;Dbxref=NCBI_GP:MCP9537884.1;Name=MCP9537884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NND05_10045;product=glycosyltransferase;protein_id=MCP9537884.1;transl_table=11 JANDXE010000019.1 Genbank gene 44140 46164 . - . ID=gene-NND05_10050;Name=NND05_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10050 JANDXE010000019.1 Protein Homology CDS 44140 46164 . - 0 ID=cds-MCP9537885.1;Parent=gene-NND05_10050;Dbxref=NCBI_GP:MCP9537885.1;Name=MCP9537885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848227.1;locus_tag=NND05_10050;product=T9SS type A sorting domain-containing protein;protein_id=MCP9537885.1;transl_table=11 JANDXE010000019.1 Genbank gene 46161 47111 . - . ID=gene-NND05_10055;Name=NND05_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10055 JANDXE010000019.1 Protein Homology CDS 46161 47111 . - 0 ID=cds-MCP9537886.1;Parent=gene-NND05_10055;Dbxref=NCBI_GP:MCP9537886.1;Name=MCP9537886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370130.1;locus_tag=NND05_10055;product=glycosyltransferase;protein_id=MCP9537886.1;transl_table=11 JANDXE010000019.1 Genbank gene 47104 47721 . - . ID=gene-NND05_10060;Name=NND05_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10060 JANDXE010000019.1 Protein Homology CDS 47104 47721 . - 0 ID=cds-MCP9537887.1;Parent=gene-NND05_10060;Dbxref=NCBI_GP:MCP9537887.1;Name=MCP9537887.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside-triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342048.1;locus_tag=NND05_10060;product=non-canonical purine NTP diphosphatase;protein_id=MCP9537887.1;transl_table=11 JANDXE010000019.1 Genbank gene 47727 48680 . - . ID=gene-NND05_10065;Name=NND05_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10065 JANDXE010000019.1 Protein Homology CDS 47727 48680 . - 0 ID=cds-MCP9537888.1;Parent=gene-NND05_10065;Dbxref=NCBI_GP:MCP9537888.1;Name=MCP9537888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848224.1;locus_tag=NND05_10065;product=YitT family protein;protein_id=MCP9537888.1;transl_table=11 JANDXE010000019.1 Genbank gene 48759 51620 . - . ID=gene-NND05_10070;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=NND05_10070 JANDXE010000019.1 Protein Homology CDS 48759 51620 . - 0 ID=cds-MCP9537889.1;Parent=gene-NND05_10070;Dbxref=NCBI_GP:MCP9537889.1;Name=MCP9537889.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848223.1;locus_tag=NND05_10070;product=leucine--tRNA ligase;protein_id=MCP9537889.1;transl_table=11 JANDXE010000019.1 Genbank gene 52731 54482 . - . ID=gene-NND05_10075;Name=NND05_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10075 JANDXE010000019.1 Protein Homology CDS 52731 54482 . - 0 ID=cds-MCP9537890.1;Parent=gene-NND05_10075;Dbxref=NCBI_GP:MCP9537890.1;Name=MCP9537890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016274615.1;locus_tag=NND05_10075;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537890.1;transl_table=11 JANDXE010000019.1 Genbank gene 54533 57727 . - . ID=gene-NND05_10080;Name=NND05_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10080 JANDXE010000019.1 Protein Homology CDS 54533 57727 . - 0 ID=cds-MCP9537891.1;Parent=gene-NND05_10080;Dbxref=NCBI_GP:MCP9537891.1;Name=MCP9537891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644853.1;locus_tag=NND05_10080;product=TonB-dependent receptor;protein_id=MCP9537891.1;transl_table=11 JANDXE010000019.1 Genbank gene 58032 59432 . - . ID=gene-NND05_10085;Name=NND05_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10085 JANDXE010000019.1 GeneMarkS-2+ CDS 58032 59432 . - 0 ID=cds-MCP9537892.1;Parent=gene-NND05_10085;Dbxref=NCBI_GP:MCP9537892.1;Name=MCP9537892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10085;product=hypothetical protein;protein_id=MCP9537892.1;transl_table=11 JANDXE010000019.1 Genbank gene 59886 61088 . + . ID=gene-NND05_10090;Name=NND05_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10090 JANDXE010000019.1 Protein Homology CDS 59886 61088 . + 0 ID=cds-MCP9537893.1;Parent=gene-NND05_10090;Dbxref=NCBI_GP:MCP9537893.1;Name=MCP9537893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848212.1;locus_tag=NND05_10090;product=DUF3874 domain-containing protein;protein_id=MCP9537893.1;transl_table=11 JANDXE010000019.1 Genbank gene 61526 61945 . + . ID=gene-NND05_10095;Name=NND05_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10095 JANDXE010000019.1 Protein Homology CDS 61526 61945 . + 0 ID=cds-MCP9537894.1;Parent=gene-NND05_10095;Dbxref=NCBI_GP:MCP9537894.1;Name=MCP9537894.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039981.1;locus_tag=NND05_10095;product=DUF6078 family protein;protein_id=MCP9537894.1;transl_table=11 JANDXE010000019.1 Genbank gene 62020 62334 . - . ID=gene-NND05_10100;Name=NND05_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10100 JANDXE010000019.1 Protein Homology CDS 62020 62334 . - 0 ID=cds-MCP9537895.1;Parent=gene-NND05_10100;Dbxref=NCBI_GP:MCP9537895.1;Name=MCP9537895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611929.1;locus_tag=NND05_10100;product=helix-turn-helix domain-containing protein;protein_id=MCP9537895.1;transl_table=11 JANDXE010000019.1 Genbank gene 62334 62681 . - . ID=gene-NND05_10105;Name=NND05_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10105 JANDXE010000019.1 Protein Homology CDS 62334 62681 . - 0 ID=cds-MCP9537896.1;Parent=gene-NND05_10105;Dbxref=NCBI_GP:MCP9537896.1;Name=MCP9537896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008644356.1;locus_tag=NND05_10105;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9537896.1;transl_table=11 JANDXE010000019.1 Genbank gene 63341 66250 . + . ID=gene-NND05_10110;Name=NND05_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10110 JANDXE010000019.1 Protein Homology CDS 63341 66250 . + 0 ID=cds-MCP9537897.1;Parent=gene-NND05_10110;Dbxref=NCBI_GP:MCP9537897.1;Name=MCP9537897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_10110;product=outer membrane beta-barrel family protein;protein_id=MCP9537897.1;transl_table=11 JANDXE010000019.1 Genbank gene 66522 68057 . - . ID=gene-NND05_10115;Name=NND05_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10115 JANDXE010000019.1 Protein Homology CDS 66522 68057 . - 0 ID=cds-MCP9537898.1;Parent=gene-NND05_10115;Dbxref=NCBI_GP:MCP9537898.1;Name=MCP9537898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010992575.1;locus_tag=NND05_10115;product=arylsulfatase;protein_id=MCP9537898.1;transl_table=11 JANDXE010000019.1 Genbank gene 68073 69296 . - . ID=gene-NND05_10120;Name=NND05_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10120 JANDXE010000019.1 Protein Homology CDS 68073 69296 . - 0 ID=cds-MCP9537899.1;Parent=gene-NND05_10120;Dbxref=NCBI_GP:MCP9537899.1;Name=MCP9537899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007575349.1;locus_tag=NND05_10120;product=anaerobic sulfatase-maturation protein;protein_id=MCP9537899.1;transl_table=11 JANDXE010000019.1 Genbank gene 69356 70849 . - . ID=gene-NND05_10125;Name=NND05_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10125 JANDXE010000019.1 Protein Homology CDS 69356 70849 . - 0 ID=cds-MCP9537900.1;Parent=gene-NND05_10125;Dbxref=NCBI_GP:MCP9537900.1;Name=MCP9537900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007216905.1;locus_tag=NND05_10125;product=arylsulfatase;protein_id=MCP9537900.1;transl_table=11 JANDXE010000019.1 Genbank gene 70945 72567 . - . ID=gene-NND05_10130;Name=NND05_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10130 JANDXE010000019.1 Protein Homology CDS 70945 72567 . - 0 ID=cds-MCP9537901.1;Parent=gene-NND05_10130;Dbxref=NCBI_GP:MCP9537901.1;Name=MCP9537901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008122265.1;locus_tag=NND05_10130;product=sulfatase;protein_id=MCP9537901.1;transl_table=11 JANDXE010000019.1 Genbank gene 72814 74463 . - . ID=gene-NND05_10135;Name=NND05_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10135 JANDXE010000019.1 Protein Homology CDS 72814 74463 . - 0 ID=cds-MCP9537902.1;Parent=gene-NND05_10135;Dbxref=NCBI_GP:MCP9537902.1;Name=MCP9537902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008671127.1;locus_tag=NND05_10135;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537902.1;transl_table=11 JANDXE010000019.1 Genbank gene 74516 77515 . - . ID=gene-NND05_10140;Name=NND05_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10140 JANDXE010000019.1 Protein Homology CDS 74516 77515 . - 0 ID=cds-MCP9537903.1;Parent=gene-NND05_10140;Dbxref=NCBI_GP:MCP9537903.1;Name=MCP9537903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005781860.1;locus_tag=NND05_10140;product=TonB-dependent receptor;protein_id=MCP9537903.1;transl_table=11 ##sequence-region JANDXE010000020.1 1 73463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000020.1 Genbank region 1 73463 . + . ID=JANDXE010000020.1:1..73463;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000020.1 Genbank gene 1 634 . - . ID=gene-NND05_10145;Name=NND05_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10145;partial=true;start_range=.,1 JANDXE010000020.1 Protein Homology CDS 1 634 . - 0 ID=cds-MCP9537904.1;Parent=gene-NND05_10145;Dbxref=NCBI_GP:MCP9537904.1;Name=MCP9537904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016661790.1;locus_tag=NND05_10145;partial=true;product=phage integrase SAM-like domain and Arm DNA-binding domain-containing protein;protein_id=MCP9537904.1;start_range=.,1;transl_table=11 JANDXE010000020.1 Genbank gene 1118 2428 . + . ID=gene-NND05_10150;Name=NND05_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10150 JANDXE010000020.1 Protein Homology CDS 1118 2428 . + 0 ID=cds-MCP9537905.1;Parent=gene-NND05_10150;Dbxref=NCBI_GP:MCP9537905.1;Name=MCP9537905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127236.1;locus_tag=NND05_10150;product=aminopeptidase;protein_id=MCP9537905.1;transl_table=11 JANDXE010000020.1 Genbank gene 2682 3821 . - . ID=gene-NND05_10155;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=NND05_10155 JANDXE010000020.1 Protein Homology CDS 2682 3821 . - 0 ID=cds-MCP9537906.1;Parent=gene-NND05_10155;Dbxref=NCBI_GP:MCP9537906.1;Name=MCP9537906.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848700.1;locus_tag=NND05_10155;product=2-iminoacetate synthase ThiH;protein_id=MCP9537906.1;transl_table=11 JANDXE010000020.1 Genbank gene 3826 5520 . - . ID=gene-NND05_10160;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NND05_10160 JANDXE010000020.1 Protein Homology CDS 3826 5520 . - 0 ID=cds-MCP9537907.1;Parent=gene-NND05_10160;Dbxref=NCBI_GP:MCP9537907.1;Name=MCP9537907.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281474.1;locus_tag=NND05_10160;product=phosphomethylpyrimidine synthase ThiC;protein_id=MCP9537907.1;transl_table=11 JANDXE010000020.1 Genbank gene 5548 6321 . - . ID=gene-NND05_10165;Name=NND05_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10165 JANDXE010000020.1 Protein Homology CDS 5548 6321 . - 0 ID=cds-MCP9537908.1;Parent=gene-NND05_10165;Dbxref=NCBI_GP:MCP9537908.1;Name=MCP9537908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008142153.1;locus_tag=NND05_10165;product=thiazole synthase;protein_id=MCP9537908.1;transl_table=11 JANDXE010000020.1 Genbank gene 6352 7002 . - . ID=gene-NND05_10170;Name=NND05_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10170 JANDXE010000020.1 Protein Homology CDS 6352 7002 . - 0 ID=cds-MCP9537909.1;Parent=gene-NND05_10170;Dbxref=NCBI_GP:MCP9537909.1;Name=MCP9537909.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007563924.1;locus_tag=NND05_10170;product=thiamine phosphate synthase;protein_id=MCP9537909.1;transl_table=11 JANDXE010000020.1 Genbank gene 7030 7227 . - . ID=gene-NND05_10175;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NND05_10175 JANDXE010000020.1 Protein Homology CDS 7030 7227 . - 0 ID=cds-MCP9537910.1;Parent=gene-NND05_10175;Dbxref=NCBI_GP:MCP9537910.1;Name=MCP9537910.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004290943.1;locus_tag=NND05_10175;product=sulfur carrier protein ThiS;protein_id=MCP9537910.1;transl_table=11 JANDXE010000020.1 cmsearch riboswitch 7346 7439 . - . ID=id-JANDXE010000020.1:7346..7439;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JANDXE010000020.1 Genbank gene 7632 7811 . - . ID=gene-NND05_10180;Name=NND05_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10180 JANDXE010000020.1 GeneMarkS-2+ CDS 7632 7811 . - 0 ID=cds-MCP9537911.1;Parent=gene-NND05_10180;Dbxref=NCBI_GP:MCP9537911.1;Name=MCP9537911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10180;product=hypothetical protein;protein_id=MCP9537911.1;transl_table=11 JANDXE010000020.1 Genbank gene 8246 9019 . - . ID=gene-NND05_10185;Name=NND05_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10185 JANDXE010000020.1 Protein Homology CDS 8246 9019 . - 0 ID=cds-MCP9537912.1;Parent=gene-NND05_10185;Dbxref=NCBI_GP:MCP9537912.1;Name=MCP9537912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024968.2;locus_tag=NND05_10185;product=hypothetical protein;protein_id=MCP9537912.1;transl_table=11 JANDXE010000020.1 Genbank gene 9054 10199 . - . ID=gene-NND05_10190;Name=NND05_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10190 JANDXE010000020.1 Protein Homology CDS 9054 10199 . - 0 ID=cds-MCP9537913.1;Parent=gene-NND05_10190;Dbxref=NCBI_GP:MCP9537913.1;Name=MCP9537913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342317.1;locus_tag=NND05_10190;product=glycosyl transferase family 2;protein_id=MCP9537913.1;transl_table=11 JANDXE010000020.1 Genbank gene 10252 11409 . - . ID=gene-NND05_10195;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=NND05_10195 JANDXE010000020.1 Protein Homology CDS 10252 11409 . - 0 ID=cds-MCP9537914.1;Parent=gene-NND05_10195;Dbxref=NCBI_GP:MCP9537914.1;Name=MCP9537914.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846457.1;locus_tag=NND05_10195;product=diaminopimelate decarboxylase;protein_id=MCP9537914.1;transl_table=11 JANDXE010000020.1 Genbank gene 11553 12872 . - . ID=gene-NND05_10200;Name=NND05_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10200 JANDXE010000020.1 Protein Homology CDS 11553 12872 . - 0 ID=cds-MCP9537915.1;Parent=gene-NND05_10200;Dbxref=NCBI_GP:MCP9537915.1;Name=MCP9537915.1;Ontology_term=GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282985.1;locus_tag=NND05_10200;product=aspartate kinase;protein_id=MCP9537915.1;transl_table=11 JANDXE010000020.1 Genbank gene 12931 13647 . - . ID=gene-NND05_10205;Name=NND05_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10205 JANDXE010000020.1 Protein Homology CDS 12931 13647 . - 0 ID=cds-MCP9537916.1;Parent=gene-NND05_10205;Dbxref=NCBI_GP:MCP9537916.1;Name=MCP9537916.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172965.1;locus_tag=NND05_10205;product=ATP-binding cassette domain-containing protein;protein_id=MCP9537916.1;transl_table=11 JANDXE010000020.1 Genbank gene 13801 14448 . - . ID=gene-NND05_10210;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=NND05_10210 JANDXE010000020.1 Protein Homology CDS 13801 14448 . - 0 ID=cds-MCP9537917.1;Parent=gene-NND05_10210;Dbxref=NCBI_GP:MCP9537917.1;Name=MCP9537917.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846460.1;locus_tag=NND05_10210;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=MCP9537917.1;transl_table=11 JANDXE010000020.1 Genbank gene 14600 15379 . - . ID=gene-NND05_10215;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=NND05_10215 JANDXE010000020.1 Protein Homology CDS 14600 15379 . - 0 ID=cds-MCP9537918.1;Parent=gene-NND05_10215;Dbxref=NCBI_GP:MCP9537918.1;Name=MCP9537918.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846461.1;locus_tag=NND05_10215;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=MCP9537918.1;transl_table=11 JANDXE010000020.1 Genbank gene 15399 16115 . - . ID=gene-NND05_10220;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=NND05_10220 JANDXE010000020.1 Protein Homology CDS 15399 16115 . - 0 ID=cds-MCP9537919.1;Parent=gene-NND05_10220;Dbxref=NCBI_GP:MCP9537919.1;Name=MCP9537919.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282981.1;locus_tag=NND05_10220;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=MCP9537919.1;transl_table=11 JANDXE010000020.1 Genbank gene 16129 16764 . - . ID=gene-NND05_10225;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=NND05_10225 JANDXE010000020.1 Protein Homology CDS 16129 16764 . - 0 ID=cds-MCP9537920.1;Parent=gene-NND05_10225;Dbxref=NCBI_GP:MCP9537920.1;Name=MCP9537920.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846463.1;locus_tag=NND05_10225;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=MCP9537920.1;transl_table=11 JANDXE010000020.1 Genbank gene 17019 17552 . - . ID=gene-NND05_10230;Name=NND05_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10230 JANDXE010000020.1 Protein Homology CDS 17019 17552 . - 0 ID=cds-MCP9537921.1;Parent=gene-NND05_10230;Dbxref=NCBI_GP:MCP9537921.1;Name=MCP9537921.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342308.1;locus_tag=NND05_10230;product=FHA domain-containing protein;protein_id=MCP9537921.1;transl_table=11 JANDXE010000020.1 Genbank gene 17602 18666 . - . ID=gene-NND05_10235;Name=NND05_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10235 JANDXE010000020.1 Protein Homology CDS 17602 18666 . - 0 ID=cds-MCP9537922.1;Parent=gene-NND05_10235;Dbxref=NCBI_GP:MCP9537922.1;Name=MCP9537922.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846466.1;locus_tag=NND05_10235;product=SPOR domain-containing protein;protein_id=MCP9537922.1;transl_table=11 JANDXE010000020.1 Genbank gene 18888 19442 . + . ID=gene-NND05_10240;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NND05_10240 JANDXE010000020.1 Protein Homology CDS 18888 19442 . + 0 ID=cds-MCP9537923.1;Parent=gene-NND05_10240;Dbxref=NCBI_GP:MCP9537923.1;Name=MCP9537923.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265632.1;locus_tag=NND05_10240;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=MCP9537923.1;transl_table=11 JANDXE010000020.1 Genbank gene 19457 20263 . + . ID=gene-NND05_10245;Name=NND05_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10245 JANDXE010000020.1 Protein Homology CDS 19457 20263 . + 0 ID=cds-MCP9537924.1;Parent=gene-NND05_10245;Dbxref=NCBI_GP:MCP9537924.1;Name=MCP9537924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846468.1;locus_tag=NND05_10245;product=DUF4738 domain-containing protein;protein_id=MCP9537924.1;transl_table=11 JANDXE010000020.1 Genbank gene 20484 21632 . - . ID=gene-NND05_10250;Name=NND05_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10250 JANDXE010000020.1 Protein Homology CDS 20484 21632 . - 0 ID=cds-MCP9537925.1;Parent=gene-NND05_10250;Dbxref=NCBI_GP:MCP9537925.1;Name=MCP9537925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846469.1;locus_tag=NND05_10250;product=sodium ion-translocating decarboxylase subunit beta;protein_id=MCP9537925.1;transl_table=11 JANDXE010000020.1 Genbank gene 21640 22107 . - . ID=gene-NND05_10255;Name=NND05_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10255 JANDXE010000020.1 Protein Homology CDS 21640 22107 . - 0 ID=cds-MCP9537926.1;Parent=gene-NND05_10255;Dbxref=NCBI_GP:MCP9537926.1;Name=MCP9537926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005826788.1;locus_tag=NND05_10255;product=biotin/lipoyl-binding protein;protein_id=MCP9537926.1;transl_table=11 JANDXE010000020.1 Genbank gene 22116 23129 . - . ID=gene-NND05_10260;Name=NND05_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10260 JANDXE010000020.1 Protein Homology CDS 22116 23129 . - 0 ID=cds-MCP9537927.1;Parent=gene-NND05_10260;Dbxref=NCBI_GP:MCP9537927.1;Name=MCP9537927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016187.2;locus_tag=NND05_10260;product=OadG family protein;protein_id=MCP9537927.1;transl_table=11 JANDXE010000020.1 Genbank gene 23332 25026 . - . ID=gene-NND05_10265;Name=NND05_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10265 JANDXE010000020.1 Protein Homology CDS 23332 25026 . - 0 ID=cds-MCP9537928.1;Parent=gene-NND05_10265;Dbxref=NCBI_GP:MCP9537928.1;Name=MCP9537928.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919196.1;locus_tag=NND05_10265;product=putative transporter;protein_id=MCP9537928.1;transl_table=11 JANDXE010000020.1 Genbank gene 25178 26425 . - . ID=gene-NND05_10270;Name=NND05_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10270 JANDXE010000020.1 Protein Homology CDS 25178 26425 . - 0 ID=cds-MCP9537929.1;Parent=gene-NND05_10270;Dbxref=NCBI_GP:MCP9537929.1;Name=MCP9537929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340896.1;locus_tag=NND05_10270;product=phosphoglycerate kinase;protein_id=MCP9537929.1;transl_table=11 JANDXE010000020.1 Genbank gene 26759 28243 . + . ID=gene-NND05_10275;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=NND05_10275 JANDXE010000020.1 Protein Homology CDS 26759 28243 . + 0 ID=cds-MCP9537930.1;Parent=gene-NND05_10275;Dbxref=NCBI_GP:MCP9537930.1;Name=MCP9537930.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410502.1;locus_tag=NND05_10275;product=DNA repair protein RadA;protein_id=MCP9537930.1;transl_table=11 JANDXE010000020.1 Genbank gene 28343 28996 . + . ID=gene-NND05_10280;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=NND05_10280 JANDXE010000020.1 Protein Homology CDS 28343 28996 . + 0 ID=cds-MCP9537931.1;Parent=gene-NND05_10280;Dbxref=NCBI_GP:MCP9537931.1;Name=MCP9537931.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920774.1;locus_tag=NND05_10280;product=7-cyano-7-deazaguanine synthase QueC;protein_id=MCP9537931.1;transl_table=11 JANDXE010000020.1 Genbank gene 29034 30158 . + . ID=gene-NND05_10285;Name=NND05_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10285 JANDXE010000020.1 Protein Homology CDS 29034 30158 . + 0 ID=cds-MCP9537932.1;Parent=gene-NND05_10285;Dbxref=NCBI_GP:MCP9537932.1;Name=MCP9537932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373232.1;locus_tag=NND05_10285;product=AhpC/TSA family protein;protein_id=MCP9537932.1;transl_table=11 JANDXE010000020.1 Genbank gene 30319 31680 . - . ID=gene-NND05_10290;Name=NND05_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10290 JANDXE010000020.1 Protein Homology CDS 30319 31680 . - 0 ID=cds-MCP9537933.1;Parent=gene-NND05_10290;Dbxref=NCBI_GP:MCP9537933.1;Name=MCP9537933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370723.1;locus_tag=NND05_10290;product=transglycosylase SLT domain-containing protein;protein_id=MCP9537933.1;transl_table=11 JANDXE010000020.1 Genbank gene 31786 32637 . + . ID=gene-NND05_10295;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=NND05_10295 JANDXE010000020.1 Protein Homology CDS 31786 32637 . + 0 ID=cds-MCP9537934.1;Parent=gene-NND05_10295;Dbxref=NCBI_GP:MCP9537934.1;Name=MCP9537934.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008760516.1;locus_tag=NND05_10295;product=ATP phosphoribosyltransferase;protein_id=MCP9537934.1;transl_table=11 JANDXE010000020.1 Genbank gene 32693 33976 . + . ID=gene-NND05_10300;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=NND05_10300 JANDXE010000020.1 Protein Homology CDS 32693 33976 . + 0 ID=cds-MCP9537935.1;Parent=gene-NND05_10300;Dbxref=NCBI_GP:MCP9537935.1;Name=MCP9537935.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005843310.1;locus_tag=NND05_10300;product=histidinol dehydrogenase;protein_id=MCP9537935.1;transl_table=11 JANDXE010000020.1 Genbank gene 33986 35020 . + . ID=gene-NND05_10305;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NND05_10305 JANDXE010000020.1 Protein Homology CDS 33986 35020 . + 0 ID=cds-MCP9537936.1;Parent=gene-NND05_10305;Dbxref=NCBI_GP:MCP9537936.1;Name=MCP9537936.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846637.1;locus_tag=NND05_10305;product=histidinol-phosphate transaminase;protein_id=MCP9537936.1;transl_table=11 JANDXE010000020.1 Genbank gene 35309 37690 . - . ID=gene-NND05_10310;Name=NND05_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10310 JANDXE010000020.1 Protein Homology CDS 35309 37690 . - 0 ID=cds-MCP9537937.1;Parent=gene-NND05_10310;Dbxref=NCBI_GP:MCP9537937.1;Name=MCP9537937.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846635.1;locus_tag=NND05_10310;product=YgiQ family radical SAM protein;protein_id=MCP9537937.1;transl_table=11 JANDXE010000020.1 Genbank gene 37701 38042 . - . ID=gene-NND05_10315;Name=NND05_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10315 JANDXE010000020.1 Protein Homology CDS 37701 38042 . - 0 ID=cds-MCP9537938.1;Parent=gene-NND05_10315;Dbxref=NCBI_GP:MCP9537938.1;Name=MCP9537938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846634.1;locus_tag=NND05_10315;product=hypothetical protein;protein_id=MCP9537938.1;transl_table=11 JANDXE010000020.1 Genbank gene 38149 40815 . - . ID=gene-NND05_10320;Name=NND05_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10320 JANDXE010000020.1 Protein Homology CDS 38149 40815 . - 0 ID=cds-MCP9537939.1;Parent=gene-NND05_10320;Dbxref=NCBI_GP:MCP9537939.1;Name=MCP9537939.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412006.1;locus_tag=NND05_10320;product=fibronectin type III domain-containing protein;protein_id=MCP9537939.1;transl_table=11 JANDXE010000020.1 Genbank gene 40940 41497 . - . ID=gene-NND05_10325;Name=NND05_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10325 JANDXE010000020.1 Protein Homology CDS 40940 41497 . - 0 ID=cds-MCP9537940.1;Parent=gene-NND05_10325;Dbxref=NCBI_GP:MCP9537940.1;Name=MCP9537940.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846632.1;locus_tag=NND05_10325;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=MCP9537940.1;transl_table=11 JANDXE010000020.1 Genbank gene 41564 41836 . - . ID=gene-NND05_10330;Name=NND05_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10330 JANDXE010000020.1 Protein Homology CDS 41564 41836 . - 0 ID=cds-MCP9537941.1;Parent=gene-NND05_10330;Dbxref=NCBI_GP:MCP9537941.1;Name=MCP9537941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574013.1;locus_tag=NND05_10330;product=hypothetical protein;protein_id=MCP9537941.1;transl_table=11 JANDXE010000020.1 Genbank gene 42034 43683 . + . ID=gene-NND05_10335;Name=NND05_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10335 JANDXE010000020.1 Protein Homology CDS 42034 43683 . + 0 ID=cds-MCP9537942.1;Parent=gene-NND05_10335;Dbxref=NCBI_GP:MCP9537942.1;Name=MCP9537942.1;Ontology_term=GO:0006096,GO:0047334;gbkey=CDS;go_function=diphosphate-fructose-6-phosphate 1-phosphotransferase activity|0047334||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007570582.1;locus_tag=NND05_10335;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=MCP9537942.1;transl_table=11 JANDXE010000020.1 Genbank gene 43706 44617 . + . ID=gene-NND05_10340;Name=NND05_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10340 JANDXE010000020.1 Protein Homology CDS 43706 44617 . + 0 ID=cds-MCP9537943.1;Parent=gene-NND05_10340;Dbxref=NCBI_GP:MCP9537943.1;Name=MCP9537943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370879.1;locus_tag=NND05_10340;product=glycoside hydrolase family 25 protein;protein_id=MCP9537943.1;transl_table=11 JANDXE010000020.1 Genbank gene 44690 45562 . - . ID=gene-NND05_10345;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=NND05_10345 JANDXE010000020.1 Protein Homology CDS 44690 45562 . - 0 ID=cds-MCP9537944.1;Parent=gene-NND05_10345;Dbxref=NCBI_GP:MCP9537944.1;Name=MCP9537944.1;Ontology_term=GO:0006479,GO:0008276;gbkey=CDS;gene=prmA;go_function=protein methyltransferase activity|0008276||IEA;go_process=protein methylation|0006479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846628.1;locus_tag=NND05_10345;product=50S ribosomal protein L11 methyltransferase;protein_id=MCP9537944.1;transl_table=11 JANDXE010000020.1 Genbank gene 45754 46749 . + . ID=gene-NND05_10350;Name=NND05_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10350 JANDXE010000020.1 Protein Homology CDS 45754 46749 . + 0 ID=cds-MCP9537945.1;Parent=gene-NND05_10350;Dbxref=NCBI_GP:MCP9537945.1;Name=MCP9537945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376340.1;locus_tag=NND05_10350;product=hypothetical protein;protein_id=MCP9537945.1;transl_table=11 JANDXE010000020.1 Genbank gene 46941 48575 . + . ID=gene-NND05_10355;Name=NND05_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10355 JANDXE010000020.1 Protein Homology CDS 46941 48575 . + 0 ID=cds-MCP9537946.1;Parent=gene-NND05_10355;Dbxref=NCBI_GP:MCP9537946.1;Name=MCP9537946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846625.1;locus_tag=NND05_10355;product=hemin receptor;protein_id=MCP9537946.1;transl_table=11 JANDXE010000020.1 Genbank gene 48949 49041 . - . ID=gene-NND05_10360;Name=NND05_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10360 JANDXE010000020.1 Protein Homology CDS 48949 49041 . - 0 ID=cds-MCP9537947.1;Parent=gene-NND05_10360;Dbxref=NCBI_GP:MCP9537947.1;Name=MCP9537947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005681203.1;locus_tag=NND05_10360;product=smalltalk protein;protein_id=MCP9537947.1;transl_table=11 JANDXE010000020.1 Genbank gene 49193 49915 . - . ID=gene-NND05_10365;Name=NND05_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10365 JANDXE010000020.1 Protein Homology CDS 49193 49915 . - 0 ID=cds-MCP9537948.1;Parent=gene-NND05_10365;Dbxref=NCBI_GP:MCP9537948.1;Name=MCP9537948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847114.1;locus_tag=NND05_10365;product=DNA-binding protein;protein_id=MCP9537948.1;transl_table=11 JANDXE010000020.1 Genbank gene 50539 51033 . - . ID=gene-NND05_10370;Name=NND05_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10370 JANDXE010000020.1 GeneMarkS-2+ CDS 50539 51033 . - 0 ID=cds-MCP9537949.1;Parent=gene-NND05_10370;Dbxref=NCBI_GP:MCP9537949.1;Name=MCP9537949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10370;product=hypothetical protein;protein_id=MCP9537949.1;transl_table=11 JANDXE010000020.1 Genbank gene 51318 52220 . + . ID=gene-NND05_10375;Name=NND05_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10375 JANDXE010000020.1 GeneMarkS-2+ CDS 51318 52220 . + 0 ID=cds-MCP9537950.1;Parent=gene-NND05_10375;Dbxref=NCBI_GP:MCP9537950.1;Name=MCP9537950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10375;product=hypothetical protein;protein_id=MCP9537950.1;transl_table=11 JANDXE010000020.1 Genbank gene 52201 52773 . - . ID=gene-NND05_10380;Name=NND05_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10380 JANDXE010000020.1 Protein Homology CDS 52201 52773 . - 0 ID=cds-MCP9537951.1;Parent=gene-NND05_10380;Dbxref=NCBI_GP:MCP9537951.1;Name=MCP9537951.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_10380;product=tyrosine-type recombinase/integrase;protein_id=MCP9537951.1;transl_table=11 JANDXE010000020.1 Genbank gene 52933 53136 . + . ID=gene-NND05_10385;Name=NND05_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10385 JANDXE010000020.1 Protein Homology CDS 52933 53136 . + 0 ID=cds-MCP9537952.1;Parent=gene-NND05_10385;Dbxref=NCBI_GP:MCP9537952.1;Name=MCP9537952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.2;locus_tag=NND05_10385;product=helix-turn-helix transcriptional regulator;protein_id=MCP9537952.1;transl_table=11 JANDXE010000020.1 Genbank gene 53139 54152 . + . ID=gene-NND05_10390;Name=NND05_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10390 JANDXE010000020.1 Protein Homology CDS 53139 54152 . + 0 ID=cds-MCP9537953.1;Parent=gene-NND05_10390;Dbxref=NCBI_GP:MCP9537953.1;Name=MCP9537953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008653042.1;locus_tag=NND05_10390;product=DNA cytosine methyltransferase;protein_id=MCP9537953.1;transl_table=11 JANDXE010000020.1 Genbank gene 54179 55543 . + . ID=gene-NND05_10395;Name=NND05_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10395 JANDXE010000020.1 Protein Homology CDS 54179 55543 . + 0 ID=cds-MCP9537954.1;Parent=gene-NND05_10395;Dbxref=NCBI_GP:MCP9537954.1;Name=MCP9537954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004310585.1;locus_tag=NND05_10395;product=DNA cytosine methyltransferase;protein_id=MCP9537954.1;transl_table=11 JANDXE010000020.1 Genbank gene 56014 56424 . + . ID=gene-NND05_10400;Name=NND05_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10400 JANDXE010000020.1 GeneMarkS-2+ CDS 56014 56424 . + 0 ID=cds-MCP9537955.1;Parent=gene-NND05_10400;Dbxref=NCBI_GP:MCP9537955.1;Name=MCP9537955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10400;product=hypothetical protein;protein_id=MCP9537955.1;transl_table=11 JANDXE010000020.1 Genbank gene 56688 56849 . + . ID=gene-NND05_10405;Name=NND05_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10405 JANDXE010000020.1 GeneMarkS-2+ CDS 56688 56849 . + 0 ID=cds-MCP9537956.1;Parent=gene-NND05_10405;Dbxref=NCBI_GP:MCP9537956.1;Name=MCP9537956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10405;product=hypothetical protein;protein_id=MCP9537956.1;transl_table=11 JANDXE010000020.1 Genbank gene 56825 57247 . + . ID=gene-NND05_10410;Name=NND05_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10410 JANDXE010000020.1 GeneMarkS-2+ CDS 56825 57247 . + 0 ID=cds-MCP9537957.1;Parent=gene-NND05_10410;Dbxref=NCBI_GP:MCP9537957.1;Name=MCP9537957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10410;product=hypothetical protein;protein_id=MCP9537957.1;transl_table=11 JANDXE010000020.1 Genbank gene 57412 57942 . + . ID=gene-NND05_10415;Name=NND05_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10415 JANDXE010000020.1 GeneMarkS-2+ CDS 57412 57942 . + 0 ID=cds-MCP9537958.1;Parent=gene-NND05_10415;Dbxref=NCBI_GP:MCP9537958.1;Name=MCP9537958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10415;product=hypothetical protein;protein_id=MCP9537958.1;transl_table=11 JANDXE010000020.1 Genbank gene 57976 58368 . + . ID=gene-NND05_10420;Name=NND05_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10420 JANDXE010000020.1 Protein Homology CDS 57976 58368 . + 0 ID=cds-MCP9537959.1;Parent=gene-NND05_10420;Dbxref=NCBI_GP:MCP9537959.1;Name=MCP9537959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849332.1;locus_tag=NND05_10420;product=hypothetical protein;protein_id=MCP9537959.1;transl_table=11 JANDXE010000020.1 Genbank gene 58391 60838 . + . ID=gene-NND05_10425;Name=NND05_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10425 JANDXE010000020.1 Protein Homology CDS 58391 60838 . + 0 ID=cds-MCP9537960.1;Parent=gene-NND05_10425;Dbxref=NCBI_GP:MCP9537960.1;Name=MCP9537960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849331.1;locus_tag=NND05_10425;product=hypothetical protein;protein_id=MCP9537960.1;transl_table=11 JANDXE010000020.1 Genbank gene 60875 61435 . + . ID=gene-NND05_10430;Name=NND05_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10430 JANDXE010000020.1 Protein Homology CDS 60875 61435 . + 0 ID=cds-MCP9537961.1;Parent=gene-NND05_10430;Dbxref=NCBI_GP:MCP9537961.1;Name=MCP9537961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063724.1;locus_tag=NND05_10430;product=DUF5675 family protein;protein_id=MCP9537961.1;transl_table=11 JANDXE010000020.1 Genbank gene 61503 61575 . - . ID=gene-NND05_10435;Name=NND05_10435;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10435 JANDXE010000020.1 tRNAscan-SE tRNA 61503 61575 . - . ID=rna-NND05_10435;Parent=gene-NND05_10435;anticodon=(pos:complement(61540..61542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10435;product=tRNA-Lys JANDXE010000020.1 tRNAscan-SE exon 61503 61575 . - . ID=exon-NND05_10435-1;Parent=rna-NND05_10435;anticodon=(pos:complement(61540..61542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10435;product=tRNA-Lys JANDXE010000020.1 Genbank gene 61619 61692 . - . ID=gene-NND05_10440;Name=NND05_10440;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10440 JANDXE010000020.1 tRNAscan-SE tRNA 61619 61692 . - . ID=rna-NND05_10440;Parent=gene-NND05_10440;anticodon=(pos:complement(61656..61658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10440;product=tRNA-Arg JANDXE010000020.1 tRNAscan-SE exon 61619 61692 . - . ID=exon-NND05_10440-1;Parent=rna-NND05_10440;anticodon=(pos:complement(61656..61658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10440;product=tRNA-Arg JANDXE010000020.1 Genbank gene 61715 61787 . - . ID=gene-NND05_10445;Name=NND05_10445;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10445 JANDXE010000020.1 tRNAscan-SE tRNA 61715 61787 . - . ID=rna-NND05_10445;Parent=gene-NND05_10445;anticodon=(pos:complement(61752..61754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10445;product=tRNA-Lys JANDXE010000020.1 tRNAscan-SE exon 61715 61787 . - . ID=exon-NND05_10445-1;Parent=rna-NND05_10445;anticodon=(pos:complement(61752..61754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10445;product=tRNA-Lys JANDXE010000020.1 Genbank gene 61821 61894 . - . ID=gene-NND05_10450;Name=NND05_10450;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10450 JANDXE010000020.1 tRNAscan-SE tRNA 61821 61894 . - . ID=rna-NND05_10450;Parent=gene-NND05_10450;anticodon=(pos:complement(61858..61860));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10450;product=tRNA-Arg JANDXE010000020.1 tRNAscan-SE exon 61821 61894 . - . ID=exon-NND05_10450-1;Parent=rna-NND05_10450;anticodon=(pos:complement(61858..61860));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10450;product=tRNA-Arg JANDXE010000020.1 Genbank gene 61936 62009 . - . ID=gene-NND05_10455;Name=NND05_10455;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10455 JANDXE010000020.1 tRNAscan-SE tRNA 61936 62009 . - . ID=rna-NND05_10455;Parent=gene-NND05_10455;anticodon=(pos:complement(61973..61975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10455;product=tRNA-Arg JANDXE010000020.1 tRNAscan-SE exon 61936 62009 . - . ID=exon-NND05_10455-1;Parent=rna-NND05_10455;anticodon=(pos:complement(61973..61975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10455;product=tRNA-Arg JANDXE010000020.1 Genbank gene 62034 62106 . - . ID=gene-NND05_10460;Name=NND05_10460;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10460 JANDXE010000020.1 tRNAscan-SE tRNA 62034 62106 . - . ID=rna-NND05_10460;Parent=gene-NND05_10460;anticodon=(pos:complement(62071..62073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10460;product=tRNA-Lys JANDXE010000020.1 tRNAscan-SE exon 62034 62106 . - . ID=exon-NND05_10460-1;Parent=rna-NND05_10460;anticodon=(pos:complement(62071..62073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10460;product=tRNA-Lys JANDXE010000020.1 Genbank gene 62191 63939 . - . ID=gene-NND05_10465;Name=NND05_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10465 JANDXE010000020.1 Protein Homology CDS 62191 63939 . - 0 ID=cds-MCP9537962.1;Parent=gene-NND05_10465;Dbxref=NCBI_GP:MCP9537962.1;Name=MCP9537962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919216.1;locus_tag=NND05_10465;product=family 10 glycosylhydrolase;protein_id=MCP9537962.1;transl_table=11 JANDXE010000020.1 Genbank gene 64078 65622 . + . ID=gene-NND05_10470;Name=NND05_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10470 JANDXE010000020.1 Protein Homology CDS 64078 65622 . + 0 ID=cds-MCP9537963.1;Parent=gene-NND05_10470;Dbxref=NCBI_GP:MCP9537963.1;Name=MCP9537963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574061.1;locus_tag=NND05_10470;product=carbon starvation protein A;protein_id=MCP9537963.1;transl_table=11 JANDXE010000020.1 Genbank gene 65625 66116 . + . ID=gene-NND05_10475;Name=NND05_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10475 JANDXE010000020.1 Protein Homology CDS 65625 66116 . + 0 ID=cds-MCP9537964.1;Parent=gene-NND05_10475;Dbxref=NCBI_GP:MCP9537964.1;Name=MCP9537964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846763.1;locus_tag=NND05_10475;product=outer membrane beta-barrel protein;protein_id=MCP9537964.1;transl_table=11 JANDXE010000020.1 Genbank gene 66121 66732 . + . ID=gene-NND05_10480;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=NND05_10480 JANDXE010000020.1 Protein Homology CDS 66121 66732 . + 0 ID=cds-MCP9537965.1;Parent=gene-NND05_10480;Dbxref=NCBI_GP:MCP9537965.1;Name=MCP9537965.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133351.1;locus_tag=NND05_10480;product=recombination mediator RecR;protein_id=MCP9537965.1;transl_table=11 JANDXE010000020.1 Genbank gene 66739 67173 . + . ID=gene-NND05_10485;Name=NND05_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10485 JANDXE010000020.1 GeneMarkS-2+ CDS 66739 67173 . + 0 ID=cds-MCP9537966.1;Parent=gene-NND05_10485;Dbxref=NCBI_GP:MCP9537966.1;Name=MCP9537966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10485;product=hypothetical protein;protein_id=MCP9537966.1;transl_table=11 JANDXE010000020.1 Genbank gene 67215 68366 . + . ID=gene-NND05_10490;Name=NND05_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10490 JANDXE010000020.1 Protein Homology CDS 67215 68366 . + 0 ID=cds-MCP9537967.1;Parent=gene-NND05_10490;Dbxref=NCBI_GP:MCP9537967.1;Name=MCP9537967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846760.1;locus_tag=NND05_10490;product=glycosyltransferase family 2 protein;protein_id=MCP9537967.1;transl_table=11 JANDXE010000020.1 Genbank gene 68432 68941 . + . ID=gene-NND05_10495;Name=NND05_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10495 JANDXE010000020.1 Protein Homology CDS 68432 68941 . + 0 ID=cds-MCP9537968.1;Parent=gene-NND05_10495;Dbxref=NCBI_GP:MCP9537968.1;Name=MCP9537968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846759.1;locus_tag=NND05_10495;product=GNAT family N-acetyltransferase;protein_id=MCP9537968.1;transl_table=11 JANDXE010000020.1 Genbank gene 69041 69114 . + . ID=gene-NND05_10500;Name=NND05_10500;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10500 JANDXE010000020.1 tRNAscan-SE tRNA 69041 69114 . + . ID=rna-NND05_10500;Parent=gene-NND05_10500;anticodon=(pos:69075..69077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10500;product=tRNA-Asp JANDXE010000020.1 tRNAscan-SE exon 69041 69114 . + . ID=exon-NND05_10500-1;Parent=rna-NND05_10500;anticodon=(pos:69075..69077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10500;product=tRNA-Asp JANDXE010000020.1 Genbank gene 69154 69227 . + . ID=gene-NND05_10505;Name=NND05_10505;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10505 JANDXE010000020.1 tRNAscan-SE tRNA 69154 69227 . + . ID=rna-NND05_10505;Parent=gene-NND05_10505;anticodon=(pos:69188..69190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10505;product=tRNA-Asp JANDXE010000020.1 tRNAscan-SE exon 69154 69227 . + . ID=exon-NND05_10505-1;Parent=rna-NND05_10505;anticodon=(pos:69188..69190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10505;product=tRNA-Asp JANDXE010000020.1 Genbank gene 69265 69341 . + . ID=gene-NND05_10510;Name=NND05_10510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10510 JANDXE010000020.1 tRNAscan-SE tRNA 69265 69341 . + . ID=rna-NND05_10510;Parent=gene-NND05_10510;anticodon=(pos:69299..69301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10510;product=tRNA-Asp JANDXE010000020.1 tRNAscan-SE exon 69265 69341 . + . ID=exon-NND05_10510-1;Parent=rna-NND05_10510;anticodon=(pos:69299..69301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10510;product=tRNA-Asp JANDXE010000020.1 Genbank gene 69371 69444 . + . ID=gene-NND05_10515;Name=NND05_10515;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10515 JANDXE010000020.1 tRNAscan-SE tRNA 69371 69444 . + . ID=rna-NND05_10515;Parent=gene-NND05_10515;anticodon=(pos:69405..69407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10515;product=tRNA-Asp JANDXE010000020.1 tRNAscan-SE exon 69371 69444 . + . ID=exon-NND05_10515-1;Parent=rna-NND05_10515;anticodon=(pos:69405..69407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10515;product=tRNA-Asp JANDXE010000020.1 Genbank gene 69687 71117 . + . ID=gene-NND05_10520;Name=NND05_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10520 JANDXE010000020.1 Protein Homology CDS 69687 71117 . + 0 ID=cds-MCP9537969.1;Parent=gene-NND05_10520;Dbxref=NCBI_GP:MCP9537969.1;Name=MCP9537969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016665230.1;locus_tag=NND05_10520;product=sodium:solute symporter;protein_id=MCP9537969.1;transl_table=11 JANDXE010000020.1 Genbank gene 71289 73316 . + . ID=gene-NND05_10525;Name=NND05_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10525 JANDXE010000020.1 Protein Homology CDS 71289 73316 . + 0 ID=cds-MCP9537970.1;Parent=gene-NND05_10525;Dbxref=NCBI_GP:MCP9537970.1;Name=MCP9537970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006043806.1;locus_tag=NND05_10525;product=M13 family metallopeptidase;protein_id=MCP9537970.1;transl_table=11 ##sequence-region JANDXE010000001.1 1 337098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000001.1 Genbank region 1 337098 . + . ID=JANDXE010000001.1:1..337098;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000001.1 Genbank gene 1 1108 . - . ID=gene-NND05_00005;Name=NND05_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00005;partial=true;start_range=.,1 JANDXE010000001.1 Protein Homology CDS 1 1108 . - 0 ID=cds-MCP9535952.1;Parent=gene-NND05_00005;Dbxref=NCBI_GP:MCP9535952.1;Name=MCP9535952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013235.2;locus_tag=NND05_00005;partial=true;product=replication initiation protein;protein_id=MCP9535952.1;start_range=.,1;transl_table=11 JANDXE010000001.1 Genbank gene 2179 2841 . + . ID=gene-NND05_00010;Name=NND05_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00010 JANDXE010000001.1 Protein Homology CDS 2179 2841 . + 0 ID=cds-MCP9535953.1;Parent=gene-NND05_00010;Dbxref=NCBI_GP:MCP9535953.1;Name=MCP9535953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846249.1;locus_tag=NND05_00010;product=DNA-binding protein;protein_id=MCP9535953.1;transl_table=11 JANDXE010000001.1 Genbank gene 2869 2973 . + . ID=gene-NND05_00015;Name=NND05_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00015 JANDXE010000001.1 Protein Homology CDS 2869 2973 . + 0 ID=cds-MCP9535954.1;Parent=gene-NND05_00015;Dbxref=NCBI_GP:MCP9535954.1;Name=MCP9535954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_00015;product=smalltalk protein;protein_id=MCP9535954.1;transl_table=11 JANDXE010000001.1 Genbank gene 3027 3452 . + . ID=gene-NND05_00020;Name=NND05_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00020 JANDXE010000001.1 Protein Homology CDS 3027 3452 . + 0 ID=cds-MCP9535955.1;Parent=gene-NND05_00020;Dbxref=NCBI_GP:MCP9535955.1;Name=MCP9535955.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846248.1;locus_tag=NND05_00020;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9535955.1;transl_table=11 JANDXE010000001.1 Genbank gene 3625 4527 . + . ID=gene-NND05_00025;Name=NND05_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00025 JANDXE010000001.1 Protein Homology CDS 3625 4527 . + 0 ID=cds-MCP9535956.1;Parent=gene-NND05_00025;Dbxref=NCBI_GP:MCP9535956.1;Name=MCP9535956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846246.1;locus_tag=NND05_00025;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9535956.1;transl_table=11 JANDXE010000001.1 Genbank gene 5183 5611 . - . ID=gene-NND05_00030;Name=NND05_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00030 JANDXE010000001.1 GeneMarkS-2+ CDS 5183 5611 . - 0 ID=cds-MCP9535957.1;Parent=gene-NND05_00030;Dbxref=NCBI_GP:MCP9535957.1;Name=MCP9535957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00030;product=hypothetical protein;protein_id=MCP9535957.1;transl_table=11 JANDXE010000001.1 Genbank gene 5984 7648 . - . ID=gene-NND05_00035;Name=NND05_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00035 JANDXE010000001.1 Protein Homology CDS 5984 7648 . - 0 ID=cds-MCP9535958.1;Parent=gene-NND05_00035;Dbxref=NCBI_GP:MCP9535958.1;Name=MCP9535958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024627.2;locus_tag=NND05_00035;product=right-handed parallel beta-helix repeat-containing protein;protein_id=MCP9535958.1;transl_table=11 JANDXE010000001.1 Genbank gene 7758 8234 . - . ID=gene-NND05_00040;Name=NND05_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00040 JANDXE010000001.1 Protein Homology CDS 7758 8234 . - 0 ID=cds-MCP9535959.1;Parent=gene-NND05_00040;Dbxref=NCBI_GP:MCP9535959.1;Name=MCP9535959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005791963.1;locus_tag=NND05_00040;product=hypothetical protein;protein_id=MCP9535959.1;transl_table=11 JANDXE010000001.1 Genbank gene 8265 10121 . - . ID=gene-NND05_00045;Name=NND05_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00045 JANDXE010000001.1 Protein Homology CDS 8265 10121 . - 0 ID=cds-MCP9535960.1;Parent=gene-NND05_00045;Dbxref=NCBI_GP:MCP9535960.1;Name=MCP9535960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224610.1;locus_tag=NND05_00045;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9535960.1;transl_table=11 JANDXE010000001.1 Genbank gene 10153 13269 . - . ID=gene-NND05_00050;Name=NND05_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00050 JANDXE010000001.1 Protein Homology CDS 10153 13269 . - 0 ID=cds-MCP9535961.1;Parent=gene-NND05_00050;Dbxref=NCBI_GP:MCP9535961.1;Name=MCP9535961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380582.1;locus_tag=NND05_00050;product=TonB-dependent receptor;protein_id=MCP9535961.1;transl_table=11 JANDXE010000001.1 Genbank gene 13624 14040 . + . ID=gene-NND05_00055;Name=NND05_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00055 JANDXE010000001.1 Protein Homology CDS 13624 14040 . + 0 ID=cds-MCP9535962.1;Parent=gene-NND05_00055;Dbxref=NCBI_GP:MCP9535962.1;Name=MCP9535962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849092.1;locus_tag=NND05_00055;product=transposase;protein_id=MCP9535962.1;transl_table=11 JANDXE010000001.1 Genbank gene 14082 14384 . + . ID=gene-NND05_00060;Name=NND05_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00060 JANDXE010000001.1 GeneMarkS-2+ CDS 14082 14384 . + 0 ID=cds-MCP9535963.1;Parent=gene-NND05_00060;Dbxref=NCBI_GP:MCP9535963.1;Name=MCP9535963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00060;product=hypothetical protein;protein_id=MCP9535963.1;transl_table=11 JANDXE010000001.1 Genbank gene 14446 15894 . - . ID=gene-NND05_00065;Name=NND05_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00065 JANDXE010000001.1 Protein Homology CDS 14446 15894 . - 0 ID=cds-MCP9535964.1;Parent=gene-NND05_00065;Dbxref=NCBI_GP:MCP9535964.1;Name=MCP9535964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009036672.1;locus_tag=NND05_00065;product=ATP-binding protein;protein_id=MCP9535964.1;transl_table=11 JANDXE010000001.1 Genbank gene 16094 16825 . - . ID=gene-NND05_00070;Name=NND05_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00070 JANDXE010000001.1 Protein Homology CDS 16094 16825 . - 0 ID=cds-MCP9535965.1;Parent=gene-NND05_00070;Dbxref=NCBI_GP:MCP9535965.1;Name=MCP9535965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343062.1;locus_tag=NND05_00070;product=HAD hydrolase-like protein;protein_id=MCP9535965.1;transl_table=11 JANDXE010000001.1 Genbank gene 16952 18556 . + . ID=gene-NND05_00075;Name=NND05_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00075 JANDXE010000001.1 Protein Homology CDS 16952 18556 . + 0 ID=cds-MCP9535966.1;Parent=gene-NND05_00075;Dbxref=NCBI_GP:MCP9535966.1;Name=MCP9535966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848291.1;locus_tag=NND05_00075;product=ATP-binding protein;protein_id=MCP9535966.1;transl_table=11 JANDXE010000001.1 Genbank pseudogene 18643 18765 . - . ID=gene-NND05_00080;Name=NND05_00080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_00080;pseudo=true JANDXE010000001.1 Protein Homology CDS 18643 18765 . - 0 ID=cds-NND05_00080;Parent=gene-NND05_00080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849311.1;locus_tag=NND05_00080;product=DUF2442 domain-containing protein;pseudo=true;transl_table=11 JANDXE010000001.1 Genbank gene 19492 20001 . - . ID=gene-NND05_00085;Name=NND05_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00085 JANDXE010000001.1 GeneMarkS-2+ CDS 19492 20001 . - 0 ID=cds-MCP9535967.1;Parent=gene-NND05_00085;Dbxref=NCBI_GP:MCP9535967.1;Name=MCP9535967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00085;product=hypothetical protein;protein_id=MCP9535967.1;transl_table=11 JANDXE010000001.1 Genbank gene 20027 20215 . - . ID=gene-NND05_00090;Name=NND05_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00090 JANDXE010000001.1 GeneMarkS-2+ CDS 20027 20215 . - 0 ID=cds-MCP9535968.1;Parent=gene-NND05_00090;Dbxref=NCBI_GP:MCP9535968.1;Name=MCP9535968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00090;product=hypothetical protein;protein_id=MCP9535968.1;transl_table=11 JANDXE010000001.1 Genbank gene 20236 20520 . - . ID=gene-NND05_00095;Name=NND05_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00095 JANDXE010000001.1 GeneMarkS-2+ CDS 20236 20520 . - 0 ID=cds-MCP9535969.1;Parent=gene-NND05_00095;Dbxref=NCBI_GP:MCP9535969.1;Name=MCP9535969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00095;product=hypothetical protein;protein_id=MCP9535969.1;transl_table=11 JANDXE010000001.1 Genbank gene 20641 21471 . - . ID=gene-NND05_00100;Name=NND05_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00100 JANDXE010000001.1 GeneMarkS-2+ CDS 20641 21471 . - 0 ID=cds-MCP9535970.1;Parent=gene-NND05_00100;Dbxref=NCBI_GP:MCP9535970.1;Name=MCP9535970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00100;product=hypothetical protein;protein_id=MCP9535970.1;transl_table=11 JANDXE010000001.1 Genbank gene 21509 22666 . - . ID=gene-NND05_00105;Name=NND05_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00105 JANDXE010000001.1 GeneMarkS-2+ CDS 21509 22666 . - 0 ID=cds-MCP9535971.1;Parent=gene-NND05_00105;Dbxref=NCBI_GP:MCP9535971.1;Name=MCP9535971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00105;product=hypothetical protein;protein_id=MCP9535971.1;transl_table=11 JANDXE010000001.1 Genbank gene 22701 23456 . - . ID=gene-NND05_00110;Name=NND05_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00110 JANDXE010000001.1 Protein Homology CDS 22701 23456 . - 0 ID=cds-MCP9535972.1;Parent=gene-NND05_00110;Dbxref=NCBI_GP:MCP9535972.1;Name=MCP9535972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024702.2;locus_tag=NND05_00110;product=leucine-rich repeat domain-containing protein;protein_id=MCP9535972.1;transl_table=11 JANDXE010000001.1 Genbank gene 23500 24090 . - . ID=gene-NND05_00115;Name=NND05_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00115 JANDXE010000001.1 Protein Homology CDS 23500 24090 . - 0 ID=cds-MCP9535973.1;Parent=gene-NND05_00115;Dbxref=NCBI_GP:MCP9535973.1;Name=MCP9535973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773798.1;locus_tag=NND05_00115;product=hypothetical protein;protein_id=MCP9535973.1;transl_table=11 JANDXE010000001.1 Genbank gene 24904 27150 . + . ID=gene-NND05_00120;Name=NND05_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00120 JANDXE010000001.1 Protein Homology CDS 24904 27150 . + 0 ID=cds-MCP9535974.1;Parent=gene-NND05_00120;Dbxref=NCBI_GP:MCP9535974.1;Name=MCP9535974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847221.1;locus_tag=NND05_00120;product=inorganic phosphate transporter;protein_id=MCP9535974.1;transl_table=11 JANDXE010000001.1 Genbank gene 27274 29448 . - . ID=gene-NND05_00125;Name=NND05_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00125 JANDXE010000001.1 Protein Homology CDS 27274 29448 . - 0 ID=cds-MCP9535975.1;Parent=gene-NND05_00125;Dbxref=NCBI_GP:MCP9535975.1;Name=MCP9535975.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=NND05_00125;product=Plug domain-containing protein;protein_id=MCP9535975.1;transl_table=11 JANDXE010000001.1 Genbank gene 29455 29880 . - . ID=gene-NND05_00130;Name=NND05_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00130 JANDXE010000001.1 GeneMarkS-2+ CDS 29455 29880 . - 0 ID=cds-MCP9535976.1;Parent=gene-NND05_00130;Dbxref=NCBI_GP:MCP9535976.1;Name=MCP9535976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00130;product=hypothetical protein;protein_id=MCP9535976.1;transl_table=11 JANDXE010000001.1 Genbank gene 30164 30571 . + . ID=gene-NND05_00135;Name=NND05_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00135 JANDXE010000001.1 Protein Homology CDS 30164 30571 . + 0 ID=cds-MCP9535977.1;Parent=gene-NND05_00135;Dbxref=NCBI_GP:MCP9535977.1;Name=MCP9535977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011541.1;locus_tag=NND05_00135;product=Hsp20/alpha crystallin family protein;protein_id=MCP9535977.1;transl_table=11 JANDXE010000001.1 Genbank gene 30854 31543 . + . ID=gene-NND05_00140;Name=NND05_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00140 JANDXE010000001.1 Protein Homology CDS 30854 31543 . + 0 ID=cds-MCP9535978.1;Parent=gene-NND05_00140;Dbxref=NCBI_GP:MCP9535978.1;Name=MCP9535978.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847220.1;locus_tag=NND05_00140;product=queuosine precursor transporter;protein_id=MCP9535978.1;transl_table=11 JANDXE010000001.1 Genbank gene 31611 32066 . + . ID=gene-NND05_00145;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NND05_00145 JANDXE010000001.1 Protein Homology CDS 31611 32066 . + 0 ID=cds-MCP9535979.1;Parent=gene-NND05_00145;Dbxref=NCBI_GP:MCP9535979.1;Name=MCP9535979.1;Ontology_term=GO:0033739;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910654.1;locus_tag=NND05_00145;product=preQ(1) synthase;protein_id=MCP9535979.1;transl_table=11 JANDXE010000001.1 Genbank gene 32375 33196 . - . ID=gene-NND05_00150;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=NND05_00150 JANDXE010000001.1 Protein Homology CDS 32375 33196 . - 0 ID=cds-MCP9535980.1;Parent=gene-NND05_00150;Dbxref=NCBI_GP:MCP9535980.1;Name=MCP9535980.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847218.1;locus_tag=NND05_00150;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=MCP9535980.1;transl_table=11 JANDXE010000001.1 Genbank gene 33193 34953 . - . ID=gene-NND05_00155;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=NND05_00155 JANDXE010000001.1 Protein Homology CDS 33193 34953 . - 0 ID=cds-MCP9535981.1;Parent=gene-NND05_00155;Dbxref=NCBI_GP:MCP9535981.1;Name=MCP9535981.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006950688.1;locus_tag=NND05_00155;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=MCP9535981.1;transl_table=11 JANDXE010000001.1 Genbank gene 35025 36071 . - . ID=gene-NND05_00160;Name=NND05_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00160 JANDXE010000001.1 Protein Homology CDS 35025 36071 . - 0 ID=cds-MCP9535982.1;Parent=gene-NND05_00160;Dbxref=NCBI_GP:MCP9535982.1;Name=MCP9535982.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364480.1;locus_tag=NND05_00160;product=isochorismate synthase;protein_id=MCP9535982.1;transl_table=11 JANDXE010000001.1 Genbank gene 36075 36527 . - . ID=gene-NND05_00165;Name=NND05_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00165 JANDXE010000001.1 Protein Homology CDS 36075 36527 . - 0 ID=cds-MCP9535983.1;Parent=gene-NND05_00165;Dbxref=NCBI_GP:MCP9535983.1;Name=MCP9535983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847215.1;locus_tag=NND05_00165;product=PaaI family thioesterase;protein_id=MCP9535983.1;transl_table=11 JANDXE010000001.1 Genbank gene 36739 39021 . + . ID=gene-NND05_00170;Name=NND05_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00170 JANDXE010000001.1 Protein Homology CDS 36739 39021 . + 0 ID=cds-MCP9535984.1;Parent=gene-NND05_00170;Dbxref=NCBI_GP:MCP9535984.1;Name=MCP9535984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463940.1;locus_tag=NND05_00170;product=alpha-N-acetylglucosaminidase;protein_id=MCP9535984.1;transl_table=11 JANDXE010000001.1 Genbank gene 39046 40170 . + . ID=gene-NND05_00175;Name=NND05_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00175 JANDXE010000001.1 Protein Homology CDS 39046 40170 . + 0 ID=cds-MCP9535985.1;Parent=gene-NND05_00175;Dbxref=NCBI_GP:MCP9535985.1;Name=MCP9535985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846257.1;locus_tag=NND05_00175;product=DUF5009 domain-containing protein;protein_id=MCP9535985.1;transl_table=11 JANDXE010000001.1 Genbank gene 40301 42031 . + . ID=gene-NND05_00180;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NND05_00180 JANDXE010000001.1 Protein Homology CDS 40301 42031 . + 0 ID=cds-MCP9535986.1;Parent=gene-NND05_00180;Dbxref=NCBI_GP:MCP9535986.1;Name=MCP9535986.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282270.1;locus_tag=NND05_00180;product=lysine--tRNA ligase;protein_id=MCP9535986.1;transl_table=11 JANDXE010000001.1 Genbank gene 42103 43101 . + . ID=gene-NND05_00185;Name=NND05_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00185 JANDXE010000001.1 Protein Homology CDS 42103 43101 . + 0 ID=cds-MCP9535987.1;Parent=gene-NND05_00185;Dbxref=NCBI_GP:MCP9535987.1;Name=MCP9535987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345723.1;locus_tag=NND05_00185;product=NAD(P)-binding domain-containing protein;protein_id=MCP9535987.1;transl_table=11 JANDXE010000001.1 Genbank gene 43145 44503 . + . ID=gene-NND05_00190;Name=NND05_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00190 JANDXE010000001.1 Protein Homology CDS 43145 44503 . + 0 ID=cds-MCP9535988.1;Parent=gene-NND05_00190;Dbxref=NCBI_GP:MCP9535988.1;Name=MCP9535988.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352060.1;locus_tag=NND05_00190;product=glucose-6-phosphate isomerase;protein_id=MCP9535988.1;transl_table=11 JANDXE010000001.1 Genbank gene 44507 45277 . + . ID=gene-NND05_00195;Name=NND05_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00195 JANDXE010000001.1 Protein Homology CDS 44507 45277 . + 0 ID=cds-MCP9535989.1;Parent=gene-NND05_00195;Dbxref=NCBI_GP:MCP9535989.1;Name=MCP9535989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847210.1;locus_tag=NND05_00195;product=HAD hydrolase-like protein;protein_id=MCP9535989.1;transl_table=11 JANDXE010000001.1 Genbank gene 45274 46656 . + . ID=gene-NND05_00200;Name=NND05_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00200 JANDXE010000001.1 Protein Homology CDS 45274 46656 . + 0 ID=cds-MCP9535990.1;Parent=gene-NND05_00200;Dbxref=NCBI_GP:MCP9535990.1;Name=MCP9535990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008669507.1;locus_tag=NND05_00200;product=alpha-L-fucosidase;protein_id=MCP9535990.1;transl_table=11 JANDXE010000001.1 Genbank gene 46783 48555 . + . ID=gene-NND05_00205;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=NND05_00205 JANDXE010000001.1 Protein Homology CDS 46783 48555 . + 0 ID=cds-MCP9535991.1;Parent=gene-NND05_00205;Dbxref=NCBI_GP:MCP9535991.1;Name=MCP9535991.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010991938.1;locus_tag=NND05_00205;product=L-fucose isomerase;protein_id=MCP9535991.1;transl_table=11 JANDXE010000001.1 Genbank gene 48605 49240 . + . ID=gene-NND05_00210;Name=NND05_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00210 JANDXE010000001.1 Protein Homology CDS 48605 49240 . + 0 ID=cds-MCP9535992.1;Parent=gene-NND05_00210;Dbxref=NCBI_GP:MCP9535992.1;Name=MCP9535992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007902935.1;locus_tag=NND05_00210;product=class II aldolase/adducin family protein;protein_id=MCP9535992.1;transl_table=11 JANDXE010000001.1 Genbank gene 49356 50747 . + . ID=gene-NND05_00215;Name=NND05_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00215 JANDXE010000001.1 Protein Homology CDS 49356 50747 . + 0 ID=cds-MCP9535993.1;Parent=gene-NND05_00215;Dbxref=NCBI_GP:MCP9535993.1;Name=MCP9535993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008999655.1;locus_tag=NND05_00215;product=rhamnulokinase;protein_id=MCP9535993.1;transl_table=11 JANDXE010000001.1 Genbank gene 50802 52130 . + . ID=gene-NND05_00220;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NND05_00220 JANDXE010000001.1 Protein Homology CDS 50802 52130 . + 0 ID=cds-MCP9535994.1;Parent=gene-NND05_00220;Dbxref=NCBI_GP:MCP9535994.1;Name=MCP9535994.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124055.1;locus_tag=NND05_00220;product=L-fucose:H+ symporter permease;protein_id=MCP9535994.1;transl_table=11 JANDXE010000001.1 Genbank gene 52384 55815 . + . ID=gene-NND05_00225;Name=NND05_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00225 JANDXE010000001.1 Protein Homology CDS 52384 55815 . + 0 ID=cds-MCP9535995.1;Parent=gene-NND05_00225;Dbxref=NCBI_GP:MCP9535995.1;Name=MCP9535995.1;Ontology_term=GO:0071702,GO:0022857,GO:0045203;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=organic substance transport|0071702||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547074.1;locus_tag=NND05_00225;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=MCP9535995.1;transl_table=11 JANDXE010000001.1 Genbank gene 55852 57573 . + . ID=gene-NND05_00230;Name=NND05_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00230 JANDXE010000001.1 Protein Homology CDS 55852 57573 . + 0 ID=cds-MCP9535996.1;Parent=gene-NND05_00230;Dbxref=NCBI_GP:MCP9535996.1;Name=MCP9535996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919510.1;locus_tag=NND05_00230;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=MCP9535996.1;transl_table=11 JANDXE010000001.1 Genbank gene 58139 59029 . - . ID=gene-NND05_00235;Name=NND05_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00235 JANDXE010000001.1 Protein Homology CDS 58139 59029 . - 0 ID=cds-MCP9535997.1;Parent=gene-NND05_00235;Dbxref=NCBI_GP:MCP9535997.1;Name=MCP9535997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007758574.1;locus_tag=NND05_00235;product=Abi family protein;protein_id=MCP9535997.1;transl_table=11 JANDXE010000001.1 Genbank gene 59405 62068 . - . ID=gene-NND05_00240;Name=NND05_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00240 JANDXE010000001.1 Protein Homology CDS 59405 62068 . - 0 ID=cds-MCP9535998.1;Parent=gene-NND05_00240;Dbxref=NCBI_GP:MCP9535998.1;Name=MCP9535998.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008650730.1;locus_tag=NND05_00240;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=MCP9535998.1;transl_table=11 JANDXE010000001.1 Genbank gene 62351 63757 . + . ID=gene-NND05_00245;Name=NND05_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00245 JANDXE010000001.1 Protein Homology CDS 62351 63757 . + 0 ID=cds-MCP9535999.1;Parent=gene-NND05_00245;Dbxref=NCBI_GP:MCP9535999.1;Name=MCP9535999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901831.1;locus_tag=NND05_00245;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9535999.1;transl_table=11 JANDXE010000001.1 Genbank gene 64052 64294 . + . ID=gene-NND05_00250;Name=NND05_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00250 JANDXE010000001.1 GeneMarkS-2+ CDS 64052 64294 . + 0 ID=cds-MCP9536000.1;Parent=gene-NND05_00250;Dbxref=NCBI_GP:MCP9536000.1;Name=MCP9536000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00250;product=hypothetical protein;protein_id=MCP9536000.1;transl_table=11 JANDXE010000001.1 Genbank gene 64515 66962 . + . ID=gene-NND05_00255;Name=NND05_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00255 JANDXE010000001.1 Protein Homology CDS 64515 66962 . + 0 ID=cds-MCP9536001.1;Parent=gene-NND05_00255;Dbxref=NCBI_GP:MCP9536001.1;Name=MCP9536001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_00255;product=ATP-binding protein;protein_id=MCP9536001.1;transl_table=11 JANDXE010000001.1 Genbank gene 66919 67830 . - . ID=gene-NND05_00260;Name=NND05_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00260 JANDXE010000001.1 Protein Homology CDS 66919 67830 . - 0 ID=cds-MCP9536002.1;Parent=gene-NND05_00260;Dbxref=NCBI_GP:MCP9536002.1;Name=MCP9536002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=NND05_00260;product=helix-turn-helix domain-containing protein;protein_id=MCP9536002.1;transl_table=11 JANDXE010000001.1 Genbank gene 68015 69367 . + . ID=gene-NND05_00265;Name=NND05_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00265 JANDXE010000001.1 Protein Homology CDS 68015 69367 . + 0 ID=cds-MCP9536003.1;Parent=gene-NND05_00265;Dbxref=NCBI_GP:MCP9536003.1;Name=MCP9536003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281387.1;locus_tag=NND05_00265;product=TolC family protein;protein_id=MCP9536003.1;transl_table=11 JANDXE010000001.1 Genbank gene 69441 70481 . + . ID=gene-NND05_00270;Name=NND05_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00270 JANDXE010000001.1 Protein Homology CDS 69441 70481 . + 0 ID=cds-MCP9536004.1;Parent=gene-NND05_00270;Dbxref=NCBI_GP:MCP9536004.1;Name=MCP9536004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018711185.1;locus_tag=NND05_00270;product=HlyD family secretion protein;protein_id=MCP9536004.1;transl_table=11 JANDXE010000001.1 Genbank gene 70533 72059 . + . ID=gene-NND05_00275;Name=NND05_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00275 JANDXE010000001.1 Protein Homology CDS 70533 72059 . + 0 ID=cds-MCP9536005.1;Parent=gene-NND05_00275;Dbxref=NCBI_GP:MCP9536005.1;Name=MCP9536005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281389.1;locus_tag=NND05_00275;product=hypothetical protein;protein_id=MCP9536005.1;transl_table=11 JANDXE010000001.1 Genbank gene 72197 72919 . + . ID=gene-NND05_00280;Name=NND05_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00280 JANDXE010000001.1 Protein Homology CDS 72197 72919 . + 0 ID=cds-MCP9536006.1;Parent=gene-NND05_00280;Dbxref=NCBI_GP:MCP9536006.1;Name=MCP9536006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847441.1;locus_tag=NND05_00280;product=phosphatase;protein_id=MCP9536006.1;transl_table=11 JANDXE010000001.1 Genbank gene 72956 73498 . + . ID=gene-NND05_00285;Name=NND05_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00285 JANDXE010000001.1 Protein Homology CDS 72956 73498 . + 0 ID=cds-MCP9536007.1;Parent=gene-NND05_00285;Dbxref=NCBI_GP:MCP9536007.1;Name=MCP9536007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282648.1;locus_tag=NND05_00285;product=carbonic anhydrase;protein_id=MCP9536007.1;transl_table=11 JANDXE010000001.1 Genbank gene 73559 74191 . - . ID=gene-NND05_00290;Name=NND05_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00290 JANDXE010000001.1 Protein Homology CDS 73559 74191 . - 0 ID=cds-MCP9536008.1;Parent=gene-NND05_00290;Dbxref=NCBI_GP:MCP9536008.1;Name=MCP9536008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_00290;product=response regulator transcription factor;protein_id=MCP9536008.1;transl_table=11 JANDXE010000001.1 Genbank gene 74239 76086 . - . ID=gene-NND05_00295;Name=NND05_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00295 JANDXE010000001.1 Protein Homology CDS 74239 76086 . - 0 ID=cds-MCP9536009.1;Parent=gene-NND05_00295;Dbxref=NCBI_GP:MCP9536009.1;Name=MCP9536009.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.2;locus_tag=NND05_00295;product=histidine kinase;protein_id=MCP9536009.1;transl_table=11 JANDXE010000001.1 Genbank gene 76436 76600 . + . ID=gene-NND05_00300;Name=NND05_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00300 JANDXE010000001.1 GeneMarkS-2+ CDS 76436 76600 . + 0 ID=cds-MCP9536010.1;Parent=gene-NND05_00300;Dbxref=NCBI_GP:MCP9536010.1;Name=MCP9536010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00300;product=hypothetical protein;protein_id=MCP9536010.1;transl_table=11 JANDXE010000001.1 Genbank gene 76597 77589 . + . ID=gene-NND05_00305;Name=NND05_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00305 JANDXE010000001.1 GeneMarkS-2+ CDS 76597 77589 . + 0 ID=cds-MCP9536011.1;Parent=gene-NND05_00305;Dbxref=NCBI_GP:MCP9536011.1;Name=MCP9536011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00305;product=hypothetical protein;protein_id=MCP9536011.1;transl_table=11 JANDXE010000001.1 Genbank gene 77749 79191 . - . ID=gene-NND05_00310;Name=NND05_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00310 JANDXE010000001.1 Protein Homology CDS 77749 79191 . - 0 ID=cds-MCP9536012.1;Parent=gene-NND05_00310;Dbxref=NCBI_GP:MCP9536012.1;Name=MCP9536012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015546476.1;locus_tag=NND05_00310;product=alanine:cation symporter family protein;protein_id=MCP9536012.1;transl_table=11 JANDXE010000001.1 Genbank gene 79427 80653 . - . ID=gene-NND05_00315;Name=NND05_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00315 JANDXE010000001.1 Protein Homology CDS 79427 80653 . - 0 ID=cds-MCP9536013.1;Parent=gene-NND05_00315;Dbxref=NCBI_GP:MCP9536013.1;Name=MCP9536013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=NND05_00315;product=GIY-YIG nuclease family protein;protein_id=MCP9536013.1;transl_table=11 JANDXE010000001.1 Genbank gene 80687 80947 . - . ID=gene-NND05_00320;Name=NND05_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00320 JANDXE010000001.1 GeneMarkS-2+ CDS 80687 80947 . - 0 ID=cds-MCP9536014.1;Parent=gene-NND05_00320;Dbxref=NCBI_GP:MCP9536014.1;Name=MCP9536014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00320;product=hypothetical protein;protein_id=MCP9536014.1;transl_table=11 JANDXE010000001.1 Genbank gene 80966 82999 . - . ID=gene-NND05_00325;Name=NND05_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00325 JANDXE010000001.1 Protein Homology CDS 80966 82999 . - 0 ID=cds-MCP9536015.1;Parent=gene-NND05_00325;Dbxref=NCBI_GP:MCP9536015.1;Name=MCP9536015.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846897.1;locus_tag=NND05_00325;product=DEAD/DEAH box helicase family protein;protein_id=MCP9536015.1;transl_table=11 JANDXE010000001.1 Genbank gene 83015 85771 . - . ID=gene-NND05_00330;Name=NND05_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00330 JANDXE010000001.1 Protein Homology CDS 83015 85771 . - 0 ID=cds-MCP9536016.1;Parent=gene-NND05_00330;Dbxref=NCBI_GP:MCP9536016.1;Name=MCP9536016.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=NND05_00330;product=N-6 DNA methylase;protein_id=MCP9536016.1;transl_table=11 JANDXE010000001.1 Genbank gene 86709 87065 . - . ID=gene-NND05_00335;Name=NND05_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00335 JANDXE010000001.1 Protein Homology CDS 86709 87065 . - 0 ID=cds-MCP9536017.1;Parent=gene-NND05_00335;Dbxref=NCBI_GP:MCP9536017.1;Name=MCP9536017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846902.1;locus_tag=NND05_00335;product=nucleotidyltransferase domain-containing protein;protein_id=MCP9536017.1;transl_table=11 JANDXE010000001.1 Genbank gene 87073 87498 . - . ID=gene-NND05_00340;Name=NND05_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00340 JANDXE010000001.1 Protein Homology CDS 87073 87498 . - 0 ID=cds-MCP9536018.1;Parent=gene-NND05_00340;Dbxref=NCBI_GP:MCP9536018.1;Name=MCP9536018.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377353.1;locus_tag=NND05_00340;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=MCP9536018.1;transl_table=11 JANDXE010000001.1 Genbank gene 87499 87723 . - . ID=gene-NND05_00345;Name=NND05_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00345 JANDXE010000001.1 Protein Homology CDS 87499 87723 . - 0 ID=cds-MCP9536019.1;Parent=gene-NND05_00345;Dbxref=NCBI_GP:MCP9536019.1;Name=MCP9536019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860172.1;locus_tag=NND05_00345;product=hypothetical protein;protein_id=MCP9536019.1;transl_table=11 JANDXE010000001.1 Genbank gene 87801 88439 . - . ID=gene-NND05_00350;Name=NND05_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00350 JANDXE010000001.1 Protein Homology CDS 87801 88439 . - 0 ID=cds-MCP9536020.1;Parent=gene-NND05_00350;Dbxref=NCBI_GP:MCP9536020.1;Name=MCP9536020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_00350;product=hypothetical protein;protein_id=MCP9536020.1;transl_table=11 JANDXE010000001.1 Genbank gene 88944 90515 . + . ID=gene-NND05_00355;Name=NND05_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00355 JANDXE010000001.1 Protein Homology CDS 88944 90515 . + 0 ID=cds-MCP9536021.1;Parent=gene-NND05_00355;Dbxref=NCBI_GP:MCP9536021.1;Name=MCP9536021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849132.1;locus_tag=NND05_00355;product=ATP-binding protein;protein_id=MCP9536021.1;transl_table=11 JANDXE010000001.1 Genbank gene 90609 92003 . - . ID=gene-NND05_00360;Name=NND05_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00360 JANDXE010000001.1 Protein Homology CDS 90609 92003 . - 0 ID=cds-MCP9536022.1;Parent=gene-NND05_00360;Dbxref=NCBI_GP:MCP9536022.1;Name=MCP9536022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173731.1;locus_tag=NND05_00360;product=right-handed parallel beta-helix repeat-containing protein;protein_id=MCP9536022.1;transl_table=11 JANDXE010000001.1 Genbank gene 92063 94894 . - . ID=gene-NND05_00365;Name=NND05_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00365 JANDXE010000001.1 Protein Homology CDS 92063 94894 . - 0 ID=cds-MCP9536023.1;Parent=gene-NND05_00365;Dbxref=NCBI_GP:MCP9536023.1;Name=MCP9536023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847206.1;locus_tag=NND05_00365;product=TonB-dependent receptor;protein_id=MCP9536023.1;transl_table=11 JANDXE010000001.1 Genbank gene 94953 96023 . - . ID=gene-NND05_00370;Name=NND05_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00370 JANDXE010000001.1 Protein Homology CDS 94953 96023 . - 0 ID=cds-MCP9536024.1;Parent=gene-NND05_00370;Dbxref=NCBI_GP:MCP9536024.1;Name=MCP9536024.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337439.1;locus_tag=NND05_00370;product=metallophosphoesterase;protein_id=MCP9536024.1;transl_table=11 JANDXE010000001.1 Genbank gene 96320 96889 . + . ID=gene-NND05_00375;Name=NND05_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00375 JANDXE010000001.1 GeneMarkS-2+ CDS 96320 96889 . + 0 ID=cds-MCP9536025.1;Parent=gene-NND05_00375;Dbxref=NCBI_GP:MCP9536025.1;Name=MCP9536025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00375;product=hypothetical protein;protein_id=MCP9536025.1;transl_table=11 JANDXE010000001.1 Genbank gene 97022 98812 . - . ID=gene-NND05_00380;Name=NND05_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00380 JANDXE010000001.1 Protein Homology CDS 97022 98812 . - 0 ID=cds-MCP9536026.1;Parent=gene-NND05_00380;Dbxref=NCBI_GP:MCP9536026.1;Name=MCP9536026.1;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847203.1;locus_tag=NND05_00380;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=MCP9536026.1;transl_table=11 JANDXE010000001.1 Genbank gene 98928 99296 . - . ID=gene-NND05_00385;Name=NND05_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00385 JANDXE010000001.1 Protein Homology CDS 98928 99296 . - 0 ID=cds-MCP9536027.1;Parent=gene-NND05_00385;Dbxref=NCBI_GP:MCP9536027.1;Name=MCP9536027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013546334.1;locus_tag=NND05_00385;product=helix-turn-helix transcriptional regulator;protein_id=MCP9536027.1;transl_table=11 JANDXE010000001.1 Genbank gene 99656 100105 . + . ID=gene-NND05_00390;Name=NND05_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00390 JANDXE010000001.1 Protein Homology CDS 99656 100105 . + 0 ID=cds-MCP9536028.1;Parent=gene-NND05_00390;Dbxref=NCBI_GP:MCP9536028.1;Name=MCP9536028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008141894.1;locus_tag=NND05_00390;product=cupin domain-containing protein;protein_id=MCP9536028.1;transl_table=11 JANDXE010000001.1 Genbank gene 100386 101165 . + . ID=gene-NND05_00395;Name=NND05_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00395 JANDXE010000001.1 Protein Homology CDS 100386 101165 . + 0 ID=cds-MCP9536029.1;Parent=gene-NND05_00395;Dbxref=NCBI_GP:MCP9536029.1;Name=MCP9536029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004291637.1;locus_tag=NND05_00395;product=MBL fold metallo-hydrolase;protein_id=MCP9536029.1;transl_table=11 JANDXE010000001.1 Genbank gene 101206 101406 . + . ID=gene-NND05_00400;Name=NND05_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00400 JANDXE010000001.1 Protein Homology CDS 101206 101406 . + 0 ID=cds-MCP9536030.1;Parent=gene-NND05_00400;Dbxref=NCBI_GP:MCP9536030.1;Name=MCP9536030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019146.2;locus_tag=NND05_00400;product=hypothetical protein;protein_id=MCP9536030.1;transl_table=11 JANDXE010000001.1 Genbank gene 101532 102413 . + . ID=gene-NND05_00405;Name=NND05_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00405 JANDXE010000001.1 Protein Homology CDS 101532 102413 . + 0 ID=cds-MCP9536031.1;Parent=gene-NND05_00405;Dbxref=NCBI_GP:MCP9536031.1;Name=MCP9536031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014775428.1;locus_tag=NND05_00405;product=radical SAM mobile pair protein B;protein_id=MCP9536031.1;transl_table=11 JANDXE010000001.1 Genbank gene 102712 103083 . - . ID=gene-NND05_00410;Name=NND05_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00410 JANDXE010000001.1 Protein Homology CDS 102712 103083 . - 0 ID=cds-MCP9536032.1;Parent=gene-NND05_00410;Dbxref=NCBI_GP:MCP9536032.1;Name=MCP9536032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010992124.1;locus_tag=NND05_00410;product=MmcQ/YjbR family DNA-binding protein;protein_id=MCP9536032.1;transl_table=11 JANDXE010000001.1 Genbank gene 103209 103571 . - . ID=gene-NND05_00415;Name=NND05_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00415 JANDXE010000001.1 GeneMarkS-2+ CDS 103209 103571 . - 0 ID=cds-MCP9536033.1;Parent=gene-NND05_00415;Dbxref=NCBI_GP:MCP9536033.1;Name=MCP9536033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00415;product=hypothetical protein;protein_id=MCP9536033.1;transl_table=11 JANDXE010000001.1 Genbank gene 103688 104326 . - . ID=gene-NND05_00420;Name=NND05_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00420 JANDXE010000001.1 Protein Homology CDS 103688 104326 . - 0 ID=cds-MCP9536034.1;Parent=gene-NND05_00420;Dbxref=NCBI_GP:MCP9536034.1;Name=MCP9536034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005807135.1;locus_tag=NND05_00420;product=CatA-like O-acetyltransferase%2C family 2;protein_id=MCP9536034.1;transl_table=11 JANDXE010000001.1 Genbank gene 104653 104913 . + . ID=gene-NND05_00425;Name=NND05_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00425 JANDXE010000001.1 Protein Homology CDS 104653 104913 . + 0 ID=cds-MCP9536035.1;Parent=gene-NND05_00425;Dbxref=NCBI_GP:MCP9536035.1;Name=MCP9536035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847201.1;locus_tag=NND05_00425;product=DUF4492 domain-containing protein;protein_id=MCP9536035.1;transl_table=11 JANDXE010000001.1 Genbank gene 105009 106544 . + . ID=gene-NND05_00430;Name=NND05_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00430 JANDXE010000001.1 Protein Homology CDS 105009 106544 . + 0 ID=cds-MCP9536036.1;Parent=gene-NND05_00430;Dbxref=NCBI_GP:MCP9536036.1;Name=MCP9536036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847200.1;locus_tag=NND05_00430;product=cytochrome ubiquinol oxidase subunit I;protein_id=MCP9536036.1;transl_table=11 JANDXE010000001.1 Genbank gene 106632 107765 . + . ID=gene-NND05_00435;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NND05_00435 JANDXE010000001.1 Protein Homology CDS 106632 107765 . + 0 ID=cds-MCP9536037.1;Parent=gene-NND05_00435;Dbxref=NCBI_GP:MCP9536037.1;Name=MCP9536037.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847199.1;locus_tag=NND05_00435;product=cytochrome d ubiquinol oxidase subunit II;protein_id=MCP9536037.1;transl_table=11 JANDXE010000001.1 Genbank gene 107979 110348 . + . ID=gene-NND05_00440;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NND05_00440 JANDXE010000001.1 Protein Homology CDS 107979 110348 . + 0 ID=cds-MCP9536038.1;Parent=gene-NND05_00440;Dbxref=NCBI_GP:MCP9536038.1;Name=MCP9536038.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574128.1;locus_tag=NND05_00440;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=MCP9536038.1;transl_table=11 JANDXE010000001.1 Genbank gene 110523 111695 . + . ID=gene-NND05_00445;Name=NND05_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00445 JANDXE010000001.1 Protein Homology CDS 110523 111695 . + 0 ID=cds-MCP9536039.1;Parent=gene-NND05_00445;Dbxref=NCBI_GP:MCP9536039.1;Name=MCP9536039.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012640.2;locus_tag=NND05_00445;product=aminodeoxychorismate synthase component I;protein_id=MCP9536039.1;transl_table=11 JANDXE010000001.1 Genbank gene 111727 112326 . + . ID=gene-NND05_00450;Name=NND05_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00450 JANDXE010000001.1 Protein Homology CDS 111727 112326 . + 0 ID=cds-MCP9536040.1;Parent=gene-NND05_00450;Dbxref=NCBI_GP:MCP9536040.1;Name=MCP9536040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124695.1;locus_tag=NND05_00450;product=aminotransferase class IV family protein;protein_id=MCP9536040.1;transl_table=11 JANDXE010000001.1 Genbank gene 112321 113241 . - . ID=gene-NND05_00455;Name=NND05_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00455 JANDXE010000001.1 Protein Homology CDS 112321 113241 . - 0 ID=cds-MCP9536041.1;Parent=gene-NND05_00455;Dbxref=NCBI_GP:MCP9536041.1;Name=MCP9536041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847193.1;locus_tag=NND05_00455;product=MBL fold metallo-hydrolase;protein_id=MCP9536041.1;transl_table=11 JANDXE010000001.1 Genbank gene 113466 115232 . + . ID=gene-NND05_00460;Name=NND05_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00460 JANDXE010000001.1 Protein Homology CDS 113466 115232 . + 0 ID=cds-MCP9536042.1;Parent=gene-NND05_00460;Dbxref=NCBI_GP:MCP9536042.1;Name=MCP9536042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846617.1;locus_tag=NND05_00460;product=ATP-binding protein;protein_id=MCP9536042.1;transl_table=11 JANDXE010000001.1 Genbank gene 115312 118200 . - . ID=gene-NND05_00465;Name=NND05_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00465 JANDXE010000001.1 Protein Homology CDS 115312 118200 . - 0 ID=cds-MCP9536043.1;Parent=gene-NND05_00465;Dbxref=NCBI_GP:MCP9536043.1;Name=MCP9536043.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=NND05_00465;product=DEAD/DEAH box helicase family protein;protein_id=MCP9536043.1;transl_table=11 JANDXE010000001.1 Genbank gene 118207 120228 . - . ID=gene-NND05_00470;Name=NND05_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00470 JANDXE010000001.1 Protein Homology CDS 118207 120228 . - 0 ID=cds-MCP9536044.1;Parent=gene-NND05_00470;Dbxref=NCBI_GP:MCP9536044.1;Name=MCP9536044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NND05_00470;product=site-specific DNA-methyltransferase;protein_id=MCP9536044.1;transl_table=11 JANDXE010000001.1 Genbank gene 120769 121761 . + . ID=gene-NND05_00475;Name=NND05_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00475 JANDXE010000001.1 GeneMarkS-2+ CDS 120769 121761 . + 0 ID=cds-MCP9536045.1;Parent=gene-NND05_00475;Dbxref=NCBI_GP:MCP9536045.1;Name=MCP9536045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00475;product=hypothetical protein;protein_id=MCP9536045.1;transl_table=11 JANDXE010000001.1 Genbank gene 121697 122527 . + . ID=gene-NND05_00480;Name=NND05_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00480 JANDXE010000001.1 GeneMarkS-2+ CDS 121697 122527 . + 0 ID=cds-MCP9536046.1;Parent=gene-NND05_00480;Dbxref=NCBI_GP:MCP9536046.1;Name=MCP9536046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00480;product=hypothetical protein;protein_id=MCP9536046.1;transl_table=11 JANDXE010000001.1 Genbank gene 122961 123371 . + . ID=gene-NND05_00485;Name=NND05_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00485 JANDXE010000001.1 Protein Homology CDS 122961 123371 . + 0 ID=cds-MCP9536047.1;Parent=gene-NND05_00485;Dbxref=NCBI_GP:MCP9536047.1;Name=MCP9536047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846610.1;locus_tag=NND05_00485;product=hypothetical protein;protein_id=MCP9536047.1;transl_table=11 JANDXE010000001.1 Genbank gene 123583 124917 . + . ID=gene-NND05_00490;Name=NND05_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00490 JANDXE010000001.1 Protein Homology CDS 123583 124917 . + 0 ID=cds-MCP9536048.1;Parent=gene-NND05_00490;Dbxref=NCBI_GP:MCP9536048.1;Name=MCP9536048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847183.1;locus_tag=NND05_00490;product=hypothetical protein;protein_id=MCP9536048.1;transl_table=11 JANDXE010000001.1 Genbank gene 124932 125936 . + . ID=gene-NND05_00495;Name=NND05_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00495 JANDXE010000001.1 Protein Homology CDS 124932 125936 . + 0 ID=cds-MCP9536049.1;Parent=gene-NND05_00495;Dbxref=NCBI_GP:MCP9536049.1;Name=MCP9536049.1;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF013930.2;locus_tag=NND05_00495;product=CHC2 zinc finger domain-containing protein;protein_id=MCP9536049.1;transl_table=11 JANDXE010000001.1 Genbank gene 125979 126203 . + . ID=gene-NND05_00500;Name=NND05_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00500 JANDXE010000001.1 Protein Homology CDS 125979 126203 . + 0 ID=cds-MCP9536050.1;Parent=gene-NND05_00500;Dbxref=NCBI_GP:MCP9536050.1;Name=MCP9536050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846606.1;locus_tag=NND05_00500;product=DUF4248 domain-containing protein;protein_id=MCP9536050.1;transl_table=11 JANDXE010000001.1 Genbank gene 126427 126621 . + . ID=gene-NND05_00505;Name=NND05_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00505 JANDXE010000001.1 GeneMarkS-2+ CDS 126427 126621 . + 0 ID=cds-MCP9536051.1;Parent=gene-NND05_00505;Dbxref=NCBI_GP:MCP9536051.1;Name=MCP9536051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00505;product=hypothetical protein;protein_id=MCP9536051.1;transl_table=11 JANDXE010000001.1 Genbank gene 126696 127328 . + . ID=gene-NND05_00510;Name=NND05_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00510 JANDXE010000001.1 Protein Homology CDS 126696 127328 . + 0 ID=cds-MCP9536052.1;Parent=gene-NND05_00510;Dbxref=NCBI_GP:MCP9536052.1;Name=MCP9536052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847179.1;locus_tag=NND05_00510;product=DNA-binding protein;protein_id=MCP9536052.1;transl_table=11 JANDXE010000001.1 Genbank gene 127453 129351 . - . ID=gene-NND05_00515;Name=NND05_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00515 JANDXE010000001.1 Protein Homology CDS 127453 129351 . - 0 ID=cds-MCP9536053.1;Parent=gene-NND05_00515;Dbxref=NCBI_GP:MCP9536053.1;Name=MCP9536053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847177.1;locus_tag=NND05_00515;product=SLC13 family permease;protein_id=MCP9536053.1;transl_table=11 JANDXE010000001.1 Genbank gene 129549 130877 . + . ID=gene-NND05_00520;Name=NND05_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00520 JANDXE010000001.1 Protein Homology CDS 129549 130877 . + 0 ID=cds-MCP9536054.1;Parent=gene-NND05_00520;Dbxref=NCBI_GP:MCP9536054.1;Name=MCP9536054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013616839.1;locus_tag=NND05_00520;product=inositol-3-phosphate synthase;protein_id=MCP9536054.1;transl_table=11 JANDXE010000001.1 Genbank gene 131204 131689 . + . ID=gene-NND05_00525;Name=NND05_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00525 JANDXE010000001.1 Protein Homology CDS 131204 131689 . + 0 ID=cds-MCP9536055.1;Parent=gene-NND05_00525;Dbxref=NCBI_GP:MCP9536055.1;Name=MCP9536055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172794.1;locus_tag=NND05_00525;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=MCP9536055.1;transl_table=11 JANDXE010000001.1 Genbank gene 131793 132920 . - . ID=gene-NND05_00530;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NND05_00530 JANDXE010000001.1 Protein Homology CDS 131793 132920 . - 0 ID=cds-MCP9536056.1;Parent=gene-NND05_00530;Dbxref=NCBI_GP:MCP9536056.1;Name=MCP9536056.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671087.1;locus_tag=NND05_00530;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MCP9536056.1;transl_table=11 JANDXE010000001.1 Genbank gene 133220 134908 . + . ID=gene-NND05_00535;Name=NND05_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00535 JANDXE010000001.1 Protein Homology CDS 133220 134908 . + 0 ID=cds-MCP9536057.1;Parent=gene-NND05_00535;Dbxref=NCBI_GP:MCP9536057.1;Name=MCP9536057.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007835703.1;locus_tag=NND05_00535;product=putative transporter;protein_id=MCP9536057.1;transl_table=11 JANDXE010000001.1 Genbank gene 134913 136367 . + . ID=gene-NND05_00540;Name=NND05_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00540 JANDXE010000001.1 Protein Homology CDS 134913 136367 . + 0 ID=cds-MCP9536058.1;Parent=gene-NND05_00540;Dbxref=NCBI_GP:MCP9536058.1;Name=MCP9536058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847173.1;locus_tag=NND05_00540;product=threonine/serine exporter family protein;protein_id=MCP9536058.1;transl_table=11 JANDXE010000001.1 Genbank gene 136514 137425 . + . ID=gene-NND05_00545;Name=NND05_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00545 JANDXE010000001.1 Protein Homology CDS 136514 137425 . + 0 ID=cds-MCP9536059.1;Parent=gene-NND05_00545;Dbxref=NCBI_GP:MCP9536059.1;Name=MCP9536059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847172.1;locus_tag=NND05_00545;product=LysR substrate-binding domain-containing protein;protein_id=MCP9536059.1;transl_table=11 JANDXE010000001.1 Genbank gene 137719 138597 . - . ID=gene-NND05_00550;Name=NND05_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00550 JANDXE010000001.1 Protein Homology CDS 137719 138597 . - 0 ID=cds-MCP9536060.1;Parent=gene-NND05_00550;Dbxref=NCBI_GP:MCP9536060.1;Name=MCP9536060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847171.1;locus_tag=NND05_00550;product=DMT family transporter;protein_id=MCP9536060.1;transl_table=11 JANDXE010000001.1 Genbank gene 138895 139764 . + . ID=gene-NND05_00555;Name=NND05_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00555 JANDXE010000001.1 Protein Homology CDS 138895 139764 . + 0 ID=cds-MCP9536061.1;Parent=gene-NND05_00555;Dbxref=NCBI_GP:MCP9536061.1;Name=MCP9536061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340237.1;locus_tag=NND05_00555;product=aldose 1-epimerase family protein;protein_id=MCP9536061.1;transl_table=11 JANDXE010000001.1 Genbank gene 139764 141767 . + . ID=gene-NND05_00560;Name=NND05_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00560 JANDXE010000001.1 Protein Homology CDS 139764 141767 . + 0 ID=cds-MCP9536062.1;Parent=gene-NND05_00560;Dbxref=NCBI_GP:MCP9536062.1;Name=MCP9536062.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174260.1;locus_tag=NND05_00560;product=oligopeptide transporter%2C OPT family;protein_id=MCP9536062.1;transl_table=11 JANDXE010000001.1 Genbank gene 141831 145823 . - . ID=gene-NND05_00565;Name=NND05_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00565 JANDXE010000001.1 Protein Homology CDS 141831 145823 . - 0 ID=cds-MCP9536063.1;Parent=gene-NND05_00565;Dbxref=NCBI_GP:MCP9536063.1;Name=MCP9536063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344996.1;locus_tag=NND05_00565;product=ATP-binding protein;protein_id=MCP9536063.1;transl_table=11 JANDXE010000001.1 Genbank gene 145922 148021 . - . ID=gene-NND05_00570;Name=NND05_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00570 JANDXE010000001.1 Protein Homology CDS 145922 148021 . - 0 ID=cds-MCP9536064.1;Parent=gene-NND05_00570;Dbxref=NCBI_GP:MCP9536064.1;Name=MCP9536064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007217228.1;locus_tag=NND05_00570;product=S9 family peptidase;protein_id=MCP9536064.1;transl_table=11 JANDXE010000001.1 Genbank gene 148130 149458 . - . ID=gene-NND05_00575;Name=NND05_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00575 JANDXE010000001.1 Protein Homology CDS 148130 149458 . - 0 ID=cds-MCP9536065.1;Parent=gene-NND05_00575;Dbxref=NCBI_GP:MCP9536065.1;Name=MCP9536065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005833095.1;locus_tag=NND05_00575;product=IgA Peptidase M64;protein_id=MCP9536065.1;transl_table=11 JANDXE010000001.1 Genbank gene 149513 151285 . - . ID=gene-NND05_00580;Name=NND05_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00580 JANDXE010000001.1 Protein Homology CDS 149513 151285 . - 0 ID=cds-MCP9536066.1;Parent=gene-NND05_00580;Dbxref=NCBI_GP:MCP9536066.1;Name=MCP9536066.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:TIGR01250.1;locus_tag=NND05_00580;product=proline iminopeptidase-family hydrolase;protein_id=MCP9536066.1;transl_table=11 JANDXE010000001.1 Genbank gene 151512 152372 . + . ID=gene-NND05_00585;Name=NND05_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00585 JANDXE010000001.1 Protein Homology CDS 151512 152372 . + 0 ID=cds-MCP9536067.1;Parent=gene-NND05_00585;Dbxref=NCBI_GP:MCP9536067.1;Name=MCP9536067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016278483.1;locus_tag=NND05_00585;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9536067.1;transl_table=11 JANDXE010000001.1 Genbank gene 152469 154577 . - . ID=gene-NND05_00590;Name=NND05_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00590 JANDXE010000001.1 GeneMarkS-2+ CDS 152469 154577 . - 0 ID=cds-MCP9536068.1;Parent=gene-NND05_00590;Dbxref=NCBI_GP:MCP9536068.1;Name=MCP9536068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00590;product=outer membrane beta-barrel family protein;protein_id=MCP9536068.1;transl_table=11 JANDXE010000001.1 Genbank gene 154570 155271 . - . ID=gene-NND05_00595;Name=NND05_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00595 JANDXE010000001.1 GeneMarkS-2+ CDS 154570 155271 . - 0 ID=cds-MCP9536069.1;Parent=gene-NND05_00595;Dbxref=NCBI_GP:MCP9536069.1;Name=MCP9536069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00595;product=hypothetical protein;protein_id=MCP9536069.1;transl_table=11 JANDXE010000001.1 Genbank gene 155294 156646 . - . ID=gene-NND05_00600;Name=NND05_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00600 JANDXE010000001.1 Protein Homology CDS 155294 156646 . - 0 ID=cds-MCP9536070.1;Parent=gene-NND05_00600;Dbxref=NCBI_GP:MCP9536070.1;Name=MCP9536070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846057.1;locus_tag=NND05_00600;product=DUF6055 domain-containing protein;protein_id=MCP9536070.1;transl_table=11 JANDXE010000001.1 Genbank gene 157433 159499 . - . ID=gene-NND05_00605;Name=NND05_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00605 JANDXE010000001.1 Protein Homology CDS 157433 159499 . - 0 ID=cds-MCP9536071.1;Parent=gene-NND05_00605;Dbxref=NCBI_GP:MCP9536071.1;Name=MCP9536071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007560091.1;locus_tag=NND05_00605;product=DUF4859 domain-containing protein;protein_id=MCP9536071.1;transl_table=11 JANDXE010000001.1 Genbank gene 159620 161671 . - . ID=gene-NND05_00610;Name=NND05_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00610 JANDXE010000001.1 Protein Homology CDS 159620 161671 . - 0 ID=cds-MCP9536072.1;Parent=gene-NND05_00610;Dbxref=NCBI_GP:MCP9536072.1;Name=MCP9536072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844983.1;locus_tag=NND05_00610;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536072.1;transl_table=11 JANDXE010000001.1 Genbank gene 161685 164969 . - . ID=gene-NND05_00615;Name=NND05_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00615 JANDXE010000001.1 Protein Homology CDS 161685 164969 . - 0 ID=cds-MCP9536073.1;Parent=gene-NND05_00615;Dbxref=NCBI_GP:MCP9536073.1;Name=MCP9536073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645074.1;locus_tag=NND05_00615;product=TonB-dependent receptor;protein_id=MCP9536073.1;transl_table=11 JANDXE010000001.1 Genbank gene 165197 168097 . - . ID=gene-NND05_00620;Name=NND05_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00620 JANDXE010000001.1 Protein Homology CDS 165197 168097 . - 0 ID=cds-MCP9536074.1;Parent=gene-NND05_00620;Dbxref=NCBI_GP:MCP9536074.1;Name=MCP9536074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573432.1;locus_tag=NND05_00620;product=glycoside hydrolase family 127 protein;protein_id=MCP9536074.1;transl_table=11 JANDXE010000001.1 Genbank gene 168376 170361 . + . ID=gene-NND05_00625;Name=NND05_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00625 JANDXE010000001.1 Protein Homology CDS 168376 170361 . + 0 ID=cds-MCP9536075.1;Parent=gene-NND05_00625;Dbxref=NCBI_GP:MCP9536075.1;Name=MCP9536075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065451.1;locus_tag=NND05_00625;product=glycoside hydrolase family 97 protein;protein_id=MCP9536075.1;transl_table=11 JANDXE010000001.1 Genbank gene 170444 172843 . + . ID=gene-NND05_00630;Name=NND05_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00630 JANDXE010000001.1 Protein Homology CDS 170444 172843 . + 0 ID=cds-MCP9536076.1;Parent=gene-NND05_00630;Dbxref=NCBI_GP:MCP9536076.1;Name=MCP9536076.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009129349.1;locus_tag=NND05_00630;product=family 43 glycosylhydrolase;protein_id=MCP9536076.1;transl_table=11 JANDXE010000001.1 Genbank gene 172850 175324 . + . ID=gene-NND05_00635;Name=NND05_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00635 JANDXE010000001.1 Protein Homology CDS 172850 175324 . + 0 ID=cds-MCP9536077.1;Parent=gene-NND05_00635;Dbxref=NCBI_GP:MCP9536077.1;Name=MCP9536077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016271767.1;locus_tag=NND05_00635;product=glycoside hydrolase family 127 protein;protein_id=MCP9536077.1;transl_table=11 JANDXE010000001.1 Genbank gene 175309 175554 . + . ID=gene-NND05_00640;Name=NND05_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00640 JANDXE010000001.1 GeneMarkS-2+ CDS 175309 175554 . + 0 ID=cds-MCP9536078.1;Parent=gene-NND05_00640;Dbxref=NCBI_GP:MCP9536078.1;Name=MCP9536078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00640;product=hypothetical protein;protein_id=MCP9536078.1;transl_table=11 JANDXE010000001.1 Genbank gene 175590 175997 . - . ID=gene-NND05_00645;Name=NND05_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00645 JANDXE010000001.1 GeneMarkS-2+ CDS 175590 175997 . - 0 ID=cds-MCP9536079.1;Parent=gene-NND05_00645;Dbxref=NCBI_GP:MCP9536079.1;Name=MCP9536079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00645;product=hypothetical protein;protein_id=MCP9536079.1;transl_table=11 JANDXE010000001.1 Genbank gene 175984 176286 . - . ID=gene-NND05_00650;Name=NND05_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00650 JANDXE010000001.1 GeneMarkS-2+ CDS 175984 176286 . - 0 ID=cds-MCP9536080.1;Parent=gene-NND05_00650;Dbxref=NCBI_GP:MCP9536080.1;Name=MCP9536080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00650;product=hypothetical protein;protein_id=MCP9536080.1;transl_table=11 JANDXE010000001.1 Genbank gene 176504 176923 . - . ID=gene-NND05_00655;Name=NND05_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00655 JANDXE010000001.1 GeneMarkS-2+ CDS 176504 176923 . - 0 ID=cds-MCP9536081.1;Parent=gene-NND05_00655;Dbxref=NCBI_GP:MCP9536081.1;Name=MCP9536081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00655;product=hypothetical protein;protein_id=MCP9536081.1;transl_table=11 JANDXE010000001.1 Genbank gene 177287 177802 . + . ID=gene-NND05_00660;Name=NND05_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00660 JANDXE010000001.1 Protein Homology CDS 177287 177802 . + 0 ID=cds-MCP9536082.1;Parent=gene-NND05_00660;Dbxref=NCBI_GP:MCP9536082.1;Name=MCP9536082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020123.2;locus_tag=NND05_00660;product=TlpA family protein disulfide reductase;protein_id=MCP9536082.1;transl_table=11 JANDXE010000001.1 Genbank gene 177866 178786 . - . ID=gene-NND05_00665;Name=NND05_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00665 JANDXE010000001.1 Protein Homology CDS 177866 178786 . - 0 ID=cds-MCP9536083.1;Parent=gene-NND05_00665;Dbxref=NCBI_GP:MCP9536083.1;Name=MCP9536083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_00665;product=helix-turn-helix domain-containing protein;protein_id=MCP9536083.1;transl_table=11 JANDXE010000001.1 Genbank gene 178824 179756 . - . ID=gene-NND05_00670;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=NND05_00670 JANDXE010000001.1 Protein Homology CDS 178824 179756 . - 0 ID=cds-MCP9536084.1;Parent=gene-NND05_00670;Dbxref=NCBI_GP:MCP9536084.1;Name=MCP9536084.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011524.1;locus_tag=NND05_00670;product=ribosome small subunit-dependent GTPase A;protein_id=MCP9536084.1;transl_table=11 JANDXE010000001.1 Genbank gene 179800 180360 . - . ID=gene-NND05_00675;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NND05_00675 JANDXE010000001.1 Protein Homology CDS 179800 180360 . - 0 ID=cds-MCP9536085.1;Parent=gene-NND05_00675;Dbxref=NCBI_GP:MCP9536085.1;Name=MCP9536085.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435748.1;locus_tag=NND05_00675;product=ribosome recycling factor;protein_id=MCP9536085.1;transl_table=11 JANDXE010000001.1 Genbank gene 180385 181194 . - . ID=gene-NND05_00680;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NND05_00680 JANDXE010000001.1 Protein Homology CDS 180385 181194 . - 0 ID=cds-MCP9536086.1;Parent=gene-NND05_00680;Dbxref=NCBI_GP:MCP9536086.1;Name=MCP9536086.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847158.1;locus_tag=NND05_00680;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=MCP9536086.1;transl_table=11 JANDXE010000001.1 Genbank gene 181389 182399 . + . ID=gene-NND05_00685;Name=NND05_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00685 JANDXE010000001.1 Protein Homology CDS 181389 182399 . + 0 ID=cds-MCP9536087.1;Parent=gene-NND05_00685;Dbxref=NCBI_GP:MCP9536087.1;Name=MCP9536087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847157.1;locus_tag=NND05_00685;product=flippase-like domain-containing protein;protein_id=MCP9536087.1;transl_table=11 JANDXE010000001.1 Genbank gene 182419 183882 . + . ID=gene-NND05_00690;Name=NND05_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00690 JANDXE010000001.1 Protein Homology CDS 182419 183882 . + 0 ID=cds-MCP9536088.1;Parent=gene-NND05_00690;Dbxref=NCBI_GP:MCP9536088.1;Name=MCP9536088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411139.1;locus_tag=NND05_00690;product=aminoacyl-histidine dipeptidase;protein_id=MCP9536088.1;transl_table=11 JANDXE010000001.1 Genbank gene 184194 185120 . + . ID=gene-NND05_00695;Name=NND05_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00695 JANDXE010000001.1 Protein Homology CDS 184194 185120 . + 0 ID=cds-MCP9536089.1;Parent=gene-NND05_00695;Dbxref=NCBI_GP:MCP9536089.1;Name=MCP9536089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952259.1;locus_tag=NND05_00695;product=magnesium transporter CorA family protein;protein_id=MCP9536089.1;transl_table=11 JANDXE010000001.1 Genbank gene 185322 187082 . + . ID=gene-NND05_00700;Name=NND05_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00700 JANDXE010000001.1 Protein Homology CDS 185322 187082 . + 0 ID=cds-MCP9536090.1;Parent=gene-NND05_00700;Dbxref=NCBI_GP:MCP9536090.1;Name=MCP9536090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377755.1;locus_tag=NND05_00700;product=DUF349 domain-containing protein;protein_id=MCP9536090.1;transl_table=11 JANDXE010000001.1 Genbank gene 187238 187308 . - . ID=gene-NND05_00705;Name=NND05_00705;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_00705 JANDXE010000001.1 tRNAscan-SE tRNA 187238 187308 . - . ID=rna-NND05_00705;Parent=gene-NND05_00705;anticodon=(pos:complement(187274..187276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00705;product=tRNA-Gln JANDXE010000001.1 tRNAscan-SE exon 187238 187308 . - . ID=exon-NND05_00705-1;Parent=rna-NND05_00705;anticodon=(pos:complement(187274..187276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00705;product=tRNA-Gln JANDXE010000001.1 Genbank gene 187344 187414 . - . ID=gene-NND05_00710;Name=NND05_00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_00710 JANDXE010000001.1 tRNAscan-SE tRNA 187344 187414 . - . ID=rna-NND05_00710;Parent=gene-NND05_00710;anticodon=(pos:complement(187380..187382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00710;product=tRNA-Gln JANDXE010000001.1 tRNAscan-SE exon 187344 187414 . - . ID=exon-NND05_00710-1;Parent=rna-NND05_00710;anticodon=(pos:complement(187380..187382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00710;product=tRNA-Gln JANDXE010000001.1 Genbank gene 187629 187988 . + . ID=gene-NND05_00715;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NND05_00715 JANDXE010000001.1 Protein Homology CDS 187629 187988 . + 0 ID=cds-MCP9536091.1;Parent=gene-NND05_00715;Dbxref=NCBI_GP:MCP9536091.1;Name=MCP9536091.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377733.1;locus_tag=NND05_00715;product=ribosome silencing factor;protein_id=MCP9536091.1;transl_table=11 JANDXE010000001.1 Genbank gene 188122 190209 . + . ID=gene-NND05_00720;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=NND05_00720 JANDXE010000001.1 Protein Homology CDS 188122 190209 . + 0 ID=cds-MCP9536092.1;Parent=gene-NND05_00720;Dbxref=NCBI_GP:MCP9536092.1;Name=MCP9536092.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281214.1;locus_tag=NND05_00720;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MCP9536092.1;transl_table=11 JANDXE010000001.1 Genbank gene 190221 191087 . + . ID=gene-NND05_00725;Name=NND05_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00725 JANDXE010000001.1 Protein Homology CDS 190221 191087 . + 0 ID=cds-MCP9536093.1;Parent=gene-NND05_00725;Dbxref=NCBI_GP:MCP9536093.1;Name=MCP9536093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847150.1;locus_tag=NND05_00725;product=phosphatidate cytidylyltransferase;protein_id=MCP9536093.1;transl_table=11 JANDXE010000001.1 Genbank pseudogene 191462 192604 . - . ID=gene-NND05_00730;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=pseudogene;locus_tag=NND05_00730;pseudo=true JANDXE010000001.1 Protein Homology CDS 191462 192604 . - 0 ID=cds-NND05_00730;Parent=gene-NND05_00730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011443.1;locus_tag=NND05_00730;product=lipid-A-disaccharide synthase;pseudo=true;transl_table=11 JANDXE010000001.1 Genbank gene 192601 193365 . - . ID=gene-NND05_00735;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NND05_00735 JANDXE010000001.1 Protein Homology CDS 192601 193365 . - 0 ID=cds-MCP9536094.1;Parent=gene-NND05_00735;Dbxref=NCBI_GP:MCP9536094.1;Name=MCP9536094.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135715.1;locus_tag=NND05_00735;product=5'/3'-nucleotidase SurE;protein_id=MCP9536094.1;transl_table=11 JANDXE010000001.1 Genbank gene 193520 194284 . + . ID=gene-NND05_00740;Name=NND05_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00740 JANDXE010000001.1 Protein Homology CDS 193520 194284 . + 0 ID=cds-MCP9536095.1;Parent=gene-NND05_00740;Dbxref=NCBI_GP:MCP9536095.1;Name=MCP9536095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008449946.1;locus_tag=NND05_00740;product=AAA family ATPase;protein_id=MCP9536095.1;transl_table=11 JANDXE010000001.1 Genbank gene 194346 195257 . + . ID=gene-NND05_00745;Name=NND05_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00745 JANDXE010000001.1 Protein Homology CDS 194346 195257 . + 0 ID=cds-MCP9536096.1;Parent=gene-NND05_00745;Dbxref=NCBI_GP:MCP9536096.1;Name=MCP9536096.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009229300.1;locus_tag=NND05_00745;product=ParB/RepB/Spo0J family partition protein;protein_id=MCP9536096.1;transl_table=11 JANDXE010000001.1 Genbank gene 195345 196103 . + . ID=gene-NND05_00750;Name=NND05_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00750 JANDXE010000001.1 Protein Homology CDS 195345 196103 . + 0 ID=cds-MCP9536097.1;Parent=gene-NND05_00750;Dbxref=NCBI_GP:MCP9536097.1;Name=MCP9536097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371852.1;locus_tag=NND05_00750;product=DUF5683 domain-containing protein;protein_id=MCP9536097.1;transl_table=11 JANDXE010000001.1 Genbank gene 196173 197549 . + . ID=gene-NND05_00755;Name=NND05_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00755 JANDXE010000001.1 Protein Homology CDS 196173 197549 . + 0 ID=cds-MCP9536098.1;Parent=gene-NND05_00755;Dbxref=NCBI_GP:MCP9536098.1;Name=MCP9536098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377679.1;locus_tag=NND05_00755;product=transglycosylase SLT domain-containing protein;protein_id=MCP9536098.1;transl_table=11 JANDXE010000001.1 Genbank gene 197633 199915 . + . ID=gene-NND05_00760;Name=NND05_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00760 JANDXE010000001.1 Protein Homology CDS 197633 199915 . + 0 ID=cds-MCP9536099.1;Parent=gene-NND05_00760;Dbxref=NCBI_GP:MCP9536099.1;Name=MCP9536099.1;Ontology_term=GO:0015968,GO:0015969,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=stringent response|0015968||IEA,guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919336.1;locus_tag=NND05_00760;product=RelA/SpoT family protein;protein_id=MCP9536099.1;transl_table=11 JANDXE010000001.1 Genbank pseudogene 200067 200201 . + . ID=gene-NND05_00765;Name=NND05_00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_00765;pseudo=true JANDXE010000001.1 Protein Homology CDS 200067 200201 . + 0 ID=cds-NND05_00765;Parent=gene-NND05_00765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847141.1;locus_tag=NND05_00765;product=pectin esterase;pseudo=true;transl_table=11 JANDXE010000001.1 Genbank gene 200258 200605 . - . ID=gene-NND05_00770;Name=NND05_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00770 JANDXE010000001.1 Protein Homology CDS 200258 200605 . - 0 ID=cds-MCP9536100.1;Parent=gene-NND05_00770;Dbxref=NCBI_GP:MCP9536100.1;Name=MCP9536100.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340147.1;locus_tag=NND05_00770;product=MerR family transcriptional regulator;protein_id=MCP9536100.1;transl_table=11 JANDXE010000001.1 Genbank gene 200786 203449 . + . ID=gene-NND05_00775;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NND05_00775 JANDXE010000001.1 Protein Homology CDS 200786 203449 . + 0 ID=cds-MCP9536101.1;Parent=gene-NND05_00775;Dbxref=NCBI_GP:MCP9536101.1;Name=MCP9536101.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463203.1;locus_tag=NND05_00775;product=alanine--tRNA ligase;protein_id=MCP9536101.1;transl_table=11 JANDXE010000001.1 Genbank gene 203628 204137 . + . ID=gene-NND05_00780;Name=NND05_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00780 JANDXE010000001.1 Protein Homology CDS 203628 204137 . + 0 ID=cds-MCP9536102.1;Parent=gene-NND05_00780;Dbxref=NCBI_GP:MCP9536102.1;Name=MCP9536102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367709.1;locus_tag=NND05_00780;product=gamma carbonic anhydrase family protein;protein_id=MCP9536102.1;transl_table=11 JANDXE010000001.1 Genbank gene 204358 204687 . - . ID=gene-NND05_00785;Name=NND05_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00785 JANDXE010000001.1 Protein Homology CDS 204358 204687 . - 0 ID=cds-MCP9536103.1;Parent=gene-NND05_00785;Dbxref=NCBI_GP:MCP9536103.1;Name=MCP9536103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464033.1;locus_tag=NND05_00785;product=heavy-metal-associated domain-containing protein;protein_id=MCP9536103.1;transl_table=11 JANDXE010000001.1 Genbank gene 204732 206855 . - . ID=gene-NND05_00790;Name=NND05_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00790 JANDXE010000001.1 Protein Homology CDS 204732 206855 . - 0 ID=cds-MCP9536104.1;Parent=gene-NND05_00790;Dbxref=NCBI_GP:MCP9536104.1;Name=MCP9536104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009135474.1;locus_tag=NND05_00790;product=TonB-dependent receptor;protein_id=MCP9536104.1;transl_table=11 JANDXE010000001.1 Genbank gene 207021 207434 . - . ID=gene-NND05_00795;Name=NND05_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00795 JANDXE010000001.1 GeneMarkS-2+ CDS 207021 207434 . - 0 ID=cds-MCP9536105.1;Parent=gene-NND05_00795;Dbxref=NCBI_GP:MCP9536105.1;Name=MCP9536105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00795;product=hypothetical protein;protein_id=MCP9536105.1;transl_table=11 JANDXE010000001.1 Genbank gene 207687 208925 . - . ID=gene-NND05_00800;Name=NND05_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00800 JANDXE010000001.1 Protein Homology CDS 207687 208925 . - 0 ID=cds-MCP9536106.1;Parent=gene-NND05_00800;Dbxref=NCBI_GP:MCP9536106.1;Name=MCP9536106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025749.2;locus_tag=NND05_00800;product=DUF4421 domain-containing protein;protein_id=MCP9536106.1;transl_table=11 JANDXE010000001.1 Genbank gene 209108 210835 . - . ID=gene-NND05_00805;Name=NND05_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00805 JANDXE010000001.1 Protein Homology CDS 209108 210835 . - 0 ID=cds-MCP9536107.1;Parent=gene-NND05_00805;Dbxref=NCBI_GP:MCP9536107.1;Name=MCP9536107.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848443.1;locus_tag=NND05_00805;product=alpha-amylase family glycosyl hydrolase;protein_id=MCP9536107.1;transl_table=11 JANDXE010000001.1 Genbank gene 210902 213004 . - . ID=gene-NND05_00810;Name=NND05_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00810 JANDXE010000001.1 Protein Homology CDS 210902 213004 . - 0 ID=cds-MCP9536108.1;Parent=gene-NND05_00810;Dbxref=NCBI_GP:MCP9536108.1;Name=MCP9536108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848444.1;locus_tag=NND05_00810;product=glycoside hydrolase family 97 protein;protein_id=MCP9536108.1;transl_table=11 JANDXE010000001.1 Genbank gene 213099 214826 . - . ID=gene-NND05_00815;Name=NND05_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00815 JANDXE010000001.1 Protein Homology CDS 213099 214826 . - 0 ID=cds-MCP9536109.1;Parent=gene-NND05_00815;Dbxref=NCBI_GP:MCP9536109.1;Name=MCP9536109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848445.1;locus_tag=NND05_00815;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536109.1;transl_table=11 JANDXE010000001.1 Genbank gene 214916 217873 . - . ID=gene-NND05_00820;Name=NND05_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00820 JANDXE010000001.1 Protein Homology CDS 214916 217873 . - 0 ID=cds-MCP9536110.1;Parent=gene-NND05_00820;Dbxref=NCBI_GP:MCP9536110.1;Name=MCP9536110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967781.1;locus_tag=NND05_00820;product=TonB-dependent receptor;protein_id=MCP9536110.1;transl_table=11 JANDXE010000001.1 Genbank gene 218101 219735 . + . ID=gene-NND05_00825;Name=NND05_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00825 JANDXE010000001.1 Protein Homology CDS 218101 219735 . + 0 ID=cds-MCP9536111.1;Parent=gene-NND05_00825;Dbxref=NCBI_GP:MCP9536111.1;Name=MCP9536111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039744.1;locus_tag=NND05_00825;product=DUF6377 domain-containing protein;protein_id=MCP9536111.1;transl_table=11 JANDXE010000001.1 Genbank gene 220089 220262 . - . ID=gene-NND05_00830;Name=NND05_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00830 JANDXE010000001.1 GeneMarkS-2+ CDS 220089 220262 . - 0 ID=cds-MCP9536112.1;Parent=gene-NND05_00830;Dbxref=NCBI_GP:MCP9536112.1;Name=MCP9536112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00830;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536112.1;transl_table=11 JANDXE010000001.1 Genbank gene 220579 222807 . + . ID=gene-NND05_00835;Name=NND05_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00835 JANDXE010000001.1 Protein Homology CDS 220579 222807 . + 0 ID=cds-MCP9536113.1;Parent=gene-NND05_00835;Dbxref=NCBI_GP:MCP9536113.1;Name=MCP9536113.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341524.1;locus_tag=NND05_00835;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=MCP9536113.1;transl_table=11 JANDXE010000001.1 Genbank gene 222899 224542 . - . ID=gene-NND05_00840;Name=NND05_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00840 JANDXE010000001.1 Protein Homology CDS 222899 224542 . - 0 ID=cds-MCP9536114.1;Parent=gene-NND05_00840;Dbxref=NCBI_GP:MCP9536114.1;Name=MCP9536114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039744.1;locus_tag=NND05_00840;product=DUF6377 domain-containing protein;protein_id=MCP9536114.1;transl_table=11 JANDXE010000001.1 Genbank gene 224888 227230 . + . ID=gene-NND05_00845;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=NND05_00845 JANDXE010000001.1 Protein Homology CDS 224888 227230 . + 0 ID=cds-MCP9536115.1;Parent=gene-NND05_00845;Dbxref=NCBI_GP:MCP9536115.1;Name=MCP9536115.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848481.1;locus_tag=NND05_00845;product=beta-glucosidase BglX;protein_id=MCP9536115.1;transl_table=11 JANDXE010000001.1 Genbank gene 227398 229536 . + . ID=gene-NND05_00850;Name=NND05_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00850 JANDXE010000001.1 Protein Homology CDS 227398 229536 . + 0 ID=cds-MCP9536116.1;Parent=gene-NND05_00850;Dbxref=NCBI_GP:MCP9536116.1;Name=MCP9536116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847097.1;locus_tag=NND05_00850;product=M3 family metallopeptidase;protein_id=MCP9536116.1;transl_table=11 JANDXE010000001.1 Genbank gene 229617 230117 . - . ID=gene-NND05_00855;Name=NND05_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00855 JANDXE010000001.1 Protein Homology CDS 229617 230117 . - 0 ID=cds-MCP9536117.1;Parent=gene-NND05_00855;Dbxref=NCBI_GP:MCP9536117.1;Name=MCP9536117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573681.1;locus_tag=NND05_00855;product=thioredoxin family protein;protein_id=MCP9536117.1;transl_table=11 JANDXE010000001.1 Genbank gene 230183 230848 . - . ID=gene-NND05_00860;Name=NND05_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00860 JANDXE010000001.1 Protein Homology CDS 230183 230848 . - 0 ID=cds-MCP9536118.1;Parent=gene-NND05_00860;Dbxref=NCBI_GP:MCP9536118.1;Name=MCP9536118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847093.1;locus_tag=NND05_00860;product=SprT-like domain-containing protein;protein_id=MCP9536118.1;transl_table=11 JANDXE010000001.1 Genbank gene 231151 231693 . + . ID=gene-NND05_00865;Name=NND05_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00865 JANDXE010000001.1 GeneMarkS-2+ CDS 231151 231693 . + 0 ID=cds-MCP9536119.1;Parent=gene-NND05_00865;Dbxref=NCBI_GP:MCP9536119.1;Name=MCP9536119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00865;product=hypothetical protein;protein_id=MCP9536119.1;transl_table=11 JANDXE010000001.1 Genbank gene 231827 233227 . + . ID=gene-NND05_00870;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=NND05_00870 JANDXE010000001.1 Protein Homology CDS 231827 233227 . + 0 ID=cds-MCP9536120.1;Parent=gene-NND05_00870;Dbxref=NCBI_GP:MCP9536120.1;Name=MCP9536120.1;Ontology_term=GO:0015846,GO:0005524,GO:0015417,GO:0009898,GO:0055052;gbkey=CDS;gene=potA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316768.1;locus_tag=NND05_00870;product=polyamine ABC transporter ATP-binding protein;protein_id=MCP9536120.1;transl_table=11 JANDXE010000001.1 Genbank gene 233251 234036 . + . ID=gene-NND05_00875;Name=NND05_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00875 JANDXE010000001.1 Protein Homology CDS 233251 234036 . + 0 ID=cds-MCP9536121.1;Parent=gene-NND05_00875;Dbxref=NCBI_GP:MCP9536121.1;Name=MCP9536121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005939017.1;locus_tag=NND05_00875;product=ABC transporter permease;protein_id=MCP9536121.1;transl_table=11 JANDXE010000001.1 Genbank gene 234060 234854 . + . ID=gene-NND05_00880;Name=NND05_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00880 JANDXE010000001.1 Protein Homology CDS 234060 234854 . + 0 ID=cds-MCP9536122.1;Parent=gene-NND05_00880;Dbxref=NCBI_GP:MCP9536122.1;Name=MCP9536122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316764.1;locus_tag=NND05_00880;product=ABC transporter permease;protein_id=MCP9536122.1;transl_table=11 JANDXE010000001.1 Genbank gene 234926 236233 . + . ID=gene-NND05_00885;Name=NND05_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00885 JANDXE010000001.1 Protein Homology CDS 234926 236233 . + 0 ID=cds-MCP9536123.1;Parent=gene-NND05_00885;Dbxref=NCBI_GP:MCP9536123.1;Name=MCP9536123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016267246.1;locus_tag=NND05_00885;product=ABC transporter substrate-binding protein;protein_id=MCP9536123.1;transl_table=11 JANDXE010000001.1 Genbank gene 236568 236649 . + . ID=gene-NND05_00890;Name=NND05_00890;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_00890 JANDXE010000001.1 tRNAscan-SE tRNA 236568 236649 . + . ID=rna-NND05_00890;Parent=gene-NND05_00890;anticodon=(pos:236602..236604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00890;product=tRNA-Tyr JANDXE010000001.1 tRNAscan-SE exon 236568 236649 . + . ID=exon-NND05_00890-1;Parent=rna-NND05_00890;anticodon=(pos:236602..236604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_00890;product=tRNA-Tyr JANDXE010000001.1 Genbank gene 236762 238321 . - . ID=gene-NND05_00895;Name=NND05_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00895 JANDXE010000001.1 GeneMarkS-2+ CDS 236762 238321 . - 0 ID=cds-MCP9536124.1;Parent=gene-NND05_00895;Dbxref=NCBI_GP:MCP9536124.1;Name=MCP9536124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00895;product=hypothetical protein;protein_id=MCP9536124.1;transl_table=11 JANDXE010000001.1 Genbank gene 238448 239656 . - . ID=gene-NND05_00900;Name=NND05_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00900 JANDXE010000001.1 Protein Homology CDS 238448 239656 . - 0 ID=cds-MCP9536125.1;Parent=gene-NND05_00900;Dbxref=NCBI_GP:MCP9536125.1;Name=MCP9536125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847208.1;locus_tag=NND05_00900;product=GDP-L-fucose synthase;protein_id=MCP9536125.1;transl_table=11 JANDXE010000001.1 Genbank gene 239704 240816 . - . ID=gene-NND05_00905;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NND05_00905 JANDXE010000001.1 Protein Homology CDS 239704 240816 . - 0 ID=cds-MCP9536126.1;Parent=gene-NND05_00905;Dbxref=NCBI_GP:MCP9536126.1;Name=MCP9536126.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283715.1;locus_tag=NND05_00905;product=GDP-mannose 4%2C6-dehydratase;protein_id=MCP9536126.1;transl_table=11 JANDXE010000001.1 Genbank gene 241001 242539 . - . ID=gene-NND05_00910;Name=NND05_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00910 JANDXE010000001.1 Protein Homology CDS 241001 242539 . - 0 ID=cds-MCP9536127.1;Parent=gene-NND05_00910;Dbxref=NCBI_GP:MCP9536127.1;Name=MCP9536127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367301.1;locus_tag=NND05_00910;product=AAA family ATPase;protein_id=MCP9536127.1;transl_table=11 JANDXE010000001.1 Genbank gene 242654 243136 . + . ID=gene-NND05_00915;Name=NND05_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00915 JANDXE010000001.1 Protein Homology CDS 242654 243136 . + 0 ID=cds-MCP9536128.1;Parent=gene-NND05_00915;Dbxref=NCBI_GP:MCP9536128.1;Name=MCP9536128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007575794.1;locus_tag=NND05_00915;product=hypothetical protein;protein_id=MCP9536128.1;transl_table=11 JANDXE010000001.1 Genbank gene 243120 243932 . + . ID=gene-NND05_00920;Name=NND05_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00920 JANDXE010000001.1 Protein Homology CDS 243120 243932 . + 0 ID=cds-MCP9536129.1;Parent=gene-NND05_00920;Dbxref=NCBI_GP:MCP9536129.1;Name=MCP9536129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340140.1;locus_tag=NND05_00920;product=DUF3822 family protein;protein_id=MCP9536129.1;transl_table=11 JANDXE010000001.1 Genbank gene 244027 244557 . + . ID=gene-NND05_00925;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NND05_00925 JANDXE010000001.1 Protein Homology CDS 244027 244557 . + 0 ID=cds-MCP9536130.1;Parent=gene-NND05_00925;Dbxref=NCBI_GP:MCP9536130.1;Name=MCP9536130.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135696.1;locus_tag=NND05_00925;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=MCP9536130.1;transl_table=11 JANDXE010000001.1 Genbank gene 244745 246169 . - . ID=gene-NND05_00930;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NND05_00930 JANDXE010000001.1 Protein Homology CDS 244745 246169 . - 0 ID=cds-MCP9536131.1;Parent=gene-NND05_00930;Dbxref=NCBI_GP:MCP9536131.1;Name=MCP9536131.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340137.1;locus_tag=NND05_00930;product=cardiolipin synthase;protein_id=MCP9536131.1;transl_table=11 JANDXE010000001.1 Genbank gene 246186 248147 . - . ID=gene-NND05_00935;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=NND05_00935 JANDXE010000001.1 Protein Homology CDS 246186 248147 . - 0 ID=cds-MCP9536132.1;Parent=gene-NND05_00935;Dbxref=NCBI_GP:MCP9536132.1;Name=MCP9536132.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847078.1;locus_tag=NND05_00935;product=DNA primase;protein_id=MCP9536132.1;transl_table=11 JANDXE010000001.1 Genbank gene 248352 250889 . + . ID=gene-NND05_00940;Name=NND05_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00940 JANDXE010000001.1 Protein Homology CDS 248352 250889 . + 0 ID=cds-MCP9536133.1;Parent=gene-NND05_00940;Dbxref=NCBI_GP:MCP9536133.1;Name=MCP9536133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847077.1;locus_tag=NND05_00940;product=glycosyl hydrolase 115 family protein;protein_id=MCP9536133.1;transl_table=11 JANDXE010000001.1 Genbank gene 250958 251761 . + . ID=gene-NND05_00945;Name=NND05_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00945 JANDXE010000001.1 GeneMarkS-2+ CDS 250958 251761 . + 0 ID=cds-MCP9536134.1;Parent=gene-NND05_00945;Dbxref=NCBI_GP:MCP9536134.1;Name=MCP9536134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00945;product=hypothetical protein;protein_id=MCP9536134.1;transl_table=11 JANDXE010000001.1 Genbank gene 251784 252464 . + . ID=gene-NND05_00950;Name=NND05_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00950 JANDXE010000001.1 GeneMarkS-2+ CDS 251784 252464 . + 0 ID=cds-MCP9536135.1;Parent=gene-NND05_00950;Dbxref=NCBI_GP:MCP9536135.1;Name=MCP9536135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00950;product=hypothetical protein;protein_id=MCP9536135.1;transl_table=11 JANDXE010000001.1 Genbank gene 253235 253834 . + . ID=gene-NND05_00955;Name=NND05_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00955 JANDXE010000001.1 Protein Homology CDS 253235 253834 . + 0 ID=cds-MCP9536136.1;Parent=gene-NND05_00955;Dbxref=NCBI_GP:MCP9536136.1;Name=MCP9536136.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_00955;product=HU family DNA-binding protein;protein_id=MCP9536136.1;transl_table=11 JANDXE010000001.1 Genbank gene 254098 256485 . + . ID=gene-NND05_00960;Name=NND05_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00960 JANDXE010000001.1 Protein Homology CDS 254098 256485 . + 0 ID=cds-MCP9536137.1;Parent=gene-NND05_00960;Dbxref=NCBI_GP:MCP9536137.1;Name=MCP9536137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009040363.1;locus_tag=NND05_00960;product=EVE domain-containing protein;protein_id=MCP9536137.1;transl_table=11 JANDXE010000001.1 Genbank gene 256482 257531 . + . ID=gene-NND05_00965;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=NND05_00965 JANDXE010000001.1 Protein Homology CDS 256482 257531 . + 0 ID=cds-MCP9536138.1;Parent=gene-NND05_00965;Dbxref=NCBI_GP:MCP9536138.1;Name=MCP9536138.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008651268.1;locus_tag=NND05_00965;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=MCP9536138.1;transl_table=11 JANDXE010000001.1 Genbank gene 258002 258610 . + . ID=gene-NND05_00970;Name=NND05_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00970 JANDXE010000001.1 GeneMarkS-2+ CDS 258002 258610 . + 0 ID=cds-MCP9536139.1;Parent=gene-NND05_00970;Dbxref=NCBI_GP:MCP9536139.1;Name=MCP9536139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_00970;product=hypothetical protein;protein_id=MCP9536139.1;transl_table=11 JANDXE010000001.1 Genbank gene 258806 259069 . + . ID=gene-NND05_00975;Name=NND05_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00975 JANDXE010000001.1 Protein Homology CDS 258806 259069 . + 0 ID=cds-MCP9536140.1;Parent=gene-NND05_00975;Dbxref=NCBI_GP:MCP9536140.1;Name=MCP9536140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_00975;product=outer membrane beta-barrel family protein;protein_id=MCP9536140.1;transl_table=11 JANDXE010000001.1 Genbank gene 259081 259962 . - . ID=gene-NND05_00980;Name=NND05_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00980 JANDXE010000001.1 Protein Homology CDS 259081 259962 . - 0 ID=cds-MCP9536141.1;Parent=gene-NND05_00980;Dbxref=NCBI_GP:MCP9536141.1;Name=MCP9536141.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_089142961.1;locus_tag=NND05_00980;product=proline iminopeptidase-family hydrolase;protein_id=MCP9536141.1;transl_table=11 JANDXE010000001.1 Genbank gene 260017 260706 . - . ID=gene-NND05_00985;Name=NND05_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00985 JANDXE010000001.1 Protein Homology CDS 260017 260706 . - 0 ID=cds-MCP9536142.1;Parent=gene-NND05_00985;Dbxref=NCBI_GP:MCP9536142.1;Name=MCP9536142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859874.1;locus_tag=NND05_00985;product=DUF1016 domain-containing protein;protein_id=MCP9536142.1;transl_table=11 JANDXE010000001.1 Genbank gene 260908 261510 . + . ID=gene-NND05_00990;Name=NND05_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00990 JANDXE010000001.1 Protein Homology CDS 260908 261510 . + 0 ID=cds-MCP9536143.1;Parent=gene-NND05_00990;Dbxref=NCBI_GP:MCP9536143.1;Name=MCP9536143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847064.1;locus_tag=NND05_00990;product=riboflavin synthase;protein_id=MCP9536143.1;transl_table=11 JANDXE010000001.1 Genbank gene 261697 262566 . + . ID=gene-NND05_00995;Name=NND05_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_00995 JANDXE010000001.1 Protein Homology CDS 261697 262566 . + 0 ID=cds-MCP9536144.1;Parent=gene-NND05_00995;Dbxref=NCBI_GP:MCP9536144.1;Name=MCP9536144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351705.1;locus_tag=NND05_00995;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=MCP9536144.1;transl_table=11 JANDXE010000001.1 Genbank gene 262624 263646 . + . ID=gene-NND05_01000;Name=NND05_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01000 JANDXE010000001.1 Protein Homology CDS 262624 263646 . + 0 ID=cds-MCP9536145.1;Parent=gene-NND05_01000;Dbxref=NCBI_GP:MCP9536145.1;Name=MCP9536145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345484.1;locus_tag=NND05_01000;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=MCP9536145.1;transl_table=11 JANDXE010000001.1 Genbank gene 263682 265385 . + . ID=gene-NND05_01005;Name=NND05_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01005 JANDXE010000001.1 Protein Homology CDS 263682 265385 . + 0 ID=cds-MCP9536146.1;Parent=gene-NND05_01005;Dbxref=NCBI_GP:MCP9536146.1;Name=MCP9536146.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847060.1;locus_tag=NND05_01005;product=acyl-CoA dehydrogenase family protein;protein_id=MCP9536146.1;transl_table=11 JANDXE010000001.1 Genbank gene 266094 266759 . + . ID=gene-NND05_01010;Name=NND05_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01010 JANDXE010000001.1 Protein Homology CDS 266094 266759 . + 0 ID=cds-MCP9536147.1;Parent=gene-NND05_01010;Dbxref=NCBI_GP:MCP9536147.1;Name=MCP9536147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026121.2;locus_tag=NND05_01010;product=DUF4476 domain-containing protein;protein_id=MCP9536147.1;transl_table=11 JANDXE010000001.1 Genbank gene 267131 268465 . + . ID=gene-NND05_01015;Name=NND05_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01015 JANDXE010000001.1 Protein Homology CDS 267131 268465 . + 0 ID=cds-MCP9536148.1;Parent=gene-NND05_01015;Dbxref=NCBI_GP:MCP9536148.1;Name=MCP9536148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372578.1;locus_tag=NND05_01015;product=TolC family protein;protein_id=MCP9536148.1;transl_table=11 JANDXE010000001.1 Genbank gene 268511 269692 . + . ID=gene-NND05_01020;Name=NND05_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01020 JANDXE010000001.1 Protein Homology CDS 268511 269692 . + 0 ID=cds-MCP9536149.1;Parent=gene-NND05_01020;Dbxref=NCBI_GP:MCP9536149.1;Name=MCP9536149.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411749.1;locus_tag=NND05_01020;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9536149.1;transl_table=11 JANDXE010000001.1 Genbank gene 269717 270490 . + . ID=gene-NND05_01025;Name=NND05_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01025 JANDXE010000001.1 Protein Homology CDS 269717 270490 . + 0 ID=cds-MCP9536150.1;Parent=gene-NND05_01025;Dbxref=NCBI_GP:MCP9536150.1;Name=MCP9536150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008619123.1;locus_tag=NND05_01025;product=ABC transporter ATP-binding protein;protein_id=MCP9536150.1;transl_table=11 JANDXE010000001.1 Genbank gene 270502 271740 . + . ID=gene-NND05_01030;Name=NND05_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01030 JANDXE010000001.1 Protein Homology CDS 270502 271740 . + 0 ID=cds-MCP9536151.1;Parent=gene-NND05_01030;Dbxref=NCBI_GP:MCP9536151.1;Name=MCP9536151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010537780.1;locus_tag=NND05_01030;product=ABC transporter permease;protein_id=MCP9536151.1;transl_table=11 JANDXE010000001.1 Genbank gene 271843 272574 . + . ID=gene-NND05_01035;Name=NND05_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01035 JANDXE010000001.1 Protein Homology CDS 271843 272574 . + 0 ID=cds-MCP9536152.1;Parent=gene-NND05_01035;Dbxref=NCBI_GP:MCP9536152.1;Name=MCP9536152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008762145.1;locus_tag=NND05_01035;product=methyltransferase domain-containing protein;protein_id=MCP9536152.1;transl_table=11 JANDXE010000001.1 Genbank gene 272669 273322 . - . ID=gene-NND05_01040;Name=NND05_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01040 JANDXE010000001.1 Protein Homology CDS 272669 273322 . - 0 ID=cds-MCP9536153.1;Parent=gene-NND05_01040;Dbxref=NCBI_GP:MCP9536153.1;Name=MCP9536153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015547671.1;locus_tag=NND05_01040;product=MgtC/SapB family protein;protein_id=MCP9536153.1;transl_table=11 JANDXE010000001.1 Genbank gene 273496 275193 . + . ID=gene-NND05_01045;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=NND05_01045 JANDXE010000001.1 Protein Homology CDS 273496 275193 . + 0 ID=cds-MCP9536154.1;Parent=gene-NND05_01045;Dbxref=NCBI_GP:MCP9536154.1;Name=MCP9536154.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008124039.1;locus_tag=NND05_01045;product=energy-dependent translational throttle protein EttA;protein_id=MCP9536154.1;transl_table=11 JANDXE010000001.1 Genbank gene 275505 276212 . - . ID=gene-NND05_01050;Name=NND05_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01050 JANDXE010000001.1 Protein Homology CDS 275505 276212 . - 0 ID=cds-MCP9536155.1;Parent=gene-NND05_01050;Dbxref=NCBI_GP:MCP9536155.1;Name=MCP9536155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024811.2;locus_tag=NND05_01050;product=HAD family hydrolase;protein_id=MCP9536155.1;transl_table=11 JANDXE010000001.1 Genbank gene 276574 277734 . - . ID=gene-NND05_01055;Name=NND05_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01055 JANDXE010000001.1 Protein Homology CDS 276574 277734 . - 0 ID=cds-MCP9536156.1;Parent=gene-NND05_01055;Dbxref=NCBI_GP:MCP9536156.1;Name=MCP9536156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008140687.1;locus_tag=NND05_01055;product=glycerate kinase;protein_id=MCP9536156.1;transl_table=11 JANDXE010000001.1 Genbank gene 277755 278486 . - . ID=gene-NND05_01060;Name=NND05_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01060 JANDXE010000001.1 Protein Homology CDS 277755 278486 . - 0 ID=cds-MCP9536157.1;Parent=gene-NND05_01060;Dbxref=NCBI_GP:MCP9536157.1;Name=MCP9536157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464681.1;locus_tag=NND05_01060;product=response regulator transcription factor;protein_id=MCP9536157.1;transl_table=11 JANDXE010000001.1 Genbank gene 278495 280015 . - . ID=gene-NND05_01065;Name=NND05_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01065 JANDXE010000001.1 Protein Homology CDS 278495 280015 . - 0 ID=cds-MCP9536158.1;Parent=gene-NND05_01065;Dbxref=NCBI_GP:MCP9536158.1;Name=MCP9536158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004290895.1;locus_tag=NND05_01065;product=HAMP domain-containing histidine kinase;protein_id=MCP9536158.1;transl_table=11 JANDXE010000001.1 Genbank gene 280056 280799 . - . ID=gene-NND05_01070;Name=NND05_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01070 JANDXE010000001.1 GeneMarkS-2+ CDS 280056 280799 . - 0 ID=cds-MCP9536159.1;Parent=gene-NND05_01070;Dbxref=NCBI_GP:MCP9536159.1;Name=MCP9536159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01070;product=hypothetical protein;protein_id=MCP9536159.1;transl_table=11 JANDXE010000001.1 Genbank gene 280994 283042 . + . ID=gene-NND05_01075;Name=NND05_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01075 JANDXE010000001.1 Protein Homology CDS 280994 283042 . + 0 ID=cds-MCP9536160.1;Parent=gene-NND05_01075;Dbxref=NCBI_GP:MCP9536160.1;Name=MCP9536160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_01075;product=outer membrane beta-barrel family protein;protein_id=MCP9536160.1;transl_table=11 JANDXE010000001.1 Genbank gene 283321 283758 . + . ID=gene-NND05_01080;Name=NND05_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01080 JANDXE010000001.1 Protein Homology CDS 283321 283758 . + 0 ID=cds-MCP9536161.1;Parent=gene-NND05_01080;Dbxref=NCBI_GP:MCP9536161.1;Name=MCP9536161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849558.1;locus_tag=NND05_01080;product=Hsp20/alpha crystallin family protein;protein_id=MCP9536161.1;transl_table=11 JANDXE010000001.1 Genbank gene 283997 285982 . + . ID=gene-NND05_01085;Name=NND05_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01085 JANDXE010000001.1 Protein Homology CDS 283997 285982 . + 0 ID=cds-MCP9536162.1;Parent=gene-NND05_01085;Dbxref=NCBI_GP:MCP9536162.1;Name=MCP9536162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901217.1;locus_tag=NND05_01085;product=heavy metal translocating P-type ATPase;protein_id=MCP9536162.1;transl_table=11 JANDXE010000001.1 Genbank gene 287187 288023 . + . ID=gene-NND05_01090;Name=NND05_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01090 JANDXE010000001.1 Protein Homology CDS 287187 288023 . + 0 ID=cds-MCP9536163.1;Parent=gene-NND05_01090;Dbxref=NCBI_GP:MCP9536163.1;Name=MCP9536163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=NND05_01090;product=CPBP family intramembrane metalloprotease;protein_id=MCP9536163.1;transl_table=11 JANDXE010000001.1 Genbank gene 288093 288566 . - . ID=gene-NND05_01095;Name=NND05_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01095 JANDXE010000001.1 Protein Homology CDS 288093 288566 . - 0 ID=cds-MCP9536164.1;Parent=gene-NND05_01095;Dbxref=NCBI_GP:MCP9536164.1;Name=MCP9536164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848268.1;locus_tag=NND05_01095;product=PaaI family thioesterase;protein_id=MCP9536164.1;transl_table=11 JANDXE010000001.1 Genbank gene 288755 289441 . + . ID=gene-NND05_01100;Name=NND05_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01100 JANDXE010000001.1 Protein Homology CDS 288755 289441 . + 0 ID=cds-MCP9536165.1;Parent=gene-NND05_01100;Dbxref=NCBI_GP:MCP9536165.1;Name=MCP9536165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008769180.1;locus_tag=NND05_01100;product=response regulator transcription factor;protein_id=MCP9536165.1;transl_table=11 JANDXE010000001.1 Genbank gene 289494 290870 . + . ID=gene-NND05_01105;Name=NND05_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01105 JANDXE010000001.1 Protein Homology CDS 289494 290870 . + 0 ID=cds-MCP9536166.1;Parent=gene-NND05_01105;Dbxref=NCBI_GP:MCP9536166.1;Name=MCP9536166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004306149.1;locus_tag=NND05_01105;product=ATP-binding protein;protein_id=MCP9536166.1;transl_table=11 JANDXE010000001.1 Genbank gene 291031 293700 . + . ID=gene-NND05_01110;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=NND05_01110 JANDXE010000001.1 Protein Homology CDS 291031 293700 . + 0 ID=cds-MCP9536167.1;Parent=gene-NND05_01110;Dbxref=NCBI_GP:MCP9536167.1;Name=MCP9536167.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008647463.1;locus_tag=NND05_01110;product=magnesium-translocating P-type ATPase;protein_id=MCP9536167.1;transl_table=11 JANDXE010000001.1 Genbank gene 293975 295015 . + . ID=gene-NND05_01115;Name=NND05_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01115 JANDXE010000001.1 Protein Homology CDS 293975 295015 . + 0 ID=cds-MCP9536168.1;Parent=gene-NND05_01115;Dbxref=NCBI_GP:MCP9536168.1;Name=MCP9536168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848269.1;locus_tag=NND05_01115;product=carbohydrate porin;protein_id=MCP9536168.1;transl_table=11 JANDXE010000001.1 Genbank gene 295074 296048 . - . ID=gene-NND05_01120;Name=NND05_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01120 JANDXE010000001.1 Protein Homology CDS 295074 296048 . - 0 ID=cds-MCP9536169.1;Parent=gene-NND05_01120;Dbxref=NCBI_GP:MCP9536169.1;Name=MCP9536169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020418.2;locus_tag=NND05_01120;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9536169.1;transl_table=11 JANDXE010000001.1 Genbank gene 296261 298297 . - . ID=gene-NND05_01125;Name=NND05_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01125 JANDXE010000001.1 Protein Homology CDS 296261 298297 . - 0 ID=cds-MCP9536170.1;Parent=gene-NND05_01125;Dbxref=NCBI_GP:MCP9536170.1;Name=MCP9536170.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145108.1;locus_tag=NND05_01125;product=family 20 glycosylhydrolase;protein_id=MCP9536170.1;transl_table=11 JANDXE010000001.1 Genbank gene 298309 298692 . - . ID=gene-NND05_01130;Name=NND05_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01130 JANDXE010000001.1 Protein Homology CDS 298309 298692 . - 0 ID=cds-MCP9536171.1;Parent=gene-NND05_01130;Dbxref=NCBI_GP:MCP9536171.1;Name=MCP9536171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007845935.1;locus_tag=NND05_01130;product=L-rhamnose mutarotase;protein_id=MCP9536171.1;transl_table=11 JANDXE010000001.1 Genbank gene 298932 300587 . + . ID=gene-NND05_01135;Name=NND05_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01135 JANDXE010000001.1 Protein Homology CDS 298932 300587 . + 0 ID=cds-MCP9536172.1;Parent=gene-NND05_01135;Dbxref=NCBI_GP:MCP9536172.1;Name=MCP9536172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848272.1;locus_tag=NND05_01135;product=carboxylesterase family protein;protein_id=MCP9536172.1;transl_table=11 JANDXE010000001.1 Genbank gene 300590 300883 . + . ID=gene-NND05_01140;Name=NND05_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01140 JANDXE010000001.1 Protein Homology CDS 300590 300883 . + 0 ID=cds-MCP9536173.1;Parent=gene-NND05_01140;Dbxref=NCBI_GP:MCP9536173.1;Name=MCP9536173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848273.1;locus_tag=NND05_01140;product=hypothetical protein;protein_id=MCP9536173.1;transl_table=11 JANDXE010000001.1 Genbank gene 300984 301448 . + . ID=gene-NND05_01145;Name=NND05_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01145 JANDXE010000001.1 Protein Homology CDS 300984 301448 . + 0 ID=cds-MCP9536174.1;Parent=gene-NND05_01145;Dbxref=NCBI_GP:MCP9536174.1;Name=MCP9536174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848274.1;locus_tag=NND05_01145;product=copper resistance protein NlpE;protein_id=MCP9536174.1;transl_table=11 JANDXE010000001.1 Genbank gene 301762 302751 . + . ID=gene-NND05_01150;Name=NND05_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01150 JANDXE010000001.1 Protein Homology CDS 301762 302751 . + 0 ID=cds-MCP9536175.1;Parent=gene-NND05_01150;Dbxref=NCBI_GP:MCP9536175.1;Name=MCP9536175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900526.1;locus_tag=NND05_01150;product=TerC family protein;protein_id=MCP9536175.1;transl_table=11 JANDXE010000001.1 Genbank gene 302918 304573 . - . ID=gene-NND05_01155;Name=NND05_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01155 JANDXE010000001.1 Protein Homology CDS 302918 304573 . - 0 ID=cds-MCP9536176.1;Parent=gene-NND05_01155;Dbxref=NCBI_GP:MCP9536176.1;Name=MCP9536176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848277.1;locus_tag=NND05_01155;product=kinase;protein_id=MCP9536176.1;transl_table=11 JANDXE010000001.1 Genbank gene 304629 305138 . - . ID=gene-NND05_01160;Name=NND05_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01160 JANDXE010000001.1 Protein Homology CDS 304629 305138 . - 0 ID=cds-MCP9536177.1;Parent=gene-NND05_01160;Dbxref=NCBI_GP:MCP9536177.1;Name=MCP9536177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848278.1;locus_tag=NND05_01160;product=C-GCAxxG-C-C family protein;protein_id=MCP9536177.1;transl_table=11 JANDXE010000001.1 Genbank gene 305212 306528 . - . ID=gene-NND05_01165;Name=NND05_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01165 JANDXE010000001.1 Protein Homology CDS 305212 306528 . - 0 ID=cds-MCP9536178.1;Parent=gene-NND05_01165;Dbxref=NCBI_GP:MCP9536178.1;Name=MCP9536178.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848279.1;locus_tag=NND05_01165;product=AAA family ATPase;protein_id=MCP9536178.1;transl_table=11 JANDXE010000001.1 Genbank gene 306533 307546 . - . ID=gene-NND05_01170;Name=NND05_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01170 JANDXE010000001.1 Protein Homology CDS 306533 307546 . - 0 ID=cds-MCP9536179.1;Parent=gene-NND05_01170;Dbxref=NCBI_GP:MCP9536179.1;Name=MCP9536179.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911306.1;locus_tag=NND05_01170;product=aspartate-semialdehyde dehydrogenase;protein_id=MCP9536179.1;transl_table=11 JANDXE010000001.1 Genbank gene 307933 308316 . + . ID=gene-NND05_01175;Name=NND05_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01175 JANDXE010000001.1 Protein Homology CDS 307933 308316 . + 0 ID=cds-MCP9536180.1;Parent=gene-NND05_01175;Dbxref=NCBI_GP:MCP9536180.1;Name=MCP9536180.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF016296.2;locus_tag=NND05_01175;product=LytTR family transcriptional regulator DNA-binding domain-containing protein;protein_id=MCP9536180.1;transl_table=11 JANDXE010000001.1 Genbank gene 308313 309275 . + . ID=gene-NND05_01180;Name=NND05_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01180 JANDXE010000001.1 GeneMarkS-2+ CDS 308313 309275 . + 0 ID=cds-MCP9536181.1;Parent=gene-NND05_01180;Dbxref=NCBI_GP:MCP9536181.1;Name=MCP9536181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01180;product=phosphodiester glycosidase family protein;protein_id=MCP9536181.1;transl_table=11 JANDXE010000001.1 Genbank gene 309293 309979 . - . ID=gene-NND05_01185;Name=NND05_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01185 JANDXE010000001.1 GeneMarkS-2+ CDS 309293 309979 . - 0 ID=cds-MCP9536182.1;Parent=gene-NND05_01185;Dbxref=NCBI_GP:MCP9536182.1;Name=MCP9536182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01185;product=hypothetical protein;protein_id=MCP9536182.1;transl_table=11 JANDXE010000001.1 Genbank gene 309992 310648 . - . ID=gene-NND05_01190;Name=NND05_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01190 JANDXE010000001.1 Protein Homology CDS 309992 310648 . - 0 ID=cds-MCP9536183.1;Parent=gene-NND05_01190;Dbxref=NCBI_GP:MCP9536183.1;Name=MCP9536183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025029.2;locus_tag=NND05_01190;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=MCP9536183.1;transl_table=11 JANDXE010000001.1 Genbank gene 311172 311432 . + . ID=gene-NND05_01195;Name=NND05_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01195 JANDXE010000001.1 GeneMarkS-2+ CDS 311172 311432 . + 0 ID=cds-MCP9536184.1;Parent=gene-NND05_01195;Dbxref=NCBI_GP:MCP9536184.1;Name=MCP9536184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01195;product=hypothetical protein;protein_id=MCP9536184.1;transl_table=11 JANDXE010000001.1 Genbank gene 311602 312135 . + . ID=gene-NND05_01200;Name=NND05_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01200 JANDXE010000001.1 GeneMarkS-2+ CDS 311602 312135 . + 0 ID=cds-MCP9536185.1;Parent=gene-NND05_01200;Dbxref=NCBI_GP:MCP9536185.1;Name=MCP9536185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01200;product=hypothetical protein;protein_id=MCP9536185.1;transl_table=11 JANDXE010000001.1 Genbank gene 312232 313014 . - . ID=gene-NND05_01205;Name=NND05_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01205 JANDXE010000001.1 Protein Homology CDS 312232 313014 . - 0 ID=cds-MCP9536186.1;Parent=gene-NND05_01205;Dbxref=NCBI_GP:MCP9536186.1;Name=MCP9536186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013357.2;locus_tag=NND05_01205;product=glycoside hydrolase family 25 protein;protein_id=MCP9536186.1;transl_table=11 JANDXE010000001.1 Genbank gene 313126 313296 . - . ID=gene-NND05_01210;Name=NND05_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01210 JANDXE010000001.1 Protein Homology CDS 313126 313296 . - 0 ID=cds-MCP9536187.1;Parent=gene-NND05_01210;Dbxref=NCBI_GP:MCP9536187.1;Name=MCP9536187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848407.1;locus_tag=NND05_01210;product=hypothetical protein;protein_id=MCP9536187.1;transl_table=11 JANDXE010000001.1 Genbank gene 313308 315737 . - . ID=gene-NND05_01215;Name=NND05_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01215 JANDXE010000001.1 GeneMarkS-2+ CDS 313308 315737 . - 0 ID=cds-MCP9536188.1;Parent=gene-NND05_01215;Dbxref=NCBI_GP:MCP9536188.1;Name=MCP9536188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01215;product=hypothetical protein;protein_id=MCP9536188.1;transl_table=11 JANDXE010000001.1 Genbank gene 315737 316300 . - . ID=gene-NND05_01220;Name=NND05_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01220 JANDXE010000001.1 GeneMarkS-2+ CDS 315737 316300 . - 0 ID=cds-MCP9536189.1;Parent=gene-NND05_01220;Dbxref=NCBI_GP:MCP9536189.1;Name=MCP9536189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01220;product=hypothetical protein;protein_id=MCP9536189.1;transl_table=11 JANDXE010000001.1 Genbank gene 316445 316786 . - . ID=gene-NND05_01225;Name=NND05_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01225 JANDXE010000001.1 GeneMarkS-2+ CDS 316445 316786 . - 0 ID=cds-MCP9536190.1;Parent=gene-NND05_01225;Dbxref=NCBI_GP:MCP9536190.1;Name=MCP9536190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01225;product=hypothetical protein;protein_id=MCP9536190.1;transl_table=11 JANDXE010000001.1 Genbank gene 316967 317113 . - . ID=gene-NND05_01230;Name=NND05_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01230 JANDXE010000001.1 Protein Homology CDS 316967 317113 . - 0 ID=cds-MCP9536191.1;Parent=gene-NND05_01230;Dbxref=NCBI_GP:MCP9536191.1;Name=MCP9536191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014043.2;locus_tag=NND05_01230;product=DUF86 domain-containing protein;protein_id=MCP9536191.1;transl_table=11 JANDXE010000001.1 Genbank pseudogene 317981 318467 . - . ID=gene-NND05_01235;Name=NND05_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_01235;pseudo=true JANDXE010000001.1 Protein Homology CDS 317981 318467 . - 0 ID=cds-NND05_01235;Parent=gene-NND05_01235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709810.1;locus_tag=NND05_01235;product=PD-(D/E)XK nuclease domain-containing protein;pseudo=true;transl_table=11 JANDXE010000001.1 Genbank gene 319060 320199 . - . ID=gene-NND05_01240;Name=NND05_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01240 JANDXE010000001.1 Protein Homology CDS 319060 320199 . - 0 ID=cds-MCP9536192.1;Parent=gene-NND05_01240;Dbxref=NCBI_GP:MCP9536192.1;Name=MCP9536192.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008775330.1;locus_tag=NND05_01240;product=MFS transporter;protein_id=MCP9536192.1;transl_table=11 JANDXE010000001.1 Genbank gene 320401 322533 . + . ID=gene-NND05_01245;Name=NND05_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01245 JANDXE010000001.1 Protein Homology CDS 320401 322533 . + 0 ID=cds-MCP9536193.1;Parent=gene-NND05_01245;Dbxref=NCBI_GP:MCP9536193.1;Name=MCP9536193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340105.1;locus_tag=NND05_01245;product=cation:proton antiporter;protein_id=MCP9536193.1;transl_table=11 JANDXE010000001.1 Genbank gene 323406 323771 . - . ID=gene-NND05_01250;Name=NND05_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01250 JANDXE010000001.1 Protein Homology CDS 323406 323771 . - 0 ID=cds-MCP9536194.1;Parent=gene-NND05_01250;Dbxref=NCBI_GP:MCP9536194.1;Name=MCP9536194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037850.2;locus_tag=NND05_01250;product=hypothetical protein;protein_id=MCP9536194.1;transl_table=11 JANDXE010000001.1 Genbank gene 324412 324681 . + . ID=gene-NND05_01255;Name=NND05_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01255 JANDXE010000001.1 GeneMarkS-2+ CDS 324412 324681 . + 0 ID=cds-MCP9536195.1;Parent=gene-NND05_01255;Dbxref=NCBI_GP:MCP9536195.1;Name=MCP9536195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01255;product=hypothetical protein;protein_id=MCP9536195.1;transl_table=11 JANDXE010000001.1 Genbank gene 324719 326323 . + . ID=gene-NND05_01260;Name=NND05_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01260 JANDXE010000001.1 Protein Homology CDS 324719 326323 . + 0 ID=cds-MCP9536196.1;Parent=gene-NND05_01260;Dbxref=NCBI_GP:MCP9536196.1;Name=MCP9536196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_01260;product=AraC family transcriptional regulator;protein_id=MCP9536196.1;transl_table=11 JANDXE010000001.1 Genbank gene 326504 329041 . + . ID=gene-NND05_01265;Name=NND05_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01265 JANDXE010000001.1 Protein Homology CDS 326504 329041 . + 0 ID=cds-MCP9536197.1;Parent=gene-NND05_01265;Dbxref=NCBI_GP:MCP9536197.1;Name=MCP9536197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849128.1;locus_tag=NND05_01265;product=glycoside hydrolase family 31 protein;protein_id=MCP9536197.1;transl_table=11 JANDXE010000001.1 Genbank gene 329529 330473 . + . ID=gene-NND05_01270;Name=NND05_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01270 JANDXE010000001.1 Protein Homology CDS 329529 330473 . + 0 ID=cds-MCP9536198.1;Parent=gene-NND05_01270;Dbxref=NCBI_GP:MCP9536198.1;Name=MCP9536198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900224.1;locus_tag=NND05_01270;product=CNNM domain-containing protein;protein_id=MCP9536198.1;transl_table=11 JANDXE010000001.1 Genbank gene 330750 332162 . - . ID=gene-NND05_01275;Name=NND05_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01275 JANDXE010000001.1 Protein Homology CDS 330750 332162 . - 0 ID=cds-MCP9536199.1;Parent=gene-NND05_01275;Dbxref=NCBI_GP:MCP9536199.1;Name=MCP9536199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017390.2;locus_tag=NND05_01275;product=M56 family metallopeptidase;protein_id=MCP9536199.1;transl_table=11 JANDXE010000001.1 Genbank gene 332255 332617 . - . ID=gene-NND05_01280;Name=NND05_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01280 JANDXE010000001.1 Protein Homology CDS 332255 332617 . - 0 ID=cds-MCP9536200.1;Parent=gene-NND05_01280;Dbxref=NCBI_GP:MCP9536200.1;Name=MCP9536200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848305.1;locus_tag=NND05_01280;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=MCP9536200.1;transl_table=11 JANDXE010000001.1 Genbank gene 332872 333078 . + . ID=gene-NND05_01285;Name=NND05_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01285 JANDXE010000001.1 GeneMarkS-2+ CDS 332872 333078 . + 0 ID=cds-MCP9536201.1;Parent=gene-NND05_01285;Dbxref=NCBI_GP:MCP9536201.1;Name=MCP9536201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01285;product=hypothetical protein;protein_id=MCP9536201.1;transl_table=11 JANDXE010000001.1 Genbank gene 333253 334002 . + . ID=gene-NND05_01290;Name=NND05_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01290 JANDXE010000001.1 Protein Homology CDS 333253 334002 . + 0 ID=cds-MCP9536202.1;Parent=gene-NND05_01290;Dbxref=NCBI_GP:MCP9536202.1;Name=MCP9536202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848307.1;locus_tag=NND05_01290;product=ABC transporter ATP-binding protein;protein_id=MCP9536202.1;transl_table=11 JANDXE010000001.1 Genbank gene 334117 334959 . + . ID=gene-NND05_01295;Name=NND05_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01295 JANDXE010000001.1 Protein Homology CDS 334117 334959 . + 0 ID=cds-MCP9536203.1;Parent=gene-NND05_01295;Dbxref=NCBI_GP:MCP9536203.1;Name=MCP9536203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848308.1;locus_tag=NND05_01295;product=S1-like domain-containing RNA-binding protein;protein_id=MCP9536203.1;transl_table=11 JANDXE010000001.1 Genbank gene 335070 336632 . - . ID=gene-NND05_01300;Name=NND05_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01300 JANDXE010000001.1 Protein Homology CDS 335070 336632 . - 0 ID=cds-MCP9536204.1;Parent=gene-NND05_01300;Dbxref=NCBI_GP:MCP9536204.1;Name=MCP9536204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849129.1;locus_tag=NND05_01300;product=ATP-binding protein;protein_id=MCP9536204.1;transl_table=11 ##sequence-region JANDXE010000021.1 1 72110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000021.1 Genbank region 1 72110 . + . ID=JANDXE010000021.1:1..72110;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000021.1 Genbank gene 578 1036 . + . ID=gene-NND05_10530;Name=NND05_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10530 JANDXE010000021.1 Protein Homology CDS 578 1036 . + 0 ID=cds-MCP9537971.1;Parent=gene-NND05_10530;Dbxref=NCBI_GP:MCP9537971.1;Name=MCP9537971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223843.1;locus_tag=NND05_10530;product=transposase;protein_id=MCP9537971.1;transl_table=11 JANDXE010000021.1 Genbank gene 1362 1787 . + . ID=gene-NND05_10535;Name=NND05_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10535 JANDXE010000021.1 GeneMarkS-2+ CDS 1362 1787 . + 0 ID=cds-MCP9537972.1;Parent=gene-NND05_10535;Dbxref=NCBI_GP:MCP9537972.1;Name=MCP9537972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10535;product=hypothetical protein;protein_id=MCP9537972.1;transl_table=11 JANDXE010000021.1 Genbank gene 2151 2642 . + . ID=gene-NND05_10540;Name=NND05_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10540 JANDXE010000021.1 GeneMarkS-2+ CDS 2151 2642 . + 0 ID=cds-MCP9537973.1;Parent=gene-NND05_10540;Dbxref=NCBI_GP:MCP9537973.1;Name=MCP9537973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10540;product=hypothetical protein;protein_id=MCP9537973.1;transl_table=11 JANDXE010000021.1 Genbank gene 2857 3375 . + . ID=gene-NND05_10545;Name=NND05_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10545 JANDXE010000021.1 GeneMarkS-2+ CDS 2857 3375 . + 0 ID=cds-MCP9537974.1;Parent=gene-NND05_10545;Dbxref=NCBI_GP:MCP9537974.1;Name=MCP9537974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10545;product=hypothetical protein;protein_id=MCP9537974.1;transl_table=11 JANDXE010000021.1 Genbank gene 3729 4163 . + . ID=gene-NND05_10550;Name=NND05_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10550 JANDXE010000021.1 Protein Homology CDS 3729 4163 . + 0 ID=cds-MCP9537975.1;Parent=gene-NND05_10550;Dbxref=NCBI_GP:MCP9537975.1;Name=MCP9537975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846451.1;locus_tag=NND05_10550;product=hypothetical protein;protein_id=MCP9537975.1;transl_table=11 JANDXE010000021.1 Genbank gene 4145 6637 . + . ID=gene-NND05_10555;Name=NND05_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10555 JANDXE010000021.1 Protein Homology CDS 4145 6637 . + 0 ID=cds-MCP9537976.1;Parent=gene-NND05_10555;Dbxref=NCBI_GP:MCP9537976.1;Name=MCP9537976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849107.1;locus_tag=NND05_10555;product=hypothetical protein;protein_id=MCP9537976.1;transl_table=11 JANDXE010000021.1 Genbank gene 6703 7263 . + . ID=gene-NND05_10560;Name=NND05_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10560 JANDXE010000021.1 Protein Homology CDS 6703 7263 . + 0 ID=cds-MCP9537977.1;Parent=gene-NND05_10560;Dbxref=NCBI_GP:MCP9537977.1;Name=MCP9537977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848882.1;locus_tag=NND05_10560;product=DUF5675 family protein;protein_id=MCP9537977.1;transl_table=11 JANDXE010000021.1 Genbank gene 7385 8212 . - . ID=gene-NND05_10565;Name=NND05_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10565 JANDXE010000021.1 Protein Homology CDS 7385 8212 . - 0 ID=cds-MCP9537978.1;Parent=gene-NND05_10565;Dbxref=NCBI_GP:MCP9537978.1;Name=MCP9537978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847351.1;locus_tag=NND05_10565;product=C4-type zinc ribbon domain-containing protein;protein_id=MCP9537978.1;transl_table=11 JANDXE010000021.1 Genbank gene 8250 9107 . - . ID=gene-NND05_10570;Name=NND05_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10570 JANDXE010000021.1 Protein Homology CDS 8250 9107 . - 0 ID=cds-MCP9537979.1;Parent=gene-NND05_10570;Dbxref=NCBI_GP:MCP9537979.1;Name=MCP9537979.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375580.1;locus_tag=NND05_10570;product=Nif3-like dinuclear metal center hexameric protein;protein_id=MCP9537979.1;transl_table=11 JANDXE010000021.1 Genbank gene 9263 10369 . + . ID=gene-NND05_10575;Name=NND05_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10575 JANDXE010000021.1 Protein Homology CDS 9263 10369 . + 0 ID=cds-MCP9537980.1;Parent=gene-NND05_10575;Dbxref=NCBI_GP:MCP9537980.1;Name=MCP9537980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847349.1;locus_tag=NND05_10575;product=agmatine deiminase family protein;protein_id=MCP9537980.1;transl_table=11 JANDXE010000021.1 Genbank gene 10736 11611 . + . ID=gene-NND05_10580;Name=NND05_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10580 JANDXE010000021.1 Protein Homology CDS 10736 11611 . + 0 ID=cds-MCP9537981.1;Parent=gene-NND05_10580;Dbxref=NCBI_GP:MCP9537981.1;Name=MCP9537981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847348.1;locus_tag=NND05_10580;product=carbon-nitrogen hydrolase;protein_id=MCP9537981.1;transl_table=11 JANDXE010000021.1 Genbank gene 11638 12546 . + . ID=gene-NND05_10585;Name=NND05_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10585 JANDXE010000021.1 Protein Homology CDS 11638 12546 . + 0 ID=cds-MCP9537982.1;Parent=gene-NND05_10585;Dbxref=NCBI_GP:MCP9537982.1;Name=MCP9537982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847346.1;locus_tag=NND05_10585;product=AEC family transporter;protein_id=MCP9537982.1;transl_table=11 JANDXE010000021.1 Genbank gene 12601 14385 . + . ID=gene-NND05_10590;Name=NND05_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10590 JANDXE010000021.1 GeneMarkS-2+ CDS 12601 14385 . + 0 ID=cds-MCP9537983.1;Parent=gene-NND05_10590;Dbxref=NCBI_GP:MCP9537983.1;Name=MCP9537983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_10590;product=outer membrane beta-barrel family protein;protein_id=MCP9537983.1;transl_table=11 JANDXE010000021.1 Genbank gene 14756 15793 . - . ID=gene-NND05_10595;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=NND05_10595 JANDXE010000021.1 Protein Homology CDS 14756 15793 . - 0 ID=cds-MCP9537984.1;Parent=gene-NND05_10595;Dbxref=NCBI_GP:MCP9537984.1;Name=MCP9537984.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343186.1;locus_tag=NND05_10595;product=aspartate--ammonia ligase;protein_id=MCP9537984.1;transl_table=11 JANDXE010000021.1 Genbank gene 16092 16165 . + . ID=gene-NND05_10600;Name=NND05_10600;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10600 JANDXE010000021.1 tRNAscan-SE tRNA 16092 16165 . + . ID=rna-NND05_10600;Parent=gene-NND05_10600;anticodon=(pos:16126..16128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10600;product=tRNA-Arg JANDXE010000021.1 tRNAscan-SE exon 16092 16165 . + . ID=exon-NND05_10600-1;Parent=rna-NND05_10600;anticodon=(pos:16126..16128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10600;product=tRNA-Arg JANDXE010000021.1 Genbank gene 16194 17417 . + . ID=gene-NND05_10605;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=NND05_10605 JANDXE010000021.1 Protein Homology CDS 16194 17417 . + 0 ID=cds-MCP9537985.1;Parent=gene-NND05_10605;Dbxref=NCBI_GP:MCP9537985.1;Name=MCP9537985.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346259.1;locus_tag=NND05_10605;product=peptidase T;protein_id=MCP9537985.1;transl_table=11 JANDXE010000021.1 Genbank gene 17510 19771 . + . ID=gene-NND05_10610;Name=NND05_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10610 JANDXE010000021.1 Protein Homology CDS 17510 19771 . + 0 ID=cds-MCP9537986.1;Parent=gene-NND05_10610;Dbxref=NCBI_GP:MCP9537986.1;Name=MCP9537986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897170.1;locus_tag=NND05_10610;product=cation:proton antiporter;protein_id=MCP9537986.1;transl_table=11 JANDXE010000021.1 Genbank gene 19857 20747 . - . ID=gene-NND05_10615;Name=NND05_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10615 JANDXE010000021.1 Protein Homology CDS 19857 20747 . - 0 ID=cds-MCP9537987.1;Parent=gene-NND05_10615;Dbxref=NCBI_GP:MCP9537987.1;Name=MCP9537987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412038.1;locus_tag=NND05_10615;product=DUF5715 family protein;protein_id=MCP9537987.1;transl_table=11 JANDXE010000021.1 Genbank gene 20883 21854 . + . ID=gene-NND05_10620;Name=NND05_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10620 JANDXE010000021.1 Protein Homology CDS 20883 21854 . + 0 ID=cds-MCP9537988.1;Parent=gene-NND05_10620;Dbxref=NCBI_GP:MCP9537988.1;Name=MCP9537988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847239.1;locus_tag=NND05_10620;product=PhoH family protein;protein_id=MCP9537988.1;transl_table=11 JANDXE010000021.1 Genbank gene 21871 22821 . + . ID=gene-NND05_10625;Name=NND05_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10625 JANDXE010000021.1 Protein Homology CDS 21871 22821 . + 0 ID=cds-MCP9537989.1;Parent=gene-NND05_10625;Dbxref=NCBI_GP:MCP9537989.1;Name=MCP9537989.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351458.1;locus_tag=NND05_10625;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MCP9537989.1;transl_table=11 JANDXE010000021.1 Genbank gene 22869 23603 . + . ID=gene-NND05_10630;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NND05_10630 JANDXE010000021.1 Protein Homology CDS 22869 23603 . + 0 ID=cds-MCP9537990.1;Parent=gene-NND05_10630;Dbxref=NCBI_GP:MCP9537990.1;Name=MCP9537990.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383531.1;locus_tag=NND05_10630;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=MCP9537990.1;transl_table=11 JANDXE010000021.1 Genbank gene 23616 24362 . + . ID=gene-NND05_10635;Name=NND05_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10635 JANDXE010000021.1 Protein Homology CDS 23616 24362 . + 0 ID=cds-MCP9537991.1;Parent=gene-NND05_10635;Dbxref=NCBI_GP:MCP9537991.1;Name=MCP9537991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359863.1;locus_tag=NND05_10635;product=shikimate dehydrogenase;protein_id=MCP9537991.1;transl_table=11 JANDXE010000021.1 Genbank gene 24422 25570 . + . ID=gene-NND05_10640;Name=NND05_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10640 JANDXE010000021.1 Protein Homology CDS 24422 25570 . + 0 ID=cds-MCP9537992.1;Parent=gene-NND05_10640;Dbxref=NCBI_GP:MCP9537992.1;Name=MCP9537992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435103.1;locus_tag=NND05_10640;product=AIR synthase-related protein;protein_id=MCP9537992.1;transl_table=11 JANDXE010000021.1 Genbank gene 25589 26698 . + . ID=gene-NND05_10645;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NND05_10645 JANDXE010000021.1 Protein Homology CDS 25589 26698 . + 0 ID=cds-MCP9537993.1;Parent=gene-NND05_10645;Dbxref=NCBI_GP:MCP9537993.1;Name=MCP9537993.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847233.1;locus_tag=NND05_10645;product=peptide chain release factor 1;protein_id=MCP9537993.1;transl_table=11 JANDXE010000021.1 Genbank gene 26866 27711 . + . ID=gene-NND05_10650;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NND05_10650 JANDXE010000021.1 Protein Homology CDS 26866 27711 . + 0 ID=cds-MCP9537994.1;Parent=gene-NND05_10650;Dbxref=NCBI_GP:MCP9537994.1;Name=MCP9537994.1;Ontology_term=GO:0009220,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341877.1;locus_tag=NND05_10650;product=orotidine-5'-phosphate decarboxylase;protein_id=MCP9537994.1;transl_table=11 JANDXE010000021.1 Genbank gene 28040 29074 . + . ID=gene-NND05_10655;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NND05_10655 JANDXE010000021.1 Protein Homology CDS 28040 29074 . + 0 ID=cds-MCP9537995.1;Parent=gene-NND05_10655;Dbxref=NCBI_GP:MCP9537995.1;Name=MCP9537995.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383163.1;locus_tag=NND05_10655;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=MCP9537995.1;transl_table=11 JANDXE010000021.1 Genbank gene 29083 30471 . + . ID=gene-NND05_10660;Name=NND05_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10660 JANDXE010000021.1 Protein Homology CDS 29083 30471 . + 0 ID=cds-MCP9537996.1;Parent=gene-NND05_10660;Dbxref=NCBI_GP:MCP9537996.1;Name=MCP9537996.1;Ontology_term=GO:0006633,GO:0009245,GO:0008759,GO:0016836;gbkey=CDS;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA,hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911276.1;locus_tag=NND05_10660;product=bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase;protein_id=MCP9537996.1;transl_table=11 JANDXE010000021.1 Genbank gene 30487 31257 . + . ID=gene-NND05_10665;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NND05_10665 JANDXE010000021.1 Protein Homology CDS 30487 31257 . + 0 ID=cds-MCP9537997.1;Parent=gene-NND05_10665;Dbxref=NCBI_GP:MCP9537997.1;Name=MCP9537997.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341873.1;locus_tag=NND05_10665;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=MCP9537997.1;transl_table=11 JANDXE010000021.1 Genbank gene 31351 32262 . + . ID=gene-NND05_10670;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NND05_10670 JANDXE010000021.1 Protein Homology CDS 31351 32262 . + 0 ID=cds-MCP9537998.1;Parent=gene-NND05_10670;Dbxref=NCBI_GP:MCP9537998.1;Name=MCP9537998.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920201.1;locus_tag=NND05_10670;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MCP9537998.1;transl_table=11 JANDXE010000021.1 Genbank gene 32323 32997 . - . ID=gene-NND05_10675;Name=NND05_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10675 JANDXE010000021.1 Protein Homology CDS 32323 32997 . - 0 ID=cds-MCP9537999.1;Parent=gene-NND05_10675;Dbxref=NCBI_GP:MCP9537999.1;Name=MCP9537999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005675863.1;locus_tag=NND05_10675;product=ABC transporter ATP-binding protein;protein_id=MCP9537999.1;transl_table=11 JANDXE010000021.1 Genbank gene 33055 35451 . - . ID=gene-NND05_10680;Name=NND05_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10680 JANDXE010000021.1 Protein Homology CDS 33055 35451 . - 0 ID=cds-MCP9538000.1;Parent=gene-NND05_10680;Dbxref=NCBI_GP:MCP9538000.1;Name=MCP9538000.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.2;locus_tag=NND05_10680;product=FtsX-like permease family protein;protein_id=MCP9538000.1;transl_table=11 JANDXE010000021.1 Genbank gene 35541 36791 . - . ID=gene-NND05_10685;Name=NND05_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10685 JANDXE010000021.1 Protein Homology CDS 35541 36791 . - 0 ID=cds-MCP9538001.1;Parent=gene-NND05_10685;Dbxref=NCBI_GP:MCP9538001.1;Name=MCP9538001.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008022403.1;locus_tag=NND05_10685;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9538001.1;transl_table=11 JANDXE010000021.1 Genbank gene 36811 38271 . - . ID=gene-NND05_10690;Name=NND05_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10690 JANDXE010000021.1 Protein Homology CDS 36811 38271 . - 0 ID=cds-MCP9538002.1;Parent=gene-NND05_10690;Dbxref=NCBI_GP:MCP9538002.1;Name=MCP9538002.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018452811.1;locus_tag=NND05_10690;product=TolC family protein;protein_id=MCP9538002.1;transl_table=11 JANDXE010000021.1 Genbank gene 38439 39716 . - . ID=gene-NND05_10695;Name=NND05_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10695 JANDXE010000021.1 Protein Homology CDS 38439 39716 . - 0 ID=cds-MCP9538003.1;Parent=gene-NND05_10695;Dbxref=NCBI_GP:MCP9538003.1;Name=MCP9538003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_10695;product=ATP-binding protein;protein_id=MCP9538003.1;transl_table=11 JANDXE010000021.1 Genbank gene 39856 41280 . - . ID=gene-NND05_10700;Name=NND05_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10700 JANDXE010000021.1 Protein Homology CDS 39856 41280 . - 0 ID=cds-MCP9538004.1;Parent=gene-NND05_10700;Dbxref=NCBI_GP:MCP9538004.1;Name=MCP9538004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292361.1;locus_tag=NND05_10700;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9538004.1;transl_table=11 JANDXE010000021.1 Genbank gene 41493 41890 . + . ID=gene-NND05_10705;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NND05_10705 JANDXE010000021.1 cmsearch tmRNA 41493 41890 . + . ID=rna-NND05_10705;Parent=gene-NND05_10705;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_10705;product=transfer-messenger RNA JANDXE010000021.1 cmsearch exon 41493 41890 . + . ID=exon-NND05_10705-1;Parent=rna-NND05_10705;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_10705;product=transfer-messenger RNA JANDXE010000021.1 Genbank gene 42492 43238 . + . ID=gene-NND05_10710;Name=NND05_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10710 JANDXE010000021.1 Protein Homology CDS 42492 43238 . + 0 ID=cds-MCP9538005.1;Parent=gene-NND05_10710;Dbxref=NCBI_GP:MCP9538005.1;Name=MCP9538005.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NND05_10710;product=restriction endonuclease subunit S;protein_id=MCP9538005.1;transl_table=11 JANDXE010000021.1 Genbank gene 43162 43746 . - . ID=gene-NND05_10715;Name=NND05_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10715 JANDXE010000021.1 Protein Homology CDS 43162 43746 . - 0 ID=cds-MCP9538006.1;Parent=gene-NND05_10715;Dbxref=NCBI_GP:MCP9538006.1;Name=MCP9538006.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NND05_10715;product=restriction endonuclease subunit S;protein_id=MCP9538006.1;transl_table=11 JANDXE010000021.1 Genbank gene 43796 44935 . - . ID=gene-NND05_10720;Name=NND05_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10720 JANDXE010000021.1 Protein Homology CDS 43796 44935 . - 0 ID=cds-MCP9538007.1;Parent=gene-NND05_10720;Dbxref=NCBI_GP:MCP9538007.1;Name=MCP9538007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018665856.1;locus_tag=NND05_10720;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9538007.1;transl_table=11 JANDXE010000021.1 Genbank gene 44940 46598 . - . ID=gene-NND05_10725;Name=NND05_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10725 JANDXE010000021.1 Protein Homology CDS 44940 46598 . - 0 ID=cds-MCP9538008.1;Parent=gene-NND05_10725;Dbxref=NCBI_GP:MCP9538008.1;Name=MCP9538008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897199.1;locus_tag=NND05_10725;product=type I restriction-modification system subunit M;protein_id=MCP9538008.1;transl_table=11 JANDXE010000021.1 Genbank gene 46609 49866 . - . ID=gene-NND05_10730;Name=NND05_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10730 JANDXE010000021.1 Protein Homology CDS 46609 49866 . - 0 ID=cds-MCP9538009.1;Parent=gene-NND05_10730;Dbxref=NCBI_GP:MCP9538009.1;Name=MCP9538009.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005652536.1;locus_tag=NND05_10730;product=HsdR family type I site-specific deoxyribonuclease;protein_id=MCP9538009.1;transl_table=11 JANDXE010000021.1 Genbank gene 50552 51379 . - . ID=gene-NND05_10735;Name=NND05_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10735 JANDXE010000021.1 Protein Homology CDS 50552 51379 . - 0 ID=cds-MCP9538010.1;Parent=gene-NND05_10735;Dbxref=NCBI_GP:MCP9538010.1;Name=MCP9538010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_10735;product=helix-turn-helix domain-containing protein;protein_id=MCP9538010.1;transl_table=11 JANDXE010000021.1 Genbank gene 51502 53196 . - . ID=gene-NND05_10740;Name=NND05_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10740 JANDXE010000021.1 Protein Homology CDS 51502 53196 . - 0 ID=cds-MCP9538011.1;Parent=gene-NND05_10740;Dbxref=NCBI_GP:MCP9538011.1;Name=MCP9538011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846925.1;locus_tag=NND05_10740;product=MFS transporter;protein_id=MCP9538011.1;transl_table=11 JANDXE010000021.1 Genbank gene 53219 54274 . - . ID=gene-NND05_10745;Name=NND05_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10745 JANDXE010000021.1 Protein Homology CDS 53219 54274 . - 0 ID=cds-MCP9538012.1;Parent=gene-NND05_10745;Dbxref=NCBI_GP:MCP9538012.1;Name=MCP9538012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009037809.1;locus_tag=NND05_10745;product=HlyD family secretion protein;protein_id=MCP9538012.1;transl_table=11 JANDXE010000021.1 Genbank gene 54428 55753 . - . ID=gene-NND05_10750;Name=NND05_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10750 JANDXE010000021.1 Protein Homology CDS 54428 55753 . - 0 ID=cds-MCP9538013.1;Parent=gene-NND05_10750;Dbxref=NCBI_GP:MCP9538013.1;Name=MCP9538013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007557871.1;locus_tag=NND05_10750;product=TolC family protein;protein_id=MCP9538013.1;transl_table=11 JANDXE010000021.1 Genbank gene 56190 57026 . - . ID=gene-NND05_10755;Name=NND05_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10755 JANDXE010000021.1 Protein Homology CDS 56190 57026 . - 0 ID=cds-MCP9538014.1;Parent=gene-NND05_10755;Dbxref=NCBI_GP:MCP9538014.1;Name=MCP9538014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007842475.1;locus_tag=NND05_10755;product=glycoside hydrolase family 16 protein;protein_id=MCP9538014.1;transl_table=11 JANDXE010000021.1 Genbank gene 57054 57473 . - . ID=gene-NND05_10760;Name=NND05_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10760 JANDXE010000021.1 Protein Homology CDS 57054 57473 . - 0 ID=cds-MCP9538015.1;Parent=gene-NND05_10760;Dbxref=NCBI_GP:MCP9538015.1;Name=MCP9538015.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=NND05_10760;product=GNAT family N-acetyltransferase;protein_id=MCP9538015.1;transl_table=11 JANDXE010000021.1 Genbank gene 57697 59175 . - . ID=gene-NND05_10765;Name=NND05_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10765 JANDXE010000021.1 Protein Homology CDS 57697 59175 . - 0 ID=cds-MCP9538016.1;Parent=gene-NND05_10765;Dbxref=NCBI_GP:MCP9538016.1;Name=MCP9538016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564213.1;locus_tag=NND05_10765;product=fucose isomerase;protein_id=MCP9538016.1;transl_table=11 JANDXE010000021.1 Genbank gene 59451 61997 . + . ID=gene-NND05_10770;Name=NND05_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10770 JANDXE010000021.1 Protein Homology CDS 59451 61997 . + 0 ID=cds-MCP9538017.1;Parent=gene-NND05_10770;Dbxref=NCBI_GP:MCP9538017.1;Name=MCP9538017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967480.1;locus_tag=NND05_10770;product=transglycosylase domain-containing protein;protein_id=MCP9538017.1;transl_table=11 JANDXE010000021.1 Genbank gene 62007 63743 . + . ID=gene-NND05_10775;Name=NND05_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10775 JANDXE010000021.1 Protein Homology CDS 62007 63743 . + 0 ID=cds-MCP9538018.1;Parent=gene-NND05_10775;Dbxref=NCBI_GP:MCP9538018.1;Name=MCP9538018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282498.1;locus_tag=NND05_10775;product=AAA family ATPase;protein_id=MCP9538018.1;transl_table=11 JANDXE010000021.1 Genbank gene 63847 66267 . - . ID=gene-NND05_10780;Name=NND05_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10780 JANDXE010000021.1 Protein Homology CDS 63847 66267 . - 0 ID=cds-MCP9538019.1;Parent=gene-NND05_10780;Dbxref=NCBI_GP:MCP9538019.1;Name=MCP9538019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897838.1;locus_tag=NND05_10780;product=glycoside hydrolase family 95 protein;protein_id=MCP9538019.1;transl_table=11 JANDXE010000021.1 Genbank gene 66466 69318 . - . ID=gene-NND05_10785;Name=NND05_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10785 JANDXE010000021.1 Protein Homology CDS 66466 69318 . - 0 ID=cds-MCP9538020.1;Parent=gene-NND05_10785;Dbxref=NCBI_GP:MCP9538020.1;Name=MCP9538020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565444.1;locus_tag=NND05_10785;product=putative LPS assembly protein LptD;protein_id=MCP9538020.1;transl_table=11 JANDXE010000021.1 Genbank gene 69356 69898 . - . ID=gene-NND05_10790;Name=NND05_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10790 JANDXE010000021.1 Protein Homology CDS 69356 69898 . - 0 ID=cds-MCP9538021.1;Parent=gene-NND05_10790;Dbxref=NCBI_GP:MCP9538021.1;Name=MCP9538021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919917.1;locus_tag=NND05_10790;product=HDIG domain-containing protein;protein_id=MCP9538021.1;transl_table=11 JANDXE010000021.1 Genbank gene 69910 71685 . - . ID=gene-NND05_10795;Name=NND05_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10795 JANDXE010000021.1 Protein Homology CDS 69910 71685 . - 0 ID=cds-MCP9538022.1;Parent=gene-NND05_10795;Dbxref=NCBI_GP:MCP9538022.1;Name=MCP9538022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378375.1;locus_tag=NND05_10795;product=oxaloacetate decarboxylase;protein_id=MCP9538022.1;transl_table=11 ##sequence-region JANDXE010000022.1 1 71273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000022.1 Genbank region 1 71273 . + . ID=JANDXE010000022.1:1..71273;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000022.1 Genbank gene 472 741 . + . ID=gene-NND05_10800;Name=NND05_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10800 JANDXE010000022.1 Protein Homology CDS 472 741 . + 0 ID=cds-MCP9538023.1;Parent=gene-NND05_10800;Dbxref=NCBI_GP:MCP9538023.1;Name=MCP9538023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014548.2;locus_tag=NND05_10800;product=Bro-N domain-containing protein;protein_id=MCP9538023.1;transl_table=11 JANDXE010000022.1 Genbank gene 861 1439 . + . ID=gene-NND05_10805;Name=NND05_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10805 JANDXE010000022.1 Protein Homology CDS 861 1439 . + 0 ID=cds-MCP9538024.1;Parent=gene-NND05_10805;Dbxref=NCBI_GP:MCP9538024.1;Name=MCP9538024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847712.1;locus_tag=NND05_10805;product=GNAT family N-acetyltransferase;protein_id=MCP9538024.1;transl_table=11 JANDXE010000022.1 Genbank gene 1460 2836 . - . ID=gene-NND05_10810;Name=NND05_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10810 JANDXE010000022.1 Protein Homology CDS 1460 2836 . - 0 ID=cds-MCP9538025.1;Parent=gene-NND05_10810;Dbxref=NCBI_GP:MCP9538025.1;Name=MCP9538025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847711.1;locus_tag=NND05_10810;product=sodium:alanine symporter family protein;protein_id=MCP9538025.1;transl_table=11 JANDXE010000022.1 Genbank gene 2875 3456 . - . ID=gene-NND05_10815;Name=NND05_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10815 JANDXE010000022.1 Protein Homology CDS 2875 3456 . - 0 ID=cds-MCP9538026.1;Parent=gene-NND05_10815;Dbxref=NCBI_GP:MCP9538026.1;Name=MCP9538026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847710.1;locus_tag=NND05_10815;product=DUF4230 domain-containing protein;protein_id=MCP9538026.1;transl_table=11 JANDXE010000022.1 Genbank gene 3498 4181 . - . ID=gene-NND05_10820;Name=NND05_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10820 JANDXE010000022.1 Protein Homology CDS 3498 4181 . - 0 ID=cds-MCP9538027.1;Parent=gene-NND05_10820;Dbxref=NCBI_GP:MCP9538027.1;Name=MCP9538027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671460.1;locus_tag=NND05_10820;product=DUF4230 domain-containing protein;protein_id=MCP9538027.1;transl_table=11 JANDXE010000022.1 Genbank gene 4301 4777 . - . ID=gene-NND05_10825;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=NND05_10825 JANDXE010000022.1 Protein Homology CDS 4301 4777 . - 0 ID=cds-MCP9538028.1;Parent=gene-NND05_10825;Dbxref=NCBI_GP:MCP9538028.1;Name=MCP9538028.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566266.1;locus_tag=NND05_10825;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=MCP9538028.1;transl_table=11 JANDXE010000022.1 Genbank gene 4789 5484 . - . ID=gene-NND05_10830;Name=NND05_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10830 JANDXE010000022.1 Protein Homology CDS 4789 5484 . - 0 ID=cds-MCP9538029.1;Parent=gene-NND05_10830;Dbxref=NCBI_GP:MCP9538029.1;Name=MCP9538029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846255.1;locus_tag=NND05_10830;product=tetratricopeptide repeat protein;protein_id=MCP9538029.1;transl_table=11 JANDXE010000022.1 Genbank gene 5641 6741 . + . ID=gene-NND05_10835;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=NND05_10835 JANDXE010000022.1 Protein Homology CDS 5641 6741 . + 0 ID=cds-MCP9538030.1;Parent=gene-NND05_10835;Dbxref=NCBI_GP:MCP9538030.1;Name=MCP9538030.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369447.1;locus_tag=NND05_10835;product=DNA replication and repair protein RecF;protein_id=MCP9538030.1;transl_table=11 JANDXE010000022.1 Genbank gene 6753 7043 . + . ID=gene-NND05_10840;Name=NND05_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10840 JANDXE010000022.1 Protein Homology CDS 6753 7043 . + 0 ID=cds-MCP9538031.1;Parent=gene-NND05_10840;Dbxref=NCBI_GP:MCP9538031.1;Name=MCP9538031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376823.1;locus_tag=NND05_10840;product=DUF721 domain-containing protein;protein_id=MCP9538031.1;transl_table=11 JANDXE010000022.1 Genbank gene 7174 7785 . - . ID=gene-NND05_10845;Name=NND05_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10845 JANDXE010000022.1 Protein Homology CDS 7174 7785 . - 0 ID=cds-MCP9538032.1;Parent=gene-NND05_10845;Dbxref=NCBI_GP:MCP9538032.1;Name=MCP9538032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367982.1;locus_tag=NND05_10845;product=DUF4738 domain-containing protein;protein_id=MCP9538032.1;transl_table=11 JANDXE010000022.1 Genbank gene 8404 8943 . - . ID=gene-NND05_10850;Name=NND05_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10850 JANDXE010000022.1 Protein Homology CDS 8404 8943 . - 0 ID=cds-MCP9538033.1;Parent=gene-NND05_10850;Dbxref=NCBI_GP:MCP9538033.1;Name=MCP9538033.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281267.1;locus_tag=NND05_10850;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=MCP9538033.1;transl_table=11 JANDXE010000022.1 Genbank gene 8946 10610 . - . ID=gene-NND05_10855;Name=NND05_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10855 JANDXE010000022.1 Protein Homology CDS 8946 10610 . - 0 ID=cds-MCP9538034.1;Parent=gene-NND05_10855;Dbxref=NCBI_GP:MCP9538034.1;Name=MCP9538034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463824.1;locus_tag=NND05_10855;product=S41 family peptidase;protein_id=MCP9538034.1;transl_table=11 JANDXE010000022.1 Genbank gene 10665 11114 . - . ID=gene-NND05_10860;Name=NND05_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10860 JANDXE010000022.1 Protein Homology CDS 10665 11114 . - 0 ID=cds-MCP9538035.1;Parent=gene-NND05_10860;Dbxref=NCBI_GP:MCP9538035.1;Name=MCP9538035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846261.1;locus_tag=NND05_10860;product=dCMP deaminase family protein;protein_id=MCP9538035.1;transl_table=11 JANDXE010000022.1 Genbank gene 11180 13288 . - . ID=gene-NND05_10865;Name=NND05_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10865 JANDXE010000022.1 Protein Homology CDS 11180 13288 . - 0 ID=cds-MCP9538036.1;Parent=gene-NND05_10865;Dbxref=NCBI_GP:MCP9538036.1;Name=MCP9538036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899023.1;locus_tag=NND05_10865;product=M3 family metallopeptidase;protein_id=MCP9538036.1;transl_table=11 JANDXE010000022.1 Genbank gene 13330 14004 . - . ID=gene-NND05_10870;Name=NND05_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10870 JANDXE010000022.1 Protein Homology CDS 13330 14004 . - 0 ID=cds-MCP9538037.1;Parent=gene-NND05_10870;Dbxref=NCBI_GP:MCP9538037.1;Name=MCP9538037.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=NND05_10870;product=Crp/Fnr family transcriptional regulator;protein_id=MCP9538037.1;transl_table=11 JANDXE010000022.1 Genbank gene 14037 15053 . - . ID=gene-NND05_10875;Name=NND05_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10875 JANDXE010000022.1 Protein Homology CDS 14037 15053 . - 0 ID=cds-MCP9538038.1;Parent=gene-NND05_10875;Dbxref=NCBI_GP:MCP9538038.1;Name=MCP9538038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264117.1;locus_tag=NND05_10875;product=FAD:protein FMN transferase;protein_id=MCP9538038.1;transl_table=11 JANDXE010000022.1 Genbank gene 15067 15780 . - . ID=gene-NND05_10880;Name=NND05_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10880 JANDXE010000022.1 Protein Homology CDS 15067 15780 . - 0 ID=cds-MCP9538039.1;Parent=gene-NND05_10880;Dbxref=NCBI_GP:MCP9538039.1;Name=MCP9538039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376806.1;locus_tag=NND05_10880;product=DUF6048 family protein;protein_id=MCP9538039.1;transl_table=11 JANDXE010000022.1 Genbank gene 15791 16273 . - . ID=gene-NND05_10885;Name=NND05_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10885 JANDXE010000022.1 Protein Homology CDS 15791 16273 . - 0 ID=cds-MCP9538040.1;Parent=gene-NND05_10885;Dbxref=NCBI_GP:MCP9538040.1;Name=MCP9538040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846266.1;locus_tag=NND05_10885;product=DUF6452 family protein;protein_id=MCP9538040.1;transl_table=11 JANDXE010000022.1 Genbank gene 16261 17232 . - . ID=gene-NND05_10890;Name=NND05_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10890 JANDXE010000022.1 Protein Homology CDS 16261 17232 . - 0 ID=cds-MCP9538041.1;Parent=gene-NND05_10890;Dbxref=NCBI_GP:MCP9538041.1;Name=MCP9538041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846267.1;locus_tag=NND05_10890;product=glycosyltransferase;protein_id=MCP9538041.1;transl_table=11 JANDXE010000022.1 Genbank gene 17271 17903 . - . ID=gene-NND05_10895;Name=NND05_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10895 JANDXE010000022.1 Protein Homology CDS 17271 17903 . - 0 ID=cds-MCP9538042.1;Parent=gene-NND05_10895;Dbxref=NCBI_GP:MCP9538042.1;Name=MCP9538042.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025227.2;locus_tag=NND05_10895;product=DUF4199 domain-containing protein;protein_id=MCP9538042.1;transl_table=11 JANDXE010000022.1 Genbank gene 18062 18135 . - . ID=gene-NND05_10900;Name=NND05_10900;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10900 JANDXE010000022.1 tRNAscan-SE tRNA 18062 18135 . - . ID=rna-NND05_10900;Parent=gene-NND05_10900;anticodon=(pos:complement(18099..18101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10900;product=tRNA-Thr JANDXE010000022.1 tRNAscan-SE exon 18062 18135 . - . ID=exon-NND05_10900-1;Parent=rna-NND05_10900;anticodon=(pos:complement(18099..18101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10900;product=tRNA-Thr JANDXE010000022.1 Genbank gene 18438 21020 . - . ID=gene-NND05_10905;Name=NND05_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10905 JANDXE010000022.1 Protein Homology CDS 18438 21020 . - 0 ID=cds-MCP9538043.1;Parent=gene-NND05_10905;Dbxref=NCBI_GP:MCP9538043.1;Name=MCP9538043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345718.1;locus_tag=NND05_10905;product=Smr/MutS family protein;protein_id=MCP9538043.1;transl_table=11 JANDXE010000022.1 Genbank gene 21050 21718 . - . ID=gene-NND05_10910;Name=NND05_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10910 JANDXE010000022.1 Protein Homology CDS 21050 21718 . - 0 ID=cds-MCP9538044.1;Parent=gene-NND05_10910;Dbxref=NCBI_GP:MCP9538044.1;Name=MCP9538044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846270.1;locus_tag=NND05_10910;product=thiamine phosphate synthase;protein_id=MCP9538044.1;transl_table=11 JANDXE010000022.1 Genbank gene 21743 22621 . - . ID=gene-NND05_10915;Name=NND05_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10915 JANDXE010000022.1 Protein Homology CDS 21743 22621 . - 0 ID=cds-MCP9538045.1;Parent=gene-NND05_10915;Dbxref=NCBI_GP:MCP9538045.1;Name=MCP9538045.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846272.1;locus_tag=NND05_10915;product=radical SAM protein;protein_id=MCP9538045.1;transl_table=11 JANDXE010000022.1 Genbank gene 22692 23516 . - . ID=gene-NND05_10920;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=NND05_10920 JANDXE010000022.1 Protein Homology CDS 22692 23516 . - 0 ID=cds-MCP9538046.1;Parent=gene-NND05_10920;Dbxref=NCBI_GP:MCP9538046.1;Name=MCP9538046.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007562913.1;locus_tag=NND05_10920;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MCP9538046.1;transl_table=11 JANDXE010000022.1 Genbank gene 23798 23882 . - . ID=gene-NND05_10925;Name=NND05_10925;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10925 JANDXE010000022.1 tRNAscan-SE tRNA 23798 23882 . - . ID=rna-NND05_10925;Parent=gene-NND05_10925;anticodon=(pos:complement(23846..23848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10925;product=tRNA-Ser JANDXE010000022.1 tRNAscan-SE exon 23798 23882 . - . ID=exon-NND05_10925-1;Parent=rna-NND05_10925;anticodon=(pos:complement(23846..23848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10925;product=tRNA-Ser JANDXE010000022.1 Genbank gene 24657 24741 . - . ID=gene-NND05_10930;Name=NND05_10930;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10930 JANDXE010000022.1 tRNAscan-SE tRNA 24657 24741 . - . ID=rna-NND05_10930;Parent=gene-NND05_10930;anticodon=(pos:complement(24705..24707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10930;product=tRNA-Ser JANDXE010000022.1 tRNAscan-SE exon 24657 24741 . - . ID=exon-NND05_10930-1;Parent=rna-NND05_10930;anticodon=(pos:complement(24705..24707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10930;product=tRNA-Ser JANDXE010000022.1 Genbank gene 25061 25939 . - . ID=gene-NND05_10935;Name=NND05_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10935 JANDXE010000022.1 Protein Homology CDS 25061 25939 . - 0 ID=cds-MCP9538047.1;Parent=gene-NND05_10935;Dbxref=NCBI_GP:MCP9538047.1;Name=MCP9538047.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462317.1;locus_tag=NND05_10935;product=FAD-dependent thymidylate synthase;protein_id=MCP9538047.1;transl_table=11 JANDXE010000022.1 Genbank gene 26155 26835 . + . ID=gene-NND05_10940;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=NND05_10940 JANDXE010000022.1 Protein Homology CDS 26155 26835 . + 0 ID=cds-MCP9538048.1;Parent=gene-NND05_10940;Dbxref=NCBI_GP:MCP9538048.1;Name=MCP9538048.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846275.1;locus_tag=NND05_10940;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=MCP9538048.1;transl_table=11 JANDXE010000022.1 Genbank gene 26878 28293 . - . ID=gene-NND05_10945;Name=NND05_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10945 JANDXE010000022.1 Protein Homology CDS 26878 28293 . - 0 ID=cds-MCP9538049.1;Parent=gene-NND05_10945;Dbxref=NCBI_GP:MCP9538049.1;Name=MCP9538049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846276.1;locus_tag=NND05_10945;product=glycoside hydrolase family 28 protein;protein_id=MCP9538049.1;transl_table=11 JANDXE010000022.1 Genbank gene 28440 28512 . - . ID=gene-NND05_10950;Name=NND05_10950;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_10950 JANDXE010000022.1 tRNAscan-SE tRNA 28440 28512 . - . ID=rna-NND05_10950;Parent=gene-NND05_10950;anticodon=(pos:complement(28477..28479));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10950;product=tRNA-Phe JANDXE010000022.1 tRNAscan-SE exon 28440 28512 . - . ID=exon-NND05_10950-1;Parent=rna-NND05_10950;anticodon=(pos:complement(28477..28479));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_10950;product=tRNA-Phe JANDXE010000022.1 Genbank gene 28652 29761 . - . ID=gene-NND05_10955;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NND05_10955 JANDXE010000022.1 Protein Homology CDS 28652 29761 . - 0 ID=cds-MCP9538050.1;Parent=gene-NND05_10955;Dbxref=NCBI_GP:MCP9538050.1;Name=MCP9538050.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370047.1;locus_tag=NND05_10955;product=thiamine-phosphate kinase;protein_id=MCP9538050.1;transl_table=11 JANDXE010000022.1 Genbank gene 29804 30613 . - . ID=gene-NND05_10960;Name=NND05_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10960 JANDXE010000022.1 Protein Homology CDS 29804 30613 . - 0 ID=cds-MCP9538051.1;Parent=gene-NND05_10960;Dbxref=NCBI_GP:MCP9538051.1;Name=MCP9538051.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228775.1;locus_tag=NND05_10960;product=purine-nucleoside phosphorylase;protein_id=MCP9538051.1;transl_table=11 JANDXE010000022.1 Genbank gene 30498 31667 . - . ID=gene-NND05_10965;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=NND05_10965 JANDXE010000022.1 Protein Homology CDS 30498 31667 . - 0 ID=cds-MCP9538052.1;Parent=gene-NND05_10965;Dbxref=NCBI_GP:MCP9538052.1;Name=MCP9538052.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411948.1;locus_tag=NND05_10965;product=tetraacyldisaccharide 4'-kinase;protein_id=MCP9538052.1;transl_table=11 JANDXE010000022.1 Genbank gene 31704 33488 . - . ID=gene-NND05_10970;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=NND05_10970 JANDXE010000022.1 Protein Homology CDS 31704 33488 . - 0 ID=cds-MCP9538053.1;Parent=gene-NND05_10970;Dbxref=NCBI_GP:MCP9538053.1;Name=MCP9538053.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016021;gbkey=CDS;gene=sppA;go_component=integral component of membrane|0016021||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283696.1;locus_tag=NND05_10970;product=signal peptide peptidase SppA;protein_id=MCP9538053.1;transl_table=11 JANDXE010000022.1 Genbank gene 33663 34475 . + . ID=gene-NND05_10975;Name=NND05_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10975 JANDXE010000022.1 Protein Homology CDS 33663 34475 . + 0 ID=cds-MCP9538054.1;Parent=gene-NND05_10975;Dbxref=NCBI_GP:MCP9538054.1;Name=MCP9538054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846282.1;locus_tag=NND05_10975;product=alpha/beta hydrolase;protein_id=MCP9538054.1;transl_table=11 JANDXE010000022.1 Genbank gene 34645 34917 . + . ID=gene-NND05_10980;Name=NND05_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10980 JANDXE010000022.1 Protein Homology CDS 34645 34917 . + 0 ID=cds-MCP9538055.1;Parent=gene-NND05_10980;Dbxref=NCBI_GP:MCP9538055.1;Name=MCP9538055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346229.1;locus_tag=NND05_10980;product=co-chaperone GroES;protein_id=MCP9538055.1;transl_table=11 JANDXE010000022.1 Genbank gene 34951 36579 . + . ID=gene-NND05_10985;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NND05_10985 JANDXE010000022.1 Protein Homology CDS 34951 36579 . + 0 ID=cds-MCP9538056.1;Parent=gene-NND05_10985;Dbxref=NCBI_GP:MCP9538056.1;Name=MCP9538056.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005941147.1;locus_tag=NND05_10985;product=chaperonin GroEL;protein_id=MCP9538056.1;transl_table=11 JANDXE010000022.1 Genbank gene 36935 37150 . + . ID=gene-NND05_10990;Name=NND05_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10990 JANDXE010000022.1 Protein Homology CDS 36935 37150 . + 0 ID=cds-MCP9538057.1;Parent=gene-NND05_10990;Dbxref=NCBI_GP:MCP9538057.1;Name=MCP9538057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846290.1;locus_tag=NND05_10990;product=transporter;protein_id=MCP9538057.1;transl_table=11 JANDXE010000022.1 Genbank gene 37134 38678 . + . ID=gene-NND05_10995;Name=NND05_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_10995 JANDXE010000022.1 Protein Homology CDS 37134 38678 . + 0 ID=cds-MCP9538058.1;Parent=gene-NND05_10995;Dbxref=NCBI_GP:MCP9538058.1;Name=MCP9538058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372467.1;locus_tag=NND05_10995;product=phosphotransferase;protein_id=MCP9538058.1;transl_table=11 JANDXE010000022.1 Genbank gene 38755 39531 . + . ID=gene-NND05_11000;Name=NND05_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11000 JANDXE010000022.1 Protein Homology CDS 38755 39531 . + 0 ID=cds-MCP9538059.1;Parent=gene-NND05_11000;Dbxref=NCBI_GP:MCP9538059.1;Name=MCP9538059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283433.1;locus_tag=NND05_11000;product=nucleotidyltransferase family protein;protein_id=MCP9538059.1;transl_table=11 JANDXE010000022.1 Genbank gene 39563 41173 . + . ID=gene-NND05_11005;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NND05_11005 JANDXE010000022.1 Protein Homology CDS 39563 41173 . + 0 ID=cds-MCP9538060.1;Parent=gene-NND05_11005;Dbxref=NCBI_GP:MCP9538060.1;Name=MCP9538060.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383348.1;locus_tag=NND05_11005;product=glutamine-hydrolyzing GMP synthase;protein_id=MCP9538060.1;transl_table=11 JANDXE010000022.1 Genbank gene 41359 42222 . - . ID=gene-NND05_11010;Name=NND05_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11010 JANDXE010000022.1 Protein Homology CDS 41359 42222 . - 0 ID=cds-MCP9538061.1;Parent=gene-NND05_11010;Dbxref=NCBI_GP:MCP9538061.1;Name=MCP9538061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847409.1;locus_tag=NND05_11010;product=Abi family protein;protein_id=MCP9538061.1;transl_table=11 JANDXE010000022.1 Genbank gene 43568 43852 . + . ID=gene-NND05_11015;Name=NND05_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11015 JANDXE010000022.1 GeneMarkS-2+ CDS 43568 43852 . + 0 ID=cds-MCP9538062.1;Parent=gene-NND05_11015;Dbxref=NCBI_GP:MCP9538062.1;Name=MCP9538062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11015;product=hypothetical protein;protein_id=MCP9538062.1;transl_table=11 JANDXE010000022.1 Genbank gene 44259 44690 . - . ID=gene-NND05_11020;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=NND05_11020 JANDXE010000022.1 Protein Homology CDS 44259 44690 . - 0 ID=cds-MCP9538063.1;Parent=gene-NND05_11020;Dbxref=NCBI_GP:MCP9538063.1;Name=MCP9538063.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342715.1;locus_tag=NND05_11020;product=large-conductance mechanosensitive channel protein MscL;protein_id=MCP9538063.1;transl_table=11 JANDXE010000022.1 Genbank gene 45107 46138 . + . ID=gene-NND05_11025;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NND05_11025 JANDXE010000022.1 Protein Homology CDS 45107 46138 . + 0 ID=cds-MCP9538064.1;Parent=gene-NND05_11025;Dbxref=NCBI_GP:MCP9538064.1;Name=MCP9538064.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709824.1;locus_tag=NND05_11025;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MCP9538064.1;transl_table=11 JANDXE010000022.1 Genbank gene 46283 47257 . + . ID=gene-NND05_11030;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NND05_11030 JANDXE010000022.1 Protein Homology CDS 46283 47257 . + 0 ID=cds-MCP9538065.1;Parent=gene-NND05_11030;Dbxref=NCBI_GP:MCP9538065.1;Name=MCP9538065.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346493.1;locus_tag=NND05_11030;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MCP9538065.1;transl_table=11 JANDXE010000022.1 Genbank gene 47263 48195 . + . ID=gene-NND05_11035;Name=NND05_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11035 JANDXE010000022.1 Protein Homology CDS 47263 48195 . + 0 ID=cds-MCP9538066.1;Parent=gene-NND05_11035;Dbxref=NCBI_GP:MCP9538066.1;Name=MCP9538066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009161690.1;locus_tag=NND05_11035;product=lipid kinase;protein_id=MCP9538066.1;transl_table=11 JANDXE010000022.1 Genbank gene 48258 48962 . - . ID=gene-NND05_11040;Name=NND05_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11040 JANDXE010000022.1 Protein Homology CDS 48258 48962 . - 0 ID=cds-MCP9538067.1;Parent=gene-NND05_11040;Dbxref=NCBI_GP:MCP9538067.1;Name=MCP9538067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007568870.1;locus_tag=NND05_11040;product=Crp/Fnr family transcriptional regulator;protein_id=MCP9538067.1;transl_table=11 JANDXE010000022.1 Genbank gene 49183 51126 . + . ID=gene-NND05_11045;Name=NND05_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11045 JANDXE010000022.1 Protein Homology CDS 49183 51126 . + 0 ID=cds-MCP9538068.1;Parent=gene-NND05_11045;Dbxref=NCBI_GP:MCP9538068.1;Name=MCP9538068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846300.1;locus_tag=NND05_11045;product=amylo-alpha-1%2C6-glucosidase;protein_id=MCP9538068.1;transl_table=11 JANDXE010000022.1 Genbank gene 51144 52412 . + . ID=gene-NND05_11050;Name=NND05_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11050 JANDXE010000022.1 Protein Homology CDS 51144 52412 . + 0 ID=cds-MCP9538069.1;Parent=gene-NND05_11050;Dbxref=NCBI_GP:MCP9538069.1;Name=MCP9538069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671449.1;locus_tag=NND05_11050;product=glycosyltransferase family 4 protein;protein_id=MCP9538069.1;transl_table=11 JANDXE010000022.1 Genbank gene 52477 53901 . + . ID=gene-NND05_11055;Name=NND05_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11055 JANDXE010000022.1 Protein Homology CDS 52477 53901 . + 0 ID=cds-MCP9538070.1;Parent=gene-NND05_11055;Dbxref=NCBI_GP:MCP9538070.1;Name=MCP9538070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919281.1;locus_tag=NND05_11055;product=alpha-amylase;protein_id=MCP9538070.1;transl_table=11 JANDXE010000022.1 Genbank gene 53972 54148 . - . ID=gene-NND05_11060;Name=NND05_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11060 JANDXE010000022.1 GeneMarkS-2+ CDS 53972 54148 . - 0 ID=cds-MCP9538071.1;Parent=gene-NND05_11060;Dbxref=NCBI_GP:MCP9538071.1;Name=MCP9538071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11060;product=hypothetical protein;protein_id=MCP9538071.1;transl_table=11 JANDXE010000022.1 Genbank gene 54367 54963 . + . ID=gene-NND05_11065;Name=NND05_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11065 JANDXE010000022.1 Protein Homology CDS 54367 54963 . + 0 ID=cds-MCP9538072.1;Parent=gene-NND05_11065;Dbxref=NCBI_GP:MCP9538072.1;Name=MCP9538072.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846319.1;locus_tag=NND05_11065;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9538072.1;transl_table=11 JANDXE010000022.1 Genbank gene 55066 55731 . - . ID=gene-NND05_11070;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NND05_11070 JANDXE010000022.1 Protein Homology CDS 55066 55731 . - 0 ID=cds-MCP9538073.1;Parent=gene-NND05_11070;Dbxref=NCBI_GP:MCP9538073.1;Name=MCP9538073.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411100.1;locus_tag=NND05_11070;product=ribulose-phosphate 3-epimerase;protein_id=MCP9538073.1;transl_table=11 JANDXE010000022.1 Genbank gene 56465 57469 . + . ID=gene-NND05_11075;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NND05_11075 JANDXE010000022.1 Protein Homology CDS 56465 57469 . + 0 ID=cds-MCP9538074.1;Parent=gene-NND05_11075;Dbxref=NCBI_GP:MCP9538074.1;Name=MCP9538074.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846323.1;locus_tag=NND05_11075;product=anthranilate phosphoribosyltransferase;protein_id=MCP9538074.1;transl_table=11 JANDXE010000022.1 Genbank gene 57475 58284 . + . ID=gene-NND05_11080;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=NND05_11080 JANDXE010000022.1 Protein Homology CDS 57475 58284 . + 0 ID=cds-MCP9538075.1;Parent=gene-NND05_11080;Dbxref=NCBI_GP:MCP9538075.1;Name=MCP9538075.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919274.1;locus_tag=NND05_11080;product=indole-3-glycerol phosphate synthase TrpC;protein_id=MCP9538075.1;transl_table=11 JANDXE010000022.1 Genbank gene 58289 58918 . + . ID=gene-NND05_11085;Name=NND05_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11085 JANDXE010000022.1 Protein Homology CDS 58289 58918 . + 0 ID=cds-MCP9538076.1;Parent=gene-NND05_11085;Dbxref=NCBI_GP:MCP9538076.1;Name=MCP9538076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668373.1;locus_tag=NND05_11085;product=phosphoribosylanthranilate isomerase;protein_id=MCP9538076.1;transl_table=11 JANDXE010000022.1 Genbank gene 58929 59705 . + . ID=gene-NND05_11090;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NND05_11090 JANDXE010000022.1 Protein Homology CDS 58929 59705 . + 0 ID=cds-MCP9538077.1;Parent=gene-NND05_11090;Dbxref=NCBI_GP:MCP9538077.1;Name=MCP9538077.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846326.1;locus_tag=NND05_11090;product=tryptophan synthase subunit alpha;protein_id=MCP9538077.1;transl_table=11 JANDXE010000022.1 Genbank gene 59732 60931 . + . ID=gene-NND05_11095;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=NND05_11095 JANDXE010000022.1 Protein Homology CDS 59732 60931 . + 0 ID=cds-MCP9538078.1;Parent=gene-NND05_11095;Dbxref=NCBI_GP:MCP9538078.1;Name=MCP9538078.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846327.1;locus_tag=NND05_11095;product=tryptophan synthase subunit beta;protein_id=MCP9538078.1;transl_table=11 JANDXE010000022.1 Genbank gene 61068 62549 . + . ID=gene-NND05_11100;Name=NND05_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11100 JANDXE010000022.1 Protein Homology CDS 61068 62549 . + 0 ID=cds-MCP9538079.1;Parent=gene-NND05_11100;Dbxref=NCBI_GP:MCP9538079.1;Name=MCP9538079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127232.1;locus_tag=NND05_11100;product=anthranilate synthase component I family protein;protein_id=MCP9538079.1;transl_table=11 JANDXE010000022.1 Genbank gene 62625 63188 . + . ID=gene-NND05_11105;Name=NND05_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11105 JANDXE010000022.1 Protein Homology CDS 62625 63188 . + 0 ID=cds-MCP9538080.1;Parent=gene-NND05_11105;Dbxref=NCBI_GP:MCP9538080.1;Name=MCP9538080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411112.1;locus_tag=NND05_11105;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=MCP9538080.1;transl_table=11 JANDXE010000022.1 Genbank gene 63338 64315 . - . ID=gene-NND05_11110;Name=NND05_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11110 JANDXE010000022.1 Protein Homology CDS 63338 64315 . - 0 ID=cds-MCP9538081.1;Parent=gene-NND05_11110;Dbxref=NCBI_GP:MCP9538081.1;Name=MCP9538081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346510.1;locus_tag=NND05_11110;product=ROK family protein;protein_id=MCP9538081.1;transl_table=11 JANDXE010000022.1 Genbank gene 64494 65171 . + . ID=gene-NND05_11115;Name=NND05_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11115 JANDXE010000022.1 Protein Homology CDS 64494 65171 . + 0 ID=cds-MCP9538082.1;Parent=gene-NND05_11115;Dbxref=NCBI_GP:MCP9538082.1;Name=MCP9538082.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846331.1;locus_tag=NND05_11115;product=LysE family transporter;protein_id=MCP9538082.1;transl_table=11 JANDXE010000022.1 Genbank gene 65175 65729 . + . ID=gene-NND05_11120;Name=NND05_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11120 JANDXE010000022.1 Protein Homology CDS 65175 65729 . + 0 ID=cds-MCP9538083.1;Parent=gene-NND05_11120;Dbxref=NCBI_GP:MCP9538083.1;Name=MCP9538083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846332.1;locus_tag=NND05_11120;product=DUF4924 family protein;protein_id=MCP9538083.1;transl_table=11 JANDXE010000022.1 Genbank gene 65814 67400 . + . ID=gene-NND05_11125;Name=NND05_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11125 JANDXE010000022.1 Protein Homology CDS 65814 67400 . + 0 ID=cds-MCP9538084.1;Parent=gene-NND05_11125;Dbxref=NCBI_GP:MCP9538084.1;Name=MCP9538084.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352154.1;locus_tag=NND05_11125;product=peptide chain release factor 3;protein_id=MCP9538084.1;transl_table=11 JANDXE010000022.1 Genbank gene 67416 69221 . + . ID=gene-NND05_11130;Name=NND05_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11130 JANDXE010000022.1 Protein Homology CDS 67416 69221 . + 0 ID=cds-MCP9538085.1;Parent=gene-NND05_11130;Dbxref=NCBI_GP:MCP9538085.1;Name=MCP9538085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846334.1;locus_tag=NND05_11130;product=chloride channel protein;protein_id=MCP9538085.1;transl_table=11 JANDXE010000022.1 Genbank gene 69242 70255 . + . ID=gene-NND05_11135;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=NND05_11135 JANDXE010000022.1 Protein Homology CDS 69242 70255 . + 0 ID=cds-MCP9538086.1;Parent=gene-NND05_11135;Dbxref=NCBI_GP:MCP9538086.1;Name=MCP9538086.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846335.1;locus_tag=NND05_11135;product=methionyl-tRNA formyltransferase;protein_id=MCP9538086.1;transl_table=11 JANDXE010000022.1 Genbank gene 70300 70872 . + . ID=gene-NND05_11140;Name=NND05_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11140 JANDXE010000022.1 Protein Homology CDS 70300 70872 . + 0 ID=cds-MCP9538087.1;Parent=gene-NND05_11140;Dbxref=NCBI_GP:MCP9538087.1;Name=MCP9538087.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846336.1;locus_tag=NND05_11140;product=L-threonylcarbamoyladenylate synthase;protein_id=MCP9538087.1;transl_table=11 ##sequence-region JANDXE010000023.1 1 66092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000023.1 Genbank region 1 66092 . + . ID=JANDXE010000023.1:1..66092;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000023.1 Genbank gene 115 303 . + . ID=gene-NND05_11145;Name=NND05_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11145 JANDXE010000023.1 Protein Homology CDS 115 303 . + 0 ID=cds-MCP9538088.1;Parent=gene-NND05_11145;Dbxref=NCBI_GP:MCP9538088.1;Name=MCP9538088.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_11145;product=tyrosine-type recombinase/integrase;protein_id=MCP9538088.1;transl_table=11 JANDXE010000023.1 Genbank gene 489 1103 . + . ID=gene-NND05_11150;Name=NND05_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11150 JANDXE010000023.1 Protein Homology CDS 489 1103 . + 0 ID=cds-MCP9538089.1;Parent=gene-NND05_11150;Dbxref=NCBI_GP:MCP9538089.1;Name=MCP9538089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846604.1;locus_tag=NND05_11150;product=DNA-binding protein;protein_id=MCP9538089.1;transl_table=11 JANDXE010000023.1 Genbank gene 1154 1246 . + . ID=gene-NND05_11155;Name=NND05_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11155 JANDXE010000023.1 Protein Homology CDS 1154 1246 . + 0 ID=cds-MCP9538090.1;Parent=gene-NND05_11155;Dbxref=NCBI_GP:MCP9538090.1;Name=MCP9538090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015310466.1;locus_tag=NND05_11155;product=smalltalk protein;protein_id=MCP9538090.1;transl_table=11 JANDXE010000023.1 Genbank gene 1541 2053 . + . ID=gene-NND05_11160;Name=NND05_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11160 JANDXE010000023.1 GeneMarkS-2+ CDS 1541 2053 . + 0 ID=cds-MCP9538091.1;Parent=gene-NND05_11160;Dbxref=NCBI_GP:MCP9538091.1;Name=MCP9538091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11160;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=MCP9538091.1;transl_table=11 JANDXE010000023.1 Genbank gene 2098 3210 . + . ID=gene-NND05_11165;Name=NND05_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11165 JANDXE010000023.1 Protein Homology CDS 2098 3210 . + 0 ID=cds-MCP9538092.1;Parent=gene-NND05_11165;Dbxref=NCBI_GP:MCP9538092.1;Name=MCP9538092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036995.2;locus_tag=NND05_11165;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9538092.1;transl_table=11 JANDXE010000023.1 Genbank gene 3230 5161 . + . ID=gene-NND05_11170;Name=NND05_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11170 JANDXE010000023.1 Protein Homology CDS 3230 5161 . + 0 ID=cds-MCP9538093.1;Parent=gene-NND05_11170;Dbxref=NCBI_GP:MCP9538093.1;Name=MCP9538093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=NND05_11170;product=DUF262 domain-containing HNH endonuclease family protein;protein_id=MCP9538093.1;transl_table=11 JANDXE010000023.1 Genbank gene 5305 5799 . + . ID=gene-NND05_11175;Name=NND05_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11175 JANDXE010000023.1 GeneMarkS-2+ CDS 5305 5799 . + 0 ID=cds-MCP9538094.1;Parent=gene-NND05_11175;Dbxref=NCBI_GP:MCP9538094.1;Name=MCP9538094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11175;product=hypothetical protein;protein_id=MCP9538094.1;transl_table=11 JANDXE010000023.1 Genbank gene 5735 6013 . + . ID=gene-NND05_11180;Name=NND05_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11180 JANDXE010000023.1 GeneMarkS-2+ CDS 5735 6013 . + 0 ID=cds-MCP9538095.1;Parent=gene-NND05_11180;Dbxref=NCBI_GP:MCP9538095.1;Name=MCP9538095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11180;product=hypothetical protein;protein_id=MCP9538095.1;transl_table=11 JANDXE010000023.1 Genbank gene 6026 6199 . + . ID=gene-NND05_11185;Name=NND05_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11185 JANDXE010000023.1 GeneMarkS-2+ CDS 6026 6199 . + 0 ID=cds-MCP9538096.1;Parent=gene-NND05_11185;Dbxref=NCBI_GP:MCP9538096.1;Name=MCP9538096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11185;product=hypothetical protein;protein_id=MCP9538096.1;transl_table=11 JANDXE010000023.1 Genbank gene 6124 6768 . + . ID=gene-NND05_11190;Name=NND05_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11190 JANDXE010000023.1 Protein Homology CDS 6124 6768 . + 0 ID=cds-MCP9538097.1;Parent=gene-NND05_11190;Dbxref=NCBI_GP:MCP9538097.1;Name=MCP9538097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027879.2;locus_tag=NND05_11190;product=BREX system Lon protease-like protein BrxL;protein_id=MCP9538097.1;transl_table=11 JANDXE010000023.1 Genbank gene 6865 8898 . - . ID=gene-NND05_11195;Name=NND05_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11195 JANDXE010000023.1 Protein Homology CDS 6865 8898 . - 0 ID=cds-MCP9538098.1;Parent=gene-NND05_11195;Dbxref=NCBI_GP:MCP9538098.1;Name=MCP9538098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345869.1;locus_tag=NND05_11195;product=M13 family metallopeptidase;protein_id=MCP9538098.1;transl_table=11 JANDXE010000023.1 Genbank gene 8925 10895 . - . ID=gene-NND05_11200;Name=NND05_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11200 JANDXE010000023.1 Protein Homology CDS 8925 10895 . - 0 ID=cds-MCP9538099.1;Parent=gene-NND05_11200;Dbxref=NCBI_GP:MCP9538099.1;Name=MCP9538099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362711.1;locus_tag=NND05_11200;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCP9538099.1;transl_table=11 JANDXE010000023.1 Genbank gene 11051 12325 . - . ID=gene-NND05_11205;Name=NND05_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11205 JANDXE010000023.1 Protein Homology CDS 11051 12325 . - 0 ID=cds-MCP9538100.1;Parent=gene-NND05_11205;Dbxref=NCBI_GP:MCP9538100.1;Name=MCP9538100.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376003.1;locus_tag=NND05_11205;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=MCP9538100.1;transl_table=11 JANDXE010000023.1 Genbank gene 12401 13105 . - . ID=gene-NND05_11210;Name=NND05_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11210 JANDXE010000023.1 Protein Homology CDS 12401 13105 . - 0 ID=cds-MCP9538101.1;Parent=gene-NND05_11210;Dbxref=NCBI_GP:MCP9538101.1;Name=MCP9538101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282407.1;locus_tag=NND05_11210;product=phosphatase PAP2 family protein;protein_id=MCP9538101.1;transl_table=11 JANDXE010000023.1 Genbank gene 13179 15776 . - . ID=gene-NND05_11215;Name=NND05_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11215 JANDXE010000023.1 Protein Homology CDS 13179 15776 . - 0 ID=cds-MCP9538102.1;Parent=gene-NND05_11215;Dbxref=NCBI_GP:MCP9538102.1;Name=MCP9538102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967769.1;locus_tag=NND05_11215;product=BatD family protein;protein_id=MCP9538102.1;transl_table=11 JANDXE010000023.1 Genbank gene 15839 16588 . - . ID=gene-NND05_11220;Name=NND05_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11220 JANDXE010000023.1 Protein Homology CDS 15839 16588 . - 0 ID=cds-MCP9538103.1;Parent=gene-NND05_11220;Dbxref=NCBI_GP:MCP9538103.1;Name=MCP9538103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846682.1;locus_tag=NND05_11220;product=tetratricopeptide repeat protein;protein_id=MCP9538103.1;transl_table=11 JANDXE010000023.1 Genbank gene 16763 17803 . - . ID=gene-NND05_11225;Name=NND05_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11225 JANDXE010000023.1 Protein Homology CDS 16763 17803 . - 0 ID=cds-MCP9538104.1;Parent=gene-NND05_11225;Dbxref=NCBI_GP:MCP9538104.1;Name=MCP9538104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846683.1;locus_tag=NND05_11225;product=VWA domain-containing protein;protein_id=MCP9538104.1;transl_table=11 JANDXE010000023.1 Genbank gene 17848 18846 . - . ID=gene-NND05_11230;Name=NND05_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11230 JANDXE010000023.1 Protein Homology CDS 17848 18846 . - 0 ID=cds-MCP9538105.1;Parent=gene-NND05_11230;Dbxref=NCBI_GP:MCP9538105.1;Name=MCP9538105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133622.1;locus_tag=NND05_11230;product=VWA domain-containing protein;protein_id=MCP9538105.1;transl_table=11 JANDXE010000023.1 Genbank gene 18906 19982 . - . ID=gene-NND05_11235;Name=NND05_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11235 JANDXE010000023.1 Protein Homology CDS 18906 19982 . - 0 ID=cds-MCP9538106.1;Parent=gene-NND05_11235;Dbxref=NCBI_GP:MCP9538106.1;Name=MCP9538106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282413.1;locus_tag=NND05_11235;product=BatD family protein;protein_id=MCP9538106.1;transl_table=11 JANDXE010000023.1 Genbank gene 19994 20863 . - . ID=gene-NND05_11240;Name=NND05_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11240 JANDXE010000023.1 Protein Homology CDS 19994 20863 . - 0 ID=cds-MCP9538107.1;Parent=gene-NND05_11240;Dbxref=NCBI_GP:MCP9538107.1;Name=MCP9538107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412395.1;locus_tag=NND05_11240;product=DUF58 domain-containing protein;protein_id=MCP9538107.1;transl_table=11 JANDXE010000023.1 Genbank gene 20892 21887 . - . ID=gene-NND05_11245;Name=NND05_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11245 JANDXE010000023.1 Protein Homology CDS 20892 21887 . - 0 ID=cds-MCP9538108.1;Parent=gene-NND05_11245;Dbxref=NCBI_GP:MCP9538108.1;Name=MCP9538108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008563646.1;locus_tag=NND05_11245;product=MoxR family ATPase;protein_id=MCP9538108.1;transl_table=11 JANDXE010000023.1 Genbank gene 22085 23305 . - . ID=gene-NND05_11250;Name=NND05_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11250 JANDXE010000023.1 Protein Homology CDS 22085 23305 . - 0 ID=cds-MCP9538109.1;Parent=gene-NND05_11250;Dbxref=NCBI_GP:MCP9538109.1;Name=MCP9538109.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846688.1;locus_tag=NND05_11250;product=MFS transporter;protein_id=MCP9538109.1;transl_table=11 JANDXE010000023.1 Genbank gene 23307 24125 . - . ID=gene-NND05_11255;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NND05_11255 JANDXE010000023.1 Protein Homology CDS 23307 24125 . - 0 ID=cds-MCP9538110.1;Parent=gene-NND05_11255;Dbxref=NCBI_GP:MCP9538110.1;Name=MCP9538110.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378504.1;locus_tag=NND05_11255;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=MCP9538110.1;transl_table=11 JANDXE010000023.1 Genbank gene 24136 24819 . - . ID=gene-NND05_11260;Name=NND05_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11260 JANDXE010000023.1 Protein Homology CDS 24136 24819 . - 0 ID=cds-MCP9538111.1;Parent=gene-NND05_11260;Dbxref=NCBI_GP:MCP9538111.1;Name=MCP9538111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846690.1;locus_tag=NND05_11260;product=HAD family phosphatase;protein_id=MCP9538111.1;transl_table=11 JANDXE010000023.1 Genbank gene 25290 25913 . + . ID=gene-NND05_11265;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=NND05_11265 JANDXE010000023.1 Protein Homology CDS 25290 25913 . + 0 ID=cds-MCP9538112.1;Parent=gene-NND05_11265;Dbxref=NCBI_GP:MCP9538112.1;Name=MCP9538112.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018361682.1;locus_tag=NND05_11265;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=MCP9538112.1;transl_table=11 JANDXE010000023.1 Genbank gene 25932 26576 . + . ID=gene-NND05_11270;Name=NND05_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11270 JANDXE010000023.1 Protein Homology CDS 25932 26576 . + 0 ID=cds-MCP9538113.1;Parent=gene-NND05_11270;Dbxref=NCBI_GP:MCP9538113.1;Name=MCP9538113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006046001.1;locus_tag=NND05_11270;product=MBL fold metallo-hydrolase;protein_id=MCP9538113.1;transl_table=11 JANDXE010000023.1 Genbank gene 26632 27273 . + . ID=gene-NND05_11275;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=NND05_11275 JANDXE010000023.1 Protein Homology CDS 26632 27273 . + 0 ID=cds-MCP9538114.1;Parent=gene-NND05_11275;Dbxref=NCBI_GP:MCP9538114.1;Name=MCP9538114.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009348508.1;locus_tag=NND05_11275;product=crossover junction endodeoxyribonuclease RuvC;protein_id=MCP9538114.1;transl_table=11 JANDXE010000023.1 Genbank gene 27329 28816 . + . ID=gene-NND05_11280;Name=NND05_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11280 JANDXE010000023.1 Protein Homology CDS 27329 28816 . + 0 ID=cds-MCP9538115.1;Parent=gene-NND05_11280;Dbxref=NCBI_GP:MCP9538115.1;Name=MCP9538115.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345816.1;locus_tag=NND05_11280;product=ATP-binding cassette domain-containing protein;protein_id=MCP9538115.1;transl_table=11 JANDXE010000023.1 Genbank gene 28827 30005 . + . ID=gene-NND05_11285;Name=NND05_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11285 JANDXE010000023.1 Protein Homology CDS 28827 30005 . + 0 ID=cds-MCP9538116.1;Parent=gene-NND05_11285;Dbxref=NCBI_GP:MCP9538116.1;Name=MCP9538116.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_11285;product=helix-turn-helix domain-containing protein;protein_id=MCP9538116.1;transl_table=11 JANDXE010000023.1 Genbank gene 30461 31678 . + . ID=gene-NND05_11290;Name=NND05_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11290 JANDXE010000023.1 Protein Homology CDS 30461 31678 . + 0 ID=cds-MCP9538117.1;Parent=gene-NND05_11290;Dbxref=NCBI_GP:MCP9538117.1;Name=MCP9538117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=NND05_11290;product=OmpA family protein;protein_id=MCP9538117.1;transl_table=11 JANDXE010000023.1 Genbank gene 31699 32592 . + . ID=gene-NND05_11295;Name=NND05_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11295 JANDXE010000023.1 Protein Homology CDS 31699 32592 . + 0 ID=cds-MCP9538118.1;Parent=gene-NND05_11295;Dbxref=NCBI_GP:MCP9538118.1;Name=MCP9538118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900926.1;locus_tag=NND05_11295;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9538118.1;transl_table=11 JANDXE010000023.1 Genbank gene 32630 33514 . + . ID=gene-NND05_11300;Name=NND05_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11300 JANDXE010000023.1 Protein Homology CDS 32630 33514 . + 0 ID=cds-MCP9538119.1;Parent=gene-NND05_11300;Dbxref=NCBI_GP:MCP9538119.1;Name=MCP9538119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_11300;product=fimbrillin family protein;protein_id=MCP9538119.1;transl_table=11 JANDXE010000023.1 Genbank gene 33537 34517 . + . ID=gene-NND05_11305;Name=NND05_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11305 JANDXE010000023.1 Protein Homology CDS 33537 34517 . + 0 ID=cds-MCP9538120.1;Parent=gene-NND05_11305;Dbxref=NCBI_GP:MCP9538120.1;Name=MCP9538120.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_11305;product=fimbrillin family protein;protein_id=MCP9538120.1;transl_table=11 JANDXE010000023.1 Genbank gene 34597 35493 . + . ID=gene-NND05_11310;Name=NND05_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11310 JANDXE010000023.1 Protein Homology CDS 34597 35493 . + 0 ID=cds-MCP9538121.1;Parent=gene-NND05_11310;Dbxref=NCBI_GP:MCP9538121.1;Name=MCP9538121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_11310;product=fimbrillin family protein;protein_id=MCP9538121.1;transl_table=11 JANDXE010000023.1 Genbank gene 35508 36812 . + . ID=gene-NND05_11315;Name=NND05_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11315 JANDXE010000023.1 GeneMarkS-2+ CDS 35508 36812 . + 0 ID=cds-MCP9538122.1;Parent=gene-NND05_11315;Dbxref=NCBI_GP:MCP9538122.1;Name=MCP9538122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11315;product=leucine-rich repeat domain-containing protein;protein_id=MCP9538122.1;transl_table=11 JANDXE010000023.1 Genbank gene 37191 38093 . + . ID=gene-NND05_11320;Name=NND05_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11320 JANDXE010000023.1 Protein Homology CDS 37191 38093 . + 0 ID=cds-MCP9538123.1;Parent=gene-NND05_11320;Dbxref=NCBI_GP:MCP9538123.1;Name=MCP9538123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849536.1;locus_tag=NND05_11320;product=Abi family protein;protein_id=MCP9538123.1;transl_table=11 JANDXE010000023.1 Genbank gene 38084 38599 . + . ID=gene-NND05_11325;Name=NND05_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11325 JANDXE010000023.1 Protein Homology CDS 38084 38599 . + 0 ID=cds-MCP9538124.1;Parent=gene-NND05_11325;Dbxref=NCBI_GP:MCP9538124.1;Name=MCP9538124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=NND05_11325;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538124.1;transl_table=11 JANDXE010000023.1 Genbank gene 38742 39638 . - . ID=gene-NND05_11330;Name=NND05_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11330 JANDXE010000023.1 Protein Homology CDS 38742 39638 . - 0 ID=cds-MCP9538125.1;Parent=gene-NND05_11330;Dbxref=NCBI_GP:MCP9538125.1;Name=MCP9538125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618388.1;locus_tag=NND05_11330;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538125.1;transl_table=11 JANDXE010000023.1 Genbank gene 39864 40094 . - . ID=gene-NND05_11335;Name=NND05_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11335 JANDXE010000023.1 GeneMarkS-2+ CDS 39864 40094 . - 0 ID=cds-MCP9538126.1;Parent=gene-NND05_11335;Dbxref=NCBI_GP:MCP9538126.1;Name=MCP9538126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11335;product=hypothetical protein;protein_id=MCP9538126.1;transl_table=11 JANDXE010000023.1 Genbank gene 40129 40233 . - . ID=gene-NND05_11340;Name=NND05_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11340 JANDXE010000023.1 Protein Homology CDS 40129 40233 . - 0 ID=cds-MCP9538127.1;Parent=gene-NND05_11340;Dbxref=NCBI_GP:MCP9538127.1;Name=MCP9538127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_11340;product=smalltalk protein;protein_id=MCP9538127.1;transl_table=11 JANDXE010000023.1 Genbank gene 40306 40521 . - . ID=gene-NND05_11345;Name=NND05_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11345 JANDXE010000023.1 GeneMarkS-2+ CDS 40306 40521 . - 0 ID=cds-MCP9538128.1;Parent=gene-NND05_11345;Dbxref=NCBI_GP:MCP9538128.1;Name=MCP9538128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11345;product=hypothetical protein;protein_id=MCP9538128.1;transl_table=11 JANDXE010000023.1 Genbank gene 41339 42292 . + . ID=gene-NND05_11350;Name=NND05_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11350 JANDXE010000023.1 Protein Homology CDS 41339 42292 . + 0 ID=cds-MCP9538129.1;Parent=gene-NND05_11350;Dbxref=NCBI_GP:MCP9538129.1;Name=MCP9538129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799945.1;locus_tag=NND05_11350;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538129.1;transl_table=11 JANDXE010000023.1 Genbank gene 42369 44033 . - . ID=gene-NND05_11355;Name=NND05_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11355 JANDXE010000023.1 Protein Homology CDS 42369 44033 . - 0 ID=cds-MCP9538130.1;Parent=gene-NND05_11355;Dbxref=NCBI_GP:MCP9538130.1;Name=MCP9538130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370278.1;locus_tag=NND05_11355;product=C69 family dipeptidase;protein_id=MCP9538130.1;transl_table=11 JANDXE010000023.1 Genbank gene 44054 44905 . - . ID=gene-NND05_11360;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=NND05_11360 JANDXE010000023.1 Protein Homology CDS 44054 44905 . - 0 ID=cds-MCP9538131.1;Parent=gene-NND05_11360;Dbxref=NCBI_GP:MCP9538131.1;Name=MCP9538131.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899553.1;locus_tag=NND05_11360;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=MCP9538131.1;transl_table=11 JANDXE010000023.1 Genbank gene 44973 45194 . - . ID=gene-NND05_11365;Name=NND05_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11365 JANDXE010000023.1 GeneMarkS-2+ CDS 44973 45194 . - 0 ID=cds-MCP9538132.1;Parent=gene-NND05_11365;Dbxref=NCBI_GP:MCP9538132.1;Name=MCP9538132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11365;product=hypothetical protein;protein_id=MCP9538132.1;transl_table=11 JANDXE010000023.1 Genbank gene 45197 46123 . - . ID=gene-NND05_11370;Name=NND05_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11370 JANDXE010000023.1 Protein Homology CDS 45197 46123 . - 0 ID=cds-MCP9538133.1;Parent=gene-NND05_11370;Dbxref=NCBI_GP:MCP9538133.1;Name=MCP9538133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372615.1;locus_tag=NND05_11370;product=DUF4296 domain-containing protein;protein_id=MCP9538133.1;transl_table=11 JANDXE010000023.1 Genbank gene 46139 46822 . - . ID=gene-NND05_11375;Name=NND05_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11375 JANDXE010000023.1 Protein Homology CDS 46139 46822 . - 0 ID=cds-MCP9538134.1;Parent=gene-NND05_11375;Dbxref=NCBI_GP:MCP9538134.1;Name=MCP9538134.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341863.1;locus_tag=NND05_11375;product=lipoprotein signal peptidase;protein_id=MCP9538134.1;transl_table=11 JANDXE010000023.1 Genbank gene 46826 47209 . - . ID=gene-NND05_11380;Name=NND05_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11380 JANDXE010000023.1 Protein Homology CDS 46826 47209 . - 0 ID=cds-MCP9538135.1;Parent=gene-NND05_11380;Dbxref=NCBI_GP:MCP9538135.1;Name=MCP9538135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846836.1;locus_tag=NND05_11380;product=TraR/DksA family transcriptional regulator;protein_id=MCP9538135.1;transl_table=11 JANDXE010000023.1 Genbank gene 47320 50931 . - . ID=gene-NND05_11385;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NND05_11385 JANDXE010000023.1 Protein Homology CDS 47320 50931 . - 0 ID=cds-MCP9538136.1;Parent=gene-NND05_11385;Dbxref=NCBI_GP:MCP9538136.1;Name=MCP9538136.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372612.1;locus_tag=NND05_11385;product=isoleucine--tRNA ligase;protein_id=MCP9538136.1;transl_table=11 JANDXE010000023.1 Genbank gene 51156 55076 . - . ID=gene-NND05_11390;Name=NND05_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11390 JANDXE010000023.1 Protein Homology CDS 51156 55076 . - 0 ID=cds-MCP9538137.1;Parent=gene-NND05_11390;Dbxref=NCBI_GP:MCP9538137.1;Name=MCP9538137.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012356.2;locus_tag=NND05_11390;product=alpha-amylase family glycosyl hydrolase;protein_id=MCP9538137.1;transl_table=11 JANDXE010000023.1 Genbank gene 55399 57393 . - . ID=gene-NND05_11395;Name=NND05_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11395 JANDXE010000023.1 Protein Homology CDS 55399 57393 . - 0 ID=cds-MCP9538138.1;Parent=gene-NND05_11395;Dbxref=NCBI_GP:MCP9538138.1;Name=MCP9538138.1;Ontology_term=GO:0006807,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=nitrogen compound metabolic process|0006807||IEA,NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376007.1;locus_tag=NND05_11395;product=NAD(+) synthase;protein_id=MCP9538138.1;transl_table=11 JANDXE010000023.1 Genbank gene 57440 58582 . - . ID=gene-NND05_11400;Name=NND05_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11400 JANDXE010000023.1 Protein Homology CDS 57440 58582 . - 0 ID=cds-MCP9538139.1;Parent=gene-NND05_11400;Dbxref=NCBI_GP:MCP9538139.1;Name=MCP9538139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920808.1;locus_tag=NND05_11400;product=DUF2027 domain-containing protein;protein_id=MCP9538139.1;transl_table=11 JANDXE010000023.1 Genbank gene 58859 59719 . + . ID=gene-NND05_11405;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=NND05_11405 JANDXE010000023.1 Protein Homology CDS 58859 59719 . + 0 ID=cds-MCP9538140.1;Parent=gene-NND05_11405;Dbxref=NCBI_GP:MCP9538140.1;Name=MCP9538140.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004347047.1;locus_tag=NND05_11405;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=MCP9538140.1;transl_table=11 JANDXE010000023.1 Genbank gene 59876 60490 . + . ID=gene-NND05_11410;Name=NND05_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11410 JANDXE010000023.1 Protein Homology CDS 59876 60490 . + 0 ID=cds-MCP9538141.1;Parent=gene-NND05_11410;Dbxref=NCBI_GP:MCP9538141.1;Name=MCP9538141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846842.1;locus_tag=NND05_11410;product=DNA alkylation repair protein;protein_id=MCP9538141.1;transl_table=11 JANDXE010000023.1 Genbank gene 60904 61404 . - . ID=gene-NND05_11415;Name=NND05_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11415 JANDXE010000023.1 Protein Homology CDS 60904 61404 . - 0 ID=cds-MCP9538142.1;Parent=gene-NND05_11415;Dbxref=NCBI_GP:MCP9538142.1;Name=MCP9538142.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846843.1;locus_tag=NND05_11415;product=NUDIX domain-containing protein;protein_id=MCP9538142.1;transl_table=11 JANDXE010000023.1 Genbank gene 61712 63787 . - . ID=gene-NND05_11420;Name=NND05_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11420 JANDXE010000023.1 Protein Homology CDS 61712 63787 . - 0 ID=cds-MCP9538143.1;Parent=gene-NND05_11420;Dbxref=NCBI_GP:MCP9538143.1;Name=MCP9538143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846844.1;locus_tag=NND05_11420;product=dipeptidyl peptidase 3;protein_id=MCP9538143.1;transl_table=11 JANDXE010000023.1 Genbank gene 63953 65863 . + . ID=gene-NND05_11425;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NND05_11425 JANDXE010000023.1 Protein Homology CDS 63953 65863 . + 0 ID=cds-MCP9538144.1;Parent=gene-NND05_11425;Dbxref=NCBI_GP:MCP9538144.1;Name=MCP9538144.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846846.1;locus_tag=NND05_11425;product=DNA helicase RecQ;protein_id=MCP9538144.1;transl_table=11 ##sequence-region JANDXE010000024.1 1 57858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000024.1 Genbank region 1 57858 . + . ID=JANDXE010000024.1:1..57858;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000024.1 Genbank gene 795 1622 . + . ID=gene-NND05_11430;Name=NND05_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11430 JANDXE010000024.1 Protein Homology CDS 795 1622 . + 0 ID=cds-MCP9538145.1;Parent=gene-NND05_11430;Dbxref=NCBI_GP:MCP9538145.1;Name=MCP9538145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847816.1;locus_tag=NND05_11430;product=alpha/beta hydrolase;protein_id=MCP9538145.1;transl_table=11 JANDXE010000024.1 Genbank pseudogene 2388 2671 . + . ID=gene-NND05_11435;Name=NND05_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_11435;pseudo=true JANDXE010000024.1 Protein Homology CDS 2388 2671 . + 0 ID=cds-NND05_11435;Parent=gene-NND05_11435;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008764671.1;locus_tag=NND05_11435;product=DUF1016 domain-containing protein;pseudo=true;transl_table=11 JANDXE010000024.1 Genbank gene 3067 4350 . + . ID=gene-NND05_11440;Name=NND05_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11440 JANDXE010000024.1 GeneMarkS-2+ CDS 3067 4350 . + 0 ID=cds-MCP9538146.1;Parent=gene-NND05_11440;Dbxref=NCBI_GP:MCP9538146.1;Name=MCP9538146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11440;product=hypothetical protein;protein_id=MCP9538146.1;transl_table=11 JANDXE010000024.1 Genbank gene 4347 4901 . + . ID=gene-NND05_11445;Name=NND05_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11445 JANDXE010000024.1 GeneMarkS-2+ CDS 4347 4901 . + 0 ID=cds-MCP9538147.1;Parent=gene-NND05_11445;Dbxref=NCBI_GP:MCP9538147.1;Name=MCP9538147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11445;product=hypothetical protein;protein_id=MCP9538147.1;transl_table=11 JANDXE010000024.1 Genbank gene 5557 6753 . + . ID=gene-NND05_11450;Name=NND05_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11450 JANDXE010000024.1 Protein Homology CDS 5557 6753 . + 0 ID=cds-MCP9538148.1;Parent=gene-NND05_11450;Dbxref=NCBI_GP:MCP9538148.1;Name=MCP9538148.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848883.1;locus_tag=NND05_11450;product=phage antirepressor KilAC domain-containing protein;protein_id=MCP9538148.1;transl_table=11 JANDXE010000024.1 Genbank gene 6771 9572 . + . ID=gene-NND05_11455;Name=NND05_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11455 JANDXE010000024.1 Protein Homology CDS 6771 9572 . + 0 ID=cds-MCP9538149.1;Parent=gene-NND05_11455;Dbxref=NCBI_GP:MCP9538149.1;Name=MCP9538149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847311.1;locus_tag=NND05_11455;product=hypothetical protein;protein_id=MCP9538149.1;transl_table=11 JANDXE010000024.1 Genbank gene 9604 10164 . + . ID=gene-NND05_11460;Name=NND05_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11460 JANDXE010000024.1 Protein Homology CDS 9604 10164 . + 0 ID=cds-MCP9538150.1;Parent=gene-NND05_11460;Dbxref=NCBI_GP:MCP9538150.1;Name=MCP9538150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848882.1;locus_tag=NND05_11460;product=DUF5675 family protein;protein_id=MCP9538150.1;transl_table=11 JANDXE010000024.1 Genbank gene 11059 11520 . + . ID=gene-NND05_11465;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=NND05_11465 JANDXE010000024.1 Protein Homology CDS 11059 11520 . + 0 ID=cds-MCP9538151.1;Parent=gene-NND05_11465;Dbxref=NCBI_GP:MCP9538151.1;Name=MCP9538151.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367588.1;locus_tag=NND05_11465;product=50S ribosomal protein L13;protein_id=MCP9538151.1;transl_table=11 JANDXE010000024.1 Genbank gene 11531 11917 . + . ID=gene-NND05_11470;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NND05_11470 JANDXE010000024.1 Protein Homology CDS 11531 11917 . + 0 ID=cds-MCP9538152.1;Parent=gene-NND05_11470;Dbxref=NCBI_GP:MCP9538152.1;Name=MCP9538152.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708903.1;locus_tag=NND05_11470;product=30S ribosomal protein S9;protein_id=MCP9538152.1;transl_table=11 JANDXE010000024.1 Genbank gene 12075 12845 . + . ID=gene-NND05_11475;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=NND05_11475 JANDXE010000024.1 Protein Homology CDS 12075 12845 . + 0 ID=cds-MCP9538153.1;Parent=gene-NND05_11475;Dbxref=NCBI_GP:MCP9538153.1;Name=MCP9538153.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848005.1;locus_tag=NND05_11475;product=30S ribosomal protein S2;protein_id=MCP9538153.1;transl_table=11 JANDXE010000024.1 Genbank gene 12954 13949 . + . ID=gene-NND05_11480;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=NND05_11480 JANDXE010000024.1 Protein Homology CDS 12954 13949 . + 0 ID=cds-MCP9538154.1;Parent=gene-NND05_11480;Dbxref=NCBI_GP:MCP9538154.1;Name=MCP9538154.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010992.1;locus_tag=NND05_11480;product=translation elongation factor Ts;protein_id=MCP9538154.1;transl_table=11 JANDXE010000024.1 Genbank gene 14072 14689 . + . ID=gene-NND05_11485;Name=NND05_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11485 JANDXE010000024.1 Protein Homology CDS 14072 14689 . + 0 ID=cds-MCP9538155.1;Parent=gene-NND05_11485;Dbxref=NCBI_GP:MCP9538155.1;Name=MCP9538155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708900.1;locus_tag=NND05_11485;product=fumarylacetoacetate hydrolase family protein;protein_id=MCP9538155.1;transl_table=11 JANDXE010000024.1 Genbank gene 14699 18313 . + . ID=gene-NND05_11490;Name=porU;gbkey=Gene;gene=porU;gene_biotype=protein_coding;locus_tag=NND05_11490 JANDXE010000024.1 Protein Homology CDS 14699 18313 . + 0 ID=cds-MCP9538156.1;Parent=gene-NND05_11490;Dbxref=NCBI_GP:MCP9538156.1;Name=MCP9538156.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;gene=porU;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848002.1;locus_tag=NND05_11490;product=type IX secretion system sortase PorU;protein_id=MCP9538156.1;transl_table=11 JANDXE010000024.1 Genbank gene 18342 19532 . + . ID=gene-NND05_11495;Name=porV;gbkey=Gene;gene=porV;gene_biotype=protein_coding;locus_tag=NND05_11495 JANDXE010000024.1 Protein Homology CDS 18342 19532 . + 0 ID=cds-MCP9538157.1;Parent=gene-NND05_11495;Dbxref=NCBI_GP:MCP9538157.1;Name=MCP9538157.1;gbkey=CDS;gene=porV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283576.1;locus_tag=NND05_11495;product=type IX secretion system outer membrane channel protein PorV;protein_id=MCP9538157.1;transl_table=11 JANDXE010000024.1 Genbank gene 19589 20068 . + . ID=gene-NND05_11500;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=NND05_11500 JANDXE010000024.1 Protein Homology CDS 19589 20068 . + 0 ID=cds-MCP9538158.1;Parent=gene-NND05_11500;Dbxref=NCBI_GP:MCP9538158.1;Name=MCP9538158.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009231428.1;locus_tag=NND05_11500;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=MCP9538158.1;transl_table=11 JANDXE010000024.1 Genbank gene 20495 21769 . + . ID=gene-NND05_11505;Name=NND05_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11505 JANDXE010000024.1 Protein Homology CDS 20495 21769 . + 0 ID=cds-MCP9538159.1;Parent=gene-NND05_11505;Dbxref=NCBI_GP:MCP9538159.1;Name=MCP9538159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920990.1;locus_tag=NND05_11505;product=glycosyltransferase family 4 protein;protein_id=MCP9538159.1;transl_table=11 JANDXE010000024.1 Genbank gene 21766 22542 . + . ID=gene-NND05_11510;Name=NND05_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11510 JANDXE010000024.1 Protein Homology CDS 21766 22542 . + 0 ID=cds-MCP9538160.1;Parent=gene-NND05_11510;Dbxref=NCBI_GP:MCP9538160.1;Name=MCP9538160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341123.1;locus_tag=NND05_11510;product=glycosyltransferase;protein_id=MCP9538160.1;transl_table=11 JANDXE010000024.1 Genbank gene 22577 24022 . + . ID=gene-NND05_11515;Name=NND05_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11515 JANDXE010000024.1 Protein Homology CDS 22577 24022 . + 0 ID=cds-MCP9538161.1;Parent=gene-NND05_11515;Dbxref=NCBI_GP:MCP9538161.1;Name=MCP9538161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368760.1;locus_tag=NND05_11515;product=lipopolysaccharide biosynthesis protein;protein_id=MCP9538161.1;transl_table=11 JANDXE010000024.1 Genbank gene 24059 25018 . + . ID=gene-NND05_11520;Name=NND05_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11520 JANDXE010000024.1 Protein Homology CDS 24059 25018 . + 0 ID=cds-MCP9538162.1;Parent=gene-NND05_11520;Dbxref=NCBI_GP:MCP9538162.1;Name=MCP9538162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352560.1;locus_tag=NND05_11520;product=glycosyltransferase;protein_id=MCP9538162.1;transl_table=11 JANDXE010000024.1 Genbank gene 25031 25750 . + . ID=gene-NND05_11525;Name=NND05_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11525 JANDXE010000024.1 Protein Homology CDS 25031 25750 . + 0 ID=cds-MCP9538163.1;Parent=gene-NND05_11525;Dbxref=NCBI_GP:MCP9538163.1;Name=MCP9538163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352549.1;locus_tag=NND05_11525;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MCP9538163.1;transl_table=11 JANDXE010000024.1 Genbank gene 25811 26839 . + . ID=gene-NND05_11530;Name=NND05_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11530 JANDXE010000024.1 Protein Homology CDS 25811 26839 . + 0 ID=cds-MCP9538164.1;Parent=gene-NND05_11530;Dbxref=NCBI_GP:MCP9538164.1;Name=MCP9538164.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573421.1;locus_tag=NND05_11530;product=NAD-dependent epimerase/dehydratase family protein;protein_id=MCP9538164.1;transl_table=11 JANDXE010000024.1 Genbank gene 27201 28016 . - . ID=gene-NND05_11535;Name=NND05_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11535 JANDXE010000024.1 Protein Homology CDS 27201 28016 . - 0 ID=cds-MCP9538165.1;Parent=gene-NND05_11535;Dbxref=NCBI_GP:MCP9538165.1;Name=MCP9538165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281304.1;locus_tag=NND05_11535;product=LicD family protein;protein_id=MCP9538165.1;transl_table=11 JANDXE010000024.1 Genbank gene 28064 29401 . - . ID=gene-NND05_11540;Name=NND05_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11540 JANDXE010000024.1 Protein Homology CDS 28064 29401 . - 0 ID=cds-MCP9538166.1;Parent=gene-NND05_11540;Dbxref=NCBI_GP:MCP9538166.1;Name=MCP9538166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039342.1;locus_tag=NND05_11540;product=DUF6080 domain-containing protein;protein_id=MCP9538166.1;transl_table=11 JANDXE010000024.1 Genbank gene 29597 30622 . + . ID=gene-NND05_11545;Name=NND05_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11545 JANDXE010000024.1 Protein Homology CDS 29597 30622 . + 0 ID=cds-MCP9538167.1;Parent=gene-NND05_11545;Dbxref=NCBI_GP:MCP9538167.1;Name=MCP9538167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065221.1;locus_tag=NND05_11545;product=hemolysin activation protein;protein_id=MCP9538167.1;transl_table=11 JANDXE010000024.1 Genbank gene 30630 32138 . - . ID=gene-NND05_11550;Name=NND05_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11550 JANDXE010000024.1 Protein Homology CDS 30630 32138 . - 0 ID=cds-MCP9538168.1;Parent=gene-NND05_11550;Dbxref=NCBI_GP:MCP9538168.1;Name=MCP9538168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847982.1;locus_tag=NND05_11550;product=DUF6080 domain-containing protein;protein_id=MCP9538168.1;transl_table=11 JANDXE010000024.1 Genbank gene 32230 32667 . - . ID=gene-NND05_11555;Name=NND05_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11555 JANDXE010000024.1 Protein Homology CDS 32230 32667 . - 0 ID=cds-MCP9538169.1;Parent=gene-NND05_11555;Dbxref=NCBI_GP:MCP9538169.1;Name=MCP9538169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847981.1;locus_tag=NND05_11555;product=GtrA family protein;protein_id=MCP9538169.1;transl_table=11 JANDXE010000024.1 Genbank gene 32754 33731 . - . ID=gene-NND05_11560;Name=NND05_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11560 JANDXE010000024.1 Protein Homology CDS 32754 33731 . - 0 ID=cds-MCP9538170.1;Parent=gene-NND05_11560;Dbxref=NCBI_GP:MCP9538170.1;Name=MCP9538170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=NND05_11560;product=acyltransferase;protein_id=MCP9538170.1;transl_table=11 JANDXE010000024.1 Genbank gene 33758 34399 . - . ID=gene-NND05_11565;Name=NND05_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11565 JANDXE010000024.1 Protein Homology CDS 33758 34399 . - 0 ID=cds-MCP9538171.1;Parent=gene-NND05_11565;Dbxref=NCBI_GP:MCP9538171.1;Name=MCP9538171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004382795.1;locus_tag=NND05_11565;product=haloacid dehalogenase-like hydrolase;protein_id=MCP9538171.1;transl_table=11 JANDXE010000024.1 Genbank gene 34430 35335 . - . ID=gene-NND05_11570;Name=NND05_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11570 JANDXE010000024.1 Protein Homology CDS 34430 35335 . - 0 ID=cds-MCP9538172.1;Parent=gene-NND05_11570;Dbxref=NCBI_GP:MCP9538172.1;Name=MCP9538172.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847978.1;locus_tag=NND05_11570;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=MCP9538172.1;transl_table=11 JANDXE010000024.1 Genbank gene 35371 36375 . - . ID=gene-NND05_11575;Name=NND05_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11575 JANDXE010000024.1 Protein Homology CDS 35371 36375 . - 0 ID=cds-MCP9538173.1;Parent=gene-NND05_11575;Dbxref=NCBI_GP:MCP9538173.1;Name=MCP9538173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378303.1;locus_tag=NND05_11575;product=acyltransferase;protein_id=MCP9538173.1;transl_table=11 JANDXE010000024.1 Genbank gene 36385 37530 . - . ID=gene-NND05_11580;Name=NND05_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11580 JANDXE010000024.1 Protein Homology CDS 36385 37530 . - 0 ID=cds-MCP9538174.1;Parent=gene-NND05_11580;Dbxref=NCBI_GP:MCP9538174.1;Name=MCP9538174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847976.1;locus_tag=NND05_11580;product=acyltransferase;protein_id=MCP9538174.1;transl_table=11 JANDXE010000024.1 Genbank gene 37527 39458 . - . ID=gene-NND05_11585;Name=NND05_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11585 JANDXE010000024.1 Protein Homology CDS 37527 39458 . - 0 ID=cds-MCP9538175.1;Parent=gene-NND05_11585;Dbxref=NCBI_GP:MCP9538175.1;Name=MCP9538175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847975.1;locus_tag=NND05_11585;product=lipid A phosphoethanolamine transferase;protein_id=MCP9538175.1;transl_table=11 JANDXE010000024.1 Genbank gene 39514 40107 . - . ID=gene-NND05_11590;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=NND05_11590 JANDXE010000024.1 Protein Homology CDS 39514 40107 . - 0 ID=cds-MCP9538176.1;Parent=gene-NND05_11590;Dbxref=NCBI_GP:MCP9538176.1;Name=MCP9538176.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004356959.1;locus_tag=NND05_11590;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=MCP9538176.1;transl_table=11 JANDXE010000024.1 Genbank gene 40165 40740 . - . ID=gene-NND05_11595;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NND05_11595 JANDXE010000024.1 Protein Homology CDS 40165 40740 . - 0 ID=cds-MCP9538177.1;Parent=gene-NND05_11595;Dbxref=NCBI_GP:MCP9538177.1;Name=MCP9538177.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847973.1;locus_tag=NND05_11595;product=guanylate kinase;protein_id=MCP9538177.1;transl_table=11 JANDXE010000024.1 Genbank gene 40812 41690 . - . ID=gene-NND05_11600;Name=NND05_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11600 JANDXE010000024.1 Protein Homology CDS 40812 41690 . - 0 ID=cds-MCP9538178.1;Parent=gene-NND05_11600;Dbxref=NCBI_GP:MCP9538178.1;Name=MCP9538178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135221.1;locus_tag=NND05_11600;product=YicC family protein;protein_id=MCP9538178.1;transl_table=11 JANDXE010000024.1 Genbank gene 41782 42474 . + . ID=gene-NND05_11605;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=NND05_11605 JANDXE010000024.1 Protein Homology CDS 41782 42474 . + 0 ID=cds-MCP9538179.1;Parent=gene-NND05_11605;Dbxref=NCBI_GP:MCP9538179.1;Name=MCP9538179.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920283.1;locus_tag=NND05_11605;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MCP9538179.1;transl_table=11 JANDXE010000024.1 Genbank gene 42555 43160 . + . ID=gene-NND05_11610;Name=NND05_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11610 JANDXE010000024.1 Protein Homology CDS 42555 43160 . + 0 ID=cds-MCP9538180.1;Parent=gene-NND05_11610;Dbxref=NCBI_GP:MCP9538180.1;Name=MCP9538180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847970.1;locus_tag=NND05_11610;product=DUF4290 domain-containing protein;protein_id=MCP9538180.1;transl_table=11 JANDXE010000024.1 Genbank gene 43209 44519 . + . ID=gene-NND05_11615;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NND05_11615 JANDXE010000024.1 Protein Homology CDS 43209 44519 . + 0 ID=cds-MCP9538181.1;Parent=gene-NND05_11615;Dbxref=NCBI_GP:MCP9538181.1;Name=MCP9538181.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375428.1;locus_tag=NND05_11615;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MCP9538181.1;transl_table=11 JANDXE010000024.1 Genbank gene 44605 45126 . + . ID=gene-NND05_11620;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NND05_11620 JANDXE010000024.1 Protein Homology CDS 44605 45126 . + 0 ID=cds-MCP9538182.1;Parent=gene-NND05_11620;Dbxref=NCBI_GP:MCP9538182.1;Name=MCP9538182.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344211.1;locus_tag=NND05_11620;product=ribosome maturation factor RimM;protein_id=MCP9538182.1;transl_table=11 JANDXE010000024.1 Genbank gene 45173 46336 . + . ID=gene-NND05_11625;Name=NND05_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11625 JANDXE010000024.1 Protein Homology CDS 45173 46336 . + 0 ID=cds-MCP9538183.1;Parent=gene-NND05_11625;Dbxref=NCBI_GP:MCP9538183.1;Name=MCP9538183.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281322.1;locus_tag=NND05_11625;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=MCP9538183.1;transl_table=11 JANDXE010000024.1 Genbank gene 46426 47808 . + . ID=gene-NND05_11630;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=NND05_11630 JANDXE010000024.1 Protein Homology CDS 46426 47808 . + 0 ID=cds-MCP9538184.1;Parent=gene-NND05_11630;Dbxref=NCBI_GP:MCP9538184.1;Name=MCP9538184.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237788.1;locus_tag=NND05_11630;product=RIP metalloprotease RseP;protein_id=MCP9538184.1;transl_table=11 JANDXE010000024.1 Genbank gene 47906 48853 . - . ID=gene-NND05_11635;Name=NND05_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11635 JANDXE010000024.1 Protein Homology CDS 47906 48853 . - 0 ID=cds-MCP9538185.1;Parent=gene-NND05_11635;Dbxref=NCBI_GP:MCP9538185.1;Name=MCP9538185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410896.1;locus_tag=NND05_11635;product=M23 family metallopeptidase;protein_id=MCP9538185.1;transl_table=11 JANDXE010000024.1 Genbank gene 49124 49477 . - . ID=gene-NND05_11640;Name=NND05_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11640 JANDXE010000024.1 GeneMarkS-2+ CDS 49124 49477 . - 0 ID=cds-MCP9538186.1;Parent=gene-NND05_11640;Dbxref=NCBI_GP:MCP9538186.1;Name=MCP9538186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11640;product=hypothetical protein;protein_id=MCP9538186.1;transl_table=11 JANDXE010000024.1 Genbank gene 49581 51677 . - . ID=gene-NND05_11645;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=NND05_11645 JANDXE010000024.1 Protein Homology CDS 49581 51677 . - 0 ID=cds-MCP9538187.1;Parent=gene-NND05_11645;Dbxref=NCBI_GP:MCP9538187.1;Name=MCP9538187.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919870.1;locus_tag=NND05_11645;product=ATP-dependent DNA helicase RecG;protein_id=MCP9538187.1;transl_table=11 JANDXE010000024.1 Genbank gene 51765 52436 . - . ID=gene-NND05_11650;Name=NND05_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11650 JANDXE010000024.1 Protein Homology CDS 51765 52436 . - 0 ID=cds-MCP9538188.1;Parent=gene-NND05_11650;Dbxref=NCBI_GP:MCP9538188.1;Name=MCP9538188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174874.1;locus_tag=NND05_11650;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MCP9538188.1;transl_table=11 JANDXE010000024.1 Genbank gene 52457 53029 . - . ID=gene-NND05_11655;Name=NND05_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11655 JANDXE010000024.1 Protein Homology CDS 52457 53029 . - 0 ID=cds-MCP9538189.1;Parent=gene-NND05_11655;Dbxref=NCBI_GP:MCP9538189.1;Name=MCP9538189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847960.1;locus_tag=NND05_11655;product=DJ-1/PfpI family protein;protein_id=MCP9538189.1;transl_table=11 JANDXE010000024.1 Genbank gene 53117 54007 . + . ID=gene-NND05_11660;Name=NND05_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11660 JANDXE010000024.1 Protein Homology CDS 53117 54007 . + 0 ID=cds-MCP9538190.1;Parent=gene-NND05_11660;Dbxref=NCBI_GP:MCP9538190.1;Name=MCP9538190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847959.1;locus_tag=NND05_11660;product=NAD kinase;protein_id=MCP9538190.1;transl_table=11 JANDXE010000024.1 Genbank gene 54254 56281 . - . ID=gene-NND05_11665;Name=NND05_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11665 JANDXE010000024.1 Protein Homology CDS 54254 56281 . - 0 ID=cds-MCP9538191.1;Parent=gene-NND05_11665;Dbxref=NCBI_GP:MCP9538191.1;Name=MCP9538191.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435504.1;locus_tag=NND05_11665;product=alpha-amylase family glycosyl hydrolase;protein_id=MCP9538191.1;transl_table=11 JANDXE010000024.1 Genbank gene 56831 57322 . + . ID=gene-NND05_11670;Name=NND05_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11670 JANDXE010000024.1 GeneMarkS-2+ CDS 56831 57322 . + 0 ID=cds-MCP9538192.1;Parent=gene-NND05_11670;Dbxref=NCBI_GP:MCP9538192.1;Name=MCP9538192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11670;product=hypothetical protein;protein_id=MCP9538192.1;transl_table=11 ##sequence-region JANDXE010000025.1 1 53517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000025.1 Genbank region 1 53517 . + . ID=JANDXE010000025.1:1..53517;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000025.1 Genbank gene 1 179 . + . ID=gene-NND05_11675;Name=NND05_11675;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_11675;partial=true;start_range=.,1 JANDXE010000025.1 cmsearch rRNA 1 179 . + . ID=rna-NND05_11675;Parent=gene-NND05_11675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_11675;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000025.1 cmsearch exon 1 179 . + . ID=exon-NND05_11675-1;Parent=rna-NND05_11675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_11675;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000025.1 Genbank gene 254 366 . + . ID=gene-NND05_11680;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_11680 JANDXE010000025.1 cmsearch rRNA 254 366 . + . ID=rna-NND05_11680;Parent=gene-NND05_11680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_11680;product=5S ribosomal RNA JANDXE010000025.1 cmsearch exon 254 366 . + . ID=exon-NND05_11680-1;Parent=rna-NND05_11680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_11680;product=5S ribosomal RNA JANDXE010000025.1 Genbank gene 715 1155 . + . ID=gene-NND05_11685;Name=NND05_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11685 JANDXE010000025.1 Protein Homology CDS 715 1155 . + 0 ID=cds-MCP9538193.1;Parent=gene-NND05_11685;Dbxref=NCBI_GP:MCP9538193.1;Name=MCP9538193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847903.1;locus_tag=NND05_11685;product=lytic transglycosylase domain-containing protein;protein_id=MCP9538193.1;transl_table=11 JANDXE010000025.1 Genbank gene 1417 1492 . + . ID=gene-NND05_11690;Name=NND05_11690;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_11690 JANDXE010000025.1 tRNAscan-SE tRNA 1417 1492 . + . ID=rna-NND05_11690;Parent=gene-NND05_11690;anticodon=(pos:1450..1452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_11690;product=tRNA-Met JANDXE010000025.1 tRNAscan-SE exon 1417 1492 . + . ID=exon-NND05_11690-1;Parent=rna-NND05_11690;anticodon=(pos:1450..1452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_11690;product=tRNA-Met JANDXE010000025.1 Genbank gene 1773 2369 . + . ID=gene-NND05_11695;Name=NND05_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11695 JANDXE010000025.1 Protein Homology CDS 1773 2369 . + 0 ID=cds-MCP9538194.1;Parent=gene-NND05_11695;Dbxref=NCBI_GP:MCP9538194.1;Name=MCP9538194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340347.1;locus_tag=NND05_11695;product=TetR/AcrR family transcriptional regulator;protein_id=MCP9538194.1;transl_table=11 JANDXE010000025.1 Genbank gene 2415 3173 . + . ID=gene-NND05_11700;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NND05_11700 JANDXE010000025.1 Protein Homology CDS 2415 3173 . + 0 ID=cds-MCP9538195.1;Parent=gene-NND05_11700;Dbxref=NCBI_GP:MCP9538195.1;Name=MCP9538195.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010536417.1;locus_tag=NND05_11700;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=MCP9538195.1;transl_table=11 JANDXE010000025.1 Genbank gene 3201 3869 . + . ID=gene-NND05_11705;Name=NND05_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11705 JANDXE010000025.1 Protein Homology CDS 3201 3869 . + 0 ID=cds-MCP9538196.1;Parent=gene-NND05_11705;Dbxref=NCBI_GP:MCP9538196.1;Name=MCP9538196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367944.1;locus_tag=NND05_11705;product=RluA family pseudouridine synthase;protein_id=MCP9538196.1;transl_table=11 JANDXE010000025.1 Genbank gene 3889 8622 . + . ID=gene-NND05_11710;Name=NND05_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11710 JANDXE010000025.1 Protein Homology CDS 3889 8622 . + 0 ID=cds-MCP9538197.1;Parent=gene-NND05_11710;Dbxref=NCBI_GP:MCP9538197.1;Name=MCP9538197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281231.1;locus_tag=NND05_11710;product=translocation/assembly module TamB;protein_id=MCP9538197.1;transl_table=11 JANDXE010000025.1 Genbank gene 8633 11032 . + . ID=gene-NND05_11715;Name=NND05_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11715 JANDXE010000025.1 Protein Homology CDS 8633 11032 . + 0 ID=cds-MCP9538198.1;Parent=gene-NND05_11715;Dbxref=NCBI_GP:MCP9538198.1;Name=MCP9538198.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367946.1;locus_tag=NND05_11715;product=BamA/TamA family outer membrane protein;protein_id=MCP9538198.1;transl_table=11 JANDXE010000025.1 Genbank gene 11213 12124 . + . ID=gene-NND05_11720;Name=NND05_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11720 JANDXE010000025.1 Protein Homology CDS 11213 12124 . + 0 ID=cds-MCP9538199.1;Parent=gene-NND05_11720;Dbxref=NCBI_GP:MCP9538199.1;Name=MCP9538199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566319.1;locus_tag=NND05_11720;product=nucleotidyltransferase;protein_id=MCP9538199.1;transl_table=11 JANDXE010000025.1 Genbank gene 12140 13174 . + . ID=gene-NND05_11725;Name=NND05_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11725 JANDXE010000025.1 Protein Homology CDS 12140 13174 . + 0 ID=cds-MCP9538200.1;Parent=gene-NND05_11725;Dbxref=NCBI_GP:MCP9538200.1;Name=MCP9538200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967284.1;locus_tag=NND05_11725;product=DHH family phosphoesterase;protein_id=MCP9538200.1;transl_table=11 JANDXE010000025.1 Genbank gene 13341 14051 . + . ID=gene-NND05_11730;Name=NND05_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11730 JANDXE010000025.1 Protein Homology CDS 13341 14051 . + 0 ID=cds-MCP9538201.1;Parent=gene-NND05_11730;Dbxref=NCBI_GP:MCP9538201.1;Name=MCP9538201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281237.1;locus_tag=NND05_11730;product=DUF4827 domain-containing protein;protein_id=MCP9538201.1;transl_table=11 JANDXE010000025.1 Genbank gene 14081 15472 . + . ID=gene-NND05_11735;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=NND05_11735 JANDXE010000025.1 Protein Homology CDS 14081 15472 . + 0 ID=cds-MCP9538202.1;Parent=gene-NND05_11735;Dbxref=NCBI_GP:MCP9538202.1;Name=MCP9538202.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847894.1;locus_tag=NND05_11735;product=phosphoglucosamine mutase;protein_id=MCP9538202.1;transl_table=11 JANDXE010000025.1 Genbank gene 15603 16346 . - . ID=gene-NND05_11740;Name=NND05_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11740 JANDXE010000025.1 Protein Homology CDS 15603 16346 . - 0 ID=cds-MCP9538203.1;Parent=gene-NND05_11740;Dbxref=NCBI_GP:MCP9538203.1;Name=MCP9538203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847743.1;locus_tag=NND05_11740;product=hypothetical protein;protein_id=MCP9538203.1;transl_table=11 JANDXE010000025.1 Genbank gene 16406 17017 . - . ID=gene-NND05_11745;Name=NND05_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11745 JANDXE010000025.1 Protein Homology CDS 16406 17017 . - 0 ID=cds-MCP9538204.1;Parent=gene-NND05_11745;Dbxref=NCBI_GP:MCP9538204.1;Name=MCP9538204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376873.1;locus_tag=NND05_11745;product=polysaccharide deacetylase family protein;protein_id=MCP9538204.1;transl_table=11 JANDXE010000025.1 Genbank gene 17126 20560 . - . ID=gene-NND05_11750;Name=NND05_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11750 JANDXE010000025.1 Protein Homology CDS 17126 20560 . - 0 ID=cds-MCP9538205.1;Parent=gene-NND05_11750;Dbxref=NCBI_GP:MCP9538205.1;Name=MCP9538205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966428.1;locus_tag=NND05_11750;product=DUF2723 domain-containing protein;protein_id=MCP9538205.1;transl_table=11 JANDXE010000025.1 Genbank gene 20832 21599 . - . ID=gene-NND05_11755;Name=NND05_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11755 JANDXE010000025.1 Protein Homology CDS 20832 21599 . - 0 ID=cds-MCP9538206.1;Parent=gene-NND05_11755;Dbxref=NCBI_GP:MCP9538206.1;Name=MCP9538206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463789.1;locus_tag=NND05_11755;product=ABC transporter ATP-binding protein;protein_id=MCP9538206.1;transl_table=11 JANDXE010000025.1 Genbank gene 21654 22547 . - . ID=gene-NND05_11760;Name=NND05_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11760 JANDXE010000025.1 Protein Homology CDS 21654 22547 . - 0 ID=cds-MCP9538207.1;Parent=gene-NND05_11760;Dbxref=NCBI_GP:MCP9538207.1;Name=MCP9538207.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.2;locus_tag=NND05_11760;product=zinc ABC transporter substrate-binding protein;protein_id=MCP9538207.1;transl_table=11 JANDXE010000025.1 Genbank gene 22587 23039 . - . ID=gene-NND05_11765;Name=NND05_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11765 JANDXE010000025.1 Protein Homology CDS 22587 23039 . - 0 ID=cds-MCP9538208.1;Parent=gene-NND05_11765;Dbxref=NCBI_GP:MCP9538208.1;Name=MCP9538208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340405.1;locus_tag=NND05_11765;product=VTT domain-containing protein;protein_id=MCP9538208.1;transl_table=11 JANDXE010000025.1 Genbank gene 23124 24086 . - . ID=gene-NND05_11770;Name=NND05_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11770 JANDXE010000025.1 GeneMarkS-2+ CDS 23124 24086 . - 0 ID=cds-MCP9538209.1;Parent=gene-NND05_11770;Dbxref=NCBI_GP:MCP9538209.1;Name=MCP9538209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_11770;product=hypothetical protein;protein_id=MCP9538209.1;transl_table=11 JANDXE010000025.1 Genbank gene 24113 25381 . - . ID=gene-NND05_11775;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NND05_11775 JANDXE010000025.1 Protein Homology CDS 24113 25381 . - 0 ID=cds-MCP9538210.1;Parent=gene-NND05_11775;Dbxref=NCBI_GP:MCP9538210.1;Name=MCP9538210.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372224.1;locus_tag=NND05_11775;product=phosphoribosylamine--glycine ligase;protein_id=MCP9538210.1;transl_table=11 JANDXE010000025.1 Genbank gene 25551 27515 . - . ID=gene-NND05_11780;Name=NND05_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11780 JANDXE010000025.1 Protein Homology CDS 25551 27515 . - 0 ID=cds-MCP9538211.1;Parent=gene-NND05_11780;Dbxref=NCBI_GP:MCP9538211.1;Name=MCP9538211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024878.2;locus_tag=NND05_11780;product=hypothetical protein;protein_id=MCP9538211.1;transl_table=11 JANDXE010000025.1 Genbank gene 27580 29820 . - . ID=gene-NND05_11785;Name=NND05_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11785 JANDXE010000025.1 Protein Homology CDS 27580 29820 . - 0 ID=cds-MCP9538212.1;Parent=gene-NND05_11785;Dbxref=NCBI_GP:MCP9538212.1;Name=MCP9538212.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463785.1;locus_tag=NND05_11785;product=DPP IV N-terminal domain-containing protein;protein_id=MCP9538212.1;transl_table=11 JANDXE010000025.1 Genbank gene 30040 31620 . - . ID=gene-NND05_11790;Name=NND05_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11790 JANDXE010000025.1 Protein Homology CDS 30040 31620 . - 0 ID=cds-MCP9538213.1;Parent=gene-NND05_11790;Dbxref=NCBI_GP:MCP9538213.1;Name=MCP9538213.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847733.1;locus_tag=NND05_11790;product=THUMP domain-containing protein;protein_id=MCP9538213.1;transl_table=11 JANDXE010000025.1 Genbank gene 31604 32545 . - . ID=gene-NND05_11795;Name=NND05_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11795 JANDXE010000025.1 Protein Homology CDS 31604 32545 . - 0 ID=cds-MCP9538214.1;Parent=gene-NND05_11795;Dbxref=NCBI_GP:MCP9538214.1;Name=MCP9538214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968652.1;locus_tag=NND05_11795;product=serine O-acetyltransferase;protein_id=MCP9538214.1;transl_table=11 JANDXE010000025.1 Genbank gene 32634 33980 . - . ID=gene-NND05_11800;Name=NND05_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11800 JANDXE010000025.1 Protein Homology CDS 32634 33980 . - 0 ID=cds-MCP9538215.1;Parent=gene-NND05_11800;Dbxref=NCBI_GP:MCP9538215.1;Name=MCP9538215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016665567.1;locus_tag=NND05_11800;product=MATE family efflux transporter;protein_id=MCP9538215.1;transl_table=11 JANDXE010000025.1 Genbank gene 34187 35338 . + . ID=gene-NND05_11805;Name=NND05_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11805 JANDXE010000025.1 Protein Homology CDS 34187 35338 . + 0 ID=cds-MCP9538216.1;Parent=gene-NND05_11805;Dbxref=NCBI_GP:MCP9538216.1;Name=MCP9538216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847729.1;locus_tag=NND05_11805;product=N-acetyltransferase;protein_id=MCP9538216.1;transl_table=11 JANDXE010000025.1 Genbank gene 35378 37012 . + . ID=gene-NND05_11810;Name=NND05_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11810 JANDXE010000025.1 Protein Homology CDS 35378 37012 . + 0 ID=cds-MCP9538217.1;Parent=gene-NND05_11810;Dbxref=NCBI_GP:MCP9538217.1;Name=MCP9538217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=NND05_11810;product=NTP transferase domain-containing protein;protein_id=MCP9538217.1;transl_table=11 JANDXE010000025.1 Genbank gene 37124 38038 . + . ID=gene-NND05_11815;Name=NND05_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11815 JANDXE010000025.1 Protein Homology CDS 37124 38038 . + 0 ID=cds-MCP9538218.1;Parent=gene-NND05_11815;Dbxref=NCBI_GP:MCP9538218.1;Name=MCP9538218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272233.1;locus_tag=NND05_11815;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=MCP9538218.1;transl_table=11 JANDXE010000025.1 Genbank gene 38058 39116 . + . ID=gene-NND05_11820;Name=NND05_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11820 JANDXE010000025.1 Protein Homology CDS 38058 39116 . + 0 ID=cds-MCP9538219.1;Parent=gene-NND05_11820;Dbxref=NCBI_GP:MCP9538219.1;Name=MCP9538219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009130073.1;locus_tag=NND05_11820;product=flippase-like domain-containing protein;protein_id=MCP9538219.1;transl_table=11 JANDXE010000025.1 Genbank gene 39116 39970 . + . ID=gene-NND05_11825;Name=NND05_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11825 JANDXE010000025.1 Protein Homology CDS 39116 39970 . + 0 ID=cds-MCP9538220.1;Parent=gene-NND05_11825;Dbxref=NCBI_GP:MCP9538220.1;Name=MCP9538220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235640.1;locus_tag=NND05_11825;product=HAD family hydrolase;protein_id=MCP9538220.1;transl_table=11 JANDXE010000025.1 Genbank gene 40089 42641 . + . ID=gene-NND05_11830;Name=NND05_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11830 JANDXE010000025.1 Protein Homology CDS 40089 42641 . + 0 ID=cds-MCP9538221.1;Parent=gene-NND05_11830;Dbxref=NCBI_GP:MCP9538221.1;Name=MCP9538221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847726.1;locus_tag=NND05_11830;product=DUF5686 and carboxypeptidase regulatory-like domain-containing protein;protein_id=MCP9538221.1;transl_table=11 JANDXE010000025.1 Genbank gene 42755 43393 . + . ID=gene-NND05_11835;Name=NND05_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11835 JANDXE010000025.1 Protein Homology CDS 42755 43393 . + 0 ID=cds-MCP9538222.1;Parent=gene-NND05_11835;Dbxref=NCBI_GP:MCP9538222.1;Name=MCP9538222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376843.1;locus_tag=NND05_11835;product=response regulator transcription factor;protein_id=MCP9538222.1;transl_table=11 JANDXE010000025.1 Genbank gene 43542 47696 . + . ID=gene-NND05_11840;Name=NND05_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11840 JANDXE010000025.1 Protein Homology CDS 43542 47696 . + 0 ID=cds-MCP9538223.1;Parent=gene-NND05_11840;Dbxref=NCBI_GP:MCP9538223.1;Name=MCP9538223.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_11840;product=response regulator;protein_id=MCP9538223.1;transl_table=11 JANDXE010000025.1 Genbank gene 47879 50833 . + . ID=gene-NND05_11845;Name=NND05_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11845 JANDXE010000025.1 Protein Homology CDS 47879 50833 . + 0 ID=cds-MCP9538224.1;Parent=gene-NND05_11845;Dbxref=NCBI_GP:MCP9538224.1;Name=MCP9538224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410922.1;locus_tag=NND05_11845;product=DUF5110 domain-containing protein;protein_id=MCP9538224.1;transl_table=11 JANDXE010000025.1 Genbank gene 50835 53375 . + . ID=gene-NND05_11850;Name=NND05_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11850 JANDXE010000025.1 Protein Homology CDS 50835 53375 . + 0 ID=cds-MCP9538225.1;Parent=gene-NND05_11850;Dbxref=NCBI_GP:MCP9538225.1;Name=MCP9538225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342986.1;locus_tag=NND05_11850;product=DUF4982 domain-containing protein;protein_id=MCP9538225.1;transl_table=11 ##sequence-region JANDXE010000026.1 1 49969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000026.1 Genbank region 1 49969 . + . ID=JANDXE010000026.1:1..49969;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000026.1 Genbank gene 1 818 . + . ID=gene-NND05_11855;Name=NND05_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11855;partial=true;start_range=.,1 JANDXE010000026.1 Protein Homology CDS 1 818 . + 2 ID=cds-MCP9538226.1;Parent=gene-NND05_11855;Dbxref=NCBI_GP:MCP9538226.1;Name=MCP9538226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965207.1;locus_tag=NND05_11855;partial=true;product=transposase;protein_id=MCP9538226.1;start_range=.,1;transl_table=11 JANDXE010000026.1 Genbank gene 1059 2552 . - . ID=gene-NND05_11860;Name=NND05_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11860 JANDXE010000026.1 Protein Homology CDS 1059 2552 . - 0 ID=cds-MCP9538227.1;Parent=gene-NND05_11860;Dbxref=NCBI_GP:MCP9538227.1;Name=MCP9538227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848550.1;locus_tag=NND05_11860;product=putative DNA binding domain-containing protein;protein_id=MCP9538227.1;transl_table=11 JANDXE010000026.1 Genbank pseudogene 2685 3733 . - . ID=gene-NND05_11865;Name=NND05_11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_11865;pseudo=true JANDXE010000026.1 Protein Homology CDS 2685 3733 . - 0 ID=cds-NND05_11865;Parent=gene-NND05_11865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009121578.1;locus_tag=NND05_11865;product=PDDEXK nuclease domain-containing protein;pseudo=true;transl_table=11 JANDXE010000026.1 Genbank gene 3778 3963 . - . ID=gene-NND05_11870;Name=NND05_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11870 JANDXE010000026.1 Protein Homology CDS 3778 3963 . - 0 ID=cds-MCP9538228.1;Parent=gene-NND05_11870;Dbxref=NCBI_GP:MCP9538228.1;Name=MCP9538228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005799219.1;locus_tag=NND05_11870;product=transcriptional regulator;protein_id=MCP9538228.1;transl_table=11 JANDXE010000026.1 Genbank gene 4617 5021 . - . ID=gene-NND05_11875;Name=NND05_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11875 JANDXE010000026.1 Protein Homology CDS 4617 5021 . - 0 ID=cds-MCP9538229.1;Parent=gene-NND05_11875;Dbxref=NCBI_GP:MCP9538229.1;Name=MCP9538229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=NND05_11875;product=hypothetical protein;protein_id=MCP9538229.1;transl_table=11 JANDXE010000026.1 Genbank gene 5117 5392 . - . ID=gene-NND05_11880;Name=NND05_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11880 JANDXE010000026.1 Protein Homology CDS 5117 5392 . - 0 ID=cds-MCP9538230.1;Parent=gene-NND05_11880;Dbxref=NCBI_GP:MCP9538230.1;Name=MCP9538230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847131.1;locus_tag=NND05_11880;product=type II toxin-antitoxin system YafQ family toxin;protein_id=MCP9538230.1;transl_table=11 JANDXE010000026.1 Genbank gene 5389 5595 . - . ID=gene-NND05_11885;Name=NND05_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11885 JANDXE010000026.1 Protein Homology CDS 5389 5595 . - 0 ID=cds-MCP9538231.1;Parent=gene-NND05_11885;Dbxref=NCBI_GP:MCP9538231.1;Name=MCP9538231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860990.1;locus_tag=NND05_11885;product=hypothetical protein;protein_id=MCP9538231.1;transl_table=11 JANDXE010000026.1 Genbank gene 6370 7623 . - . ID=gene-NND05_11890;Name=NND05_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11890 JANDXE010000026.1 Protein Homology CDS 6370 7623 . - 0 ID=cds-MCP9538232.1;Parent=gene-NND05_11890;Dbxref=NCBI_GP:MCP9538232.1;Name=MCP9538232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005832172.1;locus_tag=NND05_11890;product=ATP-binding protein;protein_id=MCP9538232.1;transl_table=11 JANDXE010000026.1 Genbank gene 8119 9570 . - . ID=gene-NND05_11895;Name=NND05_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11895 JANDXE010000026.1 Protein Homology CDS 8119 9570 . - 0 ID=cds-MCP9538233.1;Parent=gene-NND05_11895;Dbxref=NCBI_GP:MCP9538233.1;Name=MCP9538233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844913.1;locus_tag=NND05_11895;product=DUF5115 domain-containing protein;protein_id=MCP9538233.1;transl_table=11 JANDXE010000026.1 Genbank gene 9595 10749 . - . ID=gene-NND05_11900;Name=NND05_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11900 JANDXE010000026.1 Protein Homology CDS 9595 10749 . - 0 ID=cds-MCP9538234.1;Parent=gene-NND05_11900;Dbxref=NCBI_GP:MCP9538234.1;Name=MCP9538234.1;Ontology_term=GO:2001070,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=starch binding|2001070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005838912.1;locus_tag=NND05_11900;product=SusF/SusE family outer membrane protein;protein_id=MCP9538234.1;transl_table=11 JANDXE010000026.1 Genbank gene 10776 12395 . - . ID=gene-NND05_11905;Name=NND05_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11905 JANDXE010000026.1 Protein Homology CDS 10776 12395 . - 0 ID=cds-MCP9538235.1;Parent=gene-NND05_11905;Dbxref=NCBI_GP:MCP9538235.1;Name=MCP9538235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919859.1;locus_tag=NND05_11905;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9538235.1;transl_table=11 JANDXE010000026.1 Genbank gene 12414 15497 . - . ID=gene-NND05_11910;Name=NND05_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11910 JANDXE010000026.1 Protein Homology CDS 12414 15497 . - 0 ID=cds-MCP9538236.1;Parent=gene-NND05_11910;Dbxref=NCBI_GP:MCP9538236.1;Name=MCP9538236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345014.1;locus_tag=NND05_11910;product=TonB-dependent receptor;protein_id=MCP9538236.1;transl_table=11 JANDXE010000026.1 Genbank gene 15778 16803 . + . ID=gene-NND05_11915;Name=NND05_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11915 JANDXE010000026.1 Protein Homology CDS 15778 16803 . + 0 ID=cds-MCP9538237.1;Parent=gene-NND05_11915;Dbxref=NCBI_GP:MCP9538237.1;Name=MCP9538237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371283.1;locus_tag=NND05_11915;product=LacI family transcriptional regulator;protein_id=MCP9538237.1;transl_table=11 JANDXE010000026.1 Genbank gene 16830 18143 . + . ID=gene-NND05_11920;Name=NND05_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11920 JANDXE010000026.1 Protein Homology CDS 16830 18143 . + 0 ID=cds-MCP9538238.1;Parent=gene-NND05_11920;Dbxref=NCBI_GP:MCP9538238.1;Name=MCP9538238.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368672.1;locus_tag=NND05_11920;product=MFS transporter;protein_id=MCP9538238.1;transl_table=11 JANDXE010000026.1 Genbank gene 18287 20965 . + . ID=gene-NND05_11925;Name=NND05_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11925 JANDXE010000026.1 Protein Homology CDS 18287 20965 . + 0 ID=cds-MCP9538239.1;Parent=gene-NND05_11925;Dbxref=NCBI_GP:MCP9538239.1;Name=MCP9538239.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919854.1;locus_tag=NND05_11925;product=4-alpha-glucanotransferase;protein_id=MCP9538239.1;transl_table=11 JANDXE010000026.1 Genbank gene 21183 23318 . + . ID=gene-NND05_11930;Name=NND05_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11930 JANDXE010000026.1 Protein Homology CDS 21183 23318 . + 0 ID=cds-MCP9538240.1;Parent=gene-NND05_11930;Dbxref=NCBI_GP:MCP9538240.1;Name=MCP9538240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336443.1;locus_tag=NND05_11930;product=glycoside hydrolase family 97 protein;protein_id=MCP9538240.1;transl_table=11 JANDXE010000026.1 Genbank gene 23464 25434 . + . ID=gene-NND05_11935;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=NND05_11935 JANDXE010000026.1 Protein Homology CDS 23464 25434 . + 0 ID=cds-MCP9538241.1;Parent=gene-NND05_11935;Dbxref=NCBI_GP:MCP9538241.1;Name=MCP9538241.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848540.1;locus_tag=NND05_11935;product=type I pullulanase;protein_id=MCP9538241.1;transl_table=11 JANDXE010000026.1 Genbank gene 25487 27412 . + . ID=gene-NND05_11940;Name=NND05_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11940 JANDXE010000026.1 Protein Homology CDS 25487 27412 . + 0 ID=cds-MCP9538242.1;Parent=gene-NND05_11940;Dbxref=NCBI_GP:MCP9538242.1;Name=MCP9538242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368667.1;locus_tag=NND05_11940;product=glycoside hydrolase family 13 protein;protein_id=MCP9538242.1;transl_table=11 JANDXE010000026.1 Genbank gene 27535 30507 . + . ID=gene-NND05_11945;Name=NND05_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11945 JANDXE010000026.1 Protein Homology CDS 27535 30507 . + 0 ID=cds-MCP9538243.1;Parent=gene-NND05_11945;Dbxref=NCBI_GP:MCP9538243.1;Name=MCP9538243.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848536.1;locus_tag=NND05_11945;product=helix-turn-helix domain-containing protein;protein_id=MCP9538243.1;transl_table=11 JANDXE010000026.1 Genbank gene 30827 34030 . + . ID=gene-NND05_11950;Name=NND05_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11950 JANDXE010000026.1 Protein Homology CDS 30827 34030 . + 0 ID=cds-MCP9538244.1;Parent=gene-NND05_11950;Dbxref=NCBI_GP:MCP9538244.1;Name=MCP9538244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007854648.1;locus_tag=NND05_11950;product=TonB-dependent receptor;protein_id=MCP9538244.1;transl_table=11 JANDXE010000026.1 Genbank gene 34085 35842 . + . ID=gene-NND05_11955;Name=NND05_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11955 JANDXE010000026.1 Protein Homology CDS 34085 35842 . + 0 ID=cds-MCP9538245.1;Parent=gene-NND05_11955;Dbxref=NCBI_GP:MCP9538245.1;Name=MCP9538245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015531601.1;locus_tag=NND05_11955;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9538245.1;transl_table=11 JANDXE010000026.1 Genbank gene 35871 37853 . + . ID=gene-NND05_11960;Name=NND05_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11960 JANDXE010000026.1 Protein Homology CDS 35871 37853 . + 0 ID=cds-MCP9538246.1;Parent=gene-NND05_11960;Dbxref=NCBI_GP:MCP9538246.1;Name=MCP9538246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007560261.1;locus_tag=NND05_11960;product=hypothetical protein;protein_id=MCP9538246.1;transl_table=11 JANDXE010000026.1 Genbank gene 37964 39658 . + . ID=gene-NND05_11965;Name=NND05_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11965 JANDXE010000026.1 Protein Homology CDS 37964 39658 . + 0 ID=cds-MCP9538247.1;Parent=gene-NND05_11965;Dbxref=NCBI_GP:MCP9538247.1;Name=MCP9538247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463528.1;locus_tag=NND05_11965;product=arabinan endo-1%2C5-alpha-L-arabinosidase;protein_id=MCP9538247.1;transl_table=11 JANDXE010000026.1 Genbank gene 39930 40862 . + . ID=gene-NND05_11970;Name=NND05_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11970 JANDXE010000026.1 Protein Homology CDS 39930 40862 . + 0 ID=cds-MCP9538248.1;Parent=gene-NND05_11970;Dbxref=NCBI_GP:MCP9538248.1;Name=MCP9538248.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007572555.1;locus_tag=NND05_11970;product=family 43 glycosylhydrolase;protein_id=MCP9538248.1;transl_table=11 JANDXE010000026.1 Genbank gene 41246 42562 . + . ID=gene-NND05_11975;Name=NND05_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11975 JANDXE010000026.1 Protein Homology CDS 41246 42562 . + 0 ID=cds-MCP9538249.1;Parent=gene-NND05_11975;Dbxref=NCBI_GP:MCP9538249.1;Name=MCP9538249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=NND05_11975;product=ATP-binding protein;protein_id=MCP9538249.1;transl_table=11 JANDXE010000026.1 Genbank gene 42566 43870 . + . ID=gene-NND05_11980;Name=NND05_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11980 JANDXE010000026.1 Protein Homology CDS 42566 43870 . + 0 ID=cds-MCP9538250.1;Parent=gene-NND05_11980;Dbxref=NCBI_GP:MCP9538250.1;Name=MCP9538250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004350596.1;locus_tag=NND05_11980;product=NCS2 family permease;protein_id=MCP9538250.1;transl_table=11 JANDXE010000026.1 Genbank gene 44047 46488 . - . ID=gene-NND05_11985;Name=NND05_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11985 JANDXE010000026.1 Protein Homology CDS 44047 46488 . - 0 ID=cds-MCP9538251.1;Parent=gene-NND05_11985;Dbxref=NCBI_GP:MCP9538251.1;Name=MCP9538251.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848527.1;locus_tag=NND05_11985;product=carbohydrate binding domain-containing protein;protein_id=MCP9538251.1;transl_table=11 JANDXE010000026.1 Genbank gene 47101 48324 . + . ID=gene-NND05_11990;Name=NND05_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11990 JANDXE010000026.1 Protein Homology CDS 47101 48324 . + 0 ID=cds-MCP9538252.1;Parent=gene-NND05_11990;Dbxref=NCBI_GP:MCP9538252.1;Name=MCP9538252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337707.1;locus_tag=NND05_11990;product=site-specific integrase;protein_id=MCP9538252.1;transl_table=11 JANDXE010000026.1 Genbank gene 49108 49969 . + . ID=gene-NND05_11995;Name=NND05_11995;end_range=49969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_11995;partial=true JANDXE010000026.1 Protein Homology CDS 49108 49969 . + 0 ID=cds-MCP9538253.1;Parent=gene-NND05_11995;Dbxref=NCBI_GP:MCP9538253.1;Name=MCP9538253.1;end_range=49969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018149.1;locus_tag=NND05_11995;partial=true;product=DUF5906 domain-containing protein;protein_id=MCP9538253.1;transl_table=11 ##sequence-region JANDXE010000027.1 1 44627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000027.1 Genbank region 1 44627 . + . ID=JANDXE010000027.1:1..44627;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000027.1 Genbank gene 1 165 . + . ID=gene-NND05_12000;Name=NND05_12000;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_12000;partial=true;start_range=.,1 JANDXE010000027.1 cmsearch rRNA 1 165 . + . ID=rna-NND05_12000;Parent=gene-NND05_12000;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12000;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000027.1 cmsearch exon 1 165 . + . ID=exon-NND05_12000-1;Parent=rna-NND05_12000;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12000;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000027.1 Genbank gene 271 383 . + . ID=gene-NND05_12005;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_12005 JANDXE010000027.1 cmsearch rRNA 271 383 . + . ID=rna-NND05_12005;Parent=gene-NND05_12005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12005;product=5S ribosomal RNA JANDXE010000027.1 cmsearch exon 271 383 . + . ID=exon-NND05_12005-1;Parent=rna-NND05_12005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12005;product=5S ribosomal RNA JANDXE010000027.1 Genbank gene 441 1610 . + . ID=gene-NND05_12010;Name=NND05_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12010 JANDXE010000027.1 Protein Homology CDS 441 1610 . + 0 ID=cds-MCP9538254.1;Parent=gene-NND05_12010;Dbxref=NCBI_GP:MCP9538254.1;Name=MCP9538254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848358.1;locus_tag=NND05_12010;product=HAMP domain-containing histidine kinase;protein_id=MCP9538254.1;transl_table=11 JANDXE010000027.1 Genbank gene 1758 2276 . + . ID=gene-NND05_12015;Name=NND05_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12015 JANDXE010000027.1 Protein Homology CDS 1758 2276 . + 0 ID=cds-MCP9538255.1;Parent=gene-NND05_12015;Dbxref=NCBI_GP:MCP9538255.1;Name=MCP9538255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004374201.1;locus_tag=NND05_12015;product=DUF177 domain-containing protein;protein_id=MCP9538255.1;transl_table=11 JANDXE010000027.1 Genbank gene 2306 2491 . + . ID=gene-NND05_12020;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NND05_12020 JANDXE010000027.1 Protein Homology CDS 2306 2491 . + 0 ID=cds-MCP9538256.1;Parent=gene-NND05_12020;Dbxref=NCBI_GP:MCP9538256.1;Name=MCP9538256.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012646.1;locus_tag=NND05_12020;product=50S ribosomal protein L32;protein_id=MCP9538256.1;transl_table=11 JANDXE010000027.1 Genbank gene 2491 3504 . + . ID=gene-NND05_12025;Name=NND05_12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12025 JANDXE010000027.1 Protein Homology CDS 2491 3504 . + 0 ID=cds-MCP9538257.1;Parent=gene-NND05_12025;Dbxref=NCBI_GP:MCP9538257.1;Name=MCP9538257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848355.1;locus_tag=NND05_12025;product=ketoacyl-ACP synthase III;protein_id=MCP9538257.1;transl_table=11 JANDXE010000027.1 Genbank gene 3626 4507 . + . ID=gene-NND05_12030;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NND05_12030 JANDXE010000027.1 Protein Homology CDS 3626 4507 . + 0 ID=cds-MCP9538258.1;Parent=gene-NND05_12030;Dbxref=NCBI_GP:MCP9538258.1;Name=MCP9538258.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911325.1;locus_tag=NND05_12030;product=GTPase Era;protein_id=MCP9538258.1;transl_table=11 JANDXE010000027.1 Genbank gene 4656 5969 . + . ID=gene-NND05_12035;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=NND05_12035 JANDXE010000027.1 Protein Homology CDS 4656 5969 . + 0 ID=cds-MCP9538259.1;Parent=gene-NND05_12035;Dbxref=NCBI_GP:MCP9538259.1;Name=MCP9538259.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434470.1;locus_tag=NND05_12035;product=ribosome biogenesis GTPase Der;protein_id=MCP9538259.1;transl_table=11 JANDXE010000027.1 Genbank gene 6019 6417 . + . ID=gene-NND05_12040;Name=NND05_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12040 JANDXE010000027.1 Protein Homology CDS 6019 6417 . + 0 ID=cds-MCP9538260.1;Parent=gene-NND05_12040;Dbxref=NCBI_GP:MCP9538260.1;Name=MCP9538260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848352.1;locus_tag=NND05_12040;product=hypothetical protein;protein_id=MCP9538260.1;transl_table=11 JANDXE010000027.1 Genbank gene 6675 7442 . - . ID=gene-NND05_12045;Name=NND05_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12045 JANDXE010000027.1 Protein Homology CDS 6675 7442 . - 0 ID=cds-MCP9538261.1;Parent=gene-NND05_12045;Dbxref=NCBI_GP:MCP9538261.1;Name=MCP9538261.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464899.1;locus_tag=NND05_12045;product=ATP-binding cassette domain-containing protein;protein_id=MCP9538261.1;transl_table=11 JANDXE010000027.1 Genbank gene 7454 8200 . - . ID=gene-NND05_12050;Name=NND05_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12050 JANDXE010000027.1 Protein Homology CDS 7454 8200 . - 0 ID=cds-MCP9538262.1;Parent=gene-NND05_12050;Dbxref=NCBI_GP:MCP9538262.1;Name=MCP9538262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018968027.1;locus_tag=NND05_12050;product=ABC transporter permease;protein_id=MCP9538262.1;transl_table=11 JANDXE010000027.1 Genbank gene 8333 9151 . + . ID=gene-NND05_12055;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=NND05_12055 JANDXE010000027.1 Protein Homology CDS 8333 9151 . + 0 ID=cds-MCP9538263.1;Parent=gene-NND05_12055;Dbxref=NCBI_GP:MCP9538263.1;Name=MCP9538263.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848349.1;locus_tag=NND05_12055;product=LPS export ABC transporter ATP-binding protein;protein_id=MCP9538263.1;transl_table=11 JANDXE010000027.1 Genbank gene 9312 10670 . + . ID=gene-NND05_12060;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NND05_12060 JANDXE010000027.1 Protein Homology CDS 9312 10670 . + 0 ID=cds-MCP9538264.1;Parent=gene-NND05_12060;Dbxref=NCBI_GP:MCP9538264.1;Name=MCP9538264.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264209.1;locus_tag=NND05_12060;product=trigger factor;protein_id=MCP9538264.1;transl_table=11 JANDXE010000027.1 Genbank gene 10806 11468 . + . ID=gene-NND05_12065;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NND05_12065 JANDXE010000027.1 Protein Homology CDS 10806 11468 . + 0 ID=cds-MCP9538265.1;Parent=gene-NND05_12065;Dbxref=NCBI_GP:MCP9538265.1;Name=MCP9538265.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009231443.1;locus_tag=NND05_12065;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=MCP9538265.1;transl_table=11 JANDXE010000027.1 Genbank gene 11528 12757 . + . ID=gene-NND05_12070;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NND05_12070 JANDXE010000027.1 Protein Homology CDS 11528 12757 . + 0 ID=cds-MCP9538266.1;Parent=gene-NND05_12070;Dbxref=NCBI_GP:MCP9538266.1;Name=MCP9538266.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004365484.1;locus_tag=NND05_12070;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=MCP9538266.1;transl_table=11 JANDXE010000027.1 Genbank gene 12867 15050 . + . ID=gene-NND05_12075;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NND05_12075 JANDXE010000027.1 Protein Homology CDS 12867 15050 . + 0 ID=cds-MCP9538267.1;Parent=gene-NND05_12075;Dbxref=NCBI_GP:MCP9538267.1;Name=MCP9538267.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919495.1;locus_tag=NND05_12075;product=DNA helicase RecQ;protein_id=MCP9538267.1;transl_table=11 JANDXE010000027.1 Genbank gene 15154 16638 . + . ID=gene-NND05_12080;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NND05_12080 JANDXE010000027.1 Protein Homology CDS 15154 16638 . + 0 ID=cds-MCP9538268.1;Parent=gene-NND05_12080;Dbxref=NCBI_GP:MCP9538268.1;Name=MCP9538268.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283552.1;locus_tag=NND05_12080;product=IMP dehydrogenase;protein_id=MCP9538268.1;transl_table=11 JANDXE010000027.1 Genbank gene 16655 18085 . + . ID=gene-NND05_12085;Name=NND05_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12085 JANDXE010000027.1 Protein Homology CDS 16655 18085 . + 0 ID=cds-MCP9538269.1;Parent=gene-NND05_12085;Dbxref=NCBI_GP:MCP9538269.1;Name=MCP9538269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283551.1;locus_tag=NND05_12085;product=peptidylprolyl isomerase;protein_id=MCP9538269.1;transl_table=11 JANDXE010000027.1 Genbank gene 18114 19568 . + . ID=gene-NND05_12090;Name=NND05_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12090 JANDXE010000027.1 Protein Homology CDS 18114 19568 . + 0 ID=cds-MCP9538270.1;Parent=gene-NND05_12090;Dbxref=NCBI_GP:MCP9538270.1;Name=MCP9538270.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372064.1;locus_tag=NND05_12090;product=peptidylprolyl isomerase;protein_id=MCP9538270.1;transl_table=11 JANDXE010000027.1 Genbank gene 19565 21394 . + . ID=gene-NND05_12095;Name=NND05_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12095 JANDXE010000027.1 Protein Homology CDS 19565 21394 . + 0 ID=cds-MCP9538271.1;Parent=gene-NND05_12095;Dbxref=NCBI_GP:MCP9538271.1;Name=MCP9538271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009231459.1;locus_tag=NND05_12095;product=hypothetical protein;protein_id=MCP9538271.1;transl_table=11 JANDXE010000027.1 Genbank gene 21409 23286 . + . ID=gene-NND05_12100;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NND05_12100 JANDXE010000027.1 Protein Homology CDS 21409 23286 . + 0 ID=cds-MCP9538272.1;Parent=gene-NND05_12100;Dbxref=NCBI_GP:MCP9538272.1;Name=MCP9538272.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237353.1;locus_tag=NND05_12100;product=DNA mismatch repair endonuclease MutL;protein_id=MCP9538272.1;transl_table=11 JANDXE010000027.1 Genbank gene 23379 24263 . + . ID=gene-NND05_12105;Name=NND05_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12105 JANDXE010000027.1 GeneMarkS-2+ CDS 23379 24263 . + 0 ID=cds-MCP9538273.1;Parent=gene-NND05_12105;Dbxref=NCBI_GP:MCP9538273.1;Name=MCP9538273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12105;product=OmpA family protein;protein_id=MCP9538273.1;transl_table=11 JANDXE010000027.1 Genbank gene 24423 24497 . + . ID=gene-NND05_12110;Name=NND05_12110;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12110 JANDXE010000027.1 tRNAscan-SE tRNA 24423 24497 . + . ID=rna-NND05_12110;Parent=gene-NND05_12110;anticodon=(pos:24458..24460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12110;product=tRNA-Val JANDXE010000027.1 tRNAscan-SE exon 24423 24497 . + . ID=exon-NND05_12110-1;Parent=rna-NND05_12110;anticodon=(pos:24458..24460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12110;product=tRNA-Val JANDXE010000027.1 Genbank gene 24545 24619 . + . ID=gene-NND05_12115;Name=NND05_12115;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12115 JANDXE010000027.1 tRNAscan-SE tRNA 24545 24619 . + . ID=rna-NND05_12115;Parent=gene-NND05_12115;anticodon=(pos:24580..24582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12115;product=tRNA-Val JANDXE010000027.1 tRNAscan-SE exon 24545 24619 . + . ID=exon-NND05_12115-1;Parent=rna-NND05_12115;anticodon=(pos:24580..24582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12115;product=tRNA-Val JANDXE010000027.1 Genbank gene 24672 24749 . + . ID=gene-NND05_12120;Name=NND05_12120;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12120 JANDXE010000027.1 tRNAscan-SE tRNA 24672 24749 . + . ID=rna-NND05_12120;Parent=gene-NND05_12120;anticodon=(pos:24707..24709);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12120;product=tRNA-Val JANDXE010000027.1 tRNAscan-SE exon 24672 24749 . + . ID=exon-NND05_12120-1;Parent=rna-NND05_12120;anticodon=(pos:24707..24709);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12120;product=tRNA-Val JANDXE010000027.1 Genbank gene 24879 26225 . + . ID=gene-NND05_12125;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=NND05_12125 JANDXE010000027.1 Protein Homology CDS 24879 26225 . + 0 ID=cds-MCP9538274.1;Parent=gene-NND05_12125;Dbxref=NCBI_GP:MCP9538274.1;Name=MCP9538274.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004382269.1;locus_tag=NND05_12125;product=adenylosuccinate lyase;protein_id=MCP9538274.1;transl_table=11 JANDXE010000027.1 Genbank gene 26343 27839 . + . ID=gene-NND05_12130;Name=NND05_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12130 JANDXE010000027.1 Protein Homology CDS 26343 27839 . + 0 ID=cds-MCP9538275.1;Parent=gene-NND05_12130;Dbxref=NCBI_GP:MCP9538275.1;Name=MCP9538275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377392.1;locus_tag=NND05_12130;product=RNA-binding S4 domain-containing protein;protein_id=MCP9538275.1;transl_table=11 JANDXE010000027.1 Genbank gene 27906 29333 . + . ID=gene-NND05_12135;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=NND05_12135 JANDXE010000027.1 Protein Homology CDS 27906 29333 . + 0 ID=cds-MCP9538276.1;Parent=gene-NND05_12135;Dbxref=NCBI_GP:MCP9538276.1;Name=MCP9538276.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009230984.1;locus_tag=NND05_12135;product=asparagine--tRNA ligase;protein_id=MCP9538276.1;transl_table=11 JANDXE010000027.1 Genbank gene 29507 30592 . + . ID=gene-NND05_12140;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NND05_12140 JANDXE010000027.1 Protein Homology CDS 29507 30592 . + 0 ID=cds-MCP9538277.1;Parent=gene-NND05_12140;Dbxref=NCBI_GP:MCP9538277.1;Name=MCP9538277.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848325.1;locus_tag=NND05_12140;product=tryptophan--tRNA ligase;protein_id=MCP9538277.1;transl_table=11 JANDXE010000027.1 Genbank gene 30619 31905 . + . ID=gene-NND05_12145;Name=NND05_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12145 JANDXE010000027.1 Protein Homology CDS 30619 31905 . + 0 ID=cds-MCP9538278.1;Parent=gene-NND05_12145;Dbxref=NCBI_GP:MCP9538278.1;Name=MCP9538278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009161622.1;locus_tag=NND05_12145;product=MATE family efflux transporter;protein_id=MCP9538278.1;transl_table=11 JANDXE010000027.1 Genbank gene 32103 32282 . + . ID=gene-NND05_12150;Name=NND05_12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12150 JANDXE010000027.1 Protein Homology CDS 32103 32282 . + 0 ID=cds-MCP9538279.1;Parent=gene-NND05_12150;Dbxref=NCBI_GP:MCP9538279.1;Name=MCP9538279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341293.1;locus_tag=NND05_12150;product=tetratricopeptide repeat protein;protein_id=MCP9538279.1;transl_table=11 JANDXE010000027.1 Genbank gene 32360 32590 . + . ID=gene-NND05_12155;Name=NND05_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12155 JANDXE010000027.1 Protein Homology CDS 32360 32590 . + 0 ID=cds-MCP9538280.1;Parent=gene-NND05_12155;Dbxref=NCBI_GP:MCP9538280.1;Name=MCP9538280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368196.1;locus_tag=NND05_12155;product=4Fe-4S binding protein;protein_id=MCP9538280.1;transl_table=11 JANDXE010000027.1 Genbank gene 32594 33676 . + . ID=gene-NND05_12160;Name=NND05_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12160 JANDXE010000027.1 Protein Homology CDS 32594 33676 . + 0 ID=cds-MCP9538281.1;Parent=gene-NND05_12160;Dbxref=NCBI_GP:MCP9538281.1;Name=MCP9538281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012057.1;locus_tag=NND05_12160;product=3-methyl-2-oxobutanoate dehydrogenase subunit VorB;protein_id=MCP9538281.1;transl_table=11 JANDXE010000027.1 Genbank gene 33673 34437 . + . ID=gene-NND05_12165;Name=NND05_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12165 JANDXE010000027.1 Protein Homology CDS 33673 34437 . + 0 ID=cds-MCP9538282.1;Parent=gene-NND05_12165;Dbxref=NCBI_GP:MCP9538282.1;Name=MCP9538282.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848320.1;locus_tag=NND05_12165;product=thiamine pyrophosphate-dependent enzyme;protein_id=MCP9538282.1;transl_table=11 JANDXE010000027.1 Genbank gene 34443 34991 . + . ID=gene-NND05_12170;Name=NND05_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12170 JANDXE010000027.1 Protein Homology CDS 34443 34991 . + 0 ID=cds-MCP9538283.1;Parent=gene-NND05_12170;Dbxref=NCBI_GP:MCP9538283.1;Name=MCP9538283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341300.1;locus_tag=NND05_12170;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=MCP9538283.1;transl_table=11 JANDXE010000027.1 Genbank gene 35072 37081 . + . ID=gene-NND05_12175;Name=NND05_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12175 JANDXE010000027.1 Protein Homology CDS 35072 37081 . + 0 ID=cds-MCP9538284.1;Parent=gene-NND05_12175;Dbxref=NCBI_GP:MCP9538284.1;Name=MCP9538284.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898154.1;locus_tag=NND05_12175;product=family 20 glycosylhydrolase;protein_id=MCP9538284.1;transl_table=11 JANDXE010000027.1 Genbank gene 37124 37327 . + . ID=gene-NND05_12180;Name=NND05_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12180 JANDXE010000027.1 GeneMarkS-2+ CDS 37124 37327 . + 0 ID=cds-MCP9538285.1;Parent=gene-NND05_12180;Dbxref=NCBI_GP:MCP9538285.1;Name=MCP9538285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12180;product=hypothetical protein;protein_id=MCP9538285.1;transl_table=11 JANDXE010000027.1 Genbank gene 37337 37480 . + . ID=gene-NND05_12185;Name=NND05_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12185 JANDXE010000027.1 GeneMarkS-2+ CDS 37337 37480 . + 0 ID=cds-MCP9538286.1;Parent=gene-NND05_12185;Dbxref=NCBI_GP:MCP9538286.1;Name=MCP9538286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12185;product=hypothetical protein;protein_id=MCP9538286.1;transl_table=11 JANDXE010000027.1 Genbank gene 38326 38535 . + . ID=gene-NND05_12190;Name=NND05_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12190 JANDXE010000027.1 GeneMarkS-2+ CDS 38326 38535 . + 0 ID=cds-MCP9538287.1;Parent=gene-NND05_12190;Dbxref=NCBI_GP:MCP9538287.1;Name=MCP9538287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12190;product=hypothetical protein;protein_id=MCP9538287.1;transl_table=11 JANDXE010000027.1 Genbank gene 39148 39909 . + . ID=gene-NND05_12195;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=NND05_12195 JANDXE010000027.1 Protein Homology CDS 39148 39909 . + 0 ID=cds-MCP9538288.1;Parent=gene-NND05_12195;Dbxref=NCBI_GP:MCP9538288.1;Name=MCP9538288.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847915.1;locus_tag=NND05_12195;product=hydroxyethylthiazole kinase;protein_id=MCP9538288.1;transl_table=11 JANDXE010000027.1 Genbank gene 40350 40676 . + . ID=gene-NND05_12200;Name=NND05_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12200 JANDXE010000027.1 GeneMarkS-2+ CDS 40350 40676 . + 0 ID=cds-MCP9538289.1;Parent=gene-NND05_12200;Dbxref=NCBI_GP:MCP9538289.1;Name=MCP9538289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12200;product=hypothetical protein;protein_id=MCP9538289.1;transl_table=11 JANDXE010000027.1 Genbank gene 40820 41299 . - . ID=gene-NND05_12205;Name=NND05_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12205 JANDXE010000027.1 Protein Homology CDS 40820 41299 . - 0 ID=cds-MCP9538290.1;Parent=gene-NND05_12205;Dbxref=NCBI_GP:MCP9538290.1;Name=MCP9538290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006745600.1;locus_tag=NND05_12205;product=DUF4186 domain-containing protein;protein_id=MCP9538290.1;transl_table=11 JANDXE010000027.1 Genbank gene 41601 42365 . + . ID=gene-NND05_12210;Name=NND05_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12210 JANDXE010000027.1 Protein Homology CDS 41601 42365 . + 0 ID=cds-MCP9538291.1;Parent=gene-NND05_12210;Dbxref=NCBI_GP:MCP9538291.1;Name=MCP9538291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920645.1;locus_tag=NND05_12210;product=YaaA family protein;protein_id=MCP9538291.1;transl_table=11 JANDXE010000027.1 Genbank gene 42743 43381 . + . ID=gene-NND05_12215;Name=NND05_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12215 JANDXE010000027.1 Protein Homology CDS 42743 43381 . + 0 ID=cds-MCP9538292.1;Parent=gene-NND05_12215;Dbxref=NCBI_GP:MCP9538292.1;Name=MCP9538292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_12215;product=hypothetical protein;protein_id=MCP9538292.1;transl_table=11 JANDXE010000027.1 Genbank gene 43469 43750 . + . ID=gene-NND05_12220;Name=NND05_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12220 JANDXE010000027.1 GeneMarkS-2+ CDS 43469 43750 . + 0 ID=cds-MCP9538293.1;Parent=gene-NND05_12220;Dbxref=NCBI_GP:MCP9538293.1;Name=MCP9538293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12220;product=hypothetical protein;protein_id=MCP9538293.1;transl_table=11 JANDXE010000027.1 Genbank gene 43826 44095 . + . ID=gene-NND05_12225;Name=NND05_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12225 JANDXE010000027.1 Protein Homology CDS 43826 44095 . + 0 ID=cds-MCP9538294.1;Parent=gene-NND05_12225;Dbxref=NCBI_GP:MCP9538294.1;Name=MCP9538294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009348354.1;locus_tag=NND05_12225;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9538294.1;transl_table=11 JANDXE010000027.1 Genbank gene 44125 44346 . + . ID=gene-NND05_12230;Name=NND05_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12230 JANDXE010000027.1 Protein Homology CDS 44125 44346 . + 0 ID=cds-MCP9538295.1;Parent=gene-NND05_12230;Dbxref=NCBI_GP:MCP9538295.1;Name=MCP9538295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342320.1;locus_tag=NND05_12230;product=dephospho-CoA kinase;protein_id=MCP9538295.1;transl_table=11 ##sequence-region JANDXE010000028.1 1 44010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000028.1 Genbank region 1 44010 . + . ID=JANDXE010000028.1:1..44010;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000028.1 Genbank gene 793 1455 . + . ID=gene-NND05_12235;Name=NND05_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12235 JANDXE010000028.1 Protein Homology CDS 793 1455 . + 0 ID=cds-MCP9538296.1;Parent=gene-NND05_12235;Dbxref=NCBI_GP:MCP9538296.1;Name=MCP9538296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846249.1;locus_tag=NND05_12235;product=DNA-binding protein;protein_id=MCP9538296.1;transl_table=11 JANDXE010000028.1 Genbank gene 1483 1587 . + . ID=gene-NND05_12240;Name=NND05_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12240 JANDXE010000028.1 Protein Homology CDS 1483 1587 . + 0 ID=cds-MCP9538297.1;Parent=gene-NND05_12240;Dbxref=NCBI_GP:MCP9538297.1;Name=MCP9538297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_12240;product=smalltalk protein;protein_id=MCP9538297.1;transl_table=11 JANDXE010000028.1 Genbank gene 1641 2066 . + . ID=gene-NND05_12245;Name=NND05_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12245 JANDXE010000028.1 Protein Homology CDS 1641 2066 . + 0 ID=cds-MCP9538298.1;Parent=gene-NND05_12245;Dbxref=NCBI_GP:MCP9538298.1;Name=MCP9538298.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846248.1;locus_tag=NND05_12245;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9538298.1;transl_table=11 JANDXE010000028.1 Genbank gene 2247 2390 . + . ID=gene-NND05_12250;Name=NND05_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12250 JANDXE010000028.1 GeneMarkS-2+ CDS 2247 2390 . + 0 ID=cds-MCP9538299.1;Parent=gene-NND05_12250;Dbxref=NCBI_GP:MCP9538299.1;Name=MCP9538299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12250;product=hypothetical protein;protein_id=MCP9538299.1;transl_table=11 JANDXE010000028.1 Genbank gene 2650 3546 . - . ID=gene-NND05_12255;Name=NND05_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12255 JANDXE010000028.1 Protein Homology CDS 2650 3546 . - 0 ID=cds-MCP9538300.1;Parent=gene-NND05_12255;Dbxref=NCBI_GP:MCP9538300.1;Name=MCP9538300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847040.1;locus_tag=NND05_12255;product=YitT family protein;protein_id=MCP9538300.1;transl_table=11 JANDXE010000028.1 Genbank gene 3586 3771 . - . ID=gene-NND05_12260;Name=NND05_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12260 JANDXE010000028.1 Protein Homology CDS 3586 3771 . - 0 ID=cds-MCP9538301.1;Parent=gene-NND05_12260;Dbxref=NCBI_GP:MCP9538301.1;Name=MCP9538301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847041.1;locus_tag=NND05_12260;product=DUF4250 domain-containing protein;protein_id=MCP9538301.1;transl_table=11 JANDXE010000028.1 Genbank gene 3909 5360 . - . ID=gene-NND05_12265;Name=NND05_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12265 JANDXE010000028.1 Protein Homology CDS 3909 5360 . - 0 ID=cds-MCP9538302.1;Parent=gene-NND05_12265;Dbxref=NCBI_GP:MCP9538302.1;Name=MCP9538302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846353.1;locus_tag=NND05_12265;product=NADH-quinone oxidoreductase subunit N;protein_id=MCP9538302.1;transl_table=11 JANDXE010000028.1 Genbank gene 5376 6875 . - . ID=gene-NND05_12270;Name=NND05_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12270 JANDXE010000028.1 Protein Homology CDS 5376 6875 . - 0 ID=cds-MCP9538303.1;Parent=gene-NND05_12270;Dbxref=NCBI_GP:MCP9538303.1;Name=MCP9538303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846354.1;locus_tag=NND05_12270;product=NADH-quinone oxidoreductase subunit M;protein_id=MCP9538303.1;transl_table=11 JANDXE010000028.1 Genbank gene 6909 8864 . - . ID=gene-NND05_12275;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=NND05_12275 JANDXE010000028.1 Protein Homology CDS 6909 8864 . - 0 ID=cds-MCP9538304.1;Parent=gene-NND05_12275;Dbxref=NCBI_GP:MCP9538304.1;Name=MCP9538304.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846355.1;locus_tag=NND05_12275;product=NADH-quinone oxidoreductase subunit L;protein_id=MCP9538304.1;transl_table=11 JANDXE010000028.1 Genbank gene 8871 9179 . - . ID=gene-NND05_12280;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=NND05_12280 JANDXE010000028.1 Protein Homology CDS 8871 9179 . - 0 ID=cds-MCP9538305.1;Parent=gene-NND05_12280;Dbxref=NCBI_GP:MCP9538305.1;Name=MCP9538305.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282427.1;locus_tag=NND05_12280;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=MCP9538305.1;transl_table=11 JANDXE010000028.1 Genbank gene 9176 9703 . - . ID=gene-NND05_12285;Name=NND05_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12285 JANDXE010000028.1 Protein Homology CDS 9176 9703 . - 0 ID=cds-MCP9538306.1;Parent=gene-NND05_12285;Dbxref=NCBI_GP:MCP9538306.1;Name=MCP9538306.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846357.1;locus_tag=NND05_12285;product=NADH-quinone oxidoreductase subunit J;protein_id=MCP9538306.1;transl_table=11 JANDXE010000028.1 Genbank gene 9719 10249 . - . ID=gene-NND05_12290;Name=NND05_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12290 JANDXE010000028.1 Protein Homology CDS 9719 10249 . - 0 ID=cds-MCP9538307.1;Parent=gene-NND05_12290;Dbxref=NCBI_GP:MCP9538307.1;Name=MCP9538307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133979.1;locus_tag=NND05_12290;product=NADH-quinone oxidoreductase subunit I;protein_id=MCP9538307.1;transl_table=11 JANDXE010000028.1 Genbank gene 10284 11369 . - . ID=gene-NND05_12295;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=NND05_12295 JANDXE010000028.1 Protein Homology CDS 10284 11369 . - 0 ID=cds-MCP9538308.1;Parent=gene-NND05_12295;Dbxref=NCBI_GP:MCP9538308.1;Name=MCP9538308.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348636.1;locus_tag=NND05_12295;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=MCP9538308.1;transl_table=11 JANDXE010000028.1 Genbank gene 11372 12943 . - . ID=gene-NND05_12300;Name=NND05_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12300 JANDXE010000028.1 Protein Homology CDS 11372 12943 . - 0 ID=cds-MCP9538309.1;Parent=gene-NND05_12300;Dbxref=NCBI_GP:MCP9538309.1;Name=MCP9538309.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909705.1;locus_tag=NND05_12300;product=NADH-quinone oxidoreductase subunit C;protein_id=MCP9538309.1;transl_table=11 JANDXE010000028.1 Genbank gene 12963 13688 . - . ID=gene-NND05_12305;Name=NND05_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12305 JANDXE010000028.1 Protein Homology CDS 12963 13688 . - 0 ID=cds-MCP9538310.1;Parent=gene-NND05_12305;Dbxref=NCBI_GP:MCP9538310.1;Name=MCP9538310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967600.1;locus_tag=NND05_12305;product=NADH-quinone oxidoreductase subunit B;protein_id=MCP9538310.1;transl_table=11 JANDXE010000028.1 Genbank gene 13679 14029 . - . ID=gene-NND05_12310;Name=NND05_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12310 JANDXE010000028.1 Protein Homology CDS 13679 14029 . - 0 ID=cds-MCP9538311.1;Parent=gene-NND05_12310;Dbxref=NCBI_GP:MCP9538311.1;Name=MCP9538311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282433.1;locus_tag=NND05_12310;product=NADH-quinone oxidoreductase subunit A;protein_id=MCP9538311.1;transl_table=11 JANDXE010000028.1 Genbank gene 14256 14870 . - . ID=gene-NND05_12315;Name=NND05_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12315 JANDXE010000028.1 Protein Homology CDS 14256 14870 . - 0 ID=cds-MCP9538312.1;Parent=gene-NND05_12315;Dbxref=NCBI_GP:MCP9538312.1;Name=MCP9538312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134449.1;locus_tag=NND05_12315;product=deoxynucleoside kinase;protein_id=MCP9538312.1;transl_table=11 JANDXE010000028.1 Genbank gene 14970 15596 . - . ID=gene-NND05_12320;Name=NND05_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12320 JANDXE010000028.1 Protein Homology CDS 14970 15596 . - 0 ID=cds-MCP9538313.1;Parent=gene-NND05_12320;Dbxref=NCBI_GP:MCP9538313.1;Name=MCP9538313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368959.1;locus_tag=NND05_12320;product=deoxynucleoside kinase;protein_id=MCP9538313.1;transl_table=11 JANDXE010000028.1 Genbank gene 15819 17000 . - . ID=gene-NND05_12325;Name=NND05_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12325 JANDXE010000028.1 Protein Homology CDS 15819 17000 . - 0 ID=cds-MCP9538314.1;Parent=gene-NND05_12325;Dbxref=NCBI_GP:MCP9538314.1;Name=MCP9538314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463925.1;locus_tag=NND05_12325;product=AGE family epimerase/isomerase;protein_id=MCP9538314.1;transl_table=11 JANDXE010000028.1 Genbank gene 17005 18348 . - . ID=gene-NND05_12330;Name=NND05_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12330 JANDXE010000028.1 Protein Homology CDS 17005 18348 . - 0 ID=cds-MCP9538315.1;Parent=gene-NND05_12330;Dbxref=NCBI_GP:MCP9538315.1;Name=MCP9538315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846367.1;locus_tag=NND05_12330;product=MFS transporter;protein_id=MCP9538315.1;transl_table=11 JANDXE010000028.1 Genbank gene 18467 19639 . - . ID=gene-NND05_12335;Name=NND05_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12335 JANDXE010000028.1 Protein Homology CDS 18467 19639 . - 0 ID=cds-MCP9538316.1;Parent=gene-NND05_12335;Dbxref=NCBI_GP:MCP9538316.1;Name=MCP9538316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342209.1;locus_tag=NND05_12335;product=glycosidase;protein_id=MCP9538316.1;transl_table=11 JANDXE010000028.1 Genbank gene 19744 20904 . - . ID=gene-NND05_12340;Name=NND05_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12340 JANDXE010000028.1 Protein Homology CDS 19744 20904 . - 0 ID=cds-MCP9538317.1;Parent=gene-NND05_12340;Dbxref=NCBI_GP:MCP9538317.1;Name=MCP9538317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342210.1;locus_tag=NND05_12340;product=glycoside hydrolase family 26 protein;protein_id=MCP9538317.1;transl_table=11 JANDXE010000028.1 Genbank gene 20909 22237 . - . ID=gene-NND05_12345;Name=NND05_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12345 JANDXE010000028.1 Protein Homology CDS 20909 22237 . - 0 ID=cds-MCP9538318.1;Parent=gene-NND05_12345;Dbxref=NCBI_GP:MCP9538318.1;Name=MCP9538318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005834805.1;locus_tag=NND05_12345;product=acetylxylan esterase;protein_id=MCP9538318.1;transl_table=11 JANDXE010000028.1 Genbank gene 22524 23474 . - . ID=gene-NND05_12350;Name=NND05_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12350 JANDXE010000028.1 Protein Homology CDS 22524 23474 . - 0 ID=cds-MCP9538319.1;Parent=gene-NND05_12350;Dbxref=NCBI_GP:MCP9538319.1;Name=MCP9538319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822631.1;locus_tag=NND05_12350;product=ATPase;protein_id=MCP9538319.1;transl_table=11 JANDXE010000028.1 Genbank gene 23670 24419 . + . ID=gene-NND05_12355;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=NND05_12355 JANDXE010000028.1 Protein Homology CDS 23670 24419 . + 0 ID=cds-MCP9538320.1;Parent=gene-NND05_12355;Dbxref=NCBI_GP:MCP9538320.1;Name=MCP9538320.1;Ontology_term=GO:0019294,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=keto-3-deoxy-D-manno-octulosonic acid biosynthetic process|0019294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846385.1;locus_tag=NND05_12355;product=3-deoxy-8-phosphooctulonate synthase;protein_id=MCP9538320.1;transl_table=11 JANDXE010000028.1 Genbank gene 24472 25431 . + . ID=gene-NND05_12360;Name=NND05_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12360 JANDXE010000028.1 Protein Homology CDS 24472 25431 . + 0 ID=cds-MCP9538321.1;Parent=gene-NND05_12360;Dbxref=NCBI_GP:MCP9538321.1;Name=MCP9538321.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009161654.1;locus_tag=NND05_12360;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=MCP9538321.1;transl_table=11 JANDXE010000028.1 Genbank gene 25437 26708 . + . ID=gene-NND05_12365;Name=NND05_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12365 JANDXE010000028.1 Protein Homology CDS 25437 26708 . + 0 ID=cds-MCP9538322.1;Parent=gene-NND05_12365;Dbxref=NCBI_GP:MCP9538322.1;Name=MCP9538322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282438.1;locus_tag=NND05_12365;product=phospholipase D-like domain-containing protein;protein_id=MCP9538322.1;transl_table=11 JANDXE010000028.1 Genbank gene 26733 27368 . + . ID=gene-NND05_12370;Name=NND05_12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12370 JANDXE010000028.1 Protein Homology CDS 26733 27368 . + 0 ID=cds-MCP9538323.1;Parent=gene-NND05_12370;Dbxref=NCBI_GP:MCP9538323.1;Name=MCP9538323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909696.1;locus_tag=NND05_12370;product=response regulator transcription factor;protein_id=MCP9538323.1;transl_table=11 JANDXE010000028.1 Genbank gene 27511 28467 . - . ID=gene-NND05_12375;Name=NND05_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12375 JANDXE010000028.1 Protein Homology CDS 27511 28467 . - 0 ID=cds-MCP9538324.1;Parent=gene-NND05_12375;Dbxref=NCBI_GP:MCP9538324.1;Name=MCP9538324.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370588.1;locus_tag=NND05_12375;product=LuxR C-terminal-related transcriptional regulator;protein_id=MCP9538324.1;transl_table=11 JANDXE010000028.1 Genbank gene 28825 30126 . + . ID=gene-NND05_12380;Name=NND05_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12380 JANDXE010000028.1 Protein Homology CDS 28825 30126 . + 0 ID=cds-MCP9538325.1;Parent=gene-NND05_12380;Dbxref=NCBI_GP:MCP9538325.1;Name=MCP9538325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354810.1;locus_tag=NND05_12380;product=hypothetical protein;protein_id=MCP9538325.1;transl_table=11 JANDXE010000028.1 Genbank gene 30200 31453 . + . ID=gene-NND05_12385;Name=NND05_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12385 JANDXE010000028.1 Protein Homology CDS 30200 31453 . + 0 ID=cds-MCP9538326.1;Parent=gene-NND05_12385;Dbxref=NCBI_GP:MCP9538326.1;Name=MCP9538326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354779.1;locus_tag=NND05_12385;product=imelysin;protein_id=MCP9538326.1;transl_table=11 JANDXE010000028.1 Genbank gene 31584 33317 . + . ID=gene-NND05_12390;Name=NND05_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12390 JANDXE010000028.1 Protein Homology CDS 31584 33317 . + 0 ID=cds-MCP9538327.1;Parent=gene-NND05_12390;Dbxref=NCBI_GP:MCP9538327.1;Name=MCP9538327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343149.1;locus_tag=NND05_12390;product=hypothetical protein;protein_id=MCP9538327.1;transl_table=11 JANDXE010000028.1 Genbank gene 33479 35743 . + . ID=gene-NND05_12395;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=NND05_12395 JANDXE010000028.1 Protein Homology CDS 33479 35743 . + 0 ID=cds-MCP9538328.1;Parent=gene-NND05_12395;Dbxref=NCBI_GP:MCP9538328.1;Name=MCP9538328.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411734.1;locus_tag=NND05_12395;product=cytochrome c biogenesis protein CcsA;protein_id=MCP9538328.1;transl_table=11 JANDXE010000028.1 Genbank gene 35834 36232 . + . ID=gene-NND05_12400;Name=NND05_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12400 JANDXE010000028.1 Protein Homology CDS 35834 36232 . + 0 ID=cds-MCP9538329.1;Parent=gene-NND05_12400;Dbxref=NCBI_GP:MCP9538329.1;Name=MCP9538329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898164.1;locus_tag=NND05_12400;product=C-GCAxxG-C-C family protein;protein_id=MCP9538329.1;transl_table=11 JANDXE010000028.1 Genbank gene 36239 36430 . + . ID=gene-NND05_12405;Name=NND05_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12405 JANDXE010000028.1 Protein Homology CDS 36239 36430 . + 0 ID=cds-MCP9538330.1;Parent=gene-NND05_12405;Dbxref=NCBI_GP:MCP9538330.1;Name=MCP9538330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026048.2;locus_tag=NND05_12405;product=4Fe-4S binding protein;protein_id=MCP9538330.1;transl_table=11 JANDXE010000028.1 Genbank gene 36449 36799 . + . ID=gene-NND05_12410;Name=NND05_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12410 JANDXE010000028.1 Protein Homology CDS 36449 36799 . + 0 ID=cds-MCP9538331.1;Parent=gene-NND05_12410;Dbxref=NCBI_GP:MCP9538331.1;Name=MCP9538331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281385.1;locus_tag=NND05_12410;product=hypothetical protein;protein_id=MCP9538331.1;transl_table=11 JANDXE010000028.1 Genbank gene 36835 37761 . + . ID=gene-NND05_12415;Name=NND05_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12415 JANDXE010000028.1 Protein Homology CDS 36835 37761 . + 0 ID=cds-MCP9538332.1;Parent=gene-NND05_12415;Dbxref=NCBI_GP:MCP9538332.1;Name=MCP9538332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897768.1;locus_tag=NND05_12415;product=LysR substrate-binding domain-containing protein;protein_id=MCP9538332.1;transl_table=11 JANDXE010000028.1 Genbank gene 37788 38780 . - . ID=gene-NND05_12420;Name=NND05_12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12420 JANDXE010000028.1 Protein Homology CDS 37788 38780 . - 0 ID=cds-MCP9538333.1;Parent=gene-NND05_12420;Dbxref=NCBI_GP:MCP9538333.1;Name=MCP9538333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007558942.1;locus_tag=NND05_12420;product=PD-(D/E)XK nuclease family transposase;protein_id=MCP9538333.1;transl_table=11 JANDXE010000028.1 Genbank gene 39106 39402 . + . ID=gene-NND05_12425;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NND05_12425 JANDXE010000028.1 Protein Homology CDS 39106 39402 . + 0 ID=cds-MCP9538334.1;Parent=gene-NND05_12425;Dbxref=NCBI_GP:MCP9538334.1;Name=MCP9538334.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008862110.1;locus_tag=NND05_12425;product=thioredoxin;protein_id=MCP9538334.1;transl_table=11 JANDXE010000028.1 Genbank gene 39582 41225 . + . ID=gene-NND05_12430;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=NND05_12430 JANDXE010000028.1 Protein Homology CDS 39582 41225 . + 0 ID=cds-MCP9538335.1;Parent=gene-NND05_12430;Dbxref=NCBI_GP:MCP9538335.1;Name=MCP9538335.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004382134.1;locus_tag=NND05_12430;product=hydroxylamine reductase;protein_id=MCP9538335.1;transl_table=11 JANDXE010000028.1 Genbank gene 41259 41786 . + . ID=gene-NND05_12435;Name=NND05_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12435 JANDXE010000028.1 Protein Homology CDS 41259 41786 . + 0 ID=cds-MCP9538336.1;Parent=gene-NND05_12435;Dbxref=NCBI_GP:MCP9538336.1;Name=MCP9538336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013936.2;locus_tag=NND05_12435;product=hemerythrin domain-containing protein;protein_id=MCP9538336.1;transl_table=11 JANDXE010000028.1 Genbank gene 41885 42841 . - . ID=gene-NND05_12440;Name=NND05_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12440 JANDXE010000028.1 Protein Homology CDS 41885 42841 . - 0 ID=cds-MCP9538337.1;Parent=gene-NND05_12440;Dbxref=NCBI_GP:MCP9538337.1;Name=MCP9538337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008142402.1;locus_tag=NND05_12440;product=PD-(D/E)XK nuclease family transposase;protein_id=MCP9538337.1;transl_table=11 JANDXE010000028.1 Genbank gene 43053 43721 . + . ID=gene-NND05_12445;Name=NND05_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12445 JANDXE010000028.1 Protein Homology CDS 43053 43721 . + 0 ID=cds-MCP9538338.1;Parent=gene-NND05_12445;Dbxref=NCBI_GP:MCP9538338.1;Name=MCP9538338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709981.1;locus_tag=NND05_12445;product=Crp/Fnr family transcriptional regulator;protein_id=MCP9538338.1;transl_table=11 JANDXE010000028.1 Genbank gene 43865 43993 . - . ID=gene-NND05_12450;Name=NND05_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12450 JANDXE010000028.1 Protein Homology CDS 43865 43993 . - 0 ID=cds-MCP9538339.1;Parent=gene-NND05_12450;Dbxref=NCBI_GP:MCP9538339.1;Name=MCP9538339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_12450;product=DUF4248 domain-containing protein;protein_id=MCP9538339.1;transl_table=11 ##sequence-region JANDXE010000029.1 1 38539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000029.1 Genbank region 1 38539 . + . ID=JANDXE010000029.1:1..38539;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000029.1 Genbank gene 162 1304 . + . ID=gene-NND05_12455;Name=NND05_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12455 JANDXE010000029.1 Protein Homology CDS 162 1304 . + 0 ID=cds-MCP9538340.1;Parent=gene-NND05_12455;Dbxref=NCBI_GP:MCP9538340.1;Name=MCP9538340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272186.1;locus_tag=NND05_12455;product=DUF5906 domain-containing protein;protein_id=MCP9538340.1;transl_table=11 JANDXE010000029.1 Genbank gene 1581 2531 . + . ID=gene-NND05_12460;Name=NND05_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12460 JANDXE010000029.1 Protein Homology CDS 1581 2531 . + 0 ID=cds-MCP9538341.1;Parent=gene-NND05_12460;Dbxref=NCBI_GP:MCP9538341.1;Name=MCP9538341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018150.1;locus_tag=NND05_12460;product=toprim domain-containing protein;protein_id=MCP9538341.1;transl_table=11 JANDXE010000029.1 Genbank gene 2722 4068 . + . ID=gene-NND05_12465;Name=NND05_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12465 JANDXE010000029.1 Protein Homology CDS 2722 4068 . + 0 ID=cds-MCP9538342.1;Parent=gene-NND05_12465;Dbxref=NCBI_GP:MCP9538342.1;Name=MCP9538342.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018151.1;locus_tag=NND05_12465;product=plasmid recombination protein;protein_id=MCP9538342.1;transl_table=11 JANDXE010000029.1 Genbank gene 4153 4644 . - . ID=gene-NND05_12470;Name=NND05_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12470 JANDXE010000029.1 GeneMarkS-2+ CDS 4153 4644 . - 0 ID=cds-MCP9538343.1;Parent=gene-NND05_12470;Dbxref=NCBI_GP:MCP9538343.1;Name=MCP9538343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12470;product=hypothetical protein;protein_id=MCP9538343.1;transl_table=11 JANDXE010000029.1 Genbank gene 5160 5573 . + . ID=gene-NND05_12475;Name=NND05_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12475 JANDXE010000029.1 Protein Homology CDS 5160 5573 . + 0 ID=cds-MCP9538344.1;Parent=gene-NND05_12475;Dbxref=NCBI_GP:MCP9538344.1;Name=MCP9538344.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=NND05_12475;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538344.1;transl_table=11 JANDXE010000029.1 Genbank gene 5861 6982 . + . ID=gene-NND05_12480;Name=NND05_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12480 JANDXE010000029.1 Protein Homology CDS 5861 6982 . + 0 ID=cds-MCP9538345.1;Parent=gene-NND05_12480;Dbxref=NCBI_GP:MCP9538345.1;Name=MCP9538345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846442.1;locus_tag=NND05_12480;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538345.1;transl_table=11 JANDXE010000029.1 Genbank gene 7911 8144 . + . ID=gene-NND05_12485;Name=NND05_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12485 JANDXE010000029.1 GeneMarkS-2+ CDS 7911 8144 . + 0 ID=cds-MCP9538346.1;Parent=gene-NND05_12485;Dbxref=NCBI_GP:MCP9538346.1;Name=MCP9538346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12485;product=hypothetical protein;protein_id=MCP9538346.1;transl_table=11 JANDXE010000029.1 Genbank gene 8144 8431 . + . ID=gene-NND05_12490;Name=NND05_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12490 JANDXE010000029.1 Protein Homology CDS 8144 8431 . + 0 ID=cds-MCP9538347.1;Parent=gene-NND05_12490;Dbxref=NCBI_GP:MCP9538347.1;Name=MCP9538347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845119.1;locus_tag=NND05_12490;product=type II toxin-antitoxin system YafQ family toxin;protein_id=MCP9538347.1;transl_table=11 JANDXE010000029.1 Genbank gene 8861 11275 . - . ID=gene-NND05_12495;Name=NND05_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12495 JANDXE010000029.1 Protein Homology CDS 8861 11275 . - 0 ID=cds-MCP9538348.1;Parent=gene-NND05_12495;Dbxref=NCBI_GP:MCP9538348.1;Name=MCP9538348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024405.2;locus_tag=NND05_12495;product=hypothetical protein;protein_id=MCP9538348.1;transl_table=11 JANDXE010000029.1 Genbank gene 11293 14175 . - . ID=gene-NND05_12500;Name=NND05_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12500 JANDXE010000029.1 GeneMarkS-2+ CDS 11293 14175 . - 0 ID=cds-MCP9538349.1;Parent=gene-NND05_12500;Dbxref=NCBI_GP:MCP9538349.1;Name=MCP9538349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12500;product=hypothetical protein;protein_id=MCP9538349.1;transl_table=11 JANDXE010000029.1 Genbank gene 14237 15364 . - . ID=gene-NND05_12505;Name=NND05_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12505 JANDXE010000029.1 Protein Homology CDS 14237 15364 . - 0 ID=cds-MCP9538350.1;Parent=gene-NND05_12505;Dbxref=NCBI_GP:MCP9538350.1;Name=MCP9538350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020418.2;locus_tag=NND05_12505;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9538350.1;transl_table=11 JANDXE010000029.1 Genbank gene 15508 16821 . - . ID=gene-NND05_12510;Name=NND05_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12510 JANDXE010000029.1 Protein Homology CDS 15508 16821 . - 0 ID=cds-MCP9538351.1;Parent=gene-NND05_12510;Dbxref=NCBI_GP:MCP9538351.1;Name=MCP9538351.1;Note=Members of this family are fimbrial shaft proteins (major subunit proteins)%2C found in the Bacteriodetes. The family is named for Mfa1 from Porphyromonas gingivalis%2C and is related to but distinct from the family of FimA from the species.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038041.1;locus_tag=NND05_12510;product=Mfa1 family fimbria major subunit;protein_id=MCP9538351.1;transl_table=11 JANDXE010000029.1 Genbank gene 16870 17220 . - . ID=gene-NND05_12515;Name=NND05_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12515 JANDXE010000029.1 GeneMarkS-2+ CDS 16870 17220 . - 0 ID=cds-MCP9538352.1;Parent=gene-NND05_12515;Dbxref=NCBI_GP:MCP9538352.1;Name=MCP9538352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12515;product=hypothetical protein;protein_id=MCP9538352.1;transl_table=11 JANDXE010000029.1 Genbank gene 17253 18611 . - . ID=gene-NND05_12520;Name=NND05_12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12520 JANDXE010000029.1 Protein Homology CDS 17253 18611 . - 0 ID=cds-MCP9538353.1;Parent=gene-NND05_12520;Dbxref=NCBI_GP:MCP9538353.1;Name=MCP9538353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024386.2;locus_tag=NND05_12520;product=DUF3868 domain-containing protein;protein_id=MCP9538353.1;transl_table=11 JANDXE010000029.1 Genbank gene 18671 19216 . - . ID=gene-NND05_12525;Name=NND05_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12525 JANDXE010000029.1 Protein Homology CDS 18671 19216 . - 0 ID=cds-MCP9538354.1;Parent=gene-NND05_12525;Dbxref=NCBI_GP:MCP9538354.1;Name=MCP9538354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006745252.1;locus_tag=NND05_12525;product=DUF3575 domain-containing protein;protein_id=MCP9538354.1;transl_table=11 JANDXE010000029.1 Genbank gene 19556 21304 . - . ID=gene-NND05_12530;Name=NND05_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12530 JANDXE010000029.1 Protein Homology CDS 19556 21304 . - 0 ID=cds-MCP9538355.1;Parent=gene-NND05_12530;Dbxref=NCBI_GP:MCP9538355.1;Name=MCP9538355.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015531.2;locus_tag=NND05_12530;product=S41 family peptidase;protein_id=MCP9538355.1;transl_table=11 JANDXE010000029.1 Genbank gene 21511 22224 . - . ID=gene-NND05_12535;Name=NND05_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12535 JANDXE010000029.1 Protein Homology CDS 21511 22224 . - 0 ID=cds-MCP9538356.1;Parent=gene-NND05_12535;Dbxref=NCBI_GP:MCP9538356.1;Name=MCP9538356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024957.2;locus_tag=NND05_12535;product=PorT family protein;protein_id=MCP9538356.1;transl_table=11 JANDXE010000029.1 Genbank gene 22256 22828 . - . ID=gene-NND05_12540;Name=NND05_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12540 JANDXE010000029.1 Protein Homology CDS 22256 22828 . - 0 ID=cds-MCP9538357.1;Parent=gene-NND05_12540;Dbxref=NCBI_GP:MCP9538357.1;Name=MCP9538357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410861.1;locus_tag=NND05_12540;product=chromate transporter;protein_id=MCP9538357.1;transl_table=11 JANDXE010000029.1 Genbank gene 22832 23383 . - . ID=gene-NND05_12545;Name=NND05_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12545 JANDXE010000029.1 Protein Homology CDS 22832 23383 . - 0 ID=cds-MCP9538358.1;Parent=gene-NND05_12545;Dbxref=NCBI_GP:MCP9538358.1;Name=MCP9538358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848525.1;locus_tag=NND05_12545;product=chromate transporter;protein_id=MCP9538358.1;transl_table=11 JANDXE010000029.1 Genbank gene 23411 27142 . - . ID=gene-NND05_12550;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=NND05_12550 JANDXE010000029.1 Protein Homology CDS 23411 27142 . - 0 ID=cds-MCP9538359.1;Parent=gene-NND05_12550;Dbxref=NCBI_GP:MCP9538359.1;Name=MCP9538359.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848524.1;locus_tag=NND05_12550;product=phosphoribosylformylglycinamidine synthase;protein_id=MCP9538359.1;transl_table=11 JANDXE010000029.1 Genbank gene 27491 28351 . + . ID=gene-NND05_12555;Name=NND05_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12555 JANDXE010000029.1 Protein Homology CDS 27491 28351 . + 0 ID=cds-MCP9538360.1;Parent=gene-NND05_12555;Dbxref=NCBI_GP:MCP9538360.1;Name=MCP9538360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844881.1;locus_tag=NND05_12555;product=OmpA family protein;protein_id=MCP9538360.1;transl_table=11 JANDXE010000029.1 Genbank gene 28458 29357 . + . ID=gene-NND05_12560;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NND05_12560 JANDXE010000029.1 Protein Homology CDS 28458 29357 . + 0 ID=cds-MCP9538361.1;Parent=gene-NND05_12560;Dbxref=NCBI_GP:MCP9538361.1;Name=MCP9538361.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:NF021981.2;locus_tag=NND05_12560;product=signal peptidase I;protein_id=MCP9538361.1;transl_table=11 JANDXE010000029.1 Genbank gene 29877 31910 . - . ID=gene-NND05_12565;Name=NND05_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12565 JANDXE010000029.1 GeneMarkS-2+ CDS 29877 31910 . - 0 ID=cds-MCP9538362.1;Parent=gene-NND05_12565;Dbxref=NCBI_GP:MCP9538362.1;Name=MCP9538362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12565;product=hypothetical protein;protein_id=MCP9538362.1;transl_table=11 JANDXE010000029.1 Genbank gene 32047 32511 . - . ID=gene-NND05_12570;Name=NND05_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12570 JANDXE010000029.1 GeneMarkS-2+ CDS 32047 32511 . - 0 ID=cds-MCP9538363.1;Parent=gene-NND05_12570;Dbxref=NCBI_GP:MCP9538363.1;Name=MCP9538363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12570;product=hypothetical protein;protein_id=MCP9538363.1;transl_table=11 JANDXE010000029.1 Genbank gene 32571 34505 . - . ID=gene-NND05_12575;Name=NND05_12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12575 JANDXE010000029.1 Protein Homology CDS 32571 34505 . - 0 ID=cds-MCP9538364.1;Parent=gene-NND05_12575;Dbxref=NCBI_GP:MCP9538364.1;Name=MCP9538364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942003.1;locus_tag=NND05_12575;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9538364.1;transl_table=11 JANDXE010000029.1 Genbank gene 34512 37649 . - . ID=gene-NND05_12580;Name=NND05_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12580 JANDXE010000029.1 Protein Homology CDS 34512 37649 . - 0 ID=cds-MCP9538365.1;Parent=gene-NND05_12580;Dbxref=NCBI_GP:MCP9538365.1;Name=MCP9538365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007136050.1;locus_tag=NND05_12580;product=TonB-dependent receptor;protein_id=MCP9538365.1;transl_table=11 JANDXE010000029.1 Genbank gene 37941 38084 . - . ID=gene-NND05_12585;Name=NND05_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12585 JANDXE010000029.1 GeneMarkS-2+ CDS 37941 38084 . - 0 ID=cds-MCP9538366.1;Parent=gene-NND05_12585;Dbxref=NCBI_GP:MCP9538366.1;Name=MCP9538366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12585;product=hypothetical protein;protein_id=MCP9538366.1;transl_table=11 ##sequence-region JANDXE010000030.1 1 37339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000030.1 Genbank region 1 37339 . + . ID=JANDXE010000030.1:1..37339;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000030.1 Genbank gene 311 392 . - . ID=gene-NND05_12590;Name=NND05_12590;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12590 JANDXE010000030.1 tRNAscan-SE tRNA 311 392 . - . ID=rna-NND05_12590;Parent=gene-NND05_12590;anticodon=(pos:complement(356..358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12590;product=tRNA-Leu JANDXE010000030.1 tRNAscan-SE exon 311 392 . - . ID=exon-NND05_12590-1;Parent=rna-NND05_12590;anticodon=(pos:complement(356..358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12590;product=tRNA-Leu JANDXE010000030.1 Genbank gene 443 524 . - . ID=gene-NND05_12595;Name=NND05_12595;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12595 JANDXE010000030.1 tRNAscan-SE tRNA 443 524 . - . ID=rna-NND05_12595;Parent=gene-NND05_12595;anticodon=(pos:complement(488..490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12595;product=tRNA-Leu JANDXE010000030.1 tRNAscan-SE exon 443 524 . - . ID=exon-NND05_12595-1;Parent=rna-NND05_12595;anticodon=(pos:complement(488..490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12595;product=tRNA-Leu JANDXE010000030.1 Genbank gene 736 1827 . + . ID=gene-NND05_12600;Name=NND05_12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12600 JANDXE010000030.1 Protein Homology CDS 736 1827 . + 0 ID=cds-MCP9538367.1;Parent=gene-NND05_12600;Dbxref=NCBI_GP:MCP9538367.1;Name=MCP9538367.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967818.1;locus_tag=NND05_12600;product=sugar phosphate nucleotidyltransferase;protein_id=MCP9538367.1;transl_table=11 JANDXE010000030.1 Genbank gene 1872 2273 . - . ID=gene-NND05_12605;Name=NND05_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12605 JANDXE010000030.1 Protein Homology CDS 1872 2273 . - 0 ID=cds-MCP9538368.1;Parent=gene-NND05_12605;Dbxref=NCBI_GP:MCP9538368.1;Name=MCP9538368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847698.1;locus_tag=NND05_12605;product=HIT family protein;protein_id=MCP9538368.1;transl_table=11 JANDXE010000030.1 Genbank gene 2384 2851 . - . ID=gene-NND05_12610;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NND05_12610 JANDXE010000030.1 Protein Homology CDS 2384 2851 . - 0 ID=cds-MCP9538369.1;Parent=gene-NND05_12610;Dbxref=NCBI_GP:MCP9538369.1;Name=MCP9538369.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368881.1;locus_tag=NND05_12610;product=transcription elongation factor GreA;protein_id=MCP9538369.1;transl_table=11 JANDXE010000030.1 Genbank gene 3011 6520 . - . ID=gene-NND05_12615;Name=NND05_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12615 JANDXE010000030.1 Protein Homology CDS 3011 6520 . - 0 ID=cds-MCP9538370.1;Parent=gene-NND05_12615;Dbxref=NCBI_GP:MCP9538370.1;Name=MCP9538370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847696.1;locus_tag=NND05_12615;product=DEAD/DEAH box helicase;protein_id=MCP9538370.1;transl_table=11 JANDXE010000030.1 Genbank gene 6721 7188 . + . ID=gene-NND05_12620;Name=NND05_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12620 JANDXE010000030.1 Protein Homology CDS 6721 7188 . + 0 ID=cds-MCP9538371.1;Parent=gene-NND05_12620;Dbxref=NCBI_GP:MCP9538371.1;Name=MCP9538371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353039.1;locus_tag=NND05_12620;product=nucleoside deaminase;protein_id=MCP9538371.1;transl_table=11 JANDXE010000030.1 Genbank gene 7329 8636 . + . ID=gene-NND05_12625;Name=NND05_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12625 JANDXE010000030.1 Protein Homology CDS 7329 8636 . + 0 ID=cds-MCP9538372.1;Parent=gene-NND05_12625;Dbxref=NCBI_GP:MCP9538372.1;Name=MCP9538372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007903154.1;locus_tag=NND05_12625;product=purine permease;protein_id=MCP9538372.1;transl_table=11 JANDXE010000030.1 Genbank gene 8639 9625 . - . ID=gene-NND05_12630;Name=NND05_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12630 JANDXE010000030.1 Protein Homology CDS 8639 9625 . - 0 ID=cds-MCP9538373.1;Parent=gene-NND05_12630;Dbxref=NCBI_GP:MCP9538373.1;Name=MCP9538373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847691.1;locus_tag=NND05_12630;product=esterase;protein_id=MCP9538373.1;transl_table=11 JANDXE010000030.1 Genbank gene 9797 10363 . + . ID=gene-NND05_12635;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=NND05_12635 JANDXE010000030.1 Protein Homology CDS 9797 10363 . + 0 ID=cds-MCP9538374.1;Parent=gene-NND05_12635;Dbxref=NCBI_GP:MCP9538374.1;Name=MCP9538374.1;Ontology_term=GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855972.1;locus_tag=NND05_12635;product=xanthine phosphoribosyltransferase;protein_id=MCP9538374.1;transl_table=11 JANDXE010000030.1 Genbank gene 10431 11624 . - . ID=gene-NND05_12640;Name=NND05_12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12640 JANDXE010000030.1 Protein Homology CDS 10431 11624 . - 0 ID=cds-MCP9538375.1;Parent=gene-NND05_12640;Dbxref=NCBI_GP:MCP9538375.1;Name=MCP9538375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281612.1;locus_tag=NND05_12640;product=GDSL-type esterase/lipase family protein;protein_id=MCP9538375.1;transl_table=11 JANDXE010000030.1 Genbank gene 11751 12962 . + . ID=gene-NND05_12645;Name=gluP;gbkey=Gene;gene=gluP;gene_biotype=protein_coding;locus_tag=NND05_12645 JANDXE010000030.1 Protein Homology CDS 11751 12962 . + 0 ID=cds-MCP9538376.1;Parent=gene-NND05_12645;Dbxref=NCBI_GP:MCP9538376.1;Name=MCP9538376.1;gbkey=CDS;gene=gluP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360591.1;locus_tag=NND05_12645;product=glucose/galactose MFS transporter;protein_id=MCP9538376.1;transl_table=11 JANDXE010000030.1 Genbank gene 13052 13927 . - . ID=gene-NND05_12650;Name=NND05_12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12650 JANDXE010000030.1 Protein Homology CDS 13052 13927 . - 0 ID=cds-MCP9538377.1;Parent=gene-NND05_12650;Dbxref=NCBI_GP:MCP9538377.1;Name=MCP9538377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005804731.1;locus_tag=NND05_12650;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538377.1;transl_table=11 JANDXE010000030.1 Genbank gene 14032 15522 . - . ID=gene-NND05_12655;Name=NND05_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12655 JANDXE010000030.1 Protein Homology CDS 14032 15522 . - 0 ID=cds-MCP9538378.1;Parent=gene-NND05_12655;Dbxref=NCBI_GP:MCP9538378.1;Name=MCP9538378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.2;locus_tag=NND05_12655;product=putative DNA binding domain-containing protein;protein_id=MCP9538378.1;transl_table=11 JANDXE010000030.1 Genbank gene 15861 16160 . - . ID=gene-NND05_12660;Name=NND05_12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12660 JANDXE010000030.1 Protein Homology CDS 15861 16160 . - 0 ID=cds-MCP9538379.1;Parent=gene-NND05_12660;Dbxref=NCBI_GP:MCP9538379.1;Name=MCP9538379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847682.1;locus_tag=NND05_12660;product=hypothetical protein;protein_id=MCP9538379.1;transl_table=11 JANDXE010000030.1 Genbank gene 16165 16308 . - . ID=gene-NND05_12665;Name=NND05_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12665 JANDXE010000030.1 GeneMarkS-2+ CDS 16165 16308 . - 0 ID=cds-MCP9538380.1;Parent=gene-NND05_12665;Dbxref=NCBI_GP:MCP9538380.1;Name=MCP9538380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12665;product=hypothetical protein;protein_id=MCP9538380.1;transl_table=11 JANDXE010000030.1 Genbank gene 16632 17291 . + . ID=gene-NND05_12670;Name=NND05_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12670 JANDXE010000030.1 Protein Homology CDS 16632 17291 . + 0 ID=cds-MCP9538381.1;Parent=gene-NND05_12670;Dbxref=NCBI_GP:MCP9538381.1;Name=MCP9538381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016662697.1;locus_tag=NND05_12670;product=hypothetical protein;protein_id=MCP9538381.1;transl_table=11 JANDXE010000030.1 Genbank gene 17493 18338 . - . ID=gene-NND05_12675;Name=NND05_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12675 JANDXE010000030.1 GeneMarkS-2+ CDS 17493 18338 . - 0 ID=cds-MCP9538382.1;Parent=gene-NND05_12675;Dbxref=NCBI_GP:MCP9538382.1;Name=MCP9538382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12675;product=hypothetical protein;protein_id=MCP9538382.1;transl_table=11 JANDXE010000030.1 Genbank gene 18370 19947 . - . ID=gene-NND05_12680;Name=NND05_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12680 JANDXE010000030.1 Protein Homology CDS 18370 19947 . - 0 ID=cds-MCP9538383.1;Parent=gene-NND05_12680;Dbxref=NCBI_GP:MCP9538383.1;Name=MCP9538383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618764.1;locus_tag=NND05_12680;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9538383.1;transl_table=11 JANDXE010000030.1 Genbank gene 19973 23137 . - . ID=gene-NND05_12685;Name=NND05_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12685 JANDXE010000030.1 Protein Homology CDS 19973 23137 . - 0 ID=cds-MCP9538384.1;Parent=gene-NND05_12685;Dbxref=NCBI_GP:MCP9538384.1;Name=MCP9538384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007856173.1;locus_tag=NND05_12685;product=TonB-dependent receptor;protein_id=MCP9538384.1;transl_table=11 JANDXE010000030.1 Genbank gene 23384 24394 . + . ID=gene-NND05_12690;Name=NND05_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12690 JANDXE010000030.1 Protein Homology CDS 23384 24394 . + 0 ID=cds-MCP9538385.1;Parent=gene-NND05_12690;Dbxref=NCBI_GP:MCP9538385.1;Name=MCP9538385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_12690;product=site-specific integrase;protein_id=MCP9538385.1;transl_table=11 JANDXE010000030.1 Genbank gene 25135 25569 . + . ID=gene-NND05_12695;Name=NND05_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12695 JANDXE010000030.1 Protein Homology CDS 25135 25569 . + 0 ID=cds-MCP9538386.1;Parent=gene-NND05_12695;Dbxref=NCBI_GP:MCP9538386.1;Name=MCP9538386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.2;locus_tag=NND05_12695;product=AAA family ATPase;protein_id=MCP9538386.1;transl_table=11 JANDXE010000030.1 Genbank gene 26324 26590 . + . ID=gene-NND05_12700;Name=NND05_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12700 JANDXE010000030.1 GeneMarkS-2+ CDS 26324 26590 . + 0 ID=cds-MCP9538387.1;Parent=gene-NND05_12700;Dbxref=NCBI_GP:MCP9538387.1;Name=MCP9538387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12700;product=hypothetical protein;protein_id=MCP9538387.1;transl_table=11 JANDXE010000030.1 Genbank gene 26902 28356 . - . ID=gene-NND05_12705;Name=NND05_12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12705 JANDXE010000030.1 GeneMarkS-2+ CDS 26902 28356 . - 0 ID=cds-MCP9538388.1;Parent=gene-NND05_12705;Dbxref=NCBI_GP:MCP9538388.1;Name=MCP9538388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12705;product=hypothetical protein;protein_id=MCP9538388.1;transl_table=11 JANDXE010000030.1 Genbank gene 29850 31073 . - . ID=gene-NND05_12710;Name=NND05_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12710 JANDXE010000030.1 Protein Homology CDS 29850 31073 . - 0 ID=cds-MCP9538389.1;Parent=gene-NND05_12710;Dbxref=NCBI_GP:MCP9538389.1;Name=MCP9538389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337707.1;locus_tag=NND05_12710;product=site-specific integrase;protein_id=MCP9538389.1;transl_table=11 JANDXE010000030.1 Genbank gene 31523 31738 . + . ID=gene-NND05_12715;Name=NND05_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12715 JANDXE010000030.1 Protein Homology CDS 31523 31738 . + 0 ID=cds-MCP9538390.1;Parent=gene-NND05_12715;Dbxref=NCBI_GP:MCP9538390.1;Name=MCP9538390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312215.1;locus_tag=NND05_12715;product=hypothetical protein;protein_id=MCP9538390.1;transl_table=11 JANDXE010000030.1 Genbank gene 31751 31990 . + . ID=gene-NND05_12720;Name=NND05_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12720 JANDXE010000030.1 Protein Homology CDS 31751 31990 . + 0 ID=cds-MCP9538391.1;Parent=gene-NND05_12720;Dbxref=NCBI_GP:MCP9538391.1;Name=MCP9538391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823735.1;locus_tag=NND05_12720;product=hypothetical protein;protein_id=MCP9538391.1;transl_table=11 JANDXE010000030.1 Genbank gene 32014 32439 . + . ID=gene-NND05_12725;Name=NND05_12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12725 JANDXE010000030.1 Protein Homology CDS 32014 32439 . + 0 ID=cds-MCP9538392.1;Parent=gene-NND05_12725;Dbxref=NCBI_GP:MCP9538392.1;Name=MCP9538392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312216.1;locus_tag=NND05_12725;product=PcfK-like family protein;protein_id=MCP9538392.1;transl_table=11 JANDXE010000030.1 Genbank gene 32436 33713 . + . ID=gene-NND05_12730;Name=NND05_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12730 JANDXE010000030.1 Protein Homology CDS 32436 33713 . + 0 ID=cds-MCP9538393.1;Parent=gene-NND05_12730;Dbxref=NCBI_GP:MCP9538393.1;Name=MCP9538393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823738.1;locus_tag=NND05_12730;product=PcfJ domain-containing protein;protein_id=MCP9538393.1;transl_table=11 JANDXE010000030.1 Genbank gene 34032 34529 . - . ID=gene-NND05_12735;Name=NND05_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12735 JANDXE010000030.1 Protein Homology CDS 34032 34529 . - 0 ID=cds-MCP9538394.1;Parent=gene-NND05_12735;Dbxref=NCBI_GP:MCP9538394.1;Name=MCP9538394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312218.1;locus_tag=NND05_12735;product=DUF3408 domain-containing protein;protein_id=MCP9538394.1;transl_table=11 JANDXE010000030.1 Genbank gene 34612 34779 . - . ID=gene-NND05_12740;Name=NND05_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12740 JANDXE010000030.1 Protein Homology CDS 34612 34779 . - 0 ID=cds-MCP9538395.1;Parent=gene-NND05_12740;Dbxref=NCBI_GP:MCP9538395.1;Name=MCP9538395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312219.1;locus_tag=NND05_12740;product=hypothetical protein;protein_id=MCP9538395.1;transl_table=11 JANDXE010000030.1 Genbank gene 34799 35452 . - . ID=gene-NND05_12745;Name=NND05_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12745 JANDXE010000030.1 Protein Homology CDS 34799 35452 . - 0 ID=cds-MCP9538396.1;Parent=gene-NND05_12745;Dbxref=NCBI_GP:MCP9538396.1;Name=MCP9538396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312220.1;locus_tag=NND05_12745;product=hypothetical protein;protein_id=MCP9538396.1;transl_table=11 JANDXE010000030.1 Genbank gene 35474 35920 . - . ID=gene-NND05_12750;Name=NND05_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12750 JANDXE010000030.1 Protein Homology CDS 35474 35920 . - 0 ID=cds-MCP9538397.1;Parent=gene-NND05_12750;Dbxref=NCBI_GP:MCP9538397.1;Name=MCP9538397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823748.1;locus_tag=NND05_12750;product=DUF3408 domain-containing protein;protein_id=MCP9538397.1;transl_table=11 JANDXE010000030.1 Genbank gene 35925 36683 . - . ID=gene-NND05_12755;Name=NND05_12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12755 JANDXE010000030.1 Protein Homology CDS 35925 36683 . - 0 ID=cds-MCP9538398.1;Parent=gene-NND05_12755;Dbxref=NCBI_GP:MCP9538398.1;Name=MCP9538398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823750.1;locus_tag=NND05_12755;product=ParA family protein;protein_id=MCP9538398.1;transl_table=11 ##sequence-region JANDXE010000002.1 1 243645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000002.1 Genbank region 1 243645 . + . ID=JANDXE010000002.1:1..243645;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000002.1 Genbank gene 199 1635 . - . ID=gene-NND05_01305;Name=NND05_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01305 JANDXE010000002.1 Protein Homology CDS 199 1635 . - 0 ID=cds-MCP9536205.1;Parent=gene-NND05_01305;Dbxref=NCBI_GP:MCP9536205.1;Name=MCP9536205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024386.2;locus_tag=NND05_01305;product=DUF3868 domain-containing protein;protein_id=MCP9536205.1;transl_table=11 JANDXE010000002.1 Genbank gene 1678 2262 . - . ID=gene-NND05_01310;Name=NND05_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01310 JANDXE010000002.1 Protein Homology CDS 1678 2262 . - 0 ID=cds-MCP9536206.1;Parent=gene-NND05_01310;Dbxref=NCBI_GP:MCP9536206.1;Name=MCP9536206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848794.1;locus_tag=NND05_01310;product=DUF3575 domain-containing protein;protein_id=MCP9536206.1;transl_table=11 JANDXE010000002.1 Genbank gene 3068 3880 . + . ID=gene-NND05_01315;Name=NND05_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01315 JANDXE010000002.1 Protein Homology CDS 3068 3880 . + 0 ID=cds-MCP9536207.1;Parent=gene-NND05_01315;Dbxref=NCBI_GP:MCP9536207.1;Name=MCP9536207.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=NND05_01315;product=LuxR C-terminal-related transcriptional regulator;protein_id=MCP9536207.1;transl_table=11 JANDXE010000002.1 Genbank gene 3954 5471 . - . ID=gene-NND05_01320;Name=NND05_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01320 JANDXE010000002.1 Protein Homology CDS 3954 5471 . - 0 ID=cds-MCP9536208.1;Parent=gene-NND05_01320;Dbxref=NCBI_GP:MCP9536208.1;Name=MCP9536208.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012218.1;locus_tag=NND05_01320;product=NAD(P)H-hydrate dehydratase;protein_id=MCP9536208.1;transl_table=11 JANDXE010000002.1 Genbank gene 5598 6137 . + . ID=gene-NND05_01325;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=NND05_01325 JANDXE010000002.1 Protein Homology CDS 5598 6137 . + 0 ID=cds-MCP9536209.1;Parent=gene-NND05_01325;Dbxref=NCBI_GP:MCP9536209.1;Name=MCP9536209.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848790.1;locus_tag=NND05_01325;product=hypoxanthine phosphoribosyltransferase;protein_id=MCP9536209.1;transl_table=11 JANDXE010000002.1 Genbank gene 6194 6766 . + . ID=gene-NND05_01330;Name=NND05_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01330 JANDXE010000002.1 Protein Homology CDS 6194 6766 . + 0 ID=cds-MCP9536210.1;Parent=gene-NND05_01330;Dbxref=NCBI_GP:MCP9536210.1;Name=MCP9536210.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351522.1;locus_tag=NND05_01330;product=adenylate kinase;protein_id=MCP9536210.1;transl_table=11 JANDXE010000002.1 Genbank gene 6837 7997 . + . ID=gene-NND05_01335;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=NND05_01335 JANDXE010000002.1 Protein Homology CDS 6837 7997 . + 0 ID=cds-MCP9536211.1;Parent=gene-NND05_01335;Dbxref=NCBI_GP:MCP9536211.1;Name=MCP9536211.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848787.1;locus_tag=NND05_01335;product=GTPase ObgE;protein_id=MCP9536211.1;transl_table=11 JANDXE010000002.1 Genbank gene 7990 8829 . + . ID=gene-NND05_01340;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=NND05_01340 JANDXE010000002.1 Protein Homology CDS 7990 8829 . + 0 ID=cds-MCP9536212.1;Parent=gene-NND05_01340;Dbxref=NCBI_GP:MCP9536212.1;Name=MCP9536212.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848786.1;locus_tag=NND05_01340;product=peptidoglycan editing factor PgeF;protein_id=MCP9536212.1;transl_table=11 JANDXE010000002.1 Genbank gene 8946 10169 . + . ID=gene-NND05_01345;Name=NND05_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01345 JANDXE010000002.1 Protein Homology CDS 8946 10169 . + 0 ID=cds-MCP9536213.1;Parent=gene-NND05_01345;Dbxref=NCBI_GP:MCP9536213.1;Name=MCP9536213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848785.1;locus_tag=NND05_01345;product=M23 family metallopeptidase;protein_id=MCP9536213.1;transl_table=11 JANDXE010000002.1 Genbank gene 10338 11060 . + . ID=gene-NND05_01350;Name=NND05_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01350 JANDXE010000002.1 Protein Homology CDS 10338 11060 . + 0 ID=cds-MCP9536214.1;Parent=gene-NND05_01350;Dbxref=NCBI_GP:MCP9536214.1;Name=MCP9536214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026080.2;locus_tag=NND05_01350;product=DUF4468 domain-containing protein;protein_id=MCP9536214.1;transl_table=11 JANDXE010000002.1 Genbank gene 11163 12185 . + . ID=gene-NND05_01355;Name=NND05_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01355 JANDXE010000002.1 Protein Homology CDS 11163 12185 . + 0 ID=cds-MCP9536215.1;Parent=gene-NND05_01355;Dbxref=NCBI_GP:MCP9536215.1;Name=MCP9536215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=NND05_01355;product=caspase family protein;protein_id=MCP9536215.1;transl_table=11 JANDXE010000002.1 Genbank gene 12267 12467 . - . ID=gene-NND05_01360;Name=NND05_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01360 JANDXE010000002.1 Protein Homology CDS 12267 12467 . - 0 ID=cds-MCP9536216.1;Parent=gene-NND05_01360;Dbxref=NCBI_GP:MCP9536216.1;Name=MCP9536216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228279.1;locus_tag=NND05_01360;product=hypothetical protein;protein_id=MCP9536216.1;transl_table=11 JANDXE010000002.1 Genbank gene 12489 13673 . - . ID=gene-NND05_01365;Name=NND05_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01365 JANDXE010000002.1 Protein Homology CDS 12489 13673 . - 0 ID=cds-MCP9536217.1;Parent=gene-NND05_01365;Dbxref=NCBI_GP:MCP9536217.1;Name=MCP9536217.1;Ontology_term=GO:0006164,GO:0003937,GO:0004643;gbkey=CDS;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377062.1;locus_tag=NND05_01365;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=MCP9536217.1;transl_table=11 JANDXE010000002.1 Genbank gene 13878 14132 . + . ID=gene-NND05_01370;Name=NND05_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01370 JANDXE010000002.1 GeneMarkS-2+ CDS 13878 14132 . + 0 ID=cds-MCP9536218.1;Parent=gene-NND05_01370;Dbxref=NCBI_GP:MCP9536218.1;Name=MCP9536218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01370;product=hypothetical protein;protein_id=MCP9536218.1;transl_table=11 JANDXE010000002.1 Genbank gene 14212 14577 . - . ID=gene-NND05_01375;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NND05_01375 JANDXE010000002.1 Protein Homology CDS 14212 14577 . - 0 ID=cds-MCP9536219.1;Parent=gene-NND05_01375;Dbxref=NCBI_GP:MCP9536219.1;Name=MCP9536219.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848781.1;locus_tag=NND05_01375;product=50S ribosomal protein L19;protein_id=MCP9536219.1;transl_table=11 JANDXE010000002.1 Genbank gene 14845 15621 . + . ID=gene-NND05_01380;Name=NND05_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01380 JANDXE010000002.1 Protein Homology CDS 14845 15621 . + 0 ID=cds-MCP9536220.1;Parent=gene-NND05_01380;Dbxref=NCBI_GP:MCP9536220.1;Name=MCP9536220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844042.1;locus_tag=NND05_01380;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=MCP9536220.1;transl_table=11 JANDXE010000002.1 Genbank gene 15690 16604 . + . ID=gene-NND05_01385;Name=NND05_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01385 JANDXE010000002.1 Protein Homology CDS 15690 16604 . + 0 ID=cds-MCP9536221.1;Parent=gene-NND05_01385;Dbxref=NCBI_GP:MCP9536221.1;Name=MCP9536221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848778.1;locus_tag=NND05_01385;product=metallophosphatase;protein_id=MCP9536221.1;transl_table=11 JANDXE010000002.1 Genbank gene 16691 18361 . - . ID=gene-NND05_01390;Name=NND05_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01390 JANDXE010000002.1 Protein Homology CDS 16691 18361 . - 0 ID=cds-MCP9536222.1;Parent=gene-NND05_01390;Dbxref=NCBI_GP:MCP9536222.1;Name=MCP9536222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848777.1;locus_tag=NND05_01390;product=glycoside hydrolase family 43 protein;protein_id=MCP9536222.1;transl_table=11 JANDXE010000002.1 Genbank gene 18562 22632 . - . ID=gene-NND05_01395;Name=NND05_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01395 JANDXE010000002.1 Protein Homology CDS 18562 22632 . - 0 ID=cds-MCP9536223.1;Parent=gene-NND05_01395;Dbxref=NCBI_GP:MCP9536223.1;Name=MCP9536223.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464050.1;locus_tag=NND05_01395;product=response regulator;protein_id=MCP9536223.1;transl_table=11 JANDXE010000002.1 Genbank gene 23149 24573 . + . ID=gene-NND05_01400;Name=NND05_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01400 JANDXE010000002.1 Protein Homology CDS 23149 24573 . + 0 ID=cds-MCP9536224.1;Parent=gene-NND05_01400;Dbxref=NCBI_GP:MCP9536224.1;Name=MCP9536224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012377.2;locus_tag=NND05_01400;product=glycoside hydrolase family 5 protein;protein_id=MCP9536224.1;transl_table=11 JANDXE010000002.1 Genbank gene 24705 27878 . + . ID=gene-NND05_01405;Name=NND05_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01405 JANDXE010000002.1 Protein Homology CDS 24705 27878 . + 0 ID=cds-MCP9536225.1;Parent=gene-NND05_01405;Dbxref=NCBI_GP:MCP9536225.1;Name=MCP9536225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008024353.1;locus_tag=NND05_01405;product=TonB-dependent receptor;protein_id=MCP9536225.1;transl_table=11 JANDXE010000002.1 Genbank gene 27907 29808 . + . ID=gene-NND05_01410;Name=NND05_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01410 JANDXE010000002.1 Protein Homology CDS 27907 29808 . + 0 ID=cds-MCP9536226.1;Parent=gene-NND05_01410;Dbxref=NCBI_GP:MCP9536226.1;Name=MCP9536226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004309631.1;locus_tag=NND05_01410;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536226.1;transl_table=11 JANDXE010000002.1 Genbank gene 29857 32685 . + . ID=gene-NND05_01415;Name=NND05_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01415 JANDXE010000002.1 Protein Homology CDS 29857 32685 . + 0 ID=cds-MCP9536227.1;Parent=gene-NND05_01415;Dbxref=NCBI_GP:MCP9536227.1;Name=MCP9536227.1;Ontology_term=GO:0071702,GO:0022857,GO:0045203;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=organic substance transport|0071702||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007561440.1;locus_tag=NND05_01415;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=MCP9536227.1;transl_table=11 JANDXE010000002.1 Genbank gene 32721 34529 . + . ID=gene-NND05_01420;Name=NND05_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01420 JANDXE010000002.1 Protein Homology CDS 32721 34529 . + 0 ID=cds-MCP9536228.1;Parent=gene-NND05_01420;Dbxref=NCBI_GP:MCP9536228.1;Name=MCP9536228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843626.1;locus_tag=NND05_01420;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536228.1;transl_table=11 JANDXE010000002.1 Genbank gene 34570 35592 . + . ID=gene-NND05_01425;Name=NND05_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01425 JANDXE010000002.1 Protein Homology CDS 34570 35592 . + 0 ID=cds-MCP9536229.1;Parent=gene-NND05_01425;Dbxref=NCBI_GP:MCP9536229.1;Name=MCP9536229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020111.2;locus_tag=NND05_01425;product=DUF1735 domain-containing protein;protein_id=MCP9536229.1;transl_table=11 JANDXE010000002.1 Genbank gene 35628 37904 . + . ID=gene-NND05_01430;Name=NND05_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01430 JANDXE010000002.1 Protein Homology CDS 35628 37904 . + 0 ID=cds-MCP9536230.1;Parent=gene-NND05_01430;Dbxref=NCBI_GP:MCP9536230.1;Name=MCP9536230.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007666414.1;locus_tag=NND05_01430;product=endo-1%2C4-beta-xylanase;protein_id=MCP9536230.1;transl_table=11 JANDXE010000002.1 Genbank gene 37975 39849 . + . ID=gene-NND05_01435;Name=NND05_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01435 JANDXE010000002.1 Protein Homology CDS 37975 39849 . + 0 ID=cds-MCP9536231.1;Parent=gene-NND05_01435;Dbxref=NCBI_GP:MCP9536231.1;Name=MCP9536231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849121.1;locus_tag=NND05_01435;product=alpha/beta hydrolase-fold protein;protein_id=MCP9536231.1;transl_table=11 JANDXE010000002.1 Genbank gene 40175 43207 . + . ID=gene-NND05_01440;Name=NND05_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01440 JANDXE010000002.1 Protein Homology CDS 40175 43207 . + 0 ID=cds-MCP9536232.1;Parent=gene-NND05_01440;Dbxref=NCBI_GP:MCP9536232.1;Name=MCP9536232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017141023.1;locus_tag=NND05_01440;product=TonB-dependent receptor;protein_id=MCP9536232.1;transl_table=11 JANDXE010000002.1 Genbank gene 43269 45029 . + . ID=gene-NND05_01445;Name=NND05_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01445 JANDXE010000002.1 Protein Homology CDS 43269 45029 . + 0 ID=cds-MCP9536233.1;Parent=gene-NND05_01445;Dbxref=NCBI_GP:MCP9536233.1;Name=MCP9536233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019592.2;locus_tag=NND05_01445;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536233.1;transl_table=11 JANDXE010000002.1 Genbank gene 45149 47668 . + . ID=gene-NND05_01450;Name=NND05_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01450 JANDXE010000002.1 Protein Homology CDS 45149 47668 . + 0 ID=cds-MCP9536234.1;Parent=gene-NND05_01450;Dbxref=NCBI_GP:MCP9536234.1;Name=MCP9536234.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849124.1;locus_tag=NND05_01450;product=glycosyl hydrolase family 8;protein_id=MCP9536234.1;transl_table=11 JANDXE010000002.1 Genbank gene 47681 48385 . + . ID=gene-NND05_01455;Name=NND05_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01455 JANDXE010000002.1 Protein Homology CDS 47681 48385 . + 0 ID=cds-MCP9536235.1;Parent=gene-NND05_01455;Dbxref=NCBI_GP:MCP9536235.1;Name=MCP9536235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849125.1;locus_tag=NND05_01455;product=acetylxylan esterase;protein_id=MCP9536235.1;transl_table=11 JANDXE010000002.1 Genbank gene 48406 49896 . + . ID=gene-NND05_01460;Name=NND05_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01460 JANDXE010000002.1 Protein Homology CDS 48406 49896 . + 0 ID=cds-MCP9536236.1;Parent=gene-NND05_01460;Dbxref=NCBI_GP:MCP9536236.1;Name=MCP9536236.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007175200.1;locus_tag=NND05_01460;product=family 43 glycosylhydrolase;protein_id=MCP9536236.1;transl_table=11 JANDXE010000002.1 Genbank gene 49947 52553 . + . ID=gene-NND05_01465;Name=NND05_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01465 JANDXE010000002.1 Protein Homology CDS 49947 52553 . + 0 ID=cds-MCP9536237.1;Parent=gene-NND05_01465;Dbxref=NCBI_GP:MCP9536237.1;Name=MCP9536237.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849130.1;locus_tag=NND05_01465;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=MCP9536237.1;transl_table=11 JANDXE010000002.1 Genbank gene 52615 52752 . + . ID=gene-NND05_01470;Name=NND05_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01470 JANDXE010000002.1 GeneMarkS-2+ CDS 52615 52752 . + 0 ID=cds-MCP9536238.1;Parent=gene-NND05_01470;Dbxref=NCBI_GP:MCP9536238.1;Name=MCP9536238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01470;product=hypothetical protein;protein_id=MCP9536238.1;transl_table=11 JANDXE010000002.1 Genbank gene 52828 53355 . + . ID=gene-NND05_01475;Name=NND05_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01475 JANDXE010000002.1 GeneMarkS-2+ CDS 52828 53355 . + 0 ID=cds-MCP9536239.1;Parent=gene-NND05_01475;Dbxref=NCBI_GP:MCP9536239.1;Name=MCP9536239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01475;product=hypothetical protein;protein_id=MCP9536239.1;transl_table=11 JANDXE010000002.1 Genbank gene 53372 53722 . + . ID=gene-NND05_01480;Name=NND05_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01480 JANDXE010000002.1 GeneMarkS-2+ CDS 53372 53722 . + 0 ID=cds-MCP9536240.1;Parent=gene-NND05_01480;Dbxref=NCBI_GP:MCP9536240.1;Name=MCP9536240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01480;product=RHS repeat protein;protein_id=MCP9536240.1;transl_table=11 JANDXE010000002.1 Genbank gene 53748 54590 . + . ID=gene-NND05_01485;Name=NND05_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01485 JANDXE010000002.1 Protein Homology CDS 53748 54590 . + 0 ID=cds-MCP9536241.1;Parent=gene-NND05_01485;Dbxref=NCBI_GP:MCP9536241.1;Name=MCP9536241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=NND05_01485;product=hypothetical protein;protein_id=MCP9536241.1;transl_table=11 JANDXE010000002.1 Genbank gene 54592 55128 . + . ID=gene-NND05_01490;Name=NND05_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01490 JANDXE010000002.1 GeneMarkS-2+ CDS 54592 55128 . + 0 ID=cds-MCP9536242.1;Parent=gene-NND05_01490;Dbxref=NCBI_GP:MCP9536242.1;Name=MCP9536242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01490;product=hypothetical protein;protein_id=MCP9536242.1;transl_table=11 JANDXE010000002.1 Genbank gene 55167 55679 . + . ID=gene-NND05_01495;Name=NND05_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01495 JANDXE010000002.1 GeneMarkS-2+ CDS 55167 55679 . + 0 ID=cds-MCP9536243.1;Parent=gene-NND05_01495;Dbxref=NCBI_GP:MCP9536243.1;Name=MCP9536243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01495;product=hypothetical protein;protein_id=MCP9536243.1;transl_table=11 JANDXE010000002.1 Genbank gene 55681 56109 . + . ID=gene-NND05_01500;Name=NND05_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01500 JANDXE010000002.1 Protein Homology CDS 55681 56109 . + 0 ID=cds-MCP9536244.1;Parent=gene-NND05_01500;Dbxref=NCBI_GP:MCP9536244.1;Name=MCP9536244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026967.2;locus_tag=NND05_01500;product=YbbC/YhhH family protein;protein_id=MCP9536244.1;transl_table=11 JANDXE010000002.1 Genbank gene 56121 56549 . + . ID=gene-NND05_01505;Name=NND05_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01505 JANDXE010000002.1 Protein Homology CDS 56121 56549 . + 0 ID=cds-MCP9536245.1;Parent=gene-NND05_01505;Dbxref=NCBI_GP:MCP9536245.1;Name=MCP9536245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026967.2;locus_tag=NND05_01505;product=YbbC/YhhH family protein;protein_id=MCP9536245.1;transl_table=11 JANDXE010000002.1 Genbank gene 56668 57120 . + . ID=gene-NND05_01510;Name=NND05_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01510 JANDXE010000002.1 GeneMarkS-2+ CDS 56668 57120 . + 0 ID=cds-MCP9536246.1;Parent=gene-NND05_01510;Dbxref=NCBI_GP:MCP9536246.1;Name=MCP9536246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01510;product=hypothetical protein;protein_id=MCP9536246.1;transl_table=11 JANDXE010000002.1 Genbank gene 58250 59821 . + . ID=gene-NND05_01515;Name=NND05_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01515 JANDXE010000002.1 Protein Homology CDS 58250 59821 . + 0 ID=cds-MCP9536247.1;Parent=gene-NND05_01515;Dbxref=NCBI_GP:MCP9536247.1;Name=MCP9536247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849132.1;locus_tag=NND05_01515;product=ATP-binding protein;protein_id=MCP9536247.1;transl_table=11 JANDXE010000002.1 Genbank gene 59979 62888 . + . ID=gene-NND05_01520;Name=NND05_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01520 JANDXE010000002.1 Protein Homology CDS 59979 62888 . + 0 ID=cds-MCP9536248.1;Parent=gene-NND05_01520;Dbxref=NCBI_GP:MCP9536248.1;Name=MCP9536248.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344498.1;locus_tag=NND05_01520;product=family 43 glycosylhydrolase;protein_id=MCP9536248.1;transl_table=11 JANDXE010000002.1 Genbank gene 62878 65298 . + . ID=gene-NND05_01525;Name=NND05_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01525 JANDXE010000002.1 Protein Homology CDS 62878 65298 . + 0 ID=cds-MCP9536249.1;Parent=gene-NND05_01525;Dbxref=NCBI_GP:MCP9536249.1;Name=MCP9536249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849136.1;locus_tag=NND05_01525;product=glycoside hydrolase family 95 protein;protein_id=MCP9536249.1;transl_table=11 JANDXE010000002.1 Genbank gene 65417 67555 . + . ID=gene-NND05_01530;Name=NND05_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01530 JANDXE010000002.1 Protein Homology CDS 65417 67555 . + 0 ID=cds-MCP9536250.1;Parent=gene-NND05_01530;Dbxref=NCBI_GP:MCP9536250.1;Name=MCP9536250.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849137.1;locus_tag=NND05_01530;product=family 43 glycosylhydrolase;protein_id=MCP9536250.1;transl_table=11 JANDXE010000002.1 Genbank gene 67557 68303 . - . ID=gene-NND05_01535;Name=NND05_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01535 JANDXE010000002.1 Protein Homology CDS 67557 68303 . - 0 ID=cds-MCP9536251.1;Parent=gene-NND05_01535;Dbxref=NCBI_GP:MCP9536251.1;Name=MCP9536251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435192.1;locus_tag=NND05_01535;product=PorT family protein;protein_id=MCP9536251.1;transl_table=11 JANDXE010000002.1 Genbank gene 68531 68698 . + . ID=gene-NND05_01540;Name=NND05_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01540 JANDXE010000002.1 Protein Homology CDS 68531 68698 . + 0 ID=cds-MCP9536252.1;Parent=gene-NND05_01540;Dbxref=NCBI_GP:MCP9536252.1;Name=MCP9536252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065171.1;locus_tag=NND05_01540;product=4Fe-4S binding protein;protein_id=MCP9536252.1;transl_table=11 JANDXE010000002.1 Genbank gene 68856 70277 . - . ID=gene-NND05_01545;Name=NND05_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01545 JANDXE010000002.1 Protein Homology CDS 68856 70277 . - 0 ID=cds-MCP9536253.1;Parent=gene-NND05_01545;Dbxref=NCBI_GP:MCP9536253.1;Name=MCP9536253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919645.1;locus_tag=NND05_01545;product=tetratricopeptide repeat protein;protein_id=MCP9536253.1;transl_table=11 JANDXE010000002.1 Genbank gene 70301 71260 . - . ID=gene-NND05_01550;Name=NND05_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01550 JANDXE010000002.1 Protein Homology CDS 70301 71260 . - 0 ID=cds-MCP9536254.1;Parent=gene-NND05_01550;Dbxref=NCBI_GP:MCP9536254.1;Name=MCP9536254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004355780.1;locus_tag=NND05_01550;product=substrate-binding domain-containing protein;protein_id=MCP9536254.1;transl_table=11 JANDXE010000002.1 Genbank gene 71265 72113 . - . ID=gene-NND05_01555;Name=NND05_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01555 JANDXE010000002.1 Protein Homology CDS 71265 72113 . - 0 ID=cds-MCP9536255.1;Parent=gene-NND05_01555;Dbxref=NCBI_GP:MCP9536255.1;Name=MCP9536255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371569.1;locus_tag=NND05_01555;product=energy transducer TonB;protein_id=MCP9536255.1;transl_table=11 JANDXE010000002.1 Genbank gene 72147 72794 . - . ID=gene-NND05_01560;Name=NND05_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01560 JANDXE010000002.1 Protein Homology CDS 72147 72794 . - 0 ID=cds-MCP9536256.1;Parent=gene-NND05_01560;Dbxref=NCBI_GP:MCP9536256.1;Name=MCP9536256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134416.1;locus_tag=NND05_01560;product=biopolymer transporter ExbD;protein_id=MCP9536256.1;transl_table=11 JANDXE010000002.1 Genbank gene 72795 73439 . - . ID=gene-NND05_01565;Name=NND05_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01565 JANDXE010000002.1 Protein Homology CDS 72795 73439 . - 0 ID=cds-MCP9536257.1;Parent=gene-NND05_01565;Dbxref=NCBI_GP:MCP9536257.1;Name=MCP9536257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849144.1;locus_tag=NND05_01565;product=biopolymer transporter ExbD;protein_id=MCP9536257.1;transl_table=11 JANDXE010000002.1 Genbank gene 73470 74306 . - . ID=gene-NND05_01570;Name=NND05_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01570 JANDXE010000002.1 Protein Homology CDS 73470 74306 . - 0 ID=cds-MCP9536258.1;Parent=gene-NND05_01570;Dbxref=NCBI_GP:MCP9536258.1;Name=MCP9536258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014710470.1;locus_tag=NND05_01570;product=MotA/TolQ/ExbB proton channel family protein;protein_id=MCP9536258.1;transl_table=11 JANDXE010000002.1 Genbank gene 74572 75765 . - . ID=gene-NND05_01575;Name=NND05_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01575 JANDXE010000002.1 Protein Homology CDS 74572 75765 . - 0 ID=cds-MCP9536259.1;Parent=gene-NND05_01575;Dbxref=NCBI_GP:MCP9536259.1;Name=MCP9536259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967996.1;locus_tag=NND05_01575;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCP9536259.1;transl_table=11 JANDXE010000002.1 Genbank gene 75879 77090 . - . ID=gene-NND05_01580;Name=NND05_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01580 JANDXE010000002.1 Protein Homology CDS 75879 77090 . - 0 ID=cds-MCP9536260.1;Parent=gene-NND05_01580;Dbxref=NCBI_GP:MCP9536260.1;Name=MCP9536260.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849147.1;locus_tag=NND05_01580;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=MCP9536260.1;transl_table=11 JANDXE010000002.1 Genbank gene 77111 79000 . - . ID=gene-NND05_01585;Name=NND05_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01585 JANDXE010000002.1 Protein Homology CDS 77111 79000 . - 0 ID=cds-MCP9536261.1;Parent=gene-NND05_01585;Dbxref=NCBI_GP:MCP9536261.1;Name=MCP9536261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283603.1;locus_tag=NND05_01585;product=LptF/LptG family permease;protein_id=MCP9536261.1;transl_table=11 JANDXE010000002.1 Genbank gene 79258 79331 . + . ID=gene-NND05_01590;Name=NND05_01590;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_01590 JANDXE010000002.1 tRNAscan-SE tRNA 79258 79331 . + . ID=rna-NND05_01590;Parent=gene-NND05_01590;anticodon=(pos:79292..79294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_01590;product=tRNA-Met JANDXE010000002.1 tRNAscan-SE exon 79258 79331 . + . ID=exon-NND05_01590-1;Parent=rna-NND05_01590;anticodon=(pos:79292..79294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_01590;product=tRNA-Met JANDXE010000002.1 Genbank gene 79785 80456 . + . ID=gene-NND05_01595;Name=NND05_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01595 JANDXE010000002.1 Protein Homology CDS 79785 80456 . + 0 ID=cds-MCP9536262.1;Parent=gene-NND05_01595;Dbxref=NCBI_GP:MCP9536262.1;Name=MCP9536262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_01595;product=helix-turn-helix domain-containing protein;protein_id=MCP9536262.1;transl_table=11 JANDXE010000002.1 Genbank gene 80587 82005 . - . ID=gene-NND05_01600;Name=NND05_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01600 JANDXE010000002.1 Protein Homology CDS 80587 82005 . - 0 ID=cds-MCP9536263.1;Parent=gene-NND05_01600;Dbxref=NCBI_GP:MCP9536263.1;Name=MCP9536263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463426.1;locus_tag=NND05_01600;product=aspartate ammonia-lyase;protein_id=MCP9536263.1;transl_table=11 JANDXE010000002.1 Genbank gene 82283 85084 . + . ID=gene-NND05_01605;Name=NND05_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01605 JANDXE010000002.1 Protein Homology CDS 82283 85084 . + 0 ID=cds-MCP9536264.1;Parent=gene-NND05_01605;Dbxref=NCBI_GP:MCP9536264.1;Name=MCP9536264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849151.1;locus_tag=NND05_01605;product=substrate-binding domain-containing protein;protein_id=MCP9536264.1;transl_table=11 JANDXE010000002.1 Genbank gene 85124 87397 . + . ID=gene-NND05_01610;Name=NND05_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01610 JANDXE010000002.1 Protein Homology CDS 85124 87397 . + 0 ID=cds-MCP9536265.1;Parent=gene-NND05_01610;Dbxref=NCBI_GP:MCP9536265.1;Name=MCP9536265.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796688.1;locus_tag=NND05_01610;product=GH92 family glycosyl hydrolase;protein_id=MCP9536265.1;transl_table=11 JANDXE010000002.1 Genbank gene 87906 89027 . - . ID=gene-NND05_01615;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NND05_01615 JANDXE010000002.1 Protein Homology CDS 87906 89027 . - 0 ID=cds-MCP9536266.1;Parent=gene-NND05_01615;Dbxref=NCBI_GP:MCP9536266.1;Name=MCP9536266.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464189.1;locus_tag=NND05_01615;product=DNA polymerase IV;protein_id=MCP9536266.1;transl_table=11 JANDXE010000002.1 Genbank gene 89309 91573 . + . ID=gene-NND05_01620;Name=NND05_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01620 JANDXE010000002.1 Protein Homology CDS 89309 91573 . + 0 ID=cds-MCP9536267.1;Parent=gene-NND05_01620;Dbxref=NCBI_GP:MCP9536267.1;Name=MCP9536267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005798945.1;locus_tag=NND05_01620;product=TonB-dependent receptor;protein_id=MCP9536267.1;transl_table=11 JANDXE010000002.1 Genbank gene 91737 93602 . + . ID=gene-NND05_01625;Name=NND05_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01625 JANDXE010000002.1 Protein Homology CDS 91737 93602 . + 0 ID=cds-MCP9536268.1;Parent=gene-NND05_01625;Dbxref=NCBI_GP:MCP9536268.1;Name=MCP9536268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364471.1;locus_tag=NND05_01625;product=GH32 C-terminal domain-containing protein;protein_id=MCP9536268.1;transl_table=11 JANDXE010000002.1 Genbank gene 93728 95494 . + . ID=gene-NND05_01630;Name=NND05_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01630 JANDXE010000002.1 Protein Homology CDS 93728 95494 . + 0 ID=cds-MCP9536269.1;Parent=gene-NND05_01630;Dbxref=NCBI_GP:MCP9536269.1;Name=MCP9536269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008666540.1;locus_tag=NND05_01630;product=ATP-binding protein;protein_id=MCP9536269.1;transl_table=11 JANDXE010000002.1 Genbank gene 95491 97005 . + . ID=gene-NND05_01635;Name=NND05_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01635 JANDXE010000002.1 Protein Homology CDS 95491 97005 . + 0 ID=cds-MCP9536270.1;Parent=gene-NND05_01635;Dbxref=NCBI_GP:MCP9536270.1;Name=MCP9536270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024799.2;locus_tag=NND05_01635;product=substrate-binding domain-containing protein;protein_id=MCP9536270.1;transl_table=11 JANDXE010000002.1 Genbank gene 97185 100298 . + . ID=gene-NND05_01640;Name=NND05_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01640 JANDXE010000002.1 Protein Homology CDS 97185 100298 . + 0 ID=cds-MCP9536271.1;Parent=gene-NND05_01640;Dbxref=NCBI_GP:MCP9536271.1;Name=MCP9536271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377920.1;locus_tag=NND05_01640;product=TonB-dependent receptor;protein_id=MCP9536271.1;transl_table=11 JANDXE010000002.1 Genbank gene 100331 102067 . + . ID=gene-NND05_01645;Name=NND05_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01645 JANDXE010000002.1 Protein Homology CDS 100331 102067 . + 0 ID=cds-MCP9536272.1;Parent=gene-NND05_01645;Dbxref=NCBI_GP:MCP9536272.1;Name=MCP9536272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004381088.1;locus_tag=NND05_01645;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536272.1;transl_table=11 JANDXE010000002.1 Genbank gene 102132 103850 . + . ID=gene-NND05_01650;Name=NND05_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01650 JANDXE010000002.1 Protein Homology CDS 102132 103850 . + 0 ID=cds-MCP9536273.1;Parent=gene-NND05_01650;Dbxref=NCBI_GP:MCP9536273.1;Name=MCP9536273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849160.1;locus_tag=NND05_01650;product=DUF4980 domain-containing protein;protein_id=MCP9536273.1;transl_table=11 JANDXE010000002.1 Genbank gene 104014 105165 . + . ID=gene-NND05_01655;Name=NND05_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01655 JANDXE010000002.1 Protein Homology CDS 104014 105165 . + 0 ID=cds-MCP9536274.1;Parent=gene-NND05_01655;Dbxref=NCBI_GP:MCP9536274.1;Name=MCP9536274.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367352.1;locus_tag=NND05_01655;product=MFS transporter;protein_id=MCP9536274.1;transl_table=11 JANDXE010000002.1 Genbank gene 105213 106103 . + . ID=gene-NND05_01660;Name=NND05_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01660 JANDXE010000002.1 Protein Homology CDS 105213 106103 . + 0 ID=cds-MCP9536275.1;Parent=gene-NND05_01660;Dbxref=NCBI_GP:MCP9536275.1;Name=MCP9536275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464494.1;locus_tag=NND05_01660;product=carbohydrate kinase;protein_id=MCP9536275.1;transl_table=11 JANDXE010000002.1 Genbank gene 106392 108050 . - . ID=gene-NND05_01665;Name=NND05_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01665 JANDXE010000002.1 Protein Homology CDS 106392 108050 . - 0 ID=cds-MCP9536276.1;Parent=gene-NND05_01665;Dbxref=NCBI_GP:MCP9536276.1;Name=MCP9536276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847887.1;locus_tag=NND05_01665;product=fumarate hydratase;protein_id=MCP9536276.1;transl_table=11 JANDXE010000002.1 Genbank gene 108161 110017 . - . ID=gene-NND05_01670;Name=NND05_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01670 JANDXE010000002.1 Protein Homology CDS 108161 110017 . - 0 ID=cds-MCP9536277.1;Parent=gene-NND05_01670;Dbxref=NCBI_GP:MCP9536277.1;Name=MCP9536277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919572.1;locus_tag=NND05_01670;product=DUF4954 family protein;protein_id=MCP9536277.1;transl_table=11 JANDXE010000002.1 Genbank gene 110039 111286 . - . ID=gene-NND05_01675;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NND05_01675 JANDXE010000002.1 Protein Homology CDS 110039 111286 . - 0 ID=cds-MCP9536278.1;Parent=gene-NND05_01675;Dbxref=NCBI_GP:MCP9536278.1;Name=MCP9536278.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353880.1;locus_tag=NND05_01675;product=GTPase HflX;protein_id=MCP9536278.1;transl_table=11 JANDXE010000002.1 Genbank gene 111613 113613 . + . ID=gene-NND05_01680;Name=NND05_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01680 JANDXE010000002.1 Protein Homology CDS 111613 113613 . + 0 ID=cds-MCP9536279.1;Parent=gene-NND05_01680;Dbxref=NCBI_GP:MCP9536279.1;Name=MCP9536279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919571.1;locus_tag=NND05_01680;product=glycoside hydrolase family 97 catalytic domain-containing protein;protein_id=MCP9536279.1;transl_table=11 JANDXE010000002.1 Genbank gene 114395 114835 . + . ID=gene-NND05_01685;Name=NND05_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01685 JANDXE010000002.1 GeneMarkS-2+ CDS 114395 114835 . + 0 ID=cds-MCP9536280.1;Parent=gene-NND05_01685;Dbxref=NCBI_GP:MCP9536280.1;Name=MCP9536280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01685;product=hypothetical protein;protein_id=MCP9536280.1;transl_table=11 JANDXE010000002.1 Genbank gene 114896 116122 . + . ID=gene-NND05_01690;Name=NND05_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01690 JANDXE010000002.1 Protein Homology CDS 114896 116122 . + 0 ID=cds-MCP9536281.1;Parent=gene-NND05_01690;Dbxref=NCBI_GP:MCP9536281.1;Name=MCP9536281.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016270747.1;locus_tag=NND05_01690;product=restriction endonuclease subunit S;protein_id=MCP9536281.1;transl_table=11 JANDXE010000002.1 Genbank gene 116182 116985 . - . ID=gene-NND05_01695;Name=NND05_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01695 JANDXE010000002.1 Protein Homology CDS 116182 116985 . - 0 ID=cds-MCP9536282.1;Parent=gene-NND05_01695;Dbxref=NCBI_GP:MCP9536282.1;Name=MCP9536282.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005678049.1;locus_tag=NND05_01695;product=tyrosine-type recombinase/integrase;protein_id=MCP9536282.1;transl_table=11 JANDXE010000002.1 Genbank gene 117059 118414 . - . ID=gene-NND05_01700;Name=NND05_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01700 JANDXE010000002.1 Protein Homology CDS 117059 118414 . - 0 ID=cds-MCP9536283.1;Parent=gene-NND05_01700;Dbxref=NCBI_GP:MCP9536283.1;Name=MCP9536283.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109307.1;locus_tag=NND05_01700;product=restriction endonuclease subunit S;protein_id=MCP9536283.1;transl_table=11 JANDXE010000002.1 Genbank gene 118435 119595 . - . ID=gene-NND05_01705;Name=NND05_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01705 JANDXE010000002.1 Protein Homology CDS 118435 119595 . - 0 ID=cds-MCP9536284.1;Parent=gene-NND05_01705;Dbxref=NCBI_GP:MCP9536284.1;Name=MCP9536284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848378.1;locus_tag=NND05_01705;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9536284.1;transl_table=11 JANDXE010000002.1 Genbank gene 119597 121030 . - . ID=gene-NND05_01710;Name=NND05_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01710 JANDXE010000002.1 Protein Homology CDS 119597 121030 . - 0 ID=cds-MCP9536285.1;Parent=gene-NND05_01710;Dbxref=NCBI_GP:MCP9536285.1;Name=MCP9536285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005839436.1;locus_tag=NND05_01710;product=type I restriction-modification system subunit M;protein_id=MCP9536285.1;transl_table=11 JANDXE010000002.1 Genbank pseudogene 121040 123756 . - . ID=gene-NND05_01715;Name=NND05_01715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_01715;pseudo=true JANDXE010000002.1 Protein Homology CDS 121040 123756 . - 0 ID=cds-NND05_01715;Parent=gene-NND05_01715;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007853730.1;locus_tag=NND05_01715;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11 JANDXE010000002.1 Genbank gene 123947 124225 . + . ID=gene-NND05_01720;Name=NND05_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01720 JANDXE010000002.1 GeneMarkS-2+ CDS 123947 124225 . + 0 ID=cds-MCP9536286.1;Parent=gene-NND05_01720;Dbxref=NCBI_GP:MCP9536286.1;Name=MCP9536286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01720;product=hypothetical protein;protein_id=MCP9536286.1;transl_table=11 JANDXE010000002.1 Genbank gene 124509 124835 . - . ID=gene-NND05_01725;Name=NND05_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01725 JANDXE010000002.1 GeneMarkS-2+ CDS 124509 124835 . - 0 ID=cds-MCP9536287.1;Parent=gene-NND05_01725;Dbxref=NCBI_GP:MCP9536287.1;Name=MCP9536287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01725;product=hypothetical protein;protein_id=MCP9536287.1;transl_table=11 JANDXE010000002.1 Genbank gene 125136 127652 . - . ID=gene-NND05_01730;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=NND05_01730 JANDXE010000002.1 Protein Homology CDS 125136 127652 . - 0 ID=cds-MCP9536288.1;Parent=gene-NND05_01730;Dbxref=NCBI_GP:MCP9536288.1;Name=MCP9536288.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847877.1;locus_tag=NND05_01730;product=ATP-dependent chaperone ClpB;protein_id=MCP9536288.1;transl_table=11 JANDXE010000002.1 Genbank gene 127684 127872 . - . ID=gene-NND05_01735;Name=NND05_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01735 JANDXE010000002.1 GeneMarkS-2+ CDS 127684 127872 . - 0 ID=cds-MCP9536289.1;Parent=gene-NND05_01735;Dbxref=NCBI_GP:MCP9536289.1;Name=MCP9536289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01735;product=hypothetical protein;protein_id=MCP9536289.1;transl_table=11 JANDXE010000002.1 Genbank gene 128024 128617 . + . ID=gene-NND05_01740;Name=NND05_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01740 JANDXE010000002.1 Protein Homology CDS 128024 128617 . + 0 ID=cds-MCP9536290.1;Parent=gene-NND05_01740;Dbxref=NCBI_GP:MCP9536290.1;Name=MCP9536290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134386.1;locus_tag=NND05_01740;product=IMP cyclohydrolase;protein_id=MCP9536290.1;transl_table=11 JANDXE010000002.1 Genbank gene 128730 129752 . + . ID=gene-NND05_01745;Name=NND05_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01745 JANDXE010000002.1 Protein Homology CDS 128730 129752 . + 0 ID=cds-MCP9536291.1;Parent=gene-NND05_01745;Dbxref=NCBI_GP:MCP9536291.1;Name=MCP9536291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004304915.1;locus_tag=NND05_01745;product=rod shape-determining protein;protein_id=MCP9536291.1;transl_table=11 JANDXE010000002.1 Genbank gene 129836 130714 . + . ID=gene-NND05_01750;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=NND05_01750 JANDXE010000002.1 Protein Homology CDS 129836 130714 . + 0 ID=cds-MCP9536292.1;Parent=gene-NND05_01750;Dbxref=NCBI_GP:MCP9536292.1;Name=MCP9536292.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847874.1;locus_tag=NND05_01750;product=rod shape-determining protein MreC;protein_id=MCP9536292.1;transl_table=11 JANDXE010000002.1 Genbank gene 130748 131248 . + . ID=gene-NND05_01755;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NND05_01755 JANDXE010000002.1 Protein Homology CDS 130748 131248 . + 0 ID=cds-MCP9536293.1;Parent=gene-NND05_01755;Dbxref=NCBI_GP:MCP9536293.1;Name=MCP9536293.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008125446.1;locus_tag=NND05_01755;product=rod shape-determining protein MreD;protein_id=MCP9536293.1;transl_table=11 JANDXE010000002.1 Genbank gene 131312 133162 . + . ID=gene-NND05_01760;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=NND05_01760 JANDXE010000002.1 Protein Homology CDS 131312 133162 . + 0 ID=cds-MCP9536294.1;Parent=gene-NND05_01760;Dbxref=NCBI_GP:MCP9536294.1;Name=MCP9536294.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341693.1;locus_tag=NND05_01760;product=penicillin-binding protein 2;protein_id=MCP9536294.1;transl_table=11 JANDXE010000002.1 Genbank gene 133238 134710 . + . ID=gene-NND05_01765;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=NND05_01765 JANDXE010000002.1 Protein Homology CDS 133238 134710 . + 0 ID=cds-MCP9536295.1;Parent=gene-NND05_01765;Dbxref=NCBI_GP:MCP9536295.1;Name=MCP9536295.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844003.1;locus_tag=NND05_01765;product=rod shape-determining protein RodA;protein_id=MCP9536295.1;transl_table=11 JANDXE010000002.1 Genbank gene 134790 135272 . - . ID=gene-NND05_01770;Name=NND05_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01770 JANDXE010000002.1 Protein Homology CDS 134790 135272 . - 0 ID=cds-MCP9536296.1;Parent=gene-NND05_01770;Dbxref=NCBI_GP:MCP9536296.1;Name=MCP9536296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283584.1;locus_tag=NND05_01770;product=gliding motility lipoprotein GldH;protein_id=MCP9536296.1;transl_table=11 JANDXE010000002.1 Genbank gene 135275 136630 . - . ID=gene-NND05_01775;Name=NND05_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01775 JANDXE010000002.1 Protein Homology CDS 135275 136630 . - 0 ID=cds-MCP9536297.1;Parent=gene-NND05_01775;Dbxref=NCBI_GP:MCP9536297.1;Name=MCP9536297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910338.1;locus_tag=NND05_01775;product=hypothetical protein;protein_id=MCP9536297.1;transl_table=11 JANDXE010000002.1 Genbank gene 136694 137806 . - . ID=gene-NND05_01780;Name=NND05_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01780 JANDXE010000002.1 Protein Homology CDS 136694 137806 . - 0 ID=cds-MCP9536298.1;Parent=gene-NND05_01780;Dbxref=NCBI_GP:MCP9536298.1;Name=MCP9536298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377131.1;locus_tag=NND05_01780;product=DNA polymerase III subunit delta;protein_id=MCP9536298.1;transl_table=11 JANDXE010000002.1 Genbank gene 137820 138776 . - . ID=gene-NND05_01785;Name=NND05_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01785 JANDXE010000002.1 Protein Homology CDS 137820 138776 . - 0 ID=cds-MCP9536299.1;Parent=gene-NND05_01785;Dbxref=NCBI_GP:MCP9536299.1;Name=MCP9536299.1;Ontology_term=GO:0006555,GO:0004489;gbkey=CDS;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341688.1;locus_tag=NND05_01785;product=methylenetetrahydrofolate reductase;protein_id=MCP9536299.1;transl_table=11 JANDXE010000002.1 Genbank gene 138917 140377 . + . ID=gene-NND05_01790;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=NND05_01790 JANDXE010000002.1 Protein Homology CDS 138917 140377 . + 0 ID=cds-MCP9536300.1;Parent=gene-NND05_01790;Dbxref=NCBI_GP:MCP9536300.1;Name=MCP9536300.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=xylE;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847865.1;locus_tag=NND05_01790;product=D-xylose transporter XylE;protein_id=MCP9536300.1;transl_table=11 JANDXE010000002.1 Genbank gene 140550 141206 . - . ID=gene-NND05_01795;Name=NND05_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01795 JANDXE010000002.1 Protein Homology CDS 140550 141206 . - 0 ID=cds-MCP9536301.1;Parent=gene-NND05_01795;Dbxref=NCBI_GP:MCP9536301.1;Name=MCP9536301.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027454.2;locus_tag=NND05_01795;product=DUF4840 domain-containing protein;protein_id=MCP9536301.1;transl_table=11 JANDXE010000002.1 Genbank gene 141470 141542 . - . ID=gene-NND05_01800;Name=NND05_01800;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_01800 JANDXE010000002.1 tRNAscan-SE tRNA 141470 141542 . - . ID=rna-NND05_01800;Parent=gene-NND05_01800;anticodon=(pos:complement(141507..141509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_01800;product=tRNA-Lys JANDXE010000002.1 tRNAscan-SE exon 141470 141542 . - . ID=exon-NND05_01800-1;Parent=rna-NND05_01800;anticodon=(pos:complement(141507..141509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_01800;product=tRNA-Lys JANDXE010000002.1 Genbank gene 141620 142759 . - . ID=gene-NND05_01805;Name=NND05_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01805 JANDXE010000002.1 Protein Homology CDS 141620 142759 . - 0 ID=cds-MCP9536302.1;Parent=gene-NND05_01805;Dbxref=NCBI_GP:MCP9536302.1;Name=MCP9536302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847861.1;locus_tag=NND05_01805;product=AI-2E family transporter;protein_id=MCP9536302.1;transl_table=11 JANDXE010000002.1 Genbank gene 142848 143429 . - . ID=gene-NND05_01810;Name=NND05_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01810 JANDXE010000002.1 Protein Homology CDS 142848 143429 . - 0 ID=cds-MCP9536303.1;Parent=gene-NND05_01810;Dbxref=NCBI_GP:MCP9536303.1;Name=MCP9536303.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369670.1;locus_tag=NND05_01810;product=thymidine kinase;protein_id=MCP9536303.1;transl_table=11 JANDXE010000002.1 Genbank gene 143526 144257 . + . ID=gene-NND05_01815;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=NND05_01815 JANDXE010000002.1 Protein Homology CDS 143526 144257 . + 0 ID=cds-MCP9536304.1;Parent=gene-NND05_01815;Dbxref=NCBI_GP:MCP9536304.1;Name=MCP9536304.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847859.1;locus_tag=NND05_01815;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=MCP9536304.1;transl_table=11 JANDXE010000002.1 Genbank gene 144299 145147 . + . ID=gene-NND05_01820;Name=NND05_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01820 JANDXE010000002.1 Protein Homology CDS 144299 145147 . + 0 ID=cds-MCP9536305.1;Parent=gene-NND05_01820;Dbxref=NCBI_GP:MCP9536305.1;Name=MCP9536305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371522.1;locus_tag=NND05_01820;product=hypothetical protein;protein_id=MCP9536305.1;transl_table=11 JANDXE010000002.1 Genbank gene 145151 145597 . - . ID=gene-NND05_01825;Name=NND05_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01825 JANDXE010000002.1 Protein Homology CDS 145151 145597 . - 0 ID=cds-MCP9536306.1;Parent=gene-NND05_01825;Dbxref=NCBI_GP:MCP9536306.1;Name=MCP9536306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377101.1;locus_tag=NND05_01825;product=nucleoside deaminase;protein_id=MCP9536306.1;transl_table=11 JANDXE010000002.1 Genbank gene 145750 146127 . + . ID=gene-NND05_01830;Name=NND05_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01830 JANDXE010000002.1 Protein Homology CDS 145750 146127 . + 0 ID=cds-MCP9536307.1;Parent=gene-NND05_01830;Dbxref=NCBI_GP:MCP9536307.1;Name=MCP9536307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344001.1;locus_tag=NND05_01830;product=YraN family protein;protein_id=MCP9536307.1;transl_table=11 JANDXE010000002.1 Genbank gene 146161 146913 . + . ID=gene-NND05_01835;Name=NND05_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01835 JANDXE010000002.1 Protein Homology CDS 146161 146913 . + 0 ID=cds-MCP9536308.1;Parent=gene-NND05_01835;Dbxref=NCBI_GP:MCP9536308.1;Name=MCP9536308.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847855.1;locus_tag=NND05_01835;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=MCP9536308.1;transl_table=11 JANDXE010000002.1 Genbank gene 146932 147642 . + . ID=gene-NND05_01840;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NND05_01840 JANDXE010000002.1 Protein Homology CDS 146932 147642 . + 0 ID=cds-MCP9536309.1;Parent=gene-NND05_01840;Dbxref=NCBI_GP:MCP9536309.1;Name=MCP9536309.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462521.1;locus_tag=NND05_01840;product=UMP kinase;protein_id=MCP9536309.1;transl_table=11 JANDXE010000002.1 Genbank gene 147794 148522 . - . ID=gene-NND05_01845;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NND05_01845 JANDXE010000002.1 Protein Homology CDS 147794 148522 . - 0 ID=cds-MCP9536310.1;Parent=gene-NND05_01845;Dbxref=NCBI_GP:MCP9536310.1;Name=MCP9536310.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371545.1;locus_tag=NND05_01845;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=MCP9536310.1;transl_table=11 JANDXE010000002.1 Genbank gene 148529 149221 . - . ID=gene-NND05_01850;Name=NND05_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01850 JANDXE010000002.1 Protein Homology CDS 148529 149221 . - 0 ID=cds-MCP9536311.1;Parent=gene-NND05_01850;Dbxref=NCBI_GP:MCP9536311.1;Name=MCP9536311.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343996.1;locus_tag=NND05_01850;product=phosphatidylserine decarboxylase family protein;protein_id=MCP9536311.1;transl_table=11 JANDXE010000002.1 Genbank gene 149360 153070 . + . ID=gene-NND05_01855;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NND05_01855 JANDXE010000002.1 Protein Homology CDS 149360 153070 . + 0 ID=cds-MCP9536312.1;Parent=gene-NND05_01855;Dbxref=NCBI_GP:MCP9536312.1;Name=MCP9536312.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919619.1;locus_tag=NND05_01855;product=DNA polymerase III subunit alpha;protein_id=MCP9536312.1;transl_table=11 JANDXE010000002.1 Genbank gene 153118 153432 . + . ID=gene-NND05_01860;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NND05_01860 JANDXE010000002.1 Protein Homology CDS 153118 153432 . + 0 ID=cds-MCP9536313.1;Parent=gene-NND05_01860;Dbxref=NCBI_GP:MCP9536313.1;Name=MCP9536313.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435672.1;locus_tag=NND05_01860;product=thioredoxin;protein_id=MCP9536313.1;transl_table=11 JANDXE010000002.1 Genbank gene 153530 153940 . - . ID=gene-NND05_01865;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NND05_01865 JANDXE010000002.1 Protein Homology CDS 153530 153940 . - 0 ID=cds-MCP9536314.1;Parent=gene-NND05_01865;Dbxref=NCBI_GP:MCP9536314.1;Name=MCP9536314.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134456.1;locus_tag=NND05_01865;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=MCP9536314.1;transl_table=11 JANDXE010000002.1 Genbank gene 153958 155571 . - . ID=gene-NND05_01870;Name=NND05_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01870 JANDXE010000002.1 Protein Homology CDS 153958 155571 . - 0 ID=cds-MCP9536315.1;Parent=gene-NND05_01870;Dbxref=NCBI_GP:MCP9536315.1;Name=MCP9536315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847847.1;locus_tag=NND05_01870;product=PglZ domain-containing protein;protein_id=MCP9536315.1;transl_table=11 JANDXE010000002.1 Genbank gene 155757 155852 . - . ID=gene-NND05_01875;Name=NND05_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01875 JANDXE010000002.1 Protein Homology CDS 155757 155852 . - 0 ID=cds-MCP9536316.1;Parent=gene-NND05_01875;Dbxref=NCBI_GP:MCP9536316.1;Name=MCP9536316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_01875;product=smalltalk protein;protein_id=MCP9536316.1;transl_table=11 JANDXE010000002.1 Genbank gene 156025 156612 . - . ID=gene-NND05_01880;Name=NND05_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01880 JANDXE010000002.1 Protein Homology CDS 156025 156612 . - 0 ID=cds-MCP9536317.1;Parent=gene-NND05_01880;Dbxref=NCBI_GP:MCP9536317.1;Name=MCP9536317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847339.1;locus_tag=NND05_01880;product=DNA-binding protein;protein_id=MCP9536317.1;transl_table=11 JANDXE010000002.1 Genbank gene 157174 158748 . + . ID=gene-NND05_01885;Name=NND05_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01885 JANDXE010000002.1 Protein Homology CDS 157174 158748 . + 0 ID=cds-MCP9536318.1;Parent=gene-NND05_01885;Dbxref=NCBI_GP:MCP9536318.1;Name=MCP9536318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007903392.1;locus_tag=NND05_01885;product=ATP-binding protein;protein_id=MCP9536318.1;transl_table=11 JANDXE010000002.1 Genbank gene 158966 159109 . + . ID=gene-NND05_01890;Name=NND05_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01890 JANDXE010000002.1 GeneMarkS-2+ CDS 158966 159109 . + 0 ID=cds-MCP9536319.1;Parent=gene-NND05_01890;Dbxref=NCBI_GP:MCP9536319.1;Name=MCP9536319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01890;product=hypothetical protein;protein_id=MCP9536319.1;transl_table=11 JANDXE010000002.1 Genbank gene 159673 159855 . + . ID=gene-NND05_01895;Name=NND05_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01895 JANDXE010000002.1 GeneMarkS-2+ CDS 159673 159855 . + 0 ID=cds-MCP9536320.1;Parent=gene-NND05_01895;Dbxref=NCBI_GP:MCP9536320.1;Name=MCP9536320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01895;product=hypothetical protein;protein_id=MCP9536320.1;transl_table=11 JANDXE010000002.1 Genbank gene 159961 161577 . + . ID=gene-NND05_01900;Name=NND05_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01900 JANDXE010000002.1 Protein Homology CDS 159961 161577 . + 0 ID=cds-MCP9536321.1;Parent=gene-NND05_01900;Dbxref=NCBI_GP:MCP9536321.1;Name=MCP9536321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004329797.1;locus_tag=NND05_01900;product=SAM-dependent methyltransferase;protein_id=MCP9536321.1;transl_table=11 JANDXE010000002.1 Genbank gene 161564 162688 . + . ID=gene-NND05_01905;Name=NND05_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01905 JANDXE010000002.1 Protein Homology CDS 161564 162688 . + 0 ID=cds-MCP9536322.1;Parent=gene-NND05_01905;Dbxref=NCBI_GP:MCP9536322.1;Name=MCP9536322.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009137070.1;locus_tag=NND05_01905;product=restriction endonuclease subunit S;protein_id=MCP9536322.1;transl_table=11 JANDXE010000002.1 Genbank gene 162709 165966 . + . ID=gene-NND05_01910;Name=NND05_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01910 JANDXE010000002.1 Protein Homology CDS 162709 165966 . + 0 ID=cds-MCP9536323.1;Parent=gene-NND05_01910;Dbxref=NCBI_GP:MCP9536323.1;Name=MCP9536323.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004329800.1;locus_tag=NND05_01910;product=HsdR family type I site-specific deoxyribonuclease;protein_id=MCP9536323.1;transl_table=11 JANDXE010000002.1 Genbank gene 166007 166339 . + . ID=gene-NND05_01915;Name=NND05_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01915 JANDXE010000002.1 GeneMarkS-2+ CDS 166007 166339 . + 0 ID=cds-MCP9536324.1;Parent=gene-NND05_01915;Dbxref=NCBI_GP:MCP9536324.1;Name=MCP9536324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01915;product=hypothetical protein;protein_id=MCP9536324.1;transl_table=11 JANDXE010000002.1 Genbank gene 166510 166944 . + . ID=gene-NND05_01920;Name=NND05_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01920 JANDXE010000002.1 GeneMarkS-2+ CDS 166510 166944 . + 0 ID=cds-MCP9536325.1;Parent=gene-NND05_01920;Dbxref=NCBI_GP:MCP9536325.1;Name=MCP9536325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01920;product=hypothetical protein;protein_id=MCP9536325.1;transl_table=11 JANDXE010000002.1 Genbank gene 167159 167311 . + . ID=gene-NND05_01925;Name=NND05_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01925 JANDXE010000002.1 GeneMarkS-2+ CDS 167159 167311 . + 0 ID=cds-MCP9536326.1;Parent=gene-NND05_01925;Dbxref=NCBI_GP:MCP9536326.1;Name=MCP9536326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01925;product=hypothetical protein;protein_id=MCP9536326.1;transl_table=11 JANDXE010000002.1 Genbank gene 167457 167798 . + . ID=gene-NND05_01930;Name=NND05_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01930 JANDXE010000002.1 GeneMarkS-2+ CDS 167457 167798 . + 0 ID=cds-MCP9536327.1;Parent=gene-NND05_01930;Dbxref=NCBI_GP:MCP9536327.1;Name=MCP9536327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_01930;product=hypothetical protein;protein_id=MCP9536327.1;transl_table=11 JANDXE010000002.1 Genbank gene 168375 169484 . + . ID=gene-NND05_01935;Name=NND05_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01935 JANDXE010000002.1 Protein Homology CDS 168375 169484 . + 0 ID=cds-MCP9536328.1;Parent=gene-NND05_01935;Dbxref=NCBI_GP:MCP9536328.1;Name=MCP9536328.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848883.1;locus_tag=NND05_01935;product=phage antirepressor KilAC domain-containing protein;protein_id=MCP9536328.1;transl_table=11 JANDXE010000002.1 Genbank gene 169560 172340 . + . ID=gene-NND05_01940;Name=NND05_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01940 JANDXE010000002.1 Protein Homology CDS 169560 172340 . + 0 ID=cds-MCP9536329.1;Parent=gene-NND05_01940;Dbxref=NCBI_GP:MCP9536329.1;Name=MCP9536329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849331.1;locus_tag=NND05_01940;product=hypothetical protein;protein_id=MCP9536329.1;transl_table=11 JANDXE010000002.1 Genbank gene 172351 172914 . + . ID=gene-NND05_01945;Name=NND05_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01945 JANDXE010000002.1 Protein Homology CDS 172351 172914 . + 0 ID=cds-MCP9536330.1;Parent=gene-NND05_01945;Dbxref=NCBI_GP:MCP9536330.1;Name=MCP9536330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846453.1;locus_tag=NND05_01945;product=DUF5675 family protein;protein_id=MCP9536330.1;transl_table=11 JANDXE010000002.1 Genbank gene 173077 173352 . + . ID=gene-NND05_01950;Name=NND05_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01950 JANDXE010000002.1 Protein Homology CDS 173077 173352 . + 0 ID=cds-MCP9536331.1;Parent=gene-NND05_01950;Dbxref=NCBI_GP:MCP9536331.1;Name=MCP9536331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005834527.1;locus_tag=NND05_01950;product=lysine exporter LysO family protein;protein_id=MCP9536331.1;transl_table=11 JANDXE010000002.1 Genbank gene 173349 173951 . + . ID=gene-NND05_01955;Name=NND05_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01955 JANDXE010000002.1 Protein Homology CDS 173349 173951 . + 0 ID=cds-MCP9536332.1;Parent=gene-NND05_01955;Dbxref=NCBI_GP:MCP9536332.1;Name=MCP9536332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292578.1;locus_tag=NND05_01955;product=lysine exporter LysO family protein;protein_id=MCP9536332.1;transl_table=11 JANDXE010000002.1 Genbank gene 173985 177056 . - . ID=gene-NND05_01960;Name=NND05_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01960 JANDXE010000002.1 Protein Homology CDS 173985 177056 . - 0 ID=cds-MCP9536333.1;Parent=gene-NND05_01960;Dbxref=NCBI_GP:MCP9536333.1;Name=MCP9536333.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435662.1;locus_tag=NND05_01960;product=tetratricopeptide repeat protein;protein_id=MCP9536333.1;transl_table=11 JANDXE010000002.1 Genbank gene 177062 177880 . - . ID=gene-NND05_01965;Name=NND05_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01965 JANDXE010000002.1 Protein Homology CDS 177062 177880 . - 0 ID=cds-MCP9536334.1;Parent=gene-NND05_01965;Dbxref=NCBI_GP:MCP9536334.1;Name=MCP9536334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237458.1;locus_tag=NND05_01965;product=metal ABC transporter permease;protein_id=MCP9536334.1;transl_table=11 JANDXE010000002.1 Genbank gene 177958 178341 . - . ID=gene-NND05_01970;Name=NND05_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01970 JANDXE010000002.1 Protein Homology CDS 177958 178341 . - 0 ID=cds-MCP9536335.1;Parent=gene-NND05_01970;Dbxref=NCBI_GP:MCP9536335.1;Name=MCP9536335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849051.1;locus_tag=NND05_01970;product=hypothetical protein;protein_id=MCP9536335.1;transl_table=11 JANDXE010000002.1 Genbank gene 178362 179603 . - . ID=gene-NND05_01975;Name=NND05_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01975 JANDXE010000002.1 Protein Homology CDS 178362 179603 . - 0 ID=cds-MCP9536336.1;Parent=gene-NND05_01975;Dbxref=NCBI_GP:MCP9536336.1;Name=MCP9536336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849052.1;locus_tag=NND05_01975;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MCP9536336.1;transl_table=11 JANDXE010000002.1 Genbank gene 179991 180497 . + . ID=gene-NND05_01980;Name=NND05_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01980 JANDXE010000002.1 Protein Homology CDS 179991 180497 . + 0 ID=cds-MCP9536337.1;Parent=gene-NND05_01980;Dbxref=NCBI_GP:MCP9536337.1;Name=MCP9536337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343530.1;locus_tag=NND05_01980;product=hypothetical protein;protein_id=MCP9536337.1;transl_table=11 JANDXE010000002.1 Genbank gene 180689 181441 . - . ID=gene-NND05_01985;Name=NND05_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01985 JANDXE010000002.1 Protein Homology CDS 180689 181441 . - 0 ID=cds-MCP9536338.1;Parent=gene-NND05_01985;Dbxref=NCBI_GP:MCP9536338.1;Name=MCP9536338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377021.1;locus_tag=NND05_01985;product=exodeoxyribonuclease III;protein_id=MCP9536338.1;transl_table=11 JANDXE010000002.1 Genbank gene 181458 182051 . - . ID=gene-NND05_01990;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=NND05_01990 JANDXE010000002.1 Protein Homology CDS 181458 182051 . - 0 ID=cds-MCP9536339.1;Parent=gene-NND05_01990;Dbxref=NCBI_GP:MCP9536339.1;Name=MCP9536339.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352441.1;locus_tag=NND05_01990;product=GTP cyclohydrolase I FolE;protein_id=MCP9536339.1;transl_table=11 JANDXE010000002.1 Genbank gene 182117 182830 . - . ID=gene-NND05_01995;Name=NND05_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_01995 JANDXE010000002.1 Protein Homology CDS 182117 182830 . - 0 ID=cds-MCP9536340.1;Parent=gene-NND05_01995;Dbxref=NCBI_GP:MCP9536340.1;Name=MCP9536340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377018.1;locus_tag=NND05_01995;product=SPOR domain-containing protein;protein_id=MCP9536340.1;transl_table=11 JANDXE010000002.1 Genbank gene 182969 185053 . - . ID=gene-NND05_02000;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NND05_02000 JANDXE010000002.1 Protein Homology CDS 182969 185053 . - 0 ID=cds-MCP9536341.1;Parent=gene-NND05_02000;Dbxref=NCBI_GP:MCP9536341.1;Name=MCP9536341.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565390.1;locus_tag=NND05_02000;product=triose-phosphate isomerase;protein_id=MCP9536341.1;transl_table=11 JANDXE010000002.1 Genbank gene 185101 185649 . - . ID=gene-NND05_02005;Name=NND05_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02005 JANDXE010000002.1 Protein Homology CDS 185101 185649 . - 0 ID=cds-MCP9536342.1;Parent=gene-NND05_02005;Dbxref=NCBI_GP:MCP9536342.1;Name=MCP9536342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849061.1;locus_tag=NND05_02005;product=DUF1599 domain-containing protein;protein_id=MCP9536342.1;transl_table=11 JANDXE010000002.1 Genbank gene 185836 187284 . + . ID=gene-NND05_02010;Name=NND05_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02010 JANDXE010000002.1 Protein Homology CDS 185836 187284 . + 0 ID=cds-MCP9536343.1;Parent=gene-NND05_02010;Dbxref=NCBI_GP:MCP9536343.1;Name=MCP9536343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849062.1;locus_tag=NND05_02010;product=CCA tRNA nucleotidyltransferase;protein_id=MCP9536343.1;transl_table=11 JANDXE010000002.1 Genbank gene 187443 188654 . + . ID=gene-NND05_02015;Name=NND05_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02015 JANDXE010000002.1 Protein Homology CDS 187443 188654 . + 0 ID=cds-MCP9536344.1;Parent=gene-NND05_02015;Dbxref=NCBI_GP:MCP9536344.1;Name=MCP9536344.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849063.1;locus_tag=NND05_02015;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9536344.1;transl_table=11 JANDXE010000002.1 Genbank gene 188688 191951 . + . ID=gene-NND05_02020;Name=NND05_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02020 JANDXE010000002.1 Protein Homology CDS 188688 191951 . + 0 ID=cds-MCP9536345.1;Parent=gene-NND05_02020;Dbxref=NCBI_GP:MCP9536345.1;Name=MCP9536345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849064.1;locus_tag=NND05_02020;product=efflux RND transporter permease subunit;protein_id=MCP9536345.1;transl_table=11 JANDXE010000002.1 Genbank gene 191979 193373 . + . ID=gene-NND05_02025;Name=NND05_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02025 JANDXE010000002.1 Protein Homology CDS 191979 193373 . + 0 ID=cds-MCP9536346.1;Parent=gene-NND05_02025;Dbxref=NCBI_GP:MCP9536346.1;Name=MCP9536346.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920468.1;locus_tag=NND05_02025;product=efflux transporter outer membrane subunit;protein_id=MCP9536346.1;transl_table=11 JANDXE010000002.1 Genbank gene 193404 194186 . + . ID=gene-NND05_02030;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NND05_02030 JANDXE010000002.1 Protein Homology CDS 193404 194186 . + 0 ID=cds-MCP9536347.1;Parent=gene-NND05_02030;Dbxref=NCBI_GP:MCP9536347.1;Name=MCP9536347.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966989.1;locus_tag=NND05_02030;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=MCP9536347.1;transl_table=11 JANDXE010000002.1 Genbank gene 194702 195580 . + . ID=gene-NND05_02035;Name=NND05_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02035 JANDXE010000002.1 Protein Homology CDS 194702 195580 . + 0 ID=cds-MCP9536348.1;Parent=gene-NND05_02035;Dbxref=NCBI_GP:MCP9536348.1;Name=MCP9536348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371658.1;locus_tag=NND05_02035;product=permease-like cell division protein FtsX;protein_id=MCP9536348.1;transl_table=11 JANDXE010000002.1 Genbank gene 195607 195834 . + . ID=gene-NND05_02040;Name=NND05_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02040 JANDXE010000002.1 Protein Homology CDS 195607 195834 . + 0 ID=cds-MCP9536349.1;Parent=gene-NND05_02040;Dbxref=NCBI_GP:MCP9536349.1;Name=MCP9536349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901917.1;locus_tag=NND05_02040;product=DUF3098 domain-containing protein;protein_id=MCP9536349.1;transl_table=11 JANDXE010000002.1 Genbank gene 195919 196716 . + . ID=gene-NND05_02045;Name=NND05_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02045 JANDXE010000002.1 Protein Homology CDS 195919 196716 . + 0 ID=cds-MCP9536350.1;Parent=gene-NND05_02045;Dbxref=NCBI_GP:MCP9536350.1;Name=MCP9536350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901915.1;locus_tag=NND05_02045;product=undecaprenyl-diphosphate phosphatase;protein_id=MCP9536350.1;transl_table=11 JANDXE010000002.1 Genbank gene 196720 197433 . + . ID=gene-NND05_02050;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NND05_02050 JANDXE010000002.1 Protein Homology CDS 196720 197433 . + 0 ID=cds-MCP9536351.1;Parent=gene-NND05_02050;Dbxref=NCBI_GP:MCP9536351.1;Name=MCP9536351.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009231375.1;locus_tag=NND05_02050;product=tRNA pseudouridine(55) synthase TruB;protein_id=MCP9536351.1;transl_table=11 JANDXE010000002.1 Genbank gene 197496 198680 . + . ID=gene-NND05_02055;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=NND05_02055 JANDXE010000002.1 Protein Homology CDS 197496 198680 . + 0 ID=cds-MCP9536352.1;Parent=gene-NND05_02055;Dbxref=NCBI_GP:MCP9536352.1;Name=MCP9536352.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342901.1;locus_tag=NND05_02055;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=MCP9536352.1;transl_table=11 JANDXE010000002.1 Genbank gene 198776 199180 . + . ID=gene-NND05_02060;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NND05_02060 JANDXE010000002.1 Protein Homology CDS 198776 199180 . + 0 ID=cds-MCP9536353.1;Parent=gene-NND05_02060;Dbxref=NCBI_GP:MCP9536353.1;Name=MCP9536353.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342900.1;locus_tag=NND05_02060;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=MCP9536353.1;transl_table=11 JANDXE010000002.1 Genbank gene 199355 200458 . - . ID=gene-NND05_02065;Name=NND05_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02065 JANDXE010000002.1 Protein Homology CDS 199355 200458 . - 0 ID=cds-MCP9536354.1;Parent=gene-NND05_02065;Dbxref=NCBI_GP:MCP9536354.1;Name=MCP9536354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021349.2;locus_tag=NND05_02065;product=AAA family ATPase;protein_id=MCP9536354.1;transl_table=11 JANDXE010000002.1 Genbank gene 200838 201749 . + . ID=gene-NND05_02070;Name=NND05_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02070 JANDXE010000002.1 GeneMarkS-2+ CDS 200838 201749 . + 0 ID=cds-MCP9536355.1;Parent=gene-NND05_02070;Dbxref=NCBI_GP:MCP9536355.1;Name=MCP9536355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02070;product=hypothetical protein;protein_id=MCP9536355.1;transl_table=11 JANDXE010000002.1 Genbank gene 201849 202118 . - . ID=gene-NND05_02075;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NND05_02075 JANDXE010000002.1 Protein Homology CDS 201849 202118 . - 0 ID=cds-MCP9536356.1;Parent=gene-NND05_02075;Dbxref=NCBI_GP:MCP9536356.1;Name=MCP9536356.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134494.1;locus_tag=NND05_02075;product=30S ribosomal protein S15;protein_id=MCP9536356.1;transl_table=11 JANDXE010000002.1 Genbank gene 202298 204100 . + . ID=gene-NND05_02080;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NND05_02080 JANDXE010000002.1 Protein Homology CDS 202298 204100 . + 0 ID=cds-MCP9536357.1;Parent=gene-NND05_02080;Dbxref=NCBI_GP:MCP9536357.1;Name=MCP9536357.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012324.1;locus_tag=NND05_02080;product=translational GTPase TypA;protein_id=MCP9536357.1;transl_table=11 JANDXE010000002.1 Genbank gene 204197 205159 . + . ID=gene-NND05_02085;Name=NND05_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02085 JANDXE010000002.1 Protein Homology CDS 204197 205159 . + 0 ID=cds-MCP9536358.1;Parent=gene-NND05_02085;Dbxref=NCBI_GP:MCP9536358.1;Name=MCP9536358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009229348.1;locus_tag=NND05_02085;product=transporter;protein_id=MCP9536358.1;transl_table=11 JANDXE010000002.1 Genbank gene 205257 206120 . - . ID=gene-NND05_02090;Name=NND05_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02090 JANDXE010000002.1 GeneMarkS-2+ CDS 205257 206120 . - 0 ID=cds-MCP9536359.1;Parent=gene-NND05_02090;Dbxref=NCBI_GP:MCP9536359.1;Name=MCP9536359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02090;product=hypothetical protein;protein_id=MCP9536359.1;transl_table=11 JANDXE010000002.1 Genbank gene 206188 207705 . - . ID=gene-NND05_02095;Name=NND05_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02095 JANDXE010000002.1 Protein Homology CDS 206188 207705 . - 0 ID=cds-MCP9536360.1;Parent=gene-NND05_02095;Dbxref=NCBI_GP:MCP9536360.1;Name=MCP9536360.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359196.1;locus_tag=NND05_02095;product=alpha-L-fucosidase;protein_id=MCP9536360.1;transl_table=11 JANDXE010000002.1 Genbank gene 207898 208383 . - . ID=gene-NND05_02100;Name=NND05_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02100 JANDXE010000002.1 Protein Homology CDS 207898 208383 . - 0 ID=cds-MCP9536361.1;Parent=gene-NND05_02100;Dbxref=NCBI_GP:MCP9536361.1;Name=MCP9536361.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383851.1;locus_tag=NND05_02100;product=S-ribosylhomocysteine lyase;protein_id=MCP9536361.1;transl_table=11 JANDXE010000002.1 Genbank gene 208410 209108 . - . ID=gene-NND05_02105;Name=NND05_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02105 JANDXE010000002.1 Protein Homology CDS 208410 209108 . - 0 ID=cds-MCP9536362.1;Parent=gene-NND05_02105;Dbxref=NCBI_GP:MCP9536362.1;Name=MCP9536362.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342892.1;locus_tag=NND05_02105;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MCP9536362.1;transl_table=11 JANDXE010000002.1 Genbank gene 209224 210096 . - . ID=gene-NND05_02110;Name=NND05_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02110 JANDXE010000002.1 Protein Homology CDS 209224 210096 . - 0 ID=cds-MCP9536363.1;Parent=gene-NND05_02110;Dbxref=NCBI_GP:MCP9536363.1;Name=MCP9536363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174607.1;locus_tag=NND05_02110;product=ChaN family lipoprotein;protein_id=MCP9536363.1;transl_table=11 JANDXE010000002.1 Genbank gene 210121 212757 . - . ID=gene-NND05_02115;Name=NND05_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02115 JANDXE010000002.1 Protein Homology CDS 210121 212757 . - 0 ID=cds-MCP9536364.1;Parent=gene-NND05_02115;Dbxref=NCBI_GP:MCP9536364.1;Name=MCP9536364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=NND05_02115;product=insulinase family protein;protein_id=MCP9536364.1;transl_table=11 JANDXE010000002.1 Genbank gene 212975 214198 . - . ID=gene-NND05_02120;Name=NND05_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02120 JANDXE010000002.1 Protein Homology CDS 212975 214198 . - 0 ID=cds-MCP9536365.1;Parent=gene-NND05_02120;Dbxref=NCBI_GP:MCP9536365.1;Name=MCP9536365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027607.2;locus_tag=NND05_02120;product=DUF4929 domain-containing protein;protein_id=MCP9536365.1;transl_table=11 JANDXE010000002.1 Genbank gene 214224 215615 . - . ID=gene-NND05_02125;Name=NND05_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02125 JANDXE010000002.1 Protein Homology CDS 214224 215615 . - 0 ID=cds-MCP9536366.1;Parent=gene-NND05_02125;Dbxref=NCBI_GP:MCP9536366.1;Name=MCP9536366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967928.1;locus_tag=NND05_02125;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536366.1;transl_table=11 JANDXE010000002.1 Genbank gene 215621 218611 . - . ID=gene-NND05_02130;Name=NND05_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02130 JANDXE010000002.1 Protein Homology CDS 215621 218611 . - 0 ID=cds-MCP9536367.1;Parent=gene-NND05_02130;Dbxref=NCBI_GP:MCP9536367.1;Name=MCP9536367.1;Ontology_term=GO:0071702,GO:0022857,GO:0045203;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=organic substance transport|0071702||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566122.1;locus_tag=NND05_02130;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=MCP9536367.1;transl_table=11 JANDXE010000002.1 Genbank gene 219070 219747 . - . ID=gene-NND05_02135;Name=NND05_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02135 JANDXE010000002.1 Protein Homology CDS 219070 219747 . - 0 ID=cds-MCP9536368.1;Parent=gene-NND05_02135;Dbxref=NCBI_GP:MCP9536368.1;Name=MCP9536368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900534.1;locus_tag=NND05_02135;product=PorT family protein;protein_id=MCP9536368.1;transl_table=11 JANDXE010000002.1 Genbank gene 219949 222459 . + . ID=gene-NND05_02140;Name=NND05_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02140 JANDXE010000002.1 Protein Homology CDS 219949 222459 . + 0 ID=cds-MCP9536369.1;Parent=gene-NND05_02140;Dbxref=NCBI_GP:MCP9536369.1;Name=MCP9536369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134474.1;locus_tag=NND05_02140;product=YfhO family protein;protein_id=MCP9536369.1;transl_table=11 JANDXE010000002.1 Genbank gene 222437 223279 . + . ID=gene-NND05_02145;Name=NND05_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02145 JANDXE010000002.1 Protein Homology CDS 222437 223279 . + 0 ID=cds-MCP9536370.1;Parent=gene-NND05_02145;Dbxref=NCBI_GP:MCP9536370.1;Name=MCP9536370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008124215.1;locus_tag=NND05_02145;product=GSCFA domain-containing protein;protein_id=MCP9536370.1;transl_table=11 JANDXE010000002.1 Genbank gene 223322 225799 . + . ID=gene-NND05_02150;Name=NND05_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02150 JANDXE010000002.1 Protein Homology CDS 223322 225799 . + 0 ID=cds-MCP9536371.1;Parent=gene-NND05_02150;Dbxref=NCBI_GP:MCP9536371.1;Name=MCP9536371.1;Ontology_term=GO:0006522,GO:0009058,GO:0005524,GO:0008784,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,alanine racemase activity|0008784||IEA,ligase activity|0016874||IEA;go_process=alanine metabolic process|0006522||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412182.1;locus_tag=NND05_02150;product=bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase;protein_id=MCP9536371.1;transl_table=11 JANDXE010000002.1 Genbank pseudogene 226064 226326 . + . ID=gene-NND05_02155;Name=NND05_02155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_02155;pseudo=true JANDXE010000002.1 Protein Homology CDS 226064 226326 . + 0 ID=cds-NND05_02155;Parent=gene-NND05_02155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004289144.1;locus_tag=NND05_02155;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 JANDXE010000002.1 Genbank pseudogene 226348 226890 . + . ID=gene-NND05_02160;Name=NND05_02160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_02160;pseudo=true JANDXE010000002.1 Protein Homology CDS 226348 226890 . + 0 ID=cds-NND05_02160;Parent=gene-NND05_02160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565553.1;locus_tag=NND05_02160;product=5-deoxy-glucuronate isomerase;pseudo=true;transl_table=11 JANDXE010000002.1 Genbank gene 226911 228383 . + . ID=gene-NND05_02165;Name=NND05_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02165 JANDXE010000002.1 Protein Homology CDS 226911 228383 . + 0 ID=cds-MCP9536372.1;Parent=gene-NND05_02165;Dbxref=NCBI_GP:MCP9536372.1;Name=MCP9536372.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342882.1;locus_tag=NND05_02165;product=MFS transporter;protein_id=MCP9536372.1;transl_table=11 JANDXE010000002.1 Genbank gene 228629 232117 . + . ID=gene-NND05_02170;Name=NND05_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02170 JANDXE010000002.1 Protein Homology CDS 228629 232117 . + 0 ID=cds-MCP9536373.1;Parent=gene-NND05_02170;Dbxref=NCBI_GP:MCP9536373.1;Name=MCP9536373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952817.1;locus_tag=NND05_02170;product=discoidin domain-containing protein;protein_id=MCP9536373.1;transl_table=11 JANDXE010000002.1 Genbank gene 232340 232510 . - . ID=gene-NND05_02175;Name=NND05_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02175 JANDXE010000002.1 Protein Homology CDS 232340 232510 . - 0 ID=cds-MCP9536374.1;Parent=gene-NND05_02175;Dbxref=NCBI_GP:MCP9536374.1;Name=MCP9536374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025126.2;locus_tag=NND05_02175;product=transposase;protein_id=MCP9536374.1;transl_table=11 JANDXE010000002.1 Genbank gene 232525 233250 . - . ID=gene-NND05_02180;Name=NND05_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02180 JANDXE010000002.1 Protein Homology CDS 232525 233250 . - 0 ID=cds-MCP9536375.1;Parent=gene-NND05_02180;Dbxref=NCBI_GP:MCP9536375.1;Name=MCP9536375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=NND05_02180;product=transposase;protein_id=MCP9536375.1;transl_table=11 JANDXE010000002.1 Genbank gene 233482 234381 . - . ID=gene-NND05_02185;Name=NND05_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02185 JANDXE010000002.1 Protein Homology CDS 233482 234381 . - 0 ID=cds-MCP9536376.1;Parent=gene-NND05_02185;Dbxref=NCBI_GP:MCP9536376.1;Name=MCP9536376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027647.2;locus_tag=NND05_02185;product=DUF4959 domain-containing protein;protein_id=MCP9536376.1;transl_table=11 JANDXE010000002.1 Genbank gene 234413 236383 . - . ID=gene-NND05_02190;Name=NND05_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02190 JANDXE010000002.1 Protein Homology CDS 234413 236383 . - 0 ID=cds-MCP9536377.1;Parent=gene-NND05_02190;Dbxref=NCBI_GP:MCP9536377.1;Name=MCP9536377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005803016.1;locus_tag=NND05_02190;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536377.1;transl_table=11 JANDXE010000002.1 Genbank gene 236391 239606 . - . ID=gene-NND05_02195;Name=NND05_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02195 JANDXE010000002.1 Protein Homology CDS 236391 239606 . - 0 ID=cds-MCP9536378.1;Parent=gene-NND05_02195;Dbxref=NCBI_GP:MCP9536378.1;Name=MCP9536378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007576245.1;locus_tag=NND05_02195;product=TonB-dependent receptor;protein_id=MCP9536378.1;transl_table=11 JANDXE010000002.1 Genbank gene 240164 240256 . - . ID=gene-NND05_02200;Name=NND05_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02200 JANDXE010000002.1 Protein Homology CDS 240164 240256 . - 0 ID=cds-MCP9536379.1;Parent=gene-NND05_02200;Dbxref=NCBI_GP:MCP9536379.1;Name=MCP9536379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015310466.1;locus_tag=NND05_02200;product=smalltalk protein;protein_id=MCP9536379.1;transl_table=11 JANDXE010000002.1 Genbank gene 240269 240898 . - . ID=gene-NND05_02205;Name=NND05_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02205 JANDXE010000002.1 Protein Homology CDS 240269 240898 . - 0 ID=cds-MCP9536380.1;Parent=gene-NND05_02205;Dbxref=NCBI_GP:MCP9536380.1;Name=MCP9536380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846604.1;locus_tag=NND05_02205;product=DNA-binding protein;protein_id=MCP9536380.1;transl_table=11 JANDXE010000002.1 Genbank gene 241032 242090 . - . ID=gene-NND05_02210;Name=NND05_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02210 JANDXE010000002.1 GeneMarkS-2+ CDS 241032 242090 . - 0 ID=cds-MCP9536381.1;Parent=gene-NND05_02210;Dbxref=NCBI_GP:MCP9536381.1;Name=MCP9536381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02210;product=hypothetical protein;protein_id=MCP9536381.1;transl_table=11 JANDXE010000002.1 Genbank gene 242895 243335 . + . ID=gene-NND05_02215;Name=NND05_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02215 JANDXE010000002.1 Protein Homology CDS 242895 243335 . + 0 ID=cds-MCP9536382.1;Parent=gene-NND05_02215;Dbxref=NCBI_GP:MCP9536382.1;Name=MCP9536382.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846248.1;locus_tag=NND05_02215;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9536382.1;transl_table=11 JANDXE010000002.1 Genbank gene 243419 243645 . + . ID=gene-NND05_02220;Name=NND05_02220;end_range=243645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02220;partial=true JANDXE010000002.1 Protein Homology CDS 243419 243645 . + 0 ID=cds-MCP9536383.1;Parent=gene-NND05_02220;Dbxref=NCBI_GP:MCP9536383.1;Name=MCP9536383.1;end_range=243645,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_02220;partial=true;product=DUF4248 domain-containing protein;protein_id=MCP9536383.1;transl_table=11 ##sequence-region JANDXE010000031.1 1 35522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000031.1 Genbank region 1 35522 . + . ID=JANDXE010000031.1:1..35522;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000031.1 Genbank gene 1 84 . + . ID=gene-NND05_12760;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_12760;partial=true;start_range=.,1 JANDXE010000031.1 cmsearch rRNA 1 84 . + . ID=rna-NND05_12760;Parent=gene-NND05_12760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12760;partial=true;product=5S ribosomal RNA;start_range=.,1 JANDXE010000031.1 cmsearch exon 1 84 . + . ID=exon-NND05_12760-1;Parent=rna-NND05_12760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_12760;partial=true;product=5S ribosomal RNA;start_range=.,1 JANDXE010000031.1 Genbank gene 214 2346 . + . ID=gene-NND05_12765;Name=NND05_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12765 JANDXE010000031.1 Protein Homology CDS 214 2346 . + 0 ID=cds-MCP9538399.1;Parent=gene-NND05_12765;Dbxref=NCBI_GP:MCP9538399.1;Name=MCP9538399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848512.1;locus_tag=NND05_12765;product=RNA-binding transcriptional accessory protein;protein_id=MCP9538399.1;transl_table=11 JANDXE010000031.1 Genbank gene 2448 2693 . + . ID=gene-NND05_12770;Name=NND05_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12770 JANDXE010000031.1 Protein Homology CDS 2448 2693 . + 0 ID=cds-MCP9538400.1;Parent=gene-NND05_12770;Dbxref=NCBI_GP:MCP9538400.1;Name=MCP9538400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361186.1;locus_tag=NND05_12770;product=hypothetical protein;protein_id=MCP9538400.1;transl_table=11 JANDXE010000031.1 Genbank gene 2699 6565 . - . ID=gene-NND05_12775;Name=NND05_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12775 JANDXE010000031.1 Protein Homology CDS 2699 6565 . - 0 ID=cds-MCP9538401.1;Parent=gene-NND05_12775;Dbxref=NCBI_GP:MCP9538401.1;Name=MCP9538401.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.2;locus_tag=NND05_12775;product=ATP-binding protein;protein_id=MCP9538401.1;transl_table=11 JANDXE010000031.1 Genbank gene 6756 7787 . + . ID=gene-NND05_12780;Name=NND05_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12780 JANDXE010000031.1 Protein Homology CDS 6756 7787 . + 0 ID=cds-MCP9538402.1;Parent=gene-NND05_12780;Dbxref=NCBI_GP:MCP9538402.1;Name=MCP9538402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848173.1;locus_tag=NND05_12780;product=alcohol dehydrogenase;protein_id=MCP9538402.1;transl_table=11 JANDXE010000031.1 Genbank gene 7927 8460 . - . ID=gene-NND05_12785;Name=NND05_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12785 JANDXE010000031.1 Protein Homology CDS 7927 8460 . - 0 ID=cds-MCP9538403.1;Parent=gene-NND05_12785;Dbxref=NCBI_GP:MCP9538403.1;Name=MCP9538403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369678.1;locus_tag=NND05_12785;product=porin family protein;protein_id=MCP9538403.1;transl_table=11 JANDXE010000031.1 Genbank gene 8731 8812 . - . ID=gene-NND05_12790;Name=NND05_12790;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_12790 JANDXE010000031.1 tRNAscan-SE tRNA 8731 8812 . - . ID=rna-NND05_12790;Parent=gene-NND05_12790;anticodon=(pos:complement(8776..8778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12790;product=tRNA-Leu JANDXE010000031.1 tRNAscan-SE exon 8731 8812 . - . ID=exon-NND05_12790-1;Parent=rna-NND05_12790;anticodon=(pos:complement(8776..8778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_12790;product=tRNA-Leu JANDXE010000031.1 Genbank gene 8975 10252 . + . ID=gene-NND05_12795;Name=NND05_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12795 JANDXE010000031.1 Protein Homology CDS 8975 10252 . + 0 ID=cds-MCP9538404.1;Parent=gene-NND05_12795;Dbxref=NCBI_GP:MCP9538404.1;Name=MCP9538404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848491.1;locus_tag=NND05_12795;product=histidine phosphatase family protein;protein_id=MCP9538404.1;transl_table=11 JANDXE010000031.1 Genbank gene 10357 13170 . - . ID=gene-NND05_12800;Name=NND05_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12800 JANDXE010000031.1 Protein Homology CDS 10357 13170 . - 0 ID=cds-MCP9538405.1;Parent=gene-NND05_12800;Dbxref=NCBI_GP:MCP9538405.1;Name=MCP9538405.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848489.1;locus_tag=NND05_12800;product=DNA gyrase/topoisomerase IV subunit A;protein_id=MCP9538405.1;transl_table=11 JANDXE010000031.1 Genbank gene 13276 14838 . + . ID=gene-NND05_12805;Name=NND05_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12805 JANDXE010000031.1 Protein Homology CDS 13276 14838 . + 0 ID=cds-MCP9538406.1;Parent=gene-NND05_12805;Dbxref=NCBI_GP:MCP9538406.1;Name=MCP9538406.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848488.1;locus_tag=NND05_12805;product=glycine--tRNA ligase;protein_id=MCP9538406.1;transl_table=11 JANDXE010000031.1 Genbank gene 14819 15517 . + . ID=gene-NND05_12810;Name=NND05_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12810 JANDXE010000031.1 Protein Homology CDS 14819 15517 . + 0 ID=cds-MCP9538407.1;Parent=gene-NND05_12810;Dbxref=NCBI_GP:MCP9538407.1;Name=MCP9538407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012478.2;locus_tag=NND05_12810;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9538407.1;transl_table=11 JANDXE010000031.1 Genbank gene 16072 17451 . + . ID=gene-NND05_12815;Name=NND05_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12815 JANDXE010000031.1 Protein Homology CDS 16072 17451 . + 0 ID=cds-MCP9538408.1;Parent=gene-NND05_12815;Dbxref=NCBI_GP:MCP9538408.1;Name=MCP9538408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844807.1;locus_tag=NND05_12815;product=MATE family efflux transporter;protein_id=MCP9538408.1;transl_table=11 JANDXE010000031.1 Genbank gene 17575 20394 . + . ID=gene-NND05_12820;Name=NND05_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12820 JANDXE010000031.1 Protein Homology CDS 17575 20394 . + 0 ID=cds-MCP9538409.1;Parent=gene-NND05_12820;Dbxref=NCBI_GP:MCP9538409.1;Name=MCP9538409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848484.1;locus_tag=NND05_12820;product=insulinase family protein;protein_id=MCP9538409.1;transl_table=11 JANDXE010000031.1 Genbank gene 20955 21647 . + . ID=gene-NND05_12825;Name=NND05_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12825 JANDXE010000031.1 Protein Homology CDS 20955 21647 . + 0 ID=cds-MCP9538410.1;Parent=gene-NND05_12825;Dbxref=NCBI_GP:MCP9538410.1;Name=MCP9538410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027595.2;locus_tag=NND05_12825;product=DUF4923 family protein;protein_id=MCP9538410.1;transl_table=11 JANDXE010000031.1 Genbank gene 21840 22022 . - . ID=gene-NND05_12830;Name=NND05_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12830 JANDXE010000031.1 Protein Homology CDS 21840 22022 . - 0 ID=cds-MCP9538411.1;Parent=gene-NND05_12830;Dbxref=NCBI_GP:MCP9538411.1;Name=MCP9538411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027479.2;locus_tag=NND05_12830;product=hypothetical protein;protein_id=MCP9538411.1;transl_table=11 JANDXE010000031.1 Genbank gene 22046 22792 . - . ID=gene-NND05_12835;Name=NND05_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12835 JANDXE010000031.1 Protein Homology CDS 22046 22792 . - 0 ID=cds-MCP9538412.1;Parent=gene-NND05_12835;Dbxref=NCBI_GP:MCP9538412.1;Name=MCP9538412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848476.1;locus_tag=NND05_12835;product=peptidylprolyl isomerase;protein_id=MCP9538412.1;transl_table=11 JANDXE010000031.1 Genbank gene 22867 23238 . - . ID=gene-NND05_12840;Name=NND05_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12840 JANDXE010000031.1 Protein Homology CDS 22867 23238 . - 0 ID=cds-MCP9538413.1;Parent=gene-NND05_12840;Dbxref=NCBI_GP:MCP9538413.1;Name=MCP9538413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013184.1;locus_tag=NND05_12840;product=hypothetical protein;protein_id=MCP9538413.1;transl_table=11 JANDXE010000031.1 Genbank gene 23319 24173 . - . ID=gene-NND05_12845;Name=NND05_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12845 JANDXE010000031.1 Protein Homology CDS 23319 24173 . - 0 ID=cds-MCP9538414.1;Parent=gene-NND05_12845;Dbxref=NCBI_GP:MCP9538414.1;Name=MCP9538414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848474.1;locus_tag=NND05_12845;product=haloacid dehalogenase-like hydrolase;protein_id=MCP9538414.1;transl_table=11 JANDXE010000031.1 Genbank gene 24399 26306 . - . ID=gene-NND05_12850;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NND05_12850 JANDXE010000031.1 Protein Homology CDS 24399 26306 . - 0 ID=cds-MCP9538415.1;Parent=gene-NND05_12850;Dbxref=NCBI_GP:MCP9538415.1;Name=MCP9538415.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709568.1;locus_tag=NND05_12850;product=molecular chaperone DnaK;protein_id=MCP9538415.1;transl_table=11 JANDXE010000031.1 Genbank gene 26691 27722 . - . ID=gene-NND05_12855;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NND05_12855 JANDXE010000031.1 Protein Homology CDS 26691 27722 . - 0 ID=cds-MCP9538416.1;Parent=gene-NND05_12855;Dbxref=NCBI_GP:MCP9538416.1;Name=MCP9538416.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848471.1;locus_tag=NND05_12855;product=recombinase RecA;protein_id=MCP9538416.1;transl_table=11 JANDXE010000031.1 Genbank gene 27743 28984 . - . ID=gene-NND05_12860;Name=NND05_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12860 JANDXE010000031.1 Protein Homology CDS 27743 28984 . - 0 ID=cds-MCP9538417.1;Parent=gene-NND05_12860;Dbxref=NCBI_GP:MCP9538417.1;Name=MCP9538417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848470.1;locus_tag=NND05_12860;product=saccharopine dehydrogenase family protein;protein_id=MCP9538417.1;transl_table=11 JANDXE010000031.1 Genbank gene 29027 29635 . - . ID=gene-NND05_12865;Name=NND05_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12865 JANDXE010000031.1 Protein Homology CDS 29027 29635 . - 0 ID=cds-MCP9538418.1;Parent=gene-NND05_12865;Dbxref=NCBI_GP:MCP9538418.1;Name=MCP9538418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340031.1;locus_tag=NND05_12865;product=hypothetical protein;protein_id=MCP9538418.1;transl_table=11 JANDXE010000031.1 Genbank gene 29906 30286 . - . ID=gene-NND05_12870;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NND05_12870 JANDXE010000031.1 Protein Homology CDS 29906 30286 . - 0 ID=cds-MCP9538419.1;Parent=gene-NND05_12870;Dbxref=NCBI_GP:MCP9538419.1;Name=MCP9538419.1;Ontology_term=GO:1903424,GO:1903425,GO:0016021;gbkey=CDS;gene=crcB;go_component=integral component of membrane|0016021||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848468.1;locus_tag=NND05_12870;product=fluoride efflux transporter CrcB;protein_id=MCP9538419.1;transl_table=11 JANDXE010000031.1 Genbank gene 30328 31917 . - . ID=gene-NND05_12875;Name=NND05_12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12875 JANDXE010000031.1 Protein Homology CDS 30328 31917 . - 0 ID=cds-MCP9538420.1;Parent=gene-NND05_12875;Dbxref=NCBI_GP:MCP9538420.1;Name=MCP9538420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848291.1;locus_tag=NND05_12875;product=ATP-binding protein;protein_id=MCP9538420.1;transl_table=11 JANDXE010000031.1 Genbank gene 32106 32324 . + . ID=gene-NND05_12880;Name=NND05_12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12880 JANDXE010000031.1 GeneMarkS-2+ CDS 32106 32324 . + 0 ID=cds-MCP9538421.1;Parent=gene-NND05_12880;Dbxref=NCBI_GP:MCP9538421.1;Name=MCP9538421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12880;product=hypothetical protein;protein_id=MCP9538421.1;transl_table=11 JANDXE010000031.1 Genbank gene 32321 32728 . + . ID=gene-NND05_12885;Name=NND05_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12885 JANDXE010000031.1 GeneMarkS-2+ CDS 32321 32728 . + 0 ID=cds-MCP9538422.1;Parent=gene-NND05_12885;Dbxref=NCBI_GP:MCP9538422.1;Name=MCP9538422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12885;product=hypothetical protein;protein_id=MCP9538422.1;transl_table=11 JANDXE010000031.1 Genbank gene 32804 33280 . + . ID=gene-NND05_12890;Name=NND05_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12890 JANDXE010000031.1 Protein Homology CDS 32804 33280 . + 0 ID=cds-MCP9538423.1;Parent=gene-NND05_12890;Dbxref=NCBI_GP:MCP9538423.1;Name=MCP9538423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025032.2;locus_tag=NND05_12890;product=lipocalin family protein;protein_id=MCP9538423.1;transl_table=11 JANDXE010000031.1 Genbank gene 33439 35522 . + . ID=gene-NND05_12895;Name=NND05_12895;end_range=35522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12895;partial=true JANDXE010000031.1 Protein Homology CDS 33439 35522 . + 0 ID=cds-MCP9538424.1;Parent=gene-NND05_12895;Dbxref=NCBI_GP:MCP9538424.1;Name=MCP9538424.1;end_range=35522,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013995.2;locus_tag=NND05_12895;partial=true;product=EVE domain-containing protein;protein_id=MCP9538424.1;transl_table=11 ##sequence-region JANDXE010000032.1 1 33667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000032.1 Genbank region 1 33667 . + . ID=JANDXE010000032.1:1..33667;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000032.1 Genbank gene 311 520 . + . ID=gene-NND05_12900;Name=NND05_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12900 JANDXE010000032.1 Protein Homology CDS 311 520 . + 0 ID=cds-MCP9538425.1;Parent=gene-NND05_12900;Dbxref=NCBI_GP:MCP9538425.1;Name=MCP9538425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846942.1;locus_tag=NND05_12900;product=DUF4248 domain-containing protein;protein_id=MCP9538425.1;transl_table=11 JANDXE010000032.1 Genbank gene 706 1293 . + . ID=gene-NND05_12905;Name=NND05_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12905 JANDXE010000032.1 Protein Homology CDS 706 1293 . + 0 ID=cds-MCP9538426.1;Parent=gene-NND05_12905;Dbxref=NCBI_GP:MCP9538426.1;Name=MCP9538426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846957.1;locus_tag=NND05_12905;product=DNA-binding protein;protein_id=MCP9538426.1;transl_table=11 JANDXE010000032.1 Genbank gene 1507 1602 . + . ID=gene-NND05_12910;Name=NND05_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12910 JANDXE010000032.1 Protein Homology CDS 1507 1602 . + 0 ID=cds-MCP9538427.1;Parent=gene-NND05_12910;Dbxref=NCBI_GP:MCP9538427.1;Name=MCP9538427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007575436.1;locus_tag=NND05_12910;product=smalltalk protein;protein_id=MCP9538427.1;transl_table=11 JANDXE010000032.1 Genbank gene 1699 2133 . + . ID=gene-NND05_12915;Name=NND05_12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12915 JANDXE010000032.1 Protein Homology CDS 1699 2133 . + 0 ID=cds-MCP9538428.1;Parent=gene-NND05_12915;Dbxref=NCBI_GP:MCP9538428.1;Name=MCP9538428.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846958.1;locus_tag=NND05_12915;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9538428.1;transl_table=11 JANDXE010000032.1 Genbank gene 2284 2619 . - . ID=gene-NND05_12920;Name=NND05_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12920 JANDXE010000032.1 Protein Homology CDS 2284 2619 . - 0 ID=cds-MCP9538429.1;Parent=gene-NND05_12920;Dbxref=NCBI_GP:MCP9538429.1;Name=MCP9538429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005836958.1;locus_tag=NND05_12920;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9538429.1;transl_table=11 JANDXE010000032.1 Genbank gene 2610 2879 . - . ID=gene-NND05_12925;Name=NND05_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12925 JANDXE010000032.1 GeneMarkS-2+ CDS 2610 2879 . - 0 ID=cds-MCP9538430.1;Parent=gene-NND05_12925;Dbxref=NCBI_GP:MCP9538430.1;Name=MCP9538430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12925;product=hypothetical protein;protein_id=MCP9538430.1;transl_table=11 JANDXE010000032.1 Genbank gene 3243 4178 . - . ID=gene-NND05_12930;Name=NND05_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12930 JANDXE010000032.1 Protein Homology CDS 3243 4178 . - 0 ID=cds-MCP9538431.1;Parent=gene-NND05_12930;Dbxref=NCBI_GP:MCP9538431.1;Name=MCP9538431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574869.1;locus_tag=NND05_12930;product=hypothetical protein;protein_id=MCP9538431.1;transl_table=11 JANDXE010000032.1 Genbank gene 4554 5066 . - . ID=gene-NND05_12935;Name=NND05_12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12935 JANDXE010000032.1 Protein Homology CDS 4554 5066 . - 0 ID=cds-MCP9538432.1;Parent=gene-NND05_12935;Dbxref=NCBI_GP:MCP9538432.1;Name=MCP9538432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849445.1;locus_tag=NND05_12935;product=DUF6169 family protein;protein_id=MCP9538432.1;transl_table=11 JANDXE010000032.1 Genbank gene 5066 5233 . - . ID=gene-NND05_12940;Name=NND05_12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12940 JANDXE010000032.1 Protein Homology CDS 5066 5233 . - 0 ID=cds-MCP9538433.1;Parent=gene-NND05_12940;Dbxref=NCBI_GP:MCP9538433.1;Name=MCP9538433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007219605.1;locus_tag=NND05_12940;product=hypothetical protein;protein_id=MCP9538433.1;transl_table=11 JANDXE010000032.1 Genbank gene 5278 5418 . - . ID=gene-NND05_12945;Name=NND05_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12945 JANDXE010000032.1 GeneMarkS-2+ CDS 5278 5418 . - 0 ID=cds-MCP9538434.1;Parent=gene-NND05_12945;Dbxref=NCBI_GP:MCP9538434.1;Name=MCP9538434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12945;product=hypothetical protein;protein_id=MCP9538434.1;transl_table=11 JANDXE010000032.1 Genbank gene 5601 5855 . + . ID=gene-NND05_12950;Name=NND05_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12950 JANDXE010000032.1 Protein Homology CDS 5601 5855 . + 0 ID=cds-MCP9538435.1;Parent=gene-NND05_12950;Dbxref=NCBI_GP:MCP9538435.1;Name=MCP9538435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800926.1;locus_tag=NND05_12950;product=hypothetical protein;protein_id=MCP9538435.1;transl_table=11 JANDXE010000032.1 Genbank gene 5852 6046 . + . ID=gene-NND05_12955;Name=NND05_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12955 JANDXE010000032.1 GeneMarkS-2+ CDS 5852 6046 . + 0 ID=cds-MCP9538436.1;Parent=gene-NND05_12955;Dbxref=NCBI_GP:MCP9538436.1;Name=MCP9538436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12955;product=hypothetical protein;protein_id=MCP9538436.1;transl_table=11 JANDXE010000032.1 Genbank pseudogene 6127 6978 . - . ID=gene-NND05_12960;Name=NND05_12960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_12960;pseudo=true JANDXE010000032.1 Protein Homology CDS 6127 6978 . - 0 ID=cds-NND05_12960;Parent=gene-NND05_12960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005836416.1;locus_tag=NND05_12960;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;transl_table=11 JANDXE010000032.1 Genbank gene 7044 7301 . + . ID=gene-NND05_12965;Name=NND05_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12965 JANDXE010000032.1 GeneMarkS-2+ CDS 7044 7301 . + 0 ID=cds-MCP9538437.1;Parent=gene-NND05_12965;Dbxref=NCBI_GP:MCP9538437.1;Name=MCP9538437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12965;product=hypothetical protein;protein_id=MCP9538437.1;transl_table=11 JANDXE010000032.1 Genbank gene 7324 7590 . + . ID=gene-NND05_12970;Name=NND05_12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12970 JANDXE010000032.1 Protein Homology CDS 7324 7590 . + 0 ID=cds-MCP9538438.1;Parent=gene-NND05_12970;Dbxref=NCBI_GP:MCP9538438.1;Name=MCP9538438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264739.1;locus_tag=NND05_12970;product=helix-turn-helix domain-containing protein;protein_id=MCP9538438.1;transl_table=11 JANDXE010000032.1 Genbank gene 7655 9499 . - . ID=gene-NND05_12975;Name=NND05_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12975 JANDXE010000032.1 Protein Homology CDS 7655 9499 . - 0 ID=cds-MCP9538439.1;Parent=gene-NND05_12975;Dbxref=NCBI_GP:MCP9538439.1;Name=MCP9538439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368386.1;locus_tag=NND05_12975;product=DUF262 domain-containing protein;protein_id=MCP9538439.1;transl_table=11 JANDXE010000032.1 Genbank gene 9589 10419 . - . ID=gene-NND05_12980;Name=NND05_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12980 JANDXE010000032.1 Protein Homology CDS 9589 10419 . - 0 ID=cds-MCP9538440.1;Parent=gene-NND05_12980;Dbxref=NCBI_GP:MCP9538440.1;Name=MCP9538440.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=NND05_12980;product=HNH endonuclease;protein_id=MCP9538440.1;transl_table=11 JANDXE010000032.1 Genbank gene 10422 11642 . - . ID=gene-NND05_12985;Name=NND05_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12985 JANDXE010000032.1 Protein Homology CDS 10422 11642 . - 0 ID=cds-MCP9538441.1;Parent=gene-NND05_12985;Dbxref=NCBI_GP:MCP9538441.1;Name=MCP9538441.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=NND05_12985;product=ATP-binding protein;protein_id=MCP9538441.1;transl_table=11 JANDXE010000032.1 Genbank gene 11647 12141 . - . ID=gene-NND05_12990;Name=NND05_12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12990 JANDXE010000032.1 GeneMarkS-2+ CDS 11647 12141 . - 0 ID=cds-MCP9538442.1;Parent=gene-NND05_12990;Dbxref=NCBI_GP:MCP9538442.1;Name=MCP9538442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_12990;product=hypothetical protein;protein_id=MCP9538442.1;transl_table=11 JANDXE010000032.1 Genbank gene 12271 12861 . - . ID=gene-NND05_12995;Name=NND05_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_12995 JANDXE010000032.1 Protein Homology CDS 12271 12861 . - 0 ID=cds-MCP9538443.1;Parent=gene-NND05_12995;Dbxref=NCBI_GP:MCP9538443.1;Name=MCP9538443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848195.1;locus_tag=NND05_12995;product=GNAT family N-acetyltransferase;protein_id=MCP9538443.1;transl_table=11 JANDXE010000032.1 Genbank gene 12871 13026 . - . ID=gene-NND05_13000;Name=NND05_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13000 JANDXE010000032.1 Protein Homology CDS 12871 13026 . - 0 ID=cds-MCP9538444.1;Parent=gene-NND05_13000;Dbxref=NCBI_GP:MCP9538444.1;Name=MCP9538444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849435.1;locus_tag=NND05_13000;product=hypothetical protein;protein_id=MCP9538444.1;transl_table=11 JANDXE010000032.1 Genbank gene 13500 13823 . + . ID=gene-NND05_13005;Name=NND05_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13005 JANDXE010000032.1 Protein Homology CDS 13500 13823 . + 0 ID=cds-MCP9538445.1;Parent=gene-NND05_13005;Dbxref=NCBI_GP:MCP9538445.1;Name=MCP9538445.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02384.1;locus_tag=NND05_13005;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MCP9538445.1;transl_table=11 JANDXE010000032.1 Genbank gene 14477 14704 . - . ID=gene-NND05_13010;Name=NND05_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13010 JANDXE010000032.1 GeneMarkS-2+ CDS 14477 14704 . - 0 ID=cds-MCP9538446.1;Parent=gene-NND05_13010;Dbxref=NCBI_GP:MCP9538446.1;Name=MCP9538446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13010;product=hypothetical protein;protein_id=MCP9538446.1;transl_table=11 JANDXE010000032.1 Genbank gene 15018 15608 . - . ID=gene-NND05_13015;Name=NND05_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13015 JANDXE010000032.1 Protein Homology CDS 15018 15608 . - 0 ID=cds-MCP9538447.1;Parent=gene-NND05_13015;Dbxref=NCBI_GP:MCP9538447.1;Name=MCP9538447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865723.1;locus_tag=NND05_13015;product=sugar transferase;protein_id=MCP9538447.1;transl_table=11 JANDXE010000032.1 Genbank gene 15615 16904 . - . ID=gene-NND05_13020;Name=NND05_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13020 JANDXE010000032.1 Protein Homology CDS 15615 16904 . - 0 ID=cds-MCP9538448.1;Parent=gene-NND05_13020;Dbxref=NCBI_GP:MCP9538448.1;Name=MCP9538448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016267362.1;locus_tag=NND05_13020;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=MCP9538448.1;transl_table=11 JANDXE010000032.1 Genbank gene 16948 17766 . - . ID=gene-NND05_13025;Name=NND05_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13025 JANDXE010000032.1 Protein Homology CDS 16948 17766 . - 0 ID=cds-MCP9538449.1;Parent=gene-NND05_13025;Dbxref=NCBI_GP:MCP9538449.1;Name=MCP9538449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016267858.1;locus_tag=NND05_13025;product=glycosyltransferase;protein_id=MCP9538449.1;transl_table=11 JANDXE010000032.1 Genbank gene 18655 19536 . - . ID=gene-NND05_13030;Name=NND05_13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13030 JANDXE010000032.1 Protein Homology CDS 18655 19536 . - 0 ID=cds-MCP9538450.1;Parent=gene-NND05_13030;Dbxref=NCBI_GP:MCP9538450.1;Name=MCP9538450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016852.2;locus_tag=NND05_13030;product=LicD family protein;protein_id=MCP9538450.1;transl_table=11 JANDXE010000032.1 Genbank gene 19542 19961 . - . ID=gene-NND05_13035;Name=NND05_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13035 JANDXE010000032.1 Protein Homology CDS 19542 19961 . - 0 ID=cds-MCP9538451.1;Parent=gene-NND05_13035;Dbxref=NCBI_GP:MCP9538451.1;Name=MCP9538451.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018361885.1;locus_tag=NND05_13035;product=adenylyltransferase/cytidyltransferase family protein;protein_id=MCP9538451.1;transl_table=11 JANDXE010000032.1 Genbank gene 19963 20886 . - . ID=gene-NND05_13040;Name=NND05_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13040 JANDXE010000032.1 GeneMarkS-2+ CDS 19963 20886 . - 0 ID=cds-MCP9538452.1;Parent=gene-NND05_13040;Dbxref=NCBI_GP:MCP9538452.1;Name=MCP9538452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13040;product=hypothetical protein;protein_id=MCP9538452.1;transl_table=11 JANDXE010000032.1 Genbank gene 20877 21752 . - . ID=gene-NND05_13045;Name=NND05_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13045 JANDXE010000032.1 Protein Homology CDS 20877 21752 . - 0 ID=cds-MCP9538453.1;Parent=gene-NND05_13045;Dbxref=NCBI_GP:MCP9538453.1;Name=MCP9538453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=NND05_13045;product=glycosyltransferase family 4 protein;protein_id=MCP9538453.1;transl_table=11 JANDXE010000032.1 Genbank gene 21826 21984 . - . ID=gene-NND05_13050;Name=NND05_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13050 JANDXE010000032.1 GeneMarkS-2+ CDS 21826 21984 . - 0 ID=cds-MCP9538454.1;Parent=gene-NND05_13050;Dbxref=NCBI_GP:MCP9538454.1;Name=MCP9538454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13050;product=hypothetical protein;protein_id=MCP9538454.1;transl_table=11 JANDXE010000032.1 Genbank gene 21993 22703 . - . ID=gene-NND05_13055;Name=NND05_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13055 JANDXE010000032.1 Protein Homology CDS 21993 22703 . - 0 ID=cds-MCP9538455.1;Parent=gene-NND05_13055;Dbxref=NCBI_GP:MCP9538455.1;Name=MCP9538455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005832332.1;locus_tag=NND05_13055;product=glycosyltransferase family 2 protein;protein_id=MCP9538455.1;transl_table=11 JANDXE010000032.1 Genbank gene 22700 23545 . - . ID=gene-NND05_13060;Name=NND05_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13060 JANDXE010000032.1 Protein Homology CDS 22700 23545 . - 0 ID=cds-MCP9538456.1;Parent=gene-NND05_13060;Dbxref=NCBI_GP:MCP9538456.1;Name=MCP9538456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NND05_13060;product=glycosyltransferase;protein_id=MCP9538456.1;transl_table=11 JANDXE010000032.1 Genbank gene 23545 24354 . - . ID=gene-NND05_13065;Name=NND05_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13065 JANDXE010000032.1 Protein Homology CDS 23545 24354 . - 0 ID=cds-MCP9538457.1;Parent=gene-NND05_13065;Dbxref=NCBI_GP:MCP9538457.1;Name=MCP9538457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021616.2;locus_tag=NND05_13065;product=glycosyltransferase family 2 protein;protein_id=MCP9538457.1;transl_table=11 JANDXE010000032.1 Genbank gene 24364 25500 . - . ID=gene-NND05_13070;Name=NND05_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13070 JANDXE010000032.1 Protein Homology CDS 24364 25500 . - 0 ID=cds-MCP9538458.1;Parent=gene-NND05_13070;Dbxref=NCBI_GP:MCP9538458.1;Name=MCP9538458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.2;locus_tag=NND05_13070;product=EpsG family protein;protein_id=MCP9538458.1;transl_table=11 JANDXE010000032.1 Genbank gene 25508 26935 . - . ID=gene-NND05_13075;Name=NND05_13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13075 JANDXE010000032.1 Protein Homology CDS 25508 26935 . - 0 ID=cds-MCP9538459.1;Parent=gene-NND05_13075;Dbxref=NCBI_GP:MCP9538459.1;Name=MCP9538459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=NND05_13075;product=flippase;protein_id=MCP9538459.1;transl_table=11 JANDXE010000032.1 Genbank gene 26946 28364 . - . ID=gene-NND05_13080;Name=NND05_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13080 JANDXE010000032.1 GeneMarkS-2+ CDS 26946 28364 . - 0 ID=cds-MCP9538460.1;Parent=gene-NND05_13080;Dbxref=NCBI_GP:MCP9538460.1;Name=MCP9538460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13080;product=glycoside hydrolase family 55 protein;protein_id=MCP9538460.1;transl_table=11 JANDXE010000032.1 Genbank gene 28443 29576 . - . ID=gene-NND05_13085;Name=NND05_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13085 JANDXE010000032.1 Protein Homology CDS 28443 29576 . - 0 ID=cds-MCP9538461.1;Parent=gene-NND05_13085;Dbxref=NCBI_GP:MCP9538461.1;Name=MCP9538461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847283.1;locus_tag=NND05_13085;product=dTDP-glucose 4%2C6-dehydratase;protein_id=MCP9538461.1;transl_table=11 JANDXE010000032.1 Genbank gene 29582 30490 . - . ID=gene-NND05_13090;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NND05_13090 JANDXE010000032.1 Protein Homology CDS 29582 30490 . - 0 ID=cds-MCP9538462.1;Parent=gene-NND05_13090;Dbxref=NCBI_GP:MCP9538462.1;Name=MCP9538462.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006045009.1;locus_tag=NND05_13090;product=dTDP-4-dehydrorhamnose reductase;protein_id=MCP9538462.1;transl_table=11 JANDXE010000032.1 Genbank gene 30594 31502 . - . ID=gene-NND05_13095;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NND05_13095 JANDXE010000032.1 Protein Homology CDS 30594 31502 . - 0 ID=cds-MCP9538463.1;Parent=gene-NND05_13095;Dbxref=NCBI_GP:MCP9538463.1;Name=MCP9538463.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796173.1;locus_tag=NND05_13095;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=MCP9538463.1;transl_table=11 JANDXE010000032.1 Genbank gene 31534 32121 . - . ID=gene-NND05_13100;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NND05_13100 JANDXE010000032.1 Protein Homology CDS 31534 32121 . - 0 ID=cds-MCP9538464.1;Parent=gene-NND05_13100;Dbxref=NCBI_GP:MCP9538464.1;Name=MCP9538464.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464299.1;locus_tag=NND05_13100;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=MCP9538464.1;transl_table=11 JANDXE010000032.1 Genbank gene 32742 33053 . - . ID=gene-NND05_13105;Name=NND05_13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13105 JANDXE010000032.1 Protein Homology CDS 32742 33053 . - 0 ID=cds-MCP9538465.1;Parent=gene-NND05_13105;Dbxref=NCBI_GP:MCP9538465.1;Name=MCP9538465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005938215.1;locus_tag=NND05_13105;product=helix-turn-helix domain-containing protein;protein_id=MCP9538465.1;transl_table=11 JANDXE010000032.1 Genbank gene 33101 33394 . - . ID=gene-NND05_13110;Name=NND05_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13110 JANDXE010000032.1 Protein Homology CDS 33101 33394 . - 0 ID=cds-MCP9538466.1;Parent=gene-NND05_13110;Dbxref=NCBI_GP:MCP9538466.1;Name=MCP9538466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007214767.1;locus_tag=NND05_13110;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9538466.1;transl_table=11 ##sequence-region JANDXE010000033.1 1 33260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000033.1 Genbank region 1 33260 . + . ID=JANDXE010000033.1:1..33260;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000033.1 Genbank gene 200 2395 . - . ID=gene-NND05_13115;Name=NND05_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13115 JANDXE010000033.1 Protein Homology CDS 200 2395 . - 0 ID=cds-MCP9538467.1;Parent=gene-NND05_13115;Dbxref=NCBI_GP:MCP9538467.1;Name=MCP9538467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345073.1;locus_tag=NND05_13115;product=alpha-galactosidase;protein_id=MCP9538467.1;transl_table=11 JANDXE010000033.1 Genbank gene 2699 3355 . + . ID=gene-NND05_13120;Name=NND05_13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13120 JANDXE010000033.1 Protein Homology CDS 2699 3355 . + 0 ID=cds-MCP9538468.1;Parent=gene-NND05_13120;Dbxref=NCBI_GP:MCP9538468.1;Name=MCP9538468.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341971.1;locus_tag=NND05_13120;product=hemolysin III family protein;protein_id=MCP9538468.1;transl_table=11 JANDXE010000033.1 Genbank gene 3604 4428 . + . ID=gene-NND05_13125;Name=NND05_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13125 JANDXE010000033.1 Protein Homology CDS 3604 4428 . + 0 ID=cds-MCP9538469.1;Parent=gene-NND05_13125;Dbxref=NCBI_GP:MCP9538469.1;Name=MCP9538469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848203.1;locus_tag=NND05_13125;product=ABC transporter ATP-binding protein;protein_id=MCP9538469.1;transl_table=11 JANDXE010000033.1 Genbank gene 4435 5289 . + . ID=gene-NND05_13130;Name=NND05_13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13130 JANDXE010000033.1 GeneMarkS-2+ CDS 4435 5289 . + 0 ID=cds-MCP9538470.1;Parent=gene-NND05_13130;Dbxref=NCBI_GP:MCP9538470.1;Name=MCP9538470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13130;product=hypothetical protein;protein_id=MCP9538470.1;transl_table=11 JANDXE010000033.1 Genbank gene 5309 5680 . + . ID=gene-NND05_13135;Name=NND05_13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13135 JANDXE010000033.1 Protein Homology CDS 5309 5680 . + 0 ID=cds-MCP9538471.1;Parent=gene-NND05_13135;Dbxref=NCBI_GP:MCP9538471.1;Name=MCP9538471.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848205.1;locus_tag=NND05_13135;product=GntR family transcriptional regulator;protein_id=MCP9538471.1;transl_table=11 JANDXE010000033.1 Genbank gene 5843 6559 . + . ID=gene-NND05_13140;Name=NND05_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13140 JANDXE010000033.1 Protein Homology CDS 5843 6559 . + 0 ID=cds-MCP9538472.1;Parent=gene-NND05_13140;Dbxref=NCBI_GP:MCP9538472.1;Name=MCP9538472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281285.1;locus_tag=NND05_13140;product=ABC transporter ATP-binding protein;protein_id=MCP9538472.1;transl_table=11 JANDXE010000033.1 Genbank gene 6575 7834 . + . ID=gene-NND05_13145;Name=NND05_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13145 JANDXE010000033.1 Protein Homology CDS 6575 7834 . + 0 ID=cds-MCP9538473.1;Parent=gene-NND05_13145;Dbxref=NCBI_GP:MCP9538473.1;Name=MCP9538473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410797.1;locus_tag=NND05_13145;product=ABC transporter permease;protein_id=MCP9538473.1;transl_table=11 JANDXE010000033.1 Genbank gene 7899 9146 . + . ID=gene-NND05_13150;Name=NND05_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13150 JANDXE010000033.1 Protein Homology CDS 7899 9146 . + 0 ID=cds-MCP9538474.1;Parent=gene-NND05_13150;Dbxref=NCBI_GP:MCP9538474.1;Name=MCP9538474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565504.1;locus_tag=NND05_13150;product=ABC transporter permease;protein_id=MCP9538474.1;transl_table=11 JANDXE010000033.1 Genbank gene 9257 10378 . + . ID=gene-NND05_13155;Name=NND05_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13155 JANDXE010000033.1 Protein Homology CDS 9257 10378 . + 0 ID=cds-MCP9538475.1;Parent=gene-NND05_13155;Dbxref=NCBI_GP:MCP9538475.1;Name=MCP9538475.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848209.1;locus_tag=NND05_13155;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9538475.1;transl_table=11 JANDXE010000033.1 Genbank gene 10449 11222 . - . ID=gene-NND05_13160;Name=NND05_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13160 JANDXE010000033.1 Protein Homology CDS 10449 11222 . - 0 ID=cds-MCP9538476.1;Parent=gene-NND05_13160;Dbxref=NCBI_GP:MCP9538476.1;Name=MCP9538476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020123.2;locus_tag=NND05_13160;product=TlpA family protein disulfide reductase;protein_id=MCP9538476.1;transl_table=11 JANDXE010000033.1 Genbank gene 11865 13001 . - . ID=gene-NND05_13165;Name=NND05_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13165 JANDXE010000033.1 Protein Homology CDS 11865 13001 . - 0 ID=cds-MCP9538477.1;Parent=gene-NND05_13165;Dbxref=NCBI_GP:MCP9538477.1;Name=MCP9538477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848892.1;locus_tag=NND05_13165;product=ATP-binding protein;protein_id=MCP9538477.1;transl_table=11 JANDXE010000033.1 Genbank gene 13164 15449 . - . ID=gene-NND05_13170;Name=NND05_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13170 JANDXE010000033.1 Protein Homology CDS 13164 15449 . - 0 ID=cds-MCP9538478.1;Parent=gene-NND05_13170;Dbxref=NCBI_GP:MCP9538478.1;Name=MCP9538478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025092.2;locus_tag=NND05_13170;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9538478.1;transl_table=11 JANDXE010000033.1 Genbank gene 15642 17396 . - . ID=gene-NND05_13175;Name=NND05_13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13175 JANDXE010000033.1 GeneMarkS-2+ CDS 15642 17396 . - 0 ID=cds-MCP9538479.1;Parent=gene-NND05_13175;Dbxref=NCBI_GP:MCP9538479.1;Name=MCP9538479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13175;product=hypothetical protein;protein_id=MCP9538479.1;transl_table=11 JANDXE010000033.1 Genbank gene 18255 20537 . - . ID=gene-NND05_13180;Name=NND05_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13180 JANDXE010000033.1 Protein Homology CDS 18255 20537 . - 0 ID=cds-MCP9538480.1;Parent=gene-NND05_13180;Dbxref=NCBI_GP:MCP9538480.1;Name=MCP9538480.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_13180;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9538480.1;transl_table=11 JANDXE010000033.1 Genbank gene 20730 22388 . - . ID=gene-NND05_13185;Name=NND05_13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13185 JANDXE010000033.1 GeneMarkS-2+ CDS 20730 22388 . - 0 ID=cds-MCP9538481.1;Parent=gene-NND05_13185;Dbxref=NCBI_GP:MCP9538481.1;Name=MCP9538481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13185;product=hypothetical protein;protein_id=MCP9538481.1;transl_table=11 JANDXE010000033.1 Genbank gene 22696 25359 . - . ID=gene-NND05_13190;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=NND05_13190 JANDXE010000033.1 Protein Homology CDS 22696 25359 . - 0 ID=cds-MCP9538482.1;Parent=gene-NND05_13190;Dbxref=NCBI_GP:MCP9538482.1;Name=MCP9538482.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367684.1;locus_tag=NND05_13190;product=DNA mismatch repair protein MutS;protein_id=MCP9538482.1;transl_table=11 JANDXE010000033.1 Genbank gene 25552 28665 . - . ID=gene-NND05_13195;Name=NND05_13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13195 JANDXE010000033.1 Protein Homology CDS 25552 28665 . - 0 ID=cds-MCP9538483.1;Parent=gene-NND05_13195;Dbxref=NCBI_GP:MCP9538483.1;Name=MCP9538483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640749.1;locus_tag=NND05_13195;product=DUF4981 domain-containing protein;protein_id=MCP9538483.1;transl_table=11 JANDXE010000033.1 Genbank gene 28720 31065 . - . ID=gene-NND05_13200;Name=NND05_13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13200 JANDXE010000033.1 Protein Homology CDS 28720 31065 . - 0 ID=cds-MCP9538484.1;Parent=gene-NND05_13200;Dbxref=NCBI_GP:MCP9538484.1;Name=MCP9538484.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225256.1;locus_tag=NND05_13200;product=family 20 glycosylhydrolase;protein_id=MCP9538484.1;transl_table=11 JANDXE010000033.1 Genbank gene 31550 32758 . + . ID=gene-NND05_13205;Name=NND05_13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13205 JANDXE010000033.1 Protein Homology CDS 31550 32758 . + 0 ID=cds-MCP9538485.1;Parent=gene-NND05_13205;Dbxref=NCBI_GP:MCP9538485.1;Name=MCP9538485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007175392.1;locus_tag=NND05_13205;product=ROK family protein;protein_id=MCP9538485.1;transl_table=11 ##sequence-region JANDXE010000034.1 1 33135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000034.1 Genbank region 1 33135 . + . ID=JANDXE010000034.1:1..33135;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000034.1 Genbank gene 523 1323 . - . ID=gene-NND05_13210;Name=NND05_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13210 JANDXE010000034.1 Protein Homology CDS 523 1323 . - 0 ID=cds-MCP9538486.1;Parent=gene-NND05_13210;Dbxref=NCBI_GP:MCP9538486.1;Name=MCP9538486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848033.1;locus_tag=NND05_13210;product=ABC transporter ATP-binding protein;protein_id=MCP9538486.1;transl_table=11 JANDXE010000034.1 Genbank gene 1377 1751 . - . ID=gene-NND05_13215;Name=NND05_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13215 JANDXE010000034.1 Protein Homology CDS 1377 1751 . - 0 ID=cds-MCP9538487.1;Parent=gene-NND05_13215;Dbxref=NCBI_GP:MCP9538487.1;Name=MCP9538487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283417.1;locus_tag=NND05_13215;product=RidA family protein;protein_id=MCP9538487.1;transl_table=11 JANDXE010000034.1 Genbank gene 1792 2991 . - . ID=gene-NND05_13220;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=NND05_13220 JANDXE010000034.1 Protein Homology CDS 1792 2991 . - 0 ID=cds-MCP9538488.1;Parent=gene-NND05_13220;Dbxref=NCBI_GP:MCP9538488.1;Name=MCP9538488.1;Ontology_term=GO:0006549,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine metabolic process|0006549||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848031.1;locus_tag=NND05_13220;product=threonine ammonia-lyase;protein_id=MCP9538488.1;transl_table=11 JANDXE010000034.1 Genbank gene 3163 3969 . - . ID=gene-NND05_13225;Name=NND05_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13225 JANDXE010000034.1 Protein Homology CDS 3163 3969 . - 0 ID=cds-MCP9538489.1;Parent=gene-NND05_13225;Dbxref=NCBI_GP:MCP9538489.1;Name=MCP9538489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005852435.1;locus_tag=NND05_13225;product=Cof-type HAD-IIB family hydrolase;protein_id=MCP9538489.1;transl_table=11 JANDXE010000034.1 Genbank gene 4207 6282 . + . ID=gene-NND05_13230;Name=NND05_13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13230 JANDXE010000034.1 Protein Homology CDS 4207 6282 . + 0 ID=cds-MCP9538490.1;Parent=gene-NND05_13230;Dbxref=NCBI_GP:MCP9538490.1;Name=MCP9538490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411386.1;locus_tag=NND05_13230;product=glycoside hydrolase family 127 protein;protein_id=MCP9538490.1;transl_table=11 JANDXE010000034.1 Genbank gene 6421 6921 . + . ID=gene-NND05_13235;Name=NND05_13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13235 JANDXE010000034.1 Protein Homology CDS 6421 6921 . + 0 ID=cds-MCP9538491.1;Parent=gene-NND05_13235;Dbxref=NCBI_GP:MCP9538491.1;Name=MCP9538491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=NND05_13235;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9538491.1;transl_table=11 JANDXE010000034.1 Genbank gene 6967 7740 . + . ID=gene-NND05_13240;Name=NND05_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13240 JANDXE010000034.1 GeneMarkS-2+ CDS 6967 7740 . + 0 ID=cds-MCP9538492.1;Parent=gene-NND05_13240;Dbxref=NCBI_GP:MCP9538492.1;Name=MCP9538492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13240;product=hypothetical protein;protein_id=MCP9538492.1;transl_table=11 JANDXE010000034.1 Genbank gene 7768 8676 . + . ID=gene-NND05_13245;Name=NND05_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13245 JANDXE010000034.1 GeneMarkS-2+ CDS 7768 8676 . + 0 ID=cds-MCP9538493.1;Parent=gene-NND05_13245;Dbxref=NCBI_GP:MCP9538493.1;Name=MCP9538493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13245;product=hypothetical protein;protein_id=MCP9538493.1;transl_table=11 JANDXE010000034.1 Genbank gene 8823 10373 . - . ID=gene-NND05_13250;Name=NND05_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13250 JANDXE010000034.1 Protein Homology CDS 8823 10373 . - 0 ID=cds-MCP9538494.1;Parent=gene-NND05_13250;Dbxref=NCBI_GP:MCP9538494.1;Name=MCP9538494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005840724.1;locus_tag=NND05_13250;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9538494.1;transl_table=11 JANDXE010000034.1 Genbank gene 10387 13443 . - . ID=gene-NND05_13255;Name=NND05_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13255 JANDXE010000034.1 Protein Homology CDS 10387 13443 . - 0 ID=cds-MCP9538495.1;Parent=gene-NND05_13255;Dbxref=NCBI_GP:MCP9538495.1;Name=MCP9538495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008655935.1;locus_tag=NND05_13255;product=TonB-dependent receptor;protein_id=MCP9538495.1;transl_table=11 JANDXE010000034.1 Genbank pseudogene 14223 14384 . + . ID=gene-NND05_13260;Name=NND05_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13260;pseudo=true JANDXE010000034.1 Protein Homology CDS 14223 14384 . + 0 ID=cds-NND05_13260;Parent=gene-NND05_13260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174819.1;locus_tag=NND05_13260;product=glycoside hydrolase family 88 protein;pseudo=true;transl_table=11 JANDXE010000034.1 Genbank gene 14390 17626 . + . ID=gene-NND05_13265;Name=NND05_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13265 JANDXE010000034.1 Protein Homology CDS 14390 17626 . + 0 ID=cds-MCP9538496.1;Parent=gene-NND05_13265;Dbxref=NCBI_GP:MCP9538496.1;Name=MCP9538496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848019.1;locus_tag=NND05_13265;product=DUF4981 domain-containing protein;protein_id=MCP9538496.1;transl_table=11 JANDXE010000034.1 Genbank gene 17789 19729 . + . ID=gene-NND05_13270;Name=NND05_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13270 JANDXE010000034.1 Protein Homology CDS 17789 19729 . + 0 ID=cds-MCP9538497.1;Parent=gene-NND05_13270;Dbxref=NCBI_GP:MCP9538497.1;Name=MCP9538497.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375378.1;locus_tag=NND05_13270;product=carbohydrate binding domain-containing protein;protein_id=MCP9538497.1;transl_table=11 JANDXE010000034.1 Genbank gene 19845 21218 . - . ID=gene-NND05_13275;Name=NND05_13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13275 JANDXE010000034.1 Protein Homology CDS 19845 21218 . - 0 ID=cds-MCP9538498.1;Parent=gene-NND05_13275;Dbxref=NCBI_GP:MCP9538498.1;Name=MCP9538498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846944.1;locus_tag=NND05_13275;product=AAA family ATPase;protein_id=MCP9538498.1;transl_table=11 JANDXE010000034.1 Genbank gene 21829 24240 . + . ID=gene-NND05_13280;Name=NND05_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13280 JANDXE010000034.1 GeneMarkS-2+ CDS 21829 24240 . + 0 ID=cds-MCP9538499.1;Parent=gene-NND05_13280;Dbxref=NCBI_GP:MCP9538499.1;Name=MCP9538499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13280;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9538499.1;transl_table=11 JANDXE010000034.1 Genbank gene 24593 26626 . + . ID=gene-NND05_13285;Name=NND05_13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13285 JANDXE010000034.1 Protein Homology CDS 24593 26626 . + 0 ID=cds-MCP9538500.1;Parent=gene-NND05_13285;Dbxref=NCBI_GP:MCP9538500.1;Name=MCP9538500.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF037660.2;locus_tag=NND05_13285;product=histidine kinase;protein_id=MCP9538500.1;transl_table=11 JANDXE010000034.1 Genbank gene 26669 27436 . + . ID=gene-NND05_13290;Name=NND05_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13290 JANDXE010000034.1 Protein Homology CDS 26669 27436 . + 0 ID=cds-MCP9538501.1;Parent=gene-NND05_13290;Dbxref=NCBI_GP:MCP9538501.1;Name=MCP9538501.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_13290;product=response regulator;protein_id=MCP9538501.1;transl_table=11 JANDXE010000034.1 Genbank gene 27450 28682 . + . ID=gene-NND05_13295;Name=NND05_13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13295 JANDXE010000034.1 GeneMarkS-2+ CDS 27450 28682 . + 0 ID=cds-MCP9538502.1;Parent=gene-NND05_13295;Dbxref=NCBI_GP:MCP9538502.1;Name=MCP9538502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13295;product=hypothetical protein;protein_id=MCP9538502.1;transl_table=11 JANDXE010000034.1 Genbank gene 28725 29528 . + . ID=gene-NND05_13300;Name=NND05_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13300 JANDXE010000034.1 Protein Homology CDS 28725 29528 . + 0 ID=cds-MCP9538503.1;Parent=gene-NND05_13300;Dbxref=NCBI_GP:MCP9538503.1;Name=MCP9538503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065341.1;locus_tag=NND05_13300;product=hypothetical protein;protein_id=MCP9538503.1;transl_table=11 JANDXE010000034.1 Genbank gene 29639 31828 . + . ID=gene-NND05_13305;Name=NND05_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13305 JANDXE010000034.1 Protein Homology CDS 29639 31828 . + 0 ID=cds-MCP9538504.1;Parent=gene-NND05_13305;Dbxref=NCBI_GP:MCP9538504.1;Name=MCP9538504.1;Ontology_term=GO:0004356;gbkey=CDS;go_function=glutamate-ammonia ligase activity|0004356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341525.1;locus_tag=NND05_13305;product=glutamine synthetase III;protein_id=MCP9538504.1;transl_table=11 JANDXE010000034.1 Genbank gene 32254 32838 . - . ID=gene-NND05_13310;Name=NND05_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13310 JANDXE010000034.1 Protein Homology CDS 32254 32838 . - 0 ID=cds-MCP9538505.1;Parent=gene-NND05_13310;Dbxref=NCBI_GP:MCP9538505.1;Name=MCP9538505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847339.1;locus_tag=NND05_13310;product=DNA-binding protein;protein_id=MCP9538505.1;transl_table=11 ##sequence-region JANDXE010000035.1 1 32870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000035.1 Genbank region 1 32870 . + . ID=JANDXE010000035.1:1..32870;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000035.1 Genbank gene 308 1480 . + . ID=gene-NND05_13315;Name=NND05_13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13315 JANDXE010000035.1 Protein Homology CDS 308 1480 . + 0 ID=cds-MCP9538506.1;Parent=gene-NND05_13315;Dbxref=NCBI_GP:MCP9538506.1;Name=MCP9538506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NND05_13315;product=MFS transporter;protein_id=MCP9538506.1;transl_table=11 JANDXE010000035.1 Genbank gene 1869 4400 . - . ID=gene-NND05_13320;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=NND05_13320 JANDXE010000035.1 Protein Homology CDS 1869 4400 . - 0 ID=cds-MCP9538507.1;Parent=gene-NND05_13320;Dbxref=NCBI_GP:MCP9538507.1;Name=MCP9538507.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920196.1;locus_tag=NND05_13320;product=ferrous iron transport protein B;protein_id=MCP9538507.1;transl_table=11 JANDXE010000035.1 Genbank gene 4633 7974 . - . ID=gene-NND05_13325;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=NND05_13325 JANDXE010000035.1 Protein Homology CDS 4633 7974 . - 0 ID=cds-MCP9538508.1;Parent=gene-NND05_13325;Dbxref=NCBI_GP:MCP9538508.1;Name=MCP9538508.1;Ontology_term=GO:0006605,GO:0006886,GO:0005524,GO:0016020;gbkey=CDS;gene=secA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376488.1;locus_tag=NND05_13325;product=preprotein translocase subunit SecA;protein_id=MCP9538508.1;transl_table=11 JANDXE010000035.1 Genbank gene 8211 8570 . - . ID=gene-NND05_13330;Name=NND05_13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13330 JANDXE010000035.1 Protein Homology CDS 8211 8570 . - 0 ID=cds-MCP9538509.1;Parent=gene-NND05_13330;Dbxref=NCBI_GP:MCP9538509.1;Name=MCP9538509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341806.1;locus_tag=NND05_13330;product=hypothetical protein;protein_id=MCP9538509.1;transl_table=11 JANDXE010000035.1 Genbank gene 8650 9927 . - . ID=gene-NND05_13335;Name=NND05_13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13335 JANDXE010000035.1 Protein Homology CDS 8650 9927 . - 0 ID=cds-MCP9538510.1;Parent=gene-NND05_13335;Dbxref=NCBI_GP:MCP9538510.1;Name=MCP9538510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411002.1;locus_tag=NND05_13335;product=DUF4105 domain-containing protein;protein_id=MCP9538510.1;transl_table=11 JANDXE010000035.1 Genbank gene 10094 11386 . + . ID=gene-NND05_13340;Name=NND05_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13340 JANDXE010000035.1 Protein Homology CDS 10094 11386 . + 0 ID=cds-MCP9538511.1;Parent=gene-NND05_13340;Dbxref=NCBI_GP:MCP9538511.1;Name=MCP9538511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359886.1;locus_tag=NND05_13340;product=hypothetical protein;protein_id=MCP9538511.1;transl_table=11 JANDXE010000035.1 Genbank gene 11444 12103 . + . ID=gene-NND05_13345;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=NND05_13345 JANDXE010000035.1 Protein Homology CDS 11444 12103 . + 0 ID=cds-MCP9538512.1;Parent=gene-NND05_13345;Dbxref=NCBI_GP:MCP9538512.1;Name=MCP9538512.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846426.1;locus_tag=NND05_13345;product=LPS export ABC transporter periplasmic protein LptC;protein_id=MCP9538512.1;transl_table=11 JANDXE010000035.1 Genbank gene 12145 13413 . + . ID=gene-NND05_13350;Name=NND05_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13350 JANDXE010000035.1 Protein Homology CDS 12145 13413 . + 0 ID=cds-MCP9538513.1;Parent=gene-NND05_13350;Dbxref=NCBI_GP:MCP9538513.1;Name=MCP9538513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008563813.1;locus_tag=NND05_13350;product=hemolysin family protein;protein_id=MCP9538513.1;transl_table=11 JANDXE010000035.1 Genbank gene 13588 15738 . + . ID=gene-NND05_13355;Name=NND05_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13355 JANDXE010000035.1 Protein Homology CDS 13588 15738 . + 0 ID=cds-MCP9538514.1;Parent=gene-NND05_13355;Dbxref=NCBI_GP:MCP9538514.1;Name=MCP9538514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004374865.1;locus_tag=NND05_13355;product=SurA N-terminal domain-containing protein;protein_id=MCP9538514.1;transl_table=11 JANDXE010000035.1 Genbank gene 15874 18345 . - . ID=gene-NND05_13360;Name=NND05_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13360 JANDXE010000035.1 Protein Homology CDS 15874 18345 . - 0 ID=cds-MCP9538515.1;Parent=gene-NND05_13360;Dbxref=NCBI_GP:MCP9538515.1;Name=MCP9538515.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370280.1;locus_tag=NND05_13360;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=MCP9538515.1;transl_table=11 JANDXE010000035.1 Genbank gene 18404 19282 . - . ID=gene-NND05_13365;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NND05_13365 JANDXE010000035.1 Protein Homology CDS 18404 19282 . - 0 ID=cds-MCP9538516.1;Parent=gene-NND05_13365;Dbxref=NCBI_GP:MCP9538516.1;Name=MCP9538516.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235302.1;locus_tag=NND05_13365;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=MCP9538516.1;transl_table=11 JANDXE010000035.1 Genbank gene 19580 20230 . + . ID=gene-NND05_13370;Name=NND05_13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13370 JANDXE010000035.1 Protein Homology CDS 19580 20230 . + 0 ID=cds-MCP9538517.1;Parent=gene-NND05_13370;Dbxref=NCBI_GP:MCP9538517.1;Name=MCP9538517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846432.1;locus_tag=NND05_13370;product=hypothetical protein;protein_id=MCP9538517.1;transl_table=11 JANDXE010000035.1 Genbank gene 20321 20614 . + . ID=gene-NND05_13375;Name=NND05_13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13375 JANDXE010000035.1 Protein Homology CDS 20321 20614 . + 0 ID=cds-MCP9538518.1;Parent=gene-NND05_13375;Dbxref=NCBI_GP:MCP9538518.1;Name=MCP9538518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360861.1;locus_tag=NND05_13375;product=hypothetical protein;protein_id=MCP9538518.1;transl_table=11 JANDXE010000035.1 Genbank gene 20641 20931 . + . ID=gene-NND05_13380;Name=NND05_13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13380 JANDXE010000035.1 Protein Homology CDS 20641 20931 . + 0 ID=cds-MCP9538519.1;Parent=gene-NND05_13380;Dbxref=NCBI_GP:MCP9538519.1;Name=MCP9538519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004357991.1;locus_tag=NND05_13380;product=cell division protein ZapA;protein_id=MCP9538519.1;transl_table=11 JANDXE010000035.1 Genbank gene 20957 22489 . + . ID=gene-NND05_13385;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=NND05_13385 JANDXE010000035.1 Protein Homology CDS 20957 22489 . + 0 ID=cds-MCP9538520.1;Parent=gene-NND05_13385;Dbxref=NCBI_GP:MCP9538520.1;Name=MCP9538520.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342251.1;locus_tag=NND05_13385;product=ribonuclease Y;protein_id=MCP9538520.1;transl_table=11 JANDXE010000035.1 Genbank gene 22653 23348 . + . ID=gene-NND05_13390;Name=NND05_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13390 JANDXE010000035.1 Protein Homology CDS 22653 23348 . + 0 ID=cds-MCP9538521.1;Parent=gene-NND05_13390;Dbxref=NCBI_GP:MCP9538521.1;Name=MCP9538521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007748120.1;locus_tag=NND05_13390;product=tRNA 2-thiocytidine biosynthesis TtcA family protein;protein_id=MCP9538521.1;transl_table=11 JANDXE010000035.1 Genbank gene 23426 24409 . - . ID=gene-NND05_13395;Name=NND05_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13395 JANDXE010000035.1 Protein Homology CDS 23426 24409 . - 0 ID=cds-MCP9538522.1;Parent=gene-NND05_13395;Dbxref=NCBI_GP:MCP9538522.1;Name=MCP9538522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_13395;product=site-specific integrase;protein_id=MCP9538522.1;transl_table=11 JANDXE010000035.1 Genbank gene 24965 26305 . + . ID=gene-NND05_13400;Name=NND05_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13400 JANDXE010000035.1 Protein Homology CDS 24965 26305 . + 0 ID=cds-MCP9538523.1;Parent=gene-NND05_13400;Dbxref=NCBI_GP:MCP9538523.1;Name=MCP9538523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019150889.1;locus_tag=NND05_13400;product=DUF3575 domain-containing protein;protein_id=MCP9538523.1;transl_table=11 JANDXE010000035.1 Genbank gene 26302 27306 . + . ID=gene-NND05_13405;Name=NND05_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13405 JANDXE010000035.1 Protein Homology CDS 26302 27306 . + 0 ID=cds-MCP9538524.1;Parent=gene-NND05_13405;Dbxref=NCBI_GP:MCP9538524.1;Name=MCP9538524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017382.1;locus_tag=NND05_13405;product=DUF5119 domain-containing protein;protein_id=MCP9538524.1;transl_table=11 JANDXE010000035.1 Genbank gene 27405 28544 . + . ID=gene-NND05_13410;Name=NND05_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13410 JANDXE010000035.1 Protein Homology CDS 27405 28544 . + 0 ID=cds-MCP9538525.1;Parent=gene-NND05_13410;Dbxref=NCBI_GP:MCP9538525.1;Name=MCP9538525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_13410;product=fimbrillin family protein;protein_id=MCP9538525.1;transl_table=11 JANDXE010000035.1 Genbank gene 28667 31462 . + . ID=gene-NND05_13415;Name=NND05_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13415 JANDXE010000035.1 Protein Homology CDS 28667 31462 . + 0 ID=cds-MCP9538526.1;Parent=gene-NND05_13415;Dbxref=NCBI_GP:MCP9538526.1;Name=MCP9538526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_13415;product=fimbrillin family protein;protein_id=MCP9538526.1;transl_table=11 JANDXE010000035.1 Genbank gene 32305 32870 . - . ID=gene-NND05_13420;Name=NND05_13420;end_range=32870,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13420;partial=true JANDXE010000035.1 GeneMarkS-2+ CDS 32305 32870 . - 2 ID=cds-MCP9538527.1;Parent=gene-NND05_13420;Dbxref=NCBI_GP:MCP9538527.1;Name=MCP9538527.1;end_range=32870,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13420;partial=true;product=hypothetical protein;protein_id=MCP9538527.1;transl_table=11 ##sequence-region JANDXE010000036.1 1 31475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000036.1 Genbank region 1 31475 . + . ID=JANDXE010000036.1:1..31475;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000036.1 Genbank gene 318 911 . + . ID=gene-NND05_13425;Name=NND05_13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13425 JANDXE010000036.1 Protein Homology CDS 318 911 . + 0 ID=cds-MCP9538528.1;Parent=gene-NND05_13425;Dbxref=NCBI_GP:MCP9538528.1;Name=MCP9538528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017116.2;locus_tag=NND05_13425;product=virulence-associated E family protein;protein_id=MCP9538528.1;transl_table=11 JANDXE010000036.1 Genbank gene 1180 2334 . - . ID=gene-NND05_13430;Name=NND05_13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13430 JANDXE010000036.1 Protein Homology CDS 1180 2334 . - 0 ID=cds-MCP9538529.1;Parent=gene-NND05_13430;Dbxref=NCBI_GP:MCP9538529.1;Name=MCP9538529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028479.2;locus_tag=NND05_13430;product=6-bladed beta-propeller;protein_id=MCP9538529.1;transl_table=11 JANDXE010000036.1 Genbank gene 2427 2708 . - . ID=gene-NND05_13435;Name=NND05_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13435 JANDXE010000036.1 GeneMarkS-2+ CDS 2427 2708 . - 0 ID=cds-MCP9538530.1;Parent=gene-NND05_13435;Dbxref=NCBI_GP:MCP9538530.1;Name=MCP9538530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13435;product=hypothetical protein;protein_id=MCP9538530.1;transl_table=11 JANDXE010000036.1 Genbank gene 2708 3271 . - . ID=gene-NND05_13440;Name=NND05_13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13440 JANDXE010000036.1 GeneMarkS-2+ CDS 2708 3271 . - 0 ID=cds-MCP9538531.1;Parent=gene-NND05_13440;Dbxref=NCBI_GP:MCP9538531.1;Name=MCP9538531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13440;product=hypothetical protein;protein_id=MCP9538531.1;transl_table=11 JANDXE010000036.1 Genbank gene 3285 3644 . - . ID=gene-NND05_13445;Name=NND05_13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13445 JANDXE010000036.1 GeneMarkS-2+ CDS 3285 3644 . - 0 ID=cds-MCP9538532.1;Parent=gene-NND05_13445;Dbxref=NCBI_GP:MCP9538532.1;Name=MCP9538532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13445;product=hypothetical protein;protein_id=MCP9538532.1;transl_table=11 JANDXE010000036.1 Genbank gene 3818 5518 . - . ID=gene-NND05_13450;Name=NND05_13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13450 JANDXE010000036.1 GeneMarkS-2+ CDS 3818 5518 . - 0 ID=cds-MCP9538533.1;Parent=gene-NND05_13450;Dbxref=NCBI_GP:MCP9538533.1;Name=MCP9538533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13450;product=hypothetical protein;protein_id=MCP9538533.1;transl_table=11 JANDXE010000036.1 Genbank gene 7181 7339 . + . ID=gene-NND05_13455;Name=NND05_13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13455 JANDXE010000036.1 GeneMarkS-2+ CDS 7181 7339 . + 0 ID=cds-MCP9538534.1;Parent=gene-NND05_13455;Dbxref=NCBI_GP:MCP9538534.1;Name=MCP9538534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13455;product=hypothetical protein;protein_id=MCP9538534.1;transl_table=11 JANDXE010000036.1 Genbank gene 7504 8631 . + . ID=gene-NND05_13460;Name=NND05_13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13460 JANDXE010000036.1 GeneMarkS-2+ CDS 7504 8631 . + 0 ID=cds-MCP9538535.1;Parent=gene-NND05_13460;Dbxref=NCBI_GP:MCP9538535.1;Name=MCP9538535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13460;product=hypothetical protein;protein_id=MCP9538535.1;transl_table=11 JANDXE010000036.1 Genbank gene 8889 9935 . + . ID=gene-NND05_13465;Name=NND05_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13465 JANDXE010000036.1 GeneMarkS-2+ CDS 8889 9935 . + 0 ID=cds-MCP9538536.1;Parent=gene-NND05_13465;Dbxref=NCBI_GP:MCP9538536.1;Name=MCP9538536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13465;product=hypothetical protein;protein_id=MCP9538536.1;transl_table=11 JANDXE010000036.1 Genbank gene 9977 11902 . + . ID=gene-NND05_13470;Name=NND05_13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13470 JANDXE010000036.1 GeneMarkS-2+ CDS 9977 11902 . + 0 ID=cds-MCP9538537.1;Parent=gene-NND05_13470;Dbxref=NCBI_GP:MCP9538537.1;Name=MCP9538537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13470;product=hypothetical protein;protein_id=MCP9538537.1;transl_table=11 JANDXE010000036.1 Genbank gene 12134 13657 . + . ID=gene-NND05_13475;Name=NND05_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13475 JANDXE010000036.1 GeneMarkS-2+ CDS 12134 13657 . + 0 ID=cds-MCP9538538.1;Parent=gene-NND05_13475;Dbxref=NCBI_GP:MCP9538538.1;Name=MCP9538538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13475;product=hypothetical protein;protein_id=MCP9538538.1;transl_table=11 JANDXE010000036.1 Genbank gene 13722 15200 . + . ID=gene-NND05_13480;Name=NND05_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13480 JANDXE010000036.1 Protein Homology CDS 13722 15200 . + 0 ID=cds-MCP9538539.1;Parent=gene-NND05_13480;Dbxref=NCBI_GP:MCP9538539.1;Name=MCP9538539.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008629604.1;locus_tag=NND05_13480;product=TolC family protein;protein_id=MCP9538539.1;transl_table=11 JANDXE010000036.1 Genbank gene 15206 16285 . + . ID=gene-NND05_13485;Name=NND05_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13485 JANDXE010000036.1 Protein Homology CDS 15206 16285 . + 0 ID=cds-MCP9538540.1;Parent=gene-NND05_13485;Dbxref=NCBI_GP:MCP9538540.1;Name=MCP9538540.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=NND05_13485;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9538540.1;transl_table=11 JANDXE010000036.1 Genbank gene 16301 19381 . + . ID=gene-NND05_13490;Name=NND05_13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13490 JANDXE010000036.1 Protein Homology CDS 16301 19381 . + 0 ID=cds-MCP9538541.1;Parent=gene-NND05_13490;Dbxref=NCBI_GP:MCP9538541.1;Name=MCP9538541.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008622072.1;locus_tag=NND05_13490;product=efflux RND transporter permease subunit;protein_id=MCP9538541.1;transl_table=11 JANDXE010000036.1 Genbank gene 19388 22567 . + . ID=gene-NND05_13495;Name=NND05_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13495 JANDXE010000036.1 Protein Homology CDS 19388 22567 . + 0 ID=cds-MCP9538542.1;Parent=gene-NND05_13495;Dbxref=NCBI_GP:MCP9538542.1;Name=MCP9538542.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464103.1;locus_tag=NND05_13495;product=efflux RND transporter permease subunit;protein_id=MCP9538542.1;transl_table=11 JANDXE010000036.1 Genbank gene 22600 23232 . + . ID=gene-NND05_13500;Name=NND05_13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13500 JANDXE010000036.1 GeneMarkS-2+ CDS 22600 23232 . + 0 ID=cds-MCP9538543.1;Parent=gene-NND05_13500;Dbxref=NCBI_GP:MCP9538543.1;Name=MCP9538543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13500;product=hypothetical protein;protein_id=MCP9538543.1;transl_table=11 JANDXE010000036.1 Genbank gene 23406 23942 . + . ID=gene-NND05_13505;Name=NND05_13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13505 JANDXE010000036.1 GeneMarkS-2+ CDS 23406 23942 . + 0 ID=cds-MCP9538544.1;Parent=gene-NND05_13505;Dbxref=NCBI_GP:MCP9538544.1;Name=MCP9538544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13505;product=hypothetical protein;protein_id=MCP9538544.1;transl_table=11 JANDXE010000036.1 Genbank gene 23957 24217 . + . ID=gene-NND05_13510;Name=NND05_13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13510 JANDXE010000036.1 GeneMarkS-2+ CDS 23957 24217 . + 0 ID=cds-MCP9538545.1;Parent=gene-NND05_13510;Dbxref=NCBI_GP:MCP9538545.1;Name=MCP9538545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13510;product=NVEALA domain-containing protein;protein_id=MCP9538545.1;transl_table=11 JANDXE010000036.1 Genbank gene 24276 25361 . + . ID=gene-NND05_13515;Name=NND05_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13515 JANDXE010000036.1 GeneMarkS-2+ CDS 24276 25361 . + 0 ID=cds-MCP9538546.1;Parent=gene-NND05_13515;Dbxref=NCBI_GP:MCP9538546.1;Name=MCP9538546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13515;product=TolB-like 6-bladed beta-propeller domain-containing protein;protein_id=MCP9538546.1;transl_table=11 JANDXE010000036.1 Genbank gene 25421 26431 . + . ID=gene-NND05_13520;Name=NND05_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13520 JANDXE010000036.1 Protein Homology CDS 25421 26431 . + 0 ID=cds-MCP9538547.1;Parent=gene-NND05_13520;Dbxref=NCBI_GP:MCP9538547.1;Name=MCP9538547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027202.2;locus_tag=NND05_13520;product=TolB-like 6-bladed beta-propeller domain-containing protein;protein_id=MCP9538547.1;transl_table=11 JANDXE010000036.1 Genbank gene 26962 28173 . + . ID=gene-NND05_13525;Name=NND05_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13525 JANDXE010000036.1 Protein Homology CDS 26962 28173 . + 0 ID=cds-MCP9538548.1;Parent=gene-NND05_13525;Dbxref=NCBI_GP:MCP9538548.1;Name=MCP9538548.1;Ontology_term=GO:0006102,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=isocitrate metabolic process|0006102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848521.1;locus_tag=NND05_13525;product=NADP-dependent isocitrate dehydrogenase;protein_id=MCP9538548.1;transl_table=11 JANDXE010000036.1 Genbank gene 28450 29145 . + . ID=gene-NND05_13530;Name=NND05_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13530 JANDXE010000036.1 Protein Homology CDS 28450 29145 . + 0 ID=cds-MCP9538549.1;Parent=gene-NND05_13530;Dbxref=NCBI_GP:MCP9538549.1;Name=MCP9538549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848519.1;locus_tag=NND05_13530;product=response regulator transcription factor;protein_id=MCP9538549.1;transl_table=11 JANDXE010000036.1 Genbank gene 29205 30665 . + . ID=gene-NND05_13535;Name=NND05_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13535 JANDXE010000036.1 Protein Homology CDS 29205 30665 . + 0 ID=cds-MCP9538550.1;Parent=gene-NND05_13535;Dbxref=NCBI_GP:MCP9538550.1;Name=MCP9538550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848518.1;locus_tag=NND05_13535;product=ATP-binding protein;protein_id=MCP9538550.1;transl_table=11 JANDXE010000036.1 Genbank gene 31138 31475 . + . ID=gene-NND05_13540;Name=NND05_13540;end_range=31475,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_13540;partial=true JANDXE010000036.1 cmsearch rRNA 31138 31475 . + . ID=rna-NND05_13540;Parent=gene-NND05_13540;Dbxref=RFAM:RF00177;end_range=31475,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_13540;partial=true;product=16S ribosomal RNA JANDXE010000036.1 cmsearch exon 31138 31475 . + . ID=exon-NND05_13540-1;Parent=rna-NND05_13540;Dbxref=RFAM:RF00177;end_range=31475,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_13540;partial=true;product=16S ribosomal RNA ##sequence-region JANDXE010000037.1 1 31426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000037.1 Genbank region 1 31426 . + . ID=JANDXE010000037.1:1..31426;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000037.1 Genbank gene 1 86 . + . ID=gene-NND05_13545;Name=NND05_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13545;partial=true;start_range=.,1 JANDXE010000037.1 Protein Homology CDS 1 86 . + 2 ID=cds-MCP9538551.1;Parent=gene-NND05_13545;Dbxref=NCBI_GP:MCP9538551.1;Name=MCP9538551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_13545;partial=true;product=DUF3408 domain-containing protein;protein_id=MCP9538551.1;start_range=.,1;transl_table=11 JANDXE010000037.1 Genbank gene 271 681 . + . ID=gene-NND05_13550;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=NND05_13550 JANDXE010000037.1 Protein Homology CDS 271 681 . + 0 ID=cds-MCP9538552.1;Parent=gene-NND05_13550;Dbxref=NCBI_GP:MCP9538552.1;Name=MCP9538552.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628605.1;locus_tag=NND05_13550;product=plasmid mobilization relaxosome protein MobC;protein_id=MCP9538552.1;transl_table=11 JANDXE010000037.1 Genbank gene 678 1628 . + . ID=gene-NND05_13555;Name=NND05_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13555 JANDXE010000037.1 Protein Homology CDS 678 1628 . + 0 ID=cds-MCP9538553.1;Parent=gene-NND05_13555;Dbxref=NCBI_GP:MCP9538553.1;Name=MCP9538553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656563.1;locus_tag=NND05_13555;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MCP9538553.1;transl_table=11 JANDXE010000037.1 Genbank gene 1669 2403 . + . ID=gene-NND05_13560;Name=NND05_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13560 JANDXE010000037.1 Protein Homology CDS 1669 2403 . + 0 ID=cds-MCP9538554.1;Parent=gene-NND05_13560;Dbxref=NCBI_GP:MCP9538554.1;Name=MCP9538554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055852.1;locus_tag=NND05_13560;product=hypothetical protein;protein_id=MCP9538554.1;transl_table=11 JANDXE010000037.1 Genbank gene 2619 4871 . + . ID=gene-NND05_13565;Name=NND05_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13565 JANDXE010000037.1 Protein Homology CDS 2619 4871 . + 0 ID=cds-MCP9538555.1;Parent=gene-NND05_13565;Dbxref=NCBI_GP:MCP9538555.1;Name=MCP9538555.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_13565;product=outer membrane beta-barrel protein;protein_id=MCP9538555.1;transl_table=11 JANDXE010000037.1 Genbank gene 5703 6203 . - . ID=gene-NND05_13570;Name=NND05_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13570 JANDXE010000037.1 Protein Homology CDS 5703 6203 . - 0 ID=cds-MCP9538556.1;Parent=gene-NND05_13570;Dbxref=NCBI_GP:MCP9538556.1;Name=MCP9538556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849203.1;locus_tag=NND05_13570;product=pyruvate ferredoxin oxidoreductase;protein_id=MCP9538556.1;transl_table=11 JANDXE010000037.1 Genbank gene 6193 6708 . - . ID=gene-NND05_13575;Name=NND05_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13575 JANDXE010000037.1 Protein Homology CDS 6193 6708 . - 0 ID=cds-MCP9538557.1;Parent=gene-NND05_13575;Dbxref=NCBI_GP:MCP9538557.1;Name=MCP9538557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353958.1;locus_tag=NND05_13575;product=RNA polymerase sigma factor;protein_id=MCP9538557.1;transl_table=11 JANDXE010000037.1 Genbank gene 6774 7547 . - . ID=gene-NND05_13580;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=NND05_13580 JANDXE010000037.1 Protein Homology CDS 6774 7547 . - 0 ID=cds-MCP9538558.1;Parent=gene-NND05_13580;Dbxref=NCBI_GP:MCP9538558.1;Name=MCP9538558.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849201.1;locus_tag=NND05_13580;product=acetylglutamate kinase;protein_id=MCP9538558.1;transl_table=11 JANDXE010000037.1 Genbank gene 7567 9459 . - . ID=gene-NND05_13585;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=NND05_13585 JANDXE010000037.1 Protein Homology CDS 7567 9459 . - 0 ID=cds-MCP9538559.1;Parent=gene-NND05_13585;Dbxref=NCBI_GP:MCP9538559.1;Name=MCP9538559.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008767598.1;locus_tag=NND05_13585;product=biosynthetic arginine decarboxylase;protein_id=MCP9538559.1;transl_table=11 JANDXE010000037.1 Genbank gene 9568 10095 . - . ID=gene-NND05_13590;Name=NND05_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13590 JANDXE010000037.1 Protein Homology CDS 9568 10095 . - 0 ID=cds-MCP9538560.1;Parent=gene-NND05_13590;Dbxref=NCBI_GP:MCP9538560.1;Name=MCP9538560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919764.1;locus_tag=NND05_13590;product=shikimate kinase;protein_id=MCP9538560.1;transl_table=11 JANDXE010000037.1 Genbank gene 10097 12433 . - . ID=gene-NND05_13595;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=NND05_13595 JANDXE010000037.1 Protein Homology CDS 10097 12433 . - 0 ID=cds-MCP9538561.1;Parent=gene-NND05_13595;Dbxref=NCBI_GP:MCP9538561.1;Name=MCP9538561.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845602.1;locus_tag=NND05_13595;product=type I DNA topoisomerase;protein_id=MCP9538561.1;transl_table=11 JANDXE010000037.1 Genbank gene 12540 13073 . - . ID=gene-NND05_13600;Name=NND05_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13600 JANDXE010000037.1 Protein Homology CDS 12540 13073 . - 0 ID=cds-MCP9538562.1;Parent=gene-NND05_13600;Dbxref=NCBI_GP:MCP9538562.1;Name=MCP9538562.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618930.1;locus_tag=NND05_13600;product=NUDIX domain-containing protein;protein_id=MCP9538562.1;transl_table=11 JANDXE010000037.1 Genbank gene 13137 14591 . - . ID=gene-NND05_13605;Name=NND05_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13605 JANDXE010000037.1 Protein Homology CDS 13137 14591 . - 0 ID=cds-MCP9538563.1;Parent=gene-NND05_13605;Dbxref=NCBI_GP:MCP9538563.1;Name=MCP9538563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849195.1;locus_tag=NND05_13605;product=sialate O-acetylesterase;protein_id=MCP9538563.1;transl_table=11 JANDXE010000037.1 Genbank gene 14712 15890 . - . ID=gene-NND05_13610;Name=NND05_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13610 JANDXE010000037.1 Protein Homology CDS 14712 15890 . - 0 ID=cds-MCP9538564.1;Parent=gene-NND05_13610;Dbxref=NCBI_GP:MCP9538564.1;Name=MCP9538564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378386.1;locus_tag=NND05_13610;product=AhpC/TSA family protein;protein_id=MCP9538564.1;transl_table=11 JANDXE010000037.1 Genbank gene 16085 18403 . + . ID=gene-NND05_13615;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NND05_13615 JANDXE010000037.1 Protein Homology CDS 16085 18403 . + 0 ID=cds-MCP9538565.1;Parent=gene-NND05_13615;Dbxref=NCBI_GP:MCP9538565.1;Name=MCP9538565.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369298.1;locus_tag=NND05_13615;product=polyribonucleotide nucleotidyltransferase;protein_id=MCP9538565.1;transl_table=11 JANDXE010000037.1 Genbank gene 18726 18799 . - . ID=gene-NND05_13620;Name=NND05_13620;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_13620 JANDXE010000037.1 tRNAscan-SE tRNA 18726 18799 . - . ID=rna-NND05_13620;Parent=gene-NND05_13620;anticodon=(pos:complement(18763..18765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_13620;product=tRNA-Asn JANDXE010000037.1 tRNAscan-SE exon 18726 18799 . - . ID=exon-NND05_13620-1;Parent=rna-NND05_13620;anticodon=(pos:complement(18763..18765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_13620;product=tRNA-Asn JANDXE010000037.1 Genbank gene 18850 18923 . - . ID=gene-NND05_13625;Name=NND05_13625;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_13625 JANDXE010000037.1 tRNAscan-SE tRNA 18850 18923 . - . ID=rna-NND05_13625;Parent=gene-NND05_13625;anticodon=(pos:complement(18887..18889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_13625;product=tRNA-Asn JANDXE010000037.1 tRNAscan-SE exon 18850 18923 . - . ID=exon-NND05_13625-1;Parent=rna-NND05_13625;anticodon=(pos:complement(18887..18889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_13625;product=tRNA-Asn JANDXE010000037.1 Genbank gene 19135 20799 . + . ID=gene-NND05_13630;Name=NND05_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13630 JANDXE010000037.1 Protein Homology CDS 19135 20799 . + 0 ID=cds-MCP9538566.1;Parent=gene-NND05_13630;Dbxref=NCBI_GP:MCP9538566.1;Name=MCP9538566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849191.1;locus_tag=NND05_13630;product=S41 family peptidase;protein_id=MCP9538566.1;transl_table=11 JANDXE010000037.1 Genbank gene 20954 21421 . + . ID=gene-NND05_13635;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NND05_13635 JANDXE010000037.1 Protein Homology CDS 20954 21421 . + 0 ID=cds-MCP9538567.1;Parent=gene-NND05_13635;Dbxref=NCBI_GP:MCP9538567.1;Name=MCP9538567.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967687.1;locus_tag=NND05_13635;product=ribosome assembly cofactor RimP;protein_id=MCP9538567.1;transl_table=11 JANDXE010000037.1 Genbank gene 21425 22687 . + . ID=gene-NND05_13640;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=NND05_13640 JANDXE010000037.1 Protein Homology CDS 21425 22687 . + 0 ID=cds-MCP9538568.1;Parent=gene-NND05_13640;Dbxref=NCBI_GP:MCP9538568.1;Name=MCP9538568.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849189.1;locus_tag=NND05_13640;product=transcription termination factor NusA;protein_id=MCP9538568.1;transl_table=11 JANDXE010000037.1 Genbank gene 22751 25645 . + . ID=gene-NND05_13645;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=NND05_13645 JANDXE010000037.1 Protein Homology CDS 22751 25645 . + 0 ID=cds-MCP9538569.1;Parent=gene-NND05_13645;Dbxref=NCBI_GP:MCP9538569.1;Name=MCP9538569.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378130.1;locus_tag=NND05_13645;product=translation initiation factor IF-2;protein_id=MCP9538569.1;transl_table=11 JANDXE010000037.1 Genbank gene 25737 27188 . + . ID=gene-NND05_13650;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=NND05_13650 JANDXE010000037.1 Protein Homology CDS 25737 27188 . + 0 ID=cds-MCP9538570.1;Parent=gene-NND05_13650;Dbxref=NCBI_GP:MCP9538570.1;Name=MCP9538570.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849187.1;locus_tag=NND05_13650;product=Fe-S cluster assembly protein SufB;protein_id=MCP9538570.1;transl_table=11 JANDXE010000037.1 Genbank gene 27232 27987 . + . ID=gene-NND05_13655;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=NND05_13655 JANDXE010000037.1 Protein Homology CDS 27232 27987 . + 0 ID=cds-MCP9538571.1;Parent=gene-NND05_13655;Dbxref=NCBI_GP:MCP9538571.1;Name=MCP9538571.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341253.1;locus_tag=NND05_13655;product=Fe-S cluster assembly ATPase SufC;protein_id=MCP9538571.1;transl_table=11 JANDXE010000037.1 Genbank gene 28002 29345 . + . ID=gene-NND05_13660;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=NND05_13660 JANDXE010000037.1 Protein Homology CDS 28002 29345 . + 0 ID=cds-MCP9538572.1;Parent=gene-NND05_13660;Dbxref=NCBI_GP:MCP9538572.1;Name=MCP9538572.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823624.1;locus_tag=NND05_13660;product=Fe-S cluster assembly protein SufD;protein_id=MCP9538572.1;transl_table=11 JANDXE010000037.1 Genbank gene 29382 30596 . + . ID=gene-NND05_13665;Name=NND05_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13665 JANDXE010000037.1 Protein Homology CDS 29382 30596 . + 0 ID=cds-MCP9538573.1;Parent=gene-NND05_13665;Dbxref=NCBI_GP:MCP9538573.1;Name=MCP9538573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670913.1;locus_tag=NND05_13665;product=cysteine desulfurase;protein_id=MCP9538573.1;transl_table=11 JANDXE010000037.1 Genbank gene 30656 31264 . + . ID=gene-NND05_13670;Name=NND05_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13670 JANDXE010000037.1 Protein Homology CDS 30656 31264 . + 0 ID=cds-MCP9538574.1;Parent=gene-NND05_13670;Dbxref=NCBI_GP:MCP9538574.1;Name=MCP9538574.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016665457.1;locus_tag=NND05_13670;product=ribonuclease HII;protein_id=MCP9538574.1;transl_table=11 ##sequence-region JANDXE010000038.1 1 30850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000038.1 Genbank region 1 30850 . + . ID=JANDXE010000038.1:1..30850;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000038.1 Genbank gene 137 1018 . + . ID=gene-NND05_13675;Name=NND05_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13675 JANDXE010000038.1 GeneMarkS-2+ CDS 137 1018 . + 0 ID=cds-MCP9538575.1;Parent=gene-NND05_13675;Dbxref=NCBI_GP:MCP9538575.1;Name=MCP9538575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13675;product=hypothetical protein;protein_id=MCP9538575.1;transl_table=11 JANDXE010000038.1 Genbank gene 1024 2064 . + . ID=gene-NND05_13680;Name=NND05_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13680 JANDXE010000038.1 Protein Homology CDS 1024 2064 . + 0 ID=cds-MCP9538576.1;Parent=gene-NND05_13680;Dbxref=NCBI_GP:MCP9538576.1;Name=MCP9538576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005803182.1;locus_tag=NND05_13680;product=glycosyltransferase family 4 protein;protein_id=MCP9538576.1;transl_table=11 JANDXE010000038.1 Genbank gene 2106 3338 . + . ID=gene-NND05_13685;Name=NND05_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13685 JANDXE010000038.1 Protein Homology CDS 2106 3338 . + 0 ID=cds-MCP9538577.1;Parent=gene-NND05_13685;Dbxref=NCBI_GP:MCP9538577.1;Name=MCP9538577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008769762.1;locus_tag=NND05_13685;product=glycosyltransferase;protein_id=MCP9538577.1;transl_table=11 JANDXE010000038.1 Genbank gene 3459 5471 . + . ID=gene-NND05_13690;Name=NND05_13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13690 JANDXE010000038.1 Protein Homology CDS 3459 5471 . + 0 ID=cds-MCP9538578.1;Parent=gene-NND05_13690;Dbxref=NCBI_GP:MCP9538578.1;Name=MCP9538578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=NND05_13690;product=ATP-binding protein;protein_id=MCP9538578.1;transl_table=11 JANDXE010000038.1 Genbank gene 5458 6447 . + . ID=gene-NND05_13695;Name=NND05_13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13695 JANDXE010000038.1 GeneMarkS-2+ CDS 5458 6447 . + 0 ID=cds-MCP9538579.1;Parent=gene-NND05_13695;Dbxref=NCBI_GP:MCP9538579.1;Name=MCP9538579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13695;product=hypothetical protein;protein_id=MCP9538579.1;transl_table=11 JANDXE010000038.1 Genbank gene 6472 7608 . + . ID=gene-NND05_13700;Name=NND05_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13700 JANDXE010000038.1 GeneMarkS-2+ CDS 6472 7608 . + 0 ID=cds-MCP9538580.1;Parent=gene-NND05_13700;Dbxref=NCBI_GP:MCP9538580.1;Name=MCP9538580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13700;product=hypothetical protein;protein_id=MCP9538580.1;transl_table=11 JANDXE010000038.1 Genbank gene 7680 11243 . + . ID=gene-NND05_13705;Name=NND05_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13705 JANDXE010000038.1 GeneMarkS-2+ CDS 7680 11243 . + 0 ID=cds-MCP9538581.1;Parent=gene-NND05_13705;Dbxref=NCBI_GP:MCP9538581.1;Name=MCP9538581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13705;product=hypothetical protein;protein_id=MCP9538581.1;transl_table=11 JANDXE010000038.1 Genbank gene 11352 12845 . + . ID=gene-NND05_13710;Name=NND05_13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13710 JANDXE010000038.1 GeneMarkS-2+ CDS 11352 12845 . + 0 ID=cds-MCP9538582.1;Parent=gene-NND05_13710;Dbxref=NCBI_GP:MCP9538582.1;Name=MCP9538582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13710;product=hypothetical protein;protein_id=MCP9538582.1;transl_table=11 JANDXE010000038.1 Genbank gene 12881 13594 . + . ID=gene-NND05_13715;Name=NND05_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13715 JANDXE010000038.1 Protein Homology CDS 12881 13594 . + 0 ID=cds-MCP9538583.1;Parent=gene-NND05_13715;Dbxref=NCBI_GP:MCP9538583.1;Name=MCP9538583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004319211.1;locus_tag=NND05_13715;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=MCP9538583.1;transl_table=11 JANDXE010000038.1 Genbank gene 13596 14009 . + . ID=gene-NND05_13720;Name=NND05_13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13720 JANDXE010000038.1 GeneMarkS-2+ CDS 13596 14009 . + 0 ID=cds-MCP9538584.1;Parent=gene-NND05_13720;Dbxref=NCBI_GP:MCP9538584.1;Name=MCP9538584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13720;product=hypothetical protein;protein_id=MCP9538584.1;transl_table=11 JANDXE010000038.1 Genbank gene 14307 15140 . + . ID=gene-NND05_13725;Name=NND05_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13725 JANDXE010000038.1 Protein Homology CDS 14307 15140 . + 0 ID=cds-MCP9538585.1;Parent=gene-NND05_13725;Dbxref=NCBI_GP:MCP9538585.1;Name=MCP9538585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=NND05_13725;product=ParA family protein;protein_id=MCP9538585.1;transl_table=11 JANDXE010000038.1 Genbank gene 15146 15649 . + . ID=gene-NND05_13730;Name=NND05_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13730 JANDXE010000038.1 GeneMarkS-2+ CDS 15146 15649 . + 0 ID=cds-MCP9538586.1;Parent=gene-NND05_13730;Dbxref=NCBI_GP:MCP9538586.1;Name=MCP9538586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13730;product=hypothetical protein;protein_id=MCP9538586.1;transl_table=11 JANDXE010000038.1 Genbank gene 15630 16328 . + . ID=gene-NND05_13735;Name=NND05_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13735 JANDXE010000038.1 GeneMarkS-2+ CDS 15630 16328 . + 0 ID=cds-MCP9538587.1;Parent=gene-NND05_13735;Dbxref=NCBI_GP:MCP9538587.1;Name=MCP9538587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13735;product=hypothetical protein;protein_id=MCP9538587.1;transl_table=11 JANDXE010000038.1 Genbank gene 16498 16692 . + . ID=gene-NND05_13740;Name=NND05_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13740 JANDXE010000038.1 GeneMarkS-2+ CDS 16498 16692 . + 0 ID=cds-MCP9538588.1;Parent=gene-NND05_13740;Dbxref=NCBI_GP:MCP9538588.1;Name=MCP9538588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13740;product=hypothetical protein;protein_id=MCP9538588.1;transl_table=11 JANDXE010000038.1 Genbank gene 16798 18735 . + . ID=gene-NND05_13745;Name=NND05_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13745 JANDXE010000038.1 Protein Homology CDS 16798 18735 . + 0 ID=cds-MCP9538589.1;Parent=gene-NND05_13745;Dbxref=NCBI_GP:MCP9538589.1;Name=MCP9538589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=NND05_13745;product=ATP-binding protein;protein_id=MCP9538589.1;transl_table=11 JANDXE010000038.1 Genbank gene 18713 19687 . + . ID=gene-NND05_13750;Name=NND05_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13750 JANDXE010000038.1 Protein Homology CDS 18713 19687 . + 0 ID=cds-MCP9538590.1;Parent=gene-NND05_13750;Dbxref=NCBI_GP:MCP9538590.1;Name=MCP9538590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=NND05_13750;product=HNH endonuclease;protein_id=MCP9538590.1;transl_table=11 JANDXE010000038.1 Genbank pseudogene 19757 20044 . + . ID=gene-NND05_13755;Name=NND05_13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13755;pseudo=true JANDXE010000038.1 Protein Homology CDS 19757 20044 . + 0 ID=cds-NND05_13755;Parent=gene-NND05_13755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055718.1;locus_tag=NND05_13755;product=glycosyltransferase;pseudo=true;transl_table=11 JANDXE010000038.1 Genbank pseudogene 20162 20293 . + . ID=gene-NND05_13760;Name=NND05_13760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13760;pseudo=true JANDXE010000038.1 Protein Homology CDS 20162 20293 . + 0 ID=cds-NND05_13760;Parent=gene-NND05_13760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009039345.1;locus_tag=NND05_13760;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;pseudo=true;transl_table=11 JANDXE010000038.1 Genbank gene 20645 20917 . + . ID=gene-NND05_13765;Name=NND05_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13765 JANDXE010000038.1 GeneMarkS-2+ CDS 20645 20917 . + 0 ID=cds-MCP9538591.1;Parent=gene-NND05_13765;Dbxref=NCBI_GP:MCP9538591.1;Name=MCP9538591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13765;product=hypothetical protein;protein_id=MCP9538591.1;transl_table=11 JANDXE010000038.1 Genbank pseudogene 21117 21254 . + . ID=gene-NND05_13770;Name=NND05_13770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13770;pseudo=true JANDXE010000038.1 Protein Homology CDS 21117 21254 . + 0 ID=cds-NND05_13770;Parent=gene-NND05_13770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007846488.1;locus_tag=NND05_13770;product=glycosyltransferase;pseudo=true;transl_table=11 JANDXE010000038.1 Genbank gene 21758 21847 . + . ID=gene-NND05_13775;Name=NND05_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13775 JANDXE010000038.1 Protein Homology CDS 21758 21847 . + 0 ID=cds-MCP9538592.1;Parent=gene-NND05_13775;Dbxref=NCBI_GP:MCP9538592.1;Name=MCP9538592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027074.2;locus_tag=NND05_13775;product=type II toxin-antitoxin system YafQ family toxin;protein_id=MCP9538592.1;transl_table=11 JANDXE010000038.1 Genbank gene 22675 23640 . + . ID=gene-NND05_13780;Name=NND05_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13780 JANDXE010000038.1 Protein Homology CDS 22675 23640 . + 0 ID=cds-MCP9538593.1;Parent=gene-NND05_13780;Dbxref=NCBI_GP:MCP9538593.1;Name=MCP9538593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=NND05_13780;product=leucine-rich repeat domain-containing protein;protein_id=MCP9538593.1;transl_table=11 JANDXE010000038.1 Genbank gene 23664 24653 . + . ID=gene-NND05_13785;Name=NND05_13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13785 JANDXE010000038.1 GeneMarkS-2+ CDS 23664 24653 . + 0 ID=cds-MCP9538594.1;Parent=gene-NND05_13785;Dbxref=NCBI_GP:MCP9538594.1;Name=MCP9538594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13785;product=hypothetical protein;protein_id=MCP9538594.1;transl_table=11 JANDXE010000038.1 Genbank gene 24751 25017 . - . ID=gene-NND05_13790;Name=NND05_13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13790 JANDXE010000038.1 Protein Homology CDS 24751 25017 . - 0 ID=cds-MCP9538595.1;Parent=gene-NND05_13790;Dbxref=NCBI_GP:MCP9538595.1;Name=MCP9538595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264739.1;locus_tag=NND05_13790;product=helix-turn-helix domain-containing protein;protein_id=MCP9538595.1;transl_table=11 JANDXE010000038.1 Genbank gene 25443 25676 . + . ID=gene-NND05_13795;Name=NND05_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13795 JANDXE010000038.1 Protein Homology CDS 25443 25676 . + 0 ID=cds-MCP9538596.1;Parent=gene-NND05_13795;Dbxref=NCBI_GP:MCP9538596.1;Name=MCP9538596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848704.1;locus_tag=NND05_13795;product=dephospho-CoA kinase;protein_id=MCP9538596.1;transl_table=11 JANDXE010000038.1 Genbank gene 25687 26100 . + . ID=gene-NND05_13800;Name=NND05_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13800 JANDXE010000038.1 Protein Homology CDS 25687 26100 . + 0 ID=cds-MCP9538597.1;Parent=gene-NND05_13800;Dbxref=NCBI_GP:MCP9538597.1;Name=MCP9538597.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848703.1;locus_tag=NND05_13800;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=MCP9538597.1;transl_table=11 JANDXE010000038.1 Genbank gene 26237 26620 . + . ID=gene-NND05_13805;Name=NND05_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13805 JANDXE010000038.1 Protein Homology CDS 26237 26620 . + 0 ID=cds-MCP9538598.1;Parent=gene-NND05_13805;Dbxref=NCBI_GP:MCP9538598.1;Name=MCP9538598.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NND05_13805;product=MFS transporter;protein_id=MCP9538598.1;transl_table=11 JANDXE010000038.1 Genbank gene 26864 27646 . - . ID=gene-NND05_13810;Name=NND05_13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13810 JANDXE010000038.1 Protein Homology CDS 26864 27646 . - 0 ID=cds-MCP9538599.1;Parent=gene-NND05_13810;Dbxref=NCBI_GP:MCP9538599.1;Name=MCP9538599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846891.1;locus_tag=NND05_13810;product=HesA/MoeB/ThiF family protein;protein_id=MCP9538599.1;transl_table=11 JANDXE010000038.1 Genbank gene 27824 28249 . - . ID=gene-NND05_13815;Name=NND05_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13815 JANDXE010000038.1 Protein Homology CDS 27824 28249 . - 0 ID=cds-MCP9538600.1;Parent=gene-NND05_13815;Dbxref=NCBI_GP:MCP9538600.1;Name=MCP9538600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265101.1;locus_tag=NND05_13815;product=biotin/lipoyl-binding protein;protein_id=MCP9538600.1;transl_table=11 JANDXE010000038.1 Genbank gene 28260 28409 . - . ID=gene-NND05_13820;Name=NND05_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13820 JANDXE010000038.1 Protein Homology CDS 28260 28409 . - 0 ID=cds-MCP9538601.1;Parent=gene-NND05_13820;Dbxref=NCBI_GP:MCP9538601.1;Name=MCP9538601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174225.1;locus_tag=NND05_13820;product=hypothetical protein;protein_id=MCP9538601.1;transl_table=11 JANDXE010000038.1 Genbank gene 28486 30051 . - . ID=gene-NND05_13825;Name=NND05_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13825 JANDXE010000038.1 Protein Homology CDS 28486 30051 . - 0 ID=cds-MCP9538602.1;Parent=gene-NND05_13825;Dbxref=NCBI_GP:MCP9538602.1;Name=MCP9538602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338671.1;locus_tag=NND05_13825;product=acyl-CoA carboxylase subunit beta;protein_id=MCP9538602.1;transl_table=11 JANDXE010000038.1 Genbank gene 30555 30850 . + . ID=gene-NND05_13830;Name=NND05_13830;end_range=30850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13830;partial=true JANDXE010000038.1 Protein Homology CDS 30555 30850 . + 0 ID=cds-MCP9538603.1;Parent=gene-NND05_13830;Dbxref=NCBI_GP:MCP9538603.1;Name=MCP9538603.1;end_range=30850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942360.1;locus_tag=NND05_13830;partial=true;product=Arm DNA-binding domain-containing protein;protein_id=MCP9538603.1;transl_table=11 ##sequence-region JANDXE010000039.1 1 27830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000039.1 Genbank region 1 27830 . + . ID=JANDXE010000039.1:1..27830;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000039.1 Genbank gene 139 483 . - . ID=gene-NND05_13835;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=NND05_13835 JANDXE010000039.1 Protein Homology CDS 139 483 . - 0 ID=cds-MCP9538604.1;Parent=gene-NND05_13835;Dbxref=NCBI_GP:MCP9538604.1;Name=MCP9538604.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847275.1;locus_tag=NND05_13835;product=50S ribosomal protein L20;protein_id=MCP9538604.1;transl_table=11 JANDXE010000039.1 Genbank gene 523 720 . - . ID=gene-NND05_13840;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NND05_13840 JANDXE010000039.1 Protein Homology CDS 523 720 . - 0 ID=cds-MCP9538605.1;Parent=gene-NND05_13840;Dbxref=NCBI_GP:MCP9538605.1;Name=MCP9538605.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464711.1;locus_tag=NND05_13840;product=50S ribosomal protein L35;protein_id=MCP9538605.1;transl_table=11 JANDXE010000039.1 Genbank gene 800 1486 . - . ID=gene-NND05_13845;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NND05_13845 JANDXE010000039.1 Protein Homology CDS 800 1486 . - 0 ID=cds-MCP9538606.1;Parent=gene-NND05_13845;Dbxref=NCBI_GP:MCP9538606.1;Name=MCP9538606.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846866.1;locus_tag=NND05_13845;product=translation initiation factor IF-3;protein_id=MCP9538606.1;transl_table=11 JANDXE010000039.1 Genbank gene 1627 3579 . - . ID=gene-NND05_13850;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NND05_13850 JANDXE010000039.1 Protein Homology CDS 1627 3579 . - 0 ID=cds-MCP9538607.1;Parent=gene-NND05_13850;Dbxref=NCBI_GP:MCP9538607.1;Name=MCP9538607.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846868.1;locus_tag=NND05_13850;product=threonine--tRNA ligase;protein_id=MCP9538607.1;transl_table=11 JANDXE010000039.1 Genbank gene 3888 4919 . + . ID=gene-NND05_13855;Name=NND05_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13855 JANDXE010000039.1 Protein Homology CDS 3888 4919 . + 0 ID=cds-MCP9538608.1;Parent=gene-NND05_13855;Dbxref=NCBI_GP:MCP9538608.1;Name=MCP9538608.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846869.1;locus_tag=NND05_13855;product=type I asparaginase;protein_id=MCP9538608.1;transl_table=11 JANDXE010000039.1 Genbank gene 5755 7332 . - . ID=gene-NND05_13860;Name=NND05_13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13860 JANDXE010000039.1 Protein Homology CDS 5755 7332 . - 0 ID=cds-MCP9538609.1;Parent=gene-NND05_13860;Dbxref=NCBI_GP:MCP9538609.1;Name=MCP9538609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846870.1;locus_tag=NND05_13860;product=DUF4301 family protein;protein_id=MCP9538609.1;transl_table=11 JANDXE010000039.1 Genbank gene 8002 10221 . + . ID=gene-NND05_13865;Name=NND05_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13865 JANDXE010000039.1 Protein Homology CDS 8002 10221 . + 0 ID=cds-MCP9538610.1;Parent=gene-NND05_13865;Dbxref=NCBI_GP:MCP9538610.1;Name=MCP9538610.1;Ontology_term=GO:0015968,GO:0015969,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=stringent response|0015968||IEA,guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346734.1;locus_tag=NND05_13865;product=RelA/SpoT family protein;protein_id=MCP9538610.1;transl_table=11 JANDXE010000039.1 Genbank gene 10345 12306 . - . ID=gene-NND05_13870;Name=NND05_13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13870 JANDXE010000039.1 Protein Homology CDS 10345 12306 . - 0 ID=cds-MCP9538611.1;Parent=gene-NND05_13870;Dbxref=NCBI_GP:MCP9538611.1;Name=MCP9538611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368248.1;locus_tag=NND05_13870;product=tetratricopeptide repeat protein;protein_id=MCP9538611.1;transl_table=11 JANDXE010000039.1 Genbank gene 12303 12863 . - . ID=gene-NND05_13875;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NND05_13875 JANDXE010000039.1 Protein Homology CDS 12303 12863 . - 0 ID=cds-MCP9538612.1;Parent=gene-NND05_13875;Dbxref=NCBI_GP:MCP9538612.1;Name=MCP9538612.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008616775.1;locus_tag=NND05_13875;product=peptide deformylase;protein_id=MCP9538612.1;transl_table=11 JANDXE010000039.1 Genbank gene 12860 13273 . - . ID=gene-NND05_13880;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NND05_13880 JANDXE010000039.1 Protein Homology CDS 12860 13273 . - 0 ID=cds-MCP9538613.1;Parent=gene-NND05_13880;Dbxref=NCBI_GP:MCP9538613.1;Name=MCP9538613.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846875.1;locus_tag=NND05_13880;product=Holliday junction resolvase RuvX;protein_id=MCP9538613.1;transl_table=11 JANDXE010000039.1 Genbank gene 13315 13797 . - . ID=gene-NND05_13885;Name=NND05_13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13885 JANDXE010000039.1 Protein Homology CDS 13315 13797 . - 0 ID=cds-MCP9538614.1;Parent=gene-NND05_13885;Dbxref=NCBI_GP:MCP9538614.1;Name=MCP9538614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846876.1;locus_tag=NND05_13885;product=SPOR domain-containing protein;protein_id=MCP9538614.1;transl_table=11 JANDXE010000039.1 Genbank gene 14179 14391 . + . ID=gene-NND05_13890;Name=NND05_13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13890 JANDXE010000039.1 Protein Homology CDS 14179 14391 . + 0 ID=cds-MCP9538615.1;Parent=gene-NND05_13890;Dbxref=NCBI_GP:MCP9538615.1;Name=MCP9538615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846877.1;locus_tag=NND05_13890;product=YtxH domain-containing protein;protein_id=MCP9538615.1;transl_table=11 JANDXE010000039.1 Genbank gene 14457 14807 . + . ID=gene-NND05_13895;Name=NND05_13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13895 JANDXE010000039.1 Protein Homology CDS 14457 14807 . + 0 ID=cds-MCP9538616.1;Parent=gene-NND05_13895;Dbxref=NCBI_GP:MCP9538616.1;Name=MCP9538616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341907.1;locus_tag=NND05_13895;product=phage holin family protein;protein_id=MCP9538616.1;transl_table=11 JANDXE010000039.1 Genbank gene 14823 15116 . + . ID=gene-NND05_13900;Name=NND05_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13900 JANDXE010000039.1 Protein Homology CDS 14823 15116 . + 0 ID=cds-MCP9538617.1;Parent=gene-NND05_13900;Dbxref=NCBI_GP:MCP9538617.1;Name=MCP9538617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348497.1;locus_tag=NND05_13900;product=hypothetical protein;protein_id=MCP9538617.1;transl_table=11 JANDXE010000039.1 Genbank gene 15405 16184 . - . ID=gene-NND05_13905;Name=NND05_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13905 JANDXE010000039.1 Protein Homology CDS 15405 16184 . - 0 ID=cds-MCP9538618.1;Parent=gene-NND05_13905;Dbxref=NCBI_GP:MCP9538618.1;Name=MCP9538618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009162787.1;locus_tag=NND05_13905;product=MBL fold metallo-hydrolase;protein_id=MCP9538618.1;transl_table=11 JANDXE010000039.1 Genbank gene 16244 17299 . - . ID=gene-NND05_13910;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NND05_13910 JANDXE010000039.1 Protein Homology CDS 16244 17299 . - 0 ID=cds-MCP9538619.1;Parent=gene-NND05_13910;Dbxref=NCBI_GP:MCP9538619.1;Name=MCP9538619.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004363490.1;locus_tag=NND05_13910;product=UDP-N-acetylmuramate dehydrogenase;protein_id=MCP9538619.1;transl_table=11 JANDXE010000039.1 Genbank gene 17332 18189 . - . ID=gene-NND05_13915;Name=NND05_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13915 JANDXE010000039.1 Protein Homology CDS 17332 18189 . - 0 ID=cds-MCP9538620.1;Parent=gene-NND05_13915;Dbxref=NCBI_GP:MCP9538620.1;Name=MCP9538620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846882.1;locus_tag=NND05_13915;product=DUF4348 domain-containing protein;protein_id=MCP9538620.1;transl_table=11 JANDXE010000039.1 Genbank gene 18371 19411 . + . ID=gene-NND05_13920;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=NND05_13920 JANDXE010000039.1 Protein Homology CDS 18371 19411 . + 0 ID=cds-MCP9538621.1;Parent=gene-NND05_13920;Dbxref=NCBI_GP:MCP9538621.1;Name=MCP9538621.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846883.1;locus_tag=NND05_13920;product=phenylalanine--tRNA ligase subunit alpha;protein_id=MCP9538621.1;transl_table=11 JANDXE010000039.1 Genbank gene 19431 19982 . + . ID=gene-NND05_13925;Name=NND05_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13925 JANDXE010000039.1 Protein Homology CDS 19431 19982 . + 0 ID=cds-MCP9538622.1;Parent=gene-NND05_13925;Dbxref=NCBI_GP:MCP9538622.1;Name=MCP9538622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846884.1;locus_tag=NND05_13925;product=DUF3332 domain-containing protein;protein_id=MCP9538622.1;transl_table=11 JANDXE010000039.1 Genbank gene 20125 22542 . + . ID=gene-NND05_13930;Name=NND05_13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13930 JANDXE010000039.1 Protein Homology CDS 20125 22542 . + 0 ID=cds-MCP9538623.1;Parent=gene-NND05_13930;Dbxref=NCBI_GP:MCP9538623.1;Name=MCP9538623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346726.1;locus_tag=NND05_13930;product=TonB-dependent receptor;protein_id=MCP9538623.1;transl_table=11 JANDXE010000039.1 Genbank gene 23266 23634 . + . ID=gene-NND05_13935;Name=NND05_13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13935 JANDXE010000039.1 GeneMarkS-2+ CDS 23266 23634 . + 0 ID=cds-MCP9538624.1;Parent=gene-NND05_13935;Dbxref=NCBI_GP:MCP9538624.1;Name=MCP9538624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13935;product=hypothetical protein;protein_id=MCP9538624.1;transl_table=11 JANDXE010000039.1 Genbank gene 23660 24121 . + . ID=gene-NND05_13940;Name=NND05_13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13940 JANDXE010000039.1 GeneMarkS-2+ CDS 23660 24121 . + 0 ID=cds-MCP9538625.1;Parent=gene-NND05_13940;Dbxref=NCBI_GP:MCP9538625.1;Name=MCP9538625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13940;product=hypothetical protein;protein_id=MCP9538625.1;transl_table=11 JANDXE010000039.1 Genbank gene 24569 24775 . - . ID=gene-NND05_13945;Name=NND05_13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13945 JANDXE010000039.1 GeneMarkS-2+ CDS 24569 24775 . - 0 ID=cds-MCP9538626.1;Parent=gene-NND05_13945;Dbxref=NCBI_GP:MCP9538626.1;Name=MCP9538626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_13945;product=hypothetical protein;protein_id=MCP9538626.1;transl_table=11 JANDXE010000039.1 Genbank gene 24982 25728 . - . ID=gene-NND05_13950;Name=NND05_13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13950 JANDXE010000039.1 Protein Homology CDS 24982 25728 . - 0 ID=cds-MCP9538627.1;Parent=gene-NND05_13950;Dbxref=NCBI_GP:MCP9538627.1;Name=MCP9538627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900057.1;locus_tag=NND05_13950;product=hypothetical protein;protein_id=MCP9538627.1;transl_table=11 JANDXE010000039.1 Genbank gene 25764 26714 . - . ID=gene-NND05_13955;Name=NND05_13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13955 JANDXE010000039.1 Protein Homology CDS 25764 26714 . - 0 ID=cds-MCP9538628.1;Parent=gene-NND05_13955;Dbxref=NCBI_GP:MCP9538628.1;Name=MCP9538628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656563.1;locus_tag=NND05_13955;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MCP9538628.1;transl_table=11 JANDXE010000039.1 Genbank gene 26711 27121 . - . ID=gene-NND05_13960;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=NND05_13960 JANDXE010000039.1 Protein Homology CDS 26711 27121 . - 0 ID=cds-MCP9538629.1;Parent=gene-NND05_13960;Dbxref=NCBI_GP:MCP9538629.1;Name=MCP9538629.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628605.1;locus_tag=NND05_13960;product=plasmid mobilization relaxosome protein MobC;protein_id=MCP9538629.1;transl_table=11 JANDXE010000039.1 Genbank gene 27306 27788 . - . ID=gene-NND05_13965;Name=NND05_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13965 JANDXE010000039.1 Protein Homology CDS 27306 27788 . - 0 ID=cds-MCP9538630.1;Parent=gene-NND05_13965;Dbxref=NCBI_GP:MCP9538630.1;Name=MCP9538630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_13965;product=DUF3408 domain-containing protein;protein_id=MCP9538630.1;transl_table=11 ##sequence-region JANDXE010000040.1 1 25938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000040.1 Genbank region 1 25938 . + . ID=JANDXE010000040.1:1..25938;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000040.1 Genbank gene 1 1628 . - . ID=gene-NND05_13970;Name=NND05_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13970;partial=true;start_range=.,1 JANDXE010000040.1 Protein Homology CDS 1 1628 . - 0 ID=cds-MCP9538631.1;Parent=gene-NND05_13970;Dbxref=NCBI_GP:MCP9538631.1;Name=MCP9538631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_13970;partial=true;product=HAMP domain-containing histidine kinase;protein_id=MCP9538631.1;start_range=.,1;transl_table=11 JANDXE010000040.1 Genbank gene 2161 3033 . - . ID=gene-NND05_13975;Name=NND05_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13975 JANDXE010000040.1 Protein Homology CDS 2161 3033 . - 0 ID=cds-MCP9538632.1;Parent=gene-NND05_13975;Dbxref=NCBI_GP:MCP9538632.1;Name=MCP9538632.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012693.2;locus_tag=NND05_13975;product=protein phosphatase 2C domain-containing protein;protein_id=MCP9538632.1;transl_table=11 JANDXE010000040.1 Genbank gene 3044 4828 . - . ID=gene-NND05_13980;Name=NND05_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13980 JANDXE010000040.1 Protein Homology CDS 3044 4828 . - 0 ID=cds-MCP9538633.1;Parent=gene-NND05_13980;Dbxref=NCBI_GP:MCP9538633.1;Name=MCP9538633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=NND05_13980;product=WG repeat-containing protein;protein_id=MCP9538633.1;transl_table=11 JANDXE010000040.1 Genbank gene 4842 6311 . - . ID=gene-NND05_13985;Name=NND05_13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_13985 JANDXE010000040.1 Protein Homology CDS 4842 6311 . - 0 ID=cds-MCP9538634.1;Parent=gene-NND05_13985;Dbxref=NCBI_GP:MCP9538634.1;Name=MCP9538634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=NND05_13985;product=serine/threonine protein kinase;protein_id=MCP9538634.1;transl_table=11 JANDXE010000040.1 Genbank pseudogene 6767 7903 . + . ID=gene-NND05_13990;Name=NND05_13990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13990;pseudo=true JANDXE010000040.1 Protein Homology CDS 6767 7903 . + 0 ID=cds-NND05_13990;Parent=gene-NND05_13990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611159.1;locus_tag=NND05_13990;product=IS1380 family transposase;pseudo=true;transl_table=11 JANDXE010000040.1 Genbank pseudogene 7901 8149 . - . ID=gene-NND05_13995;Name=NND05_13995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_13995;pseudo=true JANDXE010000040.1 Protein Homology CDS 7901 8149 . - 0 ID=cds-NND05_13995;Parent=gene-NND05_13995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124279.1;locus_tag=NND05_13995;product=DUF1016 N-terminal domain-containing protein;pseudo=true;transl_table=11 JANDXE010000040.1 Genbank gene 8327 9475 . - . ID=gene-NND05_14000;Name=NND05_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14000 JANDXE010000040.1 Protein Homology CDS 8327 9475 . - 0 ID=cds-MCP9538635.1;Parent=gene-NND05_14000;Dbxref=NCBI_GP:MCP9538635.1;Name=MCP9538635.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=NND05_14000;product=transposase;protein_id=MCP9538635.1;transl_table=11 JANDXE010000040.1 Genbank gene 9673 10167 . - . ID=gene-NND05_14005;Name=NND05_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14005 JANDXE010000040.1 Protein Homology CDS 9673 10167 . - 0 ID=cds-MCP9538636.1;Parent=gene-NND05_14005;Dbxref=NCBI_GP:MCP9538636.1;Name=MCP9538636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015512804.1;locus_tag=NND05_14005;product=HD domain-containing protein;protein_id=MCP9538636.1;transl_table=11 JANDXE010000040.1 Genbank gene 10205 10945 . - . ID=gene-NND05_14010;Name=NND05_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14010 JANDXE010000040.1 Protein Homology CDS 10205 10945 . - 0 ID=cds-MCP9538637.1;Parent=gene-NND05_14010;Dbxref=NCBI_GP:MCP9538637.1;Name=MCP9538637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005816203.1;locus_tag=NND05_14010;product=class I SAM-dependent methyltransferase;protein_id=MCP9538637.1;transl_table=11 JANDXE010000040.1 Genbank gene 10926 11795 . - . ID=gene-NND05_14015;Name=NND05_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14015 JANDXE010000040.1 Protein Homology CDS 10926 11795 . - 0 ID=cds-MCP9538638.1;Parent=gene-NND05_14015;Dbxref=NCBI_GP:MCP9538638.1;Name=MCP9538638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328890.1;locus_tag=NND05_14015;product=nucleotidyltransferase domain-containing protein;protein_id=MCP9538638.1;transl_table=11 JANDXE010000040.1 Genbank gene 11818 12072 . - . ID=gene-NND05_14020;Name=NND05_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14020 JANDXE010000040.1 Protein Homology CDS 11818 12072 . - 0 ID=cds-MCP9538639.1;Parent=gene-NND05_14020;Dbxref=NCBI_GP:MCP9538639.1;Name=MCP9538639.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897429.1;locus_tag=NND05_14020;product=DNA cytosine methyltransferase;protein_id=MCP9538639.1;transl_table=11 JANDXE010000040.1 Genbank gene 12065 12250 . - . ID=gene-NND05_14025;Name=NND05_14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14025 JANDXE010000040.1 Protein Homology CDS 12065 12250 . - 0 ID=cds-MCP9538640.1;Parent=gene-NND05_14025;Dbxref=NCBI_GP:MCP9538640.1;Name=MCP9538640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897431.1;locus_tag=NND05_14025;product=sucrose-6-phosphate hydrolase;protein_id=MCP9538640.1;transl_table=11 JANDXE010000040.1 Genbank gene 12784 13518 . - . ID=gene-NND05_14030;Name=erm;gbkey=Gene;gene=erm;gene_biotype=protein_coding;locus_tag=NND05_14030 JANDXE010000040.1 Protein Homology CDS 12784 13518 . - 0 ID=cds-MCP9538641.1;Parent=gene-NND05_14030;Dbxref=NCBI_GP:MCP9538641.1;Name=MCP9538641.1;gbkey=CDS;gene=erm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014387027.1;locus_tag=NND05_14030;product=23S ribosomal RNA methyltransferase Erm;protein_id=MCP9538641.1;transl_table=11 JANDXE010000040.1 Genbank gene 13659 14948 . + . ID=gene-NND05_14035;Name=NND05_14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14035 JANDXE010000040.1 Protein Homology CDS 13659 14948 . + 0 ID=cds-MCP9538642.1;Parent=gene-NND05_14035;Dbxref=NCBI_GP:MCP9538642.1;Name=MCP9538642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611159.1;locus_tag=NND05_14035;product=IS1380-like element IS612 family transposase;protein_id=MCP9538642.1;transl_table=11 JANDXE010000040.1 Genbank gene 15161 15892 . - . ID=gene-NND05_14040;Name=NND05_14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14040 JANDXE010000040.1 Protein Homology CDS 15161 15892 . - 0 ID=cds-MCP9538643.1;Parent=gene-NND05_14040;Dbxref=NCBI_GP:MCP9538643.1;Name=MCP9538643.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312234.1;locus_tag=NND05_14040;product=UpxY family transcription antiterminator;protein_id=MCP9538643.1;transl_table=11 JANDXE010000040.1 Genbank gene 16573 22365 . - . ID=gene-NND05_14045;Name=NND05_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14045 JANDXE010000040.1 Protein Homology CDS 16573 22365 . - 0 ID=cds-MCP9538644.1;Parent=gene-NND05_14045;Dbxref=NCBI_GP:MCP9538644.1;Name=MCP9538644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008017115.1;locus_tag=NND05_14045;product=DNA methylase;protein_id=MCP9538644.1;transl_table=11 JANDXE010000040.1 Genbank gene 22352 22801 . - . ID=gene-NND05_14050;Name=NND05_14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14050 JANDXE010000040.1 Protein Homology CDS 22352 22801 . - 0 ID=cds-MCP9538645.1;Parent=gene-NND05_14050;Dbxref=NCBI_GP:MCP9538645.1;Name=MCP9538645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002561000.1;locus_tag=NND05_14050;product=DUF1896 domain-containing protein;protein_id=MCP9538645.1;transl_table=11 JANDXE010000040.1 Genbank gene 22981 25137 . - . ID=gene-NND05_14055;Name=NND05_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14055 JANDXE010000040.1 Protein Homology CDS 22981 25137 . - 0 ID=cds-MCP9538646.1;Parent=gene-NND05_14055;Dbxref=NCBI_GP:MCP9538646.1;Name=MCP9538646.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007566594.1;locus_tag=NND05_14055;product=DNA topoisomerase;protein_id=MCP9538646.1;transl_table=11 JANDXE010000040.1 Genbank gene 25236 25938 . - . ID=gene-NND05_14060;Name=NND05_14060;end_range=25938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14060;partial=true JANDXE010000040.1 GeneMarkS-2+ CDS 25236 25938 . - 1 ID=cds-MCP9538647.1;Parent=gene-NND05_14060;Dbxref=NCBI_GP:MCP9538647.1;Name=MCP9538647.1;end_range=25938,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14060;partial=true;product=DUF3945 domain-containing protein;protein_id=MCP9538647.1;transl_table=11 ##sequence-region JANDXE010000003.1 1 217104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000003.1 Genbank region 1 217104 . + . ID=JANDXE010000003.1:1..217104;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000003.1 Genbank gene 1 284 . - . ID=gene-NND05_02225;Name=NND05_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02225;partial=true;start_range=.,1 JANDXE010000003.1 GeneMarkS-2+ CDS 1 284 . - 0 ID=cds-MCP9536384.1;Parent=gene-NND05_02225;Dbxref=NCBI_GP:MCP9536384.1;Name=MCP9536384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02225;partial=true;product=hypothetical protein;protein_id=MCP9536384.1;start_range=.,1;transl_table=11 JANDXE010000003.1 Genbank gene 493 696 . - . ID=gene-NND05_02230;Name=NND05_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02230 JANDXE010000003.1 GeneMarkS-2+ CDS 493 696 . - 0 ID=cds-MCP9536385.1;Parent=gene-NND05_02230;Dbxref=NCBI_GP:MCP9536385.1;Name=MCP9536385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02230;product=hypothetical protein;protein_id=MCP9536385.1;transl_table=11 JANDXE010000003.1 Genbank gene 908 1171 . - . ID=gene-NND05_02235;Name=NND05_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02235 JANDXE010000003.1 GeneMarkS-2+ CDS 908 1171 . - 0 ID=cds-MCP9536386.1;Parent=gene-NND05_02235;Dbxref=NCBI_GP:MCP9536386.1;Name=MCP9536386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02235;product=hypothetical protein;protein_id=MCP9536386.1;transl_table=11 JANDXE010000003.1 Genbank gene 1430 1777 . - . ID=gene-NND05_02240;Name=NND05_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02240 JANDXE010000003.1 Protein Homology CDS 1430 1777 . - 0 ID=cds-MCP9536387.1;Parent=gene-NND05_02240;Dbxref=NCBI_GP:MCP9536387.1;Name=MCP9536387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=NND05_02240;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9536387.1;transl_table=11 JANDXE010000003.1 Genbank gene 1753 2055 . - . ID=gene-NND05_02245;Name=NND05_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02245 JANDXE010000003.1 GeneMarkS-2+ CDS 1753 2055 . - 0 ID=cds-MCP9536388.1;Parent=gene-NND05_02245;Dbxref=NCBI_GP:MCP9536388.1;Name=MCP9536388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02245;product=hypothetical protein;protein_id=MCP9536388.1;transl_table=11 JANDXE010000003.1 Genbank gene 2106 4022 . - . ID=gene-NND05_02250;Name=NND05_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02250 JANDXE010000003.1 Protein Homology CDS 2106 4022 . - 0 ID=cds-MCP9536389.1;Parent=gene-NND05_02250;Dbxref=NCBI_GP:MCP9536389.1;Name=MCP9536389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848652.1;locus_tag=NND05_02250;product=polysaccharide biosynthesis protein;protein_id=MCP9536389.1;transl_table=11 JANDXE010000003.1 Genbank gene 4139 6136 . - . ID=gene-NND05_02255;Name=NND05_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02255 JANDXE010000003.1 GeneMarkS-2+ CDS 4139 6136 . - 0 ID=cds-MCP9536390.1;Parent=gene-NND05_02255;Dbxref=NCBI_GP:MCP9536390.1;Name=MCP9536390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02255;product=hypothetical protein;protein_id=MCP9536390.1;transl_table=11 JANDXE010000003.1 Genbank gene 6769 7311 . + . ID=gene-NND05_02260;Name=NND05_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02260 JANDXE010000003.1 Protein Homology CDS 6769 7311 . + 0 ID=cds-MCP9536391.1;Parent=gene-NND05_02260;Dbxref=NCBI_GP:MCP9536391.1;Name=MCP9536391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265742.1;locus_tag=NND05_02260;product=hypothetical protein;protein_id=MCP9536391.1;transl_table=11 JANDXE010000003.1 Genbank gene 7424 9112 . + . ID=gene-NND05_02265;Name=sulP;gbkey=Gene;gene=sulP;gene_biotype=protein_coding;locus_tag=NND05_02265 JANDXE010000003.1 Protein Homology CDS 7424 9112 . + 0 ID=cds-MCP9536392.1;Parent=gene-NND05_02265;Dbxref=NCBI_GP:MCP9536392.1;Name=MCP9536392.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;gene=sulP;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283708.1;locus_tag=NND05_02265;product=sulfate permease;protein_id=MCP9536392.1;transl_table=11 JANDXE010000003.1 Genbank gene 9288 10010 . - . ID=gene-NND05_02270;Name=NND05_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02270 JANDXE010000003.1 Protein Homology CDS 9288 10010 . - 0 ID=cds-MCP9536393.1;Parent=gene-NND05_02270;Dbxref=NCBI_GP:MCP9536393.1;Name=MCP9536393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1;locus_tag=NND05_02270;product=amino acid ABC transporter ATP-binding protein;protein_id=MCP9536393.1;transl_table=11 JANDXE010000003.1 Genbank gene 10123 11574 . - . ID=gene-NND05_02275;Name=NND05_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02275 JANDXE010000003.1 Protein Homology CDS 10123 11574 . - 0 ID=cds-MCP9536394.1;Parent=gene-NND05_02275;Dbxref=NCBI_GP:MCP9536394.1;Name=MCP9536394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283192.1;locus_tag=NND05_02275;product=ABC transporter substrate-binding protein/permease;protein_id=MCP9536394.1;transl_table=11 JANDXE010000003.1 Genbank gene 11814 13022 . - . ID=gene-NND05_02280;Name=NND05_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02280 JANDXE010000003.1 Protein Homology CDS 11814 13022 . - 0 ID=cds-MCP9536395.1;Parent=gene-NND05_02280;Dbxref=NCBI_GP:MCP9536395.1;Name=MCP9536395.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375011.1;locus_tag=NND05_02280;product=L-serine ammonia-lyase;protein_id=MCP9536395.1;transl_table=11 JANDXE010000003.1 Genbank gene 13078 13845 . - . ID=gene-NND05_02285;Name=NND05_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02285 JANDXE010000003.1 Protein Homology CDS 13078 13845 . - 0 ID=cds-MCP9536396.1;Parent=gene-NND05_02285;Dbxref=NCBI_GP:MCP9536396.1;Name=MCP9536396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967809.1;locus_tag=NND05_02285;product=peptidylprolyl isomerase;protein_id=MCP9536396.1;transl_table=11 JANDXE010000003.1 Genbank gene 14037 14960 . + . ID=gene-NND05_02290;Name=NND05_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02290 JANDXE010000003.1 Protein Homology CDS 14037 14960 . + 0 ID=cds-MCP9536397.1;Parent=gene-NND05_02290;Dbxref=NCBI_GP:MCP9536397.1;Name=MCP9536397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846660.1;locus_tag=NND05_02290;product=hypothetical protein;protein_id=MCP9536397.1;transl_table=11 JANDXE010000003.1 Genbank gene 15173 16288 . - . ID=gene-NND05_02295;Name=NND05_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02295 JANDXE010000003.1 Protein Homology CDS 15173 16288 . - 0 ID=cds-MCP9536398.1;Parent=gene-NND05_02295;Dbxref=NCBI_GP:MCP9536398.1;Name=MCP9536398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283367.1;locus_tag=NND05_02295;product=UDP-N-acetyl glucosamine 2-epimerase;protein_id=MCP9536398.1;transl_table=11 JANDXE010000003.1 Genbank gene 16299 17252 . - . ID=gene-NND05_02300;Name=NND05_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02300 JANDXE010000003.1 Protein Homology CDS 16299 17252 . - 0 ID=cds-MCP9536399.1;Parent=gene-NND05_02300;Dbxref=NCBI_GP:MCP9536399.1;Name=MCP9536399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380044.1;locus_tag=NND05_02300;product=SPFH/Band 7/PHB domain protein;protein_id=MCP9536399.1;transl_table=11 JANDXE010000003.1 Genbank gene 17271 17723 . - . ID=gene-NND05_02305;Name=NND05_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02305 JANDXE010000003.1 Protein Homology CDS 17271 17723 . - 0 ID=cds-MCP9536400.1;Parent=gene-NND05_02305;Dbxref=NCBI_GP:MCP9536400.1;Name=MCP9536400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412015.1;locus_tag=NND05_02305;product=NfeD family protein;protein_id=MCP9536400.1;transl_table=11 JANDXE010000003.1 Genbank gene 17728 18627 . - . ID=gene-NND05_02310;Name=NND05_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02310 JANDXE010000003.1 Protein Homology CDS 17728 18627 . - 0 ID=cds-MCP9536401.1;Parent=gene-NND05_02310;Dbxref=NCBI_GP:MCP9536401.1;Name=MCP9536401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463380.1;locus_tag=NND05_02310;product=M48 family metallopeptidase;protein_id=MCP9536401.1;transl_table=11 JANDXE010000003.1 Genbank gene 19076 20719 . - . ID=gene-NND05_02315;Name=NND05_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02315 JANDXE010000003.1 Protein Homology CDS 19076 20719 . - 0 ID=cds-MCP9536402.1;Parent=gene-NND05_02315;Dbxref=NCBI_GP:MCP9536402.1;Name=MCP9536402.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347483.1;locus_tag=NND05_02315;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCP9536402.1;transl_table=11 JANDXE010000003.1 Genbank gene 20997 22508 . - . ID=gene-NND05_02320;Name=NND05_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02320 JANDXE010000003.1 Protein Homology CDS 20997 22508 . - 0 ID=cds-MCP9536403.1;Parent=gene-NND05_02320;Dbxref=NCBI_GP:MCP9536403.1;Name=MCP9536403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910511.1;locus_tag=NND05_02320;product=family 10 glycosylhydrolase;protein_id=MCP9536403.1;transl_table=11 JANDXE010000003.1 Genbank gene 22550 23200 . - . ID=gene-NND05_02325;Name=NND05_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02325 JANDXE010000003.1 Protein Homology CDS 22550 23200 . - 0 ID=cds-MCP9536404.1;Parent=gene-NND05_02325;Dbxref=NCBI_GP:MCP9536404.1;Name=MCP9536404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848667.1;locus_tag=NND05_02325;product=trimeric intracellular cation channel family protein;protein_id=MCP9536404.1;transl_table=11 JANDXE010000003.1 Genbank gene 23221 24495 . - . ID=gene-NND05_02330;Name=NND05_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02330 JANDXE010000003.1 Protein Homology CDS 23221 24495 . - 0 ID=cds-MCP9536405.1;Parent=gene-NND05_02330;Dbxref=NCBI_GP:MCP9536405.1;Name=MCP9536405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848668.1;locus_tag=NND05_02330;product=replication-associated recombination protein A;protein_id=MCP9536405.1;transl_table=11 JANDXE010000003.1 Genbank gene 24655 25464 . + . ID=gene-NND05_02335;Name=NND05_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02335 JANDXE010000003.1 Protein Homology CDS 24655 25464 . + 0 ID=cds-MCP9536406.1;Parent=gene-NND05_02335;Dbxref=NCBI_GP:MCP9536406.1;Name=MCP9536406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368315.1;locus_tag=NND05_02335;product=hypothetical protein;protein_id=MCP9536406.1;transl_table=11 JANDXE010000003.1 Genbank gene 25497 25718 . + . ID=gene-NND05_02340;Name=NND05_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02340 JANDXE010000003.1 Protein Homology CDS 25497 25718 . + 0 ID=cds-MCP9536407.1;Parent=gene-NND05_02340;Dbxref=NCBI_GP:MCP9536407.1;Name=MCP9536407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848670.1;locus_tag=NND05_02340;product=hypothetical protein;protein_id=MCP9536407.1;transl_table=11 JANDXE010000003.1 Genbank gene 25746 25973 . + . ID=gene-NND05_02345;Name=NND05_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02345 JANDXE010000003.1 GeneMarkS-2+ CDS 25746 25973 . + 0 ID=cds-MCP9536408.1;Parent=gene-NND05_02345;Dbxref=NCBI_GP:MCP9536408.1;Name=MCP9536408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02345;product=hypothetical protein;protein_id=MCP9536408.1;transl_table=11 JANDXE010000003.1 Genbank gene 26111 26181 . + . ID=gene-NND05_02350;Name=NND05_02350;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_02350 JANDXE010000003.1 tRNAscan-SE tRNA 26111 26181 . + . ID=rna-NND05_02350;Parent=gene-NND05_02350;anticodon=(pos:26143..26145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02350;product=tRNA-Cys JANDXE010000003.1 tRNAscan-SE exon 26111 26181 . + . ID=exon-NND05_02350-1;Parent=rna-NND05_02350;anticodon=(pos:26143..26145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02350;product=tRNA-Cys JANDXE010000003.1 Genbank gene 26234 26304 . + . ID=gene-NND05_02355;Name=NND05_02355;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_02355 JANDXE010000003.1 tRNAscan-SE tRNA 26234 26304 . + . ID=rna-NND05_02355;Parent=gene-NND05_02355;anticodon=(pos:26266..26268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02355;product=tRNA-Cys JANDXE010000003.1 tRNAscan-SE exon 26234 26304 . + . ID=exon-NND05_02355-1;Parent=rna-NND05_02355;anticodon=(pos:26266..26268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02355;product=tRNA-Cys JANDXE010000003.1 Genbank gene 26716 27045 . + . ID=gene-NND05_02360;Name=NND05_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02360 JANDXE010000003.1 Protein Homology CDS 26716 27045 . + 0 ID=cds-MCP9536409.1;Parent=gene-NND05_02360;Dbxref=NCBI_GP:MCP9536409.1;Name=MCP9536409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017345.2;locus_tag=NND05_02360;product=WxcM-like domain-containing protein;protein_id=MCP9536409.1;transl_table=11 JANDXE010000003.1 Genbank gene 27051 28343 . + . ID=gene-NND05_02365;Name=NND05_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02365 JANDXE010000003.1 Protein Homology CDS 27051 28343 . + 0 ID=cds-MCP9536410.1;Parent=gene-NND05_02365;Dbxref=NCBI_GP:MCP9536410.1;Name=MCP9536410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=NND05_02365;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=MCP9536410.1;transl_table=11 JANDXE010000003.1 Genbank gene 28316 29059 . - . ID=gene-NND05_02370;Name=NND05_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02370 JANDXE010000003.1 Protein Homology CDS 28316 29059 . - 0 ID=cds-MCP9536411.1;Parent=gene-NND05_02370;Dbxref=NCBI_GP:MCP9536411.1;Name=MCP9536411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370269.1;locus_tag=NND05_02370;product=hypothetical protein;protein_id=MCP9536411.1;transl_table=11 JANDXE010000003.1 Genbank gene 29316 30377 . - . ID=gene-NND05_02375;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=NND05_02375 JANDXE010000003.1 Protein Homology CDS 29316 30377 . - 0 ID=cds-MCP9536412.1;Parent=gene-NND05_02375;Dbxref=NCBI_GP:MCP9536412.1;Name=MCP9536412.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065727.1;locus_tag=NND05_02375;product=3-isopropylmalate dehydrogenase;protein_id=MCP9536412.1;transl_table=11 JANDXE010000003.1 Genbank gene 30525 32123 . - . ID=gene-NND05_02380;Name=NND05_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02380 JANDXE010000003.1 Protein Homology CDS 30525 32123 . - 0 ID=cds-MCP9536413.1;Parent=gene-NND05_02380;Dbxref=NCBI_GP:MCP9536413.1;Name=MCP9536413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846818.1;locus_tag=NND05_02380;product=2-isopropylmalate synthase;protein_id=MCP9536413.1;transl_table=11 JANDXE010000003.1 Genbank gene 32134 32724 . - . ID=gene-NND05_02385;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NND05_02385 JANDXE010000003.1 Protein Homology CDS 32134 32724 . - 0 ID=cds-MCP9536414.1;Parent=gene-NND05_02385;Dbxref=NCBI_GP:MCP9536414.1;Name=MCP9536414.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343106.1;locus_tag=NND05_02385;product=3-isopropylmalate dehydratase small subunit;protein_id=MCP9536414.1;transl_table=11 JANDXE010000003.1 Genbank gene 32758 34152 . - . ID=gene-NND05_02390;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NND05_02390 JANDXE010000003.1 Protein Homology CDS 32758 34152 . - 0 ID=cds-MCP9536415.1;Parent=gene-NND05_02390;Dbxref=NCBI_GP:MCP9536415.1;Name=MCP9536415.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846820.1;locus_tag=NND05_02390;product=3-isopropylmalate dehydratase large subunit;protein_id=MCP9536415.1;transl_table=11 JANDXE010000003.1 Genbank gene 34190 35692 . - . ID=gene-NND05_02395;Name=NND05_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02395 JANDXE010000003.1 Protein Homology CDS 34190 35692 . - 0 ID=cds-MCP9536416.1;Parent=gene-NND05_02395;Dbxref=NCBI_GP:MCP9536416.1;Name=MCP9536416.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846821.1;locus_tag=NND05_02395;product=2-isopropylmalate synthase;protein_id=MCP9536416.1;transl_table=11 JANDXE010000003.1 Genbank gene 36161 37687 . - . ID=gene-NND05_02400;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=NND05_02400 JANDXE010000003.1 Protein Homology CDS 36161 37687 . - 0 ID=cds-MCP9536417.1;Parent=gene-NND05_02400;Dbxref=NCBI_GP:MCP9536417.1;Name=MCP9536417.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=dnaB;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846822.1;locus_tag=NND05_02400;product=replicative DNA helicase;protein_id=MCP9536417.1;transl_table=11 JANDXE010000003.1 Genbank gene 37668 40313 . - . ID=gene-NND05_02405;Name=NND05_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02405 JANDXE010000003.1 GeneMarkS-2+ CDS 37668 40313 . - 0 ID=cds-MCP9536418.1;Parent=gene-NND05_02405;Dbxref=NCBI_GP:MCP9536418.1;Name=MCP9536418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02405;product=hypothetical protein;protein_id=MCP9536418.1;transl_table=11 JANDXE010000003.1 Genbank gene 40326 41243 . - . ID=gene-NND05_02410;Name=NND05_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02410 JANDXE010000003.1 Protein Homology CDS 40326 41243 . - 0 ID=cds-MCP9536419.1;Parent=gene-NND05_02410;Dbxref=NCBI_GP:MCP9536419.1;Name=MCP9536419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282970.1;locus_tag=NND05_02410;product=ABC transporter substrate-binding protein;protein_id=MCP9536419.1;transl_table=11 JANDXE010000003.1 Genbank gene 41317 42498 . - . ID=gene-NND05_02415;Name=NND05_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02415 JANDXE010000003.1 Protein Homology CDS 41317 42498 . - 0 ID=cds-MCP9536420.1;Parent=gene-NND05_02415;Dbxref=NCBI_GP:MCP9536420.1;Name=MCP9536420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346057.1;locus_tag=NND05_02415;product=class I SAM-dependent rRNA methyltransferase;protein_id=MCP9536420.1;transl_table=11 JANDXE010000003.1 Genbank gene 42565 43176 . - . ID=gene-NND05_02420;Name=NND05_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02420 JANDXE010000003.1 Protein Homology CDS 42565 43176 . - 0 ID=cds-MCP9536421.1;Parent=gene-NND05_02420;Dbxref=NCBI_GP:MCP9536421.1;Name=MCP9536421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846826.1;locus_tag=NND05_02420;product=3'-5' exonuclease domain-containing protein 2;protein_id=MCP9536421.1;transl_table=11 JANDXE010000003.1 Genbank gene 43291 45921 . + . ID=gene-NND05_02425;Name=NND05_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02425 JANDXE010000003.1 Protein Homology CDS 43291 45921 . + 0 ID=cds-MCP9536422.1;Parent=gene-NND05_02425;Dbxref=NCBI_GP:MCP9536422.1;Name=MCP9536422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846827.1;locus_tag=NND05_02425;product=DNA translocase FtsK;protein_id=MCP9536422.1;transl_table=11 JANDXE010000003.1 Genbank gene 46117 46716 . + . ID=gene-NND05_02430;Name=NND05_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02430 JANDXE010000003.1 Protein Homology CDS 46117 46716 . + 0 ID=cds-MCP9536423.1;Parent=gene-NND05_02430;Dbxref=NCBI_GP:MCP9536423.1;Name=MCP9536423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846828.1;locus_tag=NND05_02430;product=hypothetical protein;protein_id=MCP9536423.1;transl_table=11 JANDXE010000003.1 Genbank gene 46854 47942 . + . ID=gene-NND05_02435;Name=NND05_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02435 JANDXE010000003.1 Protein Homology CDS 46854 47942 . + 0 ID=cds-MCP9536424.1;Parent=gene-NND05_02435;Dbxref=NCBI_GP:MCP9536424.1;Name=MCP9536424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897836.1;locus_tag=NND05_02435;product=aminoglycoside phosphotransferase family protein;protein_id=MCP9536424.1;transl_table=11 JANDXE010000003.1 Genbank gene 47957 51859 . + . ID=gene-NND05_02440;Name=NND05_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02440 JANDXE010000003.1 Protein Homology CDS 47957 51859 . + 0 ID=cds-MCP9536425.1;Parent=gene-NND05_02440;Dbxref=NCBI_GP:MCP9536425.1;Name=MCP9536425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005638726.1;locus_tag=NND05_02440;product=DUF5110 domain-containing protein;protein_id=MCP9536425.1;transl_table=11 JANDXE010000003.1 Genbank gene 52003 52437 . + . ID=gene-NND05_02445;Name=NND05_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02445 JANDXE010000003.1 Protein Homology CDS 52003 52437 . + 0 ID=cds-MCP9536426.1;Parent=gene-NND05_02445;Dbxref=NCBI_GP:MCP9536426.1;Name=MCP9536426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370205.1;locus_tag=NND05_02445;product=transcriptional repressor;protein_id=MCP9536426.1;transl_table=11 JANDXE010000003.1 Genbank gene 52528 53088 . + . ID=gene-NND05_02450;Name=NND05_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02450 JANDXE010000003.1 Protein Homology CDS 52528 53088 . + 0 ID=cds-MCP9536427.1;Parent=gene-NND05_02450;Dbxref=NCBI_GP:MCP9536427.1;Name=MCP9536427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464624.1;locus_tag=NND05_02450;product=NADH peroxidase;protein_id=MCP9536427.1;transl_table=11 JANDXE010000003.1 Genbank gene 53297 55066 . + . ID=gene-NND05_02455;Name=NND05_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02455 JANDXE010000003.1 Protein Homology CDS 53297 55066 . + 0 ID=cds-MCP9536428.1;Parent=gene-NND05_02455;Dbxref=NCBI_GP:MCP9536428.1;Name=MCP9536428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008997293.1;locus_tag=NND05_02455;product=ATP-binding protein;protein_id=MCP9536428.1;transl_table=11 JANDXE010000003.1 Genbank pseudogene 55679 55984 . + . ID=gene-NND05_02460;Name=NND05_02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_02460;pseudo=true JANDXE010000003.1 Protein Homology CDS 55679 55984 . + 0 ID=cds-NND05_02460;Parent=gene-NND05_02460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847482.1;locus_tag=NND05_02460;product=DNA-binding protein;pseudo=true;transl_table=11 JANDXE010000003.1 Genbank gene 56349 57611 . + . ID=gene-NND05_02465;Name=NND05_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02465 JANDXE010000003.1 Protein Homology CDS 56349 57611 . + 0 ID=cds-MCP9536429.1;Parent=gene-NND05_02465;Dbxref=NCBI_GP:MCP9536429.1;Name=MCP9536429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966373.1;locus_tag=NND05_02465;product=DUF3575 domain-containing protein;protein_id=MCP9536429.1;transl_table=11 JANDXE010000003.1 Genbank gene 57598 58557 . + . ID=gene-NND05_02470;Name=NND05_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02470 JANDXE010000003.1 Protein Homology CDS 57598 58557 . + 0 ID=cds-MCP9536430.1;Parent=gene-NND05_02470;Dbxref=NCBI_GP:MCP9536430.1;Name=MCP9536430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014776479.1;locus_tag=NND05_02470;product=DUF5119 domain-containing protein;protein_id=MCP9536430.1;transl_table=11 JANDXE010000003.1 Genbank gene 58751 59884 . + . ID=gene-NND05_02475;Name=NND05_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02475 JANDXE010000003.1 Protein Homology CDS 58751 59884 . + 0 ID=cds-MCP9536431.1;Parent=gene-NND05_02475;Dbxref=NCBI_GP:MCP9536431.1;Name=MCP9536431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008771408.1;locus_tag=NND05_02475;product=fimbrillin family protein;protein_id=MCP9536431.1;transl_table=11 JANDXE010000003.1 Genbank gene 60013 61158 . - . ID=gene-NND05_02480;Name=NND05_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02480 JANDXE010000003.1 Protein Homology CDS 60013 61158 . - 0 ID=cds-MCP9536432.1;Parent=gene-NND05_02480;Dbxref=NCBI_GP:MCP9536432.1;Name=MCP9536432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848426.1;locus_tag=NND05_02480;product=AAA family ATPase;protein_id=MCP9536432.1;transl_table=11 JANDXE010000003.1 Genbank gene 61683 62957 . - . ID=gene-NND05_02485;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=NND05_02485 JANDXE010000003.1 Protein Homology CDS 61683 62957 . - 0 ID=cds-MCP9536433.1;Parent=gene-NND05_02485;Dbxref=NCBI_GP:MCP9536433.1;Name=MCP9536433.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004381994.1;locus_tag=NND05_02485;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=MCP9536433.1;transl_table=11 JANDXE010000003.1 Genbank gene 62976 63599 . - . ID=gene-NND05_02490;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=NND05_02490 JANDXE010000003.1 Protein Homology CDS 62976 63599 . - 0 ID=cds-MCP9536434.1;Parent=gene-NND05_02490;Dbxref=NCBI_GP:MCP9536434.1;Name=MCP9536434.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235713.1;locus_tag=NND05_02490;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=MCP9536434.1;transl_table=11 JANDXE010000003.1 Genbank gene 63601 64227 . - . ID=gene-NND05_02495;Name=NND05_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02495 JANDXE010000003.1 Protein Homology CDS 63601 64227 . - 0 ID=cds-MCP9536435.1;Parent=gene-NND05_02495;Dbxref=NCBI_GP:MCP9536435.1;Name=MCP9536435.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848995.1;locus_tag=NND05_02495;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=MCP9536435.1;transl_table=11 JANDXE010000003.1 Genbank gene 64240 64842 . - . ID=gene-NND05_02500;Name=NND05_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02500 JANDXE010000003.1 Protein Homology CDS 64240 64842 . - 0 ID=cds-MCP9536436.1;Parent=gene-NND05_02500;Dbxref=NCBI_GP:MCP9536436.1;Name=MCP9536436.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848994.1;locus_tag=NND05_02500;product=FMN-binding protein;protein_id=MCP9536436.1;transl_table=11 JANDXE010000003.1 Genbank gene 64861 66018 . - . ID=gene-NND05_02505;Name=NND05_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02505 JANDXE010000003.1 Protein Homology CDS 64861 66018 . - 0 ID=cds-MCP9536437.1;Parent=gene-NND05_02505;Dbxref=NCBI_GP:MCP9536437.1;Name=MCP9536437.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282309.1;locus_tag=NND05_02505;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=MCP9536437.1;transl_table=11 JANDXE010000003.1 Genbank gene 66046 67401 . - . ID=gene-NND05_02510;Name=NND05_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02510 JANDXE010000003.1 Protein Homology CDS 66046 67401 . - 0 ID=cds-MCP9536438.1;Parent=gene-NND05_02510;Dbxref=NCBI_GP:MCP9536438.1;Name=MCP9536438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967324.1;locus_tag=NND05_02510;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=MCP9536438.1;transl_table=11 JANDXE010000003.1 Genbank gene 67704 71987 . + . ID=gene-NND05_02515;Name=NND05_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02515 JANDXE010000003.1 Protein Homology CDS 67704 71987 . + 0 ID=cds-MCP9536439.1;Parent=gene-NND05_02515;Dbxref=NCBI_GP:MCP9536439.1;Name=MCP9536439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410729.1;locus_tag=NND05_02515;product=translocation/assembly module TamB;protein_id=MCP9536439.1;transl_table=11 JANDXE010000003.1 Genbank gene 72391 72479 . + . ID=gene-NND05_02520;Name=NND05_02520;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_02520 JANDXE010000003.1 tRNAscan-SE tRNA 72391 72479 . + . ID=rna-NND05_02520;Parent=gene-NND05_02520;anticodon=(pos:72425..72427);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02520;product=tRNA-Ser JANDXE010000003.1 tRNAscan-SE exon 72391 72479 . + . ID=exon-NND05_02520-1;Parent=rna-NND05_02520;anticodon=(pos:72425..72427);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_02520;product=tRNA-Ser JANDXE010000003.1 Genbank gene 72569 73501 . - . ID=gene-NND05_02525;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NND05_02525 JANDXE010000003.1 Protein Homology CDS 72569 73501 . - 0 ID=cds-MCP9536440.1;Parent=gene-NND05_02525;Dbxref=NCBI_GP:MCP9536440.1;Name=MCP9536440.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967545.1;locus_tag=NND05_02525;product=thioredoxin-disulfide reductase;protein_id=MCP9536440.1;transl_table=11 JANDXE010000003.1 Genbank gene 73555 74139 . - . ID=gene-NND05_02530;Name=NND05_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02530 JANDXE010000003.1 Protein Homology CDS 73555 74139 . - 0 ID=cds-MCP9536441.1;Parent=gene-NND05_02530;Dbxref=NCBI_GP:MCP9536441.1;Name=MCP9536441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968579.1;locus_tag=NND05_02530;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=MCP9536441.1;transl_table=11 JANDXE010000003.1 Genbank gene 74289 74654 . - . ID=gene-NND05_02535;Name=NND05_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02535 JANDXE010000003.1 Protein Homology CDS 74289 74654 . - 0 ID=cds-MCP9536442.1;Parent=gene-NND05_02535;Dbxref=NCBI_GP:MCP9536442.1;Name=MCP9536442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345488.1;locus_tag=NND05_02535;product=6-carboxytetrahydropterin synthase;protein_id=MCP9536442.1;transl_table=11 JANDXE010000003.1 Genbank gene 74845 75945 . + . ID=gene-NND05_02540;Name=NND05_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02540 JANDXE010000003.1 Protein Homology CDS 74845 75945 . + 0 ID=cds-MCP9536443.1;Parent=gene-NND05_02540;Dbxref=NCBI_GP:MCP9536443.1;Name=MCP9536443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846703.1;locus_tag=NND05_02540;product=AAA family ATPase;protein_id=MCP9536443.1;transl_table=11 JANDXE010000003.1 Genbank gene 75986 76729 . + . ID=gene-NND05_02545;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=NND05_02545 JANDXE010000003.1 Protein Homology CDS 75986 76729 . + 0 ID=cds-MCP9536444.1;Parent=gene-NND05_02545;Dbxref=NCBI_GP:MCP9536444.1;Name=MCP9536444.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370468.1;locus_tag=NND05_02545;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=MCP9536444.1;transl_table=11 JANDXE010000003.1 Genbank gene 76961 78328 . + . ID=gene-NND05_02550;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NND05_02550 JANDXE010000003.1 Protein Homology CDS 76961 78328 . + 0 ID=cds-MCP9536445.1;Parent=gene-NND05_02550;Dbxref=NCBI_GP:MCP9536445.1;Name=MCP9536445.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346060.1;locus_tag=NND05_02550;product=tRNA lysidine(34) synthetase TilS;protein_id=MCP9536445.1;transl_table=11 JANDXE010000003.1 Genbank gene 78416 80134 . + . ID=gene-NND05_02555;Name=NND05_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02555 JANDXE010000003.1 Protein Homology CDS 78416 80134 . + 0 ID=cds-MCP9536446.1;Parent=gene-NND05_02555;Dbxref=NCBI_GP:MCP9536446.1;Name=MCP9536446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411890.1;locus_tag=NND05_02555;product=glycosyl hydrolase family 25;protein_id=MCP9536446.1;transl_table=11 JANDXE010000003.1 Genbank gene 80248 81120 . + . ID=gene-NND05_02560;Name=NND05_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02560 JANDXE010000003.1 Protein Homology CDS 80248 81120 . + 0 ID=cds-MCP9536447.1;Parent=gene-NND05_02560;Dbxref=NCBI_GP:MCP9536447.1;Name=MCP9536447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235426.1;locus_tag=NND05_02560;product=RNA polymerase sigma factor RpoD/SigA;protein_id=MCP9536447.1;transl_table=11 JANDXE010000003.1 Genbank gene 81245 83350 . + . ID=gene-NND05_02565;Name=NND05_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02565 JANDXE010000003.1 Protein Homology CDS 81245 83350 . + 0 ID=cds-MCP9536448.1;Parent=gene-NND05_02565;Dbxref=NCBI_GP:MCP9536448.1;Name=MCP9536448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039501.1;locus_tag=NND05_02565;product=DUF5686 family protein;protein_id=MCP9536448.1;transl_table=11 JANDXE010000003.1 Genbank gene 83402 86668 . + . ID=gene-NND05_02570;Name=NND05_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02570 JANDXE010000003.1 Protein Homology CDS 83402 86668 . + 0 ID=cds-MCP9536449.1;Parent=gene-NND05_02570;Dbxref=NCBI_GP:MCP9536449.1;Name=MCP9536449.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846724.1;locus_tag=NND05_02570;product=UvrD-helicase domain-containing protein;protein_id=MCP9536449.1;transl_table=11 JANDXE010000003.1 Genbank gene 86710 89646 . + . ID=gene-NND05_02575;Name=NND05_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02575 JANDXE010000003.1 Protein Homology CDS 86710 89646 . + 0 ID=cds-MCP9536450.1;Parent=gene-NND05_02575;Dbxref=NCBI_GP:MCP9536450.1;Name=MCP9536450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342819.1;locus_tag=NND05_02575;product=PD-(D/E)XK nuclease family protein;protein_id=MCP9536450.1;transl_table=11 JANDXE010000003.1 Genbank gene 89817 90434 . + . ID=gene-NND05_02580;Name=NND05_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02580 JANDXE010000003.1 Protein Homology CDS 89817 90434 . + 0 ID=cds-MCP9536451.1;Parent=gene-NND05_02580;Dbxref=NCBI_GP:MCP9536451.1;Name=MCP9536451.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=NND05_02580;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9536451.1;transl_table=11 JANDXE010000003.1 Genbank gene 90565 90984 . - . ID=gene-NND05_02585;Name=NND05_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02585 JANDXE010000003.1 Protein Homology CDS 90565 90984 . - 0 ID=cds-MCP9536452.1;Parent=gene-NND05_02585;Dbxref=NCBI_GP:MCP9536452.1;Name=MCP9536452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065379.1;locus_tag=NND05_02585;product=helix-turn-helix domain-containing protein;protein_id=MCP9536452.1;transl_table=11 JANDXE010000003.1 Genbank gene 91170 93077 . + . ID=gene-NND05_02590;Name=NND05_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02590 JANDXE010000003.1 Protein Homology CDS 91170 93077 . + 0 ID=cds-MCP9536453.1;Parent=gene-NND05_02590;Dbxref=NCBI_GP:MCP9536453.1;Name=MCP9536453.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005826386.1;locus_tag=NND05_02590;product=sulfatase-like hydrolase/transferase;protein_id=MCP9536453.1;transl_table=11 JANDXE010000003.1 Genbank gene 93141 93830 . + . ID=gene-NND05_02595;Name=NND05_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02595 JANDXE010000003.1 Protein Homology CDS 93141 93830 . + 0 ID=cds-MCP9536454.1;Parent=gene-NND05_02595;Dbxref=NCBI_GP:MCP9536454.1;Name=MCP9536454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846729.1;locus_tag=NND05_02595;product=phosphatase PAP2 family protein;protein_id=MCP9536454.1;transl_table=11 JANDXE010000003.1 Genbank gene 93876 94268 . + . ID=gene-NND05_02600;Name=NND05_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02600 JANDXE010000003.1 GeneMarkS-2+ CDS 93876 94268 . + 0 ID=cds-MCP9536455.1;Parent=gene-NND05_02600;Dbxref=NCBI_GP:MCP9536455.1;Name=MCP9536455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02600;product=hypothetical protein;protein_id=MCP9536455.1;transl_table=11 JANDXE010000003.1 Genbank gene 94528 96246 . + . ID=gene-NND05_02605;Name=NND05_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02605 JANDXE010000003.1 Protein Homology CDS 94528 96246 . + 0 ID=cds-MCP9536456.1;Parent=gene-NND05_02605;Dbxref=NCBI_GP:MCP9536456.1;Name=MCP9536456.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846731.1;locus_tag=NND05_02605;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=MCP9536456.1;transl_table=11 JANDXE010000003.1 Genbank gene 96258 96902 . + . ID=gene-NND05_02610;Name=NND05_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02610 JANDXE010000003.1 Protein Homology CDS 96258 96902 . + 0 ID=cds-MCP9536457.1;Parent=gene-NND05_02610;Dbxref=NCBI_GP:MCP9536457.1;Name=MCP9536457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547475.1;locus_tag=NND05_02610;product=DedA family protein;protein_id=MCP9536457.1;transl_table=11 JANDXE010000003.1 Genbank gene 96994 98064 . - . ID=gene-NND05_02615;Name=NND05_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02615 JANDXE010000003.1 Protein Homology CDS 96994 98064 . - 0 ID=cds-MCP9536458.1;Parent=gene-NND05_02615;Dbxref=NCBI_GP:MCP9536458.1;Name=MCP9536458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370121.1;locus_tag=NND05_02615;product=mannose-1-phosphate guanylyltransferase;protein_id=MCP9536458.1;transl_table=11 JANDXE010000003.1 Genbank gene 98207 99694 . - . ID=gene-NND05_02620;Name=NND05_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02620 JANDXE010000003.1 Protein Homology CDS 98207 99694 . - 0 ID=cds-MCP9536459.1;Parent=gene-NND05_02620;Dbxref=NCBI_GP:MCP9536459.1;Name=MCP9536459.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849012.1;locus_tag=NND05_02620;product=FGGY family carbohydrate kinase;protein_id=MCP9536459.1;transl_table=11 JANDXE010000003.1 Genbank gene 100144 100488 . - . ID=gene-NND05_02625;Name=NND05_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02625 JANDXE010000003.1 Protein Homology CDS 100144 100488 . - 0 ID=cds-MCP9536460.1;Parent=gene-NND05_02625;Dbxref=NCBI_GP:MCP9536460.1;Name=MCP9536460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849011.1;locus_tag=NND05_02625;product=hypothetical protein;protein_id=MCP9536460.1;transl_table=11 JANDXE010000003.1 Genbank gene 100646 100960 . - . ID=gene-NND05_02630;Name=NND05_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02630 JANDXE010000003.1 Protein Homology CDS 100646 100960 . - 0 ID=cds-MCP9536461.1;Parent=gene-NND05_02630;Dbxref=NCBI_GP:MCP9536461.1;Name=MCP9536461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967125.1;locus_tag=NND05_02630;product=winged helix-turn-helix domain-containing protein;protein_id=MCP9536461.1;transl_table=11 JANDXE010000003.1 Genbank gene 101142 102899 . - . ID=gene-NND05_02635;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=NND05_02635 JANDXE010000003.1 Protein Homology CDS 101142 102899 . - 0 ID=cds-MCP9536462.1;Parent=gene-NND05_02635;Dbxref=NCBI_GP:MCP9536462.1;Name=MCP9536462.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013672160.1;locus_tag=NND05_02635;product=aspartate--tRNA ligase;protein_id=MCP9536462.1;transl_table=11 JANDXE010000003.1 Genbank gene 103016 103519 . - . ID=gene-NND05_02640;Name=NND05_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02640 JANDXE010000003.1 Protein Homology CDS 103016 103519 . - 0 ID=cds-MCP9536463.1;Parent=gene-NND05_02640;Dbxref=NCBI_GP:MCP9536463.1;Name=MCP9536463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282330.1;locus_tag=NND05_02640;product=hypothetical protein;protein_id=MCP9536463.1;transl_table=11 JANDXE010000003.1 Genbank gene 103548 103979 . - . ID=gene-NND05_02645;Name=NND05_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02645 JANDXE010000003.1 GeneMarkS-2+ CDS 103548 103979 . - 0 ID=cds-MCP9536464.1;Parent=gene-NND05_02645;Dbxref=NCBI_GP:MCP9536464.1;Name=MCP9536464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02645;product=hypothetical protein;protein_id=MCP9536464.1;transl_table=11 JANDXE010000003.1 Genbank gene 104034 104579 . - . ID=gene-NND05_02650;Name=NND05_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02650 JANDXE010000003.1 Protein Homology CDS 104034 104579 . - 0 ID=cds-MCP9536465.1;Parent=gene-NND05_02650;Dbxref=NCBI_GP:MCP9536465.1;Name=MCP9536465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464757.1;locus_tag=NND05_02650;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9536465.1;transl_table=11 JANDXE010000003.1 Genbank gene 104640 106193 . - . ID=gene-NND05_02655;Name=NND05_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02655 JANDXE010000003.1 Protein Homology CDS 104640 106193 . - 0 ID=cds-MCP9536466.1;Parent=gene-NND05_02655;Dbxref=NCBI_GP:MCP9536466.1;Name=MCP9536466.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341940.1;locus_tag=NND05_02655;product=L%2CD-transpeptidase family protein;protein_id=MCP9536466.1;transl_table=11 JANDXE010000003.1 Genbank gene 106227 106544 . - . ID=gene-NND05_02660;Name=NND05_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02660 JANDXE010000003.1 Protein Homology CDS 106227 106544 . - 0 ID=cds-MCP9536467.1;Parent=gene-NND05_02660;Dbxref=NCBI_GP:MCP9536467.1;Name=MCP9536467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183.1;locus_tag=NND05_02660;product=T9SS type A sorting domain-containing protein;protein_id=MCP9536467.1;transl_table=11 JANDXE010000003.1 Genbank gene 106657 107694 . - . ID=gene-NND05_02665;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=NND05_02665 JANDXE010000003.1 Protein Homology CDS 106657 107694 . - 0 ID=cds-MCP9536468.1;Parent=gene-NND05_02665;Dbxref=NCBI_GP:MCP9536468.1;Name=MCP9536468.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282846.1;locus_tag=NND05_02665;product=UDP-glucose 4-epimerase GalE;protein_id=MCP9536468.1;transl_table=11 JANDXE010000003.1 Genbank gene 107997 109985 . + . ID=gene-NND05_02670;Name=NND05_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02670 JANDXE010000003.1 Protein Homology CDS 107997 109985 . + 0 ID=cds-MCP9536469.1;Parent=gene-NND05_02670;Dbxref=NCBI_GP:MCP9536469.1;Name=MCP9536469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346777.1;locus_tag=NND05_02670;product=fructose-1%2C6-bisphosphatase;protein_id=MCP9536469.1;transl_table=11 JANDXE010000003.1 Genbank gene 110098 110994 . - . ID=gene-NND05_02675;Name=NND05_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02675 JANDXE010000003.1 Protein Homology CDS 110098 110994 . - 0 ID=cds-MCP9536470.1;Parent=gene-NND05_02675;Dbxref=NCBI_GP:MCP9536470.1;Name=MCP9536470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846749.1;locus_tag=NND05_02675;product=YitT family protein;protein_id=MCP9536470.1;transl_table=11 JANDXE010000003.1 Genbank gene 111250 111876 . + . ID=gene-NND05_02680;Name=NND05_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02680 JANDXE010000003.1 GeneMarkS-2+ CDS 111250 111876 . + 0 ID=cds-MCP9536471.1;Parent=gene-NND05_02680;Dbxref=NCBI_GP:MCP9536471.1;Name=MCP9536471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02680;product=phosphoribosyltransferase;protein_id=MCP9536471.1;transl_table=11 JANDXE010000003.1 Genbank gene 111883 114300 . - . ID=gene-NND05_02685;Name=NND05_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02685 JANDXE010000003.1 Protein Homology CDS 111883 114300 . - 0 ID=cds-MCP9536472.1;Parent=gene-NND05_02685;Dbxref=NCBI_GP:MCP9536472.1;Name=MCP9536472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846712.1;locus_tag=NND05_02685;product=TonB-dependent receptor;protein_id=MCP9536472.1;transl_table=11 JANDXE010000003.1 Genbank gene 114377 115306 . - . ID=gene-NND05_02690;Name=NND05_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02690 JANDXE010000003.1 Protein Homology CDS 114377 115306 . - 0 ID=cds-MCP9536473.1;Parent=gene-NND05_02690;Dbxref=NCBI_GP:MCP9536473.1;Name=MCP9536473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846713.1;locus_tag=NND05_02690;product=zinc ribbon domain-containing protein;protein_id=MCP9536473.1;transl_table=11 JANDXE010000003.1 Genbank gene 115340 117334 . - . ID=gene-NND05_02695;Name=NND05_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02695 JANDXE010000003.1 Protein Homology CDS 115340 117334 . - 0 ID=cds-MCP9536474.1;Parent=gene-NND05_02695;Dbxref=NCBI_GP:MCP9536474.1;Name=MCP9536474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846714.1;locus_tag=NND05_02695;product=U32 family peptidase;protein_id=MCP9536474.1;transl_table=11 JANDXE010000003.1 Genbank gene 117411 118328 . - . ID=gene-NND05_02700;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=NND05_02700 JANDXE010000003.1 Protein Homology CDS 117411 118328 . - 0 ID=cds-MCP9536475.1;Parent=gene-NND05_02700;Dbxref=NCBI_GP:MCP9536475.1;Name=MCP9536475.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370850.1;locus_tag=NND05_02700;product=homoserine O-succinyltransferase;protein_id=MCP9536475.1;transl_table=11 JANDXE010000003.1 Genbank gene 118592 118750 . - . ID=gene-NND05_02705;Name=NND05_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02705 JANDXE010000003.1 Protein Homology CDS 118592 118750 . - 0 ID=cds-MCP9536476.1;Parent=gene-NND05_02705;Dbxref=NCBI_GP:MCP9536476.1;Name=MCP9536476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366321.1;locus_tag=NND05_02705;product=DUF4295 domain-containing protein;protein_id=MCP9536476.1;transl_table=11 JANDXE010000003.1 Genbank gene 118796 118984 . - . ID=gene-NND05_02710;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NND05_02710 JANDXE010000003.1 Protein Homology CDS 118796 118984 . - 0 ID=cds-MCP9536477.1;Parent=gene-NND05_02710;Dbxref=NCBI_GP:MCP9536477.1;Name=MCP9536477.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012573149.1;locus_tag=NND05_02710;product=50S ribosomal protein L33;protein_id=MCP9536477.1;transl_table=11 JANDXE010000003.1 Genbank gene 118989 119252 . - . ID=gene-NND05_02715;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NND05_02715 JANDXE010000003.1 Protein Homology CDS 118989 119252 . - 0 ID=cds-MCP9536478.1;Parent=gene-NND05_02715;Dbxref=NCBI_GP:MCP9536478.1;Name=MCP9536478.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004379430.1;locus_tag=NND05_02715;product=50S ribosomal protein L28;protein_id=MCP9536478.1;transl_table=11 JANDXE010000003.1 Genbank gene 119400 119912 . - . ID=gene-NND05_02720;Name=NND05_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02720 JANDXE010000003.1 Protein Homology CDS 119400 119912 . - 0 ID=cds-MCP9536479.1;Parent=gene-NND05_02720;Dbxref=NCBI_GP:MCP9536479.1;Name=MCP9536479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849043.1;locus_tag=NND05_02720;product=CinA family protein;protein_id=MCP9536479.1;transl_table=11 JANDXE010000003.1 Genbank gene 119925 120959 . - . ID=gene-NND05_02725;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NND05_02725 JANDXE010000003.1 Protein Homology CDS 119925 120959 . - 0 ID=cds-MCP9536480.1;Parent=gene-NND05_02725;Dbxref=NCBI_GP:MCP9536480.1;Name=MCP9536480.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364152.1;locus_tag=NND05_02725;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MCP9536480.1;transl_table=11 JANDXE010000003.1 Genbank gene 120987 121847 . - . ID=gene-NND05_02730;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NND05_02730 JANDXE010000003.1 Protein Homology CDS 120987 121847 . - 0 ID=cds-MCP9536481.1;Parent=gene-NND05_02730;Dbxref=NCBI_GP:MCP9536481.1;Name=MCP9536481.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345850.1;locus_tag=NND05_02730;product=type I methionyl aminopeptidase;protein_id=MCP9536481.1;transl_table=11 JANDXE010000003.1 Genbank gene 121956 122576 . - . ID=gene-NND05_02735;Name=NND05_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02735 JANDXE010000003.1 Protein Homology CDS 121956 122576 . - 0 ID=cds-MCP9536482.1;Parent=gene-NND05_02735;Dbxref=NCBI_GP:MCP9536482.1;Name=MCP9536482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849040.1;locus_tag=NND05_02735;product=HAD family phosphatase;protein_id=MCP9536482.1;transl_table=11 JANDXE010000003.1 Genbank gene 122611 125394 . - . ID=gene-NND05_02740;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=NND05_02740 JANDXE010000003.1 Protein Homology CDS 122611 125394 . - 0 ID=cds-MCP9536483.1;Parent=gene-NND05_02740;Dbxref=NCBI_GP:MCP9536483.1;Name=MCP9536483.1;Ontology_term=GO:0009086,GO:0008705;gbkey=CDS;gene=metH;go_function=methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849039.1;locus_tag=NND05_02740;product=methionine synthase;protein_id=MCP9536483.1;transl_table=11 JANDXE010000003.1 Genbank gene 125399 125878 . - . ID=gene-NND05_02745;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NND05_02745 JANDXE010000003.1 Protein Homology CDS 125399 125878 . - 0 ID=cds-MCP9536484.1;Parent=gene-NND05_02745;Dbxref=NCBI_GP:MCP9536484.1;Name=MCP9536484.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359770.1;locus_tag=NND05_02745;product=SsrA-binding protein SmpB;protein_id=MCP9536484.1;transl_table=11 JANDXE010000003.1 Genbank gene 125897 126400 . - . ID=gene-NND05_02750;Name=NND05_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02750 JANDXE010000003.1 Protein Homology CDS 125897 126400 . - 0 ID=cds-MCP9536485.1;Parent=gene-NND05_02750;Dbxref=NCBI_GP:MCP9536485.1;Name=MCP9536485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008124051.1;locus_tag=NND05_02750;product=DMP19 family protein;protein_id=MCP9536485.1;transl_table=11 JANDXE010000003.1 Genbank gene 126643 127344 . + . ID=gene-NND05_02755;Name=NND05_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02755 JANDXE010000003.1 Protein Homology CDS 126643 127344 . + 0 ID=cds-MCP9536486.1;Parent=gene-NND05_02755;Dbxref=NCBI_GP:MCP9536486.1;Name=MCP9536486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005677723.1;locus_tag=NND05_02755;product=hypothetical protein;protein_id=MCP9536486.1;transl_table=11 JANDXE010000003.1 Genbank gene 127360 128373 . + . ID=gene-NND05_02760;Name=NND05_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02760 JANDXE010000003.1 Protein Homology CDS 127360 128373 . + 0 ID=cds-MCP9536487.1;Parent=gene-NND05_02760;Dbxref=NCBI_GP:MCP9536487.1;Name=MCP9536487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896973.1;locus_tag=NND05_02760;product=GGGtGRT protein;protein_id=MCP9536487.1;transl_table=11 JANDXE010000003.1 Genbank gene 129022 130512 . - . ID=gene-NND05_02765;Name=NND05_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02765 JANDXE010000003.1 GeneMarkS-2+ CDS 129022 130512 . - 0 ID=cds-MCP9536488.1;Parent=gene-NND05_02765;Dbxref=NCBI_GP:MCP9536488.1;Name=MCP9536488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02765;product=hypothetical protein;protein_id=MCP9536488.1;transl_table=11 JANDXE010000003.1 Genbank gene 130680 131207 . - . ID=gene-NND05_02770;Name=NND05_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02770 JANDXE010000003.1 Protein Homology CDS 130680 131207 . - 0 ID=cds-MCP9536489.1;Parent=gene-NND05_02770;Dbxref=NCBI_GP:MCP9536489.1;Name=MCP9536489.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010752.1;locus_tag=NND05_02770;product=30S ribosomal protein S16;protein_id=MCP9536489.1;transl_table=11 JANDXE010000003.1 Genbank gene 131364 131834 . - . ID=gene-NND05_02775;Name=NND05_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02775 JANDXE010000003.1 Protein Homology CDS 131364 131834 . - 0 ID=cds-MCP9536490.1;Parent=gene-NND05_02775;Dbxref=NCBI_GP:MCP9536490.1;Name=MCP9536490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025491.2;locus_tag=NND05_02775;product=DUF4293 domain-containing protein;protein_id=MCP9536490.1;transl_table=11 JANDXE010000003.1 Genbank gene 131852 132199 . - . ID=gene-NND05_02780;Name=NND05_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02780 JANDXE010000003.1 Protein Homology CDS 131852 132199 . - 0 ID=cds-MCP9536491.1;Parent=gene-NND05_02780;Dbxref=NCBI_GP:MCP9536491.1;Name=MCP9536491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370704.1;locus_tag=NND05_02780;product=DNA-directed RNA polymerase subunit omega;protein_id=MCP9536491.1;transl_table=11 JANDXE010000003.1 Genbank gene 132269 133135 . - . ID=gene-NND05_02785;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=NND05_02785 JANDXE010000003.1 Protein Homology CDS 132269 133135 . - 0 ID=cds-MCP9536492.1;Parent=gene-NND05_02785;Dbxref=NCBI_GP:MCP9536492.1;Name=MCP9536492.1;Ontology_term=GO:0065003,GO:0005198,GO:0019867;gbkey=CDS;gene=bamD;go_component=outer membrane|0019867||IEA;go_function=structural molecule activity|0005198||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849030.1;locus_tag=NND05_02785;product=outer membrane protein assembly factor BamD;protein_id=MCP9536492.1;transl_table=11 JANDXE010000003.1 Genbank gene 133273 135381 . + . ID=gene-NND05_02790;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NND05_02790 JANDXE010000003.1 Protein Homology CDS 133273 135381 . + 0 ID=cds-MCP9536493.1;Parent=gene-NND05_02790;Dbxref=NCBI_GP:MCP9536493.1;Name=MCP9536493.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849029.1;locus_tag=NND05_02790;product=excinuclease ABC subunit UvrB;protein_id=MCP9536493.1;transl_table=11 JANDXE010000003.1 Genbank gene 135467 136054 . - . ID=gene-NND05_02795;Name=NND05_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02795 JANDXE010000003.1 Protein Homology CDS 135467 136054 . - 0 ID=cds-MCP9536494.1;Parent=gene-NND05_02795;Dbxref=NCBI_GP:MCP9536494.1;Name=MCP9536494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372553.1;locus_tag=NND05_02795;product=YigZ family protein;protein_id=MCP9536494.1;transl_table=11 JANDXE010000003.1 Genbank gene 136054 137388 . - . ID=gene-NND05_02800;Name=NND05_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02800 JANDXE010000003.1 Protein Homology CDS 136054 137388 . - 0 ID=cds-MCP9536495.1;Parent=gene-NND05_02800;Dbxref=NCBI_GP:MCP9536495.1;Name=MCP9536495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010678.1;locus_tag=NND05_02800;product=DUF1015 domain-containing protein;protein_id=MCP9536495.1;transl_table=11 JANDXE010000003.1 Genbank gene 137494 138411 . - . ID=gene-NND05_02805;Name=NND05_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02805 JANDXE010000003.1 Protein Homology CDS 137494 138411 . - 0 ID=cds-MCP9536496.1;Parent=gene-NND05_02805;Dbxref=NCBI_GP:MCP9536496.1;Name=MCP9536496.1;Ontology_term=GO:0050661;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265059.1;locus_tag=NND05_02805;product=NAD(P)-binding domain-containing protein;protein_id=MCP9536496.1;transl_table=11 JANDXE010000003.1 Genbank gene 138423 139493 . - . ID=gene-NND05_02810;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=NND05_02810 JANDXE010000003.1 Protein Homology CDS 138423 139493 . - 0 ID=cds-MCP9536497.1;Parent=gene-NND05_02810;Dbxref=NCBI_GP:MCP9536497.1;Name=MCP9536497.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372550.1;locus_tag=NND05_02810;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=MCP9536497.1;transl_table=11 JANDXE010000003.1 Genbank gene 139796 141115 . - . ID=gene-NND05_02815;Name=NND05_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02815 JANDXE010000003.1 Protein Homology CDS 139796 141115 . - 0 ID=cds-MCP9536498.1;Parent=gene-NND05_02815;Dbxref=NCBI_GP:MCP9536498.1;Name=MCP9536498.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265704.1;locus_tag=NND05_02815;product=DEAD/DEAH box helicase;protein_id=MCP9536498.1;transl_table=11 JANDXE010000003.1 Genbank gene 141141 142412 . - . ID=gene-NND05_02820;Name=NND05_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02820 JANDXE010000003.1 Protein Homology CDS 141141 142412 . - 0 ID=cds-MCP9536499.1;Parent=gene-NND05_02820;Dbxref=NCBI_GP:MCP9536499.1;Name=MCP9536499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008125590.1;locus_tag=NND05_02820;product=hypothetical protein;protein_id=MCP9536499.1;transl_table=11 JANDXE010000003.1 Genbank gene 142399 143502 . - . ID=gene-NND05_02825;Name=NND05_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02825 JANDXE010000003.1 Protein Homology CDS 142399 143502 . - 0 ID=cds-MCP9536500.1;Parent=gene-NND05_02825;Dbxref=NCBI_GP:MCP9536500.1;Name=MCP9536500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849022.1;locus_tag=NND05_02825;product=DUF6057 family protein;protein_id=MCP9536500.1;transl_table=11 JANDXE010000003.1 Genbank gene 143513 145639 . - . ID=gene-NND05_02830;Name=NND05_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02830 JANDXE010000003.1 Protein Homology CDS 143513 145639 . - 0 ID=cds-MCP9536501.1;Parent=gene-NND05_02830;Dbxref=NCBI_GP:MCP9536501.1;Name=MCP9536501.1;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849021.1;locus_tag=NND05_02830;product=alpha amylase C-terminal domain-containing protein;protein_id=MCP9536501.1;transl_table=11 JANDXE010000003.1 Genbank gene 145682 146125 . - . ID=gene-NND05_02835;Name=NND05_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02835 JANDXE010000003.1 Protein Homology CDS 145682 146125 . - 0 ID=cds-MCP9536502.1;Parent=gene-NND05_02835;Dbxref=NCBI_GP:MCP9536502.1;Name=MCP9536502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342514.1;locus_tag=NND05_02835;product=YhcH/YjgK/YiaL family protein;protein_id=MCP9536502.1;transl_table=11 JANDXE010000003.1 Genbank gene 146246 147349 . - . ID=gene-NND05_02840;Name=NND05_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02840 JANDXE010000003.1 Protein Homology CDS 146246 147349 . - 0 ID=cds-MCP9536503.1;Parent=gene-NND05_02840;Dbxref=NCBI_GP:MCP9536503.1;Name=MCP9536503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174091.1;locus_tag=NND05_02840;product=phosphatidylinositol-4-phosphate 5-kinase;protein_id=MCP9536503.1;transl_table=11 JANDXE010000003.1 Genbank gene 147712 148422 . + . ID=gene-NND05_02845;Name=NND05_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02845 JANDXE010000003.1 Protein Homology CDS 147712 148422 . + 0 ID=cds-MCP9536504.1;Parent=gene-NND05_02845;Dbxref=NCBI_GP:MCP9536504.1;Name=MCP9536504.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_02845;product=LytTR family DNA-binding domain-containing protein;protein_id=MCP9536504.1;transl_table=11 JANDXE010000003.1 Genbank gene 148419 149072 . - . ID=gene-NND05_02850;Name=NND05_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02850 JANDXE010000003.1 Protein Homology CDS 148419 149072 . - 0 ID=cds-MCP9536505.1;Parent=gene-NND05_02850;Dbxref=NCBI_GP:MCP9536505.1;Name=MCP9536505.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909788.1;locus_tag=NND05_02850;product=HAD-IIIA family hydrolase;protein_id=MCP9536505.1;transl_table=11 JANDXE010000003.1 Genbank pseudogene 149259 149720 . - . ID=gene-NND05_02855;Name=NND05_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_02855;pseudo=true JANDXE010000003.1 Protein Homology CDS 149259 149720 . - 0 ID=cds-NND05_02855;Parent=gene-NND05_02855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012889.2;locus_tag=NND05_02855;product=hypothetical protein;pseudo=true;transl_table=11 JANDXE010000003.1 Genbank gene 150093 151145 . + . ID=gene-NND05_02860;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=NND05_02860 JANDXE010000003.1 Protein Homology CDS 150093 151145 . + 0 ID=cds-MCP9536506.1;Parent=gene-NND05_02860;Dbxref=NCBI_GP:MCP9536506.1;Name=MCP9536506.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896693.1;locus_tag=NND05_02860;product=endolytic transglycosylase MltG;protein_id=MCP9536506.1;transl_table=11 JANDXE010000003.1 Genbank gene 151270 151542 . + . ID=gene-NND05_02865;Name=NND05_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02865 JANDXE010000003.1 Protein Homology CDS 151270 151542 . + 0 ID=cds-MCP9536507.1;Parent=gene-NND05_02865;Dbxref=NCBI_GP:MCP9536507.1;Name=MCP9536507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008621773.1;locus_tag=NND05_02865;product=ACT domain-containing protein;protein_id=MCP9536507.1;transl_table=11 JANDXE010000003.1 Genbank gene 151574 152938 . + . ID=gene-NND05_02870;Name=NND05_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02870 JANDXE010000003.1 Protein Homology CDS 151574 152938 . + 0 ID=cds-MCP9536508.1;Parent=gene-NND05_02870;Dbxref=NCBI_GP:MCP9536508.1;Name=MCP9536508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008624114.1;locus_tag=NND05_02870;product=PFL family protein;protein_id=MCP9536508.1;transl_table=11 JANDXE010000003.1 Genbank gene 153173 154168 . - . ID=gene-NND05_02875;Name=NND05_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02875 JANDXE010000003.1 Protein Homology CDS 153173 154168 . - 0 ID=cds-MCP9536509.1;Parent=gene-NND05_02875;Dbxref=NCBI_GP:MCP9536509.1;Name=MCP9536509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848672.1;locus_tag=NND05_02875;product=rhamnogalacturonan acetylesterase;protein_id=MCP9536509.1;transl_table=11 JANDXE010000003.1 Genbank gene 154325 155689 . - . ID=gene-NND05_02880;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NND05_02880 JANDXE010000003.1 Protein Homology CDS 154325 155689 . - 0 ID=cds-MCP9536510.1;Parent=gene-NND05_02880;Dbxref=NCBI_GP:MCP9536510.1;Name=MCP9536510.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376388.1;locus_tag=NND05_02880;product=histidine--tRNA ligase;protein_id=MCP9536510.1;transl_table=11 JANDXE010000003.1 Genbank gene 155786 157060 . - . ID=gene-NND05_02885;Name=NND05_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02885 JANDXE010000003.1 Protein Homology CDS 155786 157060 . - 0 ID=cds-MCP9536511.1;Parent=gene-NND05_02885;Dbxref=NCBI_GP:MCP9536511.1;Name=MCP9536511.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340977.1;locus_tag=NND05_02885;product=adenylosuccinate synthase;protein_id=MCP9536511.1;transl_table=11 JANDXE010000003.1 Genbank gene 157085 157549 . - . ID=gene-NND05_02890;Name=NND05_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02890 JANDXE010000003.1 Protein Homology CDS 157085 157549 . - 0 ID=cds-MCP9536512.1;Parent=gene-NND05_02890;Dbxref=NCBI_GP:MCP9536512.1;Name=MCP9536512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848675.1;locus_tag=NND05_02890;product=transcriptional repressor;protein_id=MCP9536512.1;transl_table=11 JANDXE010000003.1 Genbank gene 157724 158386 . - . ID=gene-NND05_02895;Name=NND05_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02895 JANDXE010000003.1 Protein Homology CDS 157724 158386 . - 0 ID=cds-MCP9536513.1;Parent=gene-NND05_02895;Dbxref=NCBI_GP:MCP9536513.1;Name=MCP9536513.1;Ontology_term=GO:0000917,GO:0030428;gbkey=CDS;go_component=cell septum|0030428||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909798.1;locus_tag=NND05_02895;product=Maf family nucleotide pyrophosphatase;protein_id=MCP9536513.1;transl_table=11 JANDXE010000003.1 Genbank gene 158434 158952 . - . ID=gene-NND05_02900;Name=NND05_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02900 JANDXE010000003.1 Protein Homology CDS 158434 158952 . - 0 ID=cds-MCP9536514.1;Parent=gene-NND05_02900;Dbxref=NCBI_GP:MCP9536514.1;Name=MCP9536514.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346209.1;locus_tag=NND05_02900;product=HAD-IIIA family hydrolase;protein_id=MCP9536514.1;transl_table=11 JANDXE010000003.1 Genbank gene 158994 159770 . - . ID=gene-NND05_02905;Name=NND05_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02905 JANDXE010000003.1 Protein Homology CDS 158994 159770 . - 0 ID=cds-MCP9536515.1;Parent=gene-NND05_02905;Dbxref=NCBI_GP:MCP9536515.1;Name=MCP9536515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463278.1;locus_tag=NND05_02905;product=F420-dependent NADP oxidoreductase;protein_id=MCP9536515.1;transl_table=11 JANDXE010000003.1 Genbank gene 159941 160951 . + . ID=gene-NND05_02910;Name=NND05_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02910 JANDXE010000003.1 Protein Homology CDS 159941 160951 . + 0 ID=cds-MCP9536516.1;Parent=gene-NND05_02910;Dbxref=NCBI_GP:MCP9536516.1;Name=MCP9536516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848679.1;locus_tag=NND05_02910;product=GNAT family N-acetyltransferase;protein_id=MCP9536516.1;transl_table=11 JANDXE010000003.1 Genbank gene 160948 161568 . - . ID=gene-NND05_02915;Name=NND05_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02915 JANDXE010000003.1 Protein Homology CDS 160948 161568 . - 0 ID=cds-MCP9536517.1;Parent=gene-NND05_02915;Dbxref=NCBI_GP:MCP9536517.1;Name=MCP9536517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=NND05_02915;product=TetR/AcrR family transcriptional regulator;protein_id=MCP9536517.1;transl_table=11 JANDXE010000003.1 Genbank gene 161783 164071 . + . ID=gene-NND05_02920;Name=NND05_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02920 JANDXE010000003.1 Protein Homology CDS 161783 164071 . + 0 ID=cds-MCP9536518.1;Parent=gene-NND05_02920;Dbxref=NCBI_GP:MCP9536518.1;Name=MCP9536518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920328.1;locus_tag=NND05_02920;product=NADP-dependent malic enzyme;protein_id=MCP9536518.1;transl_table=11 JANDXE010000003.1 Genbank gene 164702 165019 . + . ID=gene-NND05_02925;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NND05_02925 JANDXE010000003.1 Protein Homology CDS 164702 165019 . + 0 ID=cds-MCP9536519.1;Parent=gene-NND05_02925;Dbxref=NCBI_GP:MCP9536519.1;Name=MCP9536519.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463568.1;locus_tag=NND05_02925;product=50S ribosomal protein L21;protein_id=MCP9536519.1;transl_table=11 JANDXE010000003.1 Genbank gene 165039 165329 . + . ID=gene-NND05_02930;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NND05_02930 JANDXE010000003.1 Protein Homology CDS 165039 165329 . + 0 ID=cds-MCP9536520.1;Parent=gene-NND05_02930;Dbxref=NCBI_GP:MCP9536520.1;Name=MCP9536520.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004381900.1;locus_tag=NND05_02930;product=50S ribosomal protein L27;protein_id=MCP9536520.1;transl_table=11 JANDXE010000003.1 Genbank gene 165542 166834 . + . ID=gene-NND05_02935;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=NND05_02935 JANDXE010000003.1 Protein Homology CDS 165542 166834 . + 0 ID=cds-MCP9536521.1;Parent=gene-NND05_02935;Dbxref=NCBI_GP:MCP9536521.1;Name=MCP9536521.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462331.1;locus_tag=NND05_02935;product=serine--tRNA ligase;protein_id=MCP9536521.1;transl_table=11 JANDXE010000003.1 Genbank gene 167027 169372 . + . ID=gene-NND05_02940;Name=NND05_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02940 JANDXE010000003.1 Protein Homology CDS 167027 169372 . + 0 ID=cds-MCP9536522.1;Parent=gene-NND05_02940;Dbxref=NCBI_GP:MCP9536522.1;Name=MCP9536522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967417.1;locus_tag=NND05_02940;product=bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;protein_id=MCP9536522.1;transl_table=11 JANDXE010000003.1 Genbank gene 169668 171044 . - . ID=gene-NND05_02945;Name=NND05_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02945 JANDXE010000003.1 Protein Homology CDS 169668 171044 . - 0 ID=cds-MCP9536523.1;Parent=gene-NND05_02945;Dbxref=NCBI_GP:MCP9536523.1;Name=MCP9536523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024957.2;locus_tag=NND05_02945;product=PorT family protein;protein_id=MCP9536523.1;transl_table=11 JANDXE010000003.1 Genbank gene 171037 171591 . - . ID=gene-NND05_02950;Name=NND05_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02950 JANDXE010000003.1 Protein Homology CDS 171037 171591 . - 0 ID=cds-MCP9536524.1;Parent=gene-NND05_02950;Dbxref=NCBI_GP:MCP9536524.1;Name=MCP9536524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064444.1;locus_tag=NND05_02950;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9536524.1;transl_table=11 JANDXE010000003.1 Genbank gene 171676 172590 . - . ID=gene-NND05_02955;Name=NND05_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02955 JANDXE010000003.1 Protein Homology CDS 171676 172590 . - 0 ID=cds-MCP9536525.1;Parent=gene-NND05_02955;Dbxref=NCBI_GP:MCP9536525.1;Name=MCP9536525.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014710154.1;locus_tag=NND05_02955;product=ribonuclease Z;protein_id=MCP9536525.1;transl_table=11 JANDXE010000003.1 Genbank gene 172617 173177 . - . ID=gene-NND05_02960;Name=NND05_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02960 JANDXE010000003.1 Protein Homology CDS 172617 173177 . - 0 ID=cds-MCP9536526.1;Parent=gene-NND05_02960;Dbxref=NCBI_GP:MCP9536526.1;Name=MCP9536526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848690.1;locus_tag=NND05_02960;product=lipocalin family protein;protein_id=MCP9536526.1;transl_table=11 JANDXE010000003.1 Genbank gene 173251 174222 . - . ID=gene-NND05_02965;Name=NND05_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02965 JANDXE010000003.1 Protein Homology CDS 173251 174222 . - 0 ID=cds-MCP9536527.1;Parent=gene-NND05_02965;Dbxref=NCBI_GP:MCP9536527.1;Name=MCP9536527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967520.1;locus_tag=NND05_02965;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=MCP9536527.1;transl_table=11 JANDXE010000003.1 Genbank gene 175025 176827 . + . ID=gene-NND05_02970;Name=NND05_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02970 JANDXE010000003.1 Protein Homology CDS 175025 176827 . + 0 ID=cds-MCP9536528.1;Parent=gene-NND05_02970;Dbxref=NCBI_GP:MCP9536528.1;Name=MCP9536528.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NND05_02970;product=tyrosine-type recombinase/integrase;protein_id=MCP9536528.1;transl_table=11 JANDXE010000003.1 Genbank gene 177114 177986 . - . ID=gene-NND05_02975;Name=NND05_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02975 JANDXE010000003.1 GeneMarkS-2+ CDS 177114 177986 . - 0 ID=cds-MCP9536529.1;Parent=gene-NND05_02975;Dbxref=NCBI_GP:MCP9536529.1;Name=MCP9536529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02975;product=hypothetical protein;protein_id=MCP9536529.1;transl_table=11 JANDXE010000003.1 Genbank gene 178161 178982 . - . ID=gene-NND05_02980;Name=NND05_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02980 JANDXE010000003.1 GeneMarkS-2+ CDS 178161 178982 . - 0 ID=cds-MCP9536530.1;Parent=gene-NND05_02980;Dbxref=NCBI_GP:MCP9536530.1;Name=MCP9536530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02980;product=hypothetical protein;protein_id=MCP9536530.1;transl_table=11 JANDXE010000003.1 Genbank gene 179064 179411 . - . ID=gene-NND05_02985;Name=NND05_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02985 JANDXE010000003.1 GeneMarkS-2+ CDS 179064 179411 . - 0 ID=cds-MCP9536531.1;Parent=gene-NND05_02985;Dbxref=NCBI_GP:MCP9536531.1;Name=MCP9536531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02985;product=hypothetical protein;protein_id=MCP9536531.1;transl_table=11 JANDXE010000003.1 Genbank gene 180446 180907 . - . ID=gene-NND05_02990;Name=NND05_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02990 JANDXE010000003.1 GeneMarkS-2+ CDS 180446 180907 . - 0 ID=cds-MCP9536532.1;Parent=gene-NND05_02990;Dbxref=NCBI_GP:MCP9536532.1;Name=MCP9536532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02990;product=hypothetical protein;protein_id=MCP9536532.1;transl_table=11 JANDXE010000003.1 Genbank gene 180956 181450 . - . ID=gene-NND05_02995;Name=NND05_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_02995 JANDXE010000003.1 GeneMarkS-2+ CDS 180956 181450 . - 0 ID=cds-MCP9536533.1;Parent=gene-NND05_02995;Dbxref=NCBI_GP:MCP9536533.1;Name=MCP9536533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_02995;product=hypothetical protein;protein_id=MCP9536533.1;transl_table=11 JANDXE010000003.1 Genbank gene 182117 182674 . - . ID=gene-NND05_03000;Name=NND05_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03000 JANDXE010000003.1 GeneMarkS-2+ CDS 182117 182674 . - 0 ID=cds-MCP9536534.1;Parent=gene-NND05_03000;Dbxref=NCBI_GP:MCP9536534.1;Name=MCP9536534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03000;product=hypothetical protein;protein_id=MCP9536534.1;transl_table=11 JANDXE010000003.1 Genbank gene 183251 183556 . - . ID=gene-NND05_03005;Name=NND05_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03005 JANDXE010000003.1 GeneMarkS-2+ CDS 183251 183556 . - 0 ID=cds-MCP9536535.1;Parent=gene-NND05_03005;Dbxref=NCBI_GP:MCP9536535.1;Name=MCP9536535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03005;product=hypothetical protein;protein_id=MCP9536535.1;transl_table=11 JANDXE010000003.1 Genbank gene 185066 185806 . - . ID=gene-NND05_03010;Name=NND05_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03010 JANDXE010000003.1 GeneMarkS-2+ CDS 185066 185806 . - 0 ID=cds-MCP9536536.1;Parent=gene-NND05_03010;Dbxref=NCBI_GP:MCP9536536.1;Name=MCP9536536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03010;product=hypothetical protein;protein_id=MCP9536536.1;transl_table=11 JANDXE010000003.1 Genbank gene 185909 186046 . - . ID=gene-NND05_03015;Name=NND05_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03015 JANDXE010000003.1 GeneMarkS-2+ CDS 185909 186046 . - 0 ID=cds-MCP9536537.1;Parent=gene-NND05_03015;Dbxref=NCBI_GP:MCP9536537.1;Name=MCP9536537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03015;product=hypothetical protein;protein_id=MCP9536537.1;transl_table=11 JANDXE010000003.1 Genbank gene 186360 186548 . - . ID=gene-NND05_03020;Name=NND05_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03020 JANDXE010000003.1 Protein Homology CDS 186360 186548 . - 0 ID=cds-MCP9536538.1;Parent=gene-NND05_03020;Dbxref=NCBI_GP:MCP9536538.1;Name=MCP9536538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647389.1;locus_tag=NND05_03020;product=MFS transporter;protein_id=MCP9536538.1;transl_table=11 JANDXE010000003.1 Genbank gene 186551 186745 . - . ID=gene-NND05_03025;Name=NND05_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03025 JANDXE010000003.1 GeneMarkS-2+ CDS 186551 186745 . - 0 ID=cds-MCP9536539.1;Parent=gene-NND05_03025;Dbxref=NCBI_GP:MCP9536539.1;Name=MCP9536539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03025;product=hypothetical protein;protein_id=MCP9536539.1;transl_table=11 JANDXE010000003.1 Genbank gene 188292 188489 . - . ID=gene-NND05_03030;Name=NND05_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03030 JANDXE010000003.1 GeneMarkS-2+ CDS 188292 188489 . - 0 ID=cds-MCP9536540.1;Parent=gene-NND05_03030;Dbxref=NCBI_GP:MCP9536540.1;Name=MCP9536540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03030;product=hypothetical protein;protein_id=MCP9536540.1;transl_table=11 JANDXE010000003.1 Genbank gene 190094 190339 . - . ID=gene-NND05_03035;Name=NND05_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03035 JANDXE010000003.1 GeneMarkS-2+ CDS 190094 190339 . - 0 ID=cds-MCP9536541.1;Parent=gene-NND05_03035;Dbxref=NCBI_GP:MCP9536541.1;Name=MCP9536541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03035;product=hypothetical protein;protein_id=MCP9536541.1;transl_table=11 JANDXE010000003.1 Genbank gene 190478 190681 . - . ID=gene-NND05_03040;Name=NND05_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03040 JANDXE010000003.1 GeneMarkS-2+ CDS 190478 190681 . - 0 ID=cds-MCP9536542.1;Parent=gene-NND05_03040;Dbxref=NCBI_GP:MCP9536542.1;Name=MCP9536542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03040;product=hypothetical protein;protein_id=MCP9536542.1;transl_table=11 JANDXE010000003.1 Genbank gene 191232 191576 . + . ID=gene-NND05_03045;Name=NND05_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03045 JANDXE010000003.1 GeneMarkS-2+ CDS 191232 191576 . + 0 ID=cds-MCP9536543.1;Parent=gene-NND05_03045;Dbxref=NCBI_GP:MCP9536543.1;Name=MCP9536543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03045;product=hypothetical protein;protein_id=MCP9536543.1;transl_table=11 JANDXE010000003.1 Genbank gene 191909 192154 . - . ID=gene-NND05_03050;Name=NND05_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03050 JANDXE010000003.1 GeneMarkS-2+ CDS 191909 192154 . - 0 ID=cds-MCP9536544.1;Parent=gene-NND05_03050;Dbxref=NCBI_GP:MCP9536544.1;Name=MCP9536544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03050;product=hypothetical protein;protein_id=MCP9536544.1;transl_table=11 JANDXE010000003.1 Genbank gene 192452 192673 . - . ID=gene-NND05_03055;Name=NND05_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03055 JANDXE010000003.1 GeneMarkS-2+ CDS 192452 192673 . - 0 ID=cds-MCP9536545.1;Parent=gene-NND05_03055;Dbxref=NCBI_GP:MCP9536545.1;Name=MCP9536545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03055;product=hypothetical protein;protein_id=MCP9536545.1;transl_table=11 JANDXE010000003.1 Genbank gene 194140 194415 . - . ID=gene-NND05_03060;Name=NND05_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03060 JANDXE010000003.1 GeneMarkS-2+ CDS 194140 194415 . - 0 ID=cds-MCP9536546.1;Parent=gene-NND05_03060;Dbxref=NCBI_GP:MCP9536546.1;Name=MCP9536546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03060;product=hypothetical protein;protein_id=MCP9536546.1;transl_table=11 JANDXE010000003.1 Genbank gene 194497 194964 . - . ID=gene-NND05_03065;Name=NND05_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03065 JANDXE010000003.1 Protein Homology CDS 194497 194964 . - 0 ID=cds-MCP9536547.1;Parent=gene-NND05_03065;Dbxref=NCBI_GP:MCP9536547.1;Name=MCP9536547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845272.1;locus_tag=NND05_03065;product=phage tail protein;protein_id=MCP9536547.1;transl_table=11 JANDXE010000003.1 Genbank gene 195093 195335 . - . ID=gene-NND05_03070;Name=NND05_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03070 JANDXE010000003.1 GeneMarkS-2+ CDS 195093 195335 . - 0 ID=cds-MCP9536548.1;Parent=gene-NND05_03070;Dbxref=NCBI_GP:MCP9536548.1;Name=MCP9536548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03070;product=hypothetical protein;protein_id=MCP9536548.1;transl_table=11 JANDXE010000003.1 Genbank gene 196071 196715 . - . ID=gene-NND05_03075;Name=NND05_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03075 JANDXE010000003.1 Protein Homology CDS 196071 196715 . - 0 ID=cds-MCP9536549.1;Parent=gene-NND05_03075;Dbxref=NCBI_GP:MCP9536549.1;Name=MCP9536549.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01554.2;locus_tag=NND05_03075;product=phage major capsid protein;protein_id=MCP9536549.1;transl_table=11 JANDXE010000003.1 Genbank gene 196992 197129 . - . ID=gene-NND05_03080;Name=NND05_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03080 JANDXE010000003.1 GeneMarkS-2+ CDS 196992 197129 . - 0 ID=cds-MCP9536550.1;Parent=gene-NND05_03080;Dbxref=NCBI_GP:MCP9536550.1;Name=MCP9536550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03080;product=hypothetical protein;protein_id=MCP9536550.1;transl_table=11 JANDXE010000003.1 Genbank pseudogene 197126 197692 . - . ID=gene-NND05_03085;Name=NND05_03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_03085;pseudo=true JANDXE010000003.1 Protein Homology CDS 197126 197692 . - 0 ID=cds-NND05_03085;Parent=gene-NND05_03085;Note=internal stop;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780128.1;locus_tag=NND05_03085;product=HK97 family phage prohead protease;pseudo=true;transl_table=11 JANDXE010000003.1 Genbank pseudogene 197959 198783 . - . ID=gene-NND05_03090;Name=NND05_03090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_03090;pseudo=true JANDXE010000003.1 Protein Homology CDS 197959 198783 . - 0 ID=cds-NND05_03090;Parent=gene-NND05_03090;Note=internal stop;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016732.2;locus_tag=NND05_03090;product=phage portal protein;pseudo=true;transl_table=11 JANDXE010000003.1 Genbank pseudogene 198993 200633 . - . ID=gene-NND05_03095;Name=NND05_03095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_03095;pseudo=true JANDXE010000003.1 Protein Homology CDS 198993 200633 . - 0 ID=cds-NND05_03095;Parent=gene-NND05_03095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644761.1;locus_tag=NND05_03095;product=terminase large subunit;pseudo=true;transl_table=11 JANDXE010000003.1 Genbank gene 200759 201175 . - . ID=gene-NND05_03100;Name=NND05_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03100 JANDXE010000003.1 Protein Homology CDS 200759 201175 . - 0 ID=cds-MCP9536551.1;Parent=gene-NND05_03100;Dbxref=NCBI_GP:MCP9536551.1;Name=MCP9536551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019106.2;locus_tag=NND05_03100;product=NUMOD4 motif-containing HNH endonuclease;protein_id=MCP9536551.1;transl_table=11 JANDXE010000003.1 Genbank gene 202027 202236 . - . ID=gene-NND05_03105;Name=NND05_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03105 JANDXE010000003.1 GeneMarkS-2+ CDS 202027 202236 . - 0 ID=cds-MCP9536552.1;Parent=gene-NND05_03105;Dbxref=NCBI_GP:MCP9536552.1;Name=MCP9536552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03105;product=hypothetical protein;protein_id=MCP9536552.1;transl_table=11 JANDXE010000003.1 Genbank gene 202986 203237 . - . ID=gene-NND05_03110;Name=NND05_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03110 JANDXE010000003.1 Protein Homology CDS 202986 203237 . - 0 ID=cds-MCP9536553.1;Parent=gene-NND05_03110;Dbxref=NCBI_GP:MCP9536553.1;Name=MCP9536553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016975.2;locus_tag=NND05_03110;product=P27 family phage terminase small subunit;protein_id=MCP9536553.1;transl_table=11 JANDXE010000003.1 Genbank gene 203390 203560 . + . ID=gene-NND05_03115;Name=NND05_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03115 JANDXE010000003.1 Protein Homology CDS 203390 203560 . + 0 ID=cds-MCP9536554.1;Parent=gene-NND05_03115;Dbxref=NCBI_GP:MCP9536554.1;Name=MCP9536554.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024064.2;locus_tag=NND05_03115;product=ribbon-helix-helix domain-containing protein;protein_id=MCP9536554.1;transl_table=11 JANDXE010000003.1 Genbank gene 204953 205747 . + . ID=gene-NND05_03120;Name=NND05_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03120 JANDXE010000003.1 GeneMarkS-2+ CDS 204953 205747 . + 0 ID=cds-MCP9536555.1;Parent=gene-NND05_03120;Dbxref=NCBI_GP:MCP9536555.1;Name=MCP9536555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03120;product=helix-turn-helix domain-containing protein;protein_id=MCP9536555.1;transl_table=11 JANDXE010000003.1 Genbank gene 205744 205956 . + . ID=gene-NND05_03125;Name=NND05_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03125 JANDXE010000003.1 GeneMarkS-2+ CDS 205744 205956 . + 0 ID=cds-MCP9536556.1;Parent=gene-NND05_03125;Dbxref=NCBI_GP:MCP9536556.1;Name=MCP9536556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03125;product=hypothetical protein;protein_id=MCP9536556.1;transl_table=11 JANDXE010000003.1 Genbank gene 206932 207318 . - . ID=gene-NND05_03130;Name=NND05_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03130 JANDXE010000003.1 GeneMarkS-2+ CDS 206932 207318 . - 0 ID=cds-MCP9536557.1;Parent=gene-NND05_03130;Dbxref=NCBI_GP:MCP9536557.1;Name=MCP9536557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03130;product=hypothetical protein;protein_id=MCP9536557.1;transl_table=11 JANDXE010000003.1 Genbank gene 207329 208249 . - . ID=gene-NND05_03135;Name=NND05_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03135 JANDXE010000003.1 Protein Homology CDS 207329 208249 . - 0 ID=cds-MCP9536558.1;Parent=gene-NND05_03135;Dbxref=NCBI_GP:MCP9536558.1;Name=MCP9536558.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:NF013122.2;locus_tag=NND05_03135;product=exonuclease domain-containing protein;protein_id=MCP9536558.1;transl_table=11 JANDXE010000003.1 Genbank gene 208585 211266 . + . ID=gene-NND05_03140;Name=NND05_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03140 JANDXE010000003.1 Protein Homology CDS 208585 211266 . + 0 ID=cds-MCP9536559.1;Parent=gene-NND05_03140;Dbxref=NCBI_GP:MCP9536559.1;Name=MCP9536559.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910014.1;locus_tag=NND05_03140;product=valine--tRNA ligase;protein_id=MCP9536559.1;transl_table=11 JANDXE010000003.1 Genbank gene 211311 212663 . + . ID=gene-NND05_03145;Name=NND05_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03145 JANDXE010000003.1 Protein Homology CDS 211311 212663 . + 0 ID=cds-MCP9536560.1;Parent=gene-NND05_03145;Dbxref=NCBI_GP:MCP9536560.1;Name=MCP9536560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847669.1;locus_tag=NND05_03145;product=clostripain-related cysteine peptidase;protein_id=MCP9536560.1;transl_table=11 JANDXE010000003.1 Genbank gene 213084 214055 . + . ID=gene-NND05_03150;Name=NND05_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03150 JANDXE010000003.1 Protein Homology CDS 213084 214055 . + 0 ID=cds-MCP9536561.1;Parent=gene-NND05_03150;Dbxref=NCBI_GP:MCP9536561.1;Name=MCP9536561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025629.2;locus_tag=NND05_03150;product=GYF domain-containing protein;protein_id=MCP9536561.1;transl_table=11 JANDXE010000003.1 Genbank gene 214343 214807 . - . ID=gene-NND05_03155;Name=NND05_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03155 JANDXE010000003.1 Protein Homology CDS 214343 214807 . - 0 ID=cds-MCP9536562.1;Parent=gene-NND05_03155;Dbxref=NCBI_GP:MCP9536562.1;Name=MCP9536562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040141.1;locus_tag=NND05_03155;product=DUF5675 family protein;protein_id=MCP9536562.1;transl_table=11 JANDXE010000003.1 Genbank gene 215073 215327 . - . ID=gene-NND05_03160;Name=NND05_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03160 JANDXE010000003.1 Protein Homology CDS 215073 215327 . - 0 ID=cds-MCP9536563.1;Parent=gene-NND05_03160;Dbxref=NCBI_GP:MCP9536563.1;Name=MCP9536563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_03160;product=DUF4248 domain-containing protein;protein_id=MCP9536563.1;transl_table=11 JANDXE010000003.1 Genbank gene 215411 215851 . - . ID=gene-NND05_03165;Name=NND05_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03165 JANDXE010000003.1 Protein Homology CDS 215411 215851 . - 0 ID=cds-MCP9536564.1;Parent=gene-NND05_03165;Dbxref=NCBI_GP:MCP9536564.1;Name=MCP9536564.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004321221.1;locus_tag=NND05_03165;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9536564.1;transl_table=11 JANDXE010000003.1 Genbank gene 216643 217104 . + . ID=gene-NND05_03170;Name=NND05_03170;end_range=217104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03170;partial=true JANDXE010000003.1 GeneMarkS-2+ CDS 216643 217104 . + 0 ID=cds-MCP9536565.1;Parent=gene-NND05_03170;Dbxref=NCBI_GP:MCP9536565.1;Name=MCP9536565.1;end_range=217104,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03170;partial=true;product=hypothetical protein;protein_id=MCP9536565.1;transl_table=11 ##sequence-region JANDXE010000041.1 1 22525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000041.1 Genbank region 1 22525 . + . ID=JANDXE010000041.1:1..22525;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000041.1 Genbank gene 406 1164 . - . ID=gene-NND05_14065;Name=NND05_14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14065 JANDXE010000041.1 GeneMarkS-2+ CDS 406 1164 . - 0 ID=cds-MCP9538648.1;Parent=gene-NND05_14065;Dbxref=NCBI_GP:MCP9538648.1;Name=MCP9538648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14065;product=hypothetical protein;protein_id=MCP9538648.1;transl_table=11 JANDXE010000041.1 Genbank gene 1285 2076 . - . ID=gene-NND05_14070;Name=NND05_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14070 JANDXE010000041.1 Protein Homology CDS 1285 2076 . - 0 ID=cds-MCP9538649.1;Parent=gene-NND05_14070;Dbxref=NCBI_GP:MCP9538649.1;Name=MCP9538649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846861.1;locus_tag=NND05_14070;product=PorT family protein;protein_id=MCP9538649.1;transl_table=11 JANDXE010000041.1 Genbank gene 2122 3300 . - . ID=gene-NND05_14075;Name=NND05_14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14075 JANDXE010000041.1 Protein Homology CDS 2122 3300 . - 0 ID=cds-MCP9538650.1;Parent=gene-NND05_14075;Dbxref=NCBI_GP:MCP9538650.1;Name=MCP9538650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348780.1;locus_tag=NND05_14075;product=PCMD domain-containing protein;protein_id=MCP9538650.1;transl_table=11 JANDXE010000041.1 Genbank gene 3557 4174 . - . ID=gene-NND05_14080;Name=NND05_14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14080 JANDXE010000041.1 Protein Homology CDS 3557 4174 . - 0 ID=cds-MCP9538651.1;Parent=gene-NND05_14080;Dbxref=NCBI_GP:MCP9538651.1;Name=MCP9538651.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_14080;product=HU family DNA-binding protein;protein_id=MCP9538651.1;transl_table=11 JANDXE010000041.1 Genbank gene 4246 4344 . - . ID=gene-NND05_14085;Name=NND05_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14085 JANDXE010000041.1 Protein Homology CDS 4246 4344 . - 0 ID=cds-MCP9538652.1;Parent=gene-NND05_14085;Dbxref=NCBI_GP:MCP9538652.1;Name=MCP9538652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004303901.1;locus_tag=NND05_14085;product=smalltalk protein;protein_id=MCP9538652.1;transl_table=11 JANDXE010000041.1 Genbank gene 4420 4869 . - . ID=gene-NND05_14090;Name=NND05_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14090 JANDXE010000041.1 Protein Homology CDS 4420 4869 . - 0 ID=cds-MCP9538653.1;Parent=gene-NND05_14090;Dbxref=NCBI_GP:MCP9538653.1;Name=MCP9538653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337974.1;locus_tag=NND05_14090;product=D-Ala-D-Ala carboxypeptidase family metallohydrolase;protein_id=MCP9538653.1;transl_table=11 JANDXE010000041.1 Genbank gene 5119 5550 . - . ID=gene-NND05_14095;Name=NND05_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14095 JANDXE010000041.1 GeneMarkS-2+ CDS 5119 5550 . - 0 ID=cds-MCP9538654.1;Parent=gene-NND05_14095;Dbxref=NCBI_GP:MCP9538654.1;Name=MCP9538654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14095;product=hypothetical protein;protein_id=MCP9538654.1;transl_table=11 JANDXE010000041.1 Genbank gene 5575 7164 . - . ID=gene-NND05_14100;Name=NND05_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14100 JANDXE010000041.1 Protein Homology CDS 5575 7164 . - 0 ID=cds-MCP9538655.1;Parent=gene-NND05_14100;Dbxref=NCBI_GP:MCP9538655.1;Name=MCP9538655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015736.2;locus_tag=NND05_14100;product=bifunctional DNA primase/helicase;protein_id=MCP9538655.1;transl_table=11 JANDXE010000041.1 Genbank gene 7222 7932 . - . ID=gene-NND05_14105;Name=NND05_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14105 JANDXE010000041.1 GeneMarkS-2+ CDS 7222 7932 . - 0 ID=cds-MCP9538656.1;Parent=gene-NND05_14105;Dbxref=NCBI_GP:MCP9538656.1;Name=MCP9538656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14105;product=hypothetical protein;protein_id=MCP9538656.1;transl_table=11 JANDXE010000041.1 Genbank gene 8410 8955 . + . ID=gene-NND05_14110;Name=NND05_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14110 JANDXE010000041.1 Protein Homology CDS 8410 8955 . + 0 ID=cds-MCP9538657.1;Parent=gene-NND05_14110;Dbxref=NCBI_GP:MCP9538657.1;Name=MCP9538657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015532943.1;locus_tag=NND05_14110;product=transposase;protein_id=MCP9538657.1;transl_table=11 JANDXE010000041.1 Genbank gene 9420 11204 . - . ID=gene-NND05_14115;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=NND05_14115 JANDXE010000041.1 Protein Homology CDS 9420 11204 . - 0 ID=cds-MCP9538658.1;Parent=gene-NND05_14115;Dbxref=NCBI_GP:MCP9538658.1;Name=MCP9538658.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846859.1;locus_tag=NND05_14115;product=30S ribosomal protein S1;protein_id=MCP9538658.1;transl_table=11 JANDXE010000041.1 Genbank gene 11452 11595 . - . ID=gene-NND05_14120;Name=NND05_14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14120 JANDXE010000041.1 GeneMarkS-2+ CDS 11452 11595 . - 0 ID=cds-MCP9538659.1;Parent=gene-NND05_14120;Dbxref=NCBI_GP:MCP9538659.1;Name=MCP9538659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14120;product=hypothetical protein;protein_id=MCP9538659.1;transl_table=11 JANDXE010000041.1 Genbank gene 11755 13185 . + . ID=gene-NND05_14125;Name=NND05_14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14125 JANDXE010000041.1 Protein Homology CDS 11755 13185 . + 0 ID=cds-MCP9538660.1;Parent=gene-NND05_14125;Dbxref=NCBI_GP:MCP9538660.1;Name=MCP9538660.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846857.1;locus_tag=NND05_14125;product=SLC13 family permease;protein_id=MCP9538660.1;transl_table=11 JANDXE010000041.1 Genbank gene 13490 14467 . + . ID=gene-NND05_14130;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=NND05_14130 JANDXE010000041.1 Protein Homology CDS 13490 14467 . + 0 ID=cds-MCP9538661.1;Parent=gene-NND05_14130;Dbxref=NCBI_GP:MCP9538661.1;Name=MCP9538661.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371066.1;locus_tag=NND05_14130;product=6-phosphofructokinase;protein_id=MCP9538661.1;transl_table=11 JANDXE010000041.1 Genbank gene 14755 16281 . + . ID=gene-NND05_14135;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NND05_14135 JANDXE010000041.1 Protein Homology CDS 14755 16281 . + 0 ID=cds-MCP9538662.1;Parent=gene-NND05_14135;Dbxref=NCBI_GP:MCP9538662.1;Name=MCP9538662.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967270.1;locus_tag=NND05_14135;product=F0F1 ATP synthase subunit beta;protein_id=MCP9538662.1;transl_table=11 JANDXE010000041.1 Genbank gene 16300 16539 . + . ID=gene-NND05_14140;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=NND05_14140 JANDXE010000041.1 Protein Homology CDS 16300 16539 . + 0 ID=cds-MCP9538663.1;Parent=gene-NND05_14140;Dbxref=NCBI_GP:MCP9538663.1;Name=MCP9538663.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpC;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007368789.1;locus_tag=NND05_14140;product=ATP synthase F1 subunit epsilon;protein_id=MCP9538663.1;transl_table=11 JANDXE010000041.1 Genbank gene 16580 17023 . + . ID=gene-NND05_14145;Name=NND05_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14145 JANDXE010000041.1 GeneMarkS-2+ CDS 16580 17023 . + 0 ID=cds-MCP9538664.1;Parent=gene-NND05_14145;Dbxref=NCBI_GP:MCP9538664.1;Name=MCP9538664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14145;product=hypothetical protein;protein_id=MCP9538664.1;transl_table=11 JANDXE010000041.1 Genbank gene 17072 18181 . + . ID=gene-NND05_14150;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NND05_14150 JANDXE010000041.1 Protein Homology CDS 17072 18181 . + 0 ID=cds-MCP9538665.1;Parent=gene-NND05_14150;Dbxref=NCBI_GP:MCP9538665.1;Name=MCP9538665.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846852.1;locus_tag=NND05_14150;product=F0F1 ATP synthase subunit A;protein_id=MCP9538665.1;transl_table=11 JANDXE010000041.1 Genbank gene 18225 18467 . + . ID=gene-NND05_14155;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NND05_14155 JANDXE010000041.1 Protein Homology CDS 18225 18467 . + 0 ID=cds-MCP9538666.1;Parent=gene-NND05_14155;Dbxref=NCBI_GP:MCP9538666.1;Name=MCP9538666.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952937.1;locus_tag=NND05_14155;product=ATP synthase F0 subunit C;protein_id=MCP9538666.1;transl_table=11 JANDXE010000041.1 Genbank gene 18630 19133 . + . ID=gene-NND05_14160;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=NND05_14160 JANDXE010000041.1 Protein Homology CDS 18630 19133 . + 0 ID=cds-MCP9538667.1;Parent=gene-NND05_14160;Dbxref=NCBI_GP:MCP9538667.1;Name=MCP9538667.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336926.1;locus_tag=NND05_14160;product=F0F1 ATP synthase subunit B;protein_id=MCP9538667.1;transl_table=11 JANDXE010000041.1 Genbank gene 19139 19675 . + . ID=gene-NND05_14165;Name=NND05_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14165 JANDXE010000041.1 Protein Homology CDS 19139 19675 . + 0 ID=cds-MCP9538668.1;Parent=gene-NND05_14165;Dbxref=NCBI_GP:MCP9538668.1;Name=MCP9538668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375982.1;locus_tag=NND05_14165;product=F0F1 ATP synthase subunit delta;protein_id=MCP9538668.1;transl_table=11 JANDXE010000041.1 Genbank gene 19767 21353 . + . ID=gene-NND05_14170;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NND05_14170 JANDXE010000041.1 Protein Homology CDS 19767 21353 . + 0 ID=cds-MCP9538669.1;Parent=gene-NND05_14170;Dbxref=NCBI_GP:MCP9538669.1;Name=MCP9538669.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846848.1;locus_tag=NND05_14170;product=F0F1 ATP synthase subunit alpha;protein_id=MCP9538669.1;transl_table=11 JANDXE010000041.1 Genbank gene 21360 22334 . + . ID=gene-NND05_14175;Name=NND05_14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14175 JANDXE010000041.1 Protein Homology CDS 21360 22334 . + 0 ID=cds-MCP9538670.1;Parent=gene-NND05_14175;Dbxref=NCBI_GP:MCP9538670.1;Name=MCP9538670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340819.1;locus_tag=NND05_14175;product=F0F1 ATP synthase subunit gamma;protein_id=MCP9538670.1;transl_table=11 ##sequence-region JANDXE010000042.1 1 20669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000042.1 Genbank region 1 20669 . + . ID=JANDXE010000042.1:1..20669;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000042.1 Genbank gene 144 995 . + . ID=gene-NND05_14180;Name=NND05_14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14180 JANDXE010000042.1 Protein Homology CDS 144 995 . + 0 ID=cds-MCP9538671.1;Parent=gene-NND05_14180;Dbxref=NCBI_GP:MCP9538671.1;Name=MCP9538671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343909.1;locus_tag=NND05_14180;product=SGNH/GDSL hydrolase family protein;protein_id=MCP9538671.1;transl_table=11 JANDXE010000042.1 Genbank gene 1860 2246 . + . ID=gene-NND05_14185;Name=NND05_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14185 JANDXE010000042.1 Protein Homology CDS 1860 2246 . + 0 ID=cds-MCP9538672.1;Parent=gene-NND05_14185;Dbxref=NCBI_GP:MCP9538672.1;Name=MCP9538672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897631.1;locus_tag=NND05_14185;product=VOC family protein;protein_id=MCP9538672.1;transl_table=11 JANDXE010000042.1 Genbank gene 2274 2807 . + . ID=gene-NND05_14190;Name=NND05_14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14190 JANDXE010000042.1 Protein Homology CDS 2274 2807 . + 0 ID=cds-MCP9538673.1;Parent=gene-NND05_14190;Dbxref=NCBI_GP:MCP9538673.1;Name=MCP9538673.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848178.1;locus_tag=NND05_14190;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=MCP9538673.1;transl_table=11 JANDXE010000042.1 Genbank gene 2835 4070 . + . ID=gene-NND05_14195;Name=NND05_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14195 JANDXE010000042.1 Protein Homology CDS 2835 4070 . + 0 ID=cds-MCP9538674.1;Parent=gene-NND05_14195;Dbxref=NCBI_GP:MCP9538674.1;Name=MCP9538674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901220.1;locus_tag=NND05_14195;product=MFS transporter;protein_id=MCP9538674.1;transl_table=11 JANDXE010000042.1 Genbank gene 4085 4576 . + . ID=gene-NND05_14200;Name=NND05_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14200 JANDXE010000042.1 Protein Homology CDS 4085 4576 . + 0 ID=cds-MCP9538675.1;Parent=gene-NND05_14200;Dbxref=NCBI_GP:MCP9538675.1;Name=MCP9538675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006745600.1;locus_tag=NND05_14200;product=DUF4186 domain-containing protein;protein_id=MCP9538675.1;transl_table=11 JANDXE010000042.1 Genbank gene 4803 5069 . - . ID=gene-NND05_14205;Name=NND05_14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14205 JANDXE010000042.1 GeneMarkS-2+ CDS 4803 5069 . - 0 ID=cds-MCP9538676.1;Parent=gene-NND05_14205;Dbxref=NCBI_GP:MCP9538676.1;Name=MCP9538676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14205;product=hypothetical protein;protein_id=MCP9538676.1;transl_table=11 JANDXE010000042.1 cmsearch riboswitch 5068 5180 . - . ID=id-JANDXE010000042.1:5068..5180;Dbxref=RFAM:RF01725;Note=SAM-I-IV-variant riboswitch%3B SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JANDXE010000042.1 Genbank gene 5473 5886 . + . ID=gene-NND05_14210;Name=NND05_14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14210 JANDXE010000042.1 Protein Homology CDS 5473 5886 . + 0 ID=cds-MCP9538677.1;Parent=gene-NND05_14210;Dbxref=NCBI_GP:MCP9538677.1;Name=MCP9538677.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008617736.1;locus_tag=NND05_14210;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=MCP9538677.1;transl_table=11 JANDXE010000042.1 Genbank gene 5916 6671 . - . ID=gene-NND05_14215;Name=NND05_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14215 JANDXE010000042.1 GeneMarkS-2+ CDS 5916 6671 . - 0 ID=cds-MCP9538678.1;Parent=gene-NND05_14215;Dbxref=NCBI_GP:MCP9538678.1;Name=MCP9538678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14215;product=hypothetical protein;protein_id=MCP9538678.1;transl_table=11 JANDXE010000042.1 Genbank gene 6661 6903 . - . ID=gene-NND05_14220;Name=NND05_14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14220 JANDXE010000042.1 Protein Homology CDS 6661 6903 . - 0 ID=cds-MCP9538679.1;Parent=gene-NND05_14220;Dbxref=NCBI_GP:MCP9538679.1;Name=MCP9538679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562434.1;locus_tag=NND05_14220;product=DNA-binding protein;protein_id=MCP9538679.1;transl_table=11 JANDXE010000042.1 Genbank gene 6910 7878 . - . ID=gene-NND05_14225;Name=NND05_14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14225 JANDXE010000042.1 Protein Homology CDS 6910 7878 . - 0 ID=cds-MCP9538680.1;Parent=gene-NND05_14225;Dbxref=NCBI_GP:MCP9538680.1;Name=MCP9538680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007212537.1;locus_tag=NND05_14225;product=SPFH domain-containing protein;protein_id=MCP9538680.1;transl_table=11 JANDXE010000042.1 Genbank gene 8106 9440 . - . ID=gene-NND05_14230;Name=NND05_14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14230 JANDXE010000042.1 Protein Homology CDS 8106 9440 . - 0 ID=cds-MCP9538681.1;Parent=gene-NND05_14230;Dbxref=NCBI_GP:MCP9538681.1;Name=MCP9538681.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846345.1;locus_tag=NND05_14230;product=MFS transporter;protein_id=MCP9538681.1;transl_table=11 JANDXE010000042.1 Genbank gene 9450 13313 . - . ID=gene-NND05_14235;Name=NND05_14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14235 JANDXE010000042.1 Protein Homology CDS 9450 13313 . - 0 ID=cds-MCP9538682.1;Parent=gene-NND05_14235;Dbxref=NCBI_GP:MCP9538682.1;Name=MCP9538682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846344.1;locus_tag=NND05_14235;product=DUF4922 domain-containing protein;protein_id=MCP9538682.1;transl_table=11 JANDXE010000042.1 Genbank gene 13394 14464 . + . ID=gene-NND05_14240;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=NND05_14240 JANDXE010000042.1 Protein Homology CDS 13394 14464 . + 0 ID=cds-MCP9538683.1;Parent=gene-NND05_14240;Dbxref=NCBI_GP:MCP9538683.1;Name=MCP9538683.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846343.1;locus_tag=NND05_14240;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=MCP9538683.1;transl_table=11 JANDXE010000042.1 Genbank gene 14478 15425 . + . ID=gene-NND05_14245;Name=NND05_14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14245 JANDXE010000042.1 Protein Homology CDS 14478 15425 . + 0 ID=cds-MCP9538684.1;Parent=gene-NND05_14245;Dbxref=NCBI_GP:MCP9538684.1;Name=MCP9538684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027451.2;locus_tag=NND05_14245;product=DUF4837 family protein;protein_id=MCP9538684.1;transl_table=11 JANDXE010000042.1 Genbank pseudogene 15432 16520 . + . ID=gene-NND05_14250;Name=NND05_14250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14250;pseudo=true JANDXE010000042.1 Protein Homology CDS 15432 16520 . + 0 ID=cds-NND05_14250;Parent=gene-NND05_14250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018921025.1;locus_tag=NND05_14250;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;pseudo=true;transl_table=11 JANDXE010000042.1 Genbank gene 17018 18349 . + . ID=gene-NND05_14255;Name=NND05_14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14255 JANDXE010000042.1 Protein Homology CDS 17018 18349 . + 0 ID=cds-MCP9538685.1;Parent=gene-NND05_14255;Dbxref=NCBI_GP:MCP9538685.1;Name=MCP9538685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361310.1;locus_tag=NND05_14255;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9538685.1;transl_table=11 JANDXE010000042.1 Genbank gene 18438 18911 . + . ID=gene-NND05_14260;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=NND05_14260 JANDXE010000042.1 Protein Homology CDS 18438 18911 . + 0 ID=cds-MCP9538686.1;Parent=gene-NND05_14260;Dbxref=NCBI_GP:MCP9538686.1;Name=MCP9538686.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709832.1;locus_tag=NND05_14260;product=LPS assembly lipoprotein LptE;protein_id=MCP9538686.1;transl_table=11 JANDXE010000042.1 Genbank gene 18946 19716 . + . ID=gene-NND05_14265;Name=NND05_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14265 JANDXE010000042.1 Protein Homology CDS 18946 19716 . + 0 ID=cds-MCP9538687.1;Parent=gene-NND05_14265;Dbxref=NCBI_GP:MCP9538687.1;Name=MCP9538687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368127.1;locus_tag=NND05_14265;product=tetratricopeptide repeat protein;protein_id=MCP9538687.1;transl_table=11 JANDXE010000042.1 Genbank gene 19783 20178 . + . ID=gene-NND05_14270;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NND05_14270 JANDXE010000042.1 Protein Homology CDS 19783 20178 . + 0 ID=cds-MCP9538688.1;Parent=gene-NND05_14270;Dbxref=NCBI_GP:MCP9538688.1;Name=MCP9538688.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846337.1;locus_tag=NND05_14270;product=preprotein translocase subunit SecG;protein_id=MCP9538688.1;transl_table=11 JANDXE010000042.1 Genbank gene 20256 20331 . + . ID=gene-NND05_14275;Name=NND05_14275;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_14275 JANDXE010000042.1 tRNAscan-SE tRNA 20256 20331 . + . ID=rna-NND05_14275;Parent=gene-NND05_14275;anticodon=(pos:20291..20293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_14275;product=tRNA-His JANDXE010000042.1 tRNAscan-SE exon 20256 20331 . + . ID=exon-NND05_14275-1;Parent=rna-NND05_14275;anticodon=(pos:20291..20293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_14275;product=tRNA-His JANDXE010000042.1 Genbank gene 20364 20439 . + . ID=gene-NND05_14280;Name=NND05_14280;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_14280 JANDXE010000042.1 tRNAscan-SE tRNA 20364 20439 . + . ID=rna-NND05_14280;Parent=gene-NND05_14280;anticodon=(pos:20399..20401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_14280;product=tRNA-His JANDXE010000042.1 tRNAscan-SE exon 20364 20439 . + . ID=exon-NND05_14280-1;Parent=rna-NND05_14280;anticodon=(pos:20399..20401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_14280;product=tRNA-His ##sequence-region JANDXE010000043.1 1 19967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000043.1 Genbank region 1 19967 . + . ID=JANDXE010000043.1:1..19967;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000043.1 Genbank gene 724 1386 . - . ID=gene-NND05_14285;Name=NND05_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14285 JANDXE010000043.1 Protein Homology CDS 724 1386 . - 0 ID=cds-MCP9538689.1;Parent=gene-NND05_14285;Dbxref=NCBI_GP:MCP9538689.1;Name=MCP9538689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_14285;product=hypothetical protein;protein_id=MCP9538689.1;transl_table=11 JANDXE010000043.1 Genbank gene 1424 2392 . - . ID=gene-NND05_14290;Name=NND05_14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14290 JANDXE010000043.1 Protein Homology CDS 1424 2392 . - 0 ID=cds-MCP9538690.1;Parent=gene-NND05_14290;Dbxref=NCBI_GP:MCP9538690.1;Name=MCP9538690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=NND05_14290;product=ATP-binding protein;protein_id=MCP9538690.1;transl_table=11 JANDXE010000043.1 Genbank gene 2889 3104 . + . ID=gene-NND05_14295;Name=NND05_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14295 JANDXE010000043.1 Protein Homology CDS 2889 3104 . + 0 ID=cds-MCP9538691.1;Parent=gene-NND05_14295;Dbxref=NCBI_GP:MCP9538691.1;Name=MCP9538691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004350708.1;locus_tag=NND05_14295;product=helix-turn-helix domain-containing protein;protein_id=MCP9538691.1;transl_table=11 JANDXE010000043.1 Genbank gene 3101 4696 . + . ID=gene-NND05_14300;Name=NND05_14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14300 JANDXE010000043.1 Protein Homology CDS 3101 4696 . + 0 ID=cds-MCP9538692.1;Parent=gene-NND05_14300;Dbxref=NCBI_GP:MCP9538692.1;Name=MCP9538692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011108671.1;locus_tag=NND05_14300;product=putative DNA binding domain-containing protein;protein_id=MCP9538692.1;transl_table=11 JANDXE010000043.1 Genbank gene 4704 5891 . + . ID=gene-NND05_14305;Name=NND05_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14305 JANDXE010000043.1 Protein Homology CDS 4704 5891 . + 0 ID=cds-MCP9538693.1;Parent=gene-NND05_14305;Dbxref=NCBI_GP:MCP9538693.1;Name=MCP9538693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_14305;product=helix-turn-helix domain-containing protein;protein_id=MCP9538693.1;transl_table=11 JANDXE010000043.1 Genbank gene 6420 7607 . + . ID=gene-NND05_14310;Name=NND05_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14310 JANDXE010000043.1 Protein Homology CDS 6420 7607 . + 0 ID=cds-MCP9538694.1;Parent=gene-NND05_14310;Dbxref=NCBI_GP:MCP9538694.1;Name=MCP9538694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=NND05_14310;product=OmpA family protein;protein_id=MCP9538694.1;transl_table=11 JANDXE010000043.1 Genbank gene 7629 8543 . + . ID=gene-NND05_14315;Name=NND05_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14315 JANDXE010000043.1 Protein Homology CDS 7629 8543 . + 0 ID=cds-MCP9538695.1;Parent=gene-NND05_14315;Dbxref=NCBI_GP:MCP9538695.1;Name=MCP9538695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846242.1;locus_tag=NND05_14315;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9538695.1;transl_table=11 JANDXE010000043.1 Genbank gene 8605 9507 . + . ID=gene-NND05_14320;Name=NND05_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14320 JANDXE010000043.1 Protein Homology CDS 8605 9507 . + 0 ID=cds-MCP9538696.1;Parent=gene-NND05_14320;Dbxref=NCBI_GP:MCP9538696.1;Name=MCP9538696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14320;product=fimbrillin family protein;protein_id=MCP9538696.1;transl_table=11 JANDXE010000043.1 Genbank gene 9538 10503 . + . ID=gene-NND05_14325;Name=NND05_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14325 JANDXE010000043.1 Protein Homology CDS 9538 10503 . + 0 ID=cds-MCP9538697.1;Parent=gene-NND05_14325;Dbxref=NCBI_GP:MCP9538697.1;Name=MCP9538697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14325;product=fimbrillin family protein;protein_id=MCP9538697.1;transl_table=11 JANDXE010000043.1 Genbank gene 10540 12117 . + . ID=gene-NND05_14330;Name=NND05_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14330 JANDXE010000043.1 Protein Homology CDS 10540 12117 . + 0 ID=cds-MCP9538698.1;Parent=gene-NND05_14330;Dbxref=NCBI_GP:MCP9538698.1;Name=MCP9538698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14330;product=fimbrillin family protein;protein_id=MCP9538698.1;transl_table=11 JANDXE010000043.1 Genbank gene 12362 12730 . + . ID=gene-NND05_14335;Name=NND05_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14335 JANDXE010000043.1 Protein Homology CDS 12362 12730 . + 0 ID=cds-MCP9538699.1;Parent=gene-NND05_14335;Dbxref=NCBI_GP:MCP9538699.1;Name=MCP9538699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016296.2;locus_tag=NND05_14335;product=LytTR family transcriptional regulator;protein_id=MCP9538699.1;transl_table=11 JANDXE010000043.1 Genbank gene 12904 13485 . + . ID=gene-NND05_14340;Name=NND05_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14340 JANDXE010000043.1 GeneMarkS-2+ CDS 12904 13485 . + 0 ID=cds-MCP9538700.1;Parent=gene-NND05_14340;Dbxref=NCBI_GP:MCP9538700.1;Name=MCP9538700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14340;product=hypothetical protein;protein_id=MCP9538700.1;transl_table=11 JANDXE010000043.1 Genbank gene 13488 14339 . + . ID=gene-NND05_14345;Name=NND05_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14345 JANDXE010000043.1 Protein Homology CDS 13488 14339 . + 0 ID=cds-MCP9538701.1;Parent=gene-NND05_14345;Dbxref=NCBI_GP:MCP9538701.1;Name=MCP9538701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005788700.1;locus_tag=NND05_14345;product=DUF2589 domain-containing protein;protein_id=MCP9538701.1;transl_table=11 JANDXE010000043.1 Genbank gene 14364 15143 . + . ID=gene-NND05_14350;Name=NND05_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14350 JANDXE010000043.1 GeneMarkS-2+ CDS 14364 15143 . + 0 ID=cds-MCP9538702.1;Parent=gene-NND05_14350;Dbxref=NCBI_GP:MCP9538702.1;Name=MCP9538702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14350;product=hypothetical protein;protein_id=MCP9538702.1;transl_table=11 JANDXE010000043.1 Genbank gene 15174 15785 . + . ID=gene-NND05_14355;Name=NND05_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14355 JANDXE010000043.1 Protein Homology CDS 15174 15785 . + 0 ID=cds-MCP9538703.1;Parent=gene-NND05_14355;Dbxref=NCBI_GP:MCP9538703.1;Name=MCP9538703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009293202.1;locus_tag=NND05_14355;product=DUF2589 domain-containing protein;protein_id=MCP9538703.1;transl_table=11 JANDXE010000043.1 Genbank gene 15775 16005 . + . ID=gene-NND05_14360;Name=NND05_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14360 JANDXE010000043.1 Protein Homology CDS 15775 16005 . + 0 ID=cds-MCP9538704.1;Parent=gene-NND05_14360;Dbxref=NCBI_GP:MCP9538704.1;Name=MCP9538704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005788695.1;locus_tag=NND05_14360;product=hypothetical protein;protein_id=MCP9538704.1;transl_table=11 JANDXE010000043.1 Genbank gene 16019 16498 . + . ID=gene-NND05_14365;Name=NND05_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14365 JANDXE010000043.1 GeneMarkS-2+ CDS 16019 16498 . + 0 ID=cds-MCP9538705.1;Parent=gene-NND05_14365;Dbxref=NCBI_GP:MCP9538705.1;Name=MCP9538705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14365;product=hypothetical protein;protein_id=MCP9538705.1;transl_table=11 JANDXE010000043.1 Genbank gene 16559 17359 . + . ID=gene-NND05_14370;Name=NND05_14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14370 JANDXE010000043.1 Protein Homology CDS 16559 17359 . + 0 ID=cds-MCP9538706.1;Parent=gene-NND05_14370;Dbxref=NCBI_GP:MCP9538706.1;Name=MCP9538706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005788692.1;locus_tag=NND05_14370;product=N-acetylmuramidase family protein;protein_id=MCP9538706.1;transl_table=11 JANDXE010000043.1 Genbank gene 17455 18207 . - . ID=gene-NND05_14375;Name=NND05_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14375 JANDXE010000043.1 Protein Homology CDS 17455 18207 . - 0 ID=cds-MCP9538707.1;Parent=gene-NND05_14375;Dbxref=NCBI_GP:MCP9538707.1;Name=MCP9538707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011108663.1;locus_tag=NND05_14375;product=hypothetical protein;protein_id=MCP9538707.1;transl_table=11 JANDXE010000043.1 Genbank gene 18243 19193 . - . ID=gene-NND05_14380;Name=NND05_14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14380 JANDXE010000043.1 Protein Homology CDS 18243 19193 . - 0 ID=cds-MCP9538708.1;Parent=gene-NND05_14380;Dbxref=NCBI_GP:MCP9538708.1;Name=MCP9538708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656563.1;locus_tag=NND05_14380;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MCP9538708.1;transl_table=11 JANDXE010000043.1 Genbank gene 19190 19603 . - . ID=gene-NND05_14385;Name=NND05_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14385 JANDXE010000043.1 Protein Homology CDS 19190 19603 . - 0 ID=cds-MCP9538709.1;Parent=gene-NND05_14385;Dbxref=NCBI_GP:MCP9538709.1;Name=MCP9538709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628605.1;locus_tag=NND05_14385;product=MobC family plasmid mobilization relaxosome protein;protein_id=MCP9538709.1;transl_table=11 JANDXE010000043.1 Genbank gene 19788 19967 . - . ID=gene-NND05_14390;Name=NND05_14390;end_range=19967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14390;partial=true JANDXE010000043.1 Protein Homology CDS 19788 19967 . - 0 ID=cds-MCP9538710.1;Parent=gene-NND05_14390;Dbxref=NCBI_GP:MCP9538710.1;Name=MCP9538710.1;end_range=19967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_14390;partial=true;product=DUF3408 domain-containing protein;protein_id=MCP9538710.1;transl_table=11 ##sequence-region JANDXE010000044.1 1 19223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000044.1 Genbank region 1 19223 . + . ID=JANDXE010000044.1:1..19223;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000044.1 Genbank gene 728 1489 . + . ID=gene-NND05_14395;Name=NND05_14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14395 JANDXE010000044.1 Protein Homology CDS 728 1489 . + 0 ID=cds-MCP9538711.1;Parent=gene-NND05_14395;Dbxref=NCBI_GP:MCP9538711.1;Name=MCP9538711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004322043.1;locus_tag=NND05_14395;product=ParA family protein;protein_id=MCP9538711.1;transl_table=11 JANDXE010000044.1 Genbank gene 1495 1905 . + . ID=gene-NND05_14400;Name=NND05_14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14400 JANDXE010000044.1 Protein Homology CDS 1495 1905 . + 0 ID=cds-MCP9538712.1;Parent=gene-NND05_14400;Dbxref=NCBI_GP:MCP9538712.1;Name=MCP9538712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008617878.1;locus_tag=NND05_14400;product=DUF3408 domain-containing protein;protein_id=MCP9538712.1;transl_table=11 JANDXE010000044.1 Genbank gene 1907 2608 . + . ID=gene-NND05_14405;Name=NND05_14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14405 JANDXE010000044.1 GeneMarkS-2+ CDS 1907 2608 . + 0 ID=cds-MCP9538713.1;Parent=gene-NND05_14405;Dbxref=NCBI_GP:MCP9538713.1;Name=MCP9538713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14405;product=hypothetical protein;protein_id=MCP9538713.1;transl_table=11 JANDXE010000044.1 Genbank gene 2631 3110 . + . ID=gene-NND05_14410;Name=NND05_14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14410 JANDXE010000044.1 Protein Homology CDS 2631 3110 . + 0 ID=cds-MCP9538714.1;Parent=gene-NND05_14410;Dbxref=NCBI_GP:MCP9538714.1;Name=MCP9538714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312218.1;locus_tag=NND05_14410;product=DUF3408 domain-containing protein;protein_id=MCP9538714.1;transl_table=11 JANDXE010000044.1 Genbank gene 3271 3576 . + . ID=gene-NND05_14415;Name=NND05_14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14415 JANDXE010000044.1 Protein Homology CDS 3271 3576 . + 0 ID=cds-MCP9538715.1;Parent=gene-NND05_14415;Dbxref=NCBI_GP:MCP9538715.1;Name=MCP9538715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005816811.1;locus_tag=NND05_14415;product=DUF4134 domain-containing protein;protein_id=MCP9538715.1;transl_table=11 JANDXE010000044.1 Genbank gene 3597 3923 . + . ID=gene-NND05_14420;Name=NND05_14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14420 JANDXE010000044.1 Protein Homology CDS 3597 3923 . + 0 ID=cds-MCP9538716.1;Parent=gene-NND05_14420;Dbxref=NCBI_GP:MCP9538716.1;Name=MCP9538716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796932.1;locus_tag=NND05_14420;product=DUF4133 domain-containing protein;protein_id=MCP9538716.1;transl_table=11 JANDXE010000044.1 Genbank gene 3920 6421 . + . ID=gene-NND05_14425;Name=NND05_14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14425 JANDXE010000044.1 Protein Homology CDS 3920 6421 . + 0 ID=cds-MCP9538717.1;Parent=gene-NND05_14425;Dbxref=NCBI_GP:MCP9538717.1;Name=MCP9538717.1;Ontology_term=GO:0032196,GO:0016887,GO:0032991;gbkey=CDS;go_component=protein-containing complex|0032991||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007215227.1;locus_tag=NND05_14425;product=TraG family conjugative transposon ATPase;protein_id=MCP9538717.1;transl_table=11 JANDXE010000044.1 Genbank gene 6451 7080 . + . ID=gene-NND05_14430;Name=NND05_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14430 JANDXE010000044.1 Protein Homology CDS 6451 7080 . + 0 ID=cds-MCP9538718.1;Parent=gene-NND05_14430;Dbxref=NCBI_GP:MCP9538718.1;Name=MCP9538718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008645444.1;locus_tag=NND05_14430;product=DUF4141 domain-containing protein;protein_id=MCP9538718.1;transl_table=11 JANDXE010000044.1 Genbank gene 7084 8097 . + . ID=gene-NND05_14435;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=NND05_14435 JANDXE010000044.1 Protein Homology CDS 7084 8097 . + 0 ID=cds-MCP9538719.1;Parent=gene-NND05_14435;Dbxref=NCBI_GP:MCP9538719.1;Name=MCP9538719.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801794.1;locus_tag=NND05_14435;product=conjugative transposon protein TraJ;protein_id=MCP9538719.1;transl_table=11 JANDXE010000044.1 Genbank gene 8128 8751 . + . ID=gene-NND05_14440;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=NND05_14440 JANDXE010000044.1 Protein Homology CDS 8128 8751 . + 0 ID=cds-MCP9538720.1;Parent=gene-NND05_14440;Dbxref=NCBI_GP:MCP9538720.1;Name=MCP9538720.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667416.1;locus_tag=NND05_14440;product=conjugative transposon protein TraK;protein_id=MCP9538720.1;transl_table=11 JANDXE010000044.1 Genbank gene 8763 9053 . + . ID=gene-NND05_14445;Name=NND05_14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14445 JANDXE010000044.1 Protein Homology CDS 8763 9053 . + 0 ID=cds-MCP9538721.1;Parent=gene-NND05_14445;Dbxref=NCBI_GP:MCP9538721.1;Name=MCP9538721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004292824.1;locus_tag=NND05_14445;product=TraL conjugative transposon family protein;protein_id=MCP9538721.1;transl_table=11 JANDXE010000044.1 Genbank gene 9034 10377 . + . ID=gene-NND05_14450;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=NND05_14450 JANDXE010000044.1 Protein Homology CDS 9034 10377 . + 0 ID=cds-MCP9538722.1;Parent=gene-NND05_14450;Dbxref=NCBI_GP:MCP9538722.1;Name=MCP9538722.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796918.1;locus_tag=NND05_14450;product=conjugative transposon protein TraM;protein_id=MCP9538722.1;transl_table=11 JANDXE010000044.1 Genbank gene 10437 11465 . + . ID=gene-NND05_14455;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=NND05_14455 JANDXE010000044.1 Protein Homology CDS 10437 11465 . + 0 ID=cds-MCP9538723.1;Parent=gene-NND05_14455;Dbxref=NCBI_GP:MCP9538723.1;Name=MCP9538723.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017141286.1;locus_tag=NND05_14455;product=conjugative transposon protein TraN;protein_id=MCP9538723.1;transl_table=11 JANDXE010000044.1 Genbank gene 11469 12050 . + . ID=gene-NND05_14460;Name=NND05_14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14460 JANDXE010000044.1 Protein Homology CDS 11469 12050 . + 0 ID=cds-MCP9538724.1;Parent=gene-NND05_14460;Dbxref=NCBI_GP:MCP9538724.1;Name=MCP9538724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008764729.1;locus_tag=NND05_14460;product=conjugal transfer protein TraO;protein_id=MCP9538724.1;transl_table=11 JANDXE010000044.1 Genbank gene 12063 12932 . + . ID=gene-NND05_14465;Name=NND05_14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14465 JANDXE010000044.1 Protein Homology CDS 12063 12932 . + 0 ID=cds-MCP9538725.1;Parent=gene-NND05_14465;Dbxref=NCBI_GP:MCP9538725.1;Name=MCP9538725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005642455.1;locus_tag=NND05_14465;product=toprim domain-containing protein;protein_id=MCP9538725.1;transl_table=11 JANDXE010000044.1 Genbank gene 12957 13439 . + . ID=gene-NND05_14470;Name=NND05_14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14470 JANDXE010000044.1 Protein Homology CDS 12957 13439 . + 0 ID=cds-MCP9538726.1;Parent=gene-NND05_14470;Dbxref=NCBI_GP:MCP9538726.1;Name=MCP9538726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009121393.1;locus_tag=NND05_14470;product=DUF3872 domain-containing protein;protein_id=MCP9538726.1;transl_table=11 JANDXE010000044.1 Genbank gene 13436 13921 . + . ID=gene-NND05_14475;Name=NND05_14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14475 JANDXE010000044.1 Protein Homology CDS 13436 13921 . + 0 ID=cds-MCP9538727.1;Parent=gene-NND05_14475;Dbxref=NCBI_GP:MCP9538727.1;Name=MCP9538727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360061.1;locus_tag=NND05_14475;product=glycoside hydrolase;protein_id=MCP9538727.1;transl_table=11 JANDXE010000044.1 Genbank gene 14088 15365 . - . ID=gene-NND05_14480;Name=NND05_14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14480 JANDXE010000044.1 Protein Homology CDS 14088 15365 . - 0 ID=cds-MCP9538728.1;Parent=gene-NND05_14480;Dbxref=NCBI_GP:MCP9538728.1;Name=MCP9538728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823738.1;locus_tag=NND05_14480;product=PcfJ domain-containing protein;protein_id=MCP9538728.1;transl_table=11 JANDXE010000044.1 Genbank gene 15362 15787 . - . ID=gene-NND05_14485;Name=NND05_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14485 JANDXE010000044.1 Protein Homology CDS 15362 15787 . - 0 ID=cds-MCP9538729.1;Parent=gene-NND05_14485;Dbxref=NCBI_GP:MCP9538729.1;Name=MCP9538729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312216.1;locus_tag=NND05_14485;product=PcfK-like family protein;protein_id=MCP9538729.1;transl_table=11 JANDXE010000044.1 Genbank gene 15811 16050 . - . ID=gene-NND05_14490;Name=NND05_14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14490 JANDXE010000044.1 Protein Homology CDS 15811 16050 . - 0 ID=cds-MCP9538730.1;Parent=gene-NND05_14490;Dbxref=NCBI_GP:MCP9538730.1;Name=MCP9538730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823735.1;locus_tag=NND05_14490;product=hypothetical protein;protein_id=MCP9538730.1;transl_table=11 JANDXE010000044.1 Genbank gene 16063 16278 . - . ID=gene-NND05_14495;Name=NND05_14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14495 JANDXE010000044.1 Protein Homology CDS 16063 16278 . - 0 ID=cds-MCP9538731.1;Parent=gene-NND05_14495;Dbxref=NCBI_GP:MCP9538731.1;Name=MCP9538731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312215.1;locus_tag=NND05_14495;product=hypothetical protein;protein_id=MCP9538731.1;transl_table=11 JANDXE010000044.1 Genbank gene 17786 17968 . + . ID=gene-NND05_14500;Name=NND05_14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14500 JANDXE010000044.1 GeneMarkS-2+ CDS 17786 17968 . + 0 ID=cds-MCP9538732.1;Parent=gene-NND05_14500;Dbxref=NCBI_GP:MCP9538732.1;Name=MCP9538732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14500;product=hypothetical protein;protein_id=MCP9538732.1;transl_table=11 JANDXE010000044.1 Genbank gene 18651 19133 . + . ID=gene-NND05_14505;Name=NND05_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14505 JANDXE010000044.1 GeneMarkS-2+ CDS 18651 19133 . + 0 ID=cds-MCP9538733.1;Parent=gene-NND05_14505;Dbxref=NCBI_GP:MCP9538733.1;Name=MCP9538733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14505;product=energy transducer TonB;protein_id=MCP9538733.1;transl_table=11 ##sequence-region JANDXE010000045.1 1 5471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000045.1 Genbank region 1 5471 . + . ID=JANDXE010000045.1:1..5471;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000045.1 Genbank gene 76 216 . + . ID=gene-NND05_14510;Name=NND05_14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14510 JANDXE010000045.1 GeneMarkS-2+ CDS 76 216 . + 0 ID=cds-MCP9538734.1;Parent=gene-NND05_14510;Dbxref=NCBI_GP:MCP9538734.1;Name=MCP9538734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14510;product=hypothetical protein;protein_id=MCP9538734.1;transl_table=11 JANDXE010000045.1 Genbank gene 764 1912 . - . ID=gene-NND05_14515;Name=NND05_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14515 JANDXE010000045.1 GeneMarkS-2+ CDS 764 1912 . - 0 ID=cds-MCP9538735.1;Parent=gene-NND05_14515;Dbxref=NCBI_GP:MCP9538735.1;Name=MCP9538735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14515;product=hypothetical protein;protein_id=MCP9538735.1;transl_table=11 JANDXE010000045.1 Genbank pseudogene 2354 2610 . + . ID=gene-NND05_14520;Name=NND05_14520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14520;pseudo=true JANDXE010000045.1 Protein Homology CDS 2354 2610 . + 0 ID=cds-NND05_14520;Parent=gene-NND05_14520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008766853.1;locus_tag=NND05_14520;product=ORF6N domain-containing protein;pseudo=true;transl_table=11 JANDXE010000045.1 Genbank gene 2652 3680 . + . ID=gene-NND05_14525;Name=NND05_14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14525 JANDXE010000045.1 GeneMarkS-2+ CDS 2652 3680 . + 0 ID=cds-MCP9538736.1;Parent=gene-NND05_14525;Dbxref=NCBI_GP:MCP9538736.1;Name=MCP9538736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14525;product=hypothetical protein;protein_id=MCP9538736.1;transl_table=11 JANDXE010000045.1 Genbank gene 3930 4364 . + . ID=gene-NND05_14530;Name=NND05_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14530 JANDXE010000045.1 GeneMarkS-2+ CDS 3930 4364 . + 0 ID=cds-MCP9538737.1;Parent=gene-NND05_14530;Dbxref=NCBI_GP:MCP9538737.1;Name=MCP9538737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14530;product=hypothetical protein;protein_id=MCP9538737.1;transl_table=11 JANDXE010000045.1 Genbank gene 5073 5225 . - . ID=gene-NND05_14535;Name=NND05_14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14535 JANDXE010000045.1 GeneMarkS-2+ CDS 5073 5225 . - 0 ID=cds-MCP9538738.1;Parent=gene-NND05_14535;Dbxref=NCBI_GP:MCP9538738.1;Name=MCP9538738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14535;product=hypothetical protein;protein_id=MCP9538738.1;transl_table=11 ##sequence-region JANDXE010000046.1 1 10610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000046.1 Genbank region 1 10610 . + . ID=JANDXE010000046.1:1..10610;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000046.1 Genbank gene 1 424 . + . ID=gene-NND05_14540;Name=NND05_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14540;partial=true;start_range=.,1 JANDXE010000046.1 Protein Homology CDS 1 424 . + 1 ID=cds-MCP9538739.1;Parent=gene-NND05_14540;Dbxref=NCBI_GP:MCP9538739.1;Name=MCP9538739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173560.1;locus_tag=NND05_14540;partial=true;product=hypothetical protein;protein_id=MCP9538739.1;start_range=.,1;transl_table=11 JANDXE010000046.1 Genbank gene 625 1005 . + . ID=gene-NND05_14545;Name=NND05_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14545 JANDXE010000046.1 GeneMarkS-2+ CDS 625 1005 . + 0 ID=cds-MCP9538740.1;Parent=gene-NND05_14545;Dbxref=NCBI_GP:MCP9538740.1;Name=MCP9538740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14545;product=hypothetical protein;protein_id=MCP9538740.1;transl_table=11 JANDXE010000046.1 Genbank gene 1439 2653 . + . ID=gene-NND05_14550;Name=NND05_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14550 JANDXE010000046.1 Protein Homology CDS 1439 2653 . + 0 ID=cds-MCP9538741.1;Parent=gene-NND05_14550;Dbxref=NCBI_GP:MCP9538741.1;Name=MCP9538741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022018.2;locus_tag=NND05_14550;product=ORF6N domain-containing protein;protein_id=MCP9538741.1;transl_table=11 JANDXE010000046.1 Genbank gene 2909 3829 . + . ID=gene-NND05_14555;Name=NND05_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14555 JANDXE010000046.1 GeneMarkS-2+ CDS 2909 3829 . + 0 ID=cds-MCP9538742.1;Parent=gene-NND05_14555;Dbxref=NCBI_GP:MCP9538742.1;Name=MCP9538742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14555;product=hypothetical protein;protein_id=MCP9538742.1;transl_table=11 JANDXE010000046.1 Genbank pseudogene 4141 4297 . + . ID=gene-NND05_14560;Name=NND05_14560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14560;pseudo=true JANDXE010000046.1 Protein Homology CDS 4141 4297 . + 0 ID=cds-NND05_14560;Parent=gene-NND05_14560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007659510.1;locus_tag=NND05_14560;product=DNA resolvase;pseudo=true;transl_table=11 JANDXE010000046.1 Genbank gene 4455 4943 . + . ID=gene-NND05_14565;Name=NND05_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14565 JANDXE010000046.1 Protein Homology CDS 4455 4943 . + 0 ID=cds-MCP9538743.1;Parent=gene-NND05_14565;Dbxref=NCBI_GP:MCP9538743.1;Name=MCP9538743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022018.2;locus_tag=NND05_14565;product=ORF6N domain-containing protein;protein_id=MCP9538743.1;transl_table=11 JANDXE010000046.1 Genbank gene 5005 6036 . + . ID=gene-NND05_14570;Name=NND05_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14570 JANDXE010000046.1 GeneMarkS-2+ CDS 5005 6036 . + 0 ID=cds-MCP9538744.1;Parent=gene-NND05_14570;Dbxref=NCBI_GP:MCP9538744.1;Name=MCP9538744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14570;product=hypothetical protein;protein_id=MCP9538744.1;transl_table=11 JANDXE010000046.1 Genbank gene 6331 7401 . - . ID=gene-NND05_14575;Name=NND05_14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14575 JANDXE010000046.1 Protein Homology CDS 6331 7401 . - 0 ID=cds-MCP9538745.1;Parent=gene-NND05_14575;Dbxref=NCBI_GP:MCP9538745.1;Name=MCP9538745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005795753.1;locus_tag=NND05_14575;product=DUF6371 domain-containing protein;protein_id=MCP9538745.1;transl_table=11 JANDXE010000046.1 Genbank gene 7497 8891 . - . ID=gene-NND05_14580;Name=NND05_14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14580 JANDXE010000046.1 Protein Homology CDS 7497 8891 . - 0 ID=cds-MCP9538746.1;Parent=gene-NND05_14580;Dbxref=NCBI_GP:MCP9538746.1;Name=MCP9538746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008622563.1;locus_tag=NND05_14580;product=YfjI family protein;protein_id=MCP9538746.1;transl_table=11 JANDXE010000046.1 Genbank gene 8903 9271 . - . ID=gene-NND05_14585;Name=NND05_14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14585 JANDXE010000046.1 Protein Homology CDS 8903 9271 . - 0 ID=cds-MCP9538747.1;Parent=gene-NND05_14585;Dbxref=NCBI_GP:MCP9538747.1;Name=MCP9538747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665790.1;locus_tag=NND05_14585;product=helix-turn-helix domain-containing protein;protein_id=MCP9538747.1;transl_table=11 JANDXE010000046.1 Genbank gene 9371 10165 . - . ID=gene-NND05_14590;Name=NND05_14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14590 JANDXE010000046.1 GeneMarkS-2+ CDS 9371 10165 . - 0 ID=cds-MCP9538748.1;Parent=gene-NND05_14590;Dbxref=NCBI_GP:MCP9538748.1;Name=MCP9538748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14590;product=hypothetical protein;protein_id=MCP9538748.1;transl_table=11 JANDXE010000046.1 Genbank pseudogene 10329 10493 . - . ID=gene-NND05_14595;Name=NND05_14595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14595;pseudo=true JANDXE010000046.1 Protein Homology CDS 10329 10493 . - 0 ID=cds-NND05_14595;Parent=gene-NND05_14595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966703.1;locus_tag=NND05_14595;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 ##sequence-region JANDXE010000047.1 1 14084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000047.1 Genbank region 1 14084 . + . ID=JANDXE010000047.1:1..14084;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000047.1 Genbank gene 1 703 . + . ID=gene-NND05_14600;Name=NND05_14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14600;partial=true;start_range=.,1 JANDXE010000047.1 GeneMarkS-2+ CDS 1 703 . + 1 ID=cds-MCP9538749.1;Parent=gene-NND05_14600;Dbxref=NCBI_GP:MCP9538749.1;Name=MCP9538749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14600;partial=true;product=DUF3945 domain-containing protein;protein_id=MCP9538749.1;start_range=.,1;transl_table=11 JANDXE010000047.1 Genbank gene 802 2958 . + . ID=gene-NND05_14605;Name=NND05_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14605 JANDXE010000047.1 Protein Homology CDS 802 2958 . + 0 ID=cds-MCP9538750.1;Parent=gene-NND05_14605;Dbxref=NCBI_GP:MCP9538750.1;Name=MCP9538750.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007566594.1;locus_tag=NND05_14605;product=DNA topoisomerase;protein_id=MCP9538750.1;transl_table=11 JANDXE010000047.1 Genbank gene 3139 3588 . + . ID=gene-NND05_14610;Name=NND05_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14610 JANDXE010000047.1 Protein Homology CDS 3139 3588 . + 0 ID=cds-MCP9538751.1;Parent=gene-NND05_14610;Dbxref=NCBI_GP:MCP9538751.1;Name=MCP9538751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002561000.1;locus_tag=NND05_14610;product=DUF1896 domain-containing protein;protein_id=MCP9538751.1;transl_table=11 JANDXE010000047.1 Genbank gene 3575 8347 . + . ID=gene-NND05_14615;Name=NND05_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14615 JANDXE010000047.1 Protein Homology CDS 3575 8347 . + 0 ID=cds-MCP9538752.1;Parent=gene-NND05_14615;Dbxref=NCBI_GP:MCP9538752.1;Name=MCP9538752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371703.1;locus_tag=NND05_14615;product=DNA methylase;protein_id=MCP9538752.1;transl_table=11 JANDXE010000047.1 Genbank gene 9004 10689 . + . ID=gene-NND05_14620;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=NND05_14620 JANDXE010000047.1 Protein Homology CDS 9004 10689 . + 0 ID=cds-MCP9538753.1;Parent=gene-NND05_14620;Dbxref=NCBI_GP:MCP9538753.1;Name=MCP9538753.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008651069.1;locus_tag=NND05_14620;product=group II intron reverse transcriptase/maturase;protein_id=MCP9538753.1;transl_table=11 JANDXE010000047.1 Genbank gene 10673 11866 . + . ID=gene-NND05_14625;Name=NND05_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14625 JANDXE010000047.1 Protein Homology CDS 10673 11866 . + 0 ID=cds-MCP9538754.1;Parent=gene-NND05_14625;Dbxref=NCBI_GP:MCP9538754.1;Name=MCP9538754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004324012.1;locus_tag=NND05_14625;product=DNA methylase;protein_id=MCP9538754.1;transl_table=11 JANDXE010000047.1 Genbank gene 12626 13354 . + . ID=gene-NND05_14630;Name=NND05_14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14630 JANDXE010000047.1 Protein Homology CDS 12626 13354 . + 0 ID=cds-MCP9538755.1;Parent=gene-NND05_14630;Dbxref=NCBI_GP:MCP9538755.1;Name=MCP9538755.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312234.1;locus_tag=NND05_14630;product=UpxY family transcription antiterminator;protein_id=MCP9538755.1;transl_table=11 JANDXE010000047.1 Genbank pseudogene 13372 13956 . + . ID=gene-NND05_14635;Name=NND05_14635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14635;pseudo=true JANDXE010000047.1 Protein Homology CDS 13372 13956 . + 0 ID=cds-NND05_14635;Parent=gene-NND05_14635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920766.1;locus_tag=NND05_14635;product=SDR family oxidoreductase;pseudo=true;transl_table=11 ##sequence-region JANDXE010000048.1 1 10003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000048.1 Genbank region 1 10003 . + . ID=JANDXE010000048.1:1..10003;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000048.1 Genbank gene 1 1302 . + . ID=gene-NND05_14640;Name=NND05_14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14640;partial=true;start_range=.,1 JANDXE010000048.1 Protein Homology CDS 1 1302 . + 0 ID=cds-MCP9538756.1;Parent=gene-NND05_14640;Dbxref=NCBI_GP:MCP9538756.1;Name=MCP9538756.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_14640;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=MCP9538756.1;start_range=.,1;transl_table=11 JANDXE010000048.1 Genbank gene 1299 2615 . + . ID=gene-NND05_14645;Name=NND05_14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14645 JANDXE010000048.1 Protein Homology CDS 1299 2615 . + 0 ID=cds-MCP9538757.1;Parent=gene-NND05_14645;Dbxref=NCBI_GP:MCP9538757.1;Name=MCP9538757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=NND05_14645;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9538757.1;transl_table=11 JANDXE010000048.1 Genbank gene 2846 3475 . + . ID=gene-NND05_14650;Name=NND05_14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14650 JANDXE010000048.1 Protein Homology CDS 2846 3475 . + 0 ID=cds-MCP9538758.1;Parent=gene-NND05_14650;Dbxref=NCBI_GP:MCP9538758.1;Name=MCP9538758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861685.1;locus_tag=NND05_14650;product=RteC domain-containing protein;protein_id=MCP9538758.1;transl_table=11 JANDXE010000048.1 Genbank pseudogene 3553 4848 . - . ID=gene-NND05_14655;Name=NND05_14655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14655;pseudo=true JANDXE010000048.1 Protein Homology CDS 3553 4848 . - 0 ID=cds-NND05_14655;Parent=gene-NND05_14655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002560990.1;locus_tag=NND05_14655;product=TraM recognition domain-containing protein;pseudo=true;transl_table=11 JANDXE010000048.1 Genbank gene 4964 6775 . - . ID=gene-NND05_14660;Name=NND05_14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14660 JANDXE010000048.1 Protein Homology CDS 4964 6775 . - 0 ID=cds-MCP9538759.1;Parent=gene-NND05_14660;Dbxref=NCBI_GP:MCP9538759.1;Name=MCP9538759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004318718.1;locus_tag=NND05_14660;product=reverse transcriptase domain-containing protein;protein_id=MCP9538759.1;transl_table=11 JANDXE010000048.1 Genbank pseudogene 7346 8050 . - . ID=gene-NND05_14665;Name=NND05_14665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14665;pseudo=true JANDXE010000048.1 Protein Homology CDS 7346 8050 . - 0 ID=cds-NND05_14665;Parent=gene-NND05_14665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796942.1;locus_tag=NND05_14665;product=YWFCY domain-containing protein;pseudo=true;transl_table=11 JANDXE010000048.1 Genbank gene 8138 9391 . - . ID=gene-NND05_14670;Name=NND05_14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14670 JANDXE010000048.1 Protein Homology CDS 8138 9391 . - 0 ID=cds-MCP9538760.1;Parent=gene-NND05_14670;Dbxref=NCBI_GP:MCP9538760.1;Name=MCP9538760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007856124.1;locus_tag=NND05_14670;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MCP9538760.1;transl_table=11 JANDXE010000048.1 Genbank gene 9376 9795 . - . ID=gene-NND05_14675;Name=NND05_14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14675 JANDXE010000048.1 Protein Homology CDS 9376 9795 . - 0 ID=cds-MCP9538761.1;Parent=gene-NND05_14675;Dbxref=NCBI_GP:MCP9538761.1;Name=MCP9538761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008151302.1;locus_tag=NND05_14675;product=hypothetical protein;protein_id=MCP9538761.1;transl_table=11 ##sequence-region JANDXE010000049.1 1 9818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000049.1 Genbank region 1 9818 . + . ID=JANDXE010000049.1:1..9818;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000049.1 Genbank gene 1 575 . + . ID=gene-NND05_14680;Name=NND05_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14680;partial=true;start_range=.,1 JANDXE010000049.1 Protein Homology CDS 1 575 . + 2 ID=cds-MCP9538762.1;Parent=gene-NND05_14680;Dbxref=NCBI_GP:MCP9538762.1;Name=MCP9538762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028454.2;locus_tag=NND05_14680;partial=true;product=DUF5119 domain-containing protein;protein_id=MCP9538762.1;start_range=.,1;transl_table=11 JANDXE010000049.1 Genbank gene 686 1900 . + . ID=gene-NND05_14685;Name=NND05_14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14685 JANDXE010000049.1 Protein Homology CDS 686 1900 . + 0 ID=cds-MCP9538763.1;Parent=gene-NND05_14685;Dbxref=NCBI_GP:MCP9538763.1;Name=MCP9538763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14685;product=fimbrillin family protein;protein_id=MCP9538763.1;transl_table=11 JANDXE010000049.1 Genbank gene 2165 4168 . + . ID=gene-NND05_14690;Name=NND05_14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14690 JANDXE010000049.1 Protein Homology CDS 2165 4168 . + 0 ID=cds-MCP9538764.1;Parent=gene-NND05_14690;Dbxref=NCBI_GP:MCP9538764.1;Name=MCP9538764.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14690;product=fimbrillin family protein;protein_id=MCP9538764.1;transl_table=11 JANDXE010000049.1 Genbank gene 5193 5597 . + . ID=gene-NND05_14695;Name=NND05_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14695 JANDXE010000049.1 Protein Homology CDS 5193 5597 . + 0 ID=cds-MCP9538765.1;Parent=gene-NND05_14695;Dbxref=NCBI_GP:MCP9538765.1;Name=MCP9538765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017375.1;locus_tag=NND05_14695;product=PepSY-like domain-containing protein;protein_id=MCP9538765.1;transl_table=11 JANDXE010000049.1 Genbank gene 5707 5958 . - . ID=gene-NND05_14700;Name=NND05_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14700 JANDXE010000049.1 GeneMarkS-2+ CDS 5707 5958 . - 0 ID=cds-MCP9538766.1;Parent=gene-NND05_14700;Dbxref=NCBI_GP:MCP9538766.1;Name=MCP9538766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14700;product=hypothetical protein;protein_id=MCP9538766.1;transl_table=11 JANDXE010000049.1 Genbank gene 6152 7012 . - . ID=gene-NND05_14705;Name=NND05_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14705 JANDXE010000049.1 Protein Homology CDS 6152 7012 . - 0 ID=cds-MCP9538767.1;Parent=gene-NND05_14705;Dbxref=NCBI_GP:MCP9538767.1;Name=MCP9538767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846246.1;locus_tag=NND05_14705;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9538767.1;transl_table=11 JANDXE010000049.1 Genbank gene 7194 8276 . - . ID=gene-NND05_14710;Name=NND05_14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14710 JANDXE010000049.1 GeneMarkS-2+ CDS 7194 8276 . - 0 ID=cds-MCP9538768.1;Parent=gene-NND05_14710;Dbxref=NCBI_GP:MCP9538768.1;Name=MCP9538768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14710;product=hypothetical protein;protein_id=MCP9538768.1;transl_table=11 JANDXE010000049.1 Genbank gene 9068 9508 . + . ID=gene-NND05_14715;Name=NND05_14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14715 JANDXE010000049.1 Protein Homology CDS 9068 9508 . + 0 ID=cds-MCP9538769.1;Parent=gene-NND05_14715;Dbxref=NCBI_GP:MCP9538769.1;Name=MCP9538769.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004321221.1;locus_tag=NND05_14715;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9538769.1;transl_table=11 JANDXE010000049.1 Genbank gene 9592 9818 . + . ID=gene-NND05_14720;Name=NND05_14720;end_range=9818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14720;partial=true JANDXE010000049.1 Protein Homology CDS 9592 9818 . + 0 ID=cds-MCP9538770.1;Parent=gene-NND05_14720;Dbxref=NCBI_GP:MCP9538770.1;Name=MCP9538770.1;end_range=9818,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_14720;partial=true;product=DUF4248 domain-containing protein;protein_id=MCP9538770.1;transl_table=11 ##sequence-region JANDXE010000050.1 1 8942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000050.1 Genbank region 1 8942 . + . ID=JANDXE010000050.1:1..8942;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000050.1 Genbank gene 161 1867 . - . ID=gene-NND05_14725;Name=NND05_14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14725 JANDXE010000050.1 Protein Homology CDS 161 1867 . - 0 ID=cds-MCP9538771.1;Parent=gene-NND05_14725;Dbxref=NCBI_GP:MCP9538771.1;Name=MCP9538771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849107.1;locus_tag=NND05_14725;product=hypothetical protein;protein_id=MCP9538771.1;transl_table=11 JANDXE010000050.1 Genbank gene 2244 2510 . - . ID=gene-NND05_14730;Name=NND05_14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14730 JANDXE010000050.1 GeneMarkS-2+ CDS 2244 2510 . - 0 ID=cds-MCP9538772.1;Parent=gene-NND05_14730;Dbxref=NCBI_GP:MCP9538772.1;Name=MCP9538772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14730;product=hypothetical protein;protein_id=MCP9538772.1;transl_table=11 JANDXE010000050.1 Genbank gene 3162 3779 . + . ID=gene-NND05_14735;Name=NND05_14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14735 JANDXE010000050.1 GeneMarkS-2+ CDS 3162 3779 . + 0 ID=cds-MCP9538773.1;Parent=gene-NND05_14735;Dbxref=NCBI_GP:MCP9538773.1;Name=MCP9538773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14735;product=hypothetical protein;protein_id=MCP9538773.1;transl_table=11 JANDXE010000050.1 Genbank gene 4164 4781 . + . ID=gene-NND05_14740;Name=NND05_14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14740 JANDXE010000050.1 Protein Homology CDS 4164 4781 . + 0 ID=cds-MCP9538774.1;Parent=gene-NND05_14740;Dbxref=NCBI_GP:MCP9538774.1;Name=MCP9538774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017157.2;locus_tag=NND05_14740;product=hypothetical protein;protein_id=MCP9538774.1;transl_table=11 JANDXE010000050.1 Genbank gene 4788 5429 . + . ID=gene-NND05_14745;Name=NND05_14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14745 JANDXE010000050.1 Protein Homology CDS 4788 5429 . + 0 ID=cds-MCP9538775.1;Parent=gene-NND05_14745;Dbxref=NCBI_GP:MCP9538775.1;Name=MCP9538775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017157.2;locus_tag=NND05_14745;product=hypothetical protein;protein_id=MCP9538775.1;transl_table=11 JANDXE010000050.1 Genbank gene 5573 6352 . + . ID=gene-NND05_14750;Name=NND05_14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14750 JANDXE010000050.1 Protein Homology CDS 5573 6352 . + 0 ID=cds-MCP9538776.1;Parent=gene-NND05_14750;Dbxref=NCBI_GP:MCP9538776.1;Name=MCP9538776.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NND05_14750;product=DNA methyltransferase;protein_id=MCP9538776.1;transl_table=11 JANDXE010000050.1 Genbank gene 6358 7674 . + . ID=gene-NND05_14755;Name=NND05_14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14755 JANDXE010000050.1 Protein Homology CDS 6358 7674 . + 0 ID=cds-MCP9538777.1;Parent=gene-NND05_14755;Dbxref=NCBI_GP:MCP9538777.1;Name=MCP9538777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=NND05_14755;product=DNA cytosine methyltransferase;protein_id=MCP9538777.1;transl_table=11 JANDXE010000050.1 Genbank gene 7967 8110 . - . ID=gene-NND05_14760;Name=NND05_14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14760 JANDXE010000050.1 GeneMarkS-2+ CDS 7967 8110 . - 0 ID=cds-MCP9538778.1;Parent=gene-NND05_14760;Dbxref=NCBI_GP:MCP9538778.1;Name=MCP9538778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14760;product=hypothetical protein;protein_id=MCP9538778.1;transl_table=11 JANDXE010000050.1 Genbank gene 8291 8521 . - . ID=gene-NND05_14765;Name=NND05_14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14765 JANDXE010000050.1 GeneMarkS-2+ CDS 8291 8521 . - 0 ID=cds-MCP9538779.1;Parent=gene-NND05_14765;Dbxref=NCBI_GP:MCP9538779.1;Name=MCP9538779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14765;product=hypothetical protein;protein_id=MCP9538779.1;transl_table=11 ##sequence-region JANDXE010000051.1 1 7572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000051.1 Genbank region 1 7572 . + . ID=JANDXE010000051.1:1..7572;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000051.1 Genbank pseudogene 424 867 . + . ID=gene-NND05_14770;Name=NND05_14770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14770;pseudo=true JANDXE010000051.1 Protein Homology CDS 424 867 . + 0 ID=cds-NND05_14770;Parent=gene-NND05_14770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967711.1;locus_tag=NND05_14770;product=dehydrogenase;pseudo=true;transl_table=11 JANDXE010000051.1 Genbank gene 1023 1811 . + . ID=gene-NND05_14775;Name=NND05_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14775 JANDXE010000051.1 GeneMarkS-2+ CDS 1023 1811 . + 0 ID=cds-MCP9538780.1;Parent=gene-NND05_14775;Dbxref=NCBI_GP:MCP9538780.1;Name=MCP9538780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14775;product=hypothetical protein;protein_id=MCP9538780.1;transl_table=11 JANDXE010000051.1 Genbank gene 2131 2928 . + . ID=gene-NND05_14780;Name=NND05_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14780 JANDXE010000051.1 Protein Homology CDS 2131 2928 . + 0 ID=cds-MCP9538781.1;Parent=gene-NND05_14780;Dbxref=NCBI_GP:MCP9538781.1;Name=MCP9538781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015506.2;locus_tag=NND05_14780;product=energy transducer TonB;protein_id=MCP9538781.1;transl_table=11 JANDXE010000051.1 Genbank gene 2948 3952 . + . ID=gene-NND05_14785;Name=NND05_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14785 JANDXE010000051.1 Protein Homology CDS 2948 3952 . + 0 ID=cds-MCP9538782.1;Parent=gene-NND05_14785;Dbxref=NCBI_GP:MCP9538782.1;Name=MCP9538782.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337703.1;locus_tag=NND05_14785;product=TonB family protein;protein_id=MCP9538782.1;transl_table=11 JANDXE010000051.1 Genbank gene 3954 4574 . + . ID=gene-NND05_14790;Name=NND05_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14790 JANDXE010000051.1 Protein Homology CDS 3954 4574 . + 0 ID=cds-MCP9538783.1;Parent=gene-NND05_14790;Dbxref=NCBI_GP:MCP9538783.1;Name=MCP9538783.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004382695.1;locus_tag=NND05_14790;product=radical SAM protein;protein_id=MCP9538783.1;transl_table=11 JANDXE010000051.1 Genbank gene 4648 5397 . - . ID=gene-NND05_14795;Name=NND05_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14795 JANDXE010000051.1 Protein Homology CDS 4648 5397 . - 0 ID=cds-MCP9538784.1;Parent=gene-NND05_14795;Dbxref=NCBI_GP:MCP9538784.1;Name=MCP9538784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055852.1;locus_tag=NND05_14795;product=hypothetical protein;protein_id=MCP9538784.1;transl_table=11 JANDXE010000051.1 Genbank gene 5438 6388 . - . ID=gene-NND05_14800;Name=NND05_14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14800 JANDXE010000051.1 Protein Homology CDS 5438 6388 . - 0 ID=cds-MCP9538785.1;Parent=gene-NND05_14800;Dbxref=NCBI_GP:MCP9538785.1;Name=MCP9538785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656563.1;locus_tag=NND05_14800;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MCP9538785.1;transl_table=11 JANDXE010000051.1 Genbank gene 6385 6798 . - . ID=gene-NND05_14805;Name=NND05_14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14805 JANDXE010000051.1 Protein Homology CDS 6385 6798 . - 0 ID=cds-MCP9538786.1;Parent=gene-NND05_14805;Dbxref=NCBI_GP:MCP9538786.1;Name=MCP9538786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628605.1;locus_tag=NND05_14805;product=MobC family plasmid mobilization relaxosome protein;protein_id=MCP9538786.1;transl_table=11 JANDXE010000051.1 Genbank gene 6983 7462 . - . ID=gene-NND05_14810;Name=NND05_14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14810 JANDXE010000051.1 Protein Homology CDS 6983 7462 . - 0 ID=cds-MCP9538787.1;Parent=gene-NND05_14810;Dbxref=NCBI_GP:MCP9538787.1;Name=MCP9538787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_14810;product=DUF3408 domain-containing protein;protein_id=MCP9538787.1;transl_table=11 ##sequence-region JANDXE010000004.1 1 204489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000004.1 Genbank region 1 204489 . + . ID=JANDXE010000004.1:1..204489;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000004.1 Genbank gene 1 380 . - . ID=gene-NND05_03175;Name=NND05_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03175;partial=true;start_range=.,1 JANDXE010000004.1 Protein Homology CDS 1 380 . - 0 ID=cds-MCP9536566.1;Parent=gene-NND05_03175;Dbxref=NCBI_GP:MCP9536566.1;Name=MCP9536566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015532459.1;locus_tag=NND05_03175;partial=true;product=Arm DNA-binding domain-containing protein;protein_id=MCP9536566.1;start_range=.,1;transl_table=11 JANDXE010000004.1 Genbank gene 806 1651 . + . ID=gene-NND05_03180;Name=NND05_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03180 JANDXE010000004.1 Protein Homology CDS 806 1651 . + 0 ID=cds-MCP9536567.1;Parent=gene-NND05_03180;Dbxref=NCBI_GP:MCP9536567.1;Name=MCP9536567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=NND05_03180;product=DUF4143 domain-containing protein;protein_id=MCP9536567.1;transl_table=11 JANDXE010000004.1 Genbank gene 1894 3150 . - . ID=gene-NND05_03185;Name=NND05_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03185 JANDXE010000004.1 Protein Homology CDS 1894 3150 . - 0 ID=cds-MCP9536568.1;Parent=gene-NND05_03185;Dbxref=NCBI_GP:MCP9536568.1;Name=MCP9536568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007211851.1;locus_tag=NND05_03185;product=ATP-binding protein;protein_id=MCP9536568.1;transl_table=11 JANDXE010000004.1 Genbank gene 3581 4867 . + . ID=gene-NND05_03190;Name=NND05_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03190 JANDXE010000004.1 Protein Homology CDS 3581 4867 . + 0 ID=cds-MCP9536569.1;Parent=gene-NND05_03190;Dbxref=NCBI_GP:MCP9536569.1;Name=MCP9536569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848220.1;locus_tag=NND05_03190;product=ATP-binding protein;protein_id=MCP9536569.1;transl_table=11 JANDXE010000004.1 Genbank gene 5271 8486 . + . ID=gene-NND05_03195;Name=NND05_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03195 JANDXE010000004.1 Protein Homology CDS 5271 8486 . + 0 ID=cds-MCP9536570.1;Parent=gene-NND05_03195;Dbxref=NCBI_GP:MCP9536570.1;Name=MCP9536570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369329.1;locus_tag=NND05_03195;product=TonB-dependent receptor;protein_id=MCP9536570.1;transl_table=11 JANDXE010000004.1 Genbank gene 8512 10134 . + . ID=gene-NND05_03200;Name=NND05_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03200 JANDXE010000004.1 Protein Homology CDS 8512 10134 . + 0 ID=cds-MCP9536571.1;Parent=gene-NND05_03200;Dbxref=NCBI_GP:MCP9536571.1;Name=MCP9536571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967733.1;locus_tag=NND05_03200;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536571.1;transl_table=11 JANDXE010000004.1 Genbank gene 10170 10973 . + . ID=gene-NND05_03205;Name=NND05_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03205 JANDXE010000004.1 GeneMarkS-2+ CDS 10170 10973 . + 0 ID=cds-MCP9536572.1;Parent=gene-NND05_03205;Dbxref=NCBI_GP:MCP9536572.1;Name=MCP9536572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03205;product=hypothetical protein;protein_id=MCP9536572.1;transl_table=11 JANDXE010000004.1 Genbank gene 11035 12693 . + . ID=gene-NND05_03210;Name=NND05_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03210 JANDXE010000004.1 Protein Homology CDS 11035 12693 . + 0 ID=cds-MCP9536573.1;Parent=gene-NND05_03210;Dbxref=NCBI_GP:MCP9536573.1;Name=MCP9536573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016665476.1;locus_tag=NND05_03210;product=C10 family peptidase;protein_id=MCP9536573.1;transl_table=11 JANDXE010000004.1 Genbank gene 12868 14871 . - . ID=gene-NND05_03215;Name=NND05_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03215 JANDXE010000004.1 Protein Homology CDS 12868 14871 . - 0 ID=cds-MCP9536574.1;Parent=gene-NND05_03215;Dbxref=NCBI_GP:MCP9536574.1;Name=MCP9536574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344315.1;locus_tag=NND05_03215;product=alpha-glucuronidase;protein_id=MCP9536574.1;transl_table=11 JANDXE010000004.1 Genbank gene 14955 18875 . - . ID=gene-NND05_03220;Name=NND05_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03220 JANDXE010000004.1 Protein Homology CDS 14955 18875 . - 0 ID=cds-MCP9536575.1;Parent=gene-NND05_03220;Dbxref=NCBI_GP:MCP9536575.1;Name=MCP9536575.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847663.1;locus_tag=NND05_03220;product=response regulator;protein_id=MCP9536575.1;transl_table=11 JANDXE010000004.1 Genbank gene 19125 20327 . + . ID=gene-NND05_03225;Name=NND05_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03225 JANDXE010000004.1 Protein Homology CDS 19125 20327 . + 0 ID=cds-MCP9536576.1;Parent=gene-NND05_03225;Dbxref=NCBI_GP:MCP9536576.1;Name=MCP9536576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847662.1;locus_tag=NND05_03225;product=SGNH/GDSL hydrolase family protein;protein_id=MCP9536576.1;transl_table=11 JANDXE010000004.1 Genbank gene 20340 21743 . + . ID=gene-NND05_03230;Name=NND05_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03230 JANDXE010000004.1 Protein Homology CDS 20340 21743 . + 0 ID=cds-MCP9536577.1;Parent=gene-NND05_03230;Dbxref=NCBI_GP:MCP9536577.1;Name=MCP9536577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341606.1;locus_tag=NND05_03230;product=MFS transporter;protein_id=MCP9536577.1;transl_table=11 JANDXE010000004.1 Genbank gene 21808 22899 . + . ID=gene-NND05_03235;Name=NND05_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03235 JANDXE010000004.1 Protein Homology CDS 21808 22899 . + 0 ID=cds-MCP9536578.1;Parent=gene-NND05_03235;Dbxref=NCBI_GP:MCP9536578.1;Name=MCP9536578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847660.1;locus_tag=NND05_03235;product=endo-1%2C4-beta-xylanase;protein_id=MCP9536578.1;transl_table=11 JANDXE010000004.1 Genbank gene 22961 23917 . + . ID=gene-NND05_03240;Name=NND05_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03240 JANDXE010000004.1 Protein Homology CDS 22961 23917 . + 0 ID=cds-MCP9536579.1;Parent=gene-NND05_03240;Dbxref=NCBI_GP:MCP9536579.1;Name=MCP9536579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281621.1;locus_tag=NND05_03240;product=glycoside hydrolase family 43 protein;protein_id=MCP9536579.1;transl_table=11 JANDXE010000004.1 Genbank gene 24162 25559 . + . ID=gene-NND05_03245;Name=NND05_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03245 JANDXE010000004.1 Protein Homology CDS 24162 25559 . + 0 ID=cds-MCP9536580.1;Parent=gene-NND05_03245;Dbxref=NCBI_GP:MCP9536580.1;Name=MCP9536580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039827.1;locus_tag=NND05_03245;product=DUF5687 family protein;protein_id=MCP9536580.1;transl_table=11 JANDXE010000004.1 Genbank gene 25696 26403 . + . ID=gene-NND05_03250;Name=NND05_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03250 JANDXE010000004.1 Protein Homology CDS 25696 26403 . + 0 ID=cds-MCP9536581.1;Parent=gene-NND05_03250;Dbxref=NCBI_GP:MCP9536581.1;Name=MCP9536581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847657.1;locus_tag=NND05_03250;product=ABC transporter ATP-binding protein;protein_id=MCP9536581.1;transl_table=11 JANDXE010000004.1 Genbank gene 27321 28493 . + . ID=gene-NND05_03255;Name=NND05_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03255 JANDXE010000004.1 Protein Homology CDS 27321 28493 . + 0 ID=cds-MCP9536582.1;Parent=gene-NND05_03255;Dbxref=NCBI_GP:MCP9536582.1;Name=MCP9536582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848426.1;locus_tag=NND05_03255;product=AAA family ATPase;protein_id=MCP9536582.1;transl_table=11 JANDXE010000004.1 Genbank gene 28749 30950 . + . ID=gene-NND05_03260;Name=NND05_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03260 JANDXE010000004.1 Protein Homology CDS 28749 30950 . + 0 ID=cds-MCP9536583.1;Parent=gene-NND05_03260;Dbxref=NCBI_GP:MCP9536583.1;Name=MCP9536583.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_03260;product=outer membrane beta-barrel family protein;protein_id=MCP9536583.1;transl_table=11 JANDXE010000004.1 Genbank gene 31157 31987 . + . ID=gene-NND05_03265;Name=NND05_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03265 JANDXE010000004.1 Protein Homology CDS 31157 31987 . + 0 ID=cds-MCP9536584.1;Parent=gene-NND05_03265;Dbxref=NCBI_GP:MCP9536584.1;Name=MCP9536584.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01200.1;locus_tag=NND05_03265;product=GLPGLI family protein;protein_id=MCP9536584.1;transl_table=11 JANDXE010000004.1 Genbank gene 32015 32857 . + . ID=gene-NND05_03270;Name=NND05_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03270 JANDXE010000004.1 Protein Homology CDS 32015 32857 . + 0 ID=cds-MCP9536585.1;Parent=gene-NND05_03270;Dbxref=NCBI_GP:MCP9536585.1;Name=MCP9536585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01200.1;locus_tag=NND05_03270;product=GLPGLI family protein;protein_id=MCP9536585.1;transl_table=11 JANDXE010000004.1 Genbank gene 32905 35541 . + . ID=gene-NND05_03275;Name=NND05_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03275 JANDXE010000004.1 Protein Homology CDS 32905 35541 . + 0 ID=cds-MCP9536586.1;Parent=gene-NND05_03275;Dbxref=NCBI_GP:MCP9536586.1;Name=MCP9536586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025092.2;locus_tag=NND05_03275;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9536586.1;transl_table=11 JANDXE010000004.1 Genbank gene 35679 36449 . + . ID=gene-NND05_03280;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NND05_03280 JANDXE010000004.1 Protein Homology CDS 35679 36449 . + 0 ID=cds-MCP9536587.1;Parent=gene-NND05_03280;Dbxref=NCBI_GP:MCP9536587.1;Name=MCP9536587.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371414.1;locus_tag=NND05_03280;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=MCP9536587.1;transl_table=11 JANDXE010000004.1 Genbank gene 36710 37711 . - . ID=gene-NND05_03285;Name=NND05_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03285 JANDXE010000004.1 Protein Homology CDS 36710 37711 . - 0 ID=cds-MCP9536588.1;Parent=gene-NND05_03285;Dbxref=NCBI_GP:MCP9536588.1;Name=MCP9536588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847655.1;locus_tag=NND05_03285;product=virulence protein RhuM/Fic/DOC family protein;protein_id=MCP9536588.1;transl_table=11 JANDXE010000004.1 Genbank gene 38002 38895 . + . ID=gene-NND05_03290;Name=NND05_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03290 JANDXE010000004.1 Protein Homology CDS 38002 38895 . + 0 ID=cds-MCP9536589.1;Parent=gene-NND05_03290;Dbxref=NCBI_GP:MCP9536589.1;Name=MCP9536589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647042.1;locus_tag=NND05_03290;product=Fic family protein;protein_id=MCP9536589.1;transl_table=11 JANDXE010000004.1 Genbank gene 39131 41482 . + . ID=gene-NND05_03295;Name=NND05_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03295 JANDXE010000004.1 Protein Homology CDS 39131 41482 . + 0 ID=cds-MCP9536590.1;Parent=gene-NND05_03295;Dbxref=NCBI_GP:MCP9536590.1;Name=MCP9536590.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847652.1;locus_tag=NND05_03295;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=MCP9536590.1;transl_table=11 JANDXE010000004.1 Genbank gene 41754 44306 . - . ID=gene-NND05_03300;Name=NND05_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03300 JANDXE010000004.1 GeneMarkS-2+ CDS 41754 44306 . - 0 ID=cds-MCP9536591.1;Parent=gene-NND05_03300;Dbxref=NCBI_GP:MCP9536591.1;Name=MCP9536591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03300;product=hypothetical protein;protein_id=MCP9536591.1;transl_table=11 JANDXE010000004.1 Genbank gene 44394 45257 . - . ID=gene-NND05_03305;Name=NND05_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03305 JANDXE010000004.1 Protein Homology CDS 44394 45257 . - 0 ID=cds-MCP9536592.1;Parent=gene-NND05_03305;Dbxref=NCBI_GP:MCP9536592.1;Name=MCP9536592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01200.1;locus_tag=NND05_03305;product=GLPGLI family protein;protein_id=MCP9536592.1;transl_table=11 JANDXE010000004.1 Genbank pseudogene 46286 46540 . + . ID=gene-NND05_03310;Name=NND05_03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_03310;pseudo=true JANDXE010000004.1 Protein Homology CDS 46286 46540 . + 0 ID=cds-NND05_03310;Parent=gene-NND05_03310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008782182.1;locus_tag=NND05_03310;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JANDXE010000004.1 Genbank gene 46666 48183 . + . ID=gene-NND05_03315;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=NND05_03315 JANDXE010000004.1 Protein Homology CDS 46666 48183 . + 0 ID=cds-MCP9536593.1;Parent=gene-NND05_03315;Dbxref=NCBI_GP:MCP9536593.1;Name=MCP9536593.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337482.1;locus_tag=NND05_03315;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=MCP9536593.1;transl_table=11 JANDXE010000004.1 Genbank gene 48241 48906 . + . ID=gene-NND05_03320;Name=NND05_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03320 JANDXE010000004.1 Protein Homology CDS 48241 48906 . + 0 ID=cds-MCP9536594.1;Parent=gene-NND05_03320;Dbxref=NCBI_GP:MCP9536594.1;Name=MCP9536594.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004349313.1;locus_tag=NND05_03320;product=uracil-DNA glycosylase;protein_id=MCP9536594.1;transl_table=11 JANDXE010000004.1 Genbank gene 48998 49633 . + . ID=gene-NND05_03325;Name=NND05_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03325 JANDXE010000004.1 Protein Homology CDS 48998 49633 . + 0 ID=cds-MCP9536595.1;Parent=gene-NND05_03325;Dbxref=NCBI_GP:MCP9536595.1;Name=MCP9536595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847649.1;locus_tag=NND05_03325;product=DUF3109 family protein;protein_id=MCP9536595.1;transl_table=11 JANDXE010000004.1 Genbank gene 49667 50590 . - . ID=gene-NND05_03330;Name=NND05_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03330 JANDXE010000004.1 GeneMarkS-2+ CDS 49667 50590 . - 0 ID=cds-MCP9536596.1;Parent=gene-NND05_03330;Dbxref=NCBI_GP:MCP9536596.1;Name=MCP9536596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03330;product=hypothetical protein;protein_id=MCP9536596.1;transl_table=11 JANDXE010000004.1 Genbank gene 50691 53066 . - . ID=gene-NND05_03335;Name=NND05_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03335 JANDXE010000004.1 Protein Homology CDS 50691 53066 . - 0 ID=cds-MCP9536597.1;Parent=gene-NND05_03335;Dbxref=NCBI_GP:MCP9536597.1;Name=MCP9536597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847647.1;locus_tag=NND05_03335;product=glycoside hydrolase family 95 protein;protein_id=MCP9536597.1;transl_table=11 JANDXE010000004.1 Genbank gene 53184 55154 . - . ID=gene-NND05_03340;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=NND05_03340 JANDXE010000004.1 Protein Homology CDS 53184 55154 . - 0 ID=cds-MCP9536598.1;Parent=gene-NND05_03340;Dbxref=NCBI_GP:MCP9536598.1;Name=MCP9536598.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564449.1;locus_tag=NND05_03340;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=MCP9536598.1;transl_table=11 JANDXE010000004.1 Genbank gene 55356 55610 . - . ID=gene-NND05_03345;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NND05_03345 JANDXE010000004.1 Protein Homology CDS 55356 55610 . - 0 ID=cds-MCP9536599.1;Parent=gene-NND05_03345;Dbxref=NCBI_GP:MCP9536599.1;Name=MCP9536599.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369320.1;locus_tag=NND05_03345;product=30S ribosomal protein S20;protein_id=MCP9536599.1;transl_table=11 JANDXE010000004.1 Genbank gene 55844 56569 . + . ID=gene-NND05_03350;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=NND05_03350 JANDXE010000004.1 Protein Homology CDS 55844 56569 . + 0 ID=cds-MCP9536600.1;Parent=gene-NND05_03350;Dbxref=NCBI_GP:MCP9536600.1;Name=MCP9536600.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847643.1;locus_tag=NND05_03350;product=DNA repair protein RecO;protein_id=MCP9536600.1;transl_table=11 JANDXE010000004.1 Genbank gene 56581 57918 . - . ID=gene-NND05_03355;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=NND05_03355 JANDXE010000004.1 Protein Homology CDS 56581 57918 . - 0 ID=cds-MCP9536601.1;Parent=gene-NND05_03355;Dbxref=NCBI_GP:MCP9536601.1;Name=MCP9536601.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369338.1;locus_tag=NND05_03355;product=cell division protein FtsZ;protein_id=MCP9536601.1;transl_table=11 JANDXE010000004.1 Genbank gene 57946 59400 . - . ID=gene-NND05_03360;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NND05_03360 JANDXE010000004.1 Protein Homology CDS 57946 59400 . - 0 ID=cds-MCP9536602.1;Parent=gene-NND05_03360;Dbxref=NCBI_GP:MCP9536602.1;Name=MCP9536602.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341569.1;locus_tag=NND05_03360;product=cell division protein FtsA;protein_id=MCP9536602.1;transl_table=11 JANDXE010000004.1 Genbank gene 59440 60234 . - . ID=gene-NND05_03365;Name=NND05_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03365 JANDXE010000004.1 Protein Homology CDS 59440 60234 . - 0 ID=cds-MCP9536603.1;Parent=gene-NND05_03365;Dbxref=NCBI_GP:MCP9536603.1;Name=MCP9536603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847640.1;locus_tag=NND05_03365;product=cell division protein FtsQ;protein_id=MCP9536603.1;transl_table=11 JANDXE010000004.1 Genbank gene 60279 61655 . - . ID=gene-NND05_03370;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NND05_03370 JANDXE010000004.1 Protein Homology CDS 60279 61655 . - 0 ID=cds-MCP9536604.1;Parent=gene-NND05_03370;Dbxref=NCBI_GP:MCP9536604.1;Name=MCP9536604.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004358662.1;locus_tag=NND05_03370;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=MCP9536604.1;transl_table=11 JANDXE010000004.1 Genbank gene 61655 62761 . - . ID=gene-NND05_03375;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=NND05_03375 JANDXE010000004.1 Protein Homology CDS 61655 62761 . - 0 ID=cds-MCP9536605.1;Parent=gene-NND05_03375;Dbxref=NCBI_GP:MCP9536605.1;Name=MCP9536605.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344270.1;locus_tag=NND05_03375;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=MCP9536605.1;transl_table=11 JANDXE010000004.1 Genbank gene 62865 64142 . - . ID=gene-NND05_03380;Name=NND05_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03380 JANDXE010000004.1 Protein Homology CDS 62865 64142 . - 0 ID=cds-MCP9536606.1;Parent=gene-NND05_03380;Dbxref=NCBI_GP:MCP9536606.1;Name=MCP9536606.1;Ontology_term=GO:0051301,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847637.1;locus_tag=NND05_03380;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MCP9536606.1;transl_table=11 JANDXE010000004.1 Genbank gene 64200 65537 . - . ID=gene-NND05_03385;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=NND05_03385 JANDXE010000004.1 Protein Homology CDS 64200 65537 . - 0 ID=cds-MCP9536607.1;Parent=gene-NND05_03385;Dbxref=NCBI_GP:MCP9536607.1;Name=MCP9536607.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847636.1;locus_tag=NND05_03385;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=MCP9536607.1;transl_table=11 JANDXE010000004.1 Genbank gene 65579 66847 . - . ID=gene-NND05_03390;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=NND05_03390 JANDXE010000004.1 Protein Homology CDS 65579 66847 . - 0 ID=cds-MCP9536608.1;Parent=gene-NND05_03390;Dbxref=NCBI_GP:MCP9536608.1;Name=MCP9536608.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670948.1;locus_tag=NND05_03390;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=MCP9536608.1;transl_table=11 JANDXE010000004.1 Genbank gene 66882 68342 . - . ID=gene-NND05_03395;Name=NND05_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03395 JANDXE010000004.1 Protein Homology CDS 66882 68342 . - 0 ID=cds-MCP9536609.1;Parent=gene-NND05_03395;Dbxref=NCBI_GP:MCP9536609.1;Name=MCP9536609.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015298327.1;locus_tag=NND05_03395;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=MCP9536609.1;transl_table=11 JANDXE010000004.1 Genbank gene 68382 70538 . - . ID=gene-NND05_03400;Name=NND05_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03400 JANDXE010000004.1 Protein Homology CDS 68382 70538 . - 0 ID=cds-MCP9536610.1;Parent=gene-NND05_03400;Dbxref=NCBI_GP:MCP9536610.1;Name=MCP9536610.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008123860.1;locus_tag=NND05_03400;product=penicillin-binding transpeptidase domain-containing protein;protein_id=MCP9536610.1;transl_table=11 JANDXE010000004.1 Genbank gene 70535 71002 . - . ID=gene-NND05_03405;Name=NND05_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03405 JANDXE010000004.1 Protein Homology CDS 70535 71002 . - 0 ID=cds-MCP9536611.1;Parent=gene-NND05_03405;Dbxref=NCBI_GP:MCP9536611.1;Name=MCP9536611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847632.1;locus_tag=NND05_03405;product=FtsL-like putative cell division protein;protein_id=MCP9536611.1;transl_table=11 JANDXE010000004.1 Genbank gene 71050 71964 . - . ID=gene-NND05_03410;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NND05_03410 JANDXE010000004.1 Protein Homology CDS 71050 71964 . - 0 ID=cds-MCP9536612.1;Parent=gene-NND05_03410;Dbxref=NCBI_GP:MCP9536612.1;Name=MCP9536612.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920553.1;locus_tag=NND05_03410;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=MCP9536612.1;transl_table=11 JANDXE010000004.1 Genbank gene 72339 73166 . + . ID=gene-NND05_03415;Name=NND05_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03415 JANDXE010000004.1 Protein Homology CDS 72339 73166 . + 0 ID=cds-MCP9536613.1;Parent=gene-NND05_03415;Dbxref=NCBI_GP:MCP9536613.1;Name=MCP9536613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004358652.1;locus_tag=NND05_03415;product=glycerol acyltransferase;protein_id=MCP9536613.1;transl_table=11 JANDXE010000004.1 Genbank gene 73248 74240 . + . ID=gene-NND05_03420;Name=NND05_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03420 JANDXE010000004.1 Protein Homology CDS 73248 74240 . + 0 ID=cds-MCP9536614.1;Parent=gene-NND05_03420;Dbxref=NCBI_GP:MCP9536614.1;Name=MCP9536614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344259.1;locus_tag=NND05_03420;product=GNAT family N-acetyltransferase;protein_id=MCP9536614.1;transl_table=11 JANDXE010000004.1 Genbank gene 74791 75672 . + . ID=gene-NND05_03425;Name=NND05_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03425 JANDXE010000004.1 Protein Homology CDS 74791 75672 . + 0 ID=cds-MCP9536615.1;Parent=gene-NND05_03425;Dbxref=NCBI_GP:MCP9536615.1;Name=MCP9536615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006950675.1;locus_tag=NND05_03425;product=Fic family protein;protein_id=MCP9536615.1;transl_table=11 JANDXE010000004.1 Genbank gene 75987 76271 . + . ID=gene-NND05_03430;Name=NND05_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03430 JANDXE010000004.1 Protein Homology CDS 75987 76271 . + 0 ID=cds-MCP9536616.1;Parent=gene-NND05_03430;Dbxref=NCBI_GP:MCP9536616.1;Name=MCP9536616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025006.2;locus_tag=NND05_03430;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9536616.1;transl_table=11 JANDXE010000004.1 Genbank gene 76408 77994 . - . ID=gene-NND05_03435;Name=NND05_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03435 JANDXE010000004.1 Protein Homology CDS 76408 77994 . - 0 ID=cds-MCP9536617.1;Parent=gene-NND05_03435;Dbxref=NCBI_GP:MCP9536617.1;Name=MCP9536617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848291.1;locus_tag=NND05_03435;product=ATP-binding protein;protein_id=MCP9536617.1;transl_table=11 JANDXE010000004.1 Genbank gene 78481 81381 . + . ID=gene-NND05_03440;Name=NND05_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03440 JANDXE010000004.1 GeneMarkS-2+ CDS 78481 81381 . + 0 ID=cds-MCP9536618.1;Parent=gene-NND05_03440;Dbxref=NCBI_GP:MCP9536618.1;Name=MCP9536618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03440;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=MCP9536618.1;transl_table=11 JANDXE010000004.1 Genbank gene 81625 82962 . - . ID=gene-NND05_03445;Name=NND05_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03445 JANDXE010000004.1 Protein Homology CDS 81625 82962 . - 0 ID=cds-MCP9536619.1;Parent=gene-NND05_03445;Dbxref=NCBI_GP:MCP9536619.1;Name=MCP9536619.1;Ontology_term=GO:0006203,GO:0008832;gbkey=CDS;go_function=dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967711.1;locus_tag=NND05_03445;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=MCP9536619.1;transl_table=11 JANDXE010000004.1 Genbank gene 83121 83558 . + . ID=gene-NND05_03450;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=NND05_03450 JANDXE010000004.1 Protein Homology CDS 83121 83558 . + 0 ID=cds-MCP9536620.1;Parent=gene-NND05_03450;Dbxref=NCBI_GP:MCP9536620.1;Name=MCP9536620.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384547.1;locus_tag=NND05_03450;product=dUTP diphosphatase;protein_id=MCP9536620.1;transl_table=11 JANDXE010000004.1 Genbank gene 83608 85473 . + . ID=gene-NND05_03455;Name=NND05_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03455 JANDXE010000004.1 Protein Homology CDS 83608 85473 . + 0 ID=cds-MCP9536621.1;Parent=gene-NND05_03455;Dbxref=NCBI_GP:MCP9536621.1;Name=MCP9536621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847625.1;locus_tag=NND05_03455;product=tetratricopeptide repeat protein;protein_id=MCP9536621.1;transl_table=11 JANDXE010000004.1 Genbank gene 85479 86375 . + . ID=gene-NND05_03460;Name=NND05_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03460 JANDXE010000004.1 Protein Homology CDS 85479 86375 . + 0 ID=cds-MCP9536622.1;Parent=gene-NND05_03460;Dbxref=NCBI_GP:MCP9536622.1;Name=MCP9536622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344943.1;locus_tag=NND05_03460;product=DUF4292 domain-containing protein;protein_id=MCP9536622.1;transl_table=11 JANDXE010000004.1 Genbank gene 86417 88165 . + . ID=gene-NND05_03465;Name=NND05_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03465 JANDXE010000004.1 Protein Homology CDS 86417 88165 . + 0 ID=cds-MCP9536623.1;Parent=gene-NND05_03465;Dbxref=NCBI_GP:MCP9536623.1;Name=MCP9536623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920590.1;locus_tag=NND05_03465;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=MCP9536623.1;transl_table=11 JANDXE010000004.1 Genbank gene 88216 89280 . - . ID=gene-NND05_03470;Name=NND05_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03470 JANDXE010000004.1 Protein Homology CDS 88216 89280 . - 0 ID=cds-MCP9536624.1;Parent=gene-NND05_03470;Dbxref=NCBI_GP:MCP9536624.1;Name=MCP9536624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847612.1;locus_tag=NND05_03470;product=M20 family metallo-hydrolase;protein_id=MCP9536624.1;transl_table=11 JANDXE010000004.1 Genbank gene 89411 91219 . + . ID=gene-NND05_03475;Name=NND05_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03475 JANDXE010000004.1 Protein Homology CDS 89411 91219 . + 0 ID=cds-MCP9536625.1;Parent=gene-NND05_03475;Dbxref=NCBI_GP:MCP9536625.1;Name=MCP9536625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134677.1;locus_tag=NND05_03475;product=long-chain fatty acid--CoA ligase;protein_id=MCP9536625.1;transl_table=11 JANDXE010000004.1 Genbank gene 91246 92370 . + . ID=gene-NND05_03480;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=NND05_03480 JANDXE010000004.1 Protein Homology CDS 91246 92370 . + 0 ID=cds-MCP9536626.1;Parent=gene-NND05_03480;Dbxref=NCBI_GP:MCP9536626.1;Name=MCP9536626.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063646.1;locus_tag=NND05_03480;product=peptide chain release factor 2;protein_id=MCP9536626.1;transl_table=11 JANDXE010000004.1 Genbank gene 92400 92549 . + . ID=gene-NND05_03485;Name=NND05_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03485 JANDXE010000004.1 Protein Homology CDS 92400 92549 . + 0 ID=cds-MCP9536627.1;Parent=gene-NND05_03485;Dbxref=NCBI_GP:MCP9536627.1;Name=MCP9536627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462728.1;locus_tag=NND05_03485;product=hypothetical protein;protein_id=MCP9536627.1;transl_table=11 JANDXE010000004.1 Genbank gene 92597 93082 . + . ID=gene-NND05_03490;Name=NND05_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03490 JANDXE010000004.1 Protein Homology CDS 92597 93082 . + 0 ID=cds-MCP9536628.1;Parent=gene-NND05_03490;Dbxref=NCBI_GP:MCP9536628.1;Name=MCP9536628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344969.1;locus_tag=NND05_03490;product=CYTH domain-containing protein;protein_id=MCP9536628.1;transl_table=11 JANDXE010000004.1 Genbank gene 93285 94646 . + . ID=gene-NND05_03495;Name=NND05_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03495 JANDXE010000004.1 Protein Homology CDS 93285 94646 . + 0 ID=cds-MCP9536629.1;Parent=gene-NND05_03495;Dbxref=NCBI_GP:MCP9536629.1;Name=MCP9536629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007175088.1;locus_tag=NND05_03495;product=sodium-dependent transporter;protein_id=MCP9536629.1;transl_table=11 JANDXE010000004.1 Genbank gene 94729 96084 . + . ID=gene-NND05_03500;Name=NND05_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03500 JANDXE010000004.1 Protein Homology CDS 94729 96084 . + 0 ID=cds-MCP9536630.1;Parent=gene-NND05_03500;Dbxref=NCBI_GP:MCP9536630.1;Name=MCP9536630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344976.1;locus_tag=NND05_03500;product=sodium-dependent transporter;protein_id=MCP9536630.1;transl_table=11 JANDXE010000004.1 Genbank gene 96182 97141 . - . ID=gene-NND05_03505;Name=NND05_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03505 JANDXE010000004.1 Protein Homology CDS 96182 97141 . - 0 ID=cds-MCP9536631.1;Parent=gene-NND05_03505;Dbxref=NCBI_GP:MCP9536631.1;Name=MCP9536631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967678.1;locus_tag=NND05_03505;product=helix-hairpin-helix domain-containing protein;protein_id=MCP9536631.1;transl_table=11 JANDXE010000004.1 Genbank gene 97164 97236 . - . ID=gene-NND05_03510;Name=NND05_03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_03510 JANDXE010000004.1 tRNAscan-SE tRNA 97164 97236 . - . ID=rna-NND05_03510;Parent=gene-NND05_03510;anticodon=(pos:complement(97201..97203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_03510;product=tRNA-Pro JANDXE010000004.1 tRNAscan-SE exon 97164 97236 . - . ID=exon-NND05_03510-1;Parent=rna-NND05_03510;anticodon=(pos:complement(97201..97203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_03510;product=tRNA-Pro JANDXE010000004.1 Genbank gene 97412 97484 . + . ID=gene-NND05_03515;Name=NND05_03515;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_03515 JANDXE010000004.1 tRNAscan-SE tRNA 97412 97484 . + . ID=rna-NND05_03515;Parent=gene-NND05_03515;anticodon=(pos:97445..97447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_03515;product=tRNA-Phe JANDXE010000004.1 tRNAscan-SE exon 97412 97484 . + . ID=exon-NND05_03515-1;Parent=rna-NND05_03515;anticodon=(pos:97445..97447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_03515;product=tRNA-Phe JANDXE010000004.1 Genbank gene 97767 98843 . + . ID=gene-NND05_03520;Name=NND05_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03520 JANDXE010000004.1 Protein Homology CDS 97767 98843 . + 0 ID=cds-MCP9536632.1;Parent=gene-NND05_03520;Dbxref=NCBI_GP:MCP9536632.1;Name=MCP9536632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009000757.1;locus_tag=NND05_03520;product=arabinogalactan endo-1%2C4-beta-galactosidase;protein_id=MCP9536632.1;transl_table=11 JANDXE010000004.1 Genbank gene 98933 101392 . + . ID=gene-NND05_03525;Name=NND05_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03525 JANDXE010000004.1 Protein Homology CDS 98933 101392 . + 0 ID=cds-MCP9536633.1;Parent=gene-NND05_03525;Dbxref=NCBI_GP:MCP9536633.1;Name=MCP9536633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847597.1;locus_tag=NND05_03525;product=DUF4982 domain-containing protein;protein_id=MCP9536633.1;transl_table=11 JANDXE010000004.1 Genbank gene 101731 104628 . + . ID=gene-NND05_03530;Name=NND05_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03530 JANDXE010000004.1 Protein Homology CDS 101731 104628 . + 0 ID=cds-MCP9536634.1;Parent=gene-NND05_03530;Dbxref=NCBI_GP:MCP9536634.1;Name=MCP9536634.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_03530;product=helix-turn-helix domain-containing protein;protein_id=MCP9536634.1;transl_table=11 JANDXE010000004.1 Genbank gene 104912 107848 . + . ID=gene-NND05_03535;Name=NND05_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03535 JANDXE010000004.1 Protein Homology CDS 104912 107848 . + 0 ID=cds-MCP9536635.1;Parent=gene-NND05_03535;Dbxref=NCBI_GP:MCP9536635.1;Name=MCP9536635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004293317.1;locus_tag=NND05_03535;product=TonB-dependent receptor;protein_id=MCP9536635.1;transl_table=11 JANDXE010000004.1 Genbank gene 107871 109397 . + . ID=gene-NND05_03540;Name=NND05_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03540 JANDXE010000004.1 Protein Homology CDS 107871 109397 . + 0 ID=cds-MCP9536636.1;Parent=gene-NND05_03540;Dbxref=NCBI_GP:MCP9536636.1;Name=MCP9536636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847593.1;locus_tag=NND05_03540;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536636.1;transl_table=11 JANDXE010000004.1 Genbank gene 109413 110315 . + . ID=gene-NND05_03545;Name=NND05_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03545 JANDXE010000004.1 Protein Homology CDS 109413 110315 . + 0 ID=cds-MCP9536637.1;Parent=gene-NND05_03545;Dbxref=NCBI_GP:MCP9536637.1;Name=MCP9536637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847592.1;locus_tag=NND05_03545;product=DUF4984 domain-containing protein;protein_id=MCP9536637.1;transl_table=11 JANDXE010000004.1 Genbank gene 110333 111898 . + . ID=gene-NND05_03550;Name=NND05_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03550 JANDXE010000004.1 Protein Homology CDS 110333 111898 . + 0 ID=cds-MCP9536638.1;Parent=gene-NND05_03550;Dbxref=NCBI_GP:MCP9536638.1;Name=MCP9536638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027709.2;locus_tag=NND05_03550;product=DUF5003 domain-containing protein;protein_id=MCP9536638.1;transl_table=11 JANDXE010000004.1 Genbank gene 111898 114573 . + . ID=gene-NND05_03555;Name=NND05_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03555 JANDXE010000004.1 Protein Homology CDS 111898 114573 . + 0 ID=cds-MCP9536639.1;Parent=gene-NND05_03555;Dbxref=NCBI_GP:MCP9536639.1;Name=MCP9536639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847590.1;locus_tag=NND05_03555;product=DUF4458 domain-containing protein;protein_id=MCP9536639.1;transl_table=11 JANDXE010000004.1 Genbank gene 114595 116649 . + . ID=gene-NND05_03560;Name=NND05_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03560 JANDXE010000004.1 Protein Homology CDS 114595 116649 . + 0 ID=cds-MCP9536640.1;Parent=gene-NND05_03560;Dbxref=NCBI_GP:MCP9536640.1;Name=MCP9536640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847589.1;locus_tag=NND05_03560;product=BACON domain-containing protein;protein_id=MCP9536640.1;transl_table=11 JANDXE010000004.1 Genbank pseudogene 116851 117180 . + . ID=gene-NND05_03565;Name=NND05_03565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_03565;pseudo=true JANDXE010000004.1 Protein Homology CDS 116851 117180 . + 0 ID=cds-NND05_03565;Parent=gene-NND05_03565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027679.2;locus_tag=NND05_03565;product=protease;pseudo=true;transl_table=11 JANDXE010000004.1 Genbank gene 117409 118755 . + . ID=gene-NND05_03570;Name=NND05_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03570 JANDXE010000004.1 Protein Homology CDS 117409 118755 . + 0 ID=cds-MCP9536641.1;Parent=gene-NND05_03570;Dbxref=NCBI_GP:MCP9536641.1;Name=MCP9536641.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=NND05_03570;product=S8 family serine peptidase;protein_id=MCP9536641.1;transl_table=11 JANDXE010000004.1 Genbank gene 118808 119581 . + . ID=gene-NND05_03575;Name=NND05_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03575 JANDXE010000004.1 Protein Homology CDS 118808 119581 . + 0 ID=cds-MCP9536642.1;Parent=gene-NND05_03575;Dbxref=NCBI_GP:MCP9536642.1;Name=MCP9536642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847587.1;locus_tag=NND05_03575;product=DUF1573 domain-containing protein;protein_id=MCP9536642.1;transl_table=11 JANDXE010000004.1 Genbank gene 119677 120159 . + . ID=gene-NND05_03580;Name=NND05_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03580 JANDXE010000004.1 Protein Homology CDS 119677 120159 . + 0 ID=cds-MCP9536643.1;Parent=gene-NND05_03580;Dbxref=NCBI_GP:MCP9536643.1;Name=MCP9536643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847586.1;locus_tag=NND05_03580;product=lipocalin family protein;protein_id=MCP9536643.1;transl_table=11 JANDXE010000004.1 Genbank gene 120432 121391 . + . ID=gene-NND05_03585;Name=NND05_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03585 JANDXE010000004.1 Protein Homology CDS 120432 121391 . + 0 ID=cds-MCP9536644.1;Parent=gene-NND05_03585;Dbxref=NCBI_GP:MCP9536644.1;Name=MCP9536644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009433975.1;locus_tag=NND05_03585;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=MCP9536644.1;transl_table=11 JANDXE010000004.1 Genbank gene 122026 122901 . + . ID=gene-NND05_03590;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=NND05_03590 JANDXE010000004.1 Protein Homology CDS 122026 122901 . + 0 ID=cds-MCP9536645.1;Parent=gene-NND05_03590;Dbxref=NCBI_GP:MCP9536645.1;Name=MCP9536645.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009230280.1;locus_tag=NND05_03590;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=MCP9536645.1;transl_table=11 JANDXE010000004.1 Genbank gene 122971 123540 . + . ID=gene-NND05_03595;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=NND05_03595 JANDXE010000004.1 Protein Homology CDS 122971 123540 . + 0 ID=cds-MCP9536646.1;Parent=gene-NND05_03595;Dbxref=NCBI_GP:MCP9536646.1;Name=MCP9536646.1;Ontology_term=GO:0042823,GO:0016884;gbkey=CDS;gene=pdxT;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847582.1;locus_tag=NND05_03595;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=MCP9536646.1;transl_table=11 JANDXE010000004.1 Genbank gene 123750 125051 . - . ID=gene-NND05_03600;Name=NND05_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03600 JANDXE010000004.1 Protein Homology CDS 123750 125051 . - 0 ID=cds-MCP9536647.1;Parent=gene-NND05_03600;Dbxref=NCBI_GP:MCP9536647.1;Name=MCP9536647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354379.1;locus_tag=NND05_03600;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=MCP9536647.1;transl_table=11 JANDXE010000004.1 Genbank gene 125124 125414 . + . ID=gene-NND05_03605;Name=NND05_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03605 JANDXE010000004.1 GeneMarkS-2+ CDS 125124 125414 . + 0 ID=cds-MCP9536648.1;Parent=gene-NND05_03605;Dbxref=NCBI_GP:MCP9536648.1;Name=MCP9536648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03605;product=hypothetical protein;protein_id=MCP9536648.1;transl_table=11 JANDXE010000004.1 Genbank gene 125634 126479 . + . ID=gene-NND05_03610;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NND05_03610 JANDXE010000004.1 Protein Homology CDS 125634 126479 . + 0 ID=cds-MCP9536649.1;Parent=gene-NND05_03610;Dbxref=NCBI_GP:MCP9536649.1;Name=MCP9536649.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378025.1;locus_tag=NND05_03610;product=dihydropteroate synthase;protein_id=MCP9536649.1;transl_table=11 JANDXE010000004.1 Genbank gene 126476 127246 . + . ID=gene-NND05_03615;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=NND05_03615 JANDXE010000004.1 Protein Homology CDS 126476 127246 . + 0 ID=cds-MCP9536650.1;Parent=gene-NND05_03615;Dbxref=NCBI_GP:MCP9536650.1;Name=MCP9536650.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847577.1;locus_tag=NND05_03615;product=diadenylate cyclase CdaA;protein_id=MCP9536650.1;transl_table=11 JANDXE010000004.1 Genbank gene 127509 128555 . + . ID=gene-NND05_03620;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=NND05_03620 JANDXE010000004.1 Protein Homology CDS 127509 128555 . + 0 ID=cds-MCP9536651.1;Parent=gene-NND05_03620;Dbxref=NCBI_GP:MCP9536651.1;Name=MCP9536651.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847576.1;locus_tag=NND05_03620;product=phosphate acetyltransferase;protein_id=MCP9536651.1;transl_table=11 JANDXE010000004.1 Genbank gene 128595 129797 . + . ID=gene-NND05_03625;Name=NND05_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03625 JANDXE010000004.1 Protein Homology CDS 128595 129797 . + 0 ID=cds-MCP9536652.1;Parent=gene-NND05_03625;Dbxref=NCBI_GP:MCP9536652.1;Name=MCP9536652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847575.1;locus_tag=NND05_03625;product=acetate kinase;protein_id=MCP9536652.1;transl_table=11 JANDXE010000004.1 Genbank gene 129941 130987 . + . ID=gene-NND05_03630;Name=NND05_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03630 JANDXE010000004.1 Protein Homology CDS 129941 130987 . + 0 ID=cds-MCP9536653.1;Parent=gene-NND05_03630;Dbxref=NCBI_GP:MCP9536653.1;Name=MCP9536653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344857.1;locus_tag=NND05_03630;product=sugar kinase;protein_id=MCP9536653.1;transl_table=11 JANDXE010000004.1 Genbank gene 131086 131850 . - . ID=gene-NND05_03635;Name=NND05_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03635 JANDXE010000004.1 Protein Homology CDS 131086 131850 . - 0 ID=cds-MCP9536654.1;Parent=gene-NND05_03635;Dbxref=NCBI_GP:MCP9536654.1;Name=MCP9536654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361641.1;locus_tag=NND05_03635;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=MCP9536654.1;transl_table=11 JANDXE010000004.1 Genbank gene 131910 132230 . - . ID=gene-NND05_03640;Name=NND05_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03640 JANDXE010000004.1 Protein Homology CDS 131910 132230 . - 0 ID=cds-MCP9536655.1;Parent=gene-NND05_03640;Dbxref=NCBI_GP:MCP9536655.1;Name=MCP9536655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384638.1;locus_tag=NND05_03640;product=iron-sulfur cluster assembly protein;protein_id=MCP9536655.1;transl_table=11 JANDXE010000004.1 Genbank gene 132333 133022 . - . ID=gene-NND05_03645;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=NND05_03645 JANDXE010000004.1 Protein Homology CDS 132333 133022 . - 0 ID=cds-MCP9536656.1;Parent=gene-NND05_03645;Dbxref=NCBI_GP:MCP9536656.1;Name=MCP9536656.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847571.1;locus_tag=NND05_03645;product=DNA repair protein RadC;protein_id=MCP9536656.1;transl_table=11 JANDXE010000004.1 Genbank gene 133029 134087 . - . ID=gene-NND05_03650;Name=NND05_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03650 JANDXE010000004.1 Protein Homology CDS 133029 134087 . - 0 ID=cds-MCP9536657.1;Parent=gene-NND05_03650;Dbxref=NCBI_GP:MCP9536657.1;Name=MCP9536657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004363598.1;locus_tag=NND05_03650;product=glycosyltransferase;protein_id=MCP9536657.1;transl_table=11 JANDXE010000004.1 Genbank gene 134151 134717 . - . ID=gene-NND05_03655;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NND05_03655 JANDXE010000004.1 Protein Homology CDS 134151 134717 . - 0 ID=cds-MCP9536658.1;Parent=gene-NND05_03655;Dbxref=NCBI_GP:MCP9536658.1;Name=MCP9536658.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564597.1;locus_tag=NND05_03655;product=elongation factor P;protein_id=MCP9536658.1;transl_table=11 JANDXE010000004.1 Genbank gene 134938 135093 . + . ID=gene-NND05_03660;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NND05_03660 JANDXE010000004.1 Protein Homology CDS 134938 135093 . + 0 ID=cds-MCP9536659.1;Parent=gene-NND05_03660;Dbxref=NCBI_GP:MCP9536659.1;Name=MCP9536659.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005840676.1;locus_tag=NND05_03660;product=50S ribosomal protein L34;protein_id=MCP9536659.1;transl_table=11 JANDXE010000004.1 Genbank gene 135265 135999 . + . ID=gene-NND05_03665;Name=NND05_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03665 JANDXE010000004.1 Protein Homology CDS 135265 135999 . + 0 ID=cds-MCP9536660.1;Parent=gene-NND05_03665;Dbxref=NCBI_GP:MCP9536660.1;Name=MCP9536660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847567.1;locus_tag=NND05_03665;product=PASTA domain-containing protein;protein_id=MCP9536660.1;transl_table=11 JANDXE010000004.1 Genbank gene 136051 137142 . + . ID=gene-NND05_03670;Name=NND05_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03670 JANDXE010000004.1 Protein Homology CDS 136051 137142 . + 0 ID=cds-MCP9536661.1;Parent=gene-NND05_03670;Dbxref=NCBI_GP:MCP9536661.1;Name=MCP9536661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847566.1;locus_tag=NND05_03670;product=RluA family pseudouridine synthase;protein_id=MCP9536661.1;transl_table=11 JANDXE010000004.1 Genbank gene 137148 138143 . + . ID=gene-NND05_03675;Name=NND05_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03675 JANDXE010000004.1 Protein Homology CDS 137148 138143 . + 0 ID=cds-MCP9536662.1;Parent=gene-NND05_03675;Dbxref=NCBI_GP:MCP9536662.1;Name=MCP9536662.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464323.1;locus_tag=NND05_03675;product=D-alanine--D-alanine ligase;protein_id=MCP9536662.1;transl_table=11 JANDXE010000004.1 Genbank gene 138227 139375 . + . ID=gene-NND05_03680;Name=NND05_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03680 JANDXE010000004.1 Protein Homology CDS 138227 139375 . + 0 ID=cds-MCP9536663.1;Parent=gene-NND05_03680;Dbxref=NCBI_GP:MCP9536663.1;Name=MCP9536663.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341005.1;locus_tag=NND05_03680;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=MCP9536663.1;transl_table=11 JANDXE010000004.1 Genbank gene 139827 143069 . + . ID=gene-NND05_03685;Name=NND05_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03685 JANDXE010000004.1 Protein Homology CDS 139827 143069 . + 0 ID=cds-MCP9536664.1;Parent=gene-NND05_03685;Dbxref=NCBI_GP:MCP9536664.1;Name=MCP9536664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016273968.1;locus_tag=NND05_03685;product=TonB-dependent receptor;protein_id=MCP9536664.1;transl_table=11 JANDXE010000004.1 Genbank gene 143088 144845 . + . ID=gene-NND05_03690;Name=NND05_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03690 JANDXE010000004.1 Protein Homology CDS 143088 144845 . + 0 ID=cds-MCP9536665.1;Parent=gene-NND05_03690;Dbxref=NCBI_GP:MCP9536665.1;Name=MCP9536665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013545879.1;locus_tag=NND05_03690;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536665.1;transl_table=11 JANDXE010000004.1 Genbank gene 144878 146116 . + . ID=gene-NND05_03695;Name=NND05_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03695 JANDXE010000004.1 GeneMarkS-2+ CDS 144878 146116 . + 0 ID=cds-MCP9536666.1;Parent=gene-NND05_03695;Dbxref=NCBI_GP:MCP9536666.1;Name=MCP9536666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03695;product=hypothetical protein;protein_id=MCP9536666.1;transl_table=11 JANDXE010000004.1 Genbank gene 146286 147392 . + . ID=gene-NND05_03700;Name=NND05_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03700 JANDXE010000004.1 Protein Homology CDS 146286 147392 . + 0 ID=cds-MCP9536667.1;Parent=gene-NND05_03700;Dbxref=NCBI_GP:MCP9536667.1;Name=MCP9536667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004311125.1;locus_tag=NND05_03700;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9536667.1;transl_table=11 JANDXE010000004.1 Genbank gene 147782 148468 . + . ID=gene-NND05_03705;Name=NND05_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03705 JANDXE010000004.1 Protein Homology CDS 147782 148468 . + 0 ID=cds-MCP9536668.1;Parent=gene-NND05_03705;Dbxref=NCBI_GP:MCP9536668.1;Name=MCP9536668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037081.2;locus_tag=NND05_03705;product=HU family DNA-binding protein;protein_id=MCP9536668.1;transl_table=11 JANDXE010000004.1 Genbank gene 148531 150360 . + . ID=gene-NND05_03710;Name=NND05_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03710 JANDXE010000004.1 Protein Homology CDS 148531 150360 . + 0 ID=cds-MCP9536669.1;Parent=gene-NND05_03710;Dbxref=NCBI_GP:MCP9536669.1;Name=MCP9536669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039640.1;locus_tag=NND05_03710;product=DUF6057 family protein;protein_id=MCP9536669.1;transl_table=11 JANDXE010000004.1 Genbank gene 150446 151939 . + . ID=gene-NND05_03715;Name=NND05_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03715 JANDXE010000004.1 Protein Homology CDS 150446 151939 . + 0 ID=cds-MCP9536670.1;Parent=gene-NND05_03715;Dbxref=NCBI_GP:MCP9536670.1;Name=MCP9536670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952992.1;locus_tag=NND05_03715;product=hypothetical protein;protein_id=MCP9536670.1;transl_table=11 JANDXE010000004.1 Genbank gene 152010 153485 . - . ID=gene-NND05_03720;Name=NND05_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03720 JANDXE010000004.1 Protein Homology CDS 152010 153485 . - 0 ID=cds-MCP9536671.1;Parent=gene-NND05_03720;Dbxref=NCBI_GP:MCP9536671.1;Name=MCP9536671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064228.1;locus_tag=NND05_03720;product=hypothetical protein;protein_id=MCP9536671.1;transl_table=11 JANDXE010000004.1 Genbank gene 153527 155212 . - . ID=gene-NND05_03725;Name=NND05_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03725 JANDXE010000004.1 Protein Homology CDS 153527 155212 . - 0 ID=cds-MCP9536672.1;Parent=gene-NND05_03725;Dbxref=NCBI_GP:MCP9536672.1;Name=MCP9536672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039640.1;locus_tag=NND05_03725;product=DUF6057 family protein;protein_id=MCP9536672.1;transl_table=11 JANDXE010000004.1 Genbank gene 155329 156381 . - . ID=gene-NND05_03730;Name=NND05_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03730 JANDXE010000004.1 Protein Homology CDS 155329 156381 . - 0 ID=cds-MCP9536673.1;Parent=gene-NND05_03730;Dbxref=NCBI_GP:MCP9536673.1;Name=MCP9536673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847560.1;locus_tag=NND05_03730;product=Rid family hydrolase;protein_id=MCP9536673.1;transl_table=11 JANDXE010000004.1 Genbank gene 156561 157523 . - . ID=gene-NND05_03735;Name=NND05_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03735 JANDXE010000004.1 Protein Homology CDS 156561 157523 . - 0 ID=cds-MCP9536674.1;Parent=gene-NND05_03735;Dbxref=NCBI_GP:MCP9536674.1;Name=MCP9536674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847559.1;locus_tag=NND05_03735;product=acetylornithine carbamoyltransferase;protein_id=MCP9536674.1;transl_table=11 JANDXE010000004.1 Genbank gene 157684 159015 . - . ID=gene-NND05_03740;Name=NND05_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03740 JANDXE010000004.1 Protein Homology CDS 157684 159015 . - 0 ID=cds-MCP9536675.1;Parent=gene-NND05_03740;Dbxref=NCBI_GP:MCP9536675.1;Name=MCP9536675.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847557.1;locus_tag=NND05_03740;product=glutamate-5-semialdehyde dehydrogenase;protein_id=MCP9536675.1;transl_table=11 JANDXE010000004.1 Genbank gene 159247 159993 . - . ID=gene-NND05_03745;Name=NND05_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03745 JANDXE010000004.1 Protein Homology CDS 159247 159993 . - 0 ID=cds-MCP9536676.1;Parent=gene-NND05_03745;Dbxref=NCBI_GP:MCP9536676.1;Name=MCP9536676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018009.2;locus_tag=NND05_03745;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9536676.1;transl_table=11 JANDXE010000004.1 Genbank gene 160101 160400 . - . ID=gene-NND05_03750;Name=NND05_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03750 JANDXE010000004.1 Protein Homology CDS 160101 160400 . - 0 ID=cds-MCP9536677.1;Parent=gene-NND05_03750;Dbxref=NCBI_GP:MCP9536677.1;Name=MCP9536677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036995.2;locus_tag=NND05_03750;product=DUF1016 N-terminal domain-containing protein;protein_id=MCP9536677.1;transl_table=11 JANDXE010000004.1 Genbank gene 160903 161070 . + . ID=gene-NND05_03755;Name=NND05_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03755 JANDXE010000004.1 GeneMarkS-2+ CDS 160903 161070 . + 0 ID=cds-MCP9536678.1;Parent=gene-NND05_03755;Dbxref=NCBI_GP:MCP9536678.1;Name=MCP9536678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03755;product=hypothetical protein;protein_id=MCP9536678.1;transl_table=11 JANDXE010000004.1 Genbank gene 161084 161605 . + . ID=gene-NND05_03760;Name=NND05_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03760 JANDXE010000004.1 GeneMarkS-2+ CDS 161084 161605 . + 0 ID=cds-MCP9536679.1;Parent=gene-NND05_03760;Dbxref=NCBI_GP:MCP9536679.1;Name=MCP9536679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03760;product=hypothetical protein;protein_id=MCP9536679.1;transl_table=11 JANDXE010000004.1 Genbank gene 161642 162082 . + . ID=gene-NND05_03765;Name=NND05_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03765 JANDXE010000004.1 GeneMarkS-2+ CDS 161642 162082 . + 0 ID=cds-MCP9536680.1;Parent=gene-NND05_03765;Dbxref=NCBI_GP:MCP9536680.1;Name=MCP9536680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03765;product=hypothetical protein;protein_id=MCP9536680.1;transl_table=11 JANDXE010000004.1 Genbank gene 162532 163659 . + . ID=gene-NND05_03770;Name=NND05_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03770 JANDXE010000004.1 Protein Homology CDS 162532 163659 . + 0 ID=cds-MCP9536681.1;Parent=gene-NND05_03770;Dbxref=NCBI_GP:MCP9536681.1;Name=MCP9536681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021778.2;locus_tag=NND05_03770;product=lactonase family protein;protein_id=MCP9536681.1;transl_table=11 JANDXE010000004.1 Genbank gene 163693 165309 . - . ID=gene-NND05_03775;Name=NND05_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03775 JANDXE010000004.1 Protein Homology CDS 163693 165309 . - 0 ID=cds-MCP9536682.1;Parent=gene-NND05_03775;Dbxref=NCBI_GP:MCP9536682.1;Name=MCP9536682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847552.1;locus_tag=NND05_03775;product=DUF6377 domain-containing protein;protein_id=MCP9536682.1;transl_table=11 JANDXE010000004.1 Genbank gene 165640 167919 . + . ID=gene-NND05_03780;Name=NND05_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03780 JANDXE010000004.1 Protein Homology CDS 165640 167919 . + 0 ID=cds-MCP9536683.1;Parent=gene-NND05_03780;Dbxref=NCBI_GP:MCP9536683.1;Name=MCP9536683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847551.1;locus_tag=NND05_03780;product=TonB-dependent receptor;protein_id=MCP9536683.1;transl_table=11 JANDXE010000004.1 Genbank gene 167984 170164 . + . ID=gene-NND05_03785;Name=NND05_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03785 JANDXE010000004.1 Protein Homology CDS 167984 170164 . + 0 ID=cds-MCP9536684.1;Parent=gene-NND05_03785;Dbxref=NCBI_GP:MCP9536684.1;Name=MCP9536684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847550.1;locus_tag=NND05_03785;product=alpha-galactosidase;protein_id=MCP9536684.1;transl_table=11 JANDXE010000004.1 Genbank gene 170260 171042 . - . ID=gene-NND05_03790;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NND05_03790 JANDXE010000004.1 Protein Homology CDS 170260 171042 . - 0 ID=cds-MCP9536685.1;Parent=gene-NND05_03790;Dbxref=NCBI_GP:MCP9536685.1;Name=MCP9536685.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847544.1;locus_tag=NND05_03790;product=glutamate 5-kinase;protein_id=MCP9536685.1;transl_table=11 JANDXE010000004.1 Genbank gene 171106 172767 . - . ID=gene-NND05_03795;Name=NND05_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03795 JANDXE010000004.1 Protein Homology CDS 171106 172767 . - 0 ID=cds-MCP9536686.1;Parent=gene-NND05_03795;Dbxref=NCBI_GP:MCP9536686.1;Name=MCP9536686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369430.1;locus_tag=NND05_03795;product=AMP-binding protein;protein_id=MCP9536686.1;transl_table=11 JANDXE010000004.1 Genbank gene 172778 173332 . - . ID=gene-NND05_03800;Name=NND05_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03800 JANDXE010000004.1 Protein Homology CDS 172778 173332 . - 0 ID=cds-MCP9536687.1;Parent=gene-NND05_03800;Dbxref=NCBI_GP:MCP9536687.1;Name=MCP9536687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345171.1;locus_tag=NND05_03800;product=XRE family transcriptional regulator;protein_id=MCP9536687.1;transl_table=11 JANDXE010000004.1 Genbank gene 173356 174138 . - . ID=gene-NND05_03805;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NND05_03805 JANDXE010000004.1 Protein Homology CDS 173356 174138 . - 0 ID=cds-MCP9536688.1;Parent=gene-NND05_03805;Dbxref=NCBI_GP:MCP9536688.1;Name=MCP9536688.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340993.1;locus_tag=NND05_03805;product=pyrroline-5-carboxylate reductase;protein_id=MCP9536688.1;transl_table=11 JANDXE010000004.1 Genbank gene 174262 176337 . - . ID=gene-NND05_03810;Name=NND05_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03810 JANDXE010000004.1 Protein Homology CDS 174262 176337 . - 0 ID=cds-MCP9536689.1;Parent=gene-NND05_03810;Dbxref=NCBI_GP:MCP9536689.1;Name=MCP9536689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847540.1;locus_tag=NND05_03810;product=outer membrane beta-barrel protein;protein_id=MCP9536689.1;transl_table=11 JANDXE010000004.1 Genbank gene 176359 177417 . - . ID=gene-NND05_03815;Name=NND05_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03815 JANDXE010000004.1 Protein Homology CDS 176359 177417 . - 0 ID=cds-MCP9536690.1;Parent=gene-NND05_03815;Dbxref=NCBI_GP:MCP9536690.1;Name=MCP9536690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=NND05_03815;product=tetratricopeptide repeat protein;protein_id=MCP9536690.1;transl_table=11 JANDXE010000004.1 Genbank gene 177432 177953 . - . ID=gene-NND05_03820;Name=NND05_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03820 JANDXE010000004.1 Protein Homology CDS 177432 177953 . - 0 ID=cds-MCP9536691.1;Parent=gene-NND05_03820;Dbxref=NCBI_GP:MCP9536691.1;Name=MCP9536691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015506.2;locus_tag=NND05_03820;product=energy transducer TonB;protein_id=MCP9536691.1;transl_table=11 JANDXE010000004.1 Genbank gene 177959 178327 . - . ID=gene-NND05_03825;Name=NND05_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03825 JANDXE010000004.1 Protein Homology CDS 177959 178327 . - 0 ID=cds-MCP9536692.1;Parent=gene-NND05_03825;Dbxref=NCBI_GP:MCP9536692.1;Name=MCP9536692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016296.2;locus_tag=NND05_03825;product=LytTR family transcriptional regulator;protein_id=MCP9536692.1;transl_table=11 JANDXE010000004.1 Genbank gene 179085 180137 . - . ID=gene-NND05_03830;Name=NND05_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03830 JANDXE010000004.1 Protein Homology CDS 179085 180137 . - 0 ID=cds-MCP9536693.1;Parent=gene-NND05_03830;Dbxref=NCBI_GP:MCP9536693.1;Name=MCP9536693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846936.1;locus_tag=NND05_03830;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9536693.1;transl_table=11 JANDXE010000004.1 Genbank gene 180393 181535 . - . ID=gene-NND05_03835;Name=NND05_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03835 JANDXE010000004.1 Protein Homology CDS 180393 181535 . - 0 ID=cds-MCP9536694.1;Parent=gene-NND05_03835;Dbxref=NCBI_GP:MCP9536694.1;Name=MCP9536694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345175.1;locus_tag=NND05_03835;product=aspartate aminotransferase family protein;protein_id=MCP9536694.1;transl_table=11 JANDXE010000004.1 Genbank gene 181645 182646 . - . ID=gene-NND05_03840;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NND05_03840 JANDXE010000004.1 Protein Homology CDS 181645 182646 . - 0 ID=cds-MCP9536695.1;Parent=gene-NND05_03840;Dbxref=NCBI_GP:MCP9536695.1;Name=MCP9536695.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968782.1;locus_tag=NND05_03840;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=MCP9536695.1;transl_table=11 JANDXE010000004.1 Genbank gene 182648 183850 . - . ID=gene-NND05_03845;Name=NND05_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03845 JANDXE010000004.1 Protein Homology CDS 182648 183850 . - 0 ID=cds-MCP9536696.1;Parent=gene-NND05_03845;Dbxref=NCBI_GP:MCP9536696.1;Name=MCP9536696.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847533.1;locus_tag=NND05_03845;product=argininosuccinate synthase;protein_id=MCP9536696.1;transl_table=11 JANDXE010000004.1 Genbank gene 183928 184533 . - . ID=gene-NND05_03850;Name=NND05_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03850 JANDXE010000004.1 Protein Homology CDS 183928 184533 . - 0 ID=cds-MCP9536697.1;Parent=gene-NND05_03850;Dbxref=NCBI_GP:MCP9536697.1;Name=MCP9536697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847532.1;locus_tag=NND05_03850;product=GNAT family N-acetyltransferase;protein_id=MCP9536697.1;transl_table=11 JANDXE010000004.1 Genbank gene 184598 185083 . - . ID=gene-NND05_03855;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=NND05_03855 JANDXE010000004.1 Protein Homology CDS 184598 185083 . - 0 ID=cds-MCP9536698.1;Parent=gene-NND05_03855;Dbxref=NCBI_GP:MCP9536698.1;Name=MCP9536698.1;Ontology_term=GO:0006525;gbkey=CDS;gene=argR;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847530.1;locus_tag=NND05_03855;product=arginine repressor;protein_id=MCP9536698.1;transl_table=11 JANDXE010000004.1 Genbank gene 185434 186798 . + . ID=gene-NND05_03860;Name=NND05_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03860 JANDXE010000004.1 Protein Homology CDS 185434 186798 . + 0 ID=cds-MCP9536699.1;Parent=gene-NND05_03860;Dbxref=NCBI_GP:MCP9536699.1;Name=MCP9536699.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378001.1;locus_tag=NND05_03860;product=glycosyl hydrolase family 28 protein;protein_id=MCP9536699.1;transl_table=11 JANDXE010000004.1 Genbank gene 186900 189881 . + . ID=gene-NND05_03865;Name=NND05_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03865 JANDXE010000004.1 Protein Homology CDS 186900 189881 . + 0 ID=cds-MCP9536700.1;Parent=gene-NND05_03865;Dbxref=NCBI_GP:MCP9536700.1;Name=MCP9536700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967654.1;locus_tag=NND05_03865;product=TonB-dependent receptor;protein_id=MCP9536700.1;transl_table=11 JANDXE010000004.1 Genbank gene 189894 191510 . + . ID=gene-NND05_03870;Name=NND05_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03870 JANDXE010000004.1 Protein Homology CDS 189894 191510 . + 0 ID=cds-MCP9536701.1;Parent=gene-NND05_03870;Dbxref=NCBI_GP:MCP9536701.1;Name=MCP9536701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845842.1;locus_tag=NND05_03870;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9536701.1;transl_table=11 JANDXE010000004.1 Genbank gene 192059 193843 . + . ID=gene-NND05_03875;Name=NND05_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03875 JANDXE010000004.1 GeneMarkS-2+ CDS 192059 193843 . + 0 ID=cds-MCP9536702.1;Parent=gene-NND05_03875;Dbxref=NCBI_GP:MCP9536702.1;Name=MCP9536702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03875;product=hypothetical protein;protein_id=MCP9536702.1;transl_table=11 JANDXE010000004.1 Genbank gene 193947 194570 . + . ID=gene-NND05_03880;Name=NND05_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03880 JANDXE010000004.1 Protein Homology CDS 193947 194570 . + 0 ID=cds-MCP9536703.1;Parent=gene-NND05_03880;Dbxref=NCBI_GP:MCP9536703.1;Name=MCP9536703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026080.2;locus_tag=NND05_03880;product=DUF4468 domain-containing protein;protein_id=MCP9536703.1;transl_table=11 JANDXE010000004.1 Genbank gene 194674 197340 . + . ID=gene-NND05_03885;Name=NND05_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03885 JANDXE010000004.1 Protein Homology CDS 194674 197340 . + 0 ID=cds-MCP9536704.1;Parent=gene-NND05_03885;Dbxref=NCBI_GP:MCP9536704.1;Name=MCP9536704.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464359.1;locus_tag=NND05_03885;product=GH92 family glycosyl hydrolase;protein_id=MCP9536704.1;transl_table=11 JANDXE010000004.1 Genbank gene 197368 200997 . + . ID=gene-NND05_03890;Name=NND05_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03890 JANDXE010000004.1 Protein Homology CDS 197368 200997 . + 0 ID=cds-MCP9536705.1;Parent=gene-NND05_03890;Dbxref=NCBI_GP:MCP9536705.1;Name=MCP9536705.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064126.1;locus_tag=NND05_03890;product=GH92 family glycosyl hydrolase;protein_id=MCP9536705.1;transl_table=11 JANDXE010000004.1 Genbank gene 201047 202075 . + . ID=gene-NND05_03895;Name=NND05_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03895 JANDXE010000004.1 Protein Homology CDS 201047 202075 . + 0 ID=cds-MCP9536706.1;Parent=gene-NND05_03895;Dbxref=NCBI_GP:MCP9536706.1;Name=MCP9536706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_03895;product=helix-turn-helix transcriptional regulator;protein_id=MCP9536706.1;transl_table=11 JANDXE010000004.1 Genbank gene 202379 203134 . - . ID=gene-NND05_03900;Name=NND05_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03900 JANDXE010000004.1 Protein Homology CDS 202379 203134 . - 0 ID=cds-MCP9536707.1;Parent=gene-NND05_03900;Dbxref=NCBI_GP:MCP9536707.1;Name=MCP9536707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847525.1;locus_tag=NND05_03900;product=Bax inhibitor-1/YccA family protein;protein_id=MCP9536707.1;transl_table=11 JANDXE010000004.1 Genbank gene 204347 204489 . + . ID=gene-NND05_03905;Name=NND05_03905;end_range=204489,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_03905;partial=true JANDXE010000004.1 cmsearch rRNA 204347 204489 . + . ID=rna-NND05_03905;Parent=gene-NND05_03905;Dbxref=RFAM:RF00177;end_range=204489,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03905;partial=true;product=16S ribosomal RNA JANDXE010000004.1 cmsearch exon 204347 204489 . + . ID=exon-NND05_03905-1;Parent=rna-NND05_03905;Dbxref=RFAM:RF00177;end_range=204489,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03905;partial=true;product=16S ribosomal RNA ##sequence-region JANDXE010000052.1 1 6981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000052.1 Genbank region 1 6981 . + . ID=JANDXE010000052.1:1..6981;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000052.1 Genbank gene 615 2591 . + . ID=gene-NND05_14815;Name=NND05_14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14815 JANDXE010000052.1 GeneMarkS-2+ CDS 615 2591 . + 0 ID=cds-MCP9538788.1;Parent=gene-NND05_14815;Dbxref=NCBI_GP:MCP9538788.1;Name=MCP9538788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14815;product=DUF5011 domain-containing protein;protein_id=MCP9538788.1;transl_table=11 JANDXE010000052.1 Genbank gene 2678 3811 . + . ID=gene-NND05_14820;Name=NND05_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14820 JANDXE010000052.1 Protein Homology CDS 2678 3811 . + 0 ID=cds-MCP9538789.1;Parent=gene-NND05_14820;Dbxref=NCBI_GP:MCP9538789.1;Name=MCP9538789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006282322.1;locus_tag=NND05_14820;product=OmpA family protein;protein_id=MCP9538789.1;transl_table=11 JANDXE010000052.1 Genbank gene 3921 5090 . + . ID=gene-NND05_14825;Name=NND05_14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14825 JANDXE010000052.1 GeneMarkS-2+ CDS 3921 5090 . + 0 ID=cds-MCP9538790.1;Parent=gene-NND05_14825;Dbxref=NCBI_GP:MCP9538790.1;Name=MCP9538790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14825;product=hypothetical protein;protein_id=MCP9538790.1;transl_table=11 JANDXE010000052.1 Genbank gene 5169 6221 . + . ID=gene-NND05_14830;Name=NND05_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14830 JANDXE010000052.1 GeneMarkS-2+ CDS 5169 6221 . + 0 ID=cds-MCP9538791.1;Parent=gene-NND05_14830;Dbxref=NCBI_GP:MCP9538791.1;Name=MCP9538791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14830;product=hypothetical protein;protein_id=MCP9538791.1;transl_table=11 JANDXE010000052.1 Genbank gene 6644 6981 . + . ID=gene-NND05_14835;Name=NND05_14835;end_range=6981,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_14835;partial=true JANDXE010000052.1 cmsearch rRNA 6644 6981 . + . ID=rna-NND05_14835;Parent=gene-NND05_14835;Dbxref=RFAM:RF00177;end_range=6981,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_14835;partial=true;product=16S ribosomal RNA JANDXE010000052.1 cmsearch exon 6644 6981 . + . ID=exon-NND05_14835-1;Parent=rna-NND05_14835;Dbxref=RFAM:RF00177;end_range=6981,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_14835;partial=true;product=16S ribosomal RNA ##sequence-region JANDXE010000053.1 1 6370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000053.1 Genbank region 1 6370 . + . ID=JANDXE010000053.1:1..6370;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000053.1 Genbank gene 1 342 . - . ID=gene-NND05_14840;Name=NND05_14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14840;partial=true;start_range=.,1 JANDXE010000053.1 GeneMarkS-2+ CDS 1 342 . - 0 ID=cds-MCP9538792.1;Parent=gene-NND05_14840;Dbxref=NCBI_GP:MCP9538792.1;Name=MCP9538792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14840;partial=true;product=hypothetical protein;protein_id=MCP9538792.1;start_range=.,1;transl_table=11 JANDXE010000053.1 Genbank gene 1424 2023 . + . ID=gene-NND05_14845;Name=NND05_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14845 JANDXE010000053.1 Protein Homology CDS 1424 2023 . + 0 ID=cds-MCP9538793.1;Parent=gene-NND05_14845;Dbxref=NCBI_GP:MCP9538793.1;Name=MCP9538793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846249.1;locus_tag=NND05_14845;product=DNA-binding protein;protein_id=MCP9538793.1;transl_table=11 JANDXE010000053.1 Genbank gene 2051 2155 . + . ID=gene-NND05_14850;Name=NND05_14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14850 JANDXE010000053.1 Protein Homology CDS 2051 2155 . + 0 ID=cds-MCP9538794.1;Parent=gene-NND05_14850;Dbxref=NCBI_GP:MCP9538794.1;Name=MCP9538794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_14850;product=smalltalk protein;protein_id=MCP9538794.1;transl_table=11 JANDXE010000053.1 Genbank gene 2209 2634 . + . ID=gene-NND05_14855;Name=NND05_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14855 JANDXE010000053.1 Protein Homology CDS 2209 2634 . + 0 ID=cds-MCP9538795.1;Parent=gene-NND05_14855;Dbxref=NCBI_GP:MCP9538795.1;Name=MCP9538795.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846248.1;locus_tag=NND05_14855;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MCP9538795.1;transl_table=11 JANDXE010000053.1 Genbank gene 2736 3182 . - . ID=gene-NND05_14860;Name=NND05_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14860 JANDXE010000053.1 Protein Homology CDS 2736 3182 . - 0 ID=cds-MCP9538796.1;Parent=gene-NND05_14860;Dbxref=NCBI_GP:MCP9538796.1;Name=MCP9538796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017375.1;locus_tag=NND05_14860;product=PepSY-like domain-containing protein;protein_id=MCP9538796.1;transl_table=11 JANDXE010000053.1 Genbank gene 3495 4784 . + . ID=gene-NND05_14865;Name=NND05_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14865 JANDXE010000053.1 Protein Homology CDS 3495 4784 . + 0 ID=cds-MCP9538797.1;Parent=gene-NND05_14865;Dbxref=NCBI_GP:MCP9538797.1;Name=MCP9538797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822191.1;locus_tag=NND05_14865;product=hypothetical protein;protein_id=MCP9538797.1;transl_table=11 JANDXE010000053.1 Genbank gene 4804 5865 . + . ID=gene-NND05_14870;Name=NND05_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14870 JANDXE010000053.1 Protein Homology CDS 4804 5865 . + 0 ID=cds-MCP9538798.1;Parent=gene-NND05_14870;Dbxref=NCBI_GP:MCP9538798.1;Name=MCP9538798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005811475.1;locus_tag=NND05_14870;product=hypothetical protein;protein_id=MCP9538798.1;transl_table=11 JANDXE010000053.1 Genbank gene 5976 6370 . + . ID=gene-NND05_14875;Name=NND05_14875;end_range=6370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14875;partial=true JANDXE010000053.1 Protein Homology CDS 5976 6370 . + 0 ID=cds-MCP9538799.1;Parent=gene-NND05_14875;Dbxref=NCBI_GP:MCP9538799.1;Name=MCP9538799.1;end_range=6370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574869.1;locus_tag=NND05_14875;partial=true;product=hypothetical protein;protein_id=MCP9538799.1;transl_table=11 ##sequence-region JANDXE010000054.1 1 6012 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000054.1 Genbank region 1 6012 . + . ID=JANDXE010000054.1:1..6012;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000054.1 Genbank gene 1 575 . + . ID=gene-NND05_14880;Name=NND05_14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14880;partial=true;start_range=.,1 JANDXE010000054.1 Protein Homology CDS 1 575 . + 2 ID=cds-MCP9538800.1;Parent=gene-NND05_14880;Dbxref=NCBI_GP:MCP9538800.1;Name=MCP9538800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028454.2;locus_tag=NND05_14880;partial=true;product=DUF5119 domain-containing protein;protein_id=MCP9538800.1;start_range=.,1;transl_table=11 JANDXE010000054.1 Genbank gene 686 1873 . + . ID=gene-NND05_14885;Name=NND05_14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14885 JANDXE010000054.1 Protein Homology CDS 686 1873 . + 0 ID=cds-MCP9538801.1;Parent=gene-NND05_14885;Dbxref=NCBI_GP:MCP9538801.1;Name=MCP9538801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14885;product=fimbrillin family protein;protein_id=MCP9538801.1;transl_table=11 JANDXE010000054.1 Genbank gene 2010 4751 . + . ID=gene-NND05_14890;Name=NND05_14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14890 JANDXE010000054.1 Protein Homology CDS 2010 4751 . + 0 ID=cds-MCP9538802.1;Parent=gene-NND05_14890;Dbxref=NCBI_GP:MCP9538802.1;Name=MCP9538802.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_14890;product=fimbrillin family protein;protein_id=MCP9538802.1;transl_table=11 JANDXE010000054.1 Genbank gene 5528 6012 . - . ID=gene-NND05_14895;Name=NND05_14895;end_range=6012,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14895;partial=true JANDXE010000054.1 GeneMarkS-2+ CDS 5528 6012 . - 2 ID=cds-MCP9538803.1;Parent=gene-NND05_14895;Dbxref=NCBI_GP:MCP9538803.1;Name=MCP9538803.1;end_range=6012,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14895;partial=true;product=hypothetical protein;protein_id=MCP9538803.1;transl_table=11 ##sequence-region JANDXE010000055.1 1 4947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000055.1 Genbank region 1 4947 . + . ID=JANDXE010000055.1:1..4947;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000055.1 Genbank gene 1 1775 . - . ID=gene-NND05_14900;Name=NND05_14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14900;partial=true;start_range=.,1 JANDXE010000055.1 Protein Homology CDS 1 1775 . - 0 ID=cds-MCP9538804.1;Parent=gene-NND05_14900;Dbxref=NCBI_GP:MCP9538804.1;Name=MCP9538804.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005812009.1;locus_tag=NND05_14900;partial=true;product=DNA topoisomerase;protein_id=MCP9538804.1;start_range=.,1;transl_table=11 JANDXE010000055.1 Genbank gene 1874 3532 . - . ID=gene-NND05_14905;Name=NND05_14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14905 JANDXE010000055.1 Protein Homology CDS 1874 3532 . - 0 ID=cds-MCP9538805.1;Parent=gene-NND05_14905;Dbxref=NCBI_GP:MCP9538805.1;Name=MCP9538805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014774670.1;locus_tag=NND05_14905;product=DUF4099 domain-containing protein;protein_id=MCP9538805.1;transl_table=11 JANDXE010000055.1 Genbank pseudogene 3564 3800 . - . ID=gene-NND05_14910;Name=NND05_14910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14910;pseudo=true JANDXE010000055.1 Protein Homology CDS 3564 3800 . - 0 ID=cds-NND05_14910;Parent=gene-NND05_14910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010538241.1;locus_tag=NND05_14910;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JANDXE010000055.1 Genbank gene 3920 4219 . - . ID=gene-NND05_14915;Name=NND05_14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14915 JANDXE010000055.1 Protein Homology CDS 3920 4219 . - 0 ID=cds-MCP9538806.1;Parent=gene-NND05_14915;Dbxref=NCBI_GP:MCP9538806.1;Name=MCP9538806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=NND05_14915;product=helix-turn-helix domain-containing protein;protein_id=MCP9538806.1;transl_table=11 JANDXE010000055.1 Genbank gene 4461 4748 . + . ID=gene-NND05_14920;Name=NND05_14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14920 JANDXE010000055.1 Protein Homology CDS 4461 4748 . + 0 ID=cds-MCP9538807.1;Parent=gene-NND05_14920;Dbxref=NCBI_GP:MCP9538807.1;Name=MCP9538807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008645702.1;locus_tag=NND05_14920;product=helix-turn-helix domain-containing protein;protein_id=MCP9538807.1;transl_table=11 ##sequence-region JANDXE010000056.1 1 4608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000056.1 Genbank region 1 4608 . + . ID=JANDXE010000056.1:1..4608;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000056.1 Genbank gene 76 747 . + . ID=gene-NND05_14925;Name=NND05_14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14925 JANDXE010000056.1 Protein Homology CDS 76 747 . + 0 ID=cds-MCP9538808.1;Parent=gene-NND05_14925;Dbxref=NCBI_GP:MCP9538808.1;Name=MCP9538808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007174549.1;locus_tag=NND05_14925;product=hypothetical protein;protein_id=MCP9538808.1;transl_table=11 JANDXE010000056.1 Genbank pseudogene 785 1066 . - . ID=gene-NND05_14930;Name=NND05_14930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14930;pseudo=true JANDXE010000056.1 Protein Homology CDS 785 1066 . - 0 ID=cds-NND05_14930;Parent=gene-NND05_14930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899402.1;locus_tag=NND05_14930;product=hypothetical protein;pseudo=true;transl_table=11 JANDXE010000056.1 Genbank pseudogene 1078 1242 . + . ID=gene-NND05_14935;Name=NND05_14935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14935;pseudo=true JANDXE010000056.1 Protein Homology CDS 1078 1242 . + 0 ID=cds-NND05_14935;Parent=gene-NND05_14935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007833457.1;locus_tag=NND05_14935;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 JANDXE010000056.1 Genbank pseudogene 1247 1333 . + . ID=gene-NND05_14940;Name=NND05_14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14940;pseudo=true JANDXE010000056.1 Protein Homology CDS 1247 1333 . + 0 ID=cds-NND05_14940;Parent=gene-NND05_14940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007659510.1;locus_tag=NND05_14940;product=DNA resolvase;pseudo=true;transl_table=11 JANDXE010000056.1 Genbank pseudogene 1569 1679 . + . ID=gene-NND05_14945;Name=NND05_14945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14945;pseudo=true JANDXE010000056.1 Protein Homology CDS 1569 1679 . + 0 ID=cds-NND05_14945;Parent=gene-NND05_14945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899410.1;locus_tag=NND05_14945;product=ORF6N domain-containing protein;pseudo=true;transl_table=11 JANDXE010000056.1 Genbank gene 1760 2239 . + . ID=gene-NND05_14950;Name=NND05_14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14950 JANDXE010000056.1 GeneMarkS-2+ CDS 1760 2239 . + 0 ID=cds-MCP9538809.1;Parent=gene-NND05_14950;Dbxref=NCBI_GP:MCP9538809.1;Name=MCP9538809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14950;product=hypothetical protein;protein_id=MCP9538809.1;transl_table=11 JANDXE010000056.1 Genbank gene 2279 3178 . + . ID=gene-NND05_14955;Name=NND05_14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14955 JANDXE010000056.1 GeneMarkS-2+ CDS 2279 3178 . + 0 ID=cds-MCP9538810.1;Parent=gene-NND05_14955;Dbxref=NCBI_GP:MCP9538810.1;Name=MCP9538810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14955;product=hypothetical protein;protein_id=MCP9538810.1;transl_table=11 JANDXE010000056.1 Genbank gene 3469 3894 . + . ID=gene-NND05_14960;Name=NND05_14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14960 JANDXE010000056.1 GeneMarkS-2+ CDS 3469 3894 . + 0 ID=cds-MCP9538811.1;Parent=gene-NND05_14960;Dbxref=NCBI_GP:MCP9538811.1;Name=MCP9538811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14960;product=hypothetical protein;protein_id=MCP9538811.1;transl_table=11 JANDXE010000056.1 Genbank gene 4088 4357 . + . ID=gene-NND05_14965;Name=NND05_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14965 JANDXE010000056.1 GeneMarkS-2+ CDS 4088 4357 . + 0 ID=cds-MCP9538812.1;Parent=gene-NND05_14965;Dbxref=NCBI_GP:MCP9538812.1;Name=MCP9538812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14965;product=hypothetical protein;protein_id=MCP9538812.1;transl_table=11 JANDXE010000056.1 Genbank gene 4429 4608 . + . ID=gene-NND05_14970;Name=NND05_14970;end_range=4608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14970;partial=true JANDXE010000056.1 GeneMarkS-2+ CDS 4429 4608 . + 0 ID=cds-MCP9538813.1;Parent=gene-NND05_14970;Dbxref=NCBI_GP:MCP9538813.1;Name=MCP9538813.1;end_range=4608,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_14970;partial=true;product=hypothetical protein;protein_id=MCP9538813.1;transl_table=11 ##sequence-region JANDXE010000057.1 1 2325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000057.1 Genbank region 1 2325 . + . ID=JANDXE010000057.1:1..2325;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000057.1 Genbank gene 782 2068 . - . ID=gene-NND05_14975;Name=NND05_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14975 JANDXE010000057.1 Protein Homology CDS 782 2068 . - 0 ID=cds-MCP9538814.1;Parent=gene-NND05_14975;Dbxref=NCBI_GP:MCP9538814.1;Name=MCP9538814.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611162.1;locus_tag=NND05_14975;product=IS1380 family transposase;protein_id=MCP9538814.1;transl_table=11 JANDXE010000057.1 Genbank gene 2220 2325 . + . ID=gene-NND05_14980;Name=NND05_14980;end_range=2325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14980;partial=true JANDXE010000057.1 Protein Homology CDS 2220 2325 . + 0 ID=cds-MCP9538815.1;Parent=gene-NND05_14980;Dbxref=NCBI_GP:MCP9538815.1;Name=MCP9538815.1;end_range=2325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_057280848.1;locus_tag=NND05_14980;partial=true;product=CfxA family class A extended-spectrum beta-lactamase;protein_id=MCP9538815.1;transl_table=11 ##sequence-region JANDXE010000058.1 1 1865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000058.1 Genbank region 1 1865 . + . ID=JANDXE010000058.1:1..1865;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000058.1 Genbank gene 92 1057 . + . ID=gene-NND05_14985;Name=NND05_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14985 JANDXE010000058.1 Protein Homology CDS 92 1057 . + 0 ID=cds-MCP9538816.1;Parent=gene-NND05_14985;Dbxref=NCBI_GP:MCP9538816.1;Name=MCP9538816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_057280848.1;locus_tag=NND05_14985;product=extended-spectrum class A beta-lactamase CfxA3;protein_id=MCP9538816.1;transl_table=11 JANDXE010000058.1 Genbank pseudogene 1150 1515 . - . ID=gene-NND05_14990;Name=NND05_14990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_14990;pseudo=true JANDXE010000058.1 Protein Homology CDS 1150 1515 . - 0 ID=cds-NND05_14990;Parent=gene-NND05_14990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004292734.1;locus_tag=NND05_14990;product=mobilization protein;pseudo=true;transl_table=11 JANDXE010000058.1 Genbank gene 1776 1865 . - . ID=gene-NND05_14995;Name=NND05_14995;end_range=1865,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_14995;partial=true JANDXE010000058.1 Protein Homology CDS 1776 1865 . - 0 ID=cds-MCP9538817.1;Parent=gene-NND05_14995;Dbxref=NCBI_GP:MCP9538817.1;Name=MCP9538817.1;end_range=1865,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656561.1;locus_tag=NND05_14995;partial=true;product=DUF3408 domain-containing protein;protein_id=MCP9538817.1;transl_table=11 ##sequence-region JANDXE010000059.1 1 3728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000059.1 Genbank region 1 3728 . + . ID=JANDXE010000059.1:1..3728;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000059.1 Genbank gene 18 146 . + . ID=gene-NND05_15000;Name=NND05_15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15000 JANDXE010000059.1 Protein Homology CDS 18 146 . + 0 ID=cds-MCP9538818.1;Parent=gene-NND05_15000;Dbxref=NCBI_GP:MCP9538818.1;Name=MCP9538818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025419.2;locus_tag=NND05_15000;product=DUF4248 domain-containing protein;protein_id=MCP9538818.1;transl_table=11 JANDXE010000059.1 Genbank gene 323 1933 . - . ID=gene-NND05_15005;Name=NND05_15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15005 JANDXE010000059.1 Protein Homology CDS 323 1933 . - 0 ID=cds-MCP9538819.1;Parent=gene-NND05_15005;Dbxref=NCBI_GP:MCP9538819.1;Name=MCP9538819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848291.1;locus_tag=NND05_15005;product=ATP-binding protein;protein_id=MCP9538819.1;transl_table=11 JANDXE010000059.1 Genbank gene 2094 3386 . - . ID=gene-NND05_15010;Name=NND05_15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15010 JANDXE010000059.1 Protein Homology CDS 2094 3386 . - 0 ID=cds-MCP9538820.1;Parent=gene-NND05_15010;Dbxref=NCBI_GP:MCP9538820.1;Name=MCP9538820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007902673.1;locus_tag=NND05_15010;product=hypothetical protein;protein_id=MCP9538820.1;transl_table=11 ##sequence-region JANDXE010000060.1 1 3646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000060.1 Genbank region 1 3646 . + . ID=JANDXE010000060.1:1..3646;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000060.1 Genbank gene 1 213 . + . ID=gene-NND05_15015;Name=NND05_15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15015;partial=true;start_range=.,1 JANDXE010000060.1 GeneMarkS-2+ CDS 1 213 . + 0 ID=cds-MCP9538821.1;Parent=gene-NND05_15015;Dbxref=NCBI_GP:MCP9538821.1;Name=MCP9538821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15015;partial=true;product=hypothetical protein;protein_id=MCP9538821.1;start_range=.,1;transl_table=11 JANDXE010000060.1 Genbank gene 602 1225 . + . ID=gene-NND05_15020;Name=NND05_15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15020 JANDXE010000060.1 GeneMarkS-2+ CDS 602 1225 . + 0 ID=cds-MCP9538822.1;Parent=gene-NND05_15020;Dbxref=NCBI_GP:MCP9538822.1;Name=MCP9538822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15020;product=hypothetical protein;protein_id=MCP9538822.1;transl_table=11 JANDXE010000060.1 Genbank gene 1478 1918 . + . ID=gene-NND05_15025;Name=NND05_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15025 JANDXE010000060.1 Protein Homology CDS 1478 1918 . + 0 ID=cds-MCP9538823.1;Parent=gene-NND05_15025;Dbxref=NCBI_GP:MCP9538823.1;Name=MCP9538823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173556.1;locus_tag=NND05_15025;product=hypothetical protein;protein_id=MCP9538823.1;transl_table=11 JANDXE010000060.1 Genbank gene 2077 2283 . - . ID=gene-NND05_15030;Name=NND05_15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15030 JANDXE010000060.1 Protein Homology CDS 2077 2283 . - 0 ID=cds-MCP9538824.1;Parent=gene-NND05_15030;Dbxref=NCBI_GP:MCP9538824.1;Name=MCP9538824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016087.2;locus_tag=NND05_15030;product=copper resistance protein NlpE;protein_id=MCP9538824.1;transl_table=11 JANDXE010000060.1 Genbank gene 2666 3418 . - . ID=gene-NND05_15035;Name=NND05_15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15035 JANDXE010000060.1 Protein Homology CDS 2666 3418 . - 0 ID=cds-MCP9538825.1;Parent=gene-NND05_15035;Dbxref=NCBI_GP:MCP9538825.1;Name=MCP9538825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900057.1;locus_tag=NND05_15035;product=hypothetical protein;protein_id=MCP9538825.1;transl_table=11 JANDXE010000060.1 Genbank gene 3454 3646 . - . ID=gene-NND05_15040;Name=NND05_15040;end_range=3646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15040;partial=true JANDXE010000060.1 Protein Homology CDS 3454 3646 . - 1 ID=cds-MCP9538826.1;Parent=gene-NND05_15040;Dbxref=NCBI_GP:MCP9538826.1;Name=MCP9538826.1;end_range=3646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656563.1;locus_tag=NND05_15040;partial=true;product=mobilization protein;protein_id=MCP9538826.1;transl_table=11 ##sequence-region JANDXE010000061.1 1 3329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000061.1 Genbank region 1 3329 . + . ID=JANDXE010000061.1:1..3329;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000061.1 Genbank gene 1 634 . - . ID=gene-NND05_15045;Name=NND05_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15045;partial=true;start_range=.,1 JANDXE010000061.1 Protein Homology CDS 1 634 . - 0 ID=cds-MCP9538827.1;Parent=gene-NND05_15045;Dbxref=NCBI_GP:MCP9538827.1;Name=MCP9538827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337707.1;locus_tag=NND05_15045;partial=true;product=phage integrase SAM-like domain and Arm DNA-binding domain-containing protein;protein_id=MCP9538827.1;start_range=.,1;transl_table=11 JANDXE010000061.1 Genbank gene 896 1558 . - . ID=gene-NND05_15050;Name=NND05_15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15050 JANDXE010000061.1 GeneMarkS-2+ CDS 896 1558 . - 0 ID=cds-MCP9538828.1;Parent=gene-NND05_15050;Dbxref=NCBI_GP:MCP9538828.1;Name=MCP9538828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15050;product=hypothetical protein;protein_id=MCP9538828.1;transl_table=11 JANDXE010000061.1 Genbank gene 2311 2907 . + . ID=gene-NND05_15055;Name=NND05_15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15055 JANDXE010000061.1 Protein Homology CDS 2311 2907 . + 0 ID=cds-MCP9538829.1;Parent=gene-NND05_15055;Dbxref=NCBI_GP:MCP9538829.1;Name=MCP9538829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847339.1;locus_tag=NND05_15055;product=DNA-binding protein;protein_id=MCP9538829.1;transl_table=11 JANDXE010000061.1 Genbank gene 2940 3035 . + . ID=gene-NND05_15060;Name=NND05_15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15060 JANDXE010000061.1 Protein Homology CDS 2940 3035 . + 0 ID=cds-MCP9538830.1;Parent=gene-NND05_15060;Dbxref=NCBI_GP:MCP9538830.1;Name=MCP9538830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033879.1;locus_tag=NND05_15060;product=smalltalk protein;protein_id=MCP9538830.1;transl_table=11 ##sequence-region JANDXE010000062.1 1 3304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000062.1 Genbank region 1 3304 . + . ID=JANDXE010000062.1:1..3304;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000062.1 Genbank gene 169 531 . - . ID=gene-NND05_15065;Name=NND05_15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15065 JANDXE010000062.1 Protein Homology CDS 169 531 . - 0 ID=cds-MCP9538831.1;Parent=gene-NND05_15065;Dbxref=NCBI_GP:MCP9538831.1;Name=MCP9538831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628592.1;locus_tag=NND05_15065;product=hypothetical protein;protein_id=MCP9538831.1;transl_table=11 JANDXE010000062.1 Genbank gene 528 1751 . - . ID=gene-NND05_15070;Name=NND05_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15070 JANDXE010000062.1 Protein Homology CDS 528 1751 . - 0 ID=cds-MCP9538832.1;Parent=gene-NND05_15070;Dbxref=NCBI_GP:MCP9538832.1;Name=MCP9538832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656556.1;locus_tag=NND05_15070;product=site-specific integrase;protein_id=MCP9538832.1;transl_table=11 JANDXE010000062.1 Genbank gene 1783 3012 . - . ID=gene-NND05_15075;Name=NND05_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15075 JANDXE010000062.1 Protein Homology CDS 1783 3012 . - 0 ID=cds-MCP9538833.1;Parent=gene-NND05_15075;Dbxref=NCBI_GP:MCP9538833.1;Name=MCP9538833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004289244.1;locus_tag=NND05_15075;product=site-specific integrase;protein_id=MCP9538833.1;transl_table=11 ##sequence-region JANDXE010000005.1 1 156321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000005.1 Genbank region 1 156321 . + . ID=JANDXE010000005.1:1..156321;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000005.1 Genbank gene 1 179 . + . ID=gene-NND05_03910;Name=NND05_03910;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_03910;partial=true;start_range=.,1 JANDXE010000005.1 cmsearch rRNA 1 179 . + . ID=rna-NND05_03910;Parent=gene-NND05_03910;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03910;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000005.1 cmsearch exon 1 179 . + . ID=exon-NND05_03910-1;Parent=rna-NND05_03910;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03910;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000005.1 Genbank gene 284 396 . + . ID=gene-NND05_03915;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NND05_03915 JANDXE010000005.1 cmsearch rRNA 284 396 . + . ID=rna-NND05_03915;Parent=gene-NND05_03915;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03915;product=5S ribosomal RNA JANDXE010000005.1 cmsearch exon 284 396 . + . ID=exon-NND05_03915-1;Parent=rna-NND05_03915;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_03915;product=5S ribosomal RNA JANDXE010000005.1 Genbank gene 646 2943 . - . ID=gene-NND05_03920;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NND05_03920 JANDXE010000005.1 Protein Homology CDS 646 2943 . - 0 ID=cds-MCP9536708.1;Parent=gene-NND05_03920;Dbxref=NCBI_GP:MCP9536708.1;Name=MCP9536708.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848159.1;locus_tag=NND05_03920;product=ribonuclease R;protein_id=MCP9536708.1;transl_table=11 JANDXE010000005.1 Genbank gene 3287 4996 . + . ID=gene-NND05_03925;Name=NND05_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03925 JANDXE010000005.1 Protein Homology CDS 3287 4996 . + 0 ID=cds-MCP9536709.1;Parent=gene-NND05_03925;Dbxref=NCBI_GP:MCP9536709.1;Name=MCP9536709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823329.1;locus_tag=NND05_03925;product=Na/Pi cotransporter family protein;protein_id=MCP9536709.1;transl_table=11 JANDXE010000005.1 Genbank gene 5196 5894 . - . ID=gene-NND05_03930;Name=NND05_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03930 JANDXE010000005.1 Protein Homology CDS 5196 5894 . - 0 ID=cds-MCP9536710.1;Parent=gene-NND05_03930;Dbxref=NCBI_GP:MCP9536710.1;Name=MCP9536710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344709.1;locus_tag=NND05_03930;product=NAD-dependent deacylase;protein_id=MCP9536710.1;transl_table=11 JANDXE010000005.1 Genbank gene 6070 6672 . + . ID=gene-NND05_03935;Name=NND05_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03935 JANDXE010000005.1 Protein Homology CDS 6070 6672 . + 0 ID=cds-MCP9536711.1;Parent=gene-NND05_03935;Dbxref=NCBI_GP:MCP9536711.1;Name=MCP9536711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378330.1;locus_tag=NND05_03935;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9536711.1;transl_table=11 JANDXE010000005.1 Genbank gene 6707 7582 . + . ID=gene-NND05_03940;Name=NND05_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03940 JANDXE010000005.1 Protein Homology CDS 6707 7582 . + 0 ID=cds-MCP9536712.1;Parent=gene-NND05_03940;Dbxref=NCBI_GP:MCP9536712.1;Name=MCP9536712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375451.1;locus_tag=NND05_03940;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9536712.1;transl_table=11 JANDXE010000005.1 Genbank gene 7623 8597 . + . ID=gene-NND05_03945;Name=NND05_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03945 JANDXE010000005.1 Protein Homology CDS 7623 8597 . + 0 ID=cds-MCP9536713.1;Parent=gene-NND05_03945;Dbxref=NCBI_GP:MCP9536713.1;Name=MCP9536713.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009230650.1;locus_tag=NND05_03945;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MCP9536713.1;transl_table=11 JANDXE010000005.1 Genbank gene 8773 9240 . + . ID=gene-NND05_03950;Name=NND05_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03950 JANDXE010000005.1 Protein Homology CDS 8773 9240 . + 0 ID=cds-MCP9536714.1;Parent=gene-NND05_03950;Dbxref=NCBI_GP:MCP9536714.1;Name=MCP9536714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343614.1;locus_tag=NND05_03950;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=MCP9536714.1;transl_table=11 JANDXE010000005.1 Genbank gene 9266 11014 . + . ID=gene-NND05_03955;Name=NND05_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03955 JANDXE010000005.1 Protein Homology CDS 9266 11014 . + 0 ID=cds-MCP9536715.1;Parent=gene-NND05_03955;Dbxref=NCBI_GP:MCP9536715.1;Name=MCP9536715.1;Ontology_term=GO:0006508,GO:0070573;gbkey=CDS;go_function=metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845402.1;locus_tag=NND05_03955;product=membrane dipeptidase;protein_id=MCP9536715.1;transl_table=11 JANDXE010000005.1 Genbank gene 11019 12050 . + . ID=gene-NND05_03960;Name=NND05_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03960 JANDXE010000005.1 Protein Homology CDS 11019 12050 . + 0 ID=cds-MCP9536716.1;Parent=gene-NND05_03960;Dbxref=NCBI_GP:MCP9536716.1;Name=MCP9536716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375442.1;locus_tag=NND05_03960;product=M28 family peptidase;protein_id=MCP9536716.1;transl_table=11 JANDXE010000005.1 Genbank gene 12475 13155 . - . ID=gene-NND05_03965;Name=NND05_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03965 JANDXE010000005.1 Protein Homology CDS 12475 13155 . - 0 ID=cds-MCP9536717.1;Parent=gene-NND05_03965;Dbxref=NCBI_GP:MCP9536717.1;Name=MCP9536717.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_03965;product=response regulator transcription factor;protein_id=MCP9536717.1;transl_table=11 JANDXE010000005.1 Genbank gene 13174 14532 . - . ID=gene-NND05_03970;Name=NND05_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03970 JANDXE010000005.1 Protein Homology CDS 13174 14532 . - 0 ID=cds-MCP9536718.1;Parent=gene-NND05_03970;Dbxref=NCBI_GP:MCP9536718.1;Name=MCP9536718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_03970;product=HAMP domain-containing histidine kinase;protein_id=MCP9536718.1;transl_table=11 JANDXE010000005.1 Genbank gene 15304 16422 . + . ID=gene-NND05_03975;Name=NND05_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03975 JANDXE010000005.1 GeneMarkS-2+ CDS 15304 16422 . + 0 ID=cds-MCP9536719.1;Parent=gene-NND05_03975;Dbxref=NCBI_GP:MCP9536719.1;Name=MCP9536719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03975;product=hypothetical protein;protein_id=MCP9536719.1;transl_table=11 JANDXE010000005.1 Genbank gene 16424 17461 . + . ID=gene-NND05_03980;Name=NND05_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03980 JANDXE010000005.1 GeneMarkS-2+ CDS 16424 17461 . + 0 ID=cds-MCP9536720.1;Parent=gene-NND05_03980;Dbxref=NCBI_GP:MCP9536720.1;Name=MCP9536720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_03980;product=hypothetical protein;protein_id=MCP9536720.1;transl_table=11 JANDXE010000005.1 Genbank gene 17469 18674 . + . ID=gene-NND05_03985;Name=NND05_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03985 JANDXE010000005.1 Protein Homology CDS 17469 18674 . + 0 ID=cds-MCP9536721.1;Parent=gene-NND05_03985;Dbxref=NCBI_GP:MCP9536721.1;Name=MCP9536721.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012703.2;locus_tag=NND05_03985;product=arginase family protein;protein_id=MCP9536721.1;transl_table=11 JANDXE010000005.1 Genbank gene 18688 21003 . + . ID=gene-NND05_03990;Name=NND05_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03990 JANDXE010000005.1 Protein Homology CDS 18688 21003 . + 0 ID=cds-MCP9536722.1;Parent=gene-NND05_03990;Dbxref=NCBI_GP:MCP9536722.1;Name=MCP9536722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_03990;product=outer membrane beta-barrel protein;protein_id=MCP9536722.1;transl_table=11 JANDXE010000005.1 Genbank gene 21003 23204 . + . ID=gene-NND05_03995;Name=NND05_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_03995 JANDXE010000005.1 Protein Homology CDS 21003 23204 . + 0 ID=cds-MCP9536723.1;Parent=gene-NND05_03995;Dbxref=NCBI_GP:MCP9536723.1;Name=MCP9536723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366814.1;locus_tag=NND05_03995;product=peptidase domain-containing ABC transporter;protein_id=MCP9536723.1;transl_table=11 JANDXE010000005.1 Genbank gene 23276 23914 . - . ID=gene-NND05_04000;Name=NND05_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04000 JANDXE010000005.1 Protein Homology CDS 23276 23914 . - 0 ID=cds-MCP9536724.1;Parent=gene-NND05_04000;Dbxref=NCBI_GP:MCP9536724.1;Name=MCP9536724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848148.1;locus_tag=NND05_04000;product=DUF4294 domain-containing protein;protein_id=MCP9536724.1;transl_table=11 JANDXE010000005.1 Genbank gene 24122 26194 . + . ID=gene-NND05_04005;Name=NND05_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04005 JANDXE010000005.1 Protein Homology CDS 24122 26194 . + 0 ID=cds-MCP9536725.1;Parent=gene-NND05_04005;Dbxref=NCBI_GP:MCP9536725.1;Name=MCP9536725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848147.1;locus_tag=NND05_04005;product=helix-hairpin-helix domain-containing protein;protein_id=MCP9536725.1;transl_table=11 JANDXE010000005.1 Genbank gene 26361 27290 . + . ID=gene-NND05_04010;Name=NND05_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04010 JANDXE010000005.1 Protein Homology CDS 26361 27290 . + 0 ID=cds-MCP9536726.1;Parent=gene-NND05_04010;Dbxref=NCBI_GP:MCP9536726.1;Name=MCP9536726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848145.1;locus_tag=NND05_04010;product=glycosyltransferase family 2 protein;protein_id=MCP9536726.1;transl_table=11 JANDXE010000005.1 Genbank gene 27386 29092 . - . ID=gene-NND05_04015;Name=NND05_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04015 JANDXE010000005.1 Protein Homology CDS 27386 29092 . - 0 ID=cds-MCP9536727.1;Parent=gene-NND05_04015;Dbxref=NCBI_GP:MCP9536727.1;Name=MCP9536727.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=NND05_04015;product=glycosyltransferase family 39 protein;protein_id=MCP9536727.1;transl_table=11 JANDXE010000005.1 Genbank gene 29234 31174 . + . ID=gene-NND05_04020;Name=NND05_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04020 JANDXE010000005.1 Protein Homology CDS 29234 31174 . + 0 ID=cds-MCP9536728.1;Parent=gene-NND05_04020;Dbxref=NCBI_GP:MCP9536728.1;Name=MCP9536728.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573288.1;locus_tag=NND05_04020;product=sulfatase-like hydrolase/transferase;protein_id=MCP9536728.1;transl_table=11 JANDXE010000005.1 Genbank gene 31262 31705 . - . ID=gene-NND05_04025;Name=NND05_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04025 JANDXE010000005.1 GeneMarkS-2+ CDS 31262 31705 . - 0 ID=cds-MCP9536729.1;Parent=gene-NND05_04025;Dbxref=NCBI_GP:MCP9536729.1;Name=MCP9536729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04025;product=hypothetical protein;protein_id=MCP9536729.1;transl_table=11 JANDXE010000005.1 Genbank gene 32079 32627 . + . ID=gene-NND05_04030;Name=NND05_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04030 JANDXE010000005.1 GeneMarkS-2+ CDS 32079 32627 . + 0 ID=cds-MCP9536730.1;Parent=gene-NND05_04030;Dbxref=NCBI_GP:MCP9536730.1;Name=MCP9536730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04030;product=hypothetical protein;protein_id=MCP9536730.1;transl_table=11 JANDXE010000005.1 Genbank gene 32683 33435 . + . ID=gene-NND05_04035;Name=NND05_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04035 JANDXE010000005.1 Protein Homology CDS 32683 33435 . + 0 ID=cds-MCP9536731.1;Parent=gene-NND05_04035;Dbxref=NCBI_GP:MCP9536731.1;Name=MCP9536731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848130.1;locus_tag=NND05_04035;product=lipopolysaccharide kinase InaA family protein;protein_id=MCP9536731.1;transl_table=11 JANDXE010000005.1 Genbank gene 33583 35148 . - . ID=gene-NND05_04040;Name=NND05_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04040 JANDXE010000005.1 Protein Homology CDS 33583 35148 . - 0 ID=cds-MCP9536732.1;Parent=gene-NND05_04040;Dbxref=NCBI_GP:MCP9536732.1;Name=MCP9536732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.1;locus_tag=NND05_04040;product=DUF6056 family protein;protein_id=MCP9536732.1;transl_table=11 JANDXE010000005.1 Genbank gene 35393 36346 . + . ID=gene-NND05_04045;Name=NND05_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04045 JANDXE010000005.1 Protein Homology CDS 35393 36346 . + 0 ID=cds-MCP9536733.1;Parent=gene-NND05_04045;Dbxref=NCBI_GP:MCP9536733.1;Name=MCP9536733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013652.2;locus_tag=NND05_04045;product=glycosyltransferase family 8 protein;protein_id=MCP9536733.1;transl_table=11 JANDXE010000005.1 Genbank gene 36365 37066 . + . ID=gene-NND05_04050;Name=NND05_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04050 JANDXE010000005.1 Protein Homology CDS 36365 37066 . + 0 ID=cds-MCP9536734.1;Parent=gene-NND05_04050;Dbxref=NCBI_GP:MCP9536734.1;Name=MCP9536734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848126.1;locus_tag=NND05_04050;product=glycosyltransferase;protein_id=MCP9536734.1;transl_table=11 JANDXE010000005.1 Genbank gene 37110 38144 . - . ID=gene-NND05_04055;Name=NND05_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04055 JANDXE010000005.1 Protein Homology CDS 37110 38144 . - 0 ID=cds-MCP9536735.1;Parent=gene-NND05_04055;Dbxref=NCBI_GP:MCP9536735.1;Name=MCP9536735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848123.1;locus_tag=NND05_04055;product=galactofuranosyltransferase;protein_id=MCP9536735.1;transl_table=11 JANDXE010000005.1 Genbank gene 38181 39107 . - . ID=gene-NND05_04060;Name=NND05_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04060 JANDXE010000005.1 Protein Homology CDS 38181 39107 . - 0 ID=cds-MCP9536736.1;Parent=gene-NND05_04060;Dbxref=NCBI_GP:MCP9536736.1;Name=MCP9536736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848120.1;locus_tag=NND05_04060;product=lysophospholipid acyltransferase family protein;protein_id=MCP9536736.1;transl_table=11 JANDXE010000005.1 Genbank gene 39149 41002 . - . ID=gene-NND05_04065;Name=NND05_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04065 JANDXE010000005.1 Protein Homology CDS 39149 41002 . - 0 ID=cds-MCP9536737.1;Parent=gene-NND05_04065;Dbxref=NCBI_GP:MCP9536737.1;Name=MCP9536737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910904.1;locus_tag=NND05_04065;product=ABC transporter ATP-binding protein/permease;protein_id=MCP9536737.1;transl_table=11 JANDXE010000005.1 Genbank gene 41096 42430 . - . ID=gene-NND05_04070;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NND05_04070 JANDXE010000005.1 Protein Homology CDS 41096 42430 . - 0 ID=cds-MCP9536738.1;Parent=gene-NND05_04070;Dbxref=NCBI_GP:MCP9536738.1;Name=MCP9536738.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848118.1;locus_tag=NND05_04070;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=MCP9536738.1;transl_table=11 JANDXE010000005.1 Genbank gene 42501 43454 . - . ID=gene-NND05_04075;Name=NND05_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04075 JANDXE010000005.1 Protein Homology CDS 42501 43454 . - 0 ID=cds-MCP9536739.1;Parent=gene-NND05_04075;Dbxref=NCBI_GP:MCP9536739.1;Name=MCP9536739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283409.1;locus_tag=NND05_04075;product=phosphatase PAP2 family protein;protein_id=MCP9536739.1;transl_table=11 JANDXE010000005.1 Genbank gene 43472 44467 . - . ID=gene-NND05_04080;Name=NND05_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04080 JANDXE010000005.1 Protein Homology CDS 43472 44467 . - 0 ID=cds-MCP9536740.1;Parent=gene-NND05_04080;Dbxref=NCBI_GP:MCP9536740.1;Name=MCP9536740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411481.1;locus_tag=NND05_04080;product=NAD(P)-dependent oxidoreductase;protein_id=MCP9536740.1;transl_table=11 JANDXE010000005.1 Genbank gene 44667 45866 . + . ID=gene-NND05_04085;Name=NND05_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04085 JANDXE010000005.1 Protein Homology CDS 44667 45866 . + 0 ID=cds-MCP9536741.1;Parent=gene-NND05_04085;Dbxref=NCBI_GP:MCP9536741.1;Name=MCP9536741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=NND05_04085;product=serine/threonine protein kinase;protein_id=MCP9536741.1;transl_table=11 JANDXE010000005.1 Genbank gene 45922 47655 . - . ID=gene-NND05_04090;Name=NND05_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04090 JANDXE010000005.1 GeneMarkS-2+ CDS 45922 47655 . - 0 ID=cds-MCP9536742.1;Parent=gene-NND05_04090;Dbxref=NCBI_GP:MCP9536742.1;Name=MCP9536742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04090;product=hypothetical protein;protein_id=MCP9536742.1;transl_table=11 JANDXE010000005.1 Genbank gene 47850 48026 . + . ID=gene-NND05_04095;Name=NND05_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04095 JANDXE010000005.1 GeneMarkS-2+ CDS 47850 48026 . + 0 ID=cds-MCP9536743.1;Parent=gene-NND05_04095;Dbxref=NCBI_GP:MCP9536743.1;Name=MCP9536743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04095;product=hypothetical protein;protein_id=MCP9536743.1;transl_table=11 JANDXE010000005.1 Genbank gene 48030 48599 . + . ID=gene-NND05_04100;Name=NND05_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04100 JANDXE010000005.1 GeneMarkS-2+ CDS 48030 48599 . + 0 ID=cds-MCP9536744.1;Parent=gene-NND05_04100;Dbxref=NCBI_GP:MCP9536744.1;Name=MCP9536744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04100;product=hypothetical protein;protein_id=MCP9536744.1;transl_table=11 JANDXE010000005.1 Genbank gene 48721 50430 . - . ID=gene-NND05_04105;Name=NND05_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04105 JANDXE010000005.1 Protein Homology CDS 48721 50430 . - 0 ID=cds-MCP9536745.1;Parent=gene-NND05_04105;Dbxref=NCBI_GP:MCP9536745.1;Name=MCP9536745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264239.1;locus_tag=NND05_04105;product=Na/Pi cotransporter family protein;protein_id=MCP9536745.1;transl_table=11 JANDXE010000005.1 Genbank gene 50602 52263 . + . ID=gene-NND05_04110;Name=NND05_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04110 JANDXE010000005.1 Protein Homology CDS 50602 52263 . + 0 ID=cds-MCP9536746.1;Parent=gene-NND05_04110;Dbxref=NCBI_GP:MCP9536746.1;Name=MCP9536746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377971.1;locus_tag=NND05_04110;product=nucleoside kinase;protein_id=MCP9536746.1;transl_table=11 JANDXE010000005.1 Genbank gene 52807 53466 . - . ID=gene-NND05_04115;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=NND05_04115 JANDXE010000005.1 Protein Homology CDS 52807 53466 . - 0 ID=cds-MCP9536747.1;Parent=gene-NND05_04115;Dbxref=NCBI_GP:MCP9536747.1;Name=MCP9536747.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434409.1;locus_tag=NND05_04115;product=uracil phosphoribosyltransferase;protein_id=MCP9536747.1;transl_table=11 JANDXE010000005.1 Genbank gene 53919 55532 . + . ID=gene-NND05_04120;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=NND05_04120 JANDXE010000005.1 Protein Homology CDS 53919 55532 . + 0 ID=cds-MCP9536748.1;Parent=gene-NND05_04120;Dbxref=NCBI_GP:MCP9536748.1;Name=MCP9536748.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004347857.1;locus_tag=NND05_04120;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=MCP9536748.1;transl_table=11 JANDXE010000005.1 Genbank gene 55734 57119 . + . ID=gene-NND05_04125;Name=NND05_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04125 JANDXE010000005.1 Protein Homology CDS 55734 57119 . + 0 ID=cds-MCP9536749.1;Parent=gene-NND05_04125;Dbxref=NCBI_GP:MCP9536749.1;Name=MCP9536749.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039698.1;locus_tag=NND05_04125;product=DUF6242 domain-containing protein;protein_id=MCP9536749.1;transl_table=11 JANDXE010000005.1 Genbank gene 57227 57859 . + . ID=gene-NND05_04130;Name=NND05_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04130 JANDXE010000005.1 Protein Homology CDS 57227 57859 . + 0 ID=cds-MCP9536750.1;Parent=gene-NND05_04130;Dbxref=NCBI_GP:MCP9536750.1;Name=MCP9536750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004356249.1;locus_tag=NND05_04130;product=porin family protein;protein_id=MCP9536750.1;transl_table=11 JANDXE010000005.1 Genbank gene 57884 58636 . + . ID=gene-NND05_04135;Name=NND05_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04135 JANDXE010000005.1 Protein Homology CDS 57884 58636 . + 0 ID=cds-MCP9536751.1;Parent=gene-NND05_04135;Dbxref=NCBI_GP:MCP9536751.1;Name=MCP9536751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344714.1;locus_tag=NND05_04135;product=isoprenyl transferase;protein_id=MCP9536751.1;transl_table=11 JANDXE010000005.1 Genbank gene 58687 61323 . + . ID=gene-NND05_04140;Name=NND05_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04140 JANDXE010000005.1 Protein Homology CDS 58687 61323 . + 0 ID=cds-MCP9536752.1;Parent=gene-NND05_04140;Dbxref=NCBI_GP:MCP9536752.1;Name=MCP9536752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135158.1;locus_tag=NND05_04140;product=outer membrane protein assembly factor BamA;protein_id=MCP9536752.1;transl_table=11 JANDXE010000005.1 Genbank gene 61335 61850 . + . ID=gene-NND05_04145;Name=NND05_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04145 JANDXE010000005.1 Protein Homology CDS 61335 61850 . + 0 ID=cds-MCP9536753.1;Parent=gene-NND05_04145;Dbxref=NCBI_GP:MCP9536753.1;Name=MCP9536753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281196.1;locus_tag=NND05_04145;product=OmpH family outer membrane protein;protein_id=MCP9536753.1;transl_table=11 JANDXE010000005.1 Genbank gene 61991 62476 . + . ID=gene-NND05_04150;Name=NND05_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04150 JANDXE010000005.1 Protein Homology CDS 61991 62476 . + 0 ID=cds-MCP9536754.1;Parent=gene-NND05_04150;Dbxref=NCBI_GP:MCP9536754.1;Name=MCP9536754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343392.1;locus_tag=NND05_04150;product=OmpH family outer membrane protein;protein_id=MCP9536754.1;transl_table=11 JANDXE010000005.1 Genbank gene 62579 63130 . + . ID=gene-NND05_04155;Name=NND05_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04155 JANDXE010000005.1 Protein Homology CDS 62579 63130 . + 0 ID=cds-MCP9536755.1;Parent=gene-NND05_04155;Dbxref=NCBI_GP:MCP9536755.1;Name=MCP9536755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848099.1;locus_tag=NND05_04155;product=OmpH family outer membrane protein;protein_id=MCP9536755.1;transl_table=11 JANDXE010000005.1 Genbank gene 63127 63963 . + . ID=gene-NND05_04160;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=NND05_04160 JANDXE010000005.1 Protein Homology CDS 63127 63963 . + 0 ID=cds-MCP9536756.1;Parent=gene-NND05_04160;Dbxref=NCBI_GP:MCP9536756.1;Name=MCP9536756.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344718.1;locus_tag=NND05_04160;product=glutamate racemase;protein_id=MCP9536756.1;transl_table=11 JANDXE010000005.1 Genbank gene 63994 64329 . + . ID=gene-NND05_04165;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=NND05_04165 JANDXE010000005.1 Protein Homology CDS 63994 64329 . + 0 ID=cds-MCP9536757.1;Parent=gene-NND05_04165;Dbxref=NCBI_GP:MCP9536757.1;Name=MCP9536757.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368991.1;locus_tag=NND05_04165;product=30S ribosome-binding factor RbfA;protein_id=MCP9536757.1;transl_table=11 JANDXE010000005.1 Genbank gene 64346 65575 . + . ID=gene-NND05_04170;Name=NND05_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04170 JANDXE010000005.1 Protein Homology CDS 64346 65575 . + 0 ID=cds-MCP9536758.1;Parent=gene-NND05_04170;Dbxref=NCBI_GP:MCP9536758.1;Name=MCP9536758.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848096.1;locus_tag=NND05_04170;product=FtsX-like permease family protein;protein_id=MCP9536758.1;transl_table=11 JANDXE010000005.1 Genbank gene 65838 66476 . - . ID=gene-NND05_04175;Name=NND05_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04175 JANDXE010000005.1 Protein Homology CDS 65838 66476 . - 0 ID=cds-MCP9536759.1;Parent=gene-NND05_04175;Dbxref=NCBI_GP:MCP9536759.1;Name=MCP9536759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006043824.1;locus_tag=NND05_04175;product=O-methyltransferase;protein_id=MCP9536759.1;transl_table=11 JANDXE010000005.1 Genbank gene 66478 66912 . - . ID=gene-NND05_04180;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NND05_04180 JANDXE010000005.1 Protein Homology CDS 66478 66912 . - 0 ID=cds-MCP9536760.1;Parent=gene-NND05_04180;Dbxref=NCBI_GP:MCP9536760.1;Name=MCP9536760.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377910.1;locus_tag=NND05_04180;product=type II 3-dehydroquinate dehydratase;protein_id=MCP9536760.1;transl_table=11 JANDXE010000005.1 Genbank gene 67046 67951 . + . ID=gene-NND05_04185;Name=NND05_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04185 JANDXE010000005.1 Protein Homology CDS 67046 67951 . + 0 ID=cds-MCP9536761.1;Parent=gene-NND05_04185;Dbxref=NCBI_GP:MCP9536761.1;Name=MCP9536761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848093.1;locus_tag=NND05_04185;product=tyrosine recombinase;protein_id=MCP9536761.1;transl_table=11 JANDXE010000005.1 Genbank gene 68100 69374 . + . ID=gene-NND05_04190;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=NND05_04190 JANDXE010000005.1 Protein Homology CDS 68100 69374 . + 0 ID=cds-MCP9536762.1;Parent=gene-NND05_04190;Dbxref=NCBI_GP:MCP9536762.1;Name=MCP9536762.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372899.1;locus_tag=NND05_04190;product=methionine adenosyltransferase;protein_id=MCP9536762.1;transl_table=11 JANDXE010000005.1 Genbank gene 69425 70456 . + . ID=gene-NND05_04195;Name=NND05_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04195 JANDXE010000005.1 Protein Homology CDS 69425 70456 . + 0 ID=cds-MCP9536763.1;Parent=gene-NND05_04195;Dbxref=NCBI_GP:MCP9536763.1;Name=MCP9536763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920673.1;locus_tag=NND05_04195;product=DUF4271 domain-containing protein;protein_id=MCP9536763.1;transl_table=11 JANDXE010000005.1 Genbank gene 70463 71212 . + . ID=gene-NND05_04200;Name=NND05_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04200 JANDXE010000005.1 Protein Homology CDS 70463 71212 . + 0 ID=cds-MCP9536764.1;Parent=gene-NND05_04200;Dbxref=NCBI_GP:MCP9536764.1;Name=MCP9536764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343280.1;locus_tag=NND05_04200;product=uroporphyrinogen-III synthase;protein_id=MCP9536764.1;transl_table=11 JANDXE010000005.1 Genbank gene 71221 71625 . + . ID=gene-NND05_04205;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NND05_04205 JANDXE010000005.1 Protein Homology CDS 71221 71625 . + 0 ID=cds-MCP9536765.1;Parent=gene-NND05_04205;Dbxref=NCBI_GP:MCP9536765.1;Name=MCP9536765.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367907.1;locus_tag=NND05_04205;product=ribonuclease P protein component;protein_id=MCP9536765.1;transl_table=11 JANDXE010000005.1 Genbank gene 71622 71873 . + . ID=gene-NND05_04210;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NND05_04210 JANDXE010000005.1 Protein Homology CDS 71622 71873 . + 0 ID=cds-MCP9536766.1;Parent=gene-NND05_04210;Dbxref=NCBI_GP:MCP9536766.1;Name=MCP9536766.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368973.1;locus_tag=NND05_04210;product=membrane protein insertion efficiency factor YidD;protein_id=MCP9536766.1;transl_table=11 JANDXE010000005.1 Genbank gene 71937 73238 . + . ID=gene-NND05_04215;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NND05_04215 JANDXE010000005.1 Protein Homology CDS 71937 73238 . + 0 ID=cds-MCP9536767.1;Parent=gene-NND05_04215;Dbxref=NCBI_GP:MCP9536767.1;Name=MCP9536767.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377988.1;locus_tag=NND05_04215;product=tyrosine--tRNA ligase;protein_id=MCP9536767.1;transl_table=11 JANDXE010000005.1 Genbank gene 73305 73375 . + . ID=gene-NND05_04220;Name=NND05_04220;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04220 JANDXE010000005.1 tRNAscan-SE tRNA 73305 73375 . + . ID=rna-NND05_04220;Parent=gene-NND05_04220;anticodon=(pos:73337..73339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04220;product=tRNA-Gln JANDXE010000005.1 tRNAscan-SE exon 73305 73375 . + . ID=exon-NND05_04220-1;Parent=rna-NND05_04220;anticodon=(pos:73337..73339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04220;product=tRNA-Gln JANDXE010000005.1 Genbank gene 73478 73999 . + . ID=gene-NND05_04225;Name=NND05_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04225 JANDXE010000005.1 Protein Homology CDS 73478 73999 . + 0 ID=cds-MCP9536768.1;Parent=gene-NND05_04225;Dbxref=NCBI_GP:MCP9536768.1;Name=MCP9536768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063389.1;locus_tag=NND05_04225;product=RNA polymerase sigma-70 factor;protein_id=MCP9536768.1;transl_table=11 JANDXE010000005.1 Genbank gene 74024 76774 . + . ID=gene-NND05_04230;Name=NND05_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04230 JANDXE010000005.1 Protein Homology CDS 74024 76774 . + 0 ID=cds-MCP9536769.1;Parent=gene-NND05_04230;Dbxref=NCBI_GP:MCP9536769.1;Name=MCP9536769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007175269.1;locus_tag=NND05_04230;product=TonB-dependent receptor;protein_id=MCP9536769.1;transl_table=11 JANDXE010000005.1 Genbank gene 76797 78017 . + . ID=gene-NND05_04235;Name=NND05_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04235 JANDXE010000005.1 Protein Homology CDS 76797 78017 . + 0 ID=cds-MCP9536770.1;Parent=gene-NND05_04235;Dbxref=NCBI_GP:MCP9536770.1;Name=MCP9536770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025420.2;locus_tag=NND05_04235;product=DUF4249 domain-containing protein;protein_id=MCP9536770.1;transl_table=11 JANDXE010000005.1 Genbank gene 78032 78865 . + . ID=gene-NND05_04240;Name=NND05_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04240 JANDXE010000005.1 GeneMarkS-2+ CDS 78032 78865 . + 0 ID=cds-MCP9536771.1;Parent=gene-NND05_04240;Dbxref=NCBI_GP:MCP9536771.1;Name=MCP9536771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04240;product=hypothetical protein;protein_id=MCP9536771.1;transl_table=11 JANDXE010000005.1 Genbank gene 78883 79698 . + . ID=gene-NND05_04245;Name=NND05_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04245 JANDXE010000005.1 Protein Homology CDS 78883 79698 . + 0 ID=cds-MCP9536772.1;Parent=gene-NND05_04245;Dbxref=NCBI_GP:MCP9536772.1;Name=MCP9536772.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.2;locus_tag=NND05_04245;product=FecR domain-containing protein;protein_id=MCP9536772.1;transl_table=11 JANDXE010000005.1 Genbank gene 79895 80170 . - . ID=gene-NND05_04250;Name=NND05_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04250 JANDXE010000005.1 Protein Homology CDS 79895 80170 . - 0 ID=cds-MCP9536773.1;Parent=gene-NND05_04250;Dbxref=NCBI_GP:MCP9536773.1;Name=MCP9536773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384576.1;locus_tag=NND05_04250;product=HU family DNA-binding protein;protein_id=MCP9536773.1;transl_table=11 JANDXE010000005.1 Genbank gene 80398 81372 . + . ID=gene-NND05_04255;Name=NND05_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04255 JANDXE010000005.1 Protein Homology CDS 80398 81372 . + 0 ID=cds-MCP9536774.1;Parent=gene-NND05_04255;Dbxref=NCBI_GP:MCP9536774.1;Name=MCP9536774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848084.1;locus_tag=NND05_04255;product=rhomboid family intramembrane serine protease;protein_id=MCP9536774.1;transl_table=11 JANDXE010000005.1 Genbank gene 81377 82474 . + . ID=gene-NND05_04260;Name=NND05_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04260 JANDXE010000005.1 Protein Homology CDS 81377 82474 . + 0 ID=cds-MCP9536775.1;Parent=gene-NND05_04260;Dbxref=NCBI_GP:MCP9536775.1;Name=MCP9536775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848083.1;locus_tag=NND05_04260;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MCP9536775.1;transl_table=11 JANDXE010000005.1 Genbank gene 82585 85608 . + . ID=gene-NND05_04265;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=NND05_04265 JANDXE010000005.1 Protein Homology CDS 82585 85608 . + 0 ID=cds-MCP9536776.1;Parent=gene-NND05_04265;Dbxref=NCBI_GP:MCP9536776.1;Name=MCP9536776.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848082.1;locus_tag=NND05_04265;product=protein translocase subunit SecDF;protein_id=MCP9536776.1;transl_table=11 JANDXE010000005.1 Genbank gene 85738 85809 . - . ID=gene-NND05_04270;Name=NND05_04270;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04270 JANDXE010000005.1 tRNAscan-SE tRNA 85738 85809 . - . ID=rna-NND05_04270;Parent=gene-NND05_04270;anticodon=(pos:complement(85774..85776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04270;product=tRNA-Arg JANDXE010000005.1 tRNAscan-SE exon 85738 85809 . - . ID=exon-NND05_04270-1;Parent=rna-NND05_04270;anticodon=(pos:complement(85774..85776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04270;product=tRNA-Arg JANDXE010000005.1 Genbank gene 85860 86822 . + . ID=gene-NND05_04275;Name=NND05_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04275 JANDXE010000005.1 Protein Homology CDS 85860 86822 . + 0 ID=cds-MCP9536777.1;Parent=gene-NND05_04275;Dbxref=NCBI_GP:MCP9536777.1;Name=MCP9536777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848081.1;locus_tag=NND05_04275;product=endonuclease;protein_id=MCP9536777.1;transl_table=11 JANDXE010000005.1 Genbank gene 86952 87809 . + . ID=gene-NND05_04280;Name=NND05_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04280 JANDXE010000005.1 Protein Homology CDS 86952 87809 . + 0 ID=cds-MCP9536778.1;Parent=gene-NND05_04280;Dbxref=NCBI_GP:MCP9536778.1;Name=MCP9536778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228892.1;locus_tag=NND05_04280;product=SDR family oxidoreductase;protein_id=MCP9536778.1;transl_table=11 JANDXE010000005.1 Genbank gene 88129 89022 . + . ID=gene-NND05_04285;Name=NND05_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04285 JANDXE010000005.1 Protein Homology CDS 88129 89022 . + 0 ID=cds-MCP9536779.1;Parent=gene-NND05_04285;Dbxref=NCBI_GP:MCP9536779.1;Name=MCP9536779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011108670.1;locus_tag=NND05_04285;product=hypothetical protein;protein_id=MCP9536779.1;transl_table=11 JANDXE010000005.1 Genbank gene 89025 89291 . + . ID=gene-NND05_04290;Name=NND05_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04290 JANDXE010000005.1 Protein Homology CDS 89025 89291 . + 0 ID=cds-MCP9536780.1;Parent=gene-NND05_04290;Dbxref=NCBI_GP:MCP9536780.1;Name=MCP9536780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_04290;product=helix-turn-helix domain-containing protein;protein_id=MCP9536780.1;transl_table=11 JANDXE010000005.1 Genbank gene 89523 90746 . + . ID=gene-NND05_04295;Name=NND05_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04295 JANDXE010000005.1 Protein Homology CDS 89523 90746 . + 0 ID=cds-MCP9536781.1;Parent=gene-NND05_04295;Dbxref=NCBI_GP:MCP9536781.1;Name=MCP9536781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=NND05_04295;product=OmpA family protein;protein_id=MCP9536781.1;transl_table=11 JANDXE010000005.1 Genbank gene 90767 91681 . + . ID=gene-NND05_04300;Name=NND05_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04300 JANDXE010000005.1 Protein Homology CDS 90767 91681 . + 0 ID=cds-MCP9536782.1;Parent=gene-NND05_04300;Dbxref=NCBI_GP:MCP9536782.1;Name=MCP9536782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846242.1;locus_tag=NND05_04300;product=FimB/Mfa2 family fimbrial subunit;protein_id=MCP9536782.1;transl_table=11 JANDXE010000005.1 Genbank gene 91743 92657 . + . ID=gene-NND05_04305;Name=NND05_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04305 JANDXE010000005.1 Protein Homology CDS 91743 92657 . + 0 ID=cds-MCP9536783.1;Parent=gene-NND05_04305;Dbxref=NCBI_GP:MCP9536783.1;Name=MCP9536783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_04305;product=fimbrillin family protein;protein_id=MCP9536783.1;transl_table=11 JANDXE010000005.1 Genbank gene 92691 93680 . + . ID=gene-NND05_04310;Name=NND05_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04310 JANDXE010000005.1 Protein Homology CDS 92691 93680 . + 0 ID=cds-MCP9536784.1;Parent=gene-NND05_04310;Dbxref=NCBI_GP:MCP9536784.1;Name=MCP9536784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024548.2;locus_tag=NND05_04310;product=fimbrillin family protein;protein_id=MCP9536784.1;transl_table=11 JANDXE010000005.1 Genbank gene 93712 95190 . + . ID=gene-NND05_04315;Name=NND05_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04315 JANDXE010000005.1 Protein Homology CDS 93712 95190 . + 0 ID=cds-MCP9536785.1;Parent=gene-NND05_04315;Dbxref=NCBI_GP:MCP9536785.1;Name=MCP9536785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024702.2;locus_tag=NND05_04315;product=leucine-rich repeat protein;protein_id=MCP9536785.1;transl_table=11 JANDXE010000005.1 Genbank gene 95353 96243 . - . ID=gene-NND05_04320;Name=NND05_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04320 JANDXE010000005.1 Protein Homology CDS 95353 96243 . - 0 ID=cds-MCP9536786.1;Parent=gene-NND05_04320;Dbxref=NCBI_GP:MCP9536786.1;Name=MCP9536786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277119.1;locus_tag=NND05_04320;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=MCP9536786.1;transl_table=11 JANDXE010000005.1 Genbank gene 96659 96775 . + . ID=gene-NND05_04325;Name=NND05_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04325 JANDXE010000005.1 Protein Homology CDS 96659 96775 . + 0 ID=cds-MCP9536787.1;Parent=gene-NND05_04325;Dbxref=NCBI_GP:MCP9536787.1;Name=MCP9536787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023288.2;locus_tag=NND05_04325;product=N-acetylmuramidase domain-containing protein;protein_id=MCP9536787.1;transl_table=11 JANDXE010000005.1 Genbank gene 96812 97885 . - . ID=gene-NND05_04330;Name=NND05_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04330 JANDXE010000005.1 Protein Homology CDS 96812 97885 . - 0 ID=cds-MCP9536788.1;Parent=gene-NND05_04330;Dbxref=NCBI_GP:MCP9536788.1;Name=MCP9536788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004329798.1;locus_tag=NND05_04330;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9536788.1;transl_table=11 JANDXE010000005.1 Genbank gene 98063 98224 . + . ID=gene-NND05_04335;Name=NND05_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04335 JANDXE010000005.1 GeneMarkS-2+ CDS 98063 98224 . + 0 ID=cds-MCP9536789.1;Parent=gene-NND05_04335;Dbxref=NCBI_GP:MCP9536789.1;Name=MCP9536789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04335;product=hypothetical protein;protein_id=MCP9536789.1;transl_table=11 JANDXE010000005.1 Genbank gene 98369 99100 . + . ID=gene-NND05_04340;Name=NND05_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04340 JANDXE010000005.1 Protein Homology CDS 98369 99100 . + 0 ID=cds-MCP9536790.1;Parent=gene-NND05_04340;Dbxref=NCBI_GP:MCP9536790.1;Name=MCP9536790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024895.2;locus_tag=NND05_04340;product=PorT family protein;protein_id=MCP9536790.1;transl_table=11 JANDXE010000005.1 Genbank gene 99187 101253 . - . ID=gene-NND05_04345;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NND05_04345 JANDXE010000005.1 Protein Homology CDS 99187 101253 . - 0 ID=cds-MCP9536791.1;Parent=gene-NND05_04345;Dbxref=NCBI_GP:MCP9536791.1;Name=MCP9536791.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004361002.1;locus_tag=NND05_04345;product=methionine--tRNA ligase;protein_id=MCP9536791.1;transl_table=11 JANDXE010000005.1 Genbank gene 101572 103122 . - . ID=gene-NND05_04350;Name=NND05_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04350 JANDXE010000005.1 Protein Homology CDS 101572 103122 . - 0 ID=cds-MCP9536792.1;Parent=gene-NND05_04350;Dbxref=NCBI_GP:MCP9536792.1;Name=MCP9536792.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848071.1;locus_tag=NND05_04350;product=YifB family Mg chelatase-like AAA ATPase;protein_id=MCP9536792.1;transl_table=11 JANDXE010000005.1 Genbank gene 103156 104163 . - . ID=gene-NND05_04355;Name=NND05_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04355 JANDXE010000005.1 Protein Homology CDS 103156 104163 . - 0 ID=cds-MCP9536793.1;Parent=gene-NND05_04355;Dbxref=NCBI_GP:MCP9536793.1;Name=MCP9536793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410585.1;locus_tag=NND05_04355;product=DUF4369 domain-containing protein;protein_id=MCP9536793.1;transl_table=11 JANDXE010000005.1 Genbank gene 104186 104271 . - . ID=gene-NND05_04360;Name=NND05_04360;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04360 JANDXE010000005.1 tRNAscan-SE tRNA 104186 104271 . - . ID=rna-NND05_04360;Parent=gene-NND05_04360;anticodon=(pos:complement(104235..104237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04360;product=tRNA-Leu JANDXE010000005.1 tRNAscan-SE exon 104186 104271 . - . ID=exon-NND05_04360-1;Parent=rna-NND05_04360;anticodon=(pos:complement(104235..104237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04360;product=tRNA-Leu JANDXE010000005.1 Genbank gene 104292 104364 . - . ID=gene-NND05_04365;Name=NND05_04365;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04365 JANDXE010000005.1 tRNAscan-SE tRNA 104292 104364 . - . ID=rna-NND05_04365;Parent=gene-NND05_04365;anticodon=(pos:complement(104329..104331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04365;product=tRNA-Gly JANDXE010000005.1 tRNAscan-SE exon 104292 104364 . - . ID=exon-NND05_04365-1;Parent=rna-NND05_04365;anticodon=(pos:complement(104329..104331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04365;product=tRNA-Gly JANDXE010000005.1 Genbank gene 104484 105098 . - . ID=gene-NND05_04370;Name=NND05_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04370 JANDXE010000005.1 GeneMarkS-2+ CDS 104484 105098 . - 0 ID=cds-MCP9536794.1;Parent=gene-NND05_04370;Dbxref=NCBI_GP:MCP9536794.1;Name=MCP9536794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04370;product=hypothetical protein;protein_id=MCP9536794.1;transl_table=11 JANDXE010000005.1 Genbank gene 105206 106543 . - . ID=gene-NND05_04375;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=NND05_04375 JANDXE010000005.1 Protein Homology CDS 105206 106543 . - 0 ID=cds-MCP9536795.1;Parent=gene-NND05_04375;Dbxref=NCBI_GP:MCP9536795.1;Name=MCP9536795.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564385.1;locus_tag=NND05_04375;product=argininosuccinate lyase;protein_id=MCP9536795.1;transl_table=11 JANDXE010000005.1 Genbank gene 106557 107018 . - . ID=gene-NND05_04380;Name=NND05_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04380 JANDXE010000005.1 Protein Homology CDS 106557 107018 . - 0 ID=cds-MCP9536796.1;Parent=gene-NND05_04380;Dbxref=NCBI_GP:MCP9536796.1;Name=MCP9536796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848067.1;locus_tag=NND05_04380;product=SRPBCC family protein;protein_id=MCP9536796.1;transl_table=11 JANDXE010000005.1 Genbank gene 107036 107668 . - . ID=gene-NND05_04385;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=NND05_04385 JANDXE010000005.1 Protein Homology CDS 107036 107668 . - 0 ID=cds-MCP9536797.1;Parent=gene-NND05_04385;Dbxref=NCBI_GP:MCP9536797.1;Name=MCP9536797.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375411.1;locus_tag=NND05_04385;product=orotate phosphoribosyltransferase;protein_id=MCP9536797.1;transl_table=11 JANDXE010000005.1 Genbank gene 107763 108491 . - . ID=gene-NND05_04390;Name=NND05_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04390 JANDXE010000005.1 Protein Homology CDS 107763 108491 . - 0 ID=cds-MCP9536798.1;Parent=gene-NND05_04390;Dbxref=NCBI_GP:MCP9536798.1;Name=MCP9536798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009433873.1;locus_tag=NND05_04390;product=double zinc ribbon domain-containing protein;protein_id=MCP9536798.1;transl_table=11 JANDXE010000005.1 Genbank gene 108568 109095 . - . ID=gene-NND05_04395;Name=NND05_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04395 JANDXE010000005.1 Protein Homology CDS 108568 109095 . - 0 ID=cds-MCP9536799.1;Parent=gene-NND05_04395;Dbxref=NCBI_GP:MCP9536799.1;Name=MCP9536799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848063.1;locus_tag=NND05_04395;product=RecX family transcriptional regulator;protein_id=MCP9536799.1;transl_table=11 JANDXE010000005.1 Genbank gene 109123 110031 . - . ID=gene-NND05_04400;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NND05_04400 JANDXE010000005.1 Protein Homology CDS 109123 110031 . - 0 ID=cds-MCP9536800.1;Parent=gene-NND05_04400;Dbxref=NCBI_GP:MCP9536800.1;Name=MCP9536800.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410604.1;locus_tag=NND05_04400;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=MCP9536800.1;transl_table=11 JANDXE010000005.1 Genbank gene 110119 111156 . + . ID=gene-NND05_04405;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NND05_04405 JANDXE010000005.1 Protein Homology CDS 110119 111156 . + 0 ID=cds-MCP9536801.1;Parent=gene-NND05_04405;Dbxref=NCBI_GP:MCP9536801.1;Name=MCP9536801.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848061.1;locus_tag=NND05_04405;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=MCP9536801.1;transl_table=11 JANDXE010000005.1 Genbank gene 111153 111311 . + . ID=gene-NND05_04410;Name=NND05_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04410 JANDXE010000005.1 Protein Homology CDS 111153 111311 . + 0 ID=cds-MCP9536802.1;Parent=gene-NND05_04410;Dbxref=NCBI_GP:MCP9536802.1;Name=MCP9536802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009229843.1;locus_tag=NND05_04410;product=hypothetical protein;protein_id=MCP9536802.1;transl_table=11 JANDXE010000005.1 Genbank gene 111406 114699 . - . ID=gene-NND05_04415;Name=NND05_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04415 JANDXE010000005.1 Protein Homology CDS 111406 114699 . - 0 ID=cds-MCP9536803.1;Parent=gene-NND05_04415;Dbxref=NCBI_GP:MCP9536803.1;Name=MCP9536803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014850.2;locus_tag=NND05_04415;product=DUF4981 domain-containing protein;protein_id=MCP9536803.1;transl_table=11 JANDXE010000005.1 Genbank gene 115198 115671 . - . ID=gene-NND05_04420;Name=NND05_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04420 JANDXE010000005.1 Protein Homology CDS 115198 115671 . - 0 ID=cds-MCP9536804.1;Parent=gene-NND05_04420;Dbxref=NCBI_GP:MCP9536804.1;Name=MCP9536804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848024.1;locus_tag=NND05_04420;product=ribonuclease H;protein_id=MCP9536804.1;transl_table=11 JANDXE010000005.1 Genbank gene 115906 117726 . - . ID=gene-NND05_04425;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NND05_04425 JANDXE010000005.1 Protein Homology CDS 115906 117726 . - 0 ID=cds-MCP9536805.1;Parent=gene-NND05_04425;Dbxref=NCBI_GP:MCP9536805.1;Name=MCP9536805.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410572.1;locus_tag=NND05_04425;product=arginine--tRNA ligase;protein_id=MCP9536805.1;transl_table=11 JANDXE010000005.1 Genbank gene 117875 118063 . - . ID=gene-NND05_04430;Name=NND05_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04430 JANDXE010000005.1 Protein Homology CDS 117875 118063 . - 0 ID=cds-MCP9536806.1;Parent=gene-NND05_04430;Dbxref=NCBI_GP:MCP9536806.1;Name=MCP9536806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848022.1;locus_tag=NND05_04430;product=hypothetical protein;protein_id=MCP9536806.1;transl_table=11 JANDXE010000005.1 Genbank gene 118218 119093 . - . ID=gene-NND05_04435;Name=NND05_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04435 JANDXE010000005.1 Protein Homology CDS 118218 119093 . - 0 ID=cds-MCP9536807.1;Parent=gene-NND05_04435;Dbxref=NCBI_GP:MCP9536807.1;Name=MCP9536807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008771670.1;locus_tag=NND05_04435;product=HAMP domain-containing histidine kinase;protein_id=MCP9536807.1;transl_table=11 JANDXE010000005.1 Genbank gene 119107 119625 . - . ID=gene-NND05_04440;Name=NND05_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04440 JANDXE010000005.1 Protein Homology CDS 119107 119625 . - 0 ID=cds-MCP9536808.1;Parent=gene-NND05_04440;Dbxref=NCBI_GP:MCP9536808.1;Name=MCP9536808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064719.1;locus_tag=NND05_04440;product=DNA-binding response regulator;protein_id=MCP9536808.1;transl_table=11 JANDXE010000005.1 Genbank gene 119866 122208 . + . ID=gene-NND05_04445;Name=NND05_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04445 JANDXE010000005.1 Protein Homology CDS 119866 122208 . + 0 ID=cds-MCP9536809.1;Parent=gene-NND05_04445;Dbxref=NCBI_GP:MCP9536809.1;Name=MCP9536809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024116.2;locus_tag=NND05_04445;product=ABC transporter permease;protein_id=MCP9536809.1;transl_table=11 JANDXE010000005.1 Genbank gene 122240 122920 . + . ID=gene-NND05_04450;Name=NND05_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04450 JANDXE010000005.1 Protein Homology CDS 122240 122920 . + 0 ID=cds-MCP9536810.1;Parent=gene-NND05_04450;Dbxref=NCBI_GP:MCP9536810.1;Name=MCP9536810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155644.1;locus_tag=NND05_04450;product=ABC transporter ATP-binding protein;protein_id=MCP9536810.1;transl_table=11 JANDXE010000005.1 Genbank gene 123096 124439 . + . ID=gene-NND05_04455;Name=NND05_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04455 JANDXE010000005.1 Protein Homology CDS 123096 124439 . + 0 ID=cds-MCP9536811.1;Parent=gene-NND05_04455;Dbxref=NCBI_GP:MCP9536811.1;Name=MCP9536811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848059.1;locus_tag=NND05_04455;product=TolC family protein;protein_id=MCP9536811.1;transl_table=11 JANDXE010000005.1 Genbank gene 124443 125696 . + . ID=gene-NND05_04460;Name=NND05_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04460 JANDXE010000005.1 Protein Homology CDS 124443 125696 . + 0 ID=cds-MCP9536812.1;Parent=gene-NND05_04460;Dbxref=NCBI_GP:MCP9536812.1;Name=MCP9536812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848058.1;locus_tag=NND05_04460;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9536812.1;transl_table=11 JANDXE010000005.1 Genbank gene 125747 128143 . + . ID=gene-NND05_04465;Name=NND05_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04465 JANDXE010000005.1 Protein Homology CDS 125747 128143 . + 0 ID=cds-MCP9536813.1;Parent=gene-NND05_04465;Dbxref=NCBI_GP:MCP9536813.1;Name=MCP9536813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024116.2;locus_tag=NND05_04465;product=ABC transporter permease;protein_id=MCP9536813.1;transl_table=11 JANDXE010000005.1 Genbank gene 128176 128856 . + . ID=gene-NND05_04470;Name=NND05_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04470 JANDXE010000005.1 Protein Homology CDS 128176 128856 . + 0 ID=cds-MCP9536814.1;Parent=gene-NND05_04470;Dbxref=NCBI_GP:MCP9536814.1;Name=MCP9536814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848054.1;locus_tag=NND05_04470;product=ABC transporter ATP-binding protein;protein_id=MCP9536814.1;transl_table=11 JANDXE010000005.1 Genbank gene 128895 129686 . - . ID=gene-NND05_04475;Name=NND05_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04475 JANDXE010000005.1 Protein Homology CDS 128895 129686 . - 0 ID=cds-MCP9536815.1;Parent=gene-NND05_04475;Dbxref=NCBI_GP:MCP9536815.1;Name=MCP9536815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901259.1;locus_tag=NND05_04475;product=Fic family protein;protein_id=MCP9536815.1;transl_table=11 JANDXE010000005.1 Genbank gene 129703 130092 . - . ID=gene-NND05_04480;Name=NND05_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04480 JANDXE010000005.1 Protein Homology CDS 129703 130092 . - 0 ID=cds-MCP9536816.1;Parent=gene-NND05_04480;Dbxref=NCBI_GP:MCP9536816.1;Name=MCP9536816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848053.1;locus_tag=NND05_04480;product=HEPN domain-containing protein;protein_id=MCP9536816.1;transl_table=11 JANDXE010000005.1 Genbank gene 130098 130418 . - . ID=gene-NND05_04485;Name=NND05_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04485 JANDXE010000005.1 Protein Homology CDS 130098 130418 . - 0 ID=cds-MCP9536817.1;Parent=gene-NND05_04485;Dbxref=NCBI_GP:MCP9536817.1;Name=MCP9536817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848052.1;locus_tag=NND05_04485;product=nucleotidyltransferase domain-containing protein;protein_id=MCP9536817.1;transl_table=11 JANDXE010000005.1 Genbank gene 130497 131729 . - . ID=gene-NND05_04490;Name=NND05_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04490 JANDXE010000005.1 Protein Homology CDS 130497 131729 . - 0 ID=cds-MCP9536818.1;Parent=gene-NND05_04490;Dbxref=NCBI_GP:MCP9536818.1;Name=MCP9536818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848051.1;locus_tag=NND05_04490;product=ATP-binding protein;protein_id=MCP9536818.1;transl_table=11 JANDXE010000005.1 Genbank gene 131719 133083 . - . ID=gene-NND05_04495;Name=NND05_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04495 JANDXE010000005.1 Protein Homology CDS 131719 133083 . - 0 ID=cds-MCP9536819.1;Parent=gene-NND05_04495;Dbxref=NCBI_GP:MCP9536819.1;Name=MCP9536819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848050.1;locus_tag=NND05_04495;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9536819.1;transl_table=11 JANDXE010000005.1 Genbank gene 133261 135402 . - . ID=gene-NND05_04500;Name=NND05_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04500 JANDXE010000005.1 Protein Homology CDS 133261 135402 . - 0 ID=cds-MCP9536820.1;Parent=gene-NND05_04500;Dbxref=NCBI_GP:MCP9536820.1;Name=MCP9536820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848049.1;locus_tag=NND05_04500;product=TonB-dependent receptor;protein_id=MCP9536820.1;transl_table=11 JANDXE010000005.1 Genbank gene 135497 135871 . - . ID=gene-NND05_04505;Name=NND05_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04505 JANDXE010000005.1 GeneMarkS-2+ CDS 135497 135871 . - 0 ID=cds-MCP9536821.1;Parent=gene-NND05_04505;Dbxref=NCBI_GP:MCP9536821.1;Name=MCP9536821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04505;product=hypothetical protein;protein_id=MCP9536821.1;transl_table=11 JANDXE010000005.1 Genbank gene 136176 138620 . + . ID=gene-NND05_04510;Name=NND05_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04510 JANDXE010000005.1 Protein Homology CDS 136176 138620 . + 0 ID=cds-MCP9536822.1;Parent=gene-NND05_04510;Dbxref=NCBI_GP:MCP9536822.1;Name=MCP9536822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026255.2;locus_tag=NND05_04510;product=outer membrane beta-barrel protein;protein_id=MCP9536822.1;transl_table=11 JANDXE010000005.1 Genbank gene 138559 139101 . + . ID=gene-NND05_04515;Name=NND05_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04515 JANDXE010000005.1 Protein Homology CDS 138559 139101 . + 0 ID=cds-MCP9536823.1;Parent=gene-NND05_04515;Dbxref=NCBI_GP:MCP9536823.1;Name=MCP9536823.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008761748.1;locus_tag=NND05_04515;product=RNA polymerase sigma-70 factor;protein_id=MCP9536823.1;transl_table=11 JANDXE010000005.1 Genbank gene 139113 140201 . + . ID=gene-NND05_04520;Name=NND05_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04520 JANDXE010000005.1 Protein Homology CDS 139113 140201 . + 0 ID=cds-MCP9536824.1;Parent=gene-NND05_04520;Dbxref=NCBI_GP:MCP9536824.1;Name=MCP9536824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.2;locus_tag=NND05_04520;product=FecR domain-containing protein;protein_id=MCP9536824.1;transl_table=11 JANDXE010000005.1 Genbank gene 141276 142148 . + . ID=gene-NND05_04525;Name=NND05_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04525 JANDXE010000005.1 Protein Homology CDS 141276 142148 . + 0 ID=cds-MCP9536825.1;Parent=gene-NND05_04525;Dbxref=NCBI_GP:MCP9536825.1;Name=MCP9536825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967290.1;locus_tag=NND05_04525;product=tetratricopeptide repeat protein;protein_id=MCP9536825.1;transl_table=11 JANDXE010000005.1 Genbank gene 142231 144801 . - . ID=gene-NND05_04530;Name=NND05_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04530 JANDXE010000005.1 GeneMarkS-2+ CDS 142231 144801 . - 0 ID=cds-MCP9536826.1;Parent=gene-NND05_04530;Dbxref=NCBI_GP:MCP9536826.1;Name=MCP9536826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04530;product=TonB-dependent receptor;protein_id=MCP9536826.1;transl_table=11 JANDXE010000005.1 Genbank gene 144823 145473 . - . ID=gene-NND05_04535;Name=NND05_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04535 JANDXE010000005.1 GeneMarkS-2+ CDS 144823 145473 . - 0 ID=cds-MCP9536827.1;Parent=gene-NND05_04535;Dbxref=NCBI_GP:MCP9536827.1;Name=MCP9536827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04535;product=DUF4974 domain-containing protein;protein_id=MCP9536827.1;transl_table=11 JANDXE010000005.1 Genbank gene 145484 146035 . - . ID=gene-NND05_04540;Name=NND05_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04540 JANDXE010000005.1 Protein Homology CDS 145484 146035 . - 0 ID=cds-MCP9536828.1;Parent=gene-NND05_04540;Dbxref=NCBI_GP:MCP9536828.1;Name=MCP9536828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369812.1;locus_tag=NND05_04540;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCP9536828.1;transl_table=11 JANDXE010000005.1 Genbank gene 146213 147541 . - . ID=gene-NND05_04545;Name=NND05_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04545 JANDXE010000005.1 Protein Homology CDS 146213 147541 . - 0 ID=cds-MCP9536829.1;Parent=gene-NND05_04545;Dbxref=NCBI_GP:MCP9536829.1;Name=MCP9536829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464191.1;locus_tag=NND05_04545;product=MATE family efflux transporter;protein_id=MCP9536829.1;transl_table=11 JANDXE010000005.1 Genbank gene 147641 148042 . - . ID=gene-NND05_04550;Name=NND05_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04550 JANDXE010000005.1 Protein Homology CDS 147641 148042 . - 0 ID=cds-MCP9536830.1;Parent=gene-NND05_04550;Dbxref=NCBI_GP:MCP9536830.1;Name=MCP9536830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848042.1;locus_tag=NND05_04550;product=hypothetical protein;protein_id=MCP9536830.1;transl_table=11 JANDXE010000005.1 Genbank gene 148074 150095 . - . ID=gene-NND05_04555;Name=NND05_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04555 JANDXE010000005.1 Protein Homology CDS 148074 150095 . - 0 ID=cds-MCP9536831.1;Parent=gene-NND05_04555;Dbxref=NCBI_GP:MCP9536831.1;Name=MCP9536831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848041.1;locus_tag=NND05_04555;product=AAA domain-containing protein;protein_id=MCP9536831.1;transl_table=11 JANDXE010000005.1 Genbank gene 150161 151030 . - . ID=gene-NND05_04560;Name=NND05_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04560 JANDXE010000005.1 Protein Homology CDS 150161 151030 . - 0 ID=cds-MCP9536832.1;Parent=gene-NND05_04560;Dbxref=NCBI_GP:MCP9536832.1;Name=MCP9536832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464194.1;locus_tag=NND05_04560;product=PfkB family carbohydrate kinase;protein_id=MCP9536832.1;transl_table=11 JANDXE010000005.1 Genbank gene 151230 152888 . + . ID=gene-NND05_04565;Name=NND05_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04565 JANDXE010000005.1 Protein Homology CDS 151230 152888 . + 0 ID=cds-MCP9536833.1;Parent=gene-NND05_04565;Dbxref=NCBI_GP:MCP9536833.1;Name=MCP9536833.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848039.1;locus_tag=NND05_04565;product=putative transporter;protein_id=MCP9536833.1;transl_table=11 JANDXE010000005.1 Genbank gene 152944 154707 . - . ID=gene-NND05_04570;Name=NND05_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04570 JANDXE010000005.1 Protein Homology CDS 152944 154707 . - 0 ID=cds-MCP9536834.1;Parent=gene-NND05_04570;Dbxref=NCBI_GP:MCP9536834.1;Name=MCP9536834.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848038.1;locus_tag=NND05_04570;product=pseudouridine synthase;protein_id=MCP9536834.1;transl_table=11 JANDXE010000005.1 Genbank gene 154842 155741 . + . ID=gene-NND05_04575;Name=NND05_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04575 JANDXE010000005.1 Protein Homology CDS 154842 155741 . + 0 ID=cds-MCP9536835.1;Parent=gene-NND05_04575;Dbxref=NCBI_GP:MCP9536835.1;Name=MCP9536835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848477.1;locus_tag=NND05_04575;product=DMT family transporter;protein_id=MCP9536835.1;transl_table=11 JANDXE010000005.1 Genbank pseudogene 156150 156321 . - . ID=gene-NND05_04580;Name=NND05_04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_04580;pseudo=true JANDXE010000005.1 Protein Homology CDS 156150 156321 . - 1 ID=cds-NND05_04580;Parent=gene-NND05_04580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965207.1;locus_tag=NND05_04580;product=transposase;pseudo=true;transl_table=11 ##sequence-region JANDXE010000063.1 1 2683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000063.1 Genbank region 1 2683 . + . ID=JANDXE010000063.1:1..2683;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000063.1 Genbank gene 1 2683 . + . ID=gene-NND05_15080;Name=NND05_15080;end_range=2683,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15080;partial=true;start_range=.,1 JANDXE010000063.1 cmsearch rRNA 1 2683 . + . ID=rna-NND05_15080;Parent=gene-NND05_15080;Dbxref=RFAM:RF02541;end_range=2683,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15080;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000063.1 cmsearch exon 1 2683 . + . ID=exon-NND05_15080-1;Parent=rna-NND05_15080;Dbxref=RFAM:RF02541;end_range=2683,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15080;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region JANDXE010000064.1 1 2606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000064.1 Genbank region 1 2606 . + . ID=JANDXE010000064.1:1..2606;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000064.1 Genbank gene 32 319 . + . ID=gene-NND05_15085;Name=NND05_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15085 JANDXE010000064.1 Protein Homology CDS 32 319 . + 0 ID=cds-MCP9538834.1;Parent=gene-NND05_15085;Dbxref=NCBI_GP:MCP9538834.1;Name=MCP9538834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008645702.1;locus_tag=NND05_15085;product=helix-turn-helix domain-containing protein;protein_id=MCP9538834.1;transl_table=11 JANDXE010000064.1 Genbank gene 413 748 . + . ID=gene-NND05_15090;Name=NND05_15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15090 JANDXE010000064.1 Protein Homology CDS 413 748 . + 0 ID=cds-MCP9538835.1;Parent=gene-NND05_15090;Dbxref=NCBI_GP:MCP9538835.1;Name=MCP9538835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004320655.1;locus_tag=NND05_15090;product=helix-turn-helix domain-containing protein;protein_id=MCP9538835.1;transl_table=11 JANDXE010000064.1 Genbank gene 851 1246 . - . ID=gene-NND05_15095;Name=NND05_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15095 JANDXE010000064.1 Protein Homology CDS 851 1246 . - 0 ID=cds-MCP9538836.1;Parent=gene-NND05_15095;Dbxref=NCBI_GP:MCP9538836.1;Name=MCP9538836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823778.1;locus_tag=NND05_15095;product=hypothetical protein;protein_id=MCP9538836.1;transl_table=11 JANDXE010000064.1 Genbank gene 1243 2514 . - . ID=gene-NND05_15100;Name=NND05_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15100 JANDXE010000064.1 Protein Homology CDS 1243 2514 . - 0 ID=cds-MCP9538837.1;Parent=gene-NND05_15100;Dbxref=NCBI_GP:MCP9538837.1;Name=MCP9538837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004312236.1;locus_tag=NND05_15100;product=site-specific integrase;protein_id=MCP9538837.1;transl_table=11 ##sequence-region JANDXE010000065.1 1 2412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000065.1 Genbank region 1 2412 . + . ID=JANDXE010000065.1:1..2412;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000065.1 Genbank gene 726 2066 . + . ID=gene-NND05_15105;Name=NND05_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15105 JANDXE010000065.1 Protein Homology CDS 726 2066 . + 0 ID=cds-MCP9538838.1;Parent=gene-NND05_15105;Dbxref=NCBI_GP:MCP9538838.1;Name=MCP9538838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013617324.1;locus_tag=NND05_15105;product=hypothetical protein;protein_id=MCP9538838.1;transl_table=11 ##sequence-region JANDXE010000066.1 1 2141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000066.1 Genbank region 1 2141 . + . ID=JANDXE010000066.1:1..2141;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000066.1 Genbank gene 514 2141 . + . ID=gene-NND05_15110;Name=NND05_15110;end_range=2141,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15110;partial=true JANDXE010000066.1 Protein Homology CDS 514 2141 . + 0 ID=cds-MCP9538839.1;Parent=gene-NND05_15110;Dbxref=NCBI_GP:MCP9538839.1;Name=MCP9538839.1;end_range=2141,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_15110;partial=true;product=HAMP domain-containing histidine kinase;protein_id=MCP9538839.1;transl_table=11 ##sequence-region JANDXE010000067.1 1 2108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000067.1 Genbank region 1 2108 . + . ID=JANDXE010000067.1:1..2108;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000067.1 Genbank gene 1 989 . - . ID=gene-NND05_15115;Name=NND05_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15115;partial=true;start_range=.,1 JANDXE010000067.1 Protein Homology CDS 1 989 . - 0 ID=cds-MCP9538840.1;Parent=gene-NND05_15115;Dbxref=NCBI_GP:MCP9538840.1;Name=MCP9538840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628591.1;locus_tag=NND05_15115;partial=true;product=site-specific integrase;protein_id=MCP9538840.1;start_range=.,1;transl_table=11 JANDXE010000067.1 Genbank gene 1053 2108 . - . ID=gene-NND05_15120;Name=NND05_15120;end_range=2108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15120;partial=true JANDXE010000067.1 Protein Homology CDS 1053 2108 . - 0 ID=cds-MCP9538841.1;Parent=gene-NND05_15120;Dbxref=NCBI_GP:MCP9538841.1;Name=MCP9538841.1;end_range=2108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942360.1;locus_tag=NND05_15120;partial=true;product=site-specific integrase;protein_id=MCP9538841.1;transl_table=11 ##sequence-region JANDXE010000068.1 1 2064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000068.1 Genbank region 1 2064 . + . ID=JANDXE010000068.1:1..2064;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000068.1 Genbank gene 261 572 . - . ID=gene-NND05_15125;Name=NND05_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15125 JANDXE010000068.1 GeneMarkS-2+ CDS 261 572 . - 0 ID=cds-MCP9538842.1;Parent=gene-NND05_15125;Dbxref=NCBI_GP:MCP9538842.1;Name=MCP9538842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15125;product=hypothetical protein;protein_id=MCP9538842.1;transl_table=11 JANDXE010000068.1 Genbank gene 1341 2064 . - . ID=gene-NND05_15130;Name=NND05_15130;end_range=2064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15130;partial=true JANDXE010000068.1 GeneMarkS-2+ CDS 1341 2064 . - 1 ID=cds-MCP9538843.1;Parent=gene-NND05_15130;Dbxref=NCBI_GP:MCP9538843.1;Name=MCP9538843.1;end_range=2064,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15130;partial=true;product=hypothetical protein;protein_id=MCP9538843.1;transl_table=11 ##sequence-region JANDXE010000069.1 1 1816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000069.1 Genbank region 1 1816 . + . ID=JANDXE010000069.1:1..1816;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000069.1 Genbank gene 1 350 . + . ID=gene-NND05_15135;Name=NND05_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15135;partial=true;start_range=.,1 JANDXE010000069.1 Protein Homology CDS 1 350 . + 2 ID=cds-MCP9538844.1;Parent=gene-NND05_15135;Dbxref=NCBI_GP:MCP9538844.1;Name=MCP9538844.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008628591.1;locus_tag=NND05_15135;partial=true;product=tyrosine-type recombinase/integrase;protein_id=MCP9538844.1;start_range=.,1;transl_table=11 JANDXE010000069.1 Genbank gene 347 709 . + . ID=gene-NND05_15140;Name=NND05_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15140 JANDXE010000069.1 Protein Homology CDS 347 709 . + 0 ID=cds-MCP9538845.1;Parent=gene-NND05_15140;Dbxref=NCBI_GP:MCP9538845.1;Name=MCP9538845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011108658.1;locus_tag=NND05_15140;product=hypothetical protein;protein_id=MCP9538845.1;transl_table=11 JANDXE010000069.1 Genbank gene 1496 1804 . - . ID=gene-NND05_15145;Name=NND05_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15145 JANDXE010000069.1 Protein Homology CDS 1496 1804 . - 0 ID=cds-MCP9538846.1;Parent=gene-NND05_15145;Dbxref=NCBI_GP:MCP9538846.1;Name=MCP9538846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055857.1;locus_tag=NND05_15145;product=helix-turn-helix domain-containing protein;protein_id=MCP9538846.1;transl_table=11 ##sequence-region JANDXE010000070.1 1 1409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000070.1 Genbank region 1 1409 . + . ID=JANDXE010000070.1:1..1409;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000070.1 Genbank gene 1 1321 . + . ID=gene-NND05_15150;Name=NND05_15150;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15150;partial=true;start_range=.,1 JANDXE010000070.1 cmsearch rRNA 1 1321 . + . ID=rna-NND05_15150;Parent=gene-NND05_15150;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15150;partial=true;product=16S ribosomal RNA;start_range=.,1 JANDXE010000070.1 cmsearch exon 1 1321 . + . ID=exon-NND05_15150-1;Parent=rna-NND05_15150;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15150;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region JANDXE010000071.1 1 1382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000071.1 Genbank region 1 1382 . + . ID=JANDXE010000071.1:1..1382;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000071.1 Genbank gene 244 1353 . + . ID=gene-NND05_15155;Name=NND05_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15155 JANDXE010000071.1 Protein Homology CDS 244 1353 . + 0 ID=cds-MCP9538847.1;Parent=gene-NND05_15155;Dbxref=NCBI_GP:MCP9538847.1;Name=MCP9538847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010185801.1;locus_tag=NND05_15155;product=transposase;protein_id=MCP9538847.1;transl_table=11 ##sequence-region JANDXE010000072.1 1 1352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000072.1 Genbank region 1 1352 . + . ID=JANDXE010000072.1:1..1352;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000072.1 Genbank gene 49 1035 . - . ID=gene-NND05_15160;Name=NND05_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15160 JANDXE010000072.1 Protein Homology CDS 49 1035 . - 0 ID=cds-MCP9538848.1;Parent=gene-NND05_15160;Dbxref=NCBI_GP:MCP9538848.1;Name=MCP9538848.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033542.1;locus_tag=NND05_15160;product=IS110 family transposase;protein_id=MCP9538848.1;transl_table=11 ##sequence-region JANDXE010000006.1 1 133019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000006.1 Genbank region 1 133019 . + . ID=JANDXE010000006.1:1..133019;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000006.1 Genbank gene 472 2595 . - . ID=gene-NND05_04585;Name=NND05_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04585 JANDXE010000006.1 Protein Homology CDS 472 2595 . - 0 ID=cds-MCP9536836.1;Parent=gene-NND05_04585;Dbxref=NCBI_GP:MCP9536836.1;Name=MCP9536836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017116.2;locus_tag=NND05_04585;product=hypothetical protein;protein_id=MCP9536836.1;transl_table=11 JANDXE010000006.1 Genbank gene 3312 6497 . - . ID=gene-NND05_04590;Name=NND05_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04590 JANDXE010000006.1 Protein Homology CDS 3312 6497 . - 0 ID=cds-MCP9536837.1;Parent=gene-NND05_04590;Dbxref=NCBI_GP:MCP9536837.1;Name=MCP9536837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009236695.1;locus_tag=NND05_04590;product=efflux RND transporter permease subunit;protein_id=MCP9536837.1;transl_table=11 JANDXE010000006.1 Genbank gene 6516 7613 . - . ID=gene-NND05_04595;Name=NND05_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04595 JANDXE010000006.1 Protein Homology CDS 6516 7613 . - 0 ID=cds-MCP9536838.1;Parent=gene-NND05_04595;Dbxref=NCBI_GP:MCP9536838.1;Name=MCP9536838.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=NND05_04595;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9536838.1;transl_table=11 JANDXE010000006.1 Genbank gene 7776 8996 . + . ID=gene-NND05_04600;Name=NND05_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04600 JANDXE010000006.1 Protein Homology CDS 7776 8996 . + 0 ID=cds-MCP9536839.1;Parent=gene-NND05_04600;Dbxref=NCBI_GP:MCP9536839.1;Name=MCP9536839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013264597.1;locus_tag=NND05_04600;product=glycoside hydrolase family 27 protein;protein_id=MCP9536839.1;transl_table=11 JANDXE010000006.1 Genbank gene 9254 10198 . + . ID=gene-NND05_04605;Name=NND05_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04605 JANDXE010000006.1 Protein Homology CDS 9254 10198 . + 0 ID=cds-MCP9536840.1;Parent=gene-NND05_04605;Dbxref=NCBI_GP:MCP9536840.1;Name=MCP9536840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004377552.1;locus_tag=NND05_04605;product=hypothetical protein;protein_id=MCP9536840.1;transl_table=11 JANDXE010000006.1 Genbank gene 10308 10907 . - . ID=gene-NND05_04610;Name=NND05_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04610 JANDXE010000006.1 Protein Homology CDS 10308 10907 . - 0 ID=cds-MCP9536841.1;Parent=gene-NND05_04610;Dbxref=NCBI_GP:MCP9536841.1;Name=MCP9536841.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411657.1;locus_tag=NND05_04610;product=AbgT family transporter;protein_id=MCP9536841.1;transl_table=11 JANDXE010000006.1 Genbank gene 10897 11622 . - . ID=gene-NND05_04615;Name=NND05_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04615 JANDXE010000006.1 Protein Homology CDS 10897 11622 . - 0 ID=cds-MCP9536842.1;Parent=gene-NND05_04615;Dbxref=NCBI_GP:MCP9536842.1;Name=MCP9536842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360606.1;locus_tag=NND05_04615;product=DUF5932 domain-containing protein;protein_id=MCP9536842.1;transl_table=11 JANDXE010000006.1 Genbank gene 11619 15149 . - . ID=gene-NND05_04620;Name=NND05_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04620 JANDXE010000006.1 Protein Homology CDS 11619 15149 . - 0 ID=cds-MCP9536843.1;Parent=gene-NND05_04620;Dbxref=NCBI_GP:MCP9536843.1;Name=MCP9536843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462257.1;locus_tag=NND05_04620;product=DUF5112 domain-containing protein;protein_id=MCP9536843.1;transl_table=11 JANDXE010000006.1 Genbank gene 15155 15826 . - . ID=gene-NND05_04625;Name=NND05_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04625 JANDXE010000006.1 Protein Homology CDS 15155 15826 . - 0 ID=cds-MCP9536844.1;Parent=gene-NND05_04625;Dbxref=NCBI_GP:MCP9536844.1;Name=MCP9536844.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411656.1;locus_tag=NND05_04625;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=MCP9536844.1;transl_table=11 JANDXE010000006.1 Genbank gene 15849 16871 . - . ID=gene-NND05_04630;Name=NND05_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04630 JANDXE010000006.1 Protein Homology CDS 15849 16871 . - 0 ID=cds-MCP9536845.1;Parent=gene-NND05_04630;Dbxref=NCBI_GP:MCP9536845.1;Name=MCP9536845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013619441.1;locus_tag=NND05_04630;product=sugar kinase;protein_id=MCP9536845.1;transl_table=11 JANDXE010000006.1 Genbank gene 17258 18322 . + . ID=gene-NND05_04635;Name=NND05_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04635 JANDXE010000006.1 Protein Homology CDS 17258 18322 . + 0 ID=cds-MCP9536846.1;Parent=gene-NND05_04635;Dbxref=NCBI_GP:MCP9536846.1;Name=MCP9536846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340966.1;locus_tag=NND05_04635;product=substrate-binding domain-containing protein;protein_id=MCP9536846.1;transl_table=11 JANDXE010000006.1 Genbank gene 18402 19712 . + . ID=gene-NND05_04640;Name=NND05_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04640 JANDXE010000006.1 Protein Homology CDS 18402 19712 . + 0 ID=cds-MCP9536847.1;Parent=gene-NND05_04640;Dbxref=NCBI_GP:MCP9536847.1;Name=MCP9536847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340964.1;locus_tag=NND05_04640;product=Na+/H+ antiporter NhaC family protein;protein_id=MCP9536847.1;transl_table=11 JANDXE010000006.1 Genbank gene 19761 20456 . + . ID=gene-NND05_04645;Name=NND05_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04645 JANDXE010000006.1 Protein Homology CDS 19761 20456 . + 0 ID=cds-MCP9536848.1;Parent=gene-NND05_04645;Dbxref=NCBI_GP:MCP9536848.1;Name=MCP9536848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346023.1;locus_tag=NND05_04645;product=hypothetical protein;protein_id=MCP9536848.1;transl_table=11 JANDXE010000006.1 Genbank gene 20524 21210 . + . ID=gene-NND05_04650;Name=NND05_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04650 JANDXE010000006.1 Protein Homology CDS 20524 21210 . + 0 ID=cds-MCP9536849.1;Parent=gene-NND05_04650;Dbxref=NCBI_GP:MCP9536849.1;Name=MCP9536849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846594.1;locus_tag=NND05_04650;product=glycosyl hydrolase family 25;protein_id=MCP9536849.1;transl_table=11 JANDXE010000006.1 Genbank gene 21335 22603 . + . ID=gene-NND05_04655;Name=NND05_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04655 JANDXE010000006.1 Protein Homology CDS 21335 22603 . + 0 ID=cds-MCP9536850.1;Parent=gene-NND05_04655;Dbxref=NCBI_GP:MCP9536850.1;Name=MCP9536850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340957.1;locus_tag=NND05_04655;product=zinc ribbon domain-containing protein;protein_id=MCP9536850.1;transl_table=11 JANDXE010000006.1 Genbank gene 22726 23502 . - . ID=gene-NND05_04660;Name=NND05_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04660 JANDXE010000006.1 Protein Homology CDS 22726 23502 . - 0 ID=cds-MCP9536851.1;Parent=gene-NND05_04660;Dbxref=NCBI_GP:MCP9536851.1;Name=MCP9536851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952488.1;locus_tag=NND05_04660;product=DnaJ domain-containing protein;protein_id=MCP9536851.1;transl_table=11 JANDXE010000006.1 Genbank gene 23615 25378 . + . ID=gene-NND05_04665;Name=NND05_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04665 JANDXE010000006.1 Protein Homology CDS 23615 25378 . + 0 ID=cds-MCP9536852.1;Parent=gene-NND05_04665;Dbxref=NCBI_GP:MCP9536852.1;Name=MCP9536852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846591.1;locus_tag=NND05_04665;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=MCP9536852.1;transl_table=11 JANDXE010000006.1 Genbank gene 25382 26158 . + . ID=gene-NND05_04670;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=NND05_04670 JANDXE010000006.1 Protein Homology CDS 25382 26158 . + 0 ID=cds-MCP9536853.1;Parent=gene-NND05_04670;Dbxref=NCBI_GP:MCP9536853.1;Name=MCP9536853.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846590.1;locus_tag=NND05_04670;product=NAD(+) diphosphatase;protein_id=MCP9536853.1;transl_table=11 JANDXE010000006.1 Genbank gene 26239 27417 . + . ID=gene-NND05_04675;Name=NND05_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04675 JANDXE010000006.1 Protein Homology CDS 26239 27417 . + 0 ID=cds-MCP9536854.1;Parent=gene-NND05_04675;Dbxref=NCBI_GP:MCP9536854.1;Name=MCP9536854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846589.1;locus_tag=NND05_04675;product=MFS transporter;protein_id=MCP9536854.1;transl_table=11 JANDXE010000006.1 Genbank gene 27681 28124 . - . ID=gene-NND05_04680;Name=NND05_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04680 JANDXE010000006.1 Protein Homology CDS 27681 28124 . - 0 ID=cds-MCP9536855.1;Parent=gene-NND05_04680;Dbxref=NCBI_GP:MCP9536855.1;Name=MCP9536855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342421.1;locus_tag=NND05_04680;product=DUF3127 domain-containing protein;protein_id=MCP9536855.1;transl_table=11 JANDXE010000006.1 Genbank gene 28432 29553 . + . ID=gene-NND05_04685;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NND05_04685 JANDXE010000006.1 Protein Homology CDS 28432 29553 . + 0 ID=cds-MCP9536856.1;Parent=gene-NND05_04685;Dbxref=NCBI_GP:MCP9536856.1;Name=MCP9536856.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133945.1;locus_tag=NND05_04685;product=DNA polymerase III subunit beta;protein_id=MCP9536856.1;transl_table=11 JANDXE010000006.1 Genbank gene 29618 30481 . + . ID=gene-NND05_04690;Name=NND05_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04690 JANDXE010000006.1 Protein Homology CDS 29618 30481 . + 0 ID=cds-MCP9536857.1;Parent=gene-NND05_04690;Dbxref=NCBI_GP:MCP9536857.1;Name=MCP9536857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846586.1;locus_tag=NND05_04690;product=3'-5' exonuclease;protein_id=MCP9536857.1;transl_table=11 JANDXE010000006.1 Genbank gene 30483 31727 . + . ID=gene-NND05_04695;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NND05_04695 JANDXE010000006.1 Protein Homology CDS 30483 31727 . + 0 ID=cds-MCP9536858.1;Parent=gene-NND05_04695;Dbxref=NCBI_GP:MCP9536858.1;Name=MCP9536858.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412299.1;locus_tag=NND05_04695;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=MCP9536858.1;transl_table=11 JANDXE010000006.1 Genbank gene 31663 32628 . + . ID=gene-NND05_04700;Name=NND05_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04700 JANDXE010000006.1 Protein Homology CDS 31663 32628 . + 0 ID=cds-MCP9536859.1;Parent=gene-NND05_04700;Dbxref=NCBI_GP:MCP9536859.1;Name=MCP9536859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004365867.1;locus_tag=NND05_04700;product=DUF4835 family protein;protein_id=MCP9536859.1;transl_table=11 JANDXE010000006.1 Genbank gene 32759 34417 . + . ID=gene-NND05_04705;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NND05_04705 JANDXE010000006.1 Protein Homology CDS 32759 34417 . + 0 ID=cds-MCP9536860.1;Parent=gene-NND05_04705;Dbxref=NCBI_GP:MCP9536860.1;Name=MCP9536860.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342432.1;locus_tag=NND05_04705;product=DNA repair protein RecN;protein_id=MCP9536860.1;transl_table=11 JANDXE010000006.1 Genbank gene 34414 36063 . + . ID=gene-NND05_04710;Name=NND05_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04710 JANDXE010000006.1 Protein Homology CDS 34414 36063 . + 0 ID=cds-MCP9536861.1;Parent=gene-NND05_04710;Dbxref=NCBI_GP:MCP9536861.1;Name=MCP9536861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846582.1;locus_tag=NND05_04710;product=tetratricopeptide repeat protein;protein_id=MCP9536861.1;transl_table=11 JANDXE010000006.1 Genbank gene 36538 36612 . - . ID=gene-NND05_04715;Name=NND05_04715;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04715 JANDXE010000006.1 tRNAscan-SE tRNA 36538 36612 . - . ID=rna-NND05_04715;Parent=gene-NND05_04715;anticodon=(pos:complement(36575..36577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04715;product=tRNA-Arg JANDXE010000006.1 tRNAscan-SE exon 36538 36612 . - . ID=exon-NND05_04715-1;Parent=rna-NND05_04715;anticodon=(pos:complement(36575..36577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04715;product=tRNA-Arg JANDXE010000006.1 Genbank gene 36832 40746 . - . ID=gene-NND05_04720;Name=NND05_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04720 JANDXE010000006.1 Protein Homology CDS 36832 40746 . - 0 ID=cds-MCP9536862.1;Parent=gene-NND05_04720;Dbxref=NCBI_GP:MCP9536862.1;Name=MCP9536862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005636345.1;locus_tag=NND05_04720;product=discoidin domain-containing protein;protein_id=MCP9536862.1;transl_table=11 JANDXE010000006.1 Genbank gene 41015 42169 . + . ID=gene-NND05_04725;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=NND05_04725 JANDXE010000006.1 Protein Homology CDS 41015 42169 . + 0 ID=cds-MCP9536863.1;Parent=gene-NND05_04725;Dbxref=NCBI_GP:MCP9536863.1;Name=MCP9536863.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005812198.1;locus_tag=NND05_04725;product=lactaldehyde reductase;protein_id=MCP9536863.1;transl_table=11 JANDXE010000006.1 Genbank gene 42334 42669 . - . ID=gene-NND05_04730;Name=NND05_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04730 JANDXE010000006.1 Protein Homology CDS 42334 42669 . - 0 ID=cds-MCP9536864.1;Parent=gene-NND05_04730;Dbxref=NCBI_GP:MCP9536864.1;Name=MCP9536864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275458.1;locus_tag=NND05_04730;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MCP9536864.1;transl_table=11 JANDXE010000006.1 Genbank gene 42659 42919 . - . ID=gene-NND05_04735;Name=NND05_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04735 JANDXE010000006.1 Protein Homology CDS 42659 42919 . - 0 ID=cds-MCP9536865.1;Parent=gene-NND05_04735;Dbxref=NCBI_GP:MCP9536865.1;Name=MCP9536865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846791.1;locus_tag=NND05_04735;product=hypothetical protein;protein_id=MCP9536865.1;transl_table=11 JANDXE010000006.1 Genbank gene 43585 44052 . - . ID=gene-NND05_04740;Name=NND05_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04740 JANDXE010000006.1 Protein Homology CDS 43585 44052 . - 0 ID=cds-MCP9536866.1;Parent=gene-NND05_04740;Dbxref=NCBI_GP:MCP9536866.1;Name=MCP9536866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848999.1;locus_tag=NND05_04740;product=lipocalin-like domain-containing protein;protein_id=MCP9536866.1;transl_table=11 JANDXE010000006.1 Genbank gene 44074 45657 . - . ID=gene-NND05_04745;Name=NND05_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04745 JANDXE010000006.1 Protein Homology CDS 44074 45657 . - 0 ID=cds-MCP9536867.1;Parent=gene-NND05_04745;Dbxref=NCBI_GP:MCP9536867.1;Name=MCP9536867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848998.1;locus_tag=NND05_04745;product=capsule assembly Wzi family protein;protein_id=MCP9536867.1;transl_table=11 JANDXE010000006.1 Genbank gene 45863 46912 . + . ID=gene-NND05_04750;Name=NND05_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04750 JANDXE010000006.1 Protein Homology CDS 45863 46912 . + 0 ID=cds-MCP9536868.1;Parent=gene-NND05_04750;Dbxref=NCBI_GP:MCP9536868.1;Name=MCP9536868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360635.1;locus_tag=NND05_04750;product=chain-length determining protein;protein_id=MCP9536868.1;transl_table=11 JANDXE010000006.1 Genbank gene 46933 48486 . + . ID=gene-NND05_04755;Name=NND05_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04755 JANDXE010000006.1 GeneMarkS-2+ CDS 46933 48486 . + 0 ID=cds-MCP9536869.1;Parent=gene-NND05_04755;Dbxref=NCBI_GP:MCP9536869.1;Name=MCP9536869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04755;product=polysaccharide biosynthesis protein;protein_id=MCP9536869.1;transl_table=11 JANDXE010000006.1 Genbank gene 48610 49557 . + . ID=gene-NND05_04760;Name=NND05_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04760 JANDXE010000006.1 Protein Homology CDS 48610 49557 . + 0 ID=cds-MCP9536870.1;Parent=gene-NND05_04760;Dbxref=NCBI_GP:MCP9536870.1;Name=MCP9536870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.2;locus_tag=NND05_04760;product=EpsG family protein;protein_id=MCP9536870.1;transl_table=11 JANDXE010000006.1 Genbank gene 49571 50722 . + . ID=gene-NND05_04765;Name=NND05_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04765 JANDXE010000006.1 Protein Homology CDS 49571 50722 . + 0 ID=cds-MCP9536871.1;Parent=gene-NND05_04765;Dbxref=NCBI_GP:MCP9536871.1;Name=MCP9536871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004314908.1;locus_tag=NND05_04765;product=glycoside hydrolase family 99-like domain-containing protein;protein_id=MCP9536871.1;transl_table=11 JANDXE010000006.1 Genbank gene 50724 51539 . + . ID=gene-NND05_04770;Name=NND05_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04770 JANDXE010000006.1 GeneMarkS-2+ CDS 50724 51539 . + 0 ID=cds-MCP9536872.1;Parent=gene-NND05_04770;Dbxref=NCBI_GP:MCP9536872.1;Name=MCP9536872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04770;product=hypothetical protein;protein_id=MCP9536872.1;transl_table=11 JANDXE010000006.1 Genbank gene 51547 52368 . + . ID=gene-NND05_04775;Name=NND05_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04775 JANDXE010000006.1 Protein Homology CDS 51547 52368 . + 0 ID=cds-MCP9536873.1;Parent=gene-NND05_04775;Dbxref=NCBI_GP:MCP9536873.1;Name=MCP9536873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NND05_04775;product=glycosyltransferase family 2 protein;protein_id=MCP9536873.1;transl_table=11 JANDXE010000006.1 Genbank gene 52435 53244 . + . ID=gene-NND05_04780;Name=NND05_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04780 JANDXE010000006.1 Protein Homology CDS 52435 53244 . + 0 ID=cds-MCP9536874.1;Parent=gene-NND05_04780;Dbxref=NCBI_GP:MCP9536874.1;Name=MCP9536874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857330.1;locus_tag=NND05_04780;product=glycosyltransferase;protein_id=MCP9536874.1;transl_table=11 JANDXE010000006.1 Genbank gene 53301 53936 . + . ID=gene-NND05_04785;Name=NND05_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04785 JANDXE010000006.1 Protein Homology CDS 53301 53936 . + 0 ID=cds-MCP9536875.1;Parent=gene-NND05_04785;Dbxref=NCBI_GP:MCP9536875.1;Name=MCP9536875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780473.1;locus_tag=NND05_04785;product=sugar transferase;protein_id=MCP9536875.1;transl_table=11 JANDXE010000006.1 Genbank gene 54035 55309 . - . ID=gene-NND05_04790;Name=NND05_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04790 JANDXE010000006.1 Protein Homology CDS 54035 55309 . - 0 ID=cds-MCP9536876.1;Parent=gene-NND05_04790;Dbxref=NCBI_GP:MCP9536876.1;Name=MCP9536876.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=NND05_04790;product=TolC family protein;protein_id=MCP9536876.1;transl_table=11 JANDXE010000006.1 Genbank gene 55341 58532 . - . ID=gene-NND05_04795;Name=NND05_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04795 JANDXE010000006.1 Protein Homology CDS 55341 58532 . - 0 ID=cds-MCP9536877.1;Parent=gene-NND05_04795;Dbxref=NCBI_GP:MCP9536877.1;Name=MCP9536877.1;Ontology_term=GO:0051139,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=metal ion:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846620.1;locus_tag=NND05_04795;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=MCP9536877.1;transl_table=11 JANDXE010000006.1 Genbank gene 58574 59821 . - . ID=gene-NND05_04800;Name=NND05_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04800 JANDXE010000006.1 Protein Homology CDS 58574 59821 . - 0 ID=cds-MCP9536878.1;Parent=gene-NND05_04800;Dbxref=NCBI_GP:MCP9536878.1;Name=MCP9536878.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=NND05_04800;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9536878.1;transl_table=11 JANDXE010000006.1 Genbank gene 59978 60355 . - . ID=gene-NND05_04805;Name=NND05_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04805 JANDXE010000006.1 GeneMarkS-2+ CDS 59978 60355 . - 0 ID=cds-MCP9536879.1;Parent=gene-NND05_04805;Dbxref=NCBI_GP:MCP9536879.1;Name=MCP9536879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04805;product=hypothetical protein;protein_id=MCP9536879.1;transl_table=11 JANDXE010000006.1 Genbank gene 60574 62649 . + . ID=gene-NND05_04810;Name=NND05_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04810 JANDXE010000006.1 Protein Homology CDS 60574 62649 . + 0 ID=cds-MCP9536880.1;Parent=gene-NND05_04810;Dbxref=NCBI_GP:MCP9536880.1;Name=MCP9536880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845068.1;locus_tag=NND05_04810;product=thioredoxin family protein;protein_id=MCP9536880.1;transl_table=11 JANDXE010000006.1 Genbank gene 62764 64068 . + . ID=gene-NND05_04815;Name=NND05_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04815 JANDXE010000006.1 Protein Homology CDS 62764 64068 . + 0 ID=cds-MCP9536881.1;Parent=gene-NND05_04815;Dbxref=NCBI_GP:MCP9536881.1;Name=MCP9536881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346909.1;locus_tag=NND05_04815;product=GTP-binding protein;protein_id=MCP9536881.1;transl_table=11 JANDXE010000006.1 Genbank gene 64313 64837 . + . ID=gene-NND05_04820;Name=NND05_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04820 JANDXE010000006.1 Protein Homology CDS 64313 64837 . + 0 ID=cds-MCP9536882.1;Parent=gene-NND05_04820;Dbxref=NCBI_GP:MCP9536882.1;Name=MCP9536882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967945.1;locus_tag=NND05_04820;product=GNAT family N-acetyltransferase;protein_id=MCP9536882.1;transl_table=11 JANDXE010000006.1 Genbank gene 64853 66820 . + . ID=gene-NND05_04825;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NND05_04825 JANDXE010000006.1 Protein Homology CDS 64853 66820 . + 0 ID=cds-MCP9536883.1;Parent=gene-NND05_04825;Dbxref=NCBI_GP:MCP9536883.1;Name=MCP9536883.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566081.1;locus_tag=NND05_04825;product=NAD-dependent DNA ligase LigA;protein_id=MCP9536883.1;transl_table=11 JANDXE010000006.1 Genbank gene 66882 68171 . - . ID=gene-NND05_04830;Name=NND05_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04830 JANDXE010000006.1 Protein Homology CDS 66882 68171 . - 0 ID=cds-MCP9536884.1;Parent=gene-NND05_04830;Dbxref=NCBI_GP:MCP9536884.1;Name=MCP9536884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846669.1;locus_tag=NND05_04830;product=serpin family protein;protein_id=MCP9536884.1;transl_table=11 JANDXE010000006.1 Genbank gene 68246 69313 . - . ID=gene-NND05_04835;Name=NND05_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04835 JANDXE010000006.1 Protein Homology CDS 68246 69313 . - 0 ID=cds-MCP9536885.1;Parent=gene-NND05_04835;Dbxref=NCBI_GP:MCP9536885.1;Name=MCP9536885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345830.1;locus_tag=NND05_04835;product=hypothetical protein;protein_id=MCP9536885.1;transl_table=11 JANDXE010000006.1 Genbank gene 69485 70675 . + . ID=gene-NND05_04840;Name=NND05_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04840 JANDXE010000006.1 Protein Homology CDS 69485 70675 . + 0 ID=cds-MCP9536886.1;Parent=gene-NND05_04840;Dbxref=NCBI_GP:MCP9536886.1;Name=MCP9536886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345828.1;locus_tag=NND05_04840;product=AAA family ATPase;protein_id=MCP9536886.1;transl_table=11 JANDXE010000006.1 Genbank gene 70736 74314 . + . ID=gene-NND05_04845;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=NND05_04845 JANDXE010000006.1 Protein Homology CDS 70736 74314 . + 0 ID=cds-MCP9536887.1;Parent=gene-NND05_04845;Dbxref=NCBI_GP:MCP9536887.1;Name=MCP9536887.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846674.1;locus_tag=NND05_04845;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=MCP9536887.1;transl_table=11 JANDXE010000006.1 Genbank gene 74453 74659 . - . ID=gene-NND05_04850;Name=NND05_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04850 JANDXE010000006.1 GeneMarkS-2+ CDS 74453 74659 . - 0 ID=cds-MCP9536888.1;Parent=gene-NND05_04850;Dbxref=NCBI_GP:MCP9536888.1;Name=MCP9536888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04850;product=hypothetical protein;protein_id=MCP9536888.1;transl_table=11 JANDXE010000006.1 Genbank gene 75901 78519 . + . ID=gene-NND05_04855;Name=NND05_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04855 JANDXE010000006.1 Protein Homology CDS 75901 78519 . + 0 ID=cds-MCP9536889.1;Parent=gene-NND05_04855;Dbxref=NCBI_GP:MCP9536889.1;Name=MCP9536889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846796.1;locus_tag=NND05_04855;product=SLBB domain-containing protein;protein_id=MCP9536889.1;transl_table=11 JANDXE010000006.1 Genbank gene 78631 80214 . - . ID=gene-NND05_04860;Name=NND05_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04860 JANDXE010000006.1 Protein Homology CDS 78631 80214 . - 0 ID=cds-MCP9536890.1;Parent=gene-NND05_04860;Dbxref=NCBI_GP:MCP9536890.1;Name=MCP9536890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848731.1;locus_tag=NND05_04860;product=FAD-binding protein;protein_id=MCP9536890.1;transl_table=11 JANDXE010000006.1 Genbank gene 80289 80834 . - . ID=gene-NND05_04865;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=NND05_04865 JANDXE010000006.1 Protein Homology CDS 80289 80834 . - 0 ID=cds-MCP9536891.1;Parent=gene-NND05_04865;Dbxref=NCBI_GP:MCP9536891.1;Name=MCP9536891.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006953488.1;locus_tag=NND05_04865;product=phosphodiesterase;protein_id=MCP9536891.1;transl_table=11 JANDXE010000006.1 Genbank gene 81131 83572 . + . ID=gene-NND05_04870;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=NND05_04870 JANDXE010000006.1 Protein Homology CDS 81131 83572 . + 0 ID=cds-MCP9536892.1;Parent=gene-NND05_04870;Dbxref=NCBI_GP:MCP9536892.1;Name=MCP9536892.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566339.1;locus_tag=NND05_04870;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=MCP9536892.1;transl_table=11 JANDXE010000006.1 Genbank gene 83606 84856 . + . ID=gene-NND05_04875;Name=NND05_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04875 JANDXE010000006.1 Protein Homology CDS 83606 84856 . + 0 ID=cds-MCP9536893.1;Parent=gene-NND05_04875;Dbxref=NCBI_GP:MCP9536893.1;Name=MCP9536893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848736.1;locus_tag=NND05_04875;product=cofactor-independent phosphoglycerate mutase;protein_id=MCP9536893.1;transl_table=11 JANDXE010000006.1 Genbank gene 84957 86258 . + . ID=gene-NND05_04880;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=NND05_04880 JANDXE010000006.1 Protein Homology CDS 84957 86258 . + 0 ID=cds-MCP9536894.1;Parent=gene-NND05_04880;Dbxref=NCBI_GP:MCP9536894.1;Name=MCP9536894.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008618430.1;locus_tag=NND05_04880;product=threonine synthase;protein_id=MCP9536894.1;transl_table=11 JANDXE010000006.1 Genbank gene 86281 86976 . + . ID=gene-NND05_04885;Name=NND05_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04885 JANDXE010000006.1 Protein Homology CDS 86281 86976 . + 0 ID=cds-MCP9536895.1;Parent=gene-NND05_04885;Dbxref=NCBI_GP:MCP9536895.1;Name=MCP9536895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281111.1;locus_tag=NND05_04885;product=YhcH/YjgK/YiaL family protein;protein_id=MCP9536895.1;transl_table=11 JANDXE010000006.1 Genbank gene 87024 87980 . + . ID=gene-NND05_04890;Name=NND05_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04890 JANDXE010000006.1 Protein Homology CDS 87024 87980 . + 0 ID=cds-MCP9536896.1;Parent=gene-NND05_04890;Dbxref=NCBI_GP:MCP9536896.1;Name=MCP9536896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133858.1;locus_tag=NND05_04890;product=D-2-hydroxyacid dehydrogenase;protein_id=MCP9536896.1;transl_table=11 JANDXE010000006.1 Genbank gene 88202 89242 . - . ID=gene-NND05_04895;Name=NND05_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04895 JANDXE010000006.1 Protein Homology CDS 88202 89242 . - 0 ID=cds-MCP9536897.1;Parent=gene-NND05_04895;Dbxref=NCBI_GP:MCP9536897.1;Name=MCP9536897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018464696.1;locus_tag=NND05_04895;product=iron ABC transporter permease;protein_id=MCP9536897.1;transl_table=11 JANDXE010000006.1 Genbank gene 89248 90456 . - . ID=gene-NND05_04900;Name=NND05_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04900 JANDXE010000006.1 Protein Homology CDS 89248 90456 . - 0 ID=cds-MCP9536898.1;Parent=gene-NND05_04900;Dbxref=NCBI_GP:MCP9536898.1;Name=MCP9536898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006949976.1;locus_tag=NND05_04900;product=ABC transporter substrate-binding protein;protein_id=MCP9536898.1;transl_table=11 JANDXE010000006.1 Genbank gene 90602 91810 . - . ID=gene-NND05_04905;Name=NND05_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04905 JANDXE010000006.1 Protein Homology CDS 90602 91810 . - 0 ID=cds-MCP9536899.1;Parent=gene-NND05_04905;Dbxref=NCBI_GP:MCP9536899.1;Name=MCP9536899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846793.1;locus_tag=NND05_04905;product=hypothetical protein;protein_id=MCP9536899.1;transl_table=11 JANDXE010000006.1 Genbank gene 91888 94500 . - . ID=gene-NND05_04910;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=NND05_04910 JANDXE010000006.1 Protein Homology CDS 91888 94500 . - 0 ID=cds-MCP9536900.1;Parent=gene-NND05_04910;Dbxref=NCBI_GP:MCP9536900.1;Name=MCP9536900.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376669.1;locus_tag=NND05_04910;product=DNA gyrase subunit A;protein_id=MCP9536900.1;transl_table=11 JANDXE010000006.1 Genbank gene 94856 97690 . + . ID=gene-NND05_04915;Name=NND05_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04915 JANDXE010000006.1 Protein Homology CDS 94856 97690 . + 0 ID=cds-MCP9536901.1;Parent=gene-NND05_04915;Dbxref=NCBI_GP:MCP9536901.1;Name=MCP9536901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846795.1;locus_tag=NND05_04915;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCP9536901.1;transl_table=11 JANDXE010000006.1 Genbank gene 97843 97915 . + . ID=gene-NND05_04920;Name=NND05_04920;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04920 JANDXE010000006.1 tRNAscan-SE tRNA 97843 97915 . + . ID=rna-NND05_04920;Parent=gene-NND05_04920;anticodon=(pos:97876..97878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04920;product=tRNA-Thr JANDXE010000006.1 tRNAscan-SE exon 97843 97915 . + . ID=exon-NND05_04920-1;Parent=rna-NND05_04920;anticodon=(pos:97876..97878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04920;product=tRNA-Thr JANDXE010000006.1 Genbank gene 97968 98041 . + . ID=gene-NND05_04925;Name=NND05_04925;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_04925 JANDXE010000006.1 tRNAscan-SE tRNA 97968 98041 . + . ID=rna-NND05_04925;Parent=gene-NND05_04925;anticodon=(pos:98000..98002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04925;product=tRNA-Gly JANDXE010000006.1 tRNAscan-SE exon 97968 98041 . + . ID=exon-NND05_04925-1;Parent=rna-NND05_04925;anticodon=(pos:98000..98002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_04925;product=tRNA-Gly JANDXE010000006.1 Genbank gene 98341 99822 . + . ID=gene-NND05_04930;Name=NND05_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04930 JANDXE010000006.1 Protein Homology CDS 98341 99822 . + 0 ID=cds-MCP9536902.1;Parent=gene-NND05_04930;Dbxref=NCBI_GP:MCP9536902.1;Name=MCP9536902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376404.1;locus_tag=NND05_04930;product=tagaturonate reductase;protein_id=MCP9536902.1;transl_table=11 JANDXE010000006.1 Genbank gene 99986 100141 . - . ID=gene-NND05_04935;Name=NND05_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04935 JANDXE010000006.1 Protein Homology CDS 99986 100141 . - 0 ID=cds-MCP9536903.1;Parent=gene-NND05_04935;Dbxref=NCBI_GP:MCP9536903.1;Name=MCP9536903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343470.1;locus_tag=NND05_04935;product=sulfate transporter;protein_id=MCP9536903.1;transl_table=11 JANDXE010000006.1 Genbank pseudogene 100245 101156 . - . ID=gene-NND05_04940;Name=NND05_04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_04940;pseudo=true JANDXE010000006.1 Protein Homology CDS 100245 101156 . - 0 ID=cds-NND05_04940;Parent=gene-NND05_04940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133593.1;locus_tag=NND05_04940;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11 JANDXE010000006.1 Genbank gene 101770 102177 . + . ID=gene-NND05_04945;Name=NND05_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04945 JANDXE010000006.1 GeneMarkS-2+ CDS 101770 102177 . + 0 ID=cds-MCP9536904.1;Parent=gene-NND05_04945;Dbxref=NCBI_GP:MCP9536904.1;Name=MCP9536904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04945;product=hypothetical protein;protein_id=MCP9536904.1;transl_table=11 JANDXE010000006.1 Genbank gene 102189 102629 . + . ID=gene-NND05_04950;Name=NND05_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04950 JANDXE010000006.1 GeneMarkS-2+ CDS 102189 102629 . + 0 ID=cds-MCP9536905.1;Parent=gene-NND05_04950;Dbxref=NCBI_GP:MCP9536905.1;Name=MCP9536905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04950;product=hypothetical protein;protein_id=MCP9536905.1;transl_table=11 JANDXE010000006.1 Genbank gene 102881 103549 . + . ID=gene-NND05_04955;Name=NND05_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04955 JANDXE010000006.1 GeneMarkS-2+ CDS 102881 103549 . + 0 ID=cds-MCP9536906.1;Parent=gene-NND05_04955;Dbxref=NCBI_GP:MCP9536906.1;Name=MCP9536906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_04955;product=hypothetical protein;protein_id=MCP9536906.1;transl_table=11 JANDXE010000006.1 Genbank gene 103950 104816 . + . ID=gene-NND05_04960;Name=NND05_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04960 JANDXE010000006.1 Protein Homology CDS 103950 104816 . + 0 ID=cds-MCP9536907.1;Parent=gene-NND05_04960;Dbxref=NCBI_GP:MCP9536907.1;Name=MCP9536907.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037887.2;locus_tag=NND05_04960;product=hypothetical protein;protein_id=MCP9536907.1;transl_table=11 JANDXE010000006.1 Genbank gene 105787 106008 . + . ID=gene-NND05_04965;Name=NND05_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04965 JANDXE010000006.1 Protein Homology CDS 105787 106008 . + 0 ID=cds-MCP9536908.1;Parent=gene-NND05_04965;Dbxref=NCBI_GP:MCP9536908.1;Name=MCP9536908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656593.1;locus_tag=NND05_04965;product=hypothetical protein;protein_id=MCP9536908.1;transl_table=11 JANDXE010000006.1 Genbank gene 106201 107820 . + . ID=gene-NND05_04970;Name=NND05_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04970 JANDXE010000006.1 Protein Homology CDS 106201 107820 . + 0 ID=cds-MCP9536909.1;Parent=gene-NND05_04970;Dbxref=NCBI_GP:MCP9536909.1;Name=MCP9536909.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343096.1;locus_tag=NND05_04970;product=ATP-binding cassette domain-containing protein;protein_id=MCP9536909.1;transl_table=11 JANDXE010000006.1 Genbank gene 107942 108592 . + . ID=gene-NND05_04975;Name=NND05_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04975 JANDXE010000006.1 Protein Homology CDS 107942 108592 . + 0 ID=cds-MCP9536910.1;Parent=gene-NND05_04975;Dbxref=NCBI_GP:MCP9536910.1;Name=MCP9536910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343097.1;locus_tag=NND05_04975;product=nucleotide exchange factor GrpE;protein_id=MCP9536910.1;transl_table=11 JANDXE010000006.1 Genbank gene 108607 109767 . + . ID=gene-NND05_04980;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=NND05_04980 JANDXE010000006.1 Protein Homology CDS 108607 109767 . + 0 ID=cds-MCP9536911.1;Parent=gene-NND05_04980;Dbxref=NCBI_GP:MCP9536911.1;Name=MCP9536911.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846770.1;locus_tag=NND05_04980;product=molecular chaperone DnaJ;protein_id=MCP9536911.1;transl_table=11 JANDXE010000006.1 Genbank gene 109914 111167 . + . ID=gene-NND05_04985;Name=NND05_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04985 JANDXE010000006.1 Protein Homology CDS 109914 111167 . + 0 ID=cds-MCP9536912.1;Parent=gene-NND05_04985;Dbxref=NCBI_GP:MCP9536912.1;Name=MCP9536912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010448.1;locus_tag=NND05_04985;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MCP9536912.1;transl_table=11 JANDXE010000006.1 Genbank gene 111286 112374 . + . ID=gene-NND05_04990;Name=NND05_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04990 JANDXE010000006.1 Protein Homology CDS 111286 112374 . + 0 ID=cds-MCP9536913.1;Parent=gene-NND05_04990;Dbxref=NCBI_GP:MCP9536913.1;Name=MCP9536913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009010437.1;locus_tag=NND05_04990;product=galactose mutarotase;protein_id=MCP9536913.1;transl_table=11 JANDXE010000006.1 Genbank gene 112509 113855 . + . ID=gene-NND05_04995;Name=NND05_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_04995 JANDXE010000006.1 Protein Homology CDS 112509 113855 . + 0 ID=cds-MCP9536914.1;Parent=gene-NND05_04995;Dbxref=NCBI_GP:MCP9536914.1;Name=MCP9536914.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004349509.1;locus_tag=NND05_04995;product=MFS transporter;protein_id=MCP9536914.1;transl_table=11 JANDXE010000006.1 Genbank gene 113959 115119 . + . ID=gene-NND05_05000;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=NND05_05000 JANDXE010000006.1 Protein Homology CDS 113959 115119 . + 0 ID=cds-MCP9536915.1;Parent=gene-NND05_05000;Dbxref=NCBI_GP:MCP9536915.1;Name=MCP9536915.1;Ontology_term=GO:0006012,GO:0004335;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920393.1;locus_tag=NND05_05000;product=galactokinase;protein_id=MCP9536915.1;transl_table=11 JANDXE010000006.1 Genbank gene 115690 116877 . + . ID=gene-NND05_05005;Name=NND05_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05005 JANDXE010000006.1 Protein Homology CDS 115690 116877 . + 0 ID=cds-MCP9536916.1;Parent=gene-NND05_05005;Dbxref=NCBI_GP:MCP9536916.1;Name=MCP9536916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846775.1;locus_tag=NND05_05005;product=galactose mutarotase;protein_id=MCP9536916.1;transl_table=11 JANDXE010000006.1 Genbank gene 117030 118754 . + . ID=gene-NND05_05010;Name=NND05_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05010 JANDXE010000006.1 Protein Homology CDS 117030 118754 . + 0 ID=cds-MCP9536917.1;Parent=gene-NND05_05010;Dbxref=NCBI_GP:MCP9536917.1;Name=MCP9536917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008671067.1;locus_tag=NND05_05010;product=sodium:solute symporter;protein_id=MCP9536917.1;transl_table=11 JANDXE010000006.1 Genbank gene 118914 119594 . + . ID=gene-NND05_05015;Name=NND05_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05015 JANDXE010000006.1 Protein Homology CDS 118914 119594 . + 0 ID=cds-MCP9536918.1;Parent=gene-NND05_05015;Dbxref=NCBI_GP:MCP9536918.1;Name=MCP9536918.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346854.1;locus_tag=NND05_05015;product=NUDIX domain-containing protein;protein_id=MCP9536918.1;transl_table=11 JANDXE010000006.1 Genbank gene 119662 120360 . + . ID=gene-NND05_05020;Name=NND05_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05020 JANDXE010000006.1 Protein Homology CDS 119662 120360 . + 0 ID=cds-MCP9536919.1;Parent=gene-NND05_05020;Dbxref=NCBI_GP:MCP9536919.1;Name=MCP9536919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013065512.1;locus_tag=NND05_05020;product=L-ribulose-5-phosphate 4-epimerase;protein_id=MCP9536919.1;transl_table=11 JANDXE010000006.1 Genbank gene 120449 121990 . + . ID=gene-NND05_05025;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=NND05_05025 JANDXE010000006.1 Protein Homology CDS 120449 121990 . + 0 ID=cds-MCP9536920.1;Parent=gene-NND05_05025;Dbxref=NCBI_GP:MCP9536920.1;Name=MCP9536920.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846779.1;locus_tag=NND05_05025;product=L-arabinose isomerase;protein_id=MCP9536920.1;transl_table=11 JANDXE010000006.1 Genbank gene 122013 123605 . + . ID=gene-NND05_05030;Name=NND05_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05030 JANDXE010000006.1 Protein Homology CDS 122013 123605 . + 0 ID=cds-MCP9536921.1;Parent=gene-NND05_05030;Dbxref=NCBI_GP:MCP9536921.1;Name=MCP9536921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411715.1;locus_tag=NND05_05030;product=FGGY-family carbohydrate kinase;protein_id=MCP9536921.1;transl_table=11 JANDXE010000006.1 Genbank gene 123717 125291 . + . ID=gene-NND05_05035;Name=NND05_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05035 JANDXE010000006.1 Protein Homology CDS 123717 125291 . + 0 ID=cds-MCP9536922.1;Parent=gene-NND05_05035;Dbxref=NCBI_GP:MCP9536922.1;Name=MCP9536922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009131152.1;locus_tag=NND05_05035;product=alpha-N-arabinofuranosidase;protein_id=MCP9536922.1;transl_table=11 JANDXE010000006.1 Genbank gene 125404 127425 . + . ID=gene-NND05_05040;Name=NND05_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05040 JANDXE010000006.1 Protein Homology CDS 125404 127425 . + 0 ID=cds-MCP9536923.1;Parent=gene-NND05_05040;Dbxref=NCBI_GP:MCP9536923.1;Name=MCP9536923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846782.1;locus_tag=NND05_05040;product=transketolase;protein_id=MCP9536923.1;transl_table=11 JANDXE010000006.1 Genbank gene 127583 128026 . + . ID=gene-NND05_05045;Name=NND05_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05045 JANDXE010000006.1 Protein Homology CDS 127583 128026 . + 0 ID=cds-MCP9536924.1;Parent=gene-NND05_05045;Dbxref=NCBI_GP:MCP9536924.1;Name=MCP9536924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375043.1;locus_tag=NND05_05045;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=MCP9536924.1;transl_table=11 JANDXE010000006.1 Genbank gene 128104 128976 . + . ID=gene-NND05_05050;Name=NND05_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05050 JANDXE010000006.1 Protein Homology CDS 128104 128976 . + 0 ID=cds-MCP9536925.1;Parent=gene-NND05_05050;Dbxref=NCBI_GP:MCP9536925.1;Name=MCP9536925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370514.1;locus_tag=NND05_05050;product=nucleoside phosphorylase;protein_id=MCP9536925.1;transl_table=11 JANDXE010000006.1 Genbank gene 129157 130575 . + . ID=gene-NND05_05055;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NND05_05055 JANDXE010000006.1 Protein Homology CDS 129157 130575 . + 0 ID=cds-MCP9536926.1;Parent=gene-NND05_05055;Dbxref=NCBI_GP:MCP9536926.1;Name=MCP9536926.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283084.1;locus_tag=NND05_05055;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MCP9536926.1;transl_table=11 JANDXE010000006.1 Genbank gene 130886 131818 . + . ID=gene-NND05_05060;Name=NND05_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05060 JANDXE010000006.1 Protein Homology CDS 130886 131818 . + 0 ID=cds-MCP9536927.1;Parent=gene-NND05_05060;Dbxref=NCBI_GP:MCP9536927.1;Name=MCP9536927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01764.1;locus_tag=NND05_05060;product=helix-turn-helix domain-containing protein;protein_id=MCP9536927.1;transl_table=11 JANDXE010000006.1 Genbank gene 131943 133019 . + . ID=gene-NND05_05065;Name=NND05_05065;end_range=133019,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05065;partial=true JANDXE010000006.1 Protein Homology CDS 131943 133019 . + 0 ID=cds-MCP9536928.1;Parent=gene-NND05_05065;Dbxref=NCBI_GP:MCP9536928.1;Name=MCP9536928.1;end_range=133019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055851.1;locus_tag=NND05_05065;partial=true;product=site-specific integrase;protein_id=MCP9536928.1;transl_table=11 ##sequence-region JANDXE010000073.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000073.1 Genbank region 1 1024 . + . ID=JANDXE010000073.1:1..1024;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000073.1 Genbank gene 342 725 . - . ID=gene-NND05_15165;Name=NND05_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15165 JANDXE010000073.1 GeneMarkS-2+ CDS 342 725 . - 0 ID=cds-MCP9538849.1;Parent=gene-NND05_15165;Dbxref=NCBI_GP:MCP9538849.1;Name=MCP9538849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15165;product=hypothetical protein;protein_id=MCP9538849.1;transl_table=11 JANDXE010000073.1 Genbank gene 736 1024 . - . ID=gene-NND05_15170;Name=NND05_15170;end_range=1024,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15170;partial=true JANDXE010000073.1 Protein Homology CDS 736 1024 . - 1 ID=cds-MCP9538850.1;Parent=gene-NND05_15170;Dbxref=NCBI_GP:MCP9538850.1;Name=MCP9538850.1;end_range=1024,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024919.2;locus_tag=NND05_15170;partial=true;product=C39 family peptidase;protein_id=MCP9538850.1;transl_table=11 ##sequence-region JANDXE010000074.1 1 998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000074.1 Genbank region 1 998 . + . ID=JANDXE010000074.1:1..998;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000074.1 Genbank gene 8 319 . + . ID=gene-NND05_15175;Name=NND05_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15175 JANDXE010000074.1 Protein Homology CDS 8 319 . + 0 ID=cds-MCP9538851.1;Parent=gene-NND05_15175;Dbxref=NCBI_GP:MCP9538851.1;Name=MCP9538851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656559.1;locus_tag=NND05_15175;product=helix-turn-helix domain-containing protein;protein_id=MCP9538851.1;transl_table=11 JANDXE010000074.1 Genbank gene 402 710 . + . ID=gene-NND05_15180;Name=NND05_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15180 JANDXE010000074.1 Protein Homology CDS 402 710 . + 0 ID=cds-MCP9538852.1;Parent=gene-NND05_15180;Dbxref=NCBI_GP:MCP9538852.1;Name=MCP9538852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055857.1;locus_tag=NND05_15180;product=helix-turn-helix domain-containing protein;protein_id=MCP9538852.1;transl_table=11 ##sequence-region JANDXE010000075.1 1 913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000075.1 Genbank region 1 913 . + . ID=JANDXE010000075.1:1..913;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000075.1 Genbank gene 1 90 . + . ID=gene-NND05_15185;Name=NND05_15185;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15185;partial=true;start_range=.,1 JANDXE010000075.1 cmsearch rRNA 1 90 . + . ID=rna-NND05_15185;Parent=gene-NND05_15185;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15185;partial=true;product=16S ribosomal RNA;start_range=.,1 JANDXE010000075.1 cmsearch exon 1 90 . + . ID=exon-NND05_15185-1;Parent=rna-NND05_15185;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15185;partial=true;product=16S ribosomal RNA;start_range=.,1 JANDXE010000075.1 Genbank gene 224 297 . + . ID=gene-NND05_15190;Name=NND05_15190;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_15190 JANDXE010000075.1 tRNAscan-SE tRNA 224 297 . + . ID=rna-NND05_15190;Parent=gene-NND05_15190;anticodon=(pos:258..260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15190;product=tRNA-Ile JANDXE010000075.1 tRNAscan-SE exon 224 297 . + . ID=exon-NND05_15190-1;Parent=rna-NND05_15190;anticodon=(pos:258..260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15190;product=tRNA-Ile JANDXE010000075.1 Genbank gene 321 397 . + . ID=gene-NND05_15195;Name=NND05_15195;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_15195 JANDXE010000075.1 tRNAscan-SE tRNA 321 397 . + . ID=rna-NND05_15195;Parent=gene-NND05_15195;anticodon=(pos:355..357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15195;product=tRNA-Ala JANDXE010000075.1 tRNAscan-SE exon 321 397 . + . ID=exon-NND05_15195-1;Parent=rna-NND05_15195;anticodon=(pos:355..357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15195;product=tRNA-Ala JANDXE010000075.1 Genbank gene 592 913 . + . ID=gene-NND05_15200;Name=NND05_15200;end_range=913,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15200;partial=true JANDXE010000075.1 cmsearch rRNA 592 913 . + . ID=rna-NND05_15200;Parent=gene-NND05_15200;Dbxref=RFAM:RF02541;end_range=913,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15200;partial=true;product=23S ribosomal RNA JANDXE010000075.1 cmsearch exon 592 913 . + . ID=exon-NND05_15200-1;Parent=rna-NND05_15200;Dbxref=RFAM:RF02541;end_range=913,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15200;partial=true;product=23S ribosomal RNA ##sequence-region JANDXE010000076.1 1 888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000076.1 Genbank region 1 888 . + . ID=JANDXE010000076.1:1..888;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000076.1 Genbank gene 172 245 . + . ID=gene-NND05_15205;Name=NND05_15205;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_15205 JANDXE010000076.1 tRNAscan-SE tRNA 172 245 . + . ID=rna-NND05_15205;Parent=gene-NND05_15205;anticodon=(pos:206..208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15205;product=tRNA-Ile JANDXE010000076.1 tRNAscan-SE exon 172 245 . + . ID=exon-NND05_15205-1;Parent=rna-NND05_15205;anticodon=(pos:206..208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15205;product=tRNA-Ile JANDXE010000076.1 Genbank gene 313 389 . + . ID=gene-NND05_15210;Name=NND05_15210;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_15210 JANDXE010000076.1 tRNAscan-SE tRNA 313 389 . + . ID=rna-NND05_15210;Parent=gene-NND05_15210;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15210;product=tRNA-Ala JANDXE010000076.1 tRNAscan-SE exon 313 389 . + . ID=exon-NND05_15210-1;Parent=rna-NND05_15210;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_15210;product=tRNA-Ala JANDXE010000076.1 Genbank gene 597 888 . + . ID=gene-NND05_15215;Name=NND05_15215;end_range=888,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15215;partial=true JANDXE010000076.1 cmsearch rRNA 597 888 . + . ID=rna-NND05_15215;Parent=gene-NND05_15215;Dbxref=RFAM:RF02541;end_range=888,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15215;partial=true;product=23S ribosomal RNA JANDXE010000076.1 cmsearch exon 597 888 . + . ID=exon-NND05_15215-1;Parent=rna-NND05_15215;Dbxref=RFAM:RF02541;end_range=888,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15215;partial=true;product=23S ribosomal RNA ##sequence-region JANDXE010000077.1 1 888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000077.1 Genbank region 1 888 . + . ID=JANDXE010000077.1:1..888;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000077.1 Genbank gene 119 888 . + . ID=gene-NND05_15220;Name=NND05_15220;end_range=888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15220;partial=true JANDXE010000077.1 Protein Homology CDS 119 888 . + 0 ID=cds-MCP9538853.1;Parent=gene-NND05_15220;Dbxref=NCBI_GP:MCP9538853.1;Name=MCP9538853.1;end_range=888,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017416.2;locus_tag=NND05_15220;partial=true;product=transposase;protein_id=MCP9538853.1;transl_table=11 ##sequence-region JANDXE010000078.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000078.1 Genbank region 1 762 . + . ID=JANDXE010000078.1:1..762;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000078.1 Genbank gene 1 323 . - . ID=gene-NND05_15225;Name=NND05_15225;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15225;partial=true;start_range=.,1 JANDXE010000078.1 cmsearch rRNA 1 323 . - . ID=rna-NND05_15225;Parent=gene-NND05_15225;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15225;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000078.1 cmsearch exon 1 323 . - . ID=exon-NND05_15225-1;Parent=rna-NND05_15225;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15225;partial=true;product=23S ribosomal RNA;start_range=.,1 JANDXE010000078.1 Genbank gene 680 762 . - . ID=gene-NND05_15230;Name=NND05_15230;end_range=762,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=NND05_15230;partial=true JANDXE010000078.1 cmsearch rRNA 680 762 . - . ID=rna-NND05_15230;Parent=gene-NND05_15230;Dbxref=RFAM:RF00177;end_range=762,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15230;partial=true;product=16S ribosomal RNA JANDXE010000078.1 cmsearch exon 680 762 . - . ID=exon-NND05_15230-1;Parent=rna-NND05_15230;Dbxref=RFAM:RF00177;end_range=762,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_15230;partial=true;product=16S ribosomal RNA ##sequence-region JANDXE010000079.1 1 756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000079.1 Genbank region 1 756 . + . ID=JANDXE010000079.1:1..756;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000079.1 Genbank gene 1 597 . + . ID=gene-NND05_15235;Name=NND05_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15235;partial=true;start_range=.,1 JANDXE010000079.1 Protein Homology CDS 1 597 . + 0 ID=cds-MCP9538854.1;Parent=gene-NND05_15235;Dbxref=NCBI_GP:MCP9538854.1;Name=MCP9538854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018151.1;locus_tag=NND05_15235;partial=true;product=mobilization protein;protein_id=MCP9538854.1;start_range=.,1;transl_table=11 ##sequence-region JANDXE010000080.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000080.1 Genbank region 1 656 . + . ID=JANDXE010000080.1:1..656;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000080.1 Genbank gene 1 432 . - . ID=gene-NND05_15240;Name=NND05_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15240;partial=true;start_range=.,1 JANDXE010000080.1 GeneMarkS-2+ CDS 1 432 . - 0 ID=cds-MCP9538855.1;Parent=gene-NND05_15240;Dbxref=NCBI_GP:MCP9538855.1;Name=MCP9538855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_15240;partial=true;product=hypothetical protein;protein_id=MCP9538855.1;start_range=.,1;transl_table=11 ##sequence-region JANDXE010000081.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000081.1 Genbank region 1 598 . + . ID=JANDXE010000081.1:1..598;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000081.1 Genbank gene 15 598 . + . ID=gene-NND05_15245;Name=NND05_15245;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_15245;partial=true JANDXE010000081.1 Protein Homology CDS 15 598 . + 0 ID=cds-MCP9538856.1;Parent=gene-NND05_15245;Dbxref=NCBI_GP:MCP9538856.1;Name=MCP9538856.1;end_range=598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574869.1;locus_tag=NND05_15245;partial=true;product=hypothetical protein;protein_id=MCP9538856.1;transl_table=11 ##sequence-region JANDXE010000082.1 1 586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000082.1 Genbank region 1 586 . + . ID=JANDXE010000082.1:1..586;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 ##sequence-region JANDXE010000007.1 1 132251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000007.1 Genbank region 1 132251 . + . ID=JANDXE010000007.1:1..132251;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000007.1 Genbank gene 1 108 . - . ID=gene-NND05_05070;Name=NND05_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05070;partial=true;start_range=.,1 JANDXE010000007.1 Protein Homology CDS 1 108 . - 0 ID=cds-MCP9536929.1;Parent=gene-NND05_05070;Dbxref=NCBI_GP:MCP9536929.1;Name=MCP9536929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016662221.1;locus_tag=NND05_05070;partial=true;product=integrase;protein_id=MCP9536929.1;start_range=.,1;transl_table=11 JANDXE010000007.1 Genbank gene 701 1204 . + . ID=gene-NND05_05075;Name=NND05_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05075 JANDXE010000007.1 GeneMarkS-2+ CDS 701 1204 . + 0 ID=cds-MCP9536930.1;Parent=gene-NND05_05075;Dbxref=NCBI_GP:MCP9536930.1;Name=MCP9536930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05075;product=hypothetical protein;protein_id=MCP9536930.1;transl_table=11 JANDXE010000007.1 Genbank gene 1201 1539 . + . ID=gene-NND05_05080;Name=NND05_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05080 JANDXE010000007.1 Protein Homology CDS 1201 1539 . + 0 ID=cds-MCP9536931.1;Parent=gene-NND05_05080;Dbxref=NCBI_GP:MCP9536931.1;Name=MCP9536931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=NND05_05080;product=helix-turn-helix transcriptional regulator;protein_id=MCP9536931.1;transl_table=11 JANDXE010000007.1 Genbank gene 1685 4918 . - . ID=gene-NND05_05085;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NND05_05085 JANDXE010000007.1 Protein Homology CDS 1685 4918 . - 0 ID=cds-MCP9536932.1;Parent=gene-NND05_05085;Dbxref=NCBI_GP:MCP9536932.1;Name=MCP9536932.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967501.1;locus_tag=NND05_05085;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=MCP9536932.1;transl_table=11 JANDXE010000007.1 Genbank gene 4931 6007 . - . ID=gene-NND05_05090;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=NND05_05090 JANDXE010000007.1 Protein Homology CDS 4931 6007 . - 0 ID=cds-MCP9536933.1;Parent=gene-NND05_05090;Dbxref=NCBI_GP:MCP9536933.1;Name=MCP9536933.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372667.1;locus_tag=NND05_05090;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=MCP9536933.1;transl_table=11 JANDXE010000007.1 Genbank gene 6083 7966 . - . ID=gene-NND05_05095;Name=NND05_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05095 JANDXE010000007.1 Protein Homology CDS 6083 7966 . - 0 ID=cds-MCP9536934.1;Parent=gene-NND05_05095;Dbxref=NCBI_GP:MCP9536934.1;Name=MCP9536934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847423.1;locus_tag=NND05_05095;product=amidophosphoribosyltransferase;protein_id=MCP9536934.1;transl_table=11 JANDXE010000007.1 Genbank gene 8076 9980 . - . ID=gene-NND05_05100;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NND05_05100 JANDXE010000007.1 Protein Homology CDS 8076 9980 . - 0 ID=cds-MCP9536935.1;Parent=gene-NND05_05100;Dbxref=NCBI_GP:MCP9536935.1;Name=MCP9536935.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007368608.1;locus_tag=NND05_05100;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=MCP9536935.1;transl_table=11 JANDXE010000007.1 Genbank gene 10040 10837 . - . ID=gene-NND05_05105;Name=NND05_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05105 JANDXE010000007.1 Protein Homology CDS 10040 10837 . - 0 ID=cds-MCP9536936.1;Parent=gene-NND05_05105;Dbxref=NCBI_GP:MCP9536936.1;Name=MCP9536936.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847421.1;locus_tag=NND05_05105;product=polysaccharide biosynthesis/export family protein;protein_id=MCP9536936.1;transl_table=11 JANDXE010000007.1 Genbank gene 10958 12409 . - . ID=gene-NND05_05110;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=NND05_05110 JANDXE010000007.1 Protein Homology CDS 10958 12409 . - 0 ID=cds-MCP9536937.1;Parent=gene-NND05_05110;Dbxref=NCBI_GP:MCP9536937.1;Name=MCP9536937.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346690.1;locus_tag=NND05_05110;product=pyruvate kinase;protein_id=MCP9536937.1;transl_table=11 JANDXE010000007.1 Genbank gene 12637 13218 . - . ID=gene-NND05_05115;Name=NND05_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05115 JANDXE010000007.1 Protein Homology CDS 12637 13218 . - 0 ID=cds-MCP9536938.1;Parent=gene-NND05_05115;Dbxref=NCBI_GP:MCP9536938.1;Name=MCP9536938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336936.1;locus_tag=NND05_05115;product=LemA family protein;protein_id=MCP9536938.1;transl_table=11 JANDXE010000007.1 Genbank gene 13284 14117 . - . ID=gene-NND05_05120;Name=NND05_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05120 JANDXE010000007.1 Protein Homology CDS 13284 14117 . - 0 ID=cds-MCP9536939.1;Parent=gene-NND05_05120;Dbxref=NCBI_GP:MCP9536939.1;Name=MCP9536939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847417.1;locus_tag=NND05_05120;product=TPM domain-containing protein;protein_id=MCP9536939.1;transl_table=11 JANDXE010000007.1 Genbank gene 14286 14570 . + . ID=gene-NND05_05125;Name=NND05_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05125 JANDXE010000007.1 Protein Homology CDS 14286 14570 . + 0 ID=cds-MCP9536940.1;Parent=gene-NND05_05125;Dbxref=NCBI_GP:MCP9536940.1;Name=MCP9536940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009230287.1;locus_tag=NND05_05125;product=integration host factor subunit beta;protein_id=MCP9536940.1;transl_table=11 JANDXE010000007.1 Genbank gene 14839 16410 . + . ID=gene-NND05_05130;Name=NND05_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05130 JANDXE010000007.1 Protein Homology CDS 14839 16410 . + 0 ID=cds-MCP9536941.1;Parent=gene-NND05_05130;Dbxref=NCBI_GP:MCP9536941.1;Name=MCP9536941.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004376473.1;locus_tag=NND05_05130;product=Rne/Rng family ribonuclease;protein_id=MCP9536941.1;transl_table=11 JANDXE010000007.1 Genbank gene 16510 18597 . - . ID=gene-NND05_05135;Name=NND05_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05135 JANDXE010000007.1 Protein Homology CDS 16510 18597 . - 0 ID=cds-MCP9536942.1;Parent=gene-NND05_05135;Dbxref=NCBI_GP:MCP9536942.1;Name=MCP9536942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573627.1;locus_tag=NND05_05135;product=S9 family peptidase;protein_id=MCP9536942.1;transl_table=11 JANDXE010000007.1 Genbank gene 18729 19046 . + . ID=gene-NND05_05140;Name=NND05_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05140 JANDXE010000007.1 Protein Homology CDS 18729 19046 . + 0 ID=cds-MCP9536943.1;Parent=gene-NND05_05140;Dbxref=NCBI_GP:MCP9536943.1;Name=MCP9536943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412119.1;locus_tag=NND05_05140;product=heavy metal-binding domain-containing protein;protein_id=MCP9536943.1;transl_table=11 JANDXE010000007.1 Genbank gene 19198 20760 . - . ID=gene-NND05_05145;Name=NND05_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05145 JANDXE010000007.1 Protein Homology CDS 19198 20760 . - 0 ID=cds-MCP9536944.1;Parent=gene-NND05_05145;Dbxref=NCBI_GP:MCP9536944.1;Name=MCP9536944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847410.1;locus_tag=NND05_05145;product=ATP-binding protein;protein_id=MCP9536944.1;transl_table=11 JANDXE010000007.1 Genbank gene 21061 21396 . - . ID=gene-NND05_05150;Name=NND05_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05150 JANDXE010000007.1 GeneMarkS-2+ CDS 21061 21396 . - 0 ID=cds-MCP9536945.1;Parent=gene-NND05_05150;Dbxref=NCBI_GP:MCP9536945.1;Name=MCP9536945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05150;product=hypothetical protein;protein_id=MCP9536945.1;transl_table=11 JANDXE010000007.1 Genbank gene 21356 21667 . - . ID=gene-NND05_05155;Name=NND05_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05155 JANDXE010000007.1 Protein Homology CDS 21356 21667 . - 0 ID=cds-MCP9536946.1;Parent=gene-NND05_05155;Dbxref=NCBI_GP:MCP9536946.1;Name=MCP9536946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007833400.1;locus_tag=NND05_05155;product=helix-turn-helix domain-containing protein;protein_id=MCP9536946.1;transl_table=11 JANDXE010000007.1 Genbank gene 22721 24913 . - . ID=gene-NND05_05160;Name=NND05_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05160 JANDXE010000007.1 Protein Homology CDS 22721 24913 . - 0 ID=cds-MCP9536947.1;Parent=gene-NND05_05160;Dbxref=NCBI_GP:MCP9536947.1;Name=MCP9536947.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847402.1;locus_tag=NND05_05160;product=alpha-amylase family glycosyl hydrolase;protein_id=MCP9536947.1;transl_table=11 JANDXE010000007.1 Genbank gene 25005 25892 . - . ID=gene-NND05_05165;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NND05_05165 JANDXE010000007.1 Protein Homology CDS 25005 25892 . - 0 ID=cds-MCP9536948.1;Parent=gene-NND05_05165;Dbxref=NCBI_GP:MCP9536948.1;Name=MCP9536948.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847401.1;locus_tag=NND05_05165;product=ACP S-malonyltransferase;protein_id=MCP9536948.1;transl_table=11 JANDXE010000007.1 Genbank gene 26179 26697 . - . ID=gene-NND05_05170;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=NND05_05170 JANDXE010000007.1 Protein Homology CDS 26179 26697 . - 0 ID=cds-MCP9536949.1;Parent=gene-NND05_05170;Dbxref=NCBI_GP:MCP9536949.1;Name=MCP9536949.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342617.1;locus_tag=NND05_05170;product=50S ribosomal protein L9;protein_id=MCP9536949.1;transl_table=11 JANDXE010000007.1 Genbank gene 26717 26986 . - . ID=gene-NND05_05175;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NND05_05175 JANDXE010000007.1 Protein Homology CDS 26717 26986 . - 0 ID=cds-MCP9536950.1;Parent=gene-NND05_05175;Dbxref=NCBI_GP:MCP9536950.1;Name=MCP9536950.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008563797.1;locus_tag=NND05_05175;product=30S ribosomal protein S18;protein_id=MCP9536950.1;transl_table=11 JANDXE010000007.1 Genbank gene 26989 27333 . - . ID=gene-NND05_05180;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NND05_05180 JANDXE010000007.1 Protein Homology CDS 26989 27333 . - 0 ID=cds-MCP9536951.1;Parent=gene-NND05_05180;Dbxref=NCBI_GP:MCP9536951.1;Name=MCP9536951.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007133907.1;locus_tag=NND05_05180;product=30S ribosomal protein S6;protein_id=MCP9536951.1;transl_table=11 JANDXE010000007.1 Genbank gene 27508 27696 . + . ID=gene-NND05_05185;Name=NND05_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05185 JANDXE010000007.1 GeneMarkS-2+ CDS 27508 27696 . + 0 ID=cds-MCP9536952.1;Parent=gene-NND05_05185;Dbxref=NCBI_GP:MCP9536952.1;Name=MCP9536952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05185;product=hypothetical protein;protein_id=MCP9536952.1;transl_table=11 JANDXE010000007.1 Genbank gene 27851 28549 . - . ID=gene-NND05_05190;Name=NND05_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05190 JANDXE010000007.1 Protein Homology CDS 27851 28549 . - 0 ID=cds-MCP9536953.1;Parent=gene-NND05_05190;Dbxref=NCBI_GP:MCP9536953.1;Name=MCP9536953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966399.1;locus_tag=NND05_05190;product=response regulator transcription factor;protein_id=MCP9536953.1;transl_table=11 JANDXE010000007.1 Genbank gene 28595 30154 . - . ID=gene-NND05_05195;Name=NND05_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05195 JANDXE010000007.1 Protein Homology CDS 28595 30154 . - 0 ID=cds-MCP9536954.1;Parent=gene-NND05_05195;Dbxref=NCBI_GP:MCP9536954.1;Name=MCP9536954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007902823.1;locus_tag=NND05_05195;product=HAMP domain-containing histidine kinase;protein_id=MCP9536954.1;transl_table=11 JANDXE010000007.1 Genbank gene 30402 32564 . - . ID=gene-NND05_05200;Name=NND05_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05200 JANDXE010000007.1 Protein Homology CDS 30402 32564 . - 0 ID=cds-MCP9536955.1;Parent=gene-NND05_05200;Dbxref=NCBI_GP:MCP9536955.1;Name=MCP9536955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366840.1;locus_tag=NND05_05200;product=elongation factor G;protein_id=MCP9536955.1;transl_table=11 JANDXE010000007.1 Genbank gene 32829 34019 . + . ID=gene-NND05_05205;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=NND05_05205 JANDXE010000007.1 Protein Homology CDS 32829 34019 . + 0 ID=cds-MCP9536956.1;Parent=gene-NND05_05205;Dbxref=NCBI_GP:MCP9536956.1;Name=MCP9536956.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370167.1;locus_tag=NND05_05205;product=radical SAM family heme chaperone HemW;protein_id=MCP9536956.1;transl_table=11 JANDXE010000007.1 Genbank gene 34049 34411 . - . ID=gene-NND05_05210;Name=NND05_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05210 JANDXE010000007.1 GeneMarkS-2+ CDS 34049 34411 . - 0 ID=cds-MCP9536957.1;Parent=gene-NND05_05210;Dbxref=NCBI_GP:MCP9536957.1;Name=MCP9536957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05210;product=hypothetical protein;protein_id=MCP9536957.1;transl_table=11 JANDXE010000007.1 Genbank gene 34784 36130 . - . ID=gene-NND05_05215;Name=NND05_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05215 JANDXE010000007.1 Protein Homology CDS 34784 36130 . - 0 ID=cds-MCP9536958.1;Parent=gene-NND05_05215;Dbxref=NCBI_GP:MCP9536958.1;Name=MCP9536958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008566440.1;locus_tag=NND05_05215;product=citrate/2-methylcitrate synthase;protein_id=MCP9536958.1;transl_table=11 JANDXE010000007.1 Genbank gene 36136 38394 . - . ID=gene-NND05_05220;Name=NND05_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05220 JANDXE010000007.1 Protein Homology CDS 36136 38394 . - 0 ID=cds-MCP9536959.1;Parent=gene-NND05_05220;Dbxref=NCBI_GP:MCP9536959.1;Name=MCP9536959.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847389.1;locus_tag=NND05_05220;product=aconitate hydratase;protein_id=MCP9536959.1;transl_table=11 JANDXE010000007.1 Genbank gene 38754 39431 . + . ID=gene-NND05_05225;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NND05_05225 JANDXE010000007.1 Protein Homology CDS 38754 39431 . + 0 ID=cds-MCP9536960.1;Parent=gene-NND05_05225;Dbxref=NCBI_GP:MCP9536960.1;Name=MCP9536960.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899161.1;locus_tag=NND05_05225;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=MCP9536960.1;transl_table=11 JANDXE010000007.1 Genbank gene 39621 40463 . - . ID=gene-NND05_05230;Name=NND05_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05230 JANDXE010000007.1 Protein Homology CDS 39621 40463 . - 0 ID=cds-MCP9536961.1;Parent=gene-NND05_05230;Dbxref=NCBI_GP:MCP9536961.1;Name=MCP9536961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135938.1;locus_tag=NND05_05230;product=patatin family protein;protein_id=MCP9536961.1;transl_table=11 JANDXE010000007.1 Genbank gene 40721 42136 . + . ID=gene-NND05_05235;Name=NND05_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05235 JANDXE010000007.1 Protein Homology CDS 40721 42136 . + 0 ID=cds-MCP9536962.1;Parent=gene-NND05_05235;Dbxref=NCBI_GP:MCP9536962.1;Name=MCP9536962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004382681.1;locus_tag=NND05_05235;product=Xaa-Pro aminopeptidase;protein_id=MCP9536962.1;transl_table=11 JANDXE010000007.1 Genbank gene 42254 43465 . + . ID=gene-NND05_05240;Name=NND05_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05240 JANDXE010000007.1 Protein Homology CDS 42254 43465 . + 0 ID=cds-MCP9536963.1;Parent=gene-NND05_05240;Dbxref=NCBI_GP:MCP9536963.1;Name=MCP9536963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018909614.1;locus_tag=NND05_05240;product=C1 family peptidase;protein_id=MCP9536963.1;transl_table=11 JANDXE010000007.1 Genbank gene 43643 45361 . + . ID=gene-NND05_05245;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=NND05_05245 JANDXE010000007.1 Protein Homology CDS 43643 45361 . + 0 ID=cds-MCP9536964.1;Parent=gene-NND05_05245;Dbxref=NCBI_GP:MCP9536964.1;Name=MCP9536964.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847382.1;locus_tag=NND05_05245;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=MCP9536964.1;transl_table=11 JANDXE010000007.1 Genbank gene 45368 47170 . + . ID=gene-NND05_05250;Name=NND05_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05250 JANDXE010000007.1 Protein Homology CDS 45368 47170 . + 0 ID=cds-MCP9536965.1;Parent=gene-NND05_05250;Dbxref=NCBI_GP:MCP9536965.1;Name=MCP9536965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336154.1;locus_tag=NND05_05250;product=RecQ family ATP-dependent DNA helicase;protein_id=MCP9536965.1;transl_table=11 JANDXE010000007.1 Genbank gene 47302 48345 . - . ID=gene-NND05_05255;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=NND05_05255 JANDXE010000007.1 Protein Homology CDS 47302 48345 . - 0 ID=cds-MCP9536966.1;Parent=gene-NND05_05255;Dbxref=NCBI_GP:MCP9536966.1;Name=MCP9536966.1;Ontology_term=GO:0009097,GO:0009099,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008822680.1;locus_tag=NND05_05255;product=ketol-acid reductoisomerase;protein_id=MCP9536966.1;transl_table=11 JANDXE010000007.1 Genbank gene 48544 49386 . - . ID=gene-NND05_05260;Name=NND05_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05260 JANDXE010000007.1 Protein Homology CDS 48544 49386 . - 0 ID=cds-MCP9536967.1;Parent=gene-NND05_05260;Dbxref=NCBI_GP:MCP9536967.1;Name=MCP9536967.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847379.1;locus_tag=NND05_05260;product=thioesterase;protein_id=MCP9536967.1;transl_table=11 JANDXE010000007.1 Genbank gene 49580 50125 . - . ID=gene-NND05_05265;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=NND05_05265 JANDXE010000007.1 Protein Homology CDS 49580 50125 . - 0 ID=cds-MCP9536968.1;Parent=gene-NND05_05265;Dbxref=NCBI_GP:MCP9536968.1;Name=MCP9536968.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847378.1;locus_tag=NND05_05265;product=acetolactate synthase small subunit;protein_id=MCP9536968.1;transl_table=11 JANDXE010000007.1 Genbank gene 50185 51900 . - . ID=gene-NND05_05270;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=NND05_05270 JANDXE010000007.1 Protein Homology CDS 50185 51900 . - 0 ID=cds-MCP9536969.1;Parent=gene-NND05_05270;Dbxref=NCBI_GP:MCP9536969.1;Name=MCP9536969.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378272.1;locus_tag=NND05_05270;product=biosynthetic-type acetolactate synthase large subunit;protein_id=MCP9536969.1;transl_table=11 JANDXE010000007.1 Genbank gene 51989 53791 . - . ID=gene-NND05_05275;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NND05_05275 JANDXE010000007.1 Protein Homology CDS 51989 53791 . - 0 ID=cds-MCP9536970.1;Parent=gene-NND05_05275;Dbxref=NCBI_GP:MCP9536970.1;Name=MCP9536970.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064029.1;locus_tag=NND05_05275;product=dihydroxy-acid dehydratase;protein_id=MCP9536970.1;transl_table=11 JANDXE010000007.1 Genbank gene 54044 56725 . - . ID=gene-NND05_05280;Name=NND05_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05280 JANDXE010000007.1 Protein Homology CDS 54044 56725 . - 0 ID=cds-MCP9536971.1;Parent=gene-NND05_05280;Dbxref=NCBI_GP:MCP9536971.1;Name=MCP9536971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847374.1;locus_tag=NND05_05280;product=alpha-N-arabinofuranosidase;protein_id=MCP9536971.1;transl_table=11 JANDXE010000007.1 Genbank gene 56902 57780 . - . ID=gene-NND05_05285;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NND05_05285 JANDXE010000007.1 Protein Homology CDS 56902 57780 . - 0 ID=cds-MCP9536972.1;Parent=gene-NND05_05285;Dbxref=NCBI_GP:MCP9536972.1;Name=MCP9536972.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378767.1;locus_tag=NND05_05285;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=MCP9536972.1;transl_table=11 JANDXE010000007.1 Genbank gene 57846 59198 . - . ID=gene-NND05_05290;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NND05_05290 JANDXE010000007.1 Protein Homology CDS 57846 59198 . - 0 ID=cds-MCP9536973.1;Parent=gene-NND05_05290;Dbxref=NCBI_GP:MCP9536973.1;Name=MCP9536973.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364443.1;locus_tag=NND05_05290;product=signal recognition particle protein;protein_id=MCP9536973.1;transl_table=11 JANDXE010000007.1 Genbank gene 59271 59936 . - . ID=gene-NND05_05295;Name=NND05_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05295 JANDXE010000007.1 GeneMarkS-2+ CDS 59271 59936 . - 0 ID=cds-MCP9536974.1;Parent=gene-NND05_05295;Dbxref=NCBI_GP:MCP9536974.1;Name=MCP9536974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05295;product=hypothetical protein;protein_id=MCP9536974.1;transl_table=11 JANDXE010000007.1 Genbank gene 60031 61410 . - . ID=gene-NND05_05300;Name=NND05_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05300 JANDXE010000007.1 Protein Homology CDS 60031 61410 . - 0 ID=cds-MCP9536975.1;Parent=gene-NND05_05300;Dbxref=NCBI_GP:MCP9536975.1;Name=MCP9536975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847370.1;locus_tag=NND05_05300;product=NAD(P)-dependent oxidoreductase;protein_id=MCP9536975.1;transl_table=11 JANDXE010000007.1 Genbank gene 61444 62244 . - . ID=gene-NND05_05305;Name=NND05_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05305 JANDXE010000007.1 Protein Homology CDS 61444 62244 . - 0 ID=cds-MCP9536976.1;Parent=gene-NND05_05305;Dbxref=NCBI_GP:MCP9536976.1;Name=MCP9536976.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847369.1;locus_tag=NND05_05305;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=MCP9536976.1;transl_table=11 JANDXE010000007.1 Genbank gene 62310 63377 . - . ID=gene-NND05_05310;Name=NND05_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05310 JANDXE010000007.1 Protein Homology CDS 62310 63377 . - 0 ID=cds-MCP9536977.1;Parent=gene-NND05_05310;Dbxref=NCBI_GP:MCP9536977.1;Name=MCP9536977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337708.1;locus_tag=NND05_05310;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II;protein_id=MCP9536977.1;transl_table=11 JANDXE010000007.1 Genbank gene 63405 64574 . - . ID=gene-NND05_05315;Name=NND05_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05315 JANDXE010000007.1 Protein Homology CDS 63405 64574 . - 0 ID=cds-MCP9536978.1;Parent=gene-NND05_05315;Dbxref=NCBI_GP:MCP9536978.1;Name=MCP9536978.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847367.1;locus_tag=NND05_05315;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MCP9536978.1;transl_table=11 JANDXE010000007.1 Genbank gene 64603 65436 . - . ID=gene-NND05_05320;Name=NND05_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05320 JANDXE010000007.1 Protein Homology CDS 64603 65436 . - 0 ID=cds-MCP9536979.1;Parent=gene-NND05_05320;Dbxref=NCBI_GP:MCP9536979.1;Name=MCP9536979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411898.1;locus_tag=NND05_05320;product=prephenate dehydratase;protein_id=MCP9536979.1;transl_table=11 JANDXE010000007.1 Genbank gene 66020 66292 . - . ID=gene-NND05_05325;Name=NND05_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05325 JANDXE010000007.1 GeneMarkS-2+ CDS 66020 66292 . - 0 ID=cds-MCP9536980.1;Parent=gene-NND05_05325;Dbxref=NCBI_GP:MCP9536980.1;Name=MCP9536980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05325;product=hypothetical protein;protein_id=MCP9536980.1;transl_table=11 JANDXE010000007.1 Genbank gene 66351 67259 . - . ID=gene-NND05_05330;Name=NND05_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05330 JANDXE010000007.1 Protein Homology CDS 66351 67259 . - 0 ID=cds-MCP9536981.1;Parent=gene-NND05_05330;Dbxref=NCBI_GP:MCP9536981.1;Name=MCP9536981.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847363.1;locus_tag=NND05_05330;product=dihydroorotate dehydrogenase;protein_id=MCP9536981.1;transl_table=11 JANDXE010000007.1 Genbank gene 67315 68091 . - . ID=gene-NND05_05335;Name=NND05_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05335 JANDXE010000007.1 Protein Homology CDS 67315 68091 . - 0 ID=cds-MCP9536982.1;Parent=gene-NND05_05335;Dbxref=NCBI_GP:MCP9536982.1;Name=MCP9536982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340326.1;locus_tag=NND05_05335;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=MCP9536982.1;transl_table=11 JANDXE010000007.1 Genbank gene 68544 69131 . - . ID=gene-NND05_05340;Name=NND05_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05340 JANDXE010000007.1 Protein Homology CDS 68544 69131 . - 0 ID=cds-MCP9536983.1;Parent=gene-NND05_05340;Dbxref=NCBI_GP:MCP9536983.1;Name=MCP9536983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362565.1;locus_tag=NND05_05340;product=helix-turn-helix domain-containing protein;protein_id=MCP9536983.1;transl_table=11 JANDXE010000007.1 Genbank gene 70122 71150 . - . ID=gene-NND05_05345;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NND05_05345 JANDXE010000007.1 Protein Homology CDS 70122 71150 . - 0 ID=cds-MCP9536984.1;Parent=gene-NND05_05345;Dbxref=NCBI_GP:MCP9536984.1;Name=MCP9536984.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412481.1;locus_tag=NND05_05345;product=DNA polymerase III subunit delta;protein_id=MCP9536984.1;transl_table=11 JANDXE010000007.1 Genbank gene 71283 71741 . + . ID=gene-NND05_05350;Name=NND05_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05350 JANDXE010000007.1 Protein Homology CDS 71283 71741 . + 0 ID=cds-MCP9536985.1;Parent=gene-NND05_05350;Dbxref=NCBI_GP:MCP9536985.1;Name=MCP9536985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375565.1;locus_tag=NND05_05350;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=MCP9536985.1;transl_table=11 JANDXE010000007.1 Genbank gene 71991 73244 . + . ID=gene-NND05_05355;Name=NND05_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05355 JANDXE010000007.1 Protein Homology CDS 71991 73244 . + 0 ID=cds-MCP9536986.1;Parent=gene-NND05_05355;Dbxref=NCBI_GP:MCP9536986.1;Name=MCP9536986.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360181.1;locus_tag=NND05_05355;product=nucleotide sugar dehydrogenase;protein_id=MCP9536986.1;transl_table=11 JANDXE010000007.1 Genbank gene 73421 73888 . + . ID=gene-NND05_05360;Name=NND05_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05360 JANDXE010000007.1 Protein Homology CDS 73421 73888 . + 0 ID=cds-MCP9536987.1;Parent=gene-NND05_05360;Dbxref=NCBI_GP:MCP9536987.1;Name=MCP9536987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009161226.1;locus_tag=NND05_05360;product=MaoC family dehydratase;protein_id=MCP9536987.1;transl_table=11 JANDXE010000007.1 Genbank gene 74010 74885 . + . ID=gene-NND05_05365;Name=NND05_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05365 JANDXE010000007.1 Protein Homology CDS 74010 74885 . + 0 ID=cds-MCP9536988.1;Parent=gene-NND05_05365;Dbxref=NCBI_GP:MCP9536988.1;Name=MCP9536988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345608.1;locus_tag=NND05_05365;product=DnaJ domain-containing protein;protein_id=MCP9536988.1;transl_table=11 JANDXE010000007.1 Genbank gene 75018 75113 . - . ID=gene-NND05_05370;Name=NND05_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05370 JANDXE010000007.1 Protein Homology CDS 75018 75113 . - 0 ID=cds-MCP9536989.1;Parent=gene-NND05_05370;Dbxref=NCBI_GP:MCP9536989.1;Name=MCP9536989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040440.1;locus_tag=NND05_05370;product=smalltalk protein;protein_id=MCP9536989.1;transl_table=11 JANDXE010000007.1 Genbank gene 75231 75815 . - . ID=gene-NND05_05375;Name=NND05_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05375 JANDXE010000007.1 Protein Homology CDS 75231 75815 . - 0 ID=cds-MCP9536990.1;Parent=gene-NND05_05375;Dbxref=NCBI_GP:MCP9536990.1;Name=MCP9536990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847339.1;locus_tag=NND05_05375;product=DNA-binding protein;protein_id=MCP9536990.1;transl_table=11 JANDXE010000007.1 Genbank gene 76786 77244 . + . ID=gene-NND05_05380;Name=NND05_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05380 JANDXE010000007.1 Protein Homology CDS 76786 77244 . + 0 ID=cds-MCP9536991.1;Parent=gene-NND05_05380;Dbxref=NCBI_GP:MCP9536991.1;Name=MCP9536991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223843.1;locus_tag=NND05_05380;product=transposase;protein_id=MCP9536991.1;transl_table=11 JANDXE010000007.1 Genbank gene 77570 77995 . + . ID=gene-NND05_05385;Name=NND05_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05385 JANDXE010000007.1 GeneMarkS-2+ CDS 77570 77995 . + 0 ID=cds-MCP9536992.1;Parent=gene-NND05_05385;Dbxref=NCBI_GP:MCP9536992.1;Name=MCP9536992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05385;product=hypothetical protein;protein_id=MCP9536992.1;transl_table=11 JANDXE010000007.1 Genbank gene 78359 78850 . + . ID=gene-NND05_05390;Name=NND05_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05390 JANDXE010000007.1 GeneMarkS-2+ CDS 78359 78850 . + 0 ID=cds-MCP9536993.1;Parent=gene-NND05_05390;Dbxref=NCBI_GP:MCP9536993.1;Name=MCP9536993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05390;product=hypothetical protein;protein_id=MCP9536993.1;transl_table=11 JANDXE010000007.1 Genbank gene 79065 79583 . + . ID=gene-NND05_05395;Name=NND05_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05395 JANDXE010000007.1 GeneMarkS-2+ CDS 79065 79583 . + 0 ID=cds-MCP9536994.1;Parent=gene-NND05_05395;Dbxref=NCBI_GP:MCP9536994.1;Name=MCP9536994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05395;product=hypothetical protein;protein_id=MCP9536994.1;transl_table=11 JANDXE010000007.1 Genbank gene 79937 80371 . + . ID=gene-NND05_05400;Name=NND05_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05400 JANDXE010000007.1 Protein Homology CDS 79937 80371 . + 0 ID=cds-MCP9536995.1;Parent=gene-NND05_05400;Dbxref=NCBI_GP:MCP9536995.1;Name=MCP9536995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846451.1;locus_tag=NND05_05400;product=hypothetical protein;protein_id=MCP9536995.1;transl_table=11 JANDXE010000007.1 Genbank gene 80353 82845 . + . ID=gene-NND05_05405;Name=NND05_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05405 JANDXE010000007.1 Protein Homology CDS 80353 82845 . + 0 ID=cds-MCP9536996.1;Parent=gene-NND05_05405;Dbxref=NCBI_GP:MCP9536996.1;Name=MCP9536996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849107.1;locus_tag=NND05_05405;product=hypothetical protein;protein_id=MCP9536996.1;transl_table=11 JANDXE010000007.1 Genbank gene 82911 83471 . + . ID=gene-NND05_05410;Name=NND05_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05410 JANDXE010000007.1 Protein Homology CDS 82911 83471 . + 0 ID=cds-MCP9536997.1;Parent=gene-NND05_05410;Dbxref=NCBI_GP:MCP9536997.1;Name=MCP9536997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848882.1;locus_tag=NND05_05410;product=DUF5675 family protein;protein_id=MCP9536997.1;transl_table=11 JANDXE010000007.1 Genbank gene 83593 84420 . - . ID=gene-NND05_05415;Name=NND05_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05415 JANDXE010000007.1 Protein Homology CDS 83593 84420 . - 0 ID=cds-MCP9536998.1;Parent=gene-NND05_05415;Dbxref=NCBI_GP:MCP9536998.1;Name=MCP9536998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847351.1;locus_tag=NND05_05415;product=C4-type zinc ribbon domain-containing protein;protein_id=MCP9536998.1;transl_table=11 JANDXE010000007.1 Genbank gene 84458 85315 . - . ID=gene-NND05_05420;Name=NND05_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05420 JANDXE010000007.1 Protein Homology CDS 84458 85315 . - 0 ID=cds-MCP9536999.1;Parent=gene-NND05_05420;Dbxref=NCBI_GP:MCP9536999.1;Name=MCP9536999.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375580.1;locus_tag=NND05_05420;product=Nif3-like dinuclear metal center hexameric protein;protein_id=MCP9536999.1;transl_table=11 JANDXE010000007.1 Genbank gene 85471 86577 . + . ID=gene-NND05_05425;Name=NND05_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05425 JANDXE010000007.1 Protein Homology CDS 85471 86577 . + 0 ID=cds-MCP9537000.1;Parent=gene-NND05_05425;Dbxref=NCBI_GP:MCP9537000.1;Name=MCP9537000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847349.1;locus_tag=NND05_05425;product=agmatine deiminase family protein;protein_id=MCP9537000.1;transl_table=11 JANDXE010000007.1 Genbank gene 86944 87819 . + . ID=gene-NND05_05430;Name=NND05_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05430 JANDXE010000007.1 Protein Homology CDS 86944 87819 . + 0 ID=cds-MCP9537001.1;Parent=gene-NND05_05430;Dbxref=NCBI_GP:MCP9537001.1;Name=MCP9537001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847348.1;locus_tag=NND05_05430;product=carbon-nitrogen hydrolase;protein_id=MCP9537001.1;transl_table=11 JANDXE010000007.1 Genbank gene 87846 88754 . + . ID=gene-NND05_05435;Name=NND05_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05435 JANDXE010000007.1 Protein Homology CDS 87846 88754 . + 0 ID=cds-MCP9537002.1;Parent=gene-NND05_05435;Dbxref=NCBI_GP:MCP9537002.1;Name=MCP9537002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847346.1;locus_tag=NND05_05435;product=AEC family transporter;protein_id=MCP9537002.1;transl_table=11 JANDXE010000007.1 Genbank gene 88809 90593 . + . ID=gene-NND05_05440;Name=NND05_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05440 JANDXE010000007.1 GeneMarkS-2+ CDS 88809 90593 . + 0 ID=cds-MCP9537003.1;Parent=gene-NND05_05440;Dbxref=NCBI_GP:MCP9537003.1;Name=MCP9537003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05440;product=outer membrane beta-barrel family protein;protein_id=MCP9537003.1;transl_table=11 JANDXE010000007.1 Genbank gene 90964 92001 . - . ID=gene-NND05_05445;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=NND05_05445 JANDXE010000007.1 Protein Homology CDS 90964 92001 . - 0 ID=cds-MCP9537004.1;Parent=gene-NND05_05445;Dbxref=NCBI_GP:MCP9537004.1;Name=MCP9537004.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343186.1;locus_tag=NND05_05445;product=aspartate--ammonia ligase;protein_id=MCP9537004.1;transl_table=11 JANDXE010000007.1 Genbank gene 92300 92373 . + . ID=gene-NND05_05450;Name=NND05_05450;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_05450 JANDXE010000007.1 tRNAscan-SE tRNA 92300 92373 . + . ID=rna-NND05_05450;Parent=gene-NND05_05450;anticodon=(pos:92334..92336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_05450;product=tRNA-Arg JANDXE010000007.1 tRNAscan-SE exon 92300 92373 . + . ID=exon-NND05_05450-1;Parent=rna-NND05_05450;anticodon=(pos:92334..92336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_05450;product=tRNA-Arg JANDXE010000007.1 Genbank gene 92402 93625 . + . ID=gene-NND05_05455;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=NND05_05455 JANDXE010000007.1 Protein Homology CDS 92402 93625 . + 0 ID=cds-MCP9537005.1;Parent=gene-NND05_05455;Dbxref=NCBI_GP:MCP9537005.1;Name=MCP9537005.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346259.1;locus_tag=NND05_05455;product=peptidase T;protein_id=MCP9537005.1;transl_table=11 JANDXE010000007.1 Genbank gene 93718 95979 . + . ID=gene-NND05_05460;Name=NND05_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05460 JANDXE010000007.1 Protein Homology CDS 93718 95979 . + 0 ID=cds-MCP9537006.1;Parent=gene-NND05_05460;Dbxref=NCBI_GP:MCP9537006.1;Name=MCP9537006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897170.1;locus_tag=NND05_05460;product=cation:proton antiporter;protein_id=MCP9537006.1;transl_table=11 JANDXE010000007.1 Genbank gene 96065 96955 . - . ID=gene-NND05_05465;Name=NND05_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05465 JANDXE010000007.1 Protein Homology CDS 96065 96955 . - 0 ID=cds-MCP9537007.1;Parent=gene-NND05_05465;Dbxref=NCBI_GP:MCP9537007.1;Name=MCP9537007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412038.1;locus_tag=NND05_05465;product=DUF5715 family protein;protein_id=MCP9537007.1;transl_table=11 JANDXE010000007.1 Genbank gene 97091 98062 . + . ID=gene-NND05_05470;Name=NND05_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05470 JANDXE010000007.1 Protein Homology CDS 97091 98062 . + 0 ID=cds-MCP9537008.1;Parent=gene-NND05_05470;Dbxref=NCBI_GP:MCP9537008.1;Name=MCP9537008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847239.1;locus_tag=NND05_05470;product=PhoH family protein;protein_id=MCP9537008.1;transl_table=11 JANDXE010000007.1 Genbank gene 98079 99029 . + . ID=gene-NND05_05475;Name=NND05_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05475 JANDXE010000007.1 Protein Homology CDS 98079 99029 . + 0 ID=cds-MCP9537009.1;Parent=gene-NND05_05475;Dbxref=NCBI_GP:MCP9537009.1;Name=MCP9537009.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351458.1;locus_tag=NND05_05475;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MCP9537009.1;transl_table=11 JANDXE010000007.1 Genbank gene 99077 99811 . + . ID=gene-NND05_05480;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NND05_05480 JANDXE010000007.1 Protein Homology CDS 99077 99811 . + 0 ID=cds-MCP9537010.1;Parent=gene-NND05_05480;Dbxref=NCBI_GP:MCP9537010.1;Name=MCP9537010.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383531.1;locus_tag=NND05_05480;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=MCP9537010.1;transl_table=11 JANDXE010000007.1 Genbank gene 99824 100570 . + . ID=gene-NND05_05485;Name=NND05_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05485 JANDXE010000007.1 Protein Homology CDS 99824 100570 . + 0 ID=cds-MCP9537011.1;Parent=gene-NND05_05485;Dbxref=NCBI_GP:MCP9537011.1;Name=MCP9537011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359863.1;locus_tag=NND05_05485;product=shikimate dehydrogenase;protein_id=MCP9537011.1;transl_table=11 JANDXE010000007.1 Genbank gene 100630 101778 . + . ID=gene-NND05_05490;Name=NND05_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05490 JANDXE010000007.1 Protein Homology CDS 100630 101778 . + 0 ID=cds-MCP9537012.1;Parent=gene-NND05_05490;Dbxref=NCBI_GP:MCP9537012.1;Name=MCP9537012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435103.1;locus_tag=NND05_05490;product=AIR synthase-related protein;protein_id=MCP9537012.1;transl_table=11 JANDXE010000007.1 Genbank gene 101797 102906 . + . ID=gene-NND05_05495;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NND05_05495 JANDXE010000007.1 Protein Homology CDS 101797 102906 . + 0 ID=cds-MCP9537013.1;Parent=gene-NND05_05495;Dbxref=NCBI_GP:MCP9537013.1;Name=MCP9537013.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006847233.1;locus_tag=NND05_05495;product=peptide chain release factor 1;protein_id=MCP9537013.1;transl_table=11 JANDXE010000007.1 Genbank gene 103074 103919 . + . ID=gene-NND05_05500;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NND05_05500 JANDXE010000007.1 Protein Homology CDS 103074 103919 . + 0 ID=cds-MCP9537014.1;Parent=gene-NND05_05500;Dbxref=NCBI_GP:MCP9537014.1;Name=MCP9537014.1;Ontology_term=GO:0009220,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341877.1;locus_tag=NND05_05500;product=orotidine-5'-phosphate decarboxylase;protein_id=MCP9537014.1;transl_table=11 JANDXE010000007.1 Genbank gene 104248 105282 . + . ID=gene-NND05_05505;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NND05_05505 JANDXE010000007.1 Protein Homology CDS 104248 105282 . + 0 ID=cds-MCP9537015.1;Parent=gene-NND05_05505;Dbxref=NCBI_GP:MCP9537015.1;Name=MCP9537015.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383163.1;locus_tag=NND05_05505;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=MCP9537015.1;transl_table=11 JANDXE010000007.1 Genbank gene 105291 106679 . + . ID=gene-NND05_05510;Name=NND05_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05510 JANDXE010000007.1 Protein Homology CDS 105291 106679 . + 0 ID=cds-MCP9537016.1;Parent=gene-NND05_05510;Dbxref=NCBI_GP:MCP9537016.1;Name=MCP9537016.1;Ontology_term=GO:0006633,GO:0009245,GO:0008759,GO:0016836;gbkey=CDS;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA,hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911276.1;locus_tag=NND05_05510;product=bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase;protein_id=MCP9537016.1;transl_table=11 JANDXE010000007.1 Genbank gene 106695 107465 . + . ID=gene-NND05_05515;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NND05_05515 JANDXE010000007.1 Protein Homology CDS 106695 107465 . + 0 ID=cds-MCP9537017.1;Parent=gene-NND05_05515;Dbxref=NCBI_GP:MCP9537017.1;Name=MCP9537017.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341873.1;locus_tag=NND05_05515;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=MCP9537017.1;transl_table=11 JANDXE010000007.1 Genbank gene 107559 108470 . + . ID=gene-NND05_05520;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NND05_05520 JANDXE010000007.1 Protein Homology CDS 107559 108470 . + 0 ID=cds-MCP9537018.1;Parent=gene-NND05_05520;Dbxref=NCBI_GP:MCP9537018.1;Name=MCP9537018.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920201.1;locus_tag=NND05_05520;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MCP9537018.1;transl_table=11 JANDXE010000007.1 Genbank gene 108531 109205 . - . ID=gene-NND05_05525;Name=NND05_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05525 JANDXE010000007.1 Protein Homology CDS 108531 109205 . - 0 ID=cds-MCP9537019.1;Parent=gene-NND05_05525;Dbxref=NCBI_GP:MCP9537019.1;Name=MCP9537019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005675863.1;locus_tag=NND05_05525;product=ABC transporter ATP-binding protein;protein_id=MCP9537019.1;transl_table=11 JANDXE010000007.1 Genbank gene 109263 111659 . - . ID=gene-NND05_05530;Name=NND05_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05530 JANDXE010000007.1 Protein Homology CDS 109263 111659 . - 0 ID=cds-MCP9537020.1;Parent=gene-NND05_05530;Dbxref=NCBI_GP:MCP9537020.1;Name=MCP9537020.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.2;locus_tag=NND05_05530;product=FtsX-like permease family protein;protein_id=MCP9537020.1;transl_table=11 JANDXE010000007.1 Genbank gene 111749 112999 . - . ID=gene-NND05_05535;Name=NND05_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05535 JANDXE010000007.1 Protein Homology CDS 111749 112999 . - 0 ID=cds-MCP9537021.1;Parent=gene-NND05_05535;Dbxref=NCBI_GP:MCP9537021.1;Name=MCP9537021.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008022403.1;locus_tag=NND05_05535;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCP9537021.1;transl_table=11 JANDXE010000007.1 Genbank gene 113019 114479 . - . ID=gene-NND05_05540;Name=NND05_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05540 JANDXE010000007.1 Protein Homology CDS 113019 114479 . - 0 ID=cds-MCP9537022.1;Parent=gene-NND05_05540;Dbxref=NCBI_GP:MCP9537022.1;Name=MCP9537022.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018452811.1;locus_tag=NND05_05540;product=TolC family protein;protein_id=MCP9537022.1;transl_table=11 JANDXE010000007.1 Genbank gene 114647 115924 . - . ID=gene-NND05_05545;Name=NND05_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05545 JANDXE010000007.1 Protein Homology CDS 114647 115924 . - 0 ID=cds-MCP9537023.1;Parent=gene-NND05_05545;Dbxref=NCBI_GP:MCP9537023.1;Name=MCP9537023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NND05_05545;product=ATP-binding protein;protein_id=MCP9537023.1;transl_table=11 JANDXE010000007.1 Genbank gene 116064 117488 . - . ID=gene-NND05_05550;Name=NND05_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05550 JANDXE010000007.1 Protein Homology CDS 116064 117488 . - 0 ID=cds-MCP9537024.1;Parent=gene-NND05_05550;Dbxref=NCBI_GP:MCP9537024.1;Name=MCP9537024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292361.1;locus_tag=NND05_05550;product=sigma-54 dependent transcriptional regulator;protein_id=MCP9537024.1;transl_table=11 JANDXE010000007.1 Genbank gene 117701 118098 . + . ID=gene-NND05_05555;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NND05_05555 JANDXE010000007.1 cmsearch tmRNA 117701 118098 . + . ID=rna-NND05_05555;Parent=gene-NND05_05555;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_05555;product=transfer-messenger RNA JANDXE010000007.1 cmsearch exon 117701 118098 . + . ID=exon-NND05_05555-1;Parent=rna-NND05_05555;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NND05_05555;product=transfer-messenger RNA JANDXE010000007.1 Genbank gene 118700 119446 . + . ID=gene-NND05_05560;Name=NND05_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05560 JANDXE010000007.1 Protein Homology CDS 118700 119446 . + 0 ID=cds-MCP9537025.1;Parent=gene-NND05_05560;Dbxref=NCBI_GP:MCP9537025.1;Name=MCP9537025.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NND05_05560;product=restriction endonuclease subunit S;protein_id=MCP9537025.1;transl_table=11 JANDXE010000007.1 Genbank gene 119370 119954 . - . ID=gene-NND05_05565;Name=NND05_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05565 JANDXE010000007.1 Protein Homology CDS 119370 119954 . - 0 ID=cds-MCP9537026.1;Parent=gene-NND05_05565;Dbxref=NCBI_GP:MCP9537026.1;Name=MCP9537026.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NND05_05565;product=restriction endonuclease subunit S;protein_id=MCP9537026.1;transl_table=11 JANDXE010000007.1 Genbank gene 120004 121143 . - . ID=gene-NND05_05570;Name=NND05_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05570 JANDXE010000007.1 Protein Homology CDS 120004 121143 . - 0 ID=cds-MCP9537027.1;Parent=gene-NND05_05570;Dbxref=NCBI_GP:MCP9537027.1;Name=MCP9537027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018665856.1;locus_tag=NND05_05570;product=PDDEXK nuclease domain-containing protein;protein_id=MCP9537027.1;transl_table=11 JANDXE010000007.1 Genbank gene 121148 122806 . - . ID=gene-NND05_05575;Name=NND05_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05575 JANDXE010000007.1 Protein Homology CDS 121148 122806 . - 0 ID=cds-MCP9537028.1;Parent=gene-NND05_05575;Dbxref=NCBI_GP:MCP9537028.1;Name=MCP9537028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897199.1;locus_tag=NND05_05575;product=type I restriction-modification system subunit M;protein_id=MCP9537028.1;transl_table=11 JANDXE010000007.1 Genbank gene 122817 126074 . - . ID=gene-NND05_05580;Name=NND05_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05580 JANDXE010000007.1 Protein Homology CDS 122817 126074 . - 0 ID=cds-MCP9537029.1;Parent=gene-NND05_05580;Dbxref=NCBI_GP:MCP9537029.1;Name=MCP9537029.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005652536.1;locus_tag=NND05_05580;product=HsdR family type I site-specific deoxyribonuclease;protein_id=MCP9537029.1;transl_table=11 JANDXE010000007.1 Genbank gene 126760 127587 . - . ID=gene-NND05_05585;Name=NND05_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05585 JANDXE010000007.1 Protein Homology CDS 126760 127587 . - 0 ID=cds-MCP9537030.1;Parent=gene-NND05_05585;Dbxref=NCBI_GP:MCP9537030.1;Name=MCP9537030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NND05_05585;product=helix-turn-helix domain-containing protein;protein_id=MCP9537030.1;transl_table=11 JANDXE010000007.1 Genbank gene 127710 129404 . - . ID=gene-NND05_05590;Name=NND05_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05590 JANDXE010000007.1 Protein Homology CDS 127710 129404 . - 0 ID=cds-MCP9537031.1;Parent=gene-NND05_05590;Dbxref=NCBI_GP:MCP9537031.1;Name=MCP9537031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846925.1;locus_tag=NND05_05590;product=MFS transporter;protein_id=MCP9537031.1;transl_table=11 JANDXE010000007.1 Genbank gene 129427 130482 . - . ID=gene-NND05_05595;Name=NND05_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05595 JANDXE010000007.1 Protein Homology CDS 129427 130482 . - 0 ID=cds-MCP9537032.1;Parent=gene-NND05_05595;Dbxref=NCBI_GP:MCP9537032.1;Name=MCP9537032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009037809.1;locus_tag=NND05_05595;product=HlyD family secretion protein;protein_id=MCP9537032.1;transl_table=11 JANDXE010000007.1 Genbank gene 130636 131961 . - . ID=gene-NND05_05600;Name=NND05_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05600 JANDXE010000007.1 Protein Homology CDS 130636 131961 . - 0 ID=cds-MCP9537033.1;Parent=gene-NND05_05600;Dbxref=NCBI_GP:MCP9537033.1;Name=MCP9537033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007557871.1;locus_tag=NND05_05600;product=TolC family protein;protein_id=MCP9537033.1;transl_table=11 ##sequence-region JANDXE010000083.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000083.1 Genbank region 1 520 . + . ID=JANDXE010000083.1:1..520;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 ##sequence-region JANDXE010000008.1 1 130419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000008.1 Genbank region 1 130419 . + . ID=JANDXE010000008.1:1..130419;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000008.1 Genbank gene 418 1365 . - . ID=gene-NND05_05605;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=NND05_05605 JANDXE010000008.1 Protein Homology CDS 418 1365 . - 0 ID=cds-MCP9537034.1;Parent=gene-NND05_05605;Dbxref=NCBI_GP:MCP9537034.1;Name=MCP9537034.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011384.1;locus_tag=NND05_05605;product=cysteine synthase A;protein_id=MCP9537034.1;transl_table=11 JANDXE010000008.1 Genbank gene 1397 2692 . - . ID=gene-NND05_05610;Name=NND05_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05610 JANDXE010000008.1 Protein Homology CDS 1397 2692 . - 0 ID=cds-MCP9537035.1;Parent=gene-NND05_05610;Dbxref=NCBI_GP:MCP9537035.1;Name=MCP9537035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369691.1;locus_tag=NND05_05610;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=MCP9537035.1;transl_table=11 JANDXE010000008.1 Genbank gene 3348 4250 . - . ID=gene-NND05_05615;Name=NND05_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05615 JANDXE010000008.1 GeneMarkS-2+ CDS 3348 4250 . - 0 ID=cds-MCP9537036.1;Parent=gene-NND05_05615;Dbxref=NCBI_GP:MCP9537036.1;Name=MCP9537036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05615;product=hypothetical protein;protein_id=MCP9537036.1;transl_table=11 JANDXE010000008.1 Genbank gene 4314 4760 . - . ID=gene-NND05_05620;Name=NND05_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05620 JANDXE010000008.1 Protein Homology CDS 4314 4760 . - 0 ID=cds-MCP9537037.1;Parent=gene-NND05_05620;Dbxref=NCBI_GP:MCP9537037.1;Name=MCP9537037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849394.1;locus_tag=NND05_05620;product=DUF6108 family protein;protein_id=MCP9537037.1;transl_table=11 JANDXE010000008.1 Genbank gene 4827 4991 . - . ID=gene-NND05_05625;Name=NND05_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05625 JANDXE010000008.1 GeneMarkS-2+ CDS 4827 4991 . - 0 ID=cds-MCP9537038.1;Parent=gene-NND05_05625;Dbxref=NCBI_GP:MCP9537038.1;Name=MCP9537038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05625;product=hypothetical protein;protein_id=MCP9537038.1;transl_table=11 JANDXE010000008.1 Genbank gene 5272 6852 . + . ID=gene-NND05_05630;Name=NND05_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05630 JANDXE010000008.1 Protein Homology CDS 5272 6852 . + 0 ID=cds-MCP9537039.1;Parent=gene-NND05_05630;Dbxref=NCBI_GP:MCP9537039.1;Name=MCP9537039.1;Ontology_term=GO:0015718,GO:0008028,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849388.1;locus_tag=NND05_05630;product=lactate permease LctP family transporter;protein_id=MCP9537039.1;transl_table=11 JANDXE010000008.1 Genbank gene 6942 7886 . - . ID=gene-NND05_05635;Name=NND05_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05635 JANDXE010000008.1 Protein Homology CDS 6942 7886 . - 0 ID=cds-MCP9537040.1;Parent=gene-NND05_05635;Dbxref=NCBI_GP:MCP9537040.1;Name=MCP9537040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849387.1;locus_tag=NND05_05635;product=DMT family transporter;protein_id=MCP9537040.1;transl_table=11 JANDXE010000008.1 Genbank gene 8070 8885 . + . ID=gene-NND05_05640;Name=NND05_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05640 JANDXE010000008.1 Protein Homology CDS 8070 8885 . + 0 ID=cds-MCP9537041.1;Parent=gene-NND05_05640;Dbxref=NCBI_GP:MCP9537041.1;Name=MCP9537041.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849386.1;locus_tag=NND05_05640;product=AAA family ATPase;protein_id=MCP9537041.1;transl_table=11 JANDXE010000008.1 Genbank gene 8902 9906 . + . ID=gene-NND05_05645;Name=NND05_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05645 JANDXE010000008.1 Protein Homology CDS 8902 9906 . + 0 ID=cds-MCP9537042.1;Parent=gene-NND05_05645;Dbxref=NCBI_GP:MCP9537042.1;Name=MCP9537042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283041.1;locus_tag=NND05_05645;product=DUF4435 domain-containing protein;protein_id=MCP9537042.1;transl_table=11 JANDXE010000008.1 Genbank gene 9994 10956 . - . ID=gene-NND05_05650;Name=NND05_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05650 JANDXE010000008.1 Protein Homology CDS 9994 10956 . - 0 ID=cds-MCP9537043.1;Parent=gene-NND05_05650;Dbxref=NCBI_GP:MCP9537043.1;Name=MCP9537043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009163225.1;locus_tag=NND05_05650;product=class I mannose-6-phosphate isomerase;protein_id=MCP9537043.1;transl_table=11 JANDXE010000008.1 Genbank gene 11024 12481 . - . ID=gene-NND05_05655;Name=NND05_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05655 JANDXE010000008.1 Protein Homology CDS 11024 12481 . - 0 ID=cds-MCP9537044.1;Parent=gene-NND05_05655;Dbxref=NCBI_GP:MCP9537044.1;Name=MCP9537044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435156.1;locus_tag=NND05_05655;product=TrkH family potassium uptake protein;protein_id=MCP9537044.1;transl_table=11 JANDXE010000008.1 Genbank gene 12569 13912 . - . ID=gene-NND05_05660;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=NND05_05660 JANDXE010000008.1 Protein Homology CDS 12569 13912 . - 0 ID=cds-MCP9537045.1;Parent=gene-NND05_05660;Dbxref=NCBI_GP:MCP9537045.1;Name=MCP9537045.1;Ontology_term=GO:0006813,GO:0015079,GO:0005886;gbkey=CDS;gene=trkA;go_component=plasma membrane|0005886||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369704.1;locus_tag=NND05_05660;product=Trk system potassium transporter TrkA;protein_id=MCP9537045.1;transl_table=11 JANDXE010000008.1 Genbank gene 13940 15835 . - . ID=gene-NND05_05665;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=NND05_05665 JANDXE010000008.1 Protein Homology CDS 13940 15835 . - 0 ID=cds-MCP9537046.1;Parent=gene-NND05_05665;Dbxref=NCBI_GP:MCP9537046.1;Name=MCP9537046.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006283037.1;locus_tag=NND05_05665;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=MCP9537046.1;transl_table=11 JANDXE010000008.1 Genbank gene 16035 17441 . + . ID=gene-NND05_05670;Name=NND05_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05670 JANDXE010000008.1 Protein Homology CDS 16035 17441 . + 0 ID=cds-MCP9537047.1;Parent=gene-NND05_05670;Dbxref=NCBI_GP:MCP9537047.1;Name=MCP9537047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849381.1;locus_tag=NND05_05670;product=C1 family peptidase;protein_id=MCP9537047.1;transl_table=11 JANDXE010000008.1 Genbank gene 17455 18738 . + . ID=gene-NND05_05675;Name=NND05_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05675 JANDXE010000008.1 Protein Homology CDS 17455 18738 . + 0 ID=cds-MCP9537048.1;Parent=gene-NND05_05675;Dbxref=NCBI_GP:MCP9537048.1;Name=MCP9537048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849375.1;locus_tag=NND05_05675;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MCP9537048.1;transl_table=11 JANDXE010000008.1 Genbank gene 19077 22259 . + . ID=gene-NND05_05680;Name=NND05_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05680 JANDXE010000008.1 Protein Homology CDS 19077 22259 . + 0 ID=cds-MCP9537049.1;Parent=gene-NND05_05680;Dbxref=NCBI_GP:MCP9537049.1;Name=MCP9537049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005941519.1;locus_tag=NND05_05680;product=TonB-dependent receptor;protein_id=MCP9537049.1;transl_table=11 JANDXE010000008.1 Genbank gene 22273 24294 . + . ID=gene-NND05_05685;Name=NND05_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05685 JANDXE010000008.1 Protein Homology CDS 22273 24294 . + 0 ID=cds-MCP9537050.1;Parent=gene-NND05_05685;Dbxref=NCBI_GP:MCP9537050.1;Name=MCP9537050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008141166.1;locus_tag=NND05_05685;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537050.1;transl_table=11 JANDXE010000008.1 Genbank gene 24823 26076 . - . ID=gene-NND05_05690;Name=NND05_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05690 JANDXE010000008.1 Protein Homology CDS 24823 26076 . - 0 ID=cds-MCP9537051.1;Parent=gene-NND05_05690;Dbxref=NCBI_GP:MCP9537051.1;Name=MCP9537051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005832172.1;locus_tag=NND05_05690;product=ATP-binding protein;protein_id=MCP9537051.1;transl_table=11 JANDXE010000008.1 Genbank gene 26359 27258 . - . ID=gene-NND05_05695;Name=NND05_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05695 JANDXE010000008.1 Protein Homology CDS 26359 27258 . - 0 ID=cds-MCP9537052.1;Parent=gene-NND05_05695;Dbxref=NCBI_GP:MCP9537052.1;Name=MCP9537052.1;Ontology_term=GO:0009085,GO:0047850;gbkey=CDS;go_function=diaminopimelate dehydrogenase activity|0047850||IEA;go_process=lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340094.1;locus_tag=NND05_05695;product=diaminopimelate dehydrogenase;protein_id=MCP9537052.1;transl_table=11 JANDXE010000008.1 Genbank gene 28048 28662 . + . ID=gene-NND05_05700;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NND05_05700 JANDXE010000008.1 Protein Homology CDS 28048 28662 . + 0 ID=cds-MCP9537053.1;Parent=gene-NND05_05700;Dbxref=NCBI_GP:MCP9537053.1;Name=MCP9537053.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008563712.1;locus_tag=NND05_05700;product=Holliday junction branch migration protein RuvA;protein_id=MCP9537053.1;transl_table=11 JANDXE010000008.1 Genbank gene 28772 36313 . + . ID=gene-NND05_05705;Name=sprA;gbkey=Gene;gene=sprA;gene_biotype=protein_coding;locus_tag=NND05_05705 JANDXE010000008.1 Protein Homology CDS 28772 36313 . + 0 ID=cds-MCP9537054.1;Parent=gene-NND05_05705;Dbxref=NCBI_GP:MCP9537054.1;Name=MCP9537054.1;gbkey=CDS;gene=sprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411193.1;locus_tag=NND05_05705;product=cell surface protein SprA;protein_id=MCP9537054.1;transl_table=11 JANDXE010000008.1 Genbank gene 36390 37979 . - . ID=gene-NND05_05710;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=NND05_05710 JANDXE010000008.1 Protein Homology CDS 36390 37979 . - 0 ID=cds-MCP9537055.1;Parent=gene-NND05_05710;Dbxref=NCBI_GP:MCP9537055.1;Name=MCP9537055.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008618963.1;locus_tag=NND05_05710;product=L-aspartate oxidase;protein_id=MCP9537055.1;transl_table=11 JANDXE010000008.1 Genbank gene 38151 38558 . + . ID=gene-NND05_05715;Name=NND05_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05715 JANDXE010000008.1 Protein Homology CDS 38151 38558 . + 0 ID=cds-MCP9537056.1;Parent=gene-NND05_05715;Dbxref=NCBI_GP:MCP9537056.1;Name=MCP9537056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004349685.1;locus_tag=NND05_05715;product=PH domain-containing protein;protein_id=MCP9537056.1;transl_table=11 JANDXE010000008.1 Genbank gene 38555 39832 . + . ID=gene-NND05_05720;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=NND05_05720 JANDXE010000008.1 Protein Homology CDS 38555 39832 . + 0 ID=cds-MCP9537057.1;Parent=gene-NND05_05720;Dbxref=NCBI_GP:MCP9537057.1;Name=MCP9537057.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849369.1;locus_tag=NND05_05720;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=MCP9537057.1;transl_table=11 JANDXE010000008.1 Genbank gene 39848 41101 . + . ID=gene-NND05_05725;Name=NND05_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05725 JANDXE010000008.1 Protein Homology CDS 39848 41101 . + 0 ID=cds-MCP9537058.1;Parent=gene-NND05_05725;Dbxref=NCBI_GP:MCP9537058.1;Name=MCP9537058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849368.1;locus_tag=NND05_05725;product=mechanosensitive ion channel family protein;protein_id=MCP9537058.1;transl_table=11 JANDXE010000008.1 Genbank gene 41137 42177 . + . ID=gene-NND05_05730;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NND05_05730 JANDXE010000008.1 Protein Homology CDS 41137 42177 . + 0 ID=cds-MCP9537059.1;Parent=gene-NND05_05730;Dbxref=NCBI_GP:MCP9537059.1;Name=MCP9537059.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008122868.1;locus_tag=NND05_05730;product=A/G-specific adenine glycosylase;protein_id=MCP9537059.1;transl_table=11 JANDXE010000008.1 Genbank gene 42245 43033 . + . ID=gene-NND05_05735;Name=NND05_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05735 JANDXE010000008.1 Protein Homology CDS 42245 43033 . + 0 ID=cds-MCP9537060.1;Parent=gene-NND05_05735;Dbxref=NCBI_GP:MCP9537060.1;Name=MCP9537060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347144.1;locus_tag=NND05_05735;product=DNA/RNA non-specific endonuclease;protein_id=MCP9537060.1;transl_table=11 JANDXE010000008.1 Genbank gene 43217 43759 . - . ID=gene-NND05_05740;Name=NND05_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05740 JANDXE010000008.1 Protein Homology CDS 43217 43759 . - 0 ID=cds-MCP9537061.1;Parent=gene-NND05_05740;Dbxref=NCBI_GP:MCP9537061.1;Name=MCP9537061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1;locus_tag=NND05_05740;product=rubrerythrin family protein;protein_id=MCP9537061.1;transl_table=11 JANDXE010000008.1 Genbank gene 43853 45481 . - . ID=gene-NND05_05745;Name=NND05_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05745 JANDXE010000008.1 Protein Homology CDS 43853 45481 . - 0 ID=cds-MCP9537062.1;Parent=gene-NND05_05745;Dbxref=NCBI_GP:MCP9537062.1;Name=MCP9537062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849364.1;locus_tag=NND05_05745;product=Na+/H+ antiporter NhaC family protein;protein_id=MCP9537062.1;transl_table=11 JANDXE010000008.1 Genbank gene 45647 46753 . - . ID=gene-NND05_05750;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=NND05_05750 JANDXE010000008.1 Protein Homology CDS 45647 46753 . - 0 ID=cds-MCP9537063.1;Parent=gene-NND05_05750;Dbxref=NCBI_GP:MCP9537063.1;Name=MCP9537063.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848165.1;locus_tag=NND05_05750;product=alanine dehydrogenase;protein_id=MCP9537063.1;transl_table=11 JANDXE010000008.1 Genbank gene 46967 47674 . + . ID=gene-NND05_05755;Name=NND05_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05755 JANDXE010000008.1 Protein Homology CDS 46967 47674 . + 0 ID=cds-MCP9537064.1;Parent=gene-NND05_05755;Dbxref=NCBI_GP:MCP9537064.1;Name=MCP9537064.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342202.1;locus_tag=NND05_05755;product=SIMPL domain-containing protein;protein_id=MCP9537064.1;transl_table=11 JANDXE010000008.1 Genbank gene 47709 49109 . + . ID=gene-NND05_05760;Name=NND05_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05760 JANDXE010000008.1 Protein Homology CDS 47709 49109 . + 0 ID=cds-MCP9537065.1;Parent=gene-NND05_05760;Dbxref=NCBI_GP:MCP9537065.1;Name=MCP9537065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359393.1;locus_tag=NND05_05760;product=hypothetical protein;protein_id=MCP9537065.1;transl_table=11 JANDXE010000008.1 Genbank gene 49127 49669 . + . ID=gene-NND05_05765;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NND05_05765 JANDXE010000008.1 Protein Homology CDS 49127 49669 . + 0 ID=cds-MCP9537066.1;Parent=gene-NND05_05765;Dbxref=NCBI_GP:MCP9537066.1;Name=MCP9537066.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371609.1;locus_tag=NND05_05765;product=thioredoxin;protein_id=MCP9537066.1;transl_table=11 JANDXE010000008.1 Genbank gene 49818 51125 . + . ID=gene-NND05_05770;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NND05_05770 JANDXE010000008.1 Protein Homology CDS 49818 51125 . + 0 ID=cds-MCP9537067.1;Parent=gene-NND05_05770;Dbxref=NCBI_GP:MCP9537067.1;Name=MCP9537067.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435074.1;locus_tag=NND05_05770;product=phosphopyruvate hydratase;protein_id=MCP9537067.1;transl_table=11 JANDXE010000008.1 Genbank gene 51329 52075 . + . ID=gene-NND05_05775;Name=NND05_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05775 JANDXE010000008.1 Protein Homology CDS 51329 52075 . + 0 ID=cds-MCP9537068.1;Parent=gene-NND05_05775;Dbxref=NCBI_GP:MCP9537068.1;Name=MCP9537068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006281408.1;locus_tag=NND05_05775;product=ZIP family metal transporter;protein_id=MCP9537068.1;transl_table=11 JANDXE010000008.1 Genbank gene 52658 54223 . - . ID=gene-NND05_05780;Name=NND05_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05780 JANDXE010000008.1 Protein Homology CDS 52658 54223 . - 0 ID=cds-MCP9537069.1;Parent=gene-NND05_05780;Dbxref=NCBI_GP:MCP9537069.1;Name=MCP9537069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848530.1;locus_tag=NND05_05780;product=ATP-binding protein;protein_id=MCP9537069.1;transl_table=11 JANDXE010000008.1 Genbank gene 54490 56679 . - . ID=gene-NND05_05785;Name=NND05_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05785 JANDXE010000008.1 Protein Homology CDS 54490 56679 . - 0 ID=cds-MCP9537070.1;Parent=gene-NND05_05785;Dbxref=NCBI_GP:MCP9537070.1;Name=MCP9537070.1;Ontology_term=GO:0004356;gbkey=CDS;go_function=glutamate-ammonia ligase activity|0004356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341525.1;locus_tag=NND05_05785;product=glutamine synthetase III;protein_id=MCP9537070.1;transl_table=11 JANDXE010000008.1 Genbank gene 56735 57967 . - . ID=gene-NND05_05790;Name=NND05_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05790 JANDXE010000008.1 Protein Homology CDS 56735 57967 . - 0 ID=cds-MCP9537071.1;Parent=gene-NND05_05790;Dbxref=NCBI_GP:MCP9537071.1;Name=MCP9537071.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849500.1;locus_tag=NND05_05790;product=LL-diaminopimelate aminotransferase;protein_id=MCP9537071.1;transl_table=11 JANDXE010000008.1 Genbank gene 58030 58869 . - . ID=gene-NND05_05795;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NND05_05795 JANDXE010000008.1 Protein Homology CDS 58030 58869 . - 0 ID=cds-MCP9537072.1;Parent=gene-NND05_05795;Dbxref=NCBI_GP:MCP9537072.1;Name=MCP9537072.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008671398.1;locus_tag=NND05_05795;product=diaminopimelate epimerase;protein_id=MCP9537072.1;transl_table=11 JANDXE010000008.1 Genbank pseudogene 59189 59413 . + . ID=gene-NND05_05800;Name=NND05_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_05800;pseudo=true JANDXE010000008.1 Protein Homology CDS 59189 59413 . + 0 ID=cds-NND05_05800;Parent=gene-NND05_05800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007838317.1;locus_tag=NND05_05800;product=P-II family nitrogen regulator;pseudo=true;transl_table=11 JANDXE010000008.1 Genbank gene 59488 60579 . + . ID=gene-NND05_05805;Name=NND05_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05805 JANDXE010000008.1 Protein Homology CDS 59488 60579 . + 0 ID=cds-MCP9537073.1;Parent=gene-NND05_05805;Dbxref=NCBI_GP:MCP9537073.1;Name=MCP9537073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007570023.1;locus_tag=NND05_05805;product=ammonium transporter;protein_id=MCP9537073.1;transl_table=11 JANDXE010000008.1 Genbank gene 60910 61929 . + . ID=gene-NND05_05810;Name=NND05_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05810 JANDXE010000008.1 Protein Homology CDS 60910 61929 . + 0 ID=cds-MCP9537074.1;Parent=gene-NND05_05810;Dbxref=NCBI_GP:MCP9537074.1;Name=MCP9537074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.2;locus_tag=NND05_05810;product=XRE family transcriptional regulator;protein_id=MCP9537074.1;transl_table=11 JANDXE010000008.1 Genbank gene 61938 64121 . + . ID=gene-NND05_05815;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=NND05_05815 JANDXE010000008.1 Protein Homology CDS 61938 64121 . + 0 ID=cds-MCP9537075.1;Parent=gene-NND05_05815;Dbxref=NCBI_GP:MCP9537075.1;Name=MCP9537075.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005852924.1;locus_tag=NND05_05815;product=CRISPR-associated helicase Cas3';protein_id=MCP9537075.1;transl_table=11 JANDXE010000008.1 Genbank gene 64133 65005 . + . ID=gene-NND05_05820;Name=NND05_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05820 JANDXE010000008.1 Protein Homology CDS 64133 65005 . + 0 ID=cds-MCP9537076.1;Parent=gene-NND05_05820;Dbxref=NCBI_GP:MCP9537076.1;Name=MCP9537076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901047.1;locus_tag=NND05_05820;product=Bro-N domain-containing protein;protein_id=MCP9537076.1;transl_table=11 JANDXE010000008.1 Genbank gene 65013 65705 . + . ID=gene-NND05_05825;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=NND05_05825 JANDXE010000008.1 Protein Homology CDS 65013 65705 . + 0 ID=cds-MCP9537077.1;Parent=gene-NND05_05825;Dbxref=NCBI_GP:MCP9537077.1;Name=MCP9537077.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016271358.1;locus_tag=NND05_05825;product=type I-C CRISPR-associated protein Cas5c;protein_id=MCP9537077.1;transl_table=11 JANDXE010000008.1 Genbank gene 65702 67393 . + . ID=gene-NND05_05830;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=NND05_05830 JANDXE010000008.1 Protein Homology CDS 65702 67393 . + 0 ID=cds-MCP9537078.1;Parent=gene-NND05_05830;Dbxref=NCBI_GP:MCP9537078.1;Name=MCP9537078.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016271357.1;locus_tag=NND05_05830;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=MCP9537078.1;transl_table=11 JANDXE010000008.1 Genbank gene 67415 68308 . + . ID=gene-NND05_05835;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=NND05_05835 JANDXE010000008.1 Protein Homology CDS 67415 68308 . + 0 ID=cds-MCP9537079.1;Parent=gene-NND05_05835;Dbxref=NCBI_GP:MCP9537079.1;Name=MCP9537079.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275321.1;locus_tag=NND05_05835;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=MCP9537079.1;transl_table=11 JANDXE010000008.1 Genbank gene 68316 68987 . + . ID=gene-NND05_05840;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=NND05_05840 JANDXE010000008.1 Protein Homology CDS 68316 68987 . + 0 ID=cds-MCP9537080.1;Parent=gene-NND05_05840;Dbxref=NCBI_GP:MCP9537080.1;Name=MCP9537080.1;Ontology_term=GO:0043571,GO:0004518;gbkey=CDS;gene=cas4;go_function=nuclease activity|0004518||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007219523.1;locus_tag=NND05_05840;product=CRISPR-associated protein Cas4;protein_id=MCP9537080.1;transl_table=11 JANDXE010000008.1 Genbank gene 68971 69993 . + . ID=gene-NND05_05845;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=NND05_05845 JANDXE010000008.1 Protein Homology CDS 68971 69993 . + 0 ID=cds-MCP9537081.1;Parent=gene-NND05_05845;Dbxref=NCBI_GP:MCP9537081.1;Name=MCP9537081.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008655269.1;locus_tag=NND05_05845;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=MCP9537081.1;transl_table=11 JANDXE010000008.1 Genbank gene 69997 70287 . + . ID=gene-NND05_05850;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=NND05_05850 JANDXE010000008.1 Protein Homology CDS 69997 70287 . + 0 ID=cds-MCP9537082.1;Parent=gene-NND05_05850;Dbxref=NCBI_GP:MCP9537082.1;Name=MCP9537082.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009132547.1;locus_tag=NND05_05850;product=CRISPR-associated endonuclease Cas2;protein_id=MCP9537082.1;transl_table=11 JANDXE010000008.1 Genbank direct_repeat 70463 76168 . + . ID=id-JANDXE010000008.1:70463..76168;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=70463..70494;rpt_unit_seq=gtcacacccttcgtgggtgtgtggattgaaac JANDXE010000008.1 Genbank gene 77153 77830 . - . ID=gene-NND05_05855;Name=NND05_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05855 JANDXE010000008.1 Protein Homology CDS 77153 77830 . - 0 ID=cds-MCP9537083.1;Parent=gene-NND05_05855;Dbxref=NCBI_GP:MCP9537083.1;Name=MCP9537083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848162.1;locus_tag=NND05_05855;product=SGNH/GDSL hydrolase family protein;protein_id=MCP9537083.1;transl_table=11 JANDXE010000008.1 Genbank gene 78079 81948 . + . ID=gene-NND05_05860;Name=NND05_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05860 JANDXE010000008.1 Protein Homology CDS 78079 81948 . + 0 ID=cds-MCP9537084.1;Parent=gene-NND05_05860;Dbxref=NCBI_GP:MCP9537084.1;Name=MCP9537084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NND05_05860;product=ATP-binding protein;protein_id=MCP9537084.1;transl_table=11 JANDXE010000008.1 Genbank gene 82110 85196 . + . ID=gene-NND05_05865;Name=NND05_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05865 JANDXE010000008.1 Protein Homology CDS 82110 85196 . + 0 ID=cds-MCP9537085.1;Parent=gene-NND05_05865;Dbxref=NCBI_GP:MCP9537085.1;Name=MCP9537085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411452.1;locus_tag=NND05_05865;product=TonB-dependent receptor;protein_id=MCP9537085.1;transl_table=11 JANDXE010000008.1 Genbank gene 85229 86788 . + . ID=gene-NND05_05870;Name=NND05_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05870 JANDXE010000008.1 Protein Homology CDS 85229 86788 . + 0 ID=cds-MCP9537086.1;Parent=gene-NND05_05870;Dbxref=NCBI_GP:MCP9537086.1;Name=MCP9537086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411454.1;locus_tag=NND05_05870;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537086.1;transl_table=11 JANDXE010000008.1 Genbank gene 86869 89508 . + . ID=gene-NND05_05875;Name=NND05_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05875 JANDXE010000008.1 Protein Homology CDS 86869 89508 . + 0 ID=cds-MCP9537087.1;Parent=gene-NND05_05875;Dbxref=NCBI_GP:MCP9537087.1;Name=MCP9537087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930153.1;locus_tag=NND05_05875;product=glycoside hydrolase family 2 protein;protein_id=MCP9537087.1;transl_table=11 JANDXE010000008.1 Genbank gene 89986 90597 . + . ID=gene-NND05_05880;Name=NND05_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05880 JANDXE010000008.1 Protein Homology CDS 89986 90597 . + 0 ID=cds-MCP9537088.1;Parent=gene-NND05_05880;Dbxref=NCBI_GP:MCP9537088.1;Name=MCP9537088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848370.1;locus_tag=NND05_05880;product=HAD family phosphatase;protein_id=MCP9537088.1;transl_table=11 JANDXE010000008.1 Genbank gene 90647 91957 . - . ID=gene-NND05_05885;Name=NND05_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05885 JANDXE010000008.1 Protein Homology CDS 90647 91957 . - 0 ID=cds-MCP9537089.1;Parent=gene-NND05_05885;Dbxref=NCBI_GP:MCP9537089.1;Name=MCP9537089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848372.1;locus_tag=NND05_05885;product=ATP-binding protein;protein_id=MCP9537089.1;transl_table=11 JANDXE010000008.1 Genbank gene 92244 93383 . + . ID=gene-NND05_05890;Name=NND05_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05890 JANDXE010000008.1 Protein Homology CDS 92244 93383 . + 0 ID=cds-MCP9537090.1;Parent=gene-NND05_05890;Dbxref=NCBI_GP:MCP9537090.1;Name=MCP9537090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848371.1;locus_tag=NND05_05890;product=DUF418 domain-containing protein;protein_id=MCP9537090.1;transl_table=11 JANDXE010000008.1 Genbank gene 93530 95521 . - . ID=gene-NND05_05895;Name=NND05_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05895 JANDXE010000008.1 Protein Homology CDS 93530 95521 . - 0 ID=cds-MCP9537091.1;Parent=gene-NND05_05895;Dbxref=NCBI_GP:MCP9537091.1;Name=MCP9537091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368518.1;locus_tag=NND05_05895;product=glucosamine-6-phosphate deaminase;protein_id=MCP9537091.1;transl_table=11 JANDXE010000008.1 Genbank gene 95555 96346 . - . ID=gene-NND05_05900;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=NND05_05900 JANDXE010000008.1 Protein Homology CDS 95555 96346 . - 0 ID=cds-MCP9537092.1;Parent=gene-NND05_05900;Dbxref=NCBI_GP:MCP9537092.1;Name=MCP9537092.1;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009012159.1;locus_tag=NND05_05900;product=glucosamine-6-phosphate deaminase;protein_id=MCP9537092.1;transl_table=11 JANDXE010000008.1 Genbank gene 96406 97602 . - . ID=gene-NND05_05905;Name=NND05_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05905 JANDXE010000008.1 Protein Homology CDS 96406 97602 . - 0 ID=cds-MCP9537093.1;Parent=gene-NND05_05905;Dbxref=NCBI_GP:MCP9537093.1;Name=MCP9537093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004381022.1;locus_tag=NND05_05905;product=ROK family protein;protein_id=MCP9537093.1;transl_table=11 JANDXE010000008.1 Genbank gene 97958 99193 . + . ID=gene-NND05_05910;Name=NND05_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05910 JANDXE010000008.1 Protein Homology CDS 97958 99193 . + 0 ID=cds-MCP9537094.1;Parent=gene-NND05_05910;Dbxref=NCBI_GP:MCP9537094.1;Name=MCP9537094.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004292957.1;locus_tag=NND05_05910;product=MFS transporter;protein_id=MCP9537094.1;transl_table=11 JANDXE010000008.1 Genbank gene 99239 100156 . + . ID=gene-NND05_05915;Name=NND05_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05915 JANDXE010000008.1 Protein Homology CDS 99239 100156 . + 0 ID=cds-MCP9537095.1;Parent=gene-NND05_05915;Dbxref=NCBI_GP:MCP9537095.1;Name=MCP9537095.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009126756.1;locus_tag=NND05_05915;product=dihydrodipicolinate synthase family protein;protein_id=MCP9537095.1;transl_table=11 JANDXE010000008.1 Genbank gene 100193 101380 . + . ID=gene-NND05_05920;Name=NND05_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05920 JANDXE010000008.1 Protein Homology CDS 100193 101380 . + 0 ID=cds-MCP9537096.1;Parent=gene-NND05_05920;Dbxref=NCBI_GP:MCP9537096.1;Name=MCP9537096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369066.1;locus_tag=NND05_05920;product=AGE family epimerase/isomerase;protein_id=MCP9537096.1;transl_table=11 JANDXE010000008.1 Genbank gene 101401 102678 . + . ID=gene-NND05_05925;Name=NND05_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05925 JANDXE010000008.1 Protein Homology CDS 101401 102678 . + 0 ID=cds-MCP9537097.1;Parent=gene-NND05_05925;Dbxref=NCBI_GP:MCP9537097.1;Name=MCP9537097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024488.2;locus_tag=NND05_05925;product=glycoside hydrolase;protein_id=MCP9537097.1;transl_table=11 JANDXE010000008.1 Genbank gene 102710 103105 . + . ID=gene-NND05_05930;Name=NND05_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05930 JANDXE010000008.1 GeneMarkS-2+ CDS 102710 103105 . + 0 ID=cds-MCP9537098.1;Parent=gene-NND05_05930;Dbxref=NCBI_GP:MCP9537098.1;Name=MCP9537098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_05930;product=fibronectin type III domain-containing protein;protein_id=MCP9537098.1;transl_table=11 JANDXE010000008.1 Genbank gene 103145 106528 . + . ID=gene-NND05_05935;Name=NND05_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05935 JANDXE010000008.1 Protein Homology CDS 103145 106528 . + 0 ID=cds-MCP9537099.1;Parent=gene-NND05_05935;Dbxref=NCBI_GP:MCP9537099.1;Name=MCP9537099.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056.1;locus_tag=NND05_05935;product=TonB-dependent receptor;protein_id=MCP9537099.1;transl_table=11 JANDXE010000008.1 Genbank gene 106567 108369 . + . ID=gene-NND05_05940;Name=NND05_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05940 JANDXE010000008.1 Protein Homology CDS 106567 108369 . + 0 ID=cds-MCP9537100.1;Parent=gene-NND05_05940;Dbxref=NCBI_GP:MCP9537100.1;Name=MCP9537100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019592.2;locus_tag=NND05_05940;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=MCP9537100.1;transl_table=11 JANDXE010000008.1 Genbank pseudogene 108417 108653 . + . ID=gene-NND05_05945;Name=NND05_05945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_05945;pseudo=true JANDXE010000008.1 Protein Homology CDS 108417 108653 . + 0 ID=cds-NND05_05945;Parent=gene-NND05_05945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005795011.1;locus_tag=NND05_05945;product=RagB/SusD family nutrient uptake outer membrane protein;pseudo=true;transl_table=11 JANDXE010000008.1 Genbank gene 108852 110675 . + . ID=gene-NND05_05950;Name=NND05_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05950 JANDXE010000008.1 Protein Homology CDS 108852 110675 . + 0 ID=cds-MCP9537101.1;Parent=gene-NND05_05950;Dbxref=NCBI_GP:MCP9537101.1;Name=MCP9537101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013548312.1;locus_tag=NND05_05950;product=beta-N-acetylhexosaminidase;protein_id=MCP9537101.1;transl_table=11 JANDXE010000008.1 Genbank gene 110978 114133 . + . ID=gene-NND05_05955;Name=NND05_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05955 JANDXE010000008.1 Protein Homology CDS 110978 114133 . + 0 ID=cds-MCP9537102.1;Parent=gene-NND05_05955;Dbxref=NCBI_GP:MCP9537102.1;Name=MCP9537102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013548310.1;locus_tag=NND05_05955;product=cyclically-permuted mutarotase family protein;protein_id=MCP9537102.1;transl_table=11 JANDXE010000008.1 Genbank gene 114404 114760 . + . ID=gene-NND05_05960;Name=NND05_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05960 JANDXE010000008.1 Protein Homology CDS 114404 114760 . + 0 ID=cds-MCP9537103.1;Parent=gene-NND05_05960;Dbxref=NCBI_GP:MCP9537103.1;Name=MCP9537103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010538423.1;locus_tag=NND05_05960;product=P-II family nitrogen regulator;protein_id=MCP9537103.1;transl_table=11 JANDXE010000008.1 Genbank gene 114824 116086 . + . ID=gene-NND05_05965;Name=NND05_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05965 JANDXE010000008.1 Protein Homology CDS 114824 116086 . + 0 ID=cds-MCP9537104.1;Parent=gene-NND05_05965;Dbxref=NCBI_GP:MCP9537104.1;Name=MCP9537104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848365.1;locus_tag=NND05_05965;product=ammonium transporter;protein_id=MCP9537104.1;transl_table=11 JANDXE010000008.1 Genbank gene 116272 116991 . + . ID=gene-NND05_05970;Name=NND05_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05970 JANDXE010000008.1 Protein Homology CDS 116272 116991 . + 0 ID=cds-MCP9537105.1;Parent=gene-NND05_05970;Dbxref=NCBI_GP:MCP9537105.1;Name=MCP9537105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848364.1;locus_tag=NND05_05970;product=hypothetical protein;protein_id=MCP9537105.1;transl_table=11 JANDXE010000008.1 Genbank gene 117222 118706 . - . ID=gene-NND05_05975;Name=NND05_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05975 JANDXE010000008.1 Protein Homology CDS 117222 118706 . - 0 ID=cds-MCP9537106.1;Parent=gene-NND05_05975;Dbxref=NCBI_GP:MCP9537106.1;Name=MCP9537106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235434.1;locus_tag=NND05_05975;product=glycoside hydrolase family 125 protein;protein_id=MCP9537106.1;transl_table=11 JANDXE010000008.1 Genbank gene 118741 120918 . - . ID=gene-NND05_05980;Name=NND05_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05980 JANDXE010000008.1 Protein Homology CDS 118741 120918 . - 0 ID=cds-MCP9537107.1;Parent=gene-NND05_05980;Dbxref=NCBI_GP:MCP9537107.1;Name=MCP9537107.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008123606.1;locus_tag=NND05_05980;product=GH92 family glycosyl hydrolase;protein_id=MCP9537107.1;transl_table=11 JANDXE010000008.1 Genbank gene 121669 123456 . + . ID=gene-NND05_05985;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NND05_05985 JANDXE010000008.1 Protein Homology CDS 121669 123456 . + 0 ID=cds-MCP9537108.1;Parent=gene-NND05_05985;Dbxref=NCBI_GP:MCP9537108.1;Name=MCP9537108.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848363.1;locus_tag=NND05_05985;product=asparagine synthase B;protein_id=MCP9537108.1;transl_table=11 JANDXE010000008.1 Genbank gene 123805 128328 . + . ID=gene-NND05_05990;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=NND05_05990 JANDXE010000008.1 Protein Homology CDS 123805 128328 . + 0 ID=cds-MCP9537109.1;Parent=gene-NND05_05990;Dbxref=NCBI_GP:MCP9537109.1;Name=MCP9537109.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848362.1;locus_tag=NND05_05990;product=glutamate synthase large subunit;protein_id=MCP9537109.1;transl_table=11 JANDXE010000008.1 Genbank gene 128348 129691 . + . ID=gene-NND05_05995;Name=NND05_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_05995 JANDXE010000008.1 Protein Homology CDS 128348 129691 . + 0 ID=cds-MCP9537110.1;Parent=gene-NND05_05995;Dbxref=NCBI_GP:MCP9537110.1;Name=MCP9537110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005839626.1;locus_tag=NND05_05995;product=glutamate synthase subunit beta;protein_id=MCP9537110.1;transl_table=11 ##sequence-region JANDXE010000009.1 1 118259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=165179 JANDXE010000009.1 Genbank region 1 118259 . + . ID=JANDXE010000009.1:1..118259;Dbxref=taxon:165179;collection-date=2021;country=China: Beijing;gbkey=Src;isolation-source=feces;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Prevotella copri;strain=HF2128 JANDXE010000009.1 Genbank gene 414 2282 . - . ID=gene-NND05_06000;Name=NND05_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06000 JANDXE010000009.1 Protein Homology CDS 414 2282 . - 0 ID=cds-MCP9537111.1;Parent=gene-NND05_06000;Dbxref=NCBI_GP:MCP9537111.1;Name=MCP9537111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342058.1;locus_tag=NND05_06000;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=MCP9537111.1;transl_table=11 JANDXE010000009.1 Genbank gene 2336 2842 . - . ID=gene-NND05_06005;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=NND05_06005 JANDXE010000009.1 Protein Homology CDS 2336 2842 . - 0 ID=cds-MCP9537112.1;Parent=gene-NND05_06005;Dbxref=NCBI_GP:MCP9537112.1;Name=MCP9537112.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007412431.1;locus_tag=NND05_06005;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MCP9537112.1;transl_table=11 JANDXE010000009.1 Genbank gene 2925 3533 . - . ID=gene-NND05_06010;Name=NND05_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06010 JANDXE010000009.1 Protein Homology CDS 2925 3533 . - 0 ID=cds-MCP9537113.1;Parent=gene-NND05_06010;Dbxref=NCBI_GP:MCP9537113.1;Name=MCP9537113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967057.1;locus_tag=NND05_06010;product=phosphatase PAP2 family protein;protein_id=MCP9537113.1;transl_table=11 JANDXE010000009.1 Genbank gene 3530 5068 . - . ID=gene-NND05_06015;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=NND05_06015 JANDXE010000009.1 Protein Homology CDS 3530 5068 . - 0 ID=cds-MCP9537114.1;Parent=gene-NND05_06015;Dbxref=NCBI_GP:MCP9537114.1;Name=MCP9537114.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848252.1;locus_tag=NND05_06015;product=RNA polymerase factor sigma-54;protein_id=MCP9537114.1;transl_table=11 JANDXE010000009.1 Genbank gene 5164 5808 . - . ID=gene-NND05_06020;Name=NND05_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06020 JANDXE010000009.1 Protein Homology CDS 5164 5808 . - 0 ID=cds-MCP9537115.1;Parent=gene-NND05_06020;Dbxref=NCBI_GP:MCP9537115.1;Name=MCP9537115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342062.1;locus_tag=NND05_06020;product=hypothetical protein;protein_id=MCP9537115.1;transl_table=11 JANDXE010000009.1 Genbank gene 6547 7623 . - . ID=gene-NND05_06025;Name=NND05_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06025 JANDXE010000009.1 Protein Homology CDS 6547 7623 . - 0 ID=cds-MCP9537116.1;Parent=gene-NND05_06025;Dbxref=NCBI_GP:MCP9537116.1;Name=MCP9537116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848254.1;locus_tag=NND05_06025;product=cysteine protease;protein_id=MCP9537116.1;transl_table=11 JANDXE010000009.1 Genbank gene 7761 8618 . - . ID=gene-NND05_06030;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NND05_06030 JANDXE010000009.1 Protein Homology CDS 7761 8618 . - 0 ID=cds-MCP9537117.1;Parent=gene-NND05_06030;Dbxref=NCBI_GP:MCP9537117.1;Name=MCP9537117.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848894.1;locus_tag=NND05_06030;product=prolipoprotein diacylglyceryl transferase;protein_id=MCP9537117.1;transl_table=11 JANDXE010000009.1 Genbank gene 8627 9730 . - . ID=gene-NND05_06035;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NND05_06035 JANDXE010000009.1 Protein Homology CDS 8627 9730 . - 0 ID=cds-MCP9537118.1;Parent=gene-NND05_06035;Dbxref=NCBI_GP:MCP9537118.1;Name=MCP9537118.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007661265.1;locus_tag=NND05_06035;product=redox-regulated ATPase YchF;protein_id=MCP9537118.1;transl_table=11 JANDXE010000009.1 Genbank gene 10203 10580 . - . ID=gene-NND05_06040;Name=NND05_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06040 JANDXE010000009.1 Protein Homology CDS 10203 10580 . - 0 ID=cds-MCP9537119.1;Parent=gene-NND05_06040;Dbxref=NCBI_GP:MCP9537119.1;Name=MCP9537119.1;Ontology_term=GO:0019430,GO:0004784;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007573030.1;locus_tag=NND05_06040;product=desulfoferrodoxin;protein_id=MCP9537119.1;transl_table=11 JANDXE010000009.1 Genbank gene 10686 10850 . - . ID=gene-NND05_06045;Name=NND05_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06045 JANDXE010000009.1 Protein Homology CDS 10686 10850 . - 0 ID=cds-MCP9537120.1;Parent=gene-NND05_06045;Dbxref=NCBI_GP:MCP9537120.1;Name=MCP9537120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002587718.1;locus_tag=NND05_06045;product=rubredoxin;protein_id=MCP9537120.1;transl_table=11 JANDXE010000009.1 Genbank gene 11323 12597 . + . ID=gene-NND05_06050;Name=NND05_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06050 JANDXE010000009.1 Protein Homology CDS 11323 12597 . + 0 ID=cds-MCP9537121.1;Parent=gene-NND05_06050;Dbxref=NCBI_GP:MCP9537121.1;Name=MCP9537121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016662578.1;locus_tag=NND05_06050;product=alpha-L-fucosidase;protein_id=MCP9537121.1;transl_table=11 JANDXE010000009.1 Genbank gene 12749 13519 . - . ID=gene-NND05_06055;Name=NND05_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06055 JANDXE010000009.1 Protein Homology CDS 12749 13519 . - 0 ID=cds-MCP9537122.1;Parent=gene-NND05_06055;Dbxref=NCBI_GP:MCP9537122.1;Name=MCP9537122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013263950.1;locus_tag=NND05_06055;product=copper homeostasis protein CutC;protein_id=MCP9537122.1;transl_table=11 JANDXE010000009.1 Genbank gene 13732 16398 . + . ID=gene-NND05_06060;Name=NND05_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06060 JANDXE010000009.1 Protein Homology CDS 13732 16398 . + 0 ID=cds-MCP9537123.1;Parent=gene-NND05_06060;Dbxref=NCBI_GP:MCP9537123.1;Name=MCP9537123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370454.1;locus_tag=NND05_06060;product=transglutaminase-like domain-containing protein;protein_id=MCP9537123.1;transl_table=11 JANDXE010000009.1 Genbank gene 16519 17391 . - . ID=gene-NND05_06065;Name=NND05_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06065 JANDXE010000009.1 Protein Homology CDS 16519 17391 . - 0 ID=cds-MCP9537124.1;Parent=gene-NND05_06065;Dbxref=NCBI_GP:MCP9537124.1;Name=MCP9537124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007764278.1;locus_tag=NND05_06065;product=DUF4384 domain-containing protein;protein_id=MCP9537124.1;transl_table=11 JANDXE010000009.1 Genbank gene 17415 19961 . - . ID=gene-NND05_06070;Name=NND05_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06070 JANDXE010000009.1 Protein Homology CDS 17415 19961 . - 0 ID=cds-MCP9537125.1;Parent=gene-NND05_06070;Dbxref=NCBI_GP:MCP9537125.1;Name=MCP9537125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=NND05_06070;product=caspase family protein;protein_id=MCP9537125.1;transl_table=11 JANDXE010000009.1 Genbank gene 19979 22051 . - . ID=gene-NND05_06075;Name=NND05_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06075 JANDXE010000009.1 GeneMarkS-2+ CDS 19979 22051 . - 0 ID=cds-MCP9537126.1;Parent=gene-NND05_06075;Dbxref=NCBI_GP:MCP9537126.1;Name=MCP9537126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06075;product=WD40 repeat domain-containing protein;protein_id=MCP9537126.1;transl_table=11 JANDXE010000009.1 Genbank gene 22067 22753 . - . ID=gene-NND05_06080;Name=NND05_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06080 JANDXE010000009.1 Protein Homology CDS 22067 22753 . - 0 ID=cds-MCP9537127.1;Parent=gene-NND05_06080;Dbxref=NCBI_GP:MCP9537127.1;Name=MCP9537127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007563139.1;locus_tag=NND05_06080;product=hypothetical protein;protein_id=MCP9537127.1;transl_table=11 JANDXE010000009.1 Genbank gene 23086 25848 . - . ID=gene-NND05_06085;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=NND05_06085 JANDXE010000009.1 Protein Homology CDS 23086 25848 . - 0 ID=cds-MCP9537128.1;Parent=gene-NND05_06085;Dbxref=NCBI_GP:MCP9537128.1;Name=MCP9537128.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919696.1;locus_tag=NND05_06085;product=DNA polymerase I;protein_id=MCP9537128.1;transl_table=11 JANDXE010000009.1 Genbank gene 25935 26912 . + . ID=gene-NND05_06090;Name=NND05_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06090 JANDXE010000009.1 Protein Homology CDS 25935 26912 . + 0 ID=cds-MCP9537129.1;Parent=gene-NND05_06090;Dbxref=NCBI_GP:MCP9537129.1;Name=MCP9537129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919697.1;locus_tag=NND05_06090;product=polyprenyl synthetase family protein;protein_id=MCP9537129.1;transl_table=11 JANDXE010000009.1 Genbank gene 27048 27986 . - . ID=gene-NND05_06095;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=NND05_06095 JANDXE010000009.1 Protein Homology CDS 27048 27986 . - 0 ID=cds-MCP9537130.1;Parent=gene-NND05_06095;Dbxref=NCBI_GP:MCP9537130.1;Name=MCP9537130.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848908.1;locus_tag=NND05_06095;product=deoxyribose-phosphate aldolase;protein_id=MCP9537130.1;transl_table=11 JANDXE010000009.1 Genbank gene 28085 28435 . - . ID=gene-NND05_06100;Name=NND05_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06100 JANDXE010000009.1 Protein Homology CDS 28085 28435 . - 0 ID=cds-MCP9537131.1;Parent=gene-NND05_06100;Dbxref=NCBI_GP:MCP9537131.1;Name=MCP9537131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910864.1;locus_tag=NND05_06100;product=nucleotide pyrophosphohydrolase;protein_id=MCP9537131.1;transl_table=11 JANDXE010000009.1 Genbank gene 28440 28892 . - . ID=gene-NND05_06105;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=NND05_06105 JANDXE010000009.1 Protein Homology CDS 28440 28892 . - 0 ID=cds-MCP9537132.1;Parent=gene-NND05_06105;Dbxref=NCBI_GP:MCP9537132.1;Name=MCP9537132.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004358904.1;locus_tag=NND05_06105;product=D-aminoacyl-tRNA deacylase;protein_id=MCP9537132.1;transl_table=11 JANDXE010000009.1 Genbank gene 29012 30859 . - . ID=gene-NND05_06110;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NND05_06110 JANDXE010000009.1 Protein Homology CDS 29012 30859 . - 0 ID=cds-MCP9537133.1;Parent=gene-NND05_06110;Dbxref=NCBI_GP:MCP9537133.1;Name=MCP9537133.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848912.1;locus_tag=NND05_06110;product=excinuclease ABC subunit UvrC;protein_id=MCP9537133.1;transl_table=11 JANDXE010000009.1 Genbank gene 30974 31504 . - . ID=gene-NND05_06115;Name=NND05_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06115 JANDXE010000009.1 Protein Homology CDS 30974 31504 . - 0 ID=cds-MCP9537134.1;Parent=gene-NND05_06115;Dbxref=NCBI_GP:MCP9537134.1;Name=MCP9537134.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369169.1;locus_tag=NND05_06115;product=adenine phosphoribosyltransferase;protein_id=MCP9537134.1;transl_table=11 JANDXE010000009.1 Genbank gene 31778 33649 . - . ID=gene-NND05_06120;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NND05_06120 JANDXE010000009.1 Protein Homology CDS 31778 33649 . - 0 ID=cds-MCP9537135.1;Parent=gene-NND05_06120;Dbxref=NCBI_GP:MCP9537135.1;Name=MCP9537135.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919702.1;locus_tag=NND05_06120;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=MCP9537135.1;transl_table=11 JANDXE010000009.1 Genbank gene 33886 34569 . + . ID=gene-NND05_06125;Name=NND05_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06125 JANDXE010000009.1 Protein Homology CDS 33886 34569 . + 0 ID=cds-MCP9537136.1;Parent=gene-NND05_06125;Dbxref=NCBI_GP:MCP9537136.1;Name=MCP9537136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369175.1;locus_tag=NND05_06125;product=succinate dehydrogenase/fumarate reductase cytochrome b subunit;protein_id=MCP9537136.1;transl_table=11 JANDXE010000009.1 Genbank gene 34602 36584 . + . ID=gene-NND05_06130;Name=NND05_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06130 JANDXE010000009.1 Protein Homology CDS 34602 36584 . + 0 ID=cds-MCP9537137.1;Parent=gene-NND05_06130;Dbxref=NCBI_GP:MCP9537137.1;Name=MCP9537137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380526.1;locus_tag=NND05_06130;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=MCP9537137.1;transl_table=11 JANDXE010000009.1 Genbank gene 36600 37358 . + . ID=gene-NND05_06135;Name=NND05_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06135 JANDXE010000009.1 Protein Homology CDS 36600 37358 . + 0 ID=cds-MCP9537138.1;Parent=gene-NND05_06135;Dbxref=NCBI_GP:MCP9537138.1;Name=MCP9537138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435456.1;locus_tag=NND05_06135;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=MCP9537138.1;transl_table=11 JANDXE010000009.1 Genbank gene 37914 39230 . + . ID=gene-NND05_06140;Name=NND05_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06140 JANDXE010000009.1 Protein Homology CDS 37914 39230 . + 0 ID=cds-MCP9537139.1;Parent=gene-NND05_06140;Dbxref=NCBI_GP:MCP9537139.1;Name=MCP9537139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369194.1;locus_tag=NND05_06140;product=class I SAM-dependent methyltransferase;protein_id=MCP9537139.1;transl_table=11 JANDXE010000009.1 Genbank gene 39353 40306 . + . ID=gene-NND05_06145;Name=NND05_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06145 JANDXE010000009.1 Protein Homology CDS 39353 40306 . + 0 ID=cds-MCP9537140.1;Parent=gene-NND05_06145;Dbxref=NCBI_GP:MCP9537140.1;Name=MCP9537140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899410.1;locus_tag=NND05_06145;product=ORF6N domain-containing protein;protein_id=MCP9537140.1;transl_table=11 JANDXE010000009.1 Genbank gene 40917 41753 . + . ID=gene-NND05_06150;Name=NND05_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06150 JANDXE010000009.1 GeneMarkS-2+ CDS 40917 41753 . + 0 ID=cds-MCP9537141.1;Parent=gene-NND05_06150;Dbxref=NCBI_GP:MCP9537141.1;Name=MCP9537141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06150;product=hypothetical protein;protein_id=MCP9537141.1;transl_table=11 JANDXE010000009.1 Genbank gene 41766 42485 . + . ID=gene-NND05_06155;Name=NND05_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06155 JANDXE010000009.1 GeneMarkS-2+ CDS 41766 42485 . + 0 ID=cds-MCP9537142.1;Parent=gene-NND05_06155;Dbxref=NCBI_GP:MCP9537142.1;Name=MCP9537142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06155;product=hypothetical protein;protein_id=MCP9537142.1;transl_table=11 JANDXE010000009.1 Genbank gene 42759 43112 . + . ID=gene-NND05_06160;Name=NND05_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06160 JANDXE010000009.1 GeneMarkS-2+ CDS 42759 43112 . + 0 ID=cds-MCP9537143.1;Parent=gene-NND05_06160;Dbxref=NCBI_GP:MCP9537143.1;Name=MCP9537143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06160;product=hypothetical protein;protein_id=MCP9537143.1;transl_table=11 JANDXE010000009.1 Genbank gene 43396 43908 . + . ID=gene-NND05_06165;Name=NND05_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06165 JANDXE010000009.1 Protein Homology CDS 43396 43908 . + 0 ID=cds-MCP9537144.1;Parent=gene-NND05_06165;Dbxref=NCBI_GP:MCP9537144.1;Name=MCP9537144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009130115.1;locus_tag=NND05_06165;product=ORF6N domain-containing protein;protein_id=MCP9537144.1;transl_table=11 JANDXE010000009.1 Genbank gene 43857 45398 . - . ID=gene-NND05_06170;Name=NND05_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06170 JANDXE010000009.1 Protein Homology CDS 43857 45398 . - 0 ID=cds-MCP9537145.1;Parent=gene-NND05_06170;Dbxref=NCBI_GP:MCP9537145.1;Name=MCP9537145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846712.1;locus_tag=NND05_06170;product=carboxylesterase family protein;protein_id=MCP9537145.1;transl_table=11 JANDXE010000009.1 Genbank gene 46053 47204 . + . ID=gene-NND05_06175;Name=NND05_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06175 JANDXE010000009.1 Protein Homology CDS 46053 47204 . + 0 ID=cds-MCP9537146.1;Parent=gene-NND05_06175;Dbxref=NCBI_GP:MCP9537146.1;Name=MCP9537146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848926.1;locus_tag=NND05_06175;product=N-acetyltransferase;protein_id=MCP9537146.1;transl_table=11 JANDXE010000009.1 Genbank gene 47243 49219 . + . ID=gene-NND05_06180;Name=NND05_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06180 JANDXE010000009.1 Protein Homology CDS 47243 49219 . + 0 ID=cds-MCP9537147.1;Parent=gene-NND05_06180;Dbxref=NCBI_GP:MCP9537147.1;Name=MCP9537147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848927.1;locus_tag=NND05_06180;product=type IIA DNA topoisomerase subunit B;protein_id=MCP9537147.1;transl_table=11 JANDXE010000009.1 Genbank gene 49280 50863 . + . ID=gene-NND05_06185;Name=NND05_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06185 JANDXE010000009.1 Protein Homology CDS 49280 50863 . + 0 ID=cds-MCP9537148.1;Parent=gene-NND05_06185;Dbxref=NCBI_GP:MCP9537148.1;Name=MCP9537148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848928.1;locus_tag=NND05_06185;product=S41 family peptidase;protein_id=MCP9537148.1;transl_table=11 JANDXE010000009.1 Genbank gene 51063 52034 . - . ID=gene-NND05_06190;Name=NND05_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06190 JANDXE010000009.1 Protein Homology CDS 51063 52034 . - 0 ID=cds-MCP9537149.1;Parent=gene-NND05_06190;Dbxref=NCBI_GP:MCP9537149.1;Name=MCP9537149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848929.1;locus_tag=NND05_06190;product=bile acid:sodium symporter family protein;protein_id=MCP9537149.1;transl_table=11 JANDXE010000009.1 Genbank gene 52366 53400 . + . ID=gene-NND05_06195;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NND05_06195 JANDXE010000009.1 Protein Homology CDS 52366 53400 . + 0 ID=cds-MCP9537150.1;Parent=gene-NND05_06195;Dbxref=NCBI_GP:MCP9537150.1;Name=MCP9537150.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007134845.1;locus_tag=NND05_06195;product=Holliday junction branch migration DNA helicase RuvB;protein_id=MCP9537150.1;transl_table=11 JANDXE010000009.1 Genbank gene 53440 53925 . + . ID=gene-NND05_06200;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NND05_06200 JANDXE010000009.1 Protein Homology CDS 53440 53925 . + 0 ID=cds-MCP9537151.1;Parent=gene-NND05_06200;Dbxref=NCBI_GP:MCP9537151.1;Name=MCP9537151.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848932.1;locus_tag=NND05_06200;product=pantetheine-phosphate adenylyltransferase;protein_id=MCP9537151.1;transl_table=11 JANDXE010000009.1 Genbank gene 53945 54379 . + . ID=gene-NND05_06205;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NND05_06205 JANDXE010000009.1 Protein Homology CDS 53945 54379 . + 0 ID=cds-MCP9537152.1;Parent=gene-NND05_06205;Dbxref=NCBI_GP:MCP9537152.1;Name=MCP9537152.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018910826.1;locus_tag=NND05_06205;product=rRNA maturation RNase YbeY;protein_id=MCP9537152.1;transl_table=11 JANDXE010000009.1 Genbank gene 54709 55695 . - . ID=gene-NND05_06210;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=NND05_06210 JANDXE010000009.1 Protein Homology CDS 54709 55695 . - 0 ID=cds-MCP9537153.1;Parent=gene-NND05_06210;Dbxref=NCBI_GP:MCP9537153.1;Name=MCP9537153.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848935.1;locus_tag=NND05_06210;product=tRNA dihydrouridine synthase DusB;protein_id=MCP9537153.1;transl_table=11 JANDXE010000009.1 Genbank gene 56015 57145 . - . ID=gene-NND05_06215;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NND05_06215 JANDXE010000009.1 Protein Homology CDS 56015 57145 . - 0 ID=cds-MCP9537154.1;Parent=gene-NND05_06215;Dbxref=NCBI_GP:MCP9537154.1;Name=MCP9537154.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463161.1;locus_tag=NND05_06215;product=DNA-processing protein DprA;protein_id=MCP9537154.1;transl_table=11 JANDXE010000009.1 Genbank gene 57165 58457 . - . ID=gene-NND05_06220;Name=NND05_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06220 JANDXE010000009.1 Protein Homology CDS 57165 58457 . - 0 ID=cds-MCP9537155.1;Parent=gene-NND05_06220;Dbxref=NCBI_GP:MCP9537155.1;Name=MCP9537155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848937.1;locus_tag=NND05_06220;product=DUF2851 family protein;protein_id=MCP9537155.1;transl_table=11 JANDXE010000009.1 Genbank gene 58625 59038 . - . ID=gene-NND05_06225;Name=NND05_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06225 JANDXE010000009.1 Protein Homology CDS 58625 59038 . - 0 ID=cds-MCP9537156.1;Parent=gene-NND05_06225;Dbxref=NCBI_GP:MCP9537156.1;Name=MCP9537156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373214.1;locus_tag=NND05_06225;product=acyl-CoA thioesterase;protein_id=MCP9537156.1;transl_table=11 JANDXE010000009.1 Genbank gene 59200 59961 . + . ID=gene-NND05_06230;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NND05_06230 JANDXE010000009.1 Protein Homology CDS 59200 59961 . + 0 ID=cds-MCP9537157.1;Parent=gene-NND05_06230;Dbxref=NCBI_GP:MCP9537157.1;Name=MCP9537157.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018463608.1;locus_tag=NND05_06230;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=MCP9537157.1;transl_table=11 JANDXE010000009.1 Genbank gene 59968 61416 . + . ID=gene-NND05_06235;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NND05_06235 JANDXE010000009.1 Protein Homology CDS 59968 61416 . + 0 ID=cds-MCP9537158.1;Parent=gene-NND05_06235;Dbxref=NCBI_GP:MCP9537158.1;Name=MCP9537158.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919713.1;locus_tag=NND05_06235;product=signal peptidase I;protein_id=MCP9537158.1;transl_table=11 JANDXE010000009.1 Genbank gene 61452 61892 . + . ID=gene-NND05_06240;Name=NND05_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06240 JANDXE010000009.1 Protein Homology CDS 61452 61892 . + 0 ID=cds-MCP9537159.1;Parent=gene-NND05_06240;Dbxref=NCBI_GP:MCP9537159.1;Name=MCP9537159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021981.2;locus_tag=NND05_06240;product=S26 family signal peptidase;protein_id=MCP9537159.1;transl_table=11 JANDXE010000009.1 Genbank gene 62190 62807 . + . ID=gene-NND05_06245;Name=NND05_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06245 JANDXE010000009.1 Protein Homology CDS 62190 62807 . + 0 ID=cds-MCP9537160.1;Parent=gene-NND05_06245;Dbxref=NCBI_GP:MCP9537160.1;Name=MCP9537160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341357.1;locus_tag=NND05_06245;product=WbqC family protein;protein_id=MCP9537160.1;transl_table=11 JANDXE010000009.1 Genbank gene 63334 64953 . + . ID=gene-NND05_06250;Name=NND05_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06250 JANDXE010000009.1 GeneMarkS-2+ CDS 63334 64953 . + 0 ID=cds-MCP9537161.1;Parent=gene-NND05_06250;Dbxref=NCBI_GP:MCP9537161.1;Name=MCP9537161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06250;product=hypothetical protein;protein_id=MCP9537161.1;transl_table=11 JANDXE010000009.1 Genbank gene 65432 68116 . + . ID=gene-NND05_06255;Name=NND05_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06255 JANDXE010000009.1 GeneMarkS-2+ CDS 65432 68116 . + 0 ID=cds-MCP9537162.1;Parent=gene-NND05_06255;Dbxref=NCBI_GP:MCP9537162.1;Name=MCP9537162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06255;product=hypothetical protein;protein_id=MCP9537162.1;transl_table=11 JANDXE010000009.1 Genbank gene 69110 70486 . - . ID=gene-NND05_06260;Name=NND05_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06260 JANDXE010000009.1 Protein Homology CDS 69110 70486 . - 0 ID=cds-MCP9537163.1;Parent=gene-NND05_06260;Dbxref=NCBI_GP:MCP9537163.1;Name=MCP9537163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848948.1;locus_tag=NND05_06260;product=insulinase family protein;protein_id=MCP9537163.1;transl_table=11 JANDXE010000009.1 Genbank gene 70607 71542 . + . ID=gene-NND05_06265;Name=NND05_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06265 JANDXE010000009.1 Protein Homology CDS 70607 71542 . + 0 ID=cds-MCP9537164.1;Parent=gene-NND05_06265;Dbxref=NCBI_GP:MCP9537164.1;Name=MCP9537164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848949.1;locus_tag=NND05_06265;product=carbohydrate kinase;protein_id=MCP9537164.1;transl_table=11 JANDXE010000009.1 Genbank gene 71555 72742 . + . ID=gene-NND05_06270;Name=NND05_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06270 JANDXE010000009.1 Protein Homology CDS 71555 72742 . + 0 ID=cds-MCP9537165.1;Parent=gene-NND05_06270;Dbxref=NCBI_GP:MCP9537165.1;Name=MCP9537165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011003.1;locus_tag=NND05_06270;product=FprA family A-type flavoprotein;protein_id=MCP9537165.1;transl_table=11 JANDXE010000009.1 Genbank gene 72998 74248 . + . ID=gene-NND05_06275;Name=NND05_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06275 JANDXE010000009.1 Protein Homology CDS 72998 74248 . + 0 ID=cds-MCP9537166.1;Parent=gene-NND05_06275;Dbxref=NCBI_GP:MCP9537166.1;Name=MCP9537166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644277.1;locus_tag=NND05_06275;product=ATP-binding protein;protein_id=MCP9537166.1;transl_table=11 JANDXE010000009.1 Genbank gene 74335 74865 . - . ID=gene-NND05_06280;Name=NND05_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06280 JANDXE010000009.1 Protein Homology CDS 74335 74865 . - 0 ID=cds-MCP9537167.1;Parent=gene-NND05_06280;Dbxref=NCBI_GP:MCP9537167.1;Name=MCP9537167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013064753.1;locus_tag=NND05_06280;product=TIGR00730 family Rossman fold protein;protein_id=MCP9537167.1;transl_table=11 JANDXE010000009.1 Genbank pseudogene 75020 75258 . + . ID=gene-NND05_06285;Name=NND05_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NND05_06285;pseudo=true JANDXE010000009.1 Protein Homology CDS 75020 75258 . + 0 ID=cds-NND05_06285;Parent=gene-NND05_06285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006848965.1;locus_tag=NND05_06285;product=hypothetical protein;pseudo=true;transl_table=11 JANDXE010000009.1 Genbank gene 75327 75518 . + . ID=gene-NND05_06290;Name=NND05_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06290 JANDXE010000009.1 GeneMarkS-2+ CDS 75327 75518 . + 0 ID=cds-MCP9537168.1;Parent=gene-NND05_06290;Dbxref=NCBI_GP:MCP9537168.1;Name=MCP9537168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06290;product=hypothetical protein;protein_id=MCP9537168.1;transl_table=11 JANDXE010000009.1 Genbank gene 76062 76532 . + . ID=gene-NND05_06295;Name=NND05_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06295 JANDXE010000009.1 GeneMarkS-2+ CDS 76062 76532 . + 0 ID=cds-MCP9537169.1;Parent=gene-NND05_06295;Dbxref=NCBI_GP:MCP9537169.1;Name=MCP9537169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06295;product=hypothetical protein;protein_id=MCP9537169.1;transl_table=11 JANDXE010000009.1 Genbank gene 76537 77901 . + . ID=gene-NND05_06300;Name=NND05_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06300 JANDXE010000009.1 Protein Homology CDS 76537 77901 . + 0 ID=cds-MCP9537170.1;Parent=gene-NND05_06300;Dbxref=NCBI_GP:MCP9537170.1;Name=MCP9537170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024702.2;locus_tag=NND05_06300;product=leucine-rich repeat domain-containing protein;protein_id=MCP9537170.1;transl_table=11 JANDXE010000009.1 Genbank gene 78351 79664 . + . ID=gene-NND05_06305;Name=NND05_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06305 JANDXE010000009.1 Protein Homology CDS 78351 79664 . + 0 ID=cds-MCP9537171.1;Parent=gene-NND05_06305;Dbxref=NCBI_GP:MCP9537171.1;Name=MCP9537171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859607.1;locus_tag=NND05_06305;product=ATP-binding protein;protein_id=MCP9537171.1;transl_table=11 JANDXE010000009.1 Genbank gene 79888 81237 . - . ID=gene-NND05_06310;Name=NND05_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06310 JANDXE010000009.1 Protein Homology CDS 79888 81237 . - 0 ID=cds-MCP9537172.1;Parent=gene-NND05_06310;Dbxref=NCBI_GP:MCP9537172.1;Name=MCP9537172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024356.2;locus_tag=NND05_06310;product=DUF3843 family protein;protein_id=MCP9537172.1;transl_table=11 JANDXE010000009.1 Genbank gene 81565 83556 . + . ID=gene-NND05_06315;Name=NND05_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06315 JANDXE010000009.1 Protein Homology CDS 81565 83556 . + 0 ID=cds-MCP9537173.1;Parent=gene-NND05_06315;Dbxref=NCBI_GP:MCP9537173.1;Name=MCP9537173.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845545.1;locus_tag=NND05_06315;product=DEAD/DEAH box helicase;protein_id=MCP9537173.1;transl_table=11 JANDXE010000009.1 Genbank gene 84033 84851 . + . ID=gene-NND05_06320;Name=NND05_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06320 JANDXE010000009.1 GeneMarkS-2+ CDS 84033 84851 . + 0 ID=cds-MCP9537174.1;Parent=gene-NND05_06320;Dbxref=NCBI_GP:MCP9537174.1;Name=MCP9537174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06320;product=hypothetical protein;protein_id=MCP9537174.1;transl_table=11 JANDXE010000009.1 Genbank gene 84890 85489 . + . ID=gene-NND05_06325;Name=NND05_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06325 JANDXE010000009.1 GeneMarkS-2+ CDS 84890 85489 . + 0 ID=cds-MCP9537175.1;Parent=gene-NND05_06325;Dbxref=NCBI_GP:MCP9537175.1;Name=MCP9537175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06325;product=hypothetical protein;protein_id=MCP9537175.1;transl_table=11 JANDXE010000009.1 Genbank gene 85826 86998 . + . ID=gene-NND05_06330;Name=NND05_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06330 JANDXE010000009.1 Protein Homology CDS 85826 86998 . + 0 ID=cds-MCP9537176.1;Parent=gene-NND05_06330;Dbxref=NCBI_GP:MCP9537176.1;Name=MCP9537176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849258.1;locus_tag=NND05_06330;product=AAA family ATPase;protein_id=MCP9537176.1;transl_table=11 JANDXE010000009.1 Genbank gene 87013 89652 . + . ID=gene-NND05_06335;Name=NND05_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06335 JANDXE010000009.1 Protein Homology CDS 87013 89652 . + 0 ID=cds-MCP9537177.1;Parent=gene-NND05_06335;Dbxref=NCBI_GP:MCP9537177.1;Name=MCP9537177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849257.1;locus_tag=NND05_06335;product=beta-glycosidase;protein_id=MCP9537177.1;transl_table=11 JANDXE010000009.1 Genbank gene 89842 91983 . - . ID=gene-NND05_06340;Name=NND05_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06340 JANDXE010000009.1 Protein Homology CDS 89842 91983 . - 0 ID=cds-MCP9537178.1;Parent=gene-NND05_06340;Dbxref=NCBI_GP:MCP9537178.1;Name=MCP9537178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369292.1;locus_tag=NND05_06340;product=S46 family peptidase;protein_id=MCP9537178.1;transl_table=11 JANDXE010000009.1 Genbank gene 92319 92597 . - . ID=gene-NND05_06345;Name=NND05_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06345 JANDXE010000009.1 GeneMarkS-2+ CDS 92319 92597 . - 0 ID=cds-MCP9537179.1;Parent=gene-NND05_06345;Dbxref=NCBI_GP:MCP9537179.1;Name=MCP9537179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06345;product=antitoxin VbhA family protein;protein_id=MCP9537179.1;transl_table=11 JANDXE010000009.1 Genbank gene 94134 94880 . + . ID=gene-NND05_06350;Name=NND05_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06350 JANDXE010000009.1 GeneMarkS-2+ CDS 94134 94880 . + 0 ID=cds-MCP9537180.1;Parent=gene-NND05_06350;Dbxref=NCBI_GP:MCP9537180.1;Name=MCP9537180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NND05_06350;product=hypothetical protein;protein_id=MCP9537180.1;transl_table=11 JANDXE010000009.1 Genbank gene 94947 95633 . - . ID=gene-NND05_06355;Name=NND05_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06355 JANDXE010000009.1 Protein Homology CDS 94947 95633 . - 0 ID=cds-MCP9537181.1;Parent=gene-NND05_06355;Dbxref=NCBI_GP:MCP9537181.1;Name=MCP9537181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410855.1;locus_tag=NND05_06355;product=hypothetical protein;protein_id=MCP9537181.1;transl_table=11 JANDXE010000009.1 Genbank gene 95677 96219 . - . ID=gene-NND05_06360;Name=NND05_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06360 JANDXE010000009.1 Protein Homology CDS 95677 96219 . - 0 ID=cds-MCP9537182.1;Parent=gene-NND05_06360;Dbxref=NCBI_GP:MCP9537182.1;Name=MCP9537182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849253.1;locus_tag=NND05_06360;product=hypothetical protein;protein_id=MCP9537182.1;transl_table=11 JANDXE010000009.1 Genbank gene 96269 97732 . - . ID=gene-NND05_06365;Name=NND05_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06365 JANDXE010000009.1 Protein Homology CDS 96269 97732 . - 0 ID=cds-MCP9537183.1;Parent=gene-NND05_06365;Dbxref=NCBI_GP:MCP9537183.1;Name=MCP9537183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849251.1;locus_tag=NND05_06365;product=lipopolysaccharide biosynthesis protein;protein_id=MCP9537183.1;transl_table=11 JANDXE010000009.1 Genbank gene 97827 99056 . - . ID=gene-NND05_06370;Name=NND05_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06370 JANDXE010000009.1 Protein Homology CDS 97827 99056 . - 0 ID=cds-MCP9537184.1;Parent=gene-NND05_06370;Dbxref=NCBI_GP:MCP9537184.1;Name=MCP9537184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341335.1;locus_tag=NND05_06370;product=spore maturation protein;protein_id=MCP9537184.1;transl_table=11 JANDXE010000009.1 Genbank gene 99220 100551 . - . ID=gene-NND05_06375;Name=NND05_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06375 JANDXE010000009.1 Protein Homology CDS 99220 100551 . - 0 ID=cds-MCP9537185.1;Parent=gene-NND05_06375;Dbxref=NCBI_GP:MCP9537185.1;Name=MCP9537185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=NND05_06375;product=ATP-binding protein;protein_id=MCP9537185.1;transl_table=11 JANDXE010000009.1 Genbank gene 100896 101843 . + . ID=gene-NND05_06380;Name=NND05_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06380 JANDXE010000009.1 Protein Homology CDS 100896 101843 . + 0 ID=cds-MCP9537186.1;Parent=gene-NND05_06380;Dbxref=NCBI_GP:MCP9537186.1;Name=MCP9537186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849245.1;locus_tag=NND05_06380;product=cation diffusion facilitator family transporter;protein_id=MCP9537186.1;transl_table=11 JANDXE010000009.1 Genbank gene 101894 103951 . - . ID=gene-NND05_06385;Name=NND05_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06385 JANDXE010000009.1 Protein Homology CDS 101894 103951 . - 0 ID=cds-MCP9537187.1;Parent=gene-NND05_06385;Dbxref=NCBI_GP:MCP9537187.1;Name=MCP9537187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899979.1;locus_tag=NND05_06385;product=TonB-dependent receptor;protein_id=MCP9537187.1;transl_table=11 JANDXE010000009.1 Genbank gene 104230 104736 . + . ID=gene-NND05_06390;Name=NND05_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06390 JANDXE010000009.1 Protein Homology CDS 104230 104736 . + 0 ID=cds-MCP9537188.1;Parent=gene-NND05_06390;Dbxref=NCBI_GP:MCP9537188.1;Name=MCP9537188.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015530974.1;locus_tag=NND05_06390;product=flavin reductase;protein_id=MCP9537188.1;transl_table=11 JANDXE010000009.1 Genbank gene 104747 105049 . + . ID=gene-NND05_06395;Name=NND05_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06395 JANDXE010000009.1 Protein Homology CDS 104747 105049 . + 0 ID=cds-MCP9537189.1;Parent=gene-NND05_06395;Dbxref=NCBI_GP:MCP9537189.1;Name=MCP9537189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849241.1;locus_tag=NND05_06395;product=ATP-dependent Clp protease adaptor ClpS;protein_id=MCP9537189.1;transl_table=11 JANDXE010000009.1 Genbank gene 105124 107400 . + . ID=gene-NND05_06400;Name=NND05_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06400 JANDXE010000009.1 Protein Homology CDS 105124 107400 . + 0 ID=cds-MCP9537190.1;Parent=gene-NND05_06400;Dbxref=NCBI_GP:MCP9537190.1;Name=MCP9537190.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849240.1;locus_tag=NND05_06400;product=AAA family ATPase;protein_id=MCP9537190.1;transl_table=11 JANDXE010000009.1 Genbank gene 107407 108072 . + . ID=gene-NND05_06405;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=NND05_06405 JANDXE010000009.1 Protein Homology CDS 107407 108072 . + 0 ID=cds-MCP9537191.1;Parent=gene-NND05_06405;Dbxref=NCBI_GP:MCP9537191.1;Name=MCP9537191.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849239.1;locus_tag=NND05_06405;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=MCP9537191.1;transl_table=11 JANDXE010000009.1 Genbank gene 108199 109809 . - . ID=gene-NND05_06410;Name=NND05_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06410 JANDXE010000009.1 Protein Homology CDS 108199 109809 . - 0 ID=cds-MCP9537192.1;Parent=gene-NND05_06410;Dbxref=NCBI_GP:MCP9537192.1;Name=MCP9537192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849238.1;locus_tag=NND05_06410;product=alkaline phosphatase family protein;protein_id=MCP9537192.1;transl_table=11 JANDXE010000009.1 Genbank gene 109891 112023 . - . ID=gene-NND05_06415;Name=NND05_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06415 JANDXE010000009.1 Protein Homology CDS 109891 112023 . - 0 ID=cds-MCP9537193.1;Parent=gene-NND05_06415;Dbxref=NCBI_GP:MCP9537193.1;Name=MCP9537193.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013063186.1;locus_tag=NND05_06415;product=heavy metal translocating P-type ATPase;protein_id=MCP9537193.1;transl_table=11 JANDXE010000009.1 Genbank gene 112245 112318 . - . ID=gene-NND05_06420;Name=NND05_06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=NND05_06420 JANDXE010000009.1 tRNAscan-SE tRNA 112245 112318 . - . ID=rna-NND05_06420;Parent=gene-NND05_06420;anticodon=(pos:complement(112282..112284));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_06420;product=tRNA-Ile JANDXE010000009.1 tRNAscan-SE exon 112245 112318 . - . ID=exon-NND05_06420-1;Parent=rna-NND05_06420;anticodon=(pos:complement(112282..112284));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NND05_06420;product=tRNA-Ile JANDXE010000009.1 Genbank gene 112494 115133 . + . ID=gene-NND05_06425;Name=NND05_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06425 JANDXE010000009.1 Protein Homology CDS 112494 115133 . + 0 ID=cds-MCP9537194.1;Parent=gene-NND05_06425;Dbxref=NCBI_GP:MCP9537194.1;Name=MCP9537194.1;Ontology_term=GO:0006816,GO:0005388;gbkey=CDS;go_function=P-type calcium transporter activity|0005388||IEA;go_process=calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849208.1;locus_tag=NND05_06425;product=calcium-translocating P-type ATPase%2C PMCA-type;protein_id=MCP9537194.1;transl_table=11 JANDXE010000009.1 Genbank gene 115198 116136 . + . ID=gene-NND05_06430;Name=NND05_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06430 JANDXE010000009.1 Protein Homology CDS 115198 116136 . + 0 ID=cds-MCP9537195.1;Parent=gene-NND05_06430;Dbxref=NCBI_GP:MCP9537195.1;Name=MCP9537195.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018919781.1;locus_tag=NND05_06430;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=MCP9537195.1;transl_table=11 JANDXE010000009.1 Genbank gene 116188 117021 . + . ID=gene-NND05_06435;Name=NND05_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06435 JANDXE010000009.1 Protein Homology CDS 116188 117021 . + 0 ID=cds-MCP9537196.1;Parent=gene-NND05_06435;Dbxref=NCBI_GP:MCP9537196.1;Name=MCP9537196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849206.1;locus_tag=NND05_06435;product=CPBP family intramembrane metalloprotease;protein_id=MCP9537196.1;transl_table=11 JANDXE010000009.1 Genbank gene 117090 117968 . + . ID=gene-NND05_06440;Name=NND05_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NND05_06440 JANDXE010000009.1 Protein Homology CDS 117090 117968 . + 0 ID=cds-MCP9537197.1;Parent=gene-NND05_06440;Dbxref=NCBI_GP:MCP9537197.1;Name=MCP9537197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006849205.1;locus_tag=NND05_06440;product=hypothetical protein;protein_id=MCP9537197.1;transl_table=11 ###