##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2678380v1 #!genome-build-accession NCBI_Assembly:GCA_026783805.1 #!annotation-date 02/25/2022 17:51:34 #!annotation-source NCBI ##sequence-region JAKUZA010000010.1 1 4348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000010.1 Genbank region 1 4348 . + . ID=JAKUZA010000010.1:1..4348;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000010.1 Genbank gene 30 392 . - . ID=gene-MK542_01115;Name=MK542_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01115 JAKUZA010000010.1 Protein Homology CDS 30 392 . - 0 ID=cds-MCY7216775.1;Parent=gene-MK542_01115;Dbxref=NCBI_GP:MCY7216775.1;Name=MCY7216775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591890.1;locus_tag=MK542_01115;product=S1 RNA-binding domain-containing protein;protein_id=MCY7216775.1;transl_table=11 JAKUZA010000010.1 Genbank gene 392 1792 . - . ID=gene-MK542_01120;Name=MK542_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01120 JAKUZA010000010.1 Protein Homology CDS 392 1792 . - 0 ID=cds-MCY7216776.1;Parent=gene-MK542_01120;Dbxref=NCBI_GP:MCY7216776.1;Name=MCY7216776.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185650.1;locus_tag=MK542_01120;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7216776.1;transl_table=11 JAKUZA010000010.1 Genbank gene 1830 2462 . - . ID=gene-MK542_01125;Name=MK542_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01125 JAKUZA010000010.1 Protein Homology CDS 1830 2462 . - 0 ID=cds-MCY7216777.1;Parent=gene-MK542_01125;Dbxref=NCBI_GP:MCY7216777.1;Name=MCY7216777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659067.1;locus_tag=MK542_01125;product=response regulator transcription factor;protein_id=MCY7216777.1;transl_table=11 JAKUZA010000010.1 Genbank gene 2440 3459 . - . ID=gene-MK542_01130;Name=MK542_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01130 JAKUZA010000010.1 Protein Homology CDS 2440 3459 . - 0 ID=cds-MCY7216778.1;Parent=gene-MK542_01130;Dbxref=NCBI_GP:MCY7216778.1;Name=MCY7216778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896967.1;locus_tag=MK542_01130;product=sensor histidine kinase;protein_id=MCY7216778.1;transl_table=11 JAKUZA010000010.1 Genbank gene 3456 4151 . - . ID=gene-MK542_01135;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=MK542_01135 JAKUZA010000010.1 Protein Homology CDS 3456 4151 . - 0 ID=cds-MCY7216779.1;Parent=gene-MK542_01135;Dbxref=NCBI_GP:MCY7216779.1;Name=MCY7216779.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920051.1;locus_tag=MK542_01135;product=cell wall-active antibiotics response protein LiaF;protein_id=MCY7216779.1;transl_table=11 ##sequence-region JAKUZA010000011.1 1 21536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000011.1 Genbank region 1 21536 . + . ID=JAKUZA010000011.1:1..21536;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000011.1 Genbank gene 180 1187 . - . ID=gene-MK542_01140;Name=MK542_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01140 JAKUZA010000011.1 Protein Homology CDS 180 1187 . - 0 ID=cds-MCY7216780.1;Parent=gene-MK542_01140;Dbxref=NCBI_GP:MCY7216780.1;Name=MCY7216780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906819.1;locus_tag=MK542_01140;product=ABC transporter substrate-binding protein;protein_id=MCY7216780.1;transl_table=11 JAKUZA010000011.1 Genbank gene 1721 3370 . + . ID=gene-MK542_01145;Name=fbpA;gbkey=Gene;gene=fbpA;gene_biotype=protein_coding;locus_tag=MK542_01145 JAKUZA010000011.1 Protein Homology CDS 1721 3370 . + 0 ID=cds-MCY7216781.1;Parent=gene-MK542_01145;Dbxref=NCBI_GP:MCY7216781.1;Name=MCY7216781.1;gbkey=CDS;gene=fbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_147466899.1;locus_tag=MK542_01145;product=Rqc2 family fibronectin-binding protein FbpA;protein_id=MCY7216781.1;transl_table=11 JAKUZA010000011.1 Genbank gene 3690 4532 . + . ID=gene-MK542_01150;Name=MK542_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01150 JAKUZA010000011.1 Protein Homology CDS 3690 4532 . + 0 ID=cds-MCY7216782.1;Parent=gene-MK542_01150;Dbxref=NCBI_GP:MCY7216782.1;Name=MCY7216782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256605.1;locus_tag=MK542_01150;product=DUF368 domain-containing protein;protein_id=MCY7216782.1;transl_table=11 JAKUZA010000011.1 Genbank gene 4532 5008 . + . ID=gene-MK542_01155;Name=MK542_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01155 JAKUZA010000011.1 Protein Homology CDS 4532 5008 . + 0 ID=cds-MCY7216783.1;Parent=gene-MK542_01155;Dbxref=NCBI_GP:MCY7216783.1;Name=MCY7216783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068525.1;locus_tag=MK542_01155;product=aminoacyl-tRNA deacylase;protein_id=MCY7216783.1;transl_table=11 JAKUZA010000011.1 Genbank gene 5096 5737 . + . ID=gene-MK542_01160;Name=MK542_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01160 JAKUZA010000011.1 Protein Homology CDS 5096 5737 . + 0 ID=cds-MCY7216784.1;Parent=gene-MK542_01160;Dbxref=NCBI_GP:MCY7216784.1;Name=MCY7216784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032463.1;locus_tag=MK542_01160;product=histidine phosphatase family protein;protein_id=MCY7216784.1;transl_table=11 JAKUZA010000011.1 Genbank gene 5832 7322 . + . ID=gene-MK542_01165;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=MK542_01165 JAKUZA010000011.1 Protein Homology CDS 5832 7322 . + 0 ID=cds-MCY7216785.1;Parent=gene-MK542_01165;Dbxref=NCBI_GP:MCY7216785.1;Name=MCY7216785.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003055423.1;locus_tag=MK542_01165;product=lysine--tRNA ligase;protein_id=MCY7216785.1;transl_table=11 JAKUZA010000011.1 Genbank gene 7401 8873 . - . ID=gene-MK542_01170;Name=MK542_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01170 JAKUZA010000011.1 Protein Homology CDS 7401 8873 . - 0 ID=cds-MCY7216786.1;Parent=gene-MK542_01170;Dbxref=NCBI_GP:MCY7216786.1;Name=MCY7216786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637969.1;locus_tag=MK542_01170;product=glycoside hydrolase family 1 protein;protein_id=MCY7216786.1;transl_table=11 JAKUZA010000011.1 Genbank gene 8883 10739 . - . ID=gene-MK542_01175;Name=MK542_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01175 JAKUZA010000011.1 Protein Homology CDS 8883 10739 . - 0 ID=cds-MCY7216787.1;Parent=gene-MK542_01175;Dbxref=NCBI_GP:MCY7216787.1;Name=MCY7216787.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090328.1;locus_tag=MK542_01175;product=glucose PTS transporter subunit IIA;protein_id=MCY7216787.1;transl_table=11 JAKUZA010000011.1 Genbank gene 10900 11652 . + . ID=gene-MK542_01180;Name=MK542_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01180 JAKUZA010000011.1 Protein Homology CDS 10900 11652 . + 0 ID=cds-MCY7216788.1;Parent=gene-MK542_01180;Dbxref=NCBI_GP:MCY7216788.1;Name=MCY7216788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090329.1;locus_tag=MK542_01180;product=MurR/RpiR family transcriptional regulator;protein_id=MCY7216788.1;transl_table=11 JAKUZA010000011.1 Genbank gene 11774 13030 . - . ID=gene-MK542_01185;Name=MK542_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01185 JAKUZA010000011.1 Protein Homology CDS 11774 13030 . - 0 ID=cds-MCY7216789.1;Parent=gene-MK542_01185;Dbxref=NCBI_GP:MCY7216789.1;Name=MCY7216789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894991.1;locus_tag=MK542_01185;product=ABC transporter permease;protein_id=MCY7216789.1;transl_table=11 JAKUZA010000011.1 Genbank gene 13030 13728 . - . ID=gene-MK542_01190;Name=MK542_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01190 JAKUZA010000011.1 Protein Homology CDS 13030 13728 . - 0 ID=cds-MCY7216790.1;Parent=gene-MK542_01190;Dbxref=NCBI_GP:MCY7216790.1;Name=MCY7216790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590696.1;locus_tag=MK542_01190;product=ABC transporter ATP-binding protein;protein_id=MCY7216790.1;transl_table=11 JAKUZA010000011.1 Genbank gene 13712 14866 . - . ID=gene-MK542_01195;Name=MK542_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01195 JAKUZA010000011.1 Protein Homology CDS 13712 14866 . - 0 ID=cds-MCY7216791.1;Parent=gene-MK542_01195;Dbxref=NCBI_GP:MCY7216791.1;Name=MCY7216791.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897231.1;locus_tag=MK542_01195;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCY7216791.1;transl_table=11 JAKUZA010000011.1 Genbank gene 15077 16426 . + . ID=gene-MK542_01200;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=MK542_01200 JAKUZA010000011.1 Protein Homology CDS 15077 16426 . + 0 ID=cds-MCY7216792.1;Parent=gene-MK542_01200;Dbxref=NCBI_GP:MCY7216792.1;Name=MCY7216792.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511376.1;locus_tag=MK542_01200;product=glutathione-disulfide reductase;protein_id=MCY7216792.1;transl_table=11 JAKUZA010000011.1 Genbank gene 16950 18092 . - . ID=gene-MK542_01205;Name=MK542_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01205 JAKUZA010000011.1 Protein Homology CDS 16950 18092 . - 0 ID=cds-MCY7216793.1;Parent=gene-MK542_01205;Dbxref=NCBI_GP:MCY7216793.1;Name=MCY7216793.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009731394.1;locus_tag=MK542_01205;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=MCY7216793.1;transl_table=11 JAKUZA010000011.1 Genbank gene 18536 19081 . + . ID=gene-MK542_01210;Name=MK542_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01210 JAKUZA010000011.1 Protein Homology CDS 18536 19081 . + 0 ID=cds-MCY7216794.1;Parent=gene-MK542_01210;Dbxref=NCBI_GP:MCY7216794.1;Name=MCY7216794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009443056.1;locus_tag=MK542_01210;product=biotin transporter BioY;protein_id=MCY7216794.1;transl_table=11 JAKUZA010000011.1 Genbank gene 19091 19306 . - . ID=gene-MK542_01215;Name=MK542_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01215 JAKUZA010000011.1 Protein Homology CDS 19091 19306 . - 0 ID=cds-MCY7216795.1;Parent=gene-MK542_01215;Dbxref=NCBI_GP:MCY7216795.1;Name=MCY7216795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605433.1;locus_tag=MK542_01215;product=YdbC family protein;protein_id=MCY7216795.1;transl_table=11 JAKUZA010000011.1 Genbank gene 19396 19752 . + . ID=gene-MK542_01220;Name=MK542_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01220 JAKUZA010000011.1 Protein Homology CDS 19396 19752 . + 0 ID=cds-MCY7216796.1;Parent=gene-MK542_01220;Dbxref=NCBI_GP:MCY7216796.1;Name=MCY7216796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920752.1;locus_tag=MK542_01220;product=hypothetical protein;protein_id=MCY7216796.1;transl_table=11 JAKUZA010000011.1 Genbank gene 20030 21316 . - . ID=gene-MK542_01225;Name=MK542_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01225 JAKUZA010000011.1 Protein Homology CDS 20030 21316 . - 0 ID=cds-MCY7216797.1;Parent=gene-MK542_01225;Dbxref=NCBI_GP:MCY7216797.1;Name=MCY7216797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000169115.1;locus_tag=MK542_01225;product=U32 family peptidase;protein_id=MCY7216797.1;transl_table=11 ##sequence-region JAKUZA010000012.1 1 76239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000012.1 Genbank region 1 76239 . + . ID=JAKUZA010000012.1:1..76239;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000012.1 Genbank gene 49 1317 . - . ID=gene-MK542_01230;Name=MK542_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01230 JAKUZA010000012.1 Protein Homology CDS 49 1317 . - 0 ID=cds-MCY7216798.1;Parent=gene-MK542_01230;Dbxref=NCBI_GP:MCY7216798.1;Name=MCY7216798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042613.1;locus_tag=MK542_01230;product=purine permease;protein_id=MCY7216798.1;transl_table=11 JAKUZA010000012.1 Genbank gene 1319 1900 . - . ID=gene-MK542_01235;Name=MK542_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01235 JAKUZA010000012.1 Protein Homology CDS 1319 1900 . - 0 ID=cds-MCY7216799.1;Parent=gene-MK542_01235;Dbxref=NCBI_GP:MCY7216799.1;Name=MCY7216799.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770427.1;locus_tag=MK542_01235;product=xanthine phosphoribosyltransferase;protein_id=MCY7216799.1;transl_table=11 JAKUZA010000012.1 cmsearch riboswitch 2001 2098 . - . ID=id-JAKUZA010000012.1:2001..2098;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000012.1 Genbank gene 2096 3079 . - . ID=gene-MK542_01240;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=MK542_01240 JAKUZA010000012.1 Protein Homology CDS 2096 3079 . - 0 ID=cds-MCY7216800.1;Parent=gene-MK542_01240;Dbxref=NCBI_GP:MCY7216800.1;Name=MCY7216800.1;Ontology_term=GO:0015950,GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide interconversion|0015950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007516839.1;locus_tag=MK542_01240;product=GMP reductase;protein_id=MCY7216800.1;transl_table=11 JAKUZA010000012.1 Genbank gene 3406 3591 . - . ID=gene-MK542_01245;Name=MK542_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01245 JAKUZA010000012.1 Protein Homology CDS 3406 3591 . - 0 ID=cds-MCY7216801.1;Parent=gene-MK542_01245;Dbxref=NCBI_GP:MCY7216801.1;Name=MCY7216801.1;Ontology_term=GO:0015031;gbkey=CDS;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895542.1;locus_tag=MK542_01245;product=twin-arginine translocase TatA/TatE family subunit;protein_id=MCY7216801.1;transl_table=11 JAKUZA010000012.1 Genbank gene 3591 4298 . - . ID=gene-MK542_01250;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=MK542_01250 JAKUZA010000012.1 Protein Homology CDS 3591 4298 . - 0 ID=cds-MCY7216802.1;Parent=gene-MK542_01250;Dbxref=NCBI_GP:MCY7216802.1;Name=MCY7216802.1;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589815.1;locus_tag=MK542_01250;product=twin-arginine translocase subunit TatC;protein_id=MCY7216802.1;transl_table=11 JAKUZA010000012.1 Genbank gene 4291 5988 . - . ID=gene-MK542_01255;Name=MK542_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01255 JAKUZA010000012.1 Protein Homology CDS 4291 5988 . - 0 ID=cds-MCY7216803.1;Parent=gene-MK542_01255;Dbxref=NCBI_GP:MCY7216803.1;Name=MCY7216803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592240.1;locus_tag=MK542_01255;product=FTR1 family iron permease;protein_id=MCY7216803.1;transl_table=11 JAKUZA010000012.1 Genbank gene 5966 7174 . - . ID=gene-MK542_01260;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=MK542_01260 JAKUZA010000012.1 Protein Homology CDS 5966 7174 . - 0 ID=cds-MCY7216804.1;Parent=gene-MK542_01260;Dbxref=NCBI_GP:MCY7216804.1;Name=MCY7216804.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909774.1;locus_tag=MK542_01260;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=MCY7216804.1;transl_table=11 JAKUZA010000012.1 Genbank gene 7179 8051 . - . ID=gene-MK542_01265;Name=MK542_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01265 JAKUZA010000012.1 Protein Homology CDS 7179 8051 . - 0 ID=cds-MCY7216805.1;Parent=gene-MK542_01265;Dbxref=NCBI_GP:MCY7216805.1;Name=MCY7216805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660262.1;locus_tag=MK542_01265;product=EfeM/EfeO family lipoprotein;protein_id=MCY7216805.1;transl_table=11 JAKUZA010000012.1 Genbank gene 8179 9732 . - . ID=gene-MK542_01270;Name=MK542_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01270 JAKUZA010000012.1 Protein Homology CDS 8179 9732 . - 0 ID=cds-MCY7216806.1;Parent=gene-MK542_01270;Dbxref=NCBI_GP:MCY7216806.1;Name=MCY7216806.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589811.1;locus_tag=MK542_01270;product=chloride channel protein;protein_id=MCY7216806.1;transl_table=11 JAKUZA010000012.1 Genbank gene 9955 10773 . - . ID=gene-MK542_01275;Name=MK542_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01275 JAKUZA010000012.1 Protein Homology CDS 9955 10773 . - 0 ID=cds-MCY7216807.1;Parent=gene-MK542_01275;Dbxref=NCBI_GP:MCY7216807.1;Name=MCY7216807.1;Ontology_term=GO:0070007;gbkey=CDS;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589807.1;locus_tag=MK542_01275;product=PrsW family glutamic-type intramembrane protease;protein_id=MCY7216807.1;transl_table=11 JAKUZA010000012.1 Genbank gene 11168 12547 . - . ID=gene-MK542_01280;Name=MK542_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01280 JAKUZA010000012.1 Protein Homology CDS 11168 12547 . - 0 ID=cds-MCY7216808.1;Parent=gene-MK542_01280;Dbxref=NCBI_GP:MCY7216808.1;Name=MCY7216808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398482.1;locus_tag=MK542_01280;product=FAD-dependent oxidoreductase;protein_id=MCY7216808.1;transl_table=11 JAKUZA010000012.1 Genbank gene 12813 13742 . + . ID=gene-MK542_01285;Name=MK542_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01285 JAKUZA010000012.1 Protein Homology CDS 12813 13742 . + 0 ID=cds-MCY7216809.1;Parent=gene-MK542_01285;Dbxref=NCBI_GP:MCY7216809.1;Name=MCY7216809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930388.1;locus_tag=MK542_01285;product=FAD:protein FMN transferase;protein_id=MCY7216809.1;transl_table=11 JAKUZA010000012.1 Genbank gene 13784 14389 . + . ID=gene-MK542_01290;Name=MK542_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01290 JAKUZA010000012.1 Protein Homology CDS 13784 14389 . + 0 ID=cds-MCY7216810.1;Parent=gene-MK542_01290;Dbxref=NCBI_GP:MCY7216810.1;Name=MCY7216810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153967.1;locus_tag=MK542_01290;product=NAD(P)H-dependent oxidoreductase;protein_id=MCY7216810.1;transl_table=11 JAKUZA010000012.1 Genbank gene 14407 15645 . + . ID=gene-MK542_01295;Name=MK542_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01295 JAKUZA010000012.1 Protein Homology CDS 14407 15645 . + 0 ID=cds-MCY7216811.1;Parent=gene-MK542_01295;Dbxref=NCBI_GP:MCY7216811.1;Name=MCY7216811.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000573.1;locus_tag=MK542_01295;product=NAD(P)H-dependent oxidoreductase;protein_id=MCY7216811.1;transl_table=11 JAKUZA010000012.1 Genbank gene 15748 16629 . - . ID=gene-MK542_01300;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=MK542_01300 JAKUZA010000012.1 Protein Homology CDS 15748 16629 . - 0 ID=cds-MCY7216812.1;Parent=gene-MK542_01300;Dbxref=NCBI_GP:MCY7216812.1;Name=MCY7216812.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003080925.1;locus_tag=MK542_01300;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=MCY7216812.1;transl_table=11 JAKUZA010000012.1 Genbank gene 16732 17808 . - . ID=gene-MK542_01305;Name=MK542_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01305 JAKUZA010000012.1 Protein Homology CDS 16732 17808 . - 0 ID=cds-MCY7216813.1;Parent=gene-MK542_01305;Dbxref=NCBI_GP:MCY7216813.1;Name=MCY7216813.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=MK542_01305;product=aspartate-semialdehyde dehydrogenase;protein_id=MCY7216813.1;transl_table=11 JAKUZA010000012.1 Genbank gene 18406 19059 . - . ID=gene-MK542_01310;Name=MK542_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01310 JAKUZA010000012.1 Protein Homology CDS 18406 19059 . - 0 ID=cds-MCY7216814.1;Parent=gene-MK542_01310;Dbxref=NCBI_GP:MCY7216814.1;Name=MCY7216814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754918.1;locus_tag=MK542_01310;product=DNA alkylation repair protein;protein_id=MCY7216814.1;transl_table=11 JAKUZA010000012.1 Genbank gene 19063 19674 . - . ID=gene-MK542_01315;Name=MK542_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01315 JAKUZA010000012.1 Protein Homology CDS 19063 19674 . - 0 ID=cds-MCY7216815.1;Parent=gene-MK542_01315;Dbxref=NCBI_GP:MCY7216815.1;Name=MCY7216815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902938.1;locus_tag=MK542_01315;product=DUF5052 family protein;protein_id=MCY7216815.1;transl_table=11 JAKUZA010000012.1 Genbank gene 19671 20204 . - . ID=gene-MK542_01320;Name=MK542_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01320 JAKUZA010000012.1 Protein Homology CDS 19671 20204 . - 0 ID=cds-MCY7216816.1;Parent=gene-MK542_01320;Dbxref=NCBI_GP:MCY7216816.1;Name=MCY7216816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660504.1;locus_tag=MK542_01320;product=GNAT family N-acetyltransferase;protein_id=MCY7216816.1;transl_table=11 JAKUZA010000012.1 Genbank gene 20276 21946 . - . ID=gene-MK542_01325;Name=MK542_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01325 JAKUZA010000012.1 Protein Homology CDS 20276 21946 . - 0 ID=cds-MCY7216817.1;Parent=gene-MK542_01325;Dbxref=NCBI_GP:MCY7216817.1;Name=MCY7216817.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803354.1;locus_tag=MK542_01325;product=formate--tetrahydrofolate ligase;protein_id=MCY7216817.1;transl_table=11 JAKUZA010000012.1 Genbank gene 22166 22858 . + . ID=gene-MK542_01330;Name=MK542_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01330 JAKUZA010000012.1 Protein Homology CDS 22166 22858 . + 0 ID=cds-MCY7216818.1;Parent=gene-MK542_01330;Dbxref=NCBI_GP:MCY7216818.1;Name=MCY7216818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590367.1;locus_tag=MK542_01330;product=phosphopantothenate--cysteine ligase;protein_id=MCY7216818.1;transl_table=11 JAKUZA010000012.1 Genbank gene 22855 23406 . + . ID=gene-MK542_01335;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=MK542_01335 JAKUZA010000012.1 Protein Homology CDS 22855 23406 . + 0 ID=cds-MCY7216819.1;Parent=gene-MK542_01335;Dbxref=NCBI_GP:MCY7216819.1;Name=MCY7216819.1;Ontology_term=GO:0015937,GO:0004633;gbkey=CDS;gene=coaC;go_function=phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568896.1;locus_tag=MK542_01335;product=phosphopantothenoylcysteine decarboxylase;protein_id=MCY7216819.1;transl_table=11 JAKUZA010000012.1 Genbank gene 23390 23953 . + . ID=gene-MK542_01340;Name=MK542_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01340 JAKUZA010000012.1 Protein Homology CDS 23390 23953 . + 0 ID=cds-MCY7216820.1;Parent=gene-MK542_01340;Dbxref=NCBI_GP:MCY7216820.1;Name=MCY7216820.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909710.1;locus_tag=MK542_01340;product=ECF transporter S component;protein_id=MCY7216820.1;transl_table=11 JAKUZA010000012.1 Genbank gene 24160 25878 . + . ID=gene-MK542_01345;Name=MK542_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01345 JAKUZA010000012.1 Protein Homology CDS 24160 25878 . + 0 ID=cds-MCY7216821.1;Parent=gene-MK542_01345;Dbxref=NCBI_GP:MCY7216821.1;Name=MCY7216821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252698.1;locus_tag=MK542_01345;product=phospho-sugar mutase;protein_id=MCY7216821.1;transl_table=11 JAKUZA010000012.1 Genbank gene 26002 26349 . + . ID=gene-MK542_01350;Name=MK542_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01350 JAKUZA010000012.1 Protein Homology CDS 26002 26349 . + 0 ID=cds-MCY7216822.1;Parent=gene-MK542_01350;Dbxref=NCBI_GP:MCY7216822.1;Name=MCY7216822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904523.1;locus_tag=MK542_01350;product=thioredoxin;protein_id=MCY7216822.1;transl_table=11 JAKUZA010000012.1 Genbank gene 26389 27552 . - . ID=gene-MK542_01355;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=MK542_01355 JAKUZA010000012.1 Protein Homology CDS 26389 27552 . - 0 ID=cds-MCY7216823.1;Parent=gene-MK542_01355;Dbxref=NCBI_GP:MCY7216823.1;Name=MCY7216823.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027035.1;locus_tag=MK542_01355;product=A/G-specific adenine glycosylase;protein_id=MCY7216823.1;transl_table=11 JAKUZA010000012.1 Genbank gene 27718 28695 . - . ID=gene-MK542_01360;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=MK542_01360 JAKUZA010000012.1 Protein Homology CDS 27718 28695 . - 0 ID=cds-MCY7216824.1;Parent=gene-MK542_01360;Dbxref=NCBI_GP:MCY7216824.1;Name=MCY7216824.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902946.1;locus_tag=MK542_01360;product=phosphate acetyltransferase;protein_id=MCY7216824.1;transl_table=11 JAKUZA010000012.1 Genbank gene 28721 29608 . - . ID=gene-MK542_01365;Name=MK542_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01365 JAKUZA010000012.1 Protein Homology CDS 28721 29608 . - 0 ID=cds-MCY7216825.1;Parent=gene-MK542_01365;Dbxref=NCBI_GP:MCY7216825.1;Name=MCY7216825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924626.1;locus_tag=MK542_01365;product=RluA family pseudouridine synthase;protein_id=MCY7216825.1;transl_table=11 JAKUZA010000012.1 Genbank gene 29605 30423 . - . ID=gene-MK542_01370;Name=MK542_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01370 JAKUZA010000012.1 Protein Homology CDS 29605 30423 . - 0 ID=cds-MCY7216826.1;Parent=gene-MK542_01370;Dbxref=NCBI_GP:MCY7216826.1;Name=MCY7216826.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590379.1;locus_tag=MK542_01370;product=NAD kinase;protein_id=MCY7216826.1;transl_table=11 JAKUZA010000012.1 Genbank gene 30407 31078 . - . ID=gene-MK542_01375;Name=MK542_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01375 JAKUZA010000012.1 Protein Homology CDS 30407 31078 . - 0 ID=cds-MCY7216827.1;Parent=gene-MK542_01375;Dbxref=NCBI_GP:MCY7216827.1;Name=MCY7216827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933691.1;locus_tag=MK542_01375;product=GTP pyrophosphokinase family protein;protein_id=MCY7216827.1;transl_table=11 JAKUZA010000012.1 Genbank gene 31169 31744 . + . ID=gene-MK542_01380;Name=MK542_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01380 JAKUZA010000012.1 Protein Homology CDS 31169 31744 . + 0 ID=cds-MCY7216828.1;Parent=gene-MK542_01380;Dbxref=NCBI_GP:MCY7216828.1;Name=MCY7216828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371215.1;locus_tag=MK542_01380;product=CYTH domain-containing protein;protein_id=MCY7216828.1;transl_table=11 JAKUZA010000012.1 Genbank gene 31814 32770 . + . ID=gene-MK542_01385;Name=MK542_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01385 JAKUZA010000012.1 Protein Homology CDS 31814 32770 . + 0 ID=cds-MCY7216829.1;Parent=gene-MK542_01385;Dbxref=NCBI_GP:MCY7216829.1;Name=MCY7216829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836993.1;locus_tag=MK542_01385;product=ribose-phosphate diphosphokinase;protein_id=MCY7216829.1;transl_table=11 JAKUZA010000012.1 Genbank gene 32783 33895 . + . ID=gene-MK542_01390;Name=MK542_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01390 JAKUZA010000012.1 Protein Homology CDS 32783 33895 . + 0 ID=cds-MCY7216830.1;Parent=gene-MK542_01390;Dbxref=NCBI_GP:MCY7216830.1;Name=MCY7216830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024177.1;locus_tag=MK542_01390;product=cysteine desulfurase;protein_id=MCY7216830.1;transl_table=11 JAKUZA010000012.1 Genbank gene 33897 34244 . + . ID=gene-MK542_01395;Name=MK542_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01395 JAKUZA010000012.1 Protein Homology CDS 33897 34244 . + 0 ID=cds-MCY7216831.1;Parent=gene-MK542_01395;Dbxref=NCBI_GP:MCY7216831.1;Name=MCY7216831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906520.1;locus_tag=MK542_01395;product=DUF1831 domain-containing protein;protein_id=MCY7216831.1;transl_table=11 JAKUZA010000012.1 Genbank gene 34378 35025 . + . ID=gene-MK542_01400;Name=MK542_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01400 JAKUZA010000012.1 Protein Homology CDS 34378 35025 . + 0 ID=cds-MCY7216832.1;Parent=gene-MK542_01400;Dbxref=NCBI_GP:MCY7216832.1;Name=MCY7216832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915151.1;locus_tag=MK542_01400;product=redox-sensing transcriptional repressor Rex;protein_id=MCY7216832.1;transl_table=11 JAKUZA010000012.1 Genbank gene 35306 35989 . - . ID=gene-MK542_01405;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=MK542_01405 JAKUZA010000012.1 Protein Homology CDS 35306 35989 . - 0 ID=cds-MCY7216833.1;Parent=gene-MK542_01405;Dbxref=NCBI_GP:MCY7216833.1;Name=MCY7216833.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660453.1;locus_tag=MK542_01405;product=DNA repair protein RadC;protein_id=MCY7216833.1;transl_table=11 JAKUZA010000012.1 Genbank gene 36124 36438 . - . ID=gene-MK542_01410;Name=MK542_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01410 JAKUZA010000012.1 Protein Homology CDS 36124 36438 . - 0 ID=cds-MCY7216834.1;Parent=gene-MK542_01410;Dbxref=NCBI_GP:MCY7216834.1;Name=MCY7216834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605011.1;locus_tag=MK542_01410;product=hypothetical protein;protein_id=MCY7216834.1;transl_table=11 JAKUZA010000012.1 Genbank gene 36581 36868 . - . ID=gene-MK542_01415;Name=MK542_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01415 JAKUZA010000012.1 GeneMarkS-2+ CDS 36581 36868 . - 0 ID=cds-MCY7216835.1;Parent=gene-MK542_01415;Dbxref=NCBI_GP:MCY7216835.1;Name=MCY7216835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01415;product=hypothetical protein;protein_id=MCY7216835.1;transl_table=11 JAKUZA010000012.1 Genbank gene 36850 38256 . - . ID=gene-MK542_01420;Name=MK542_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01420 JAKUZA010000012.1 Protein Homology CDS 36850 38256 . - 0 ID=cds-MCY7216836.1;Parent=gene-MK542_01420;Dbxref=NCBI_GP:MCY7216836.1;Name=MCY7216836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915516.1;locus_tag=MK542_01420;product=lipase;protein_id=MCY7216836.1;transl_table=11 JAKUZA010000012.1 Genbank gene 38258 38674 . - . ID=gene-MK542_01425;Name=MK542_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01425 JAKUZA010000012.1 Protein Homology CDS 38258 38674 . - 0 ID=cds-MCY7216837.1;Parent=gene-MK542_01425;Dbxref=NCBI_GP:MCY7216837.1;Name=MCY7216837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915517.1;locus_tag=MK542_01425;product=ubiquitin carboxyl-hydrolase;protein_id=MCY7216837.1;transl_table=11 JAKUZA010000012.1 Genbank gene 38726 38923 . - . ID=gene-MK542_01430;Name=MK542_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01430 JAKUZA010000012.1 GeneMarkS-2+ CDS 38726 38923 . - 0 ID=cds-MCY7216838.1;Parent=gene-MK542_01430;Dbxref=NCBI_GP:MCY7216838.1;Name=MCY7216838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01430;product=hypothetical protein;protein_id=MCY7216838.1;transl_table=11 JAKUZA010000012.1 Genbank gene 38920 39111 . - . ID=gene-MK542_01435;Name=MK542_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01435 JAKUZA010000012.1 GeneMarkS-2+ CDS 38920 39111 . - 0 ID=cds-MCY7216839.1;Parent=gene-MK542_01435;Dbxref=NCBI_GP:MCY7216839.1;Name=MCY7216839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01435;product=hypothetical protein;protein_id=MCY7216839.1;transl_table=11 JAKUZA010000012.1 Genbank gene 39144 39311 . - . ID=gene-MK542_01440;Name=MK542_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01440 JAKUZA010000012.1 GeneMarkS-2+ CDS 39144 39311 . - 0 ID=cds-MCY7216840.1;Parent=gene-MK542_01440;Dbxref=NCBI_GP:MCY7216840.1;Name=MCY7216840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01440;product=hypothetical protein;protein_id=MCY7216840.1;transl_table=11 JAKUZA010000012.1 Genbank gene 39481 40227 . - . ID=gene-MK542_01445;Name=MK542_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01445 JAKUZA010000012.1 Protein Homology CDS 39481 40227 . - 0 ID=cds-MCY7216841.1;Parent=gene-MK542_01445;Dbxref=NCBI_GP:MCY7216841.1;Name=MCY7216841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596415.1;locus_tag=MK542_01445;product=class A sortase;protein_id=MCY7216841.1;transl_table=11 JAKUZA010000012.1 Genbank gene 40235 42691 . - . ID=gene-MK542_01450;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=MK542_01450 JAKUZA010000012.1 Protein Homology CDS 40235 42691 . - 0 ID=cds-MCY7216842.1;Parent=gene-MK542_01450;Dbxref=NCBI_GP:MCY7216842.1;Name=MCY7216842.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244540.1;locus_tag=MK542_01450;product=DNA gyrase subunit A;protein_id=MCY7216842.1;transl_table=11 JAKUZA010000012.1 Genbank gene 42902 43888 . + . ID=gene-MK542_01455;Name=MK542_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01455 JAKUZA010000012.1 Protein Homology CDS 42902 43888 . + 0 ID=cds-MCY7216843.1;Parent=gene-MK542_01455;Dbxref=NCBI_GP:MCY7216843.1;Name=MCY7216843.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768616.1;locus_tag=MK542_01455;product=L-lactate dehydrogenase;protein_id=MCY7216843.1;transl_table=11 JAKUZA010000012.1 Genbank gene 43957 44364 . - . ID=gene-MK542_01460;Name=MK542_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01460 JAKUZA010000012.1 Protein Homology CDS 43957 44364 . - 0 ID=cds-MCY7216844.1;Parent=gene-MK542_01460;Dbxref=NCBI_GP:MCY7216844.1;Name=MCY7216844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913541.1;locus_tag=MK542_01460;product=NUDIX hydrolase;protein_id=MCY7216844.1;transl_table=11 JAKUZA010000012.1 Genbank gene 44418 44489 . - . ID=gene-MK542_01465;Name=MK542_01465;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_01465 JAKUZA010000012.1 tRNAscan-SE tRNA 44418 44489 . - . ID=rna-MK542_01465;Parent=gene-MK542_01465;anticodon=(pos:complement(44454..44456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_01465;product=tRNA-Arg JAKUZA010000012.1 tRNAscan-SE exon 44418 44489 . - . ID=exon-MK542_01465-1;Parent=rna-MK542_01465;anticodon=(pos:complement(44454..44456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_01465;product=tRNA-Arg JAKUZA010000012.1 Genbank gene 44920 46134 . - . ID=gene-MK542_01470;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=MK542_01470 JAKUZA010000012.1 Protein Homology CDS 44920 46134 . - 0 ID=cds-MCY7216845.1;Parent=gene-MK542_01470;Dbxref=NCBI_GP:MCY7216845.1;Name=MCY7216845.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040041.1;locus_tag=MK542_01470;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=MCY7216845.1;transl_table=11 JAKUZA010000012.1 Genbank gene 46138 47280 . - . ID=gene-MK542_01475;Name=MK542_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01475 JAKUZA010000012.1 Protein Homology CDS 46138 47280 . - 0 ID=cds-MCY7216846.1;Parent=gene-MK542_01475;Dbxref=NCBI_GP:MCY7216846.1;Name=MCY7216846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543459.1;locus_tag=MK542_01475;product=cysteine desulfurase;protein_id=MCY7216846.1;transl_table=11 JAKUZA010000012.1 Genbank gene 47595 48407 . - . ID=gene-MK542_01480;Name=MK542_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01480 JAKUZA010000012.1 Protein Homology CDS 47595 48407 . - 0 ID=cds-MCY7216847.1;Parent=gene-MK542_01480;Dbxref=NCBI_GP:MCY7216847.1;Name=MCY7216847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660333.1;locus_tag=MK542_01480;product=kinase/pyrophosphorylase;protein_id=MCY7216847.1;transl_table=11 JAKUZA010000012.1 Genbank gene 48423 49052 . - . ID=gene-MK542_01485;Name=MK542_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01485 JAKUZA010000012.1 Protein Homology CDS 48423 49052 . - 0 ID=cds-MCY7216848.1;Parent=gene-MK542_01485;Dbxref=NCBI_GP:MCY7216848.1;Name=MCY7216848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912330.1;locus_tag=MK542_01485;product=CBS domain-containing protein;protein_id=MCY7216848.1;transl_table=11 JAKUZA010000012.1 Genbank gene 49299 51926 . + . ID=gene-MK542_01490;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=MK542_01490 JAKUZA010000012.1 Protein Homology CDS 49299 51926 . + 0 ID=cds-MCY7216849.1;Parent=gene-MK542_01490;Dbxref=NCBI_GP:MCY7216849.1;Name=MCY7216849.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754964.1;locus_tag=MK542_01490;product=pyruvate%2C phosphate dikinase;protein_id=MCY7216849.1;transl_table=11 JAKUZA010000012.1 Genbank gene 52156 52587 . + . ID=gene-MK542_01495;Name=MK542_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01495 JAKUZA010000012.1 Protein Homology CDS 52156 52587 . + 0 ID=cds-MCY7216850.1;Parent=gene-MK542_01495;Dbxref=NCBI_GP:MCY7216850.1;Name=MCY7216850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191431.1;locus_tag=MK542_01495;product=hypothetical protein;protein_id=MCY7216850.1;transl_table=11 JAKUZA010000012.1 Genbank gene 52643 53713 . - . ID=gene-MK542_01500;Name=MK542_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01500 JAKUZA010000012.1 Protein Homology CDS 52643 53713 . - 0 ID=cds-MCY7216851.1;Parent=gene-MK542_01500;Dbxref=NCBI_GP:MCY7216851.1;Name=MCY7216851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725675.1;locus_tag=MK542_01500;product=ABC transporter substrate-binding protein;protein_id=MCY7216851.1;transl_table=11 JAKUZA010000012.1 Genbank gene 53710 54483 . - . ID=gene-MK542_01505;Name=MK542_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01505 JAKUZA010000012.1 Protein Homology CDS 53710 54483 . - 0 ID=cds-MCY7216852.1;Parent=gene-MK542_01505;Dbxref=NCBI_GP:MCY7216852.1;Name=MCY7216852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027519.1;locus_tag=MK542_01505;product=ABC transporter permease;protein_id=MCY7216852.1;transl_table=11 JAKUZA010000012.1 Genbank gene 54480 55286 . - . ID=gene-MK542_01510;Name=MK542_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01510 JAKUZA010000012.1 Protein Homology CDS 54480 55286 . - 0 ID=cds-MCY7216853.1;Parent=gene-MK542_01510;Dbxref=NCBI_GP:MCY7216853.1;Name=MCY7216853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895634.1;locus_tag=MK542_01510;product=ABC transporter permease;protein_id=MCY7216853.1;transl_table=11 JAKUZA010000012.1 Genbank gene 55267 56424 . - . ID=gene-MK542_01515;Name=MK542_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01515 JAKUZA010000012.1 Protein Homology CDS 55267 56424 . - 0 ID=cds-MCY7216854.1;Parent=gene-MK542_01515;Dbxref=NCBI_GP:MCY7216854.1;Name=MCY7216854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372333.1;locus_tag=MK542_01515;product=ABC transporter ATP-binding protein;protein_id=MCY7216854.1;transl_table=11 JAKUZA010000012.1 Genbank gene 56642 57547 . - . ID=gene-MK542_01520;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=MK542_01520 JAKUZA010000012.1 Protein Homology CDS 56642 57547 . - 0 ID=cds-MCY7216855.1;Parent=gene-MK542_01520;Dbxref=NCBI_GP:MCY7216855.1;Name=MCY7216855.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660283.1;locus_tag=MK542_01520;product=UDP-N-acetylmuramate dehydrogenase;protein_id=MCY7216855.1;transl_table=11 JAKUZA010000012.1 Genbank gene 57743 58732 . - . ID=gene-MK542_01525;Name=MK542_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01525 JAKUZA010000012.1 Protein Homology CDS 57743 58732 . - 0 ID=cds-MCY7216856.1;Parent=gene-MK542_01525;Dbxref=NCBI_GP:MCY7216856.1;Name=MCY7216856.1;Ontology_term=GO:0006464,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873976.1;locus_tag=MK542_01525;product=lipoate--protein ligase;protein_id=MCY7216856.1;transl_table=11 JAKUZA010000012.1 Genbank gene 58747 60450 . - . ID=gene-MK542_01530;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=MK542_01530 JAKUZA010000012.1 Protein Homology CDS 58747 60450 . - 0 ID=cds-MCY7216857.1;Parent=gene-MK542_01530;Dbxref=NCBI_GP:MCY7216857.1;Name=MCY7216857.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003001382.1;locus_tag=MK542_01530;product=dihydrolipoyl dehydrogenase;protein_id=MCY7216857.1;transl_table=11 JAKUZA010000012.1 Genbank gene 60528 61571 . - . ID=gene-MK542_01535;Name=MK542_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01535 JAKUZA010000012.1 Protein Homology CDS 60528 61571 . - 0 ID=cds-MCY7216858.1;Parent=gene-MK542_01535;Dbxref=NCBI_GP:MCY7216858.1;Name=MCY7216858.1;Ontology_term=GO:0006086,GO:0016746,GO:0045254;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808675.1;locus_tag=MK542_01535;product=dihydrolipoamide acetyltransferase;protein_id=MCY7216858.1;transl_table=11 JAKUZA010000012.1 Genbank gene 61699 62691 . - . ID=gene-MK542_01540;Name=MK542_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01540 JAKUZA010000012.1 Protein Homology CDS 61699 62691 . - 0 ID=cds-MCY7216859.1;Parent=gene-MK542_01540;Dbxref=NCBI_GP:MCY7216859.1;Name=MCY7216859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000448722.1;locus_tag=MK542_01540;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=MCY7216859.1;transl_table=11 JAKUZA010000012.1 Genbank gene 62710 63678 . - . ID=gene-MK542_01545;Name=MK542_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01545 JAKUZA010000012.1 Protein Homology CDS 62710 63678 . - 0 ID=cds-MCY7216860.1;Parent=gene-MK542_01545;Dbxref=NCBI_GP:MCY7216860.1;Name=MCY7216860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844850.1;locus_tag=MK542_01545;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=MCY7216860.1;transl_table=11 JAKUZA010000012.1 Genbank gene 63899 64303 . - . ID=gene-MK542_01550;Name=MK542_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01550 JAKUZA010000012.1 GeneMarkS-2+ CDS 63899 64303 . - 0 ID=cds-MCY7216861.1;Parent=gene-MK542_01550;Dbxref=NCBI_GP:MCY7216861.1;Name=MCY7216861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01550;product=hypothetical protein;protein_id=MCY7216861.1;transl_table=11 JAKUZA010000012.1 Genbank gene 64489 65667 . - . ID=gene-MK542_01555;Name=MK542_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01555 JAKUZA010000012.1 Protein Homology CDS 64489 65667 . - 0 ID=cds-MCY7216862.1;Parent=gene-MK542_01555;Dbxref=NCBI_GP:MCY7216862.1;Name=MCY7216862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906567.1;locus_tag=MK542_01555;product=carbamoyl phosphate synthase large subunit;protein_id=MCY7216862.1;transl_table=11 JAKUZA010000012.1 Genbank gene 65695 66435 . - . ID=gene-MK542_01560;Name=MK542_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01560 JAKUZA010000012.1 Protein Homology CDS 65695 66435 . - 0 ID=cds-MCY7216863.1;Parent=gene-MK542_01560;Dbxref=NCBI_GP:MCY7216863.1;Name=MCY7216863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909732.1;locus_tag=MK542_01560;product=alpha/beta hydrolase-fold protein;protein_id=MCY7216863.1;transl_table=11 JAKUZA010000012.1 Genbank gene 66462 67286 . - . ID=gene-MK542_01565;Name=MK542_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01565 JAKUZA010000012.1 Protein Homology CDS 66462 67286 . - 0 ID=cds-MCY7216864.1;Parent=gene-MK542_01565;Dbxref=NCBI_GP:MCY7216864.1;Name=MCY7216864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897562.1;locus_tag=MK542_01565;product=alpha/beta hydrolase;protein_id=MCY7216864.1;transl_table=11 JAKUZA010000012.1 Genbank gene 67394 68728 . - . ID=gene-MK542_01570;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=MK542_01570 JAKUZA010000012.1 Protein Homology CDS 67394 68728 . - 0 ID=cds-MCY7216865.1;Parent=gene-MK542_01570;Dbxref=NCBI_GP:MCY7216865.1;Name=MCY7216865.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836971.1;locus_tag=MK542_01570;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=MCY7216865.1;transl_table=11 JAKUZA010000012.1 Genbank gene 68822 69316 . - . ID=gene-MK542_01575;Name=MK542_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01575 JAKUZA010000012.1 Protein Homology CDS 68822 69316 . - 0 ID=cds-MCY7216866.1;Parent=gene-MK542_01575;Dbxref=NCBI_GP:MCY7216866.1;Name=MCY7216866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895485.1;locus_tag=MK542_01575;product=phosphoribosylanthranilate isomerase;protein_id=MCY7216866.1;transl_table=11 JAKUZA010000012.1 Genbank gene 69358 71451 . - . ID=gene-MK542_01580;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=MK542_01580 JAKUZA010000012.1 Protein Homology CDS 69358 71451 . - 0 ID=cds-MCY7216867.1;Parent=gene-MK542_01580;Dbxref=NCBI_GP:MCY7216867.1;Name=MCY7216867.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836973.1;locus_tag=MK542_01580;product=type I DNA topoisomerase;protein_id=MCY7216867.1;transl_table=11 JAKUZA010000012.1 Genbank gene 71537 72379 . - . ID=gene-MK542_01585;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=MK542_01585 JAKUZA010000012.1 Protein Homology CDS 71537 72379 . - 0 ID=cds-MCY7216868.1;Parent=gene-MK542_01585;Dbxref=NCBI_GP:MCY7216868.1;Name=MCY7216868.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191280.1;locus_tag=MK542_01585;product=DNA-processing protein DprA;protein_id=MCY7216868.1;transl_table=11 JAKUZA010000012.1 Genbank gene 72614 73186 . - . ID=gene-MK542_01590;Name=MK542_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01590 JAKUZA010000012.1 Protein Homology CDS 72614 73186 . - 0 ID=cds-MCY7216869.1;Parent=gene-MK542_01590;Dbxref=NCBI_GP:MCY7216869.1;Name=MCY7216869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904502.1;locus_tag=MK542_01590;product=sugar O-acetyltransferase;protein_id=MCY7216869.1;transl_table=11 JAKUZA010000012.1 Genbank gene 73189 74004 . - . ID=gene-MK542_01595;Name=MK542_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01595 JAKUZA010000012.1 Protein Homology CDS 73189 74004 . - 0 ID=cds-MCY7216870.1;Parent=gene-MK542_01595;Dbxref=NCBI_GP:MCY7216870.1;Name=MCY7216870.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836975.1;locus_tag=MK542_01595;product=PRD domain-containing protein;protein_id=MCY7216870.1;transl_table=11 JAKUZA010000012.1 Genbank gene 74028 74795 . - . ID=gene-MK542_01600;Name=MK542_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01600 JAKUZA010000012.1 Protein Homology CDS 74028 74795 . - 0 ID=cds-MCY7216871.1;Parent=gene-MK542_01600;Dbxref=NCBI_GP:MCY7216871.1;Name=MCY7216871.1;Ontology_term=GO:0004523;gbkey=CDS;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201107.1;locus_tag=MK542_01600;product=ribonuclease HII;protein_id=MCY7216871.1;transl_table=11 JAKUZA010000012.1 Genbank gene 74782 75633 . - . ID=gene-MK542_01605;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=MK542_01605 JAKUZA010000012.1 Protein Homology CDS 74782 75633 . - 0 ID=cds-MCY7216872.1;Parent=gene-MK542_01605;Dbxref=NCBI_GP:MCY7216872.1;Name=MCY7216872.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069058.1;locus_tag=MK542_01605;product=ribosome biogenesis GTPase YlqF;protein_id=MCY7216872.1;transl_table=11 JAKUZA010000012.1 Genbank gene 75756 75947 . + . ID=gene-MK542_01610;Name=MK542_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01610 JAKUZA010000012.1 GeneMarkS-2+ CDS 75756 75947 . + 0 ID=cds-MCY7216873.1;Parent=gene-MK542_01610;Dbxref=NCBI_GP:MCY7216873.1;Name=MCY7216873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01610;product=hypothetical protein;protein_id=MCY7216873.1;transl_table=11 ##sequence-region JAKUZA010000013.1 1 5796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000013.1 Genbank region 1 5796 . + . ID=JAKUZA010000013.1:1..5796;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000013.1 Genbank gene 633 1352 . - . ID=gene-MK542_01615;Name=MK542_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01615 JAKUZA010000013.1 Protein Homology CDS 633 1352 . - 0 ID=cds-MCY7216874.1;Parent=gene-MK542_01615;Dbxref=NCBI_GP:MCY7216874.1;Name=MCY7216874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808392.1;locus_tag=MK542_01615;product=ABC transporter permease;protein_id=MCY7216874.1;transl_table=11 JAKUZA010000013.1 Genbank gene 1345 2025 . - . ID=gene-MK542_01620;Name=MK542_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01620 JAKUZA010000013.1 Protein Homology CDS 1345 2025 . - 0 ID=cds-MCY7216875.1;Parent=gene-MK542_01620;Dbxref=NCBI_GP:MCY7216875.1;Name=MCY7216875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808391.1;locus_tag=MK542_01620;product=ABC transporter ATP-binding protein;protein_id=MCY7216875.1;transl_table=11 JAKUZA010000013.1 Genbank gene 2082 2540 . - . ID=gene-MK542_01625;Name=MK542_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01625 JAKUZA010000013.1 GeneMarkS-2+ CDS 2082 2540 . - 0 ID=cds-MCY7216876.1;Parent=gene-MK542_01625;Dbxref=NCBI_GP:MCY7216876.1;Name=MCY7216876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01625;product=hypothetical protein;protein_id=MCY7216876.1;transl_table=11 JAKUZA010000013.1 Genbank gene 2725 4053 . - . ID=gene-MK542_01630;Name=MK542_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01630 JAKUZA010000013.1 Protein Homology CDS 2725 4053 . - 0 ID=cds-MCY7216877.1;Parent=gene-MK542_01630;Dbxref=NCBI_GP:MCY7216877.1;Name=MCY7216877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025854.2;locus_tag=MK542_01630;product=GHKL domain-containing protein;protein_id=MCY7216877.1;transl_table=11 JAKUZA010000013.1 Genbank gene 4066 4800 . - . ID=gene-MK542_01635;Name=MK542_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01635 JAKUZA010000013.1 Protein Homology CDS 4066 4800 . - 0 ID=cds-MCY7216878.1;Parent=gene-MK542_01635;Dbxref=NCBI_GP:MCY7216878.1;Name=MCY7216878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999888.1;locus_tag=MK542_01635;product=LytTR family DNA-binding domain-containing protein;protein_id=MCY7216878.1;transl_table=11 JAKUZA010000013.1 Genbank pseudogene 5483 5613 . + . ID=gene-MK542_01640;Name=MK542_01640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_01640;pseudo=true JAKUZA010000013.1 Protein Homology CDS 5483 5613 . + 0 ID=cds-MK542_01640;Parent=gene-MK542_01640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621054.1;locus_tag=MK542_01640;product=site-specific integrase;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000014.1 1 164544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000014.1 Genbank region 1 164544 . + . ID=JAKUZA010000014.1:1..164544;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000014.1 Genbank gene 269 1399 . - . ID=gene-MK542_01645;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=MK542_01645 JAKUZA010000014.1 Protein Homology CDS 269 1399 . - 0 ID=cds-MCY7216879.1;Parent=gene-MK542_01645;Dbxref=NCBI_GP:MCY7216879.1;Name=MCY7216879.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010064.1;locus_tag=MK542_01645;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MCY7216879.1;transl_table=11 JAKUZA010000014.1 Genbank gene 1814 2440 . + . ID=gene-MK542_01650;Name=MK542_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01650 JAKUZA010000014.1 Protein Homology CDS 1814 2440 . + 0 ID=cds-MCY7216880.1;Parent=gene-MK542_01650;Dbxref=NCBI_GP:MCY7216880.1;Name=MCY7216880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901034.1;locus_tag=MK542_01650;product=TVP38/TMEM64 family protein;protein_id=MCY7216880.1;transl_table=11 JAKUZA010000014.1 Genbank gene 2555 3466 . - . ID=gene-MK542_01655;Name=MK542_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01655 JAKUZA010000014.1 Protein Homology CDS 2555 3466 . - 0 ID=cds-MCY7216881.1;Parent=gene-MK542_01655;Dbxref=NCBI_GP:MCY7216881.1;Name=MCY7216881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270219.1;locus_tag=MK542_01655;product=DMT family transporter;protein_id=MCY7216881.1;transl_table=11 JAKUZA010000014.1 Genbank gene 3554 4393 . - . ID=gene-MK542_01660;Name=MK542_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01660 JAKUZA010000014.1 Protein Homology CDS 3554 4393 . - 0 ID=cds-MCY7216882.1;Parent=gene-MK542_01660;Dbxref=NCBI_GP:MCY7216882.1;Name=MCY7216882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015998.2;locus_tag=MK542_01660;product=class I SAM-dependent methyltransferase;protein_id=MCY7216882.1;transl_table=11 JAKUZA010000014.1 Genbank gene 4691 4930 . - . ID=gene-MK542_01665;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=MK542_01665 JAKUZA010000014.1 Protein Homology CDS 4691 4930 . - 0 ID=cds-MCY7216883.1;Parent=gene-MK542_01665;Dbxref=NCBI_GP:MCY7216883.1;Name=MCY7216883.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=MK542_01665;product=30S ribosomal protein S18;protein_id=MCY7216883.1;transl_table=11 JAKUZA010000014.1 Genbank gene 4963 5460 . - . ID=gene-MK542_01670;Name=MK542_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01670 JAKUZA010000014.1 Protein Homology CDS 4963 5460 . - 0 ID=cds-MCY7216884.1;Parent=gene-MK542_01670;Dbxref=NCBI_GP:MCY7216884.1;Name=MCY7216884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609607.1;locus_tag=MK542_01670;product=single-stranded DNA-binding protein;protein_id=MCY7216884.1;transl_table=11 JAKUZA010000014.1 Genbank gene 5473 5763 . - . ID=gene-MK542_01675;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=MK542_01675 JAKUZA010000014.1 Protein Homology CDS 5473 5763 . - 0 ID=cds-MCY7216885.1;Parent=gene-MK542_01675;Dbxref=NCBI_GP:MCY7216885.1;Name=MCY7216885.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030687.1;locus_tag=MK542_01675;product=30S ribosomal protein S6;protein_id=MCY7216885.1;transl_table=11 JAKUZA010000014.1 Genbank gene 5942 7207 . - . ID=gene-MK542_01680;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=MK542_01680 JAKUZA010000014.1 Protein Homology CDS 5942 7207 . - 0 ID=cds-MCY7216886.1;Parent=gene-MK542_01680;Dbxref=NCBI_GP:MCY7216886.1;Name=MCY7216886.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809789.1;locus_tag=MK542_01680;product=imidazolonepropionase;protein_id=MCY7216886.1;transl_table=11 JAKUZA010000014.1 Genbank gene 7407 9437 . + . ID=gene-MK542_01685;Name=MK542_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01685 JAKUZA010000014.1 Protein Homology CDS 7407 9437 . + 0 ID=cds-MCY7216887.1;Parent=gene-MK542_01685;Dbxref=NCBI_GP:MCY7216887.1;Name=MCY7216887.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914331.1;locus_tag=MK542_01685;product=urocanate hydratase;protein_id=MCY7216887.1;transl_table=11 JAKUZA010000014.1 Genbank gene 9555 10454 . + . ID=gene-MK542_01690;Name=ftcD;gbkey=Gene;gene=ftcD;gene_biotype=protein_coding;locus_tag=MK542_01690 JAKUZA010000014.1 Protein Homology CDS 9555 10454 . + 0 ID=cds-MCY7216888.1;Parent=gene-MK542_01690;Dbxref=NCBI_GP:MCY7216888.1;Name=MCY7216888.1;Ontology_term=GO:0019556,GO:0030409,GO:0030412;gbkey=CDS;gene=ftcD;go_function=glutamate formimidoyltransferase activity|0030409||IEA,formimidoyltetrahydrofolate cyclodeaminase activity|0030412||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003005485.1;locus_tag=MK542_01690;product=glutamate formimidoyltransferase;protein_id=MCY7216888.1;transl_table=11 JAKUZA010000014.1 Genbank gene 10469 11095 . + . ID=gene-MK542_01695;Name=MK542_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01695 JAKUZA010000014.1 Protein Homology CDS 10469 11095 . + 0 ID=cds-MCY7216889.1;Parent=gene-MK542_01695;Dbxref=NCBI_GP:MCY7216889.1;Name=MCY7216889.1;Ontology_term=GO:0044237;gbkey=CDS;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896501.1;locus_tag=MK542_01695;product=cyclodeaminase/cyclohydrolase family protein;protein_id=MCY7216889.1;transl_table=11 JAKUZA010000014.1 Genbank gene 11162 12835 . + . ID=gene-MK542_01700;Name=MK542_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01700 JAKUZA010000014.1 Protein Homology CDS 11162 12835 . + 0 ID=cds-MCY7216890.1;Parent=gene-MK542_01700;Dbxref=NCBI_GP:MCY7216890.1;Name=MCY7216890.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002982280.1;locus_tag=MK542_01700;product=formate--tetrahydrofolate ligase;protein_id=MCY7216890.1;transl_table=11 JAKUZA010000014.1 Genbank gene 12848 13447 . + . ID=gene-MK542_01705;Name=MK542_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01705 JAKUZA010000014.1 Protein Homology CDS 12848 13447 . + 0 ID=cds-MCY7216891.1;Parent=gene-MK542_01705;Dbxref=NCBI_GP:MCY7216891.1;Name=MCY7216891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836508.1;locus_tag=MK542_01705;product=HutD family protein;protein_id=MCY7216891.1;transl_table=11 JAKUZA010000014.1 Genbank gene 13531 14871 . + . ID=gene-MK542_01710;Name=MK542_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01710 JAKUZA010000014.1 Protein Homology CDS 13531 14871 . + 0 ID=cds-MCY7216892.1;Parent=gene-MK542_01710;Dbxref=NCBI_GP:MCY7216892.1;Name=MCY7216892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929289.1;locus_tag=MK542_01710;product=APC family permease;protein_id=MCY7216892.1;transl_table=11 JAKUZA010000014.1 Genbank gene 14907 16448 . + . ID=gene-MK542_01715;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=MK542_01715 JAKUZA010000014.1 Protein Homology CDS 14907 16448 . + 0 ID=cds-MCY7216893.1;Parent=gene-MK542_01715;Dbxref=NCBI_GP:MCY7216893.1;Name=MCY7216893.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130845.1;locus_tag=MK542_01715;product=histidine ammonia-lyase;protein_id=MCY7216893.1;transl_table=11 JAKUZA010000014.1 Genbank gene 16573 17580 . + . ID=gene-MK542_01720;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=MK542_01720 JAKUZA010000014.1 Protein Homology CDS 16573 17580 . + 0 ID=cds-MCY7216894.1;Parent=gene-MK542_01720;Dbxref=NCBI_GP:MCY7216894.1;Name=MCY7216894.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896506.1;locus_tag=MK542_01720;product=formimidoylglutamase;protein_id=MCY7216894.1;transl_table=11 JAKUZA010000014.1 Genbank gene 17636 20689 . - . ID=gene-MK542_01725;Name=MK542_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01725 JAKUZA010000014.1 Protein Homology CDS 17636 20689 . - 0 ID=cds-MCY7216895.1;Parent=gene-MK542_01725;Dbxref=NCBI_GP:MCY7216895.1;Name=MCY7216895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896507.1;locus_tag=MK542_01725;product=AAA family ATPase;protein_id=MCY7216895.1;transl_table=11 JAKUZA010000014.1 Genbank gene 21083 22132 . + . ID=gene-MK542_01730;Name=MK542_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01730 JAKUZA010000014.1 Protein Homology CDS 21083 22132 . + 0 ID=cds-MCY7216896.1;Parent=gene-MK542_01730;Dbxref=NCBI_GP:MCY7216896.1;Name=MCY7216896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918104.1;locus_tag=MK542_01730;product=bifunctional glycosyltransferase family 2/GtrA family protein;protein_id=MCY7216896.1;transl_table=11 JAKUZA010000014.1 Genbank gene 22129 23040 . + . ID=gene-MK542_01735;Name=MK542_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01735 JAKUZA010000014.1 Protein Homology CDS 22129 23040 . + 0 ID=cds-MCY7216897.1;Parent=gene-MK542_01735;Dbxref=NCBI_GP:MCY7216897.1;Name=MCY7216897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918105.1;locus_tag=MK542_01735;product=phosphodiester glycosidase family protein;protein_id=MCY7216897.1;transl_table=11 JAKUZA010000014.1 Genbank gene 23021 23494 . + . ID=gene-MK542_01740;Name=MK542_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01740 JAKUZA010000014.1 Protein Homology CDS 23021 23494 . + 0 ID=cds-MCY7216898.1;Parent=gene-MK542_01740;Dbxref=NCBI_GP:MCY7216898.1;Name=MCY7216898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910605.1;locus_tag=MK542_01740;product=hypothetical protein;protein_id=MCY7216898.1;transl_table=11 JAKUZA010000014.1 Genbank gene 23588 24190 . - . ID=gene-MK542_01745;Name=MK542_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01745 JAKUZA010000014.1 Protein Homology CDS 23588 24190 . - 0 ID=cds-MCY7216899.1;Parent=gene-MK542_01745;Dbxref=NCBI_GP:MCY7216899.1;Name=MCY7216899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836503.1;locus_tag=MK542_01745;product=histidine phosphatase family protein;protein_id=MCY7216899.1;transl_table=11 JAKUZA010000014.1 Genbank gene 24187 24783 . - . ID=gene-MK542_01750;Name=MK542_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01750 JAKUZA010000014.1 Protein Homology CDS 24187 24783 . - 0 ID=cds-MCY7216900.1;Parent=gene-MK542_01750;Dbxref=NCBI_GP:MCY7216900.1;Name=MCY7216900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898317.1;locus_tag=MK542_01750;product=histidine phosphatase family protein;protein_id=MCY7216900.1;transl_table=11 JAKUZA010000014.1 Genbank gene 24795 25658 . - . ID=gene-MK542_01755;Name=MK542_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01755 JAKUZA010000014.1 Protein Homology CDS 24795 25658 . - 0 ID=cds-MCY7216901.1;Parent=gene-MK542_01755;Dbxref=NCBI_GP:MCY7216901.1;Name=MCY7216901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898318.1;locus_tag=MK542_01755;product=HAD family hydrolase;protein_id=MCY7216901.1;transl_table=11 JAKUZA010000014.1 Genbank gene 25901 28138 . - . ID=gene-MK542_01760;Name=MK542_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01760 JAKUZA010000014.1 Protein Homology CDS 25901 28138 . - 0 ID=cds-MCY7216902.1;Parent=gene-MK542_01760;Dbxref=NCBI_GP:MCY7216902.1;Name=MCY7216902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901418.1;locus_tag=MK542_01760;product=alpha-galactosidase;protein_id=MCY7216902.1;transl_table=11 JAKUZA010000014.1 Genbank gene 28247 29095 . - . ID=gene-MK542_01765;Name=MK542_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01765 JAKUZA010000014.1 Protein Homology CDS 28247 29095 . - 0 ID=cds-MCY7216903.1;Parent=gene-MK542_01765;Dbxref=NCBI_GP:MCY7216903.1;Name=MCY7216903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926700.1;locus_tag=MK542_01765;product=AraC family transcriptional regulator;protein_id=MCY7216903.1;transl_table=11 JAKUZA010000014.1 Genbank gene 29220 30203 . + . ID=gene-MK542_01770;Name=MK542_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01770 JAKUZA010000014.1 Protein Homology CDS 29220 30203 . + 0 ID=cds-MCY7216904.1;Parent=gene-MK542_01770;Dbxref=NCBI_GP:MCY7216904.1;Name=MCY7216904.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886406.1;locus_tag=MK542_01770;product=IS30 family transposase;protein_id=MCY7216904.1;transl_table=11 JAKUZA010000014.1 Genbank gene 30277 31155 . - . ID=gene-MK542_01775;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=MK542_01775 JAKUZA010000014.1 Protein Homology CDS 30277 31155 . - 0 ID=cds-MCY7216905.1;Parent=gene-MK542_01775;Dbxref=NCBI_GP:MCY7216905.1;Name=MCY7216905.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659656.1;locus_tag=MK542_01775;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=MCY7216905.1;transl_table=11 JAKUZA010000014.1 Genbank gene 31295 33547 . - . ID=gene-MK542_01780;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=MK542_01780 JAKUZA010000014.1 Protein Homology CDS 31295 33547 . - 0 ID=cds-MCY7216906.1;Parent=gene-MK542_01780;Dbxref=NCBI_GP:MCY7216906.1;Name=MCY7216906.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003074544.1;locus_tag=MK542_01780;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=MCY7216906.1;transl_table=11 JAKUZA010000014.1 Genbank gene 33877 34875 . - . ID=gene-MK542_01785;Name=MK542_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01785 JAKUZA010000014.1 GeneMarkS-2+ CDS 33877 34875 . - 0 ID=cds-MCY7216907.1;Parent=gene-MK542_01785;Dbxref=NCBI_GP:MCY7216907.1;Name=MCY7216907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01785;product=hypothetical protein;protein_id=MCY7216907.1;transl_table=11 JAKUZA010000014.1 Genbank gene 34875 35285 . - . ID=gene-MK542_01790;Name=MK542_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01790 JAKUZA010000014.1 GeneMarkS-2+ CDS 34875 35285 . - 0 ID=cds-MCY7216908.1;Parent=gene-MK542_01790;Dbxref=NCBI_GP:MCY7216908.1;Name=MCY7216908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01790;product=hypothetical protein;protein_id=MCY7216908.1;transl_table=11 JAKUZA010000014.1 Genbank gene 35275 36258 . - . ID=gene-MK542_01795;Name=MK542_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01795 JAKUZA010000014.1 Protein Homology CDS 35275 36258 . - 0 ID=cds-MCY7216909.1;Parent=gene-MK542_01795;Dbxref=NCBI_GP:MCY7216909.1;Name=MCY7216909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816352.1;locus_tag=MK542_01795;product=hypothetical protein;protein_id=MCY7216909.1;transl_table=11 JAKUZA010000014.1 Genbank gene 36270 36581 . - . ID=gene-MK542_01800;Name=MK542_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01800 JAKUZA010000014.1 GeneMarkS-2+ CDS 36270 36581 . - 0 ID=cds-MCY7216910.1;Parent=gene-MK542_01800;Dbxref=NCBI_GP:MCY7216910.1;Name=MCY7216910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_01800;product=hypothetical protein;protein_id=MCY7216910.1;transl_table=11 JAKUZA010000014.1 Genbank gene 36578 37564 . - . ID=gene-MK542_01805;Name=MK542_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01805 JAKUZA010000014.1 Protein Homology CDS 36578 37564 . - 0 ID=cds-MCY7216911.1;Parent=gene-MK542_01805;Dbxref=NCBI_GP:MCY7216911.1;Name=MCY7216911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041882.1;locus_tag=MK542_01805;product=hypothetical protein;protein_id=MCY7216911.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 37846 38452 . - . ID=gene-MK542_01810;Name=MK542_01810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_01810;pseudo=true JAKUZA010000014.1 Protein Homology CDS 37846 38452 . - 0 ID=cds-MK542_01810;Parent=gene-MK542_01810;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152736.1;locus_tag=MK542_01810;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 38666 40387 . + . ID=gene-MK542_01815;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=MK542_01815 JAKUZA010000014.1 Protein Homology CDS 38666 40387 . + 0 ID=cds-MCY7216912.1;Parent=gene-MK542_01815;Dbxref=NCBI_GP:MCY7216912.1;Name=MCY7216912.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=para-aminobenzoic acid biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591218.1;locus_tag=MK542_01815;product=aminodeoxychorismate synthase component I;protein_id=MCY7216912.1;transl_table=11 JAKUZA010000014.1 Genbank gene 40568 41497 . + . ID=gene-MK542_01820;Name=MK542_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01820 JAKUZA010000014.1 Protein Homology CDS 40568 41497 . + 0 ID=cds-MCY7216913.1;Parent=gene-MK542_01820;Dbxref=NCBI_GP:MCY7216913.1;Name=MCY7216913.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592455.1;locus_tag=MK542_01820;product=ATP-binding cassette domain-containing protein;protein_id=MCY7216913.1;transl_table=11 JAKUZA010000014.1 Genbank gene 41494 42258 . + . ID=gene-MK542_01825;Name=MK542_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01825 JAKUZA010000014.1 Protein Homology CDS 41494 42258 . + 0 ID=cds-MCY7216914.1;Parent=gene-MK542_01825;Dbxref=NCBI_GP:MCY7216914.1;Name=MCY7216914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591220.1;locus_tag=MK542_01825;product=lantibiotic ABC transporter permease;protein_id=MCY7216914.1;transl_table=11 JAKUZA010000014.1 Genbank gene 42300 43175 . - . ID=gene-MK542_01830;Name=MK542_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01830 JAKUZA010000014.1 Protein Homology CDS 42300 43175 . - 0 ID=cds-MCY7216915.1;Parent=gene-MK542_01830;Dbxref=NCBI_GP:MCY7216915.1;Name=MCY7216915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604337.1;locus_tag=MK542_01830;product=HAMP domain-containing histidine kinase;protein_id=MCY7216915.1;transl_table=11 JAKUZA010000014.1 Genbank gene 43178 43858 . - . ID=gene-MK542_01835;Name=MK542_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01835 JAKUZA010000014.1 Protein Homology CDS 43178 43858 . - 0 ID=cds-MCY7216916.1;Parent=gene-MK542_01835;Dbxref=NCBI_GP:MCY7216916.1;Name=MCY7216916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896543.1;locus_tag=MK542_01835;product=response regulator transcription factor;protein_id=MCY7216916.1;transl_table=11 JAKUZA010000014.1 Genbank gene 43971 45410 . - . ID=gene-MK542_01840;Name=MK542_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01840 JAKUZA010000014.1 Protein Homology CDS 43971 45410 . - 0 ID=cds-MCY7216917.1;Parent=gene-MK542_01840;Dbxref=NCBI_GP:MCY7216917.1;Name=MCY7216917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926725.1;locus_tag=MK542_01840;product=6-phospho-beta-glucosidase;protein_id=MCY7216917.1;transl_table=11 JAKUZA010000014.1 Genbank gene 45621 45881 . - . ID=gene-MK542_01845;Name=MK542_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01845 JAKUZA010000014.1 Protein Homology CDS 45621 45881 . - 0 ID=cds-MCY7216918.1;Parent=gene-MK542_01845;Dbxref=NCBI_GP:MCY7216918.1;Name=MCY7216918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261618.1;locus_tag=MK542_01845;product=SWEET family sugar transporter;protein_id=MCY7216918.1;transl_table=11 JAKUZA010000014.1 Genbank gene 46249 48024 . - . ID=gene-MK542_01850;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=MK542_01850 JAKUZA010000014.1 Protein Homology CDS 46249 48024 . - 0 ID=cds-MCY7216919.1;Parent=gene-MK542_01850;Dbxref=NCBI_GP:MCY7216919.1;Name=MCY7216919.1;Ontology_term=GO:0009444,GO:0047112;gbkey=CDS;gene=spxB;go_function=pyruvate oxidase activity|0047112||IEA;go_process=pyruvate oxidation|0009444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191798.1;locus_tag=MK542_01850;product=pyruvate oxidase;protein_id=MCY7216919.1;transl_table=11 JAKUZA010000014.1 Genbank gene 48371 48808 . + . ID=gene-MK542_01855;Name=MK542_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01855 JAKUZA010000014.1 Protein Homology CDS 48371 48808 . + 0 ID=cds-MCY7216920.1;Parent=gene-MK542_01855;Dbxref=NCBI_GP:MCY7216920.1;Name=MCY7216920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604334.1;locus_tag=MK542_01855;product=GNAT family N-acetyltransferase;protein_id=MCY7216920.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 48884 51010 . - . ID=gene-MK542_01860;Name=MK542_01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_01860;pseudo=true JAKUZA010000014.1 Protein Homology CDS 48884 51010 . - 0 ID=cds-MK542_01860;Parent=gene-MK542_01860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037692.1;locus_tag=MK542_01860;product=GBS Bsp-like repeat-containing protein;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 51208 51840 . - . ID=gene-MK542_01865;Name=MK542_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01865 JAKUZA010000014.1 Protein Homology CDS 51208 51840 . - 0 ID=cds-MCY7216921.1;Parent=gene-MK542_01865;Dbxref=NCBI_GP:MCY7216921.1;Name=MCY7216921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911190.1;locus_tag=MK542_01865;product=GDSL-type esterase/lipase family protein;protein_id=MCY7216921.1;transl_table=11 JAKUZA010000014.1 Genbank gene 51841 52668 . - . ID=gene-MK542_01870;Name=MK542_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01870 JAKUZA010000014.1 Protein Homology CDS 51841 52668 . - 0 ID=cds-MCY7216922.1;Parent=gene-MK542_01870;Dbxref=NCBI_GP:MCY7216922.1;Name=MCY7216922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591230.1;locus_tag=MK542_01870;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7216922.1;transl_table=11 JAKUZA010000014.1 Genbank gene 53072 53458 . - . ID=gene-MK542_01875;Name=MK542_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01875 JAKUZA010000014.1 Protein Homology CDS 53072 53458 . - 0 ID=cds-MCY7216923.1;Parent=gene-MK542_01875;Dbxref=NCBI_GP:MCY7216923.1;Name=MCY7216923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002962841.1;locus_tag=MK542_01875;product=VOC family protein;protein_id=MCY7216923.1;transl_table=11 JAKUZA010000014.1 Genbank gene 53448 54887 . - . ID=gene-MK542_01880;Name=MK542_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01880 JAKUZA010000014.1 Protein Homology CDS 53448 54887 . - 0 ID=cds-MCY7216924.1;Parent=gene-MK542_01880;Dbxref=NCBI_GP:MCY7216924.1;Name=MCY7216924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033146.1;locus_tag=MK542_01880;product=glycoside hydrolase family 1 protein;protein_id=MCY7216924.1;transl_table=11 JAKUZA010000014.1 Genbank gene 54999 55871 . + . ID=gene-MK542_01885;Name=MK542_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01885 JAKUZA010000014.1 Protein Homology CDS 54999 55871 . + 0 ID=cds-MCY7216925.1;Parent=gene-MK542_01885;Dbxref=NCBI_GP:MCY7216925.1;Name=MCY7216925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926736.1;locus_tag=MK542_01885;product=AraC family transcriptional regulator;protein_id=MCY7216925.1;transl_table=11 JAKUZA010000014.1 Genbank gene 56055 57323 . - . ID=gene-MK542_01890;Name=MK542_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01890 JAKUZA010000014.1 Protein Homology CDS 56055 57323 . - 0 ID=cds-MCY7216926.1;Parent=gene-MK542_01890;Dbxref=NCBI_GP:MCY7216926.1;Name=MCY7216926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591531.1;locus_tag=MK542_01890;product=CapA family protein;protein_id=MCY7216926.1;transl_table=11 JAKUZA010000014.1 Genbank gene 57429 59348 . - . ID=gene-MK542_01895;Name=MK542_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01895 JAKUZA010000014.1 Protein Homology CDS 57429 59348 . - 0 ID=cds-MCY7216927.1;Parent=gene-MK542_01895;Dbxref=NCBI_GP:MCY7216927.1;Name=MCY7216927.1;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918140.1;locus_tag=MK542_01895;product=beta-glucoside-specific PTS transporter subunit IIABC;protein_id=MCY7216927.1;transl_table=11 JAKUZA010000014.1 Genbank gene 59613 60884 . - . ID=gene-MK542_01900;Name=MK542_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01900 JAKUZA010000014.1 Protein Homology CDS 59613 60884 . - 0 ID=cds-MCY7216928.1;Parent=gene-MK542_01900;Dbxref=NCBI_GP:MCY7216928.1;Name=MCY7216928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916012.1;locus_tag=MK542_01900;product=TRZ/ATZ family protein;protein_id=MCY7216928.1;transl_table=11 JAKUZA010000014.1 Genbank gene 60975 61139 . - . ID=gene-MK542_01905;Name=MK542_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01905 JAKUZA010000014.1 Protein Homology CDS 60975 61139 . - 0 ID=cds-MCY7216929.1;Parent=gene-MK542_01905;Dbxref=NCBI_GP:MCY7216929.1;Name=MCY7216929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027629.2;locus_tag=MK542_01905;product=DUF4947 domain-containing protein;protein_id=MCY7216929.1;transl_table=11 JAKUZA010000014.1 Genbank gene 61063 61617 . - . ID=gene-MK542_01910;Name=MK542_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01910 JAKUZA010000014.1 Protein Homology CDS 61063 61617 . - 0 ID=cds-MCY7216930.1;Parent=gene-MK542_01910;Dbxref=NCBI_GP:MCY7216930.1;Name=MCY7216930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027629.2;locus_tag=MK542_01910;product=DUF4947 domain-containing protein;protein_id=MCY7216930.1;transl_table=11 JAKUZA010000014.1 Genbank gene 61740 62675 . - . ID=gene-MK542_01915;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=MK542_01915 JAKUZA010000014.1 Protein Homology CDS 61740 62675 . - 0 ID=cds-MCY7216931.1;Parent=gene-MK542_01915;Dbxref=NCBI_GP:MCY7216931.1;Name=MCY7216931.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903766.1;locus_tag=MK542_01915;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=MCY7216931.1;transl_table=11 JAKUZA010000014.1 Genbank gene 62818 63756 . - . ID=gene-MK542_01920;Name=MK542_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01920 JAKUZA010000014.1 Protein Homology CDS 62818 63756 . - 0 ID=cds-MCY7216932.1;Parent=gene-MK542_01920;Dbxref=NCBI_GP:MCY7216932.1;Name=MCY7216932.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999807.1;locus_tag=MK542_01920;product=dihydroorotate oxidase;protein_id=MCY7216932.1;transl_table=11 JAKUZA010000014.1 Genbank gene 63992 65338 . + . ID=gene-MK542_01925;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=MK542_01925 JAKUZA010000014.1 Protein Homology CDS 63992 65338 . + 0 ID=cds-MCY7216933.1;Parent=gene-MK542_01925;Dbxref=NCBI_GP:MCY7216933.1;Name=MCY7216933.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999806.1;locus_tag=MK542_01925;product=NADP-specific glutamate dehydrogenase;protein_id=MCY7216933.1;transl_table=11 JAKUZA010000014.1 Genbank gene 65425 66003 . - . ID=gene-MK542_01930;Name=MK542_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01930 JAKUZA010000014.1 Protein Homology CDS 65425 66003 . - 0 ID=cds-MCY7216934.1;Parent=gene-MK542_01930;Dbxref=NCBI_GP:MCY7216934.1;Name=MCY7216934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371797.1;locus_tag=MK542_01930;product=M15 family metallopeptidase;protein_id=MCY7216934.1;transl_table=11 JAKUZA010000014.1 Genbank gene 66159 66848 . - . ID=gene-MK542_01935;Name=MK542_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01935 JAKUZA010000014.1 Protein Homology CDS 66159 66848 . - 0 ID=cds-MCY7216935.1;Parent=gene-MK542_01935;Dbxref=NCBI_GP:MCY7216935.1;Name=MCY7216935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590912.1;locus_tag=MK542_01935;product=phosphoglycerate mutase family protein;protein_id=MCY7216935.1;transl_table=11 JAKUZA010000014.1 Genbank gene 67015 67515 . - . ID=gene-MK542_01940;Name=MK542_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01940 JAKUZA010000014.1 Protein Homology CDS 67015 67515 . - 0 ID=cds-MCY7216936.1;Parent=gene-MK542_01940;Dbxref=NCBI_GP:MCY7216936.1;Name=MCY7216936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520698.1;locus_tag=MK542_01940;product=phosphatase PAP2 family protein;protein_id=MCY7216936.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 67704 67966 . - . ID=gene-MK542_01945;Name=MK542_01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_01945;pseudo=true JAKUZA010000014.1 Protein Homology CDS 67704 67966 . - 0 ID=cds-MK542_01945;Parent=gene-MK542_01945;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919604.1;locus_tag=MK542_01945;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 68379 69530 . - . ID=gene-MK542_01950;Name=MK542_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01950 JAKUZA010000014.1 Protein Homology CDS 68379 69530 . - 0 ID=cds-MCY7216937.1;Parent=gene-MK542_01950;Dbxref=NCBI_GP:MCY7216937.1;Name=MCY7216937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932418.1;locus_tag=MK542_01950;product=DUF4352 domain-containing protein;protein_id=MCY7216937.1;transl_table=11 JAKUZA010000014.1 Genbank gene 69721 71478 . - . ID=gene-MK542_01955;Name=MK542_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01955 JAKUZA010000014.1 Protein Homology CDS 69721 71478 . - 0 ID=cds-MCY7216938.1;Parent=gene-MK542_01955;Dbxref=NCBI_GP:MCY7216938.1;Name=MCY7216938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270213.1;locus_tag=MK542_01955;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7216938.1;transl_table=11 JAKUZA010000014.1 Genbank gene 71468 73234 . - . ID=gene-MK542_01960;Name=MK542_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01960 JAKUZA010000014.1 Protein Homology CDS 71468 73234 . - 0 ID=cds-MCY7216939.1;Parent=gene-MK542_01960;Dbxref=NCBI_GP:MCY7216939.1;Name=MCY7216939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731792.1;locus_tag=MK542_01960;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7216939.1;transl_table=11 JAKUZA010000014.1 Genbank gene 73227 73685 . - . ID=gene-MK542_01965;Name=MK542_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01965 JAKUZA010000014.1 Protein Homology CDS 73227 73685 . - 0 ID=cds-MCY7216940.1;Parent=gene-MK542_01965;Dbxref=NCBI_GP:MCY7216940.1;Name=MCY7216940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188212.1;locus_tag=MK542_01965;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=MCY7216940.1;transl_table=11 JAKUZA010000014.1 Genbank gene 73926 74495 . - . ID=gene-MK542_01970;Name=MK542_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01970 JAKUZA010000014.1 Protein Homology CDS 73926 74495 . - 0 ID=cds-MCY7216941.1;Parent=gene-MK542_01970;Dbxref=NCBI_GP:MCY7216941.1;Name=MCY7216941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591799.1;locus_tag=MK542_01970;product=hypothetical protein;protein_id=MCY7216941.1;transl_table=11 JAKUZA010000014.1 Genbank gene 74525 74935 . - . ID=gene-MK542_01975;Name=MK542_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01975 JAKUZA010000014.1 Protein Homology CDS 74525 74935 . - 0 ID=cds-MCY7216942.1;Parent=gene-MK542_01975;Dbxref=NCBI_GP:MCY7216942.1;Name=MCY7216942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659677.1;locus_tag=MK542_01975;product=peptide deformylase;protein_id=MCY7216942.1;transl_table=11 JAKUZA010000014.1 Genbank gene 74985 75884 . - . ID=gene-MK542_01980;Name=MK542_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01980 JAKUZA010000014.1 Protein Homology CDS 74985 75884 . - 0 ID=cds-MCY7216943.1;Parent=gene-MK542_01980;Dbxref=NCBI_GP:MCY7216943.1;Name=MCY7216943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925822.1;locus_tag=MK542_01980;product=ROK family protein;protein_id=MCY7216943.1;transl_table=11 JAKUZA010000014.1 Genbank gene 76045 77931 . - . ID=gene-MK542_01985;Name=MK542_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01985 JAKUZA010000014.1 Protein Homology CDS 76045 77931 . - 0 ID=cds-MCY7216944.1;Parent=gene-MK542_01985;Dbxref=NCBI_GP:MCY7216944.1;Name=MCY7216944.1;Ontology_term=GO:0009401,GO:0008982,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064575.1;locus_tag=MK542_01985;product=sucrose-specific PTS transporter subunit IIBC;protein_id=MCY7216944.1;transl_table=11 JAKUZA010000014.1 Genbank gene 78127 79581 . + . ID=gene-MK542_01990;Name=MK542_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01990 JAKUZA010000014.1 Protein Homology CDS 78127 79581 . + 0 ID=cds-MCY7216945.1;Parent=gene-MK542_01990;Dbxref=NCBI_GP:MCY7216945.1;Name=MCY7216945.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455313.1;locus_tag=MK542_01990;product=sucrose-6-phosphate hydrolase;protein_id=MCY7216945.1;transl_table=11 JAKUZA010000014.1 Genbank gene 79562 80527 . + . ID=gene-MK542_01995;Name=MK542_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01995 JAKUZA010000014.1 Protein Homology CDS 79562 80527 . + 0 ID=cds-MCY7216946.1;Parent=gene-MK542_01995;Dbxref=NCBI_GP:MCY7216946.1;Name=MCY7216946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929307.1;locus_tag=MK542_01995;product=LacI family DNA-binding transcriptional regulator;protein_id=MCY7216946.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 80672 84445 . - . ID=gene-MK542_02000;Name=MK542_02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_02000;pseudo=true JAKUZA010000014.1 Protein Homology CDS 80672 84445 . - 0 ID=cds-MK542_02000;Parent=gene-MK542_02000;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659630.1;locus_tag=MK542_02000;product=pullulanase;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 84717 84929 . + . ID=gene-MK542_02005;Name=MK542_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02005 JAKUZA010000014.1 Protein Homology CDS 84717 84929 . + 0 ID=cds-MCY7216947.1;Parent=gene-MK542_02005;Dbxref=NCBI_GP:MCY7216947.1;Name=MCY7216947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=MK542_02005;product=helix-turn-helix domain-containing protein;protein_id=MCY7216947.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 84972 85123 . + . ID=gene-MK542_02010;Name=MK542_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_02010;pseudo=true JAKUZA010000014.1 Protein Homology CDS 84972 85123 . + 0 ID=cds-MK542_02010;Parent=gene-MK542_02010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010898675.1;locus_tag=MK542_02010;product=IS30 family transposase;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 85565 85990 . - . ID=gene-MK542_02015;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=MK542_02015 JAKUZA010000014.1 Protein Homology CDS 85565 85990 . - 0 ID=cds-MCY7216948.1;Parent=gene-MK542_02015;Dbxref=NCBI_GP:MCY7216948.1;Name=MCY7216948.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371161.1;locus_tag=MK542_02015;product=transcription antitermination factor NusB;protein_id=MCY7216948.1;transl_table=11 JAKUZA010000014.1 Genbank gene 85983 86372 . - . ID=gene-MK542_02020;Name=MK542_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02020 JAKUZA010000014.1 Protein Homology CDS 85983 86372 . - 0 ID=cds-MCY7216949.1;Parent=gene-MK542_02020;Dbxref=NCBI_GP:MCY7216949.1;Name=MCY7216949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896484.1;locus_tag=MK542_02020;product=Asp23/Gls24 family envelope stress response protein;protein_id=MCY7216949.1;transl_table=11 JAKUZA010000014.1 Genbank gene 86403 86963 . - . ID=gene-MK542_02025;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=MK542_02025 JAKUZA010000014.1 Protein Homology CDS 86403 86963 . - 0 ID=cds-MCY7216950.1;Parent=gene-MK542_02025;Dbxref=NCBI_GP:MCY7216950.1;Name=MCY7216950.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=MK542_02025;product=elongation factor P;protein_id=MCY7216950.1;transl_table=11 JAKUZA010000014.1 Genbank gene 87025 88086 . - . ID=gene-MK542_02030;Name=MK542_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02030 JAKUZA010000014.1 Protein Homology CDS 87025 88086 . - 0 ID=cds-MCY7216951.1;Parent=gene-MK542_02030;Dbxref=NCBI_GP:MCY7216951.1;Name=MCY7216951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836519.1;locus_tag=MK542_02030;product=Xaa-Pro peptidase family protein;protein_id=MCY7216951.1;transl_table=11 JAKUZA010000014.1 Genbank gene 88240 91071 . - . ID=gene-MK542_02035;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=MK542_02035 JAKUZA010000014.1 Protein Homology CDS 88240 91071 . - 0 ID=cds-MCY7216952.1;Parent=gene-MK542_02035;Dbxref=NCBI_GP:MCY7216952.1;Name=MCY7216952.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269736.1;locus_tag=MK542_02035;product=excinuclease ABC subunit UvrA;protein_id=MCY7216952.1;transl_table=11 JAKUZA010000014.1 Genbank gene 91194 92138 . + . ID=gene-MK542_02040;Name=MK542_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02040 JAKUZA010000014.1 Protein Homology CDS 91194 92138 . + 0 ID=cds-MCY7216953.1;Parent=gene-MK542_02040;Dbxref=NCBI_GP:MCY7216953.1;Name=MCY7216953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250490.1;locus_tag=MK542_02040;product=magnesium transporter CorA family protein;protein_id=MCY7216953.1;transl_table=11 JAKUZA010000014.1 Genbank gene 92157 92831 . + . ID=gene-MK542_02045;Name=MK542_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02045 JAKUZA010000014.1 Protein Homology CDS 92157 92831 . + 0 ID=cds-MCY7216954.1;Parent=gene-MK542_02045;Dbxref=NCBI_GP:MCY7216954.1;Name=MCY7216954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919618.1;locus_tag=MK542_02045;product=DUF1129 family protein;protein_id=MCY7216954.1;transl_table=11 JAKUZA010000014.1 Genbank pseudogene 92895 93373 . - . ID=gene-MK542_02050;Name=MK542_02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_02050;pseudo=true JAKUZA010000014.1 Protein Homology CDS 92895 93373 . - 0 ID=cds-MK542_02050;Parent=gene-MK542_02050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591686.1;locus_tag=MK542_02050;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAKUZA010000014.1 Genbank gene 93456 93770 . - . ID=gene-MK542_02055;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=MK542_02055 JAKUZA010000014.1 Protein Homology CDS 93456 93770 . - 0 ID=cds-MCY7216955.1;Parent=gene-MK542_02055;Dbxref=NCBI_GP:MCY7216955.1;Name=MCY7216955.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001162959.1;locus_tag=MK542_02055;product=thioredoxin;protein_id=MCY7216955.1;transl_table=11 JAKUZA010000014.1 Genbank gene 93855 95273 . - . ID=gene-MK542_02060;Name=MK542_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02060 JAKUZA010000014.1 Protein Homology CDS 93855 95273 . - 0 ID=cds-MCY7216956.1;Parent=gene-MK542_02060;Dbxref=NCBI_GP:MCY7216956.1;Name=MCY7216956.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896590.1;locus_tag=MK542_02060;product=C69 family dipeptidase;protein_id=MCY7216956.1;transl_table=11 JAKUZA010000014.1 Genbank gene 95374 96018 . - . ID=gene-MK542_02065;Name=MK542_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02065 JAKUZA010000014.1 Protein Homology CDS 95374 96018 . - 0 ID=cds-MCY7216957.1;Parent=gene-MK542_02065;Dbxref=NCBI_GP:MCY7216957.1;Name=MCY7216957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901495.1;locus_tag=MK542_02065;product=GNAT family N-acetyltransferase;protein_id=MCY7216957.1;transl_table=11 JAKUZA010000014.1 Genbank gene 96029 98362 . - . ID=gene-MK542_02070;Name=MK542_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02070 JAKUZA010000014.1 Protein Homology CDS 96029 98362 . - 0 ID=cds-MCY7216958.1;Parent=gene-MK542_02070;Dbxref=NCBI_GP:MCY7216958.1;Name=MCY7216958.1;Ontology_term=GO:0006259,GO:0030983;gbkey=CDS;go_function=mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659728.1;locus_tag=MK542_02070;product=endonuclease MutS2;protein_id=MCY7216958.1;transl_table=11 JAKUZA010000014.1 Genbank gene 98423 98974 . - . ID=gene-MK542_02075;Name=MK542_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02075 JAKUZA010000014.1 Protein Homology CDS 98423 98974 . - 0 ID=cds-MCY7216959.1;Parent=gene-MK542_02075;Dbxref=NCBI_GP:MCY7216959.1;Name=MCY7216959.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903748.1;locus_tag=MK542_02075;product=CvpA family protein;protein_id=MCY7216959.1;transl_table=11 JAKUZA010000014.1 Genbank gene 98985 99275 . - . ID=gene-MK542_02080;Name=MK542_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02080 JAKUZA010000014.1 Protein Homology CDS 98985 99275 . - 0 ID=cds-MCY7216960.1;Parent=gene-MK542_02080;Dbxref=NCBI_GP:MCY7216960.1;Name=MCY7216960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896593.1;locus_tag=MK542_02080;product=hypothetical protein;protein_id=MCY7216960.1;transl_table=11 JAKUZA010000014.1 Genbank gene 99416 100300 . + . ID=gene-MK542_02085;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=MK542_02085 JAKUZA010000014.1 Protein Homology CDS 99416 100300 . + 0 ID=cds-MCY7216961.1;Parent=gene-MK542_02085;Dbxref=NCBI_GP:MCY7216961.1;Name=MCY7216961.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146880.1;locus_tag=MK542_02085;product=ribonuclease HIII;protein_id=MCY7216961.1;transl_table=11 JAKUZA010000014.1 Genbank gene 100304 100936 . + . ID=gene-MK542_02090;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=MK542_02090 JAKUZA010000014.1 Protein Homology CDS 100304 100936 . + 0 ID=cds-MCY7216962.1;Parent=gene-MK542_02090;Dbxref=NCBI_GP:MCY7216962.1;Name=MCY7216962.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591096.1;locus_tag=MK542_02090;product=signal peptidase I;protein_id=MCY7216962.1;transl_table=11 JAKUZA010000014.1 Genbank gene 101015 103375 . + . ID=gene-MK542_02095;Name=MK542_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02095 JAKUZA010000014.1 Protein Homology CDS 101015 103375 . + 0 ID=cds-MCY7216963.1;Parent=gene-MK542_02095;Dbxref=NCBI_GP:MCY7216963.1;Name=MCY7216963.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026424.1;locus_tag=MK542_02095;product=ATP-dependent RecD-like DNA helicase;protein_id=MCY7216963.1;transl_table=11 JAKUZA010000014.1 Genbank gene 103569 104633 . - . ID=gene-MK542_02100;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=MK542_02100 JAKUZA010000014.1 Protein Homology CDS 103569 104633 . - 0 ID=cds-MCY7216964.1;Parent=gene-MK542_02100;Dbxref=NCBI_GP:MCY7216964.1;Name=MCY7216964.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003077853.1;locus_tag=MK542_02100;product=DNA polymerase IV;protein_id=MCY7216964.1;transl_table=11 JAKUZA010000014.1 Genbank gene 104652 105311 . - . ID=gene-MK542_02105;Name=MK542_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02105 JAKUZA010000014.1 Protein Homology CDS 104652 105311 . - 0 ID=cds-MCY7216965.1;Parent=gene-MK542_02105;Dbxref=NCBI_GP:MCY7216965.1;Name=MCY7216965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018375987.1;locus_tag=MK542_02105;product=hypothetical protein;protein_id=MCY7216965.1;transl_table=11 JAKUZA010000014.1 Genbank gene 105539 107854 . + . ID=gene-MK542_02110;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=MK542_02110 JAKUZA010000014.1 Protein Homology CDS 105539 107854 . + 0 ID=cds-MCY7216966.1;Parent=gene-MK542_02110;Dbxref=NCBI_GP:MCY7216966.1;Name=MCY7216966.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999778.1;locus_tag=MK542_02110;product=formate C-acetyltransferase;protein_id=MCY7216966.1;transl_table=11 JAKUZA010000014.1 Genbank gene 107992 108750 . + . ID=gene-MK542_02115;Name=MK542_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02115 JAKUZA010000014.1 Protein Homology CDS 107992 108750 . + 0 ID=cds-MCY7216967.1;Parent=gene-MK542_02115;Dbxref=NCBI_GP:MCY7216967.1;Name=MCY7216967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808264.1;locus_tag=MK542_02115;product=threonine/serine exporter family protein;protein_id=MCY7216967.1;transl_table=11 JAKUZA010000014.1 Genbank gene 108755 109210 . + . ID=gene-MK542_02120;Name=MK542_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02120 JAKUZA010000014.1 Protein Homology CDS 108755 109210 . + 0 ID=cds-MCY7216968.1;Parent=gene-MK542_02120;Dbxref=NCBI_GP:MCY7216968.1;Name=MCY7216968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239205.1;locus_tag=MK542_02120;product=threonine/serine exporter family protein;protein_id=MCY7216968.1;transl_table=11 JAKUZA010000014.1 Genbank gene 109493 110671 . + . ID=gene-MK542_02125;Name=MK542_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02125 JAKUZA010000014.1 Protein Homology CDS 109493 110671 . + 0 ID=cds-MCY7216969.1;Parent=gene-MK542_02125;Dbxref=NCBI_GP:MCY7216969.1;Name=MCY7216969.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605755.1;locus_tag=MK542_02125;product=hydroxymethylglutaryl-CoA synthase;protein_id=MCY7216969.1;transl_table=11 JAKUZA010000014.1 Genbank gene 110668 111951 . + . ID=gene-MK542_02130;Name=MK542_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02130 JAKUZA010000014.1 Protein Homology CDS 110668 111951 . + 0 ID=cds-MCY7216970.1;Parent=gene-MK542_02130;Dbxref=NCBI_GP:MCY7216970.1;Name=MCY7216970.1;Ontology_term=GO:0016054,GO:0004420;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA;go_process=organic acid catabolic process|0016054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188839.1;locus_tag=MK542_02130;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=MCY7216970.1;transl_table=11 JAKUZA010000014.1 Genbank gene 112148 113167 . - . ID=gene-MK542_02135;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=MK542_02135 JAKUZA010000014.1 Protein Homology CDS 112148 113167 . - 0 ID=cds-MCY7216971.1;Parent=gene-MK542_02135;Dbxref=NCBI_GP:MCY7216971.1;Name=MCY7216971.1;Ontology_term=GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029419.1;locus_tag=MK542_02135;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=MCY7216971.1;transl_table=11 JAKUZA010000014.1 Genbank gene 113151 114170 . - . ID=gene-MK542_02140;Name=MK542_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02140 JAKUZA010000014.1 Protein Homology CDS 113151 114170 . - 0 ID=cds-MCY7216972.1;Parent=gene-MK542_02140;Dbxref=NCBI_GP:MCY7216972.1;Name=MCY7216972.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896610.1;locus_tag=MK542_02140;product=phosphomevalonate kinase;protein_id=MCY7216972.1;transl_table=11 JAKUZA010000014.1 Genbank gene 114160 115107 . - . ID=gene-MK542_02145;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=MK542_02145 JAKUZA010000014.1 Protein Homology CDS 114160 115107 . - 0 ID=cds-MCY7216973.1;Parent=gene-MK542_02145;Dbxref=NCBI_GP:MCY7216973.1;Name=MCY7216973.1;Ontology_term=GO:0019287,GO:0004163;gbkey=CDS;gene=mvaD;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931971.1;locus_tag=MK542_02145;product=diphosphomevalonate decarboxylase;protein_id=MCY7216973.1;transl_table=11 JAKUZA010000014.1 Genbank gene 115089 115967 . - . ID=gene-MK542_02150;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=MK542_02150 JAKUZA010000014.1 Protein Homology CDS 115089 115967 . - 0 ID=cds-MCY7216974.1;Parent=gene-MK542_02150;Dbxref=NCBI_GP:MCY7216974.1;Name=MCY7216974.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496;gbkey=CDS;gene=mvk;go_function=mevalonate kinase activity|0004496||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808257.1;locus_tag=MK542_02150;product=mevalonate kinase;protein_id=MCY7216974.1;transl_table=11 JAKUZA010000014.1 Genbank gene 116090 117025 . - . ID=gene-MK542_02155;Name=MK542_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02155 JAKUZA010000014.1 Protein Homology CDS 116090 117025 . - 0 ID=cds-MCY7216975.1;Parent=gene-MK542_02155;Dbxref=NCBI_GP:MCY7216975.1;Name=MCY7216975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931965.1;locus_tag=MK542_02155;product=beta-lactamase family protein;protein_id=MCY7216975.1;transl_table=11 JAKUZA010000014.1 Genbank gene 117022 117756 . - . ID=gene-MK542_02160;Name=MK542_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02160 JAKUZA010000014.1 Protein Homology CDS 117022 117756 . - 0 ID=cds-MCY7216976.1;Parent=gene-MK542_02160;Dbxref=NCBI_GP:MCY7216976.1;Name=MCY7216976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898402.1;locus_tag=MK542_02160;product=CppA family protein;protein_id=MCY7216976.1;transl_table=11 JAKUZA010000014.1 Genbank gene 117968 118837 . - . ID=gene-MK542_02165;Name=MK542_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02165 JAKUZA010000014.1 Protein Homology CDS 117968 118837 . - 0 ID=cds-MCY7216977.1;Parent=gene-MK542_02165;Dbxref=NCBI_GP:MCY7216977.1;Name=MCY7216977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659806.1;locus_tag=MK542_02165;product=aquaporin family protein;protein_id=MCY7216977.1;transl_table=11 JAKUZA010000014.1 Genbank gene 118941 121226 . + . ID=gene-MK542_02170;Name=MK542_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02170 JAKUZA010000014.1 Protein Homology CDS 118941 121226 . + 0 ID=cds-MCY7216978.1;Parent=gene-MK542_02170;Dbxref=NCBI_GP:MCY7216978.1;Name=MCY7216978.1;Ontology_term=GO:0006508,GO:0008239;gbkey=CDS;go_function=dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009567891.1;locus_tag=MK542_02170;product=Xaa-Pro dipeptidyl-peptidase;protein_id=MCY7216978.1;transl_table=11 JAKUZA010000014.1 Genbank gene 121261 121560 . + . ID=gene-MK542_02175;Name=MK542_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02175 JAKUZA010000014.1 Protein Homology CDS 121261 121560 . + 0 ID=cds-MCY7216979.1;Parent=gene-MK542_02175;Dbxref=NCBI_GP:MCY7216979.1;Name=MCY7216979.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808250.1;locus_tag=MK542_02175;product=YbaB/EbfC family nucleoid-associated protein;protein_id=MCY7216979.1;transl_table=11 JAKUZA010000014.1 Genbank gene 121699 123453 . - . ID=gene-MK542_02180;Name=MK542_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02180 JAKUZA010000014.1 Protein Homology CDS 121699 123453 . - 0 ID=cds-MCY7216980.1;Parent=gene-MK542_02180;Dbxref=NCBI_GP:MCY7216980.1;Name=MCY7216980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027111.1;locus_tag=MK542_02180;product=glycerophosphodiester phosphodiesterase;protein_id=MCY7216980.1;transl_table=11 JAKUZA010000014.1 Genbank gene 123660 124154 . - . ID=gene-MK542_02185;Name=MK542_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02185 JAKUZA010000014.1 Protein Homology CDS 123660 124154 . - 0 ID=cds-MCY7216981.1;Parent=gene-MK542_02185;Dbxref=NCBI_GP:MCY7216981.1;Name=MCY7216981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896624.1;locus_tag=MK542_02185;product=DUF536 domain-containing protein;protein_id=MCY7216981.1;transl_table=11 JAKUZA010000014.1 Genbank gene 124268 124996 . - . ID=gene-MK542_02190;Name=MK542_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02190 JAKUZA010000014.1 Protein Homology CDS 124268 124996 . - 0 ID=cds-MCY7216982.1;Parent=gene-MK542_02190;Dbxref=NCBI_GP:MCY7216982.1;Name=MCY7216982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185339.1;locus_tag=MK542_02190;product=rRNA pseudouridine synthase;protein_id=MCY7216982.1;transl_table=11 JAKUZA010000014.1 Genbank gene 125006 126157 . - . ID=gene-MK542_02195;Name=MK542_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02195 JAKUZA010000014.1 Protein Homology CDS 125006 126157 . - 0 ID=cds-MCY7216983.1;Parent=gene-MK542_02195;Dbxref=NCBI_GP:MCY7216983.1;Name=MCY7216983.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010025.1;locus_tag=MK542_02195;product=MFS transporter;protein_id=MCY7216983.1;transl_table=11 JAKUZA010000014.1 Genbank gene 126354 126986 . + . ID=gene-MK542_02200;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=MK542_02200 JAKUZA010000014.1 Protein Homology CDS 126354 126986 . + 0 ID=cds-MCY7216984.1;Parent=gene-MK542_02200;Dbxref=NCBI_GP:MCY7216984.1;Name=MCY7216984.1;Ontology_term=GO:0006464,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899043.1;locus_tag=MK542_02200;product=peptide deformylase;protein_id=MCY7216984.1;transl_table=11 JAKUZA010000014.1 Genbank gene 127054 127284 . - . ID=gene-MK542_02205;Name=MK542_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02205 JAKUZA010000014.1 Protein Homology CDS 127054 127284 . - 0 ID=cds-MCY7216985.1;Parent=gene-MK542_02205;Dbxref=NCBI_GP:MCY7216985.1;Name=MCY7216985.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893807.1;locus_tag=MK542_02205;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MCY7216985.1;transl_table=11 JAKUZA010000014.1 Genbank gene 127379 128620 . - . ID=gene-MK542_02210;Name=MK542_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02210 JAKUZA010000014.1 Protein Homology CDS 127379 128620 . - 0 ID=cds-MCY7216986.1;Parent=gene-MK542_02210;Dbxref=NCBI_GP:MCY7216986.1;Name=MCY7216986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003074254.1;locus_tag=MK542_02210;product=aminopeptidase;protein_id=MCY7216986.1;transl_table=11 JAKUZA010000014.1 Genbank gene 128639 128791 . - . ID=gene-MK542_02215;Name=MK542_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02215 JAKUZA010000014.1 Protein Homology CDS 128639 128791 . - 0 ID=cds-MCY7216987.1;Parent=gene-MK542_02215;Dbxref=NCBI_GP:MCY7216987.1;Name=MCY7216987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009444385.1;locus_tag=MK542_02215;product=hypothetical protein;protein_id=MCY7216987.1;transl_table=11 JAKUZA010000014.1 Genbank gene 128879 129157 . - . ID=gene-MK542_02220;Name=MK542_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02220 JAKUZA010000014.1 Protein Homology CDS 128879 129157 . - 0 ID=cds-MCY7216988.1;Parent=gene-MK542_02220;Dbxref=NCBI_GP:MCY7216988.1;Name=MCY7216988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013904578.1;locus_tag=MK542_02220;product=type II toxin-antitoxin system YafQ family toxin;protein_id=MCY7216988.1;transl_table=11 JAKUZA010000014.1 Genbank gene 129150 129413 . - . ID=gene-MK542_02225;Name=MK542_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02225 JAKUZA010000014.1 Protein Homology CDS 129150 129413 . - 0 ID=cds-MCY7216989.1;Parent=gene-MK542_02225;Dbxref=NCBI_GP:MCY7216989.1;Name=MCY7216989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397199.1;locus_tag=MK542_02225;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MCY7216989.1;transl_table=11 JAKUZA010000014.1 Genbank gene 129610 131400 . + . ID=gene-MK542_02230;Name=MK542_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02230 JAKUZA010000014.1 Protein Homology CDS 129610 131400 . + 0 ID=cds-MCY7216990.1;Parent=gene-MK542_02230;Dbxref=NCBI_GP:MCY7216990.1;Name=MCY7216990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905396.1;locus_tag=MK542_02230;product=NACHT domain-containing protein;protein_id=MCY7216990.1;transl_table=11 JAKUZA010000014.1 Genbank gene 131516 135904 . - . ID=gene-MK542_02235;Name=MK542_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02235 JAKUZA010000014.1 Protein Homology CDS 131516 135904 . - 0 ID=cds-MCY7216991.1;Parent=gene-MK542_02235;Dbxref=NCBI_GP:MCY7216991.1;Name=MCY7216991.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071418.1;locus_tag=MK542_02235;product=PolC-type DNA polymerase III;protein_id=MCY7216991.1;transl_table=11 JAKUZA010000014.1 Genbank gene 136022 136405 . - . ID=gene-MK542_02240;Name=MK542_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02240 JAKUZA010000014.1 Protein Homology CDS 136022 136405 . - 0 ID=cds-MCY7216992.1;Parent=gene-MK542_02240;Dbxref=NCBI_GP:MCY7216992.1;Name=MCY7216992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899051.1;locus_tag=MK542_02240;product=PH domain-containing protein;protein_id=MCY7216992.1;transl_table=11 JAKUZA010000014.1 Genbank gene 136493 138343 . - . ID=gene-MK542_02245;Name=MK542_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02245 JAKUZA010000014.1 Protein Homology CDS 136493 138343 . - 0 ID=cds-MCY7216993.1;Parent=gene-MK542_02245;Dbxref=NCBI_GP:MCY7216993.1;Name=MCY7216993.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605283.1;locus_tag=MK542_02245;product=proline--tRNA ligase;protein_id=MCY7216993.1;transl_table=11 JAKUZA010000014.1 Genbank gene 138389 139645 . - . ID=gene-MK542_02250;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=MK542_02250 JAKUZA010000014.1 Protein Homology CDS 138389 139645 . - 0 ID=cds-MCY7216994.1;Parent=gene-MK542_02250;Dbxref=NCBI_GP:MCY7216994.1;Name=MCY7216994.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192407.1;locus_tag=MK542_02250;product=RIP metalloprotease RseP;protein_id=MCY7216994.1;transl_table=11 JAKUZA010000014.1 Genbank gene 139995 140798 . - . ID=gene-MK542_02255;Name=MK542_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02255 JAKUZA010000014.1 Protein Homology CDS 139995 140798 . - 0 ID=cds-MCY7216995.1;Parent=gene-MK542_02255;Dbxref=NCBI_GP:MCY7216995.1;Name=MCY7216995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922445.1;locus_tag=MK542_02255;product=phosphatidate cytidylyltransferase;protein_id=MCY7216995.1;transl_table=11 JAKUZA010000014.1 Genbank gene 140813 141562 . - . ID=gene-MK542_02260;Name=MK542_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02260 JAKUZA010000014.1 Protein Homology CDS 140813 141562 . - 0 ID=cds-MCY7216996.1;Parent=gene-MK542_02260;Dbxref=NCBI_GP:MCY7216996.1;Name=MCY7216996.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605286.1;locus_tag=MK542_02260;product=isoprenyl transferase;protein_id=MCY7216996.1;transl_table=11 JAKUZA010000014.1 Genbank gene 141782 142117 . - . ID=gene-MK542_02265;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=MK542_02265 JAKUZA010000014.1 Protein Homology CDS 141782 142117 . - 0 ID=cds-MCY7216997.1;Parent=gene-MK542_02265;Dbxref=NCBI_GP:MCY7216997.1;Name=MCY7216997.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914078.1;locus_tag=MK542_02265;product=preprotein translocase subunit YajC;protein_id=MCY7216997.1;transl_table=11 JAKUZA010000014.1 Genbank gene 142237 144213 . - . ID=gene-MK542_02270;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=MK542_02270 JAKUZA010000014.1 Protein Homology CDS 142237 144213 . - 0 ID=cds-MCY7216998.1;Parent=gene-MK542_02270;Dbxref=NCBI_GP:MCY7216998.1;Name=MCY7216998.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185329.1;locus_tag=MK542_02270;product=transketolase;protein_id=MCY7216998.1;transl_table=11 JAKUZA010000014.1 Genbank gene 144310 144468 . - . ID=gene-MK542_02275;Name=MK542_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02275 JAKUZA010000014.1 GeneMarkS-2+ CDS 144310 144468 . - 0 ID=cds-MCY7216999.1;Parent=gene-MK542_02275;Dbxref=NCBI_GP:MCY7216999.1;Name=MCY7216999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_02275;product=hypothetical protein;protein_id=MCY7216999.1;transl_table=11 JAKUZA010000014.1 Genbank gene 144612 144857 . - . ID=gene-MK542_02280;Name=MK542_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02280 JAKUZA010000014.1 Protein Homology CDS 144612 144857 . - 0 ID=cds-MCY7217000.1;Parent=gene-MK542_02280;Dbxref=NCBI_GP:MCY7217000.1;Name=MCY7217000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592291.1;locus_tag=MK542_02280;product=hypothetical protein;protein_id=MCY7217000.1;transl_table=11 JAKUZA010000014.1 Genbank gene 144999 147128 . - . ID=gene-MK542_02285;Name=MK542_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02285 JAKUZA010000014.1 Protein Homology CDS 144999 147128 . - 0 ID=cds-MCY7217001.1;Parent=gene-MK542_02285;Dbxref=NCBI_GP:MCY7217001.1;Name=MCY7217001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032285.1;locus_tag=MK542_02285;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCY7217001.1;transl_table=11 JAKUZA010000014.1 Genbank gene 147650 149461 . - . ID=gene-MK542_02290;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=MK542_02290 JAKUZA010000014.1 Protein Homology CDS 147650 149461 . - 0 ID=cds-MCY7217002.1;Parent=gene-MK542_02290;Dbxref=NCBI_GP:MCY7217002.1;Name=MCY7217002.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621492.1;locus_tag=MK542_02290;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=MCY7217002.1;transl_table=11 JAKUZA010000014.1 Genbank gene 149784 150473 . - . ID=gene-MK542_02295;Name=MK542_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02295 JAKUZA010000014.1 Protein Homology CDS 149784 150473 . - 0 ID=cds-MCY7217003.1;Parent=gene-MK542_02295;Dbxref=NCBI_GP:MCY7217003.1;Name=MCY7217003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193549.1;locus_tag=MK542_02295;product=VIT family protein;protein_id=MCY7217003.1;transl_table=11 JAKUZA010000014.1 Genbank gene 150773 151810 . - . ID=gene-MK542_02300;Name=MK542_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02300 JAKUZA010000014.1 Protein Homology CDS 150773 151810 . - 0 ID=cds-MCY7217004.1;Parent=gene-MK542_02300;Dbxref=NCBI_GP:MCY7217004.1;Name=MCY7217004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904284.1;locus_tag=MK542_02300;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=MCY7217004.1;transl_table=11 JAKUZA010000014.1 Genbank gene 151904 152665 . - . ID=gene-MK542_02305;Name=MK542_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02305 JAKUZA010000014.1 Protein Homology CDS 151904 152665 . - 0 ID=cds-MCY7217005.1;Parent=gene-MK542_02305;Dbxref=NCBI_GP:MCY7217005.1;Name=MCY7217005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026283.1;locus_tag=MK542_02305;product=carboxymuconolactone decarboxylase family protein;protein_id=MCY7217005.1;transl_table=11 JAKUZA010000014.1 Genbank gene 152716 153558 . - . ID=gene-MK542_02310;Name=MK542_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02310 JAKUZA010000014.1 Protein Homology CDS 152716 153558 . - 0 ID=cds-MCY7217006.1;Parent=gene-MK542_02310;Dbxref=NCBI_GP:MCY7217006.1;Name=MCY7217006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026281.1;locus_tag=MK542_02310;product=aldo/keto reductase;protein_id=MCY7217006.1;transl_table=11 JAKUZA010000014.1 Genbank gene 153675 154508 . + . ID=gene-MK542_02315;Name=MK542_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02315 JAKUZA010000014.1 Protein Homology CDS 153675 154508 . + 0 ID=cds-MCY7217007.1;Parent=gene-MK542_02315;Dbxref=NCBI_GP:MCY7217007.1;Name=MCY7217007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026279.1;locus_tag=MK542_02315;product=LysR family transcriptional regulator;protein_id=MCY7217007.1;transl_table=11 JAKUZA010000014.1 Genbank gene 154786 157287 . - . ID=gene-MK542_02320;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=MK542_02320 JAKUZA010000014.1 Protein Homology CDS 154786 157287 . - 0 ID=cds-MCY7217008.1;Parent=gene-MK542_02320;Dbxref=NCBI_GP:MCY7217008.1;Name=MCY7217008.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639013.1;locus_tag=MK542_02320;product=leucine--tRNA ligase;protein_id=MCY7217008.1;transl_table=11 JAKUZA010000014.1 Genbank gene 157475 158173 . + . ID=gene-MK542_02325;Name=MK542_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02325 JAKUZA010000014.1 Protein Homology CDS 157475 158173 . + 0 ID=cds-MCY7217009.1;Parent=gene-MK542_02325;Dbxref=NCBI_GP:MCY7217009.1;Name=MCY7217009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130830.1;locus_tag=MK542_02325;product=ion transporter;protein_id=MCY7217009.1;transl_table=11 JAKUZA010000014.1 Genbank gene 158252 160147 . - . ID=gene-MK542_02330;Name=MK542_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02330 JAKUZA010000014.1 Protein Homology CDS 158252 160147 . - 0 ID=cds-MCY7217010.1;Parent=gene-MK542_02330;Dbxref=NCBI_GP:MCY7217010.1;Name=MCY7217010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922744.1;locus_tag=MK542_02330;product=endopeptidase;protein_id=MCY7217010.1;transl_table=11 JAKUZA010000014.1 Genbank gene 160294 161013 . + . ID=gene-MK542_02335;Name=MK542_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02335 JAKUZA010000014.1 Protein Homology CDS 160294 161013 . + 0 ID=cds-MCY7217011.1;Parent=gene-MK542_02335;Dbxref=NCBI_GP:MCY7217011.1;Name=MCY7217011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028891.1;locus_tag=MK542_02335;product=metal ABC transporter ATP-binding protein;protein_id=MCY7217011.1;transl_table=11 JAKUZA010000014.1 Genbank gene 161015 161857 . + . ID=gene-MK542_02340;Name=MK542_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02340 JAKUZA010000014.1 Protein Homology CDS 161015 161857 . + 0 ID=cds-MCY7217012.1;Parent=gene-MK542_02340;Dbxref=NCBI_GP:MCY7217012.1;Name=MCY7217012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030850.1;locus_tag=MK542_02340;product=metal ABC transporter permease;protein_id=MCY7217012.1;transl_table=11 JAKUZA010000014.1 Genbank gene 161875 162804 . + . ID=gene-MK542_02345;Name=ssaB;gbkey=Gene;gene=ssaB;gene_biotype=protein_coding;locus_tag=MK542_02345 JAKUZA010000014.1 Protein Homology CDS 161875 162804 . + 0 ID=cds-MCY7217013.1;Parent=gene-MK542_02345;Dbxref=NCBI_GP:MCY7217013.1;Name=MCY7217013.1;gbkey=CDS;gene=ssaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836396.1;locus_tag=MK542_02345;product=metal ABC transporter substrate-binding lipoprotein/adhesin SsaB;protein_id=MCY7217013.1;transl_table=11 JAKUZA010000014.1 Genbank gene 162957 163451 . + . ID=gene-MK542_02350;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=MK542_02350 JAKUZA010000014.1 Protein Homology CDS 162957 163451 . + 0 ID=cds-MCY7217014.1;Parent=gene-MK542_02350;Dbxref=NCBI_GP:MCY7217014.1;Name=MCY7217014.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591554.1;locus_tag=MK542_02350;product=thiol peroxidase;protein_id=MCY7217014.1;transl_table=11 JAKUZA010000014.1 Genbank gene 163778 164431 . + . ID=gene-MK542_02355;Name=MK542_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02355 JAKUZA010000014.1 Protein Homology CDS 163778 164431 . + 0 ID=cds-MCY7217015.1;Parent=gene-MK542_02355;Dbxref=NCBI_GP:MCY7217015.1;Name=MCY7217015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262032.1;locus_tag=MK542_02355;product=metal-dependent transcriptional regulator;protein_id=MCY7217015.1;transl_table=11 ##sequence-region JAKUZA010000015.1 1 9937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000015.1 Genbank region 1 9937 . + . ID=JAKUZA010000015.1:1..9937;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000015.1 Genbank gene 247 1035 . + . ID=gene-MK542_02360;Name=MK542_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02360 JAKUZA010000015.1 Protein Homology CDS 247 1035 . + 0 ID=cds-MCY7217016.1;Parent=gene-MK542_02360;Dbxref=NCBI_GP:MCY7217016.1;Name=MCY7217016.1;Ontology_term=GO:0070007;gbkey=CDS;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187748.1;locus_tag=MK542_02360;product=YhfC family glutamic-type intramembrane protease;protein_id=MCY7217016.1;transl_table=11 JAKUZA010000015.1 Genbank gene 1013 1294 . + . ID=gene-MK542_02365;Name=MK542_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02365 JAKUZA010000015.1 Protein Homology CDS 1013 1294 . + 0 ID=cds-MCY7217017.1;Parent=gene-MK542_02365;Dbxref=NCBI_GP:MCY7217017.1;Name=MCY7217017.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130660.1;locus_tag=MK542_02365;product=autorepressor SdpR family transcription factor;protein_id=MCY7217017.1;transl_table=11 JAKUZA010000015.1 Genbank gene 1281 1778 . + . ID=gene-MK542_02370;Name=MK542_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02370 JAKUZA010000015.1 Protein Homology CDS 1281 1778 . + 0 ID=cds-MCY7217018.1;Parent=gene-MK542_02370;Dbxref=NCBI_GP:MCY7217018.1;Name=MCY7217018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897958.1;locus_tag=MK542_02370;product=DUF1648 domain-containing protein;protein_id=MCY7217018.1;transl_table=11 JAKUZA010000015.1 Genbank gene 1826 2512 . + . ID=gene-MK542_02375;Name=MK542_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02375 JAKUZA010000015.1 Protein Homology CDS 1826 2512 . + 0 ID=cds-MCY7217019.1;Parent=gene-MK542_02375;Dbxref=NCBI_GP:MCY7217019.1;Name=MCY7217019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910255.1;locus_tag=MK542_02375;product=Crp/Fnr family transcriptional regulator;protein_id=MCY7217019.1;transl_table=11 JAKUZA010000015.1 Genbank gene 2819 4048 . + . ID=gene-MK542_02380;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=MK542_02380 JAKUZA010000015.1 Protein Homology CDS 2819 4048 . + 0 ID=cds-MCY7217020.1;Parent=gene-MK542_02380;Dbxref=NCBI_GP:MCY7217020.1;Name=MCY7217020.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094613.1;locus_tag=MK542_02380;product=arginine deiminase;protein_id=MCY7217020.1;transl_table=11 JAKUZA010000015.1 Genbank gene 4106 5122 . + . ID=gene-MK542_02385;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=MK542_02385 JAKUZA010000015.1 Protein Homology CDS 4106 5122 . + 0 ID=cds-MCY7217021.1;Parent=gene-MK542_02385;Dbxref=NCBI_GP:MCY7217021.1;Name=MCY7217021.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073325.1;locus_tag=MK542_02385;product=ornithine carbamoyltransferase;protein_id=MCY7217021.1;transl_table=11 JAKUZA010000015.1 Genbank gene 5285 6232 . + . ID=gene-MK542_02390;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=MK542_02390 JAKUZA010000015.1 Protein Homology CDS 5285 6232 . + 0 ID=cds-MCY7217022.1;Parent=gene-MK542_02390;Dbxref=NCBI_GP:MCY7217022.1;Name=MCY7217022.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025409.1;locus_tag=MK542_02390;product=carbamate kinase;protein_id=MCY7217022.1;transl_table=11 JAKUZA010000015.1 Genbank gene 6516 8027 . + . ID=gene-MK542_02395;Name=MK542_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02395 JAKUZA010000015.1 Protein Homology CDS 6516 8027 . + 0 ID=cds-MCY7217023.1;Parent=gene-MK542_02395;Dbxref=NCBI_GP:MCY7217023.1;Name=MCY7217023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191872.1;locus_tag=MK542_02395;product=YfcC family protein;protein_id=MCY7217023.1;transl_table=11 JAKUZA010000015.1 Genbank gene 8049 9383 . + . ID=gene-MK542_02400;Name=MK542_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02400 JAKUZA010000015.1 Protein Homology CDS 8049 9383 . + 0 ID=cds-MCY7217024.1;Parent=gene-MK542_02400;Dbxref=NCBI_GP:MCY7217024.1;Name=MCY7217024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025405.1;locus_tag=MK542_02400;product=dipeptidase;protein_id=MCY7217024.1;transl_table=11 JAKUZA010000015.1 Genbank gene 9699 9937 . + . ID=gene-MK542_02405;Name=tnpA;end_range=9937,.;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=MK542_02405;partial=true JAKUZA010000015.1 Protein Homology CDS 9699 9937 . + 0 ID=cds-MCY7217025.1;Parent=gene-MK542_02405;Dbxref=NCBI_GP:MCY7217025.1;Name=MCY7217025.1;Ontology_term=GO:0004803;end_range=9937,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148688.1;locus_tag=MK542_02405;partial=true;product=IS200/IS605 family transposase;protein_id=MCY7217025.1;transl_table=11 ##sequence-region JAKUZA010000016.1 1 145036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000016.1 Genbank region 1 145036 . + . ID=JAKUZA010000016.1:1..145036;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000016.1 Genbank gene 130 258 . + . ID=gene-MK542_02410;Name=MK542_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02410 JAKUZA010000016.1 Protein Homology CDS 130 258 . + 0 ID=cds-MCY7217026.1;Parent=gene-MK542_02410;Dbxref=NCBI_GP:MCY7217026.1;Name=MCY7217026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590638.1;locus_tag=MK542_02410;product=DUF4044 domain-containing protein;protein_id=MCY7217026.1;transl_table=11 JAKUZA010000016.1 Genbank gene 311 684 . + . ID=gene-MK542_02415;Name=obgE;end_range=684,.;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=MK542_02415;partial=true JAKUZA010000016.1 Protein Homology CDS 311 684 . + 0 ID=cds-MCY7217027.1;Parent=gene-MK542_02415;Dbxref=NCBI_GP:MCY7217027.1;Name=MCY7217027.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;end_range=684,.;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061643.1;locus_tag=MK542_02415;partial=true;product=GTPase ObgE;protein_id=MCY7217027.1;transl_table=11 JAKUZA010000016.1 Genbank gene 700 1621 . + . ID=gene-MK542_02420;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=MK542_02420;partial=true;start_range=.,700 JAKUZA010000016.1 Protein Homology CDS 700 1621 . + 1 ID=cds-MCY7217028.1;Parent=gene-MK542_02420;Dbxref=NCBI_GP:MCY7217028.1;Name=MCY7217028.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061643.1;locus_tag=MK542_02420;partial=true;product=GTPase ObgE;protein_id=MCY7217028.1;start_range=.,700;transl_table=11 JAKUZA010000016.1 Genbank gene 1633 1791 . + . ID=gene-MK542_02425;Name=MK542_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02425 JAKUZA010000016.1 Protein Homology CDS 1633 1791 . + 0 ID=cds-MCY7217029.1;Parent=gene-MK542_02425;Dbxref=NCBI_GP:MCY7217029.1;Name=MCY7217029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069441.1;locus_tag=MK542_02425;product=hypothetical protein;protein_id=MCY7217029.1;transl_table=11 JAKUZA010000016.1 Genbank gene 1913 2329 . + . ID=gene-MK542_02430;Name=MK542_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02430 JAKUZA010000016.1 Protein Homology CDS 1913 2329 . + 0 ID=cds-MCY7217030.1;Parent=gene-MK542_02430;Dbxref=NCBI_GP:MCY7217030.1;Name=MCY7217030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191608.1;locus_tag=MK542_02430;product=GNAT family N-acetyltransferase;protein_id=MCY7217030.1;transl_table=11 JAKUZA010000016.1 Genbank gene 2525 4291 . + . ID=gene-MK542_02435;Name=MK542_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02435 JAKUZA010000016.1 Protein Homology CDS 2525 4291 . + 0 ID=cds-MCY7217031.1;Parent=gene-MK542_02435;Dbxref=NCBI_GP:MCY7217031.1;Name=MCY7217031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262184.1;locus_tag=MK542_02435;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7217031.1;transl_table=11 JAKUZA010000016.1 Genbank gene 4284 6029 . + . ID=gene-MK542_02440;Name=MK542_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02440 JAKUZA010000016.1 Protein Homology CDS 4284 6029 . + 0 ID=cds-MCY7217032.1;Parent=gene-MK542_02440;Dbxref=NCBI_GP:MCY7217032.1;Name=MCY7217032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895789.1;locus_tag=MK542_02440;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7217032.1;transl_table=11 JAKUZA010000016.1 Genbank gene 6124 7716 . + . ID=gene-MK542_02445;Name=MK542_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02445 JAKUZA010000016.1 Protein Homology CDS 6124 7716 . + 0 ID=cds-MCY7217033.1;Parent=gene-MK542_02445;Dbxref=NCBI_GP:MCY7217033.1;Name=MCY7217033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002280617.1;locus_tag=MK542_02445;product=DUF2130 domain-containing protein;protein_id=MCY7217033.1;transl_table=11 JAKUZA010000016.1 Genbank gene 7768 8574 . + . ID=gene-MK542_02450;Name=MK542_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02450 JAKUZA010000016.1 Protein Homology CDS 7768 8574 . + 0 ID=cds-MCY7217034.1;Parent=gene-MK542_02450;Dbxref=NCBI_GP:MCY7217034.1;Name=MCY7217034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076337.1;locus_tag=MK542_02450;product=alpha/beta hydrolase;protein_id=MCY7217034.1;transl_table=11 JAKUZA010000016.1 Genbank gene 8578 9456 . + . ID=gene-MK542_02455;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=MK542_02455 JAKUZA010000016.1 Protein Homology CDS 8578 9456 . + 0 ID=cds-MCY7217035.1;Parent=gene-MK542_02455;Dbxref=NCBI_GP:MCY7217035.1;Name=MCY7217035.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590179.1;locus_tag=MK542_02455;product=tRNA pseudouridine(55) synthase TruB;protein_id=MCY7217035.1;transl_table=11 JAKUZA010000016.1 Genbank gene 9479 10411 . + . ID=gene-MK542_02460;Name=MK542_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02460 JAKUZA010000016.1 Protein Homology CDS 9479 10411 . + 0 ID=cds-MCY7217036.1;Parent=gene-MK542_02460;Dbxref=NCBI_GP:MCY7217036.1;Name=MCY7217036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187287.1;locus_tag=MK542_02460;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=MCY7217036.1;transl_table=11 JAKUZA010000016.1 Genbank gene 10523 10921 . + . ID=gene-MK542_02465;Name=MK542_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02465 JAKUZA010000016.1 Protein Homology CDS 10523 10921 . + 0 ID=cds-MCY7217037.1;Parent=gene-MK542_02465;Dbxref=NCBI_GP:MCY7217037.1;Name=MCY7217037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604875.1;locus_tag=MK542_02465;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=MCY7217037.1;transl_table=11 JAKUZA010000016.1 Genbank gene 10925 11203 . + . ID=gene-MK542_02470;Name=MK542_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02470 JAKUZA010000016.1 Protein Homology CDS 10925 11203 . + 0 ID=cds-MCY7217038.1;Parent=gene-MK542_02470;Dbxref=NCBI_GP:MCY7217038.1;Name=MCY7217038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895777.1;locus_tag=MK542_02470;product=UPF0223 family protein;protein_id=MCY7217038.1;transl_table=11 JAKUZA010000016.1 Genbank gene 11193 11963 . + . ID=gene-MK542_02475;Name=MK542_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02475 JAKUZA010000016.1 Protein Homology CDS 11193 11963 . + 0 ID=cds-MCY7217039.1;Parent=gene-MK542_02475;Dbxref=NCBI_GP:MCY7217039.1;Name=MCY7217039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590250.1;locus_tag=MK542_02475;product=inositol monophosphatase family protein;protein_id=MCY7217039.1;transl_table=11 JAKUZA010000016.1 Genbank gene 11965 13278 . + . ID=gene-MK542_02480;Name=MK542_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02480 JAKUZA010000016.1 Protein Homology CDS 11965 13278 . + 0 ID=cds-MCY7217040.1;Parent=gene-MK542_02480;Dbxref=NCBI_GP:MCY7217040.1;Name=MCY7217040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604878.1;locus_tag=MK542_02480;product=RsmF rRNA methyltransferase first C-terminal domain-containing protein;protein_id=MCY7217040.1;transl_table=11 JAKUZA010000016.1 Genbank gene 13377 14261 . + . ID=gene-MK542_02485;Name=MK542_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02485 JAKUZA010000016.1 Protein Homology CDS 13377 14261 . + 0 ID=cds-MCY7217041.1;Parent=gene-MK542_02485;Dbxref=NCBI_GP:MCY7217041.1;Name=MCY7217041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590254.1;locus_tag=MK542_02485;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=MCY7217041.1;transl_table=11 JAKUZA010000016.1 Genbank gene 14258 15175 . + . ID=gene-MK542_02490;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=MK542_02490 JAKUZA010000016.1 Protein Homology CDS 14258 15175 . + 0 ID=cds-MCY7217042.1;Parent=gene-MK542_02490;Dbxref=NCBI_GP:MCY7217042.1;Name=MCY7217042.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378778.1;locus_tag=MK542_02490;product=phosphate ABC transporter permease subunit PstC;protein_id=MCY7217042.1;transl_table=11 JAKUZA010000016.1 Genbank gene 15165 16049 . + . ID=gene-MK542_02495;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=MK542_02495 JAKUZA010000016.1 Protein Homology CDS 15165 16049 . + 0 ID=cds-MCY7217043.1;Parent=gene-MK542_02495;Dbxref=NCBI_GP:MCY7217043.1;Name=MCY7217043.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009443446.1;locus_tag=MK542_02495;product=phosphate ABC transporter permease PstA;protein_id=MCY7217043.1;transl_table=11 JAKUZA010000016.1 Genbank gene 16061 16864 . + . ID=gene-MK542_02500;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=MK542_02500 JAKUZA010000016.1 Protein Homology CDS 16061 16864 . + 0 ID=cds-MCY7217044.1;Parent=gene-MK542_02500;Dbxref=NCBI_GP:MCY7217044.1;Name=MCY7217044.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852852.1;locus_tag=MK542_02500;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MCY7217044.1;transl_table=11 JAKUZA010000016.1 Genbank gene 16892 17650 . + . ID=gene-MK542_02505;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=MK542_02505 JAKUZA010000016.1 Protein Homology CDS 16892 17650 . + 0 ID=cds-MCY7217045.1;Parent=gene-MK542_02505;Dbxref=NCBI_GP:MCY7217045.1;Name=MCY7217045.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294590.1;locus_tag=MK542_02505;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MCY7217045.1;transl_table=11 JAKUZA010000016.1 Genbank gene 17701 18354 . + . ID=gene-MK542_02510;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=MK542_02510 JAKUZA010000016.1 Protein Homology CDS 17701 18354 . + 0 ID=cds-MCY7217046.1;Parent=gene-MK542_02510;Dbxref=NCBI_GP:MCY7217046.1;Name=MCY7217046.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946475.1;locus_tag=MK542_02510;product=phosphate signaling complex protein PhoU;protein_id=MCY7217046.1;transl_table=11 JAKUZA010000016.1 Genbank gene 18717 19280 . + . ID=gene-MK542_02515;Name=MK542_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02515 JAKUZA010000016.1 Protein Homology CDS 18717 19280 . + 0 ID=cds-MCY7217047.1;Parent=gene-MK542_02515;Dbxref=NCBI_GP:MCY7217047.1;Name=MCY7217047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912232.1;locus_tag=MK542_02515;product=hypothetical protein;protein_id=MCY7217047.1;transl_table=11 JAKUZA010000016.1 Genbank gene 19407 20039 . + . ID=gene-MK542_02520;Name=MK542_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02520 JAKUZA010000016.1 Protein Homology CDS 19407 20039 . + 0 ID=cds-MCY7217048.1;Parent=gene-MK542_02520;Dbxref=NCBI_GP:MCY7217048.1;Name=MCY7217048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897759.1;locus_tag=MK542_02520;product=hypothetical protein;protein_id=MCY7217048.1;transl_table=11 JAKUZA010000016.1 Genbank gene 20030 21349 . + . ID=gene-MK542_02525;Name=MK542_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02525 JAKUZA010000016.1 Protein Homology CDS 20030 21349 . + 0 ID=cds-MCY7217049.1;Parent=gene-MK542_02525;Dbxref=NCBI_GP:MCY7217049.1;Name=MCY7217049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604890.1;locus_tag=MK542_02525;product=hypothetical protein;protein_id=MCY7217049.1;transl_table=11 JAKUZA010000016.1 Genbank gene 21360 21656 . + . ID=gene-MK542_02530;Name=MK542_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02530 JAKUZA010000016.1 Protein Homology CDS 21360 21656 . + 0 ID=cds-MCY7217050.1;Parent=gene-MK542_02530;Dbxref=NCBI_GP:MCY7217050.1;Name=MCY7217050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900565.1;locus_tag=MK542_02530;product=hypothetical protein;protein_id=MCY7217050.1;transl_table=11 JAKUZA010000016.1 Genbank gene 21665 21991 . + . ID=gene-MK542_02535;Name=MK542_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02535 JAKUZA010000016.1 Protein Homology CDS 21665 21991 . + 0 ID=cds-MCY7217051.1;Parent=gene-MK542_02535;Dbxref=NCBI_GP:MCY7217051.1;Name=MCY7217051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895760.1;locus_tag=MK542_02535;product=hypothetical protein;protein_id=MCY7217051.1;transl_table=11 JAKUZA010000016.1 Genbank gene 22235 24778 . + . ID=gene-MK542_02540;Name=MK542_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02540 JAKUZA010000016.1 Protein Homology CDS 22235 24778 . + 0 ID=cds-MCY7217052.1;Parent=gene-MK542_02540;Dbxref=NCBI_GP:MCY7217052.1;Name=MCY7217052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009569000.1;locus_tag=MK542_02540;product=M1 family metallopeptidase;protein_id=MCY7217052.1;transl_table=11 JAKUZA010000016.1 Genbank gene 25509 27023 . + . ID=gene-MK542_02545;Name=MK542_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02545 JAKUZA010000016.1 Protein Homology CDS 25509 27023 . + 0 ID=cds-MCY7217053.1;Parent=gene-MK542_02545;Dbxref=NCBI_GP:MCY7217053.1;Name=MCY7217053.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021006.2;locus_tag=MK542_02545;product=hypothetical protein;protein_id=MCY7217053.1;transl_table=11 JAKUZA010000016.1 Genbank gene 27036 28229 . + . ID=gene-MK542_02550;Name=MK542_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02550 JAKUZA010000016.1 Protein Homology CDS 27036 28229 . + 0 ID=cds-MCY7217054.1;Parent=gene-MK542_02550;Dbxref=NCBI_GP:MCY7217054.1;Name=MCY7217054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020442.2;locus_tag=MK542_02550;product=FRG domain-containing protein;protein_id=MCY7217054.1;transl_table=11 JAKUZA010000016.1 Genbank gene 28231 29841 . + . ID=gene-MK542_02555;Name=MK542_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02555 JAKUZA010000016.1 GeneMarkS-2+ CDS 28231 29841 . + 0 ID=cds-MCY7217055.1;Parent=gene-MK542_02555;Dbxref=NCBI_GP:MCY7217055.1;Name=MCY7217055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_02555;product=hypothetical protein;protein_id=MCY7217055.1;transl_table=11 JAKUZA010000016.1 Genbank gene 29816 31912 . + . ID=gene-MK542_02560;Name=MK542_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02560 JAKUZA010000016.1 Protein Homology CDS 29816 31912 . + 0 ID=cds-MCY7217056.1;Parent=gene-MK542_02560;Dbxref=NCBI_GP:MCY7217056.1;Name=MCY7217056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015728.2;locus_tag=MK542_02560;product=RAMP superfamily CRISPR-associated protein;protein_id=MCY7217056.1;transl_table=11 JAKUZA010000016.1 Genbank gene 31914 33311 . + . ID=gene-MK542_02565;Name=MK542_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02565 JAKUZA010000016.1 Protein Homology CDS 31914 33311 . + 0 ID=cds-MCY7217057.1;Parent=gene-MK542_02565;Dbxref=NCBI_GP:MCY7217057.1;Name=MCY7217057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015728.2;locus_tag=MK542_02565;product=RAMP superfamily CRISPR-associated protein;protein_id=MCY7217057.1;transl_table=11 JAKUZA010000016.1 Genbank gene 33283 33858 . + . ID=gene-MK542_02570;Name=csx19;gbkey=Gene;gene=csx19;gene_biotype=protein_coding;locus_tag=MK542_02570 JAKUZA010000016.1 Protein Homology CDS 33283 33858 . + 0 ID=cds-MCY7217058.1;Parent=gene-MK542_02570;Dbxref=NCBI_GP:MCY7217058.1;Name=MCY7217058.1;gbkey=CDS;gene=csx19;inference=COORDINATES: protein motif:HMM:TIGR03984.2;locus_tag=MK542_02570;product=CRISPR-associated protein Csx19;protein_id=MCY7217058.1;transl_table=11 JAKUZA010000016.1 Genbank gene 33851 35620 . + . ID=gene-MK542_02575;Name=MK542_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02575 JAKUZA010000016.1 Protein Homology CDS 33851 35620 . + 0 ID=cds-MCY7217059.1;Parent=gene-MK542_02575;Dbxref=NCBI_GP:MCY7217059.1;Name=MCY7217059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015728.2;locus_tag=MK542_02575;product=RAMP superfamily CRISPR-associated protein;protein_id=MCY7217059.1;transl_table=11 JAKUZA010000016.1 Genbank gene 35976 36398 . + . ID=gene-MK542_02580;Name=MK542_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02580 JAKUZA010000016.1 Protein Homology CDS 35976 36398 . + 0 ID=cds-MCY7217060.1;Parent=gene-MK542_02580;Dbxref=NCBI_GP:MCY7217060.1;Name=MCY7217060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590264.1;locus_tag=MK542_02580;product=hypothetical protein;protein_id=MCY7217060.1;transl_table=11 JAKUZA010000016.1 Genbank gene 36518 37192 . + . ID=gene-MK542_02585;Name=MK542_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02585 JAKUZA010000016.1 Protein Homology CDS 36518 37192 . + 0 ID=cds-MCY7217061.1;Parent=gene-MK542_02585;Dbxref=NCBI_GP:MCY7217061.1;Name=MCY7217061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372551.1;locus_tag=MK542_02585;product=response regulator transcription factor;protein_id=MCY7217061.1;transl_table=11 JAKUZA010000016.1 Genbank gene 37182 38540 . + . ID=gene-MK542_02590;Name=MK542_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02590 JAKUZA010000016.1 Protein Homology CDS 37182 38540 . + 0 ID=cds-MCY7217062.1;Parent=gene-MK542_02590;Dbxref=NCBI_GP:MCY7217062.1;Name=MCY7217062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596562.1;locus_tag=MK542_02590;product=HAMP domain-containing histidine kinase;protein_id=MCY7217062.1;transl_table=11 JAKUZA010000016.1 Genbank gene 38617 39003 . + . ID=gene-MK542_02595;Name=MK542_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02595 JAKUZA010000016.1 Protein Homology CDS 38617 39003 . + 0 ID=cds-MCY7217063.1;Parent=gene-MK542_02595;Dbxref=NCBI_GP:MCY7217063.1;Name=MCY7217063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921548.1;locus_tag=MK542_02595;product=VOC family protein;protein_id=MCY7217063.1;transl_table=11 JAKUZA010000016.1 Genbank gene 39204 40490 . + . ID=gene-MK542_02600;Name=MK542_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02600 JAKUZA010000016.1 Protein Homology CDS 39204 40490 . + 0 ID=cds-MCY7217064.1;Parent=gene-MK542_02600;Dbxref=NCBI_GP:MCY7217064.1;Name=MCY7217064.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906763.1;locus_tag=MK542_02600;product=polysaccharide deacetylase family protein;protein_id=MCY7217064.1;transl_table=11 JAKUZA010000016.1 Genbank gene 40573 41661 . - . ID=gene-MK542_02605;Name=MK542_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02605 JAKUZA010000016.1 Protein Homology CDS 40573 41661 . - 0 ID=cds-MCY7217065.1;Parent=gene-MK542_02605;Dbxref=NCBI_GP:MCY7217065.1;Name=MCY7217065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604899.1;locus_tag=MK542_02605;product=DEAD/DEAH box helicase;protein_id=MCY7217065.1;transl_table=11 JAKUZA010000016.1 Genbank gene 41654 42634 . - . ID=gene-MK542_02610;Name=MK542_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02610 JAKUZA010000016.1 Protein Homology CDS 41654 42634 . - 0 ID=cds-MCY7217066.1;Parent=gene-MK542_02610;Dbxref=NCBI_GP:MCY7217066.1;Name=MCY7217066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187231.1;locus_tag=MK542_02610;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MCY7217066.1;transl_table=11 JAKUZA010000016.1 Genbank gene 42740 43375 . + . ID=gene-MK542_02615;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=MK542_02615 JAKUZA010000016.1 Protein Homology CDS 42740 43375 . + 0 ID=cds-MCY7217067.1;Parent=gene-MK542_02615;Dbxref=NCBI_GP:MCY7217067.1;Name=MCY7217067.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660533.1;locus_tag=MK542_02615;product=uridine kinase;protein_id=MCY7217067.1;transl_table=11 JAKUZA010000016.1 Genbank gene 43416 44090 . + . ID=gene-MK542_02620;Name=MK542_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02620 JAKUZA010000016.1 Protein Homology CDS 43416 44090 . + 0 ID=cds-MCY7217068.1;Parent=gene-MK542_02620;Dbxref=NCBI_GP:MCY7217068.1;Name=MCY7217068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754532.1;locus_tag=MK542_02620;product=DUF1275 domain-containing protein;protein_id=MCY7217068.1;transl_table=11 JAKUZA010000016.1 Genbank gene 44521 46086 . + . ID=gene-MK542_02625;Name=MK542_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02625 JAKUZA010000016.1 Protein Homology CDS 44521 46086 . + 0 ID=cds-MCY7217069.1;Parent=gene-MK542_02625;Dbxref=NCBI_GP:MCY7217069.1;Name=MCY7217069.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604910.1;locus_tag=MK542_02625;product=2-isopropylmalate synthase;protein_id=MCY7217069.1;transl_table=11 JAKUZA010000016.1 Genbank gene 46099 47136 . + . ID=gene-MK542_02630;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=MK542_02630 JAKUZA010000016.1 Protein Homology CDS 46099 47136 . + 0 ID=cds-MCY7217070.1;Parent=gene-MK542_02630;Dbxref=NCBI_GP:MCY7217070.1;Name=MCY7217070.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590284.1;locus_tag=MK542_02630;product=3-isopropylmalate dehydrogenase;protein_id=MCY7217070.1;transl_table=11 JAKUZA010000016.1 Genbank gene 47133 47399 . + . ID=gene-MK542_02635;Name=MK542_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02635 JAKUZA010000016.1 Protein Homology CDS 47133 47399 . + 0 ID=cds-MCY7217071.1;Parent=gene-MK542_02635;Dbxref=NCBI_GP:MCY7217071.1;Name=MCY7217071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909941.1;locus_tag=MK542_02635;product=DUF1294 domain-containing protein;protein_id=MCY7217071.1;transl_table=11 JAKUZA010000016.1 Genbank gene 47401 48783 . + . ID=gene-MK542_02640;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=MK542_02640 JAKUZA010000016.1 Protein Homology CDS 47401 48783 . + 0 ID=cds-MCY7217072.1;Parent=gene-MK542_02640;Dbxref=NCBI_GP:MCY7217072.1;Name=MCY7217072.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191527.1;locus_tag=MK542_02640;product=3-isopropylmalate dehydratase large subunit;protein_id=MCY7217072.1;transl_table=11 JAKUZA010000016.1 Genbank gene 48793 49383 . + . ID=gene-MK542_02645;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=MK542_02645 JAKUZA010000016.1 Protein Homology CDS 48793 49383 . + 0 ID=cds-MCY7217073.1;Parent=gene-MK542_02645;Dbxref=NCBI_GP:MCY7217073.1;Name=MCY7217073.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897735.1;locus_tag=MK542_02645;product=3-isopropylmalate dehydratase small subunit;protein_id=MCY7217073.1;transl_table=11 JAKUZA010000016.1 Genbank gene 49483 50262 . + . ID=gene-MK542_02650;Name=MK542_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02650 JAKUZA010000016.1 Protein Homology CDS 49483 50262 . + 0 ID=cds-MCY7217074.1;Parent=gene-MK542_02650;Dbxref=NCBI_GP:MCY7217074.1;Name=MCY7217074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=MK542_02650;product=translation factor (SUA5);protein_id=MCY7217074.1;transl_table=11 JAKUZA010000016.1 Genbank gene 50451 51263 . + . ID=gene-MK542_02655;Name=MK542_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02655 JAKUZA010000016.1 Protein Homology CDS 50451 51263 . + 0 ID=cds-MCY7217075.1;Parent=gene-MK542_02655;Dbxref=NCBI_GP:MCY7217075.1;Name=MCY7217075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018367644.1;locus_tag=MK542_02655;product=Sir2 silent information regulator family NAD-dependent deacetylase;protein_id=MCY7217075.1;transl_table=11 JAKUZA010000016.1 Genbank gene 51251 52003 . + . ID=gene-MK542_02660;Name=MK542_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02660 JAKUZA010000016.1 Protein Homology CDS 51251 52003 . + 0 ID=cds-MCY7217076.1;Parent=gene-MK542_02660;Dbxref=NCBI_GP:MCY7217076.1;Name=MCY7217076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014608714.1;locus_tag=MK542_02660;product=protein-ADP-ribose hydrolase;protein_id=MCY7217076.1;transl_table=11 JAKUZA010000016.1 Genbank gene 52069 52512 . + . ID=gene-MK542_02665;Name=MK542_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02665 JAKUZA010000016.1 Protein Homology CDS 52069 52512 . + 0 ID=cds-MCY7217077.1;Parent=gene-MK542_02665;Dbxref=NCBI_GP:MCY7217077.1;Name=MCY7217077.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655223.1;locus_tag=MK542_02665;product=MarR family transcriptional regulator;protein_id=MCY7217077.1;transl_table=11 JAKUZA010000016.1 Genbank gene 52516 53280 . + . ID=gene-MK542_02670;Name=MK542_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02670 JAKUZA010000016.1 Protein Homology CDS 52516 53280 . + 0 ID=cds-MCY7217078.1;Parent=gene-MK542_02670;Dbxref=NCBI_GP:MCY7217078.1;Name=MCY7217078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043863.1;locus_tag=MK542_02670;product=nuclear transport factor 2 family protein;protein_id=MCY7217078.1;transl_table=11 JAKUZA010000016.1 Genbank gene 53295 54257 . + . ID=gene-MK542_02675;Name=MK542_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02675 JAKUZA010000016.1 Protein Homology CDS 53295 54257 . + 0 ID=cds-MCY7217079.1;Parent=gene-MK542_02675;Dbxref=NCBI_GP:MCY7217079.1;Name=MCY7217079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590294.1;locus_tag=MK542_02675;product=zinc-binding dehydrogenase;protein_id=MCY7217079.1;transl_table=11 JAKUZA010000016.1 Genbank gene 54254 54982 . + . ID=gene-MK542_02680;Name=MK542_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02680 JAKUZA010000016.1 Protein Homology CDS 54254 54982 . + 0 ID=cds-MCY7217080.1;Parent=gene-MK542_02680;Dbxref=NCBI_GP:MCY7217080.1;Name=MCY7217080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754745.1;locus_tag=MK542_02680;product=ABC transporter ATP-binding protein;protein_id=MCY7217080.1;transl_table=11 JAKUZA010000016.1 Genbank gene 54975 56495 . + . ID=gene-MK542_02685;Name=MK542_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02685 JAKUZA010000016.1 Protein Homology CDS 54975 56495 . + 0 ID=cds-MCY7217081.1;Parent=gene-MK542_02685;Dbxref=NCBI_GP:MCY7217081.1;Name=MCY7217081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187196.1;locus_tag=MK542_02685;product=ABC transporter permease/substrate-binding protein;protein_id=MCY7217081.1;transl_table=11 JAKUZA010000016.1 Genbank gene 56646 56963 . + . ID=gene-MK542_02690;Name=MK542_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02690 JAKUZA010000016.1 Protein Homology CDS 56646 56963 . + 0 ID=cds-MCY7217082.1;Parent=gene-MK542_02690;Dbxref=NCBI_GP:MCY7217082.1;Name=MCY7217082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933982.1;locus_tag=MK542_02690;product=TfoX/Sxy family protein;protein_id=MCY7217082.1;transl_table=11 JAKUZA010000016.1 Genbank gene 57055 57720 . + . ID=gene-MK542_02695;Name=MK542_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02695 JAKUZA010000016.1 Protein Homology CDS 57055 57720 . + 0 ID=cds-MCY7217083.1;Parent=gene-MK542_02695;Dbxref=NCBI_GP:MCY7217083.1;Name=MCY7217083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915407.1;locus_tag=MK542_02695;product=SatD family protein;protein_id=MCY7217083.1;transl_table=11 JAKUZA010000016.1 Genbank gene 57717 58454 . + . ID=gene-MK542_02700;Name=MK542_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02700 JAKUZA010000016.1 Protein Homology CDS 57717 58454 . + 0 ID=cds-MCY7217084.1;Parent=gene-MK542_02700;Dbxref=NCBI_GP:MCY7217084.1;Name=MCY7217084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904336.1;locus_tag=MK542_02700;product=DUF3307 domain-containing protein;protein_id=MCY7217084.1;transl_table=11 JAKUZA010000016.1 Genbank gene 58530 59114 . + . ID=gene-MK542_02705;Name=MK542_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02705 JAKUZA010000016.1 Protein Homology CDS 58530 59114 . + 0 ID=cds-MCY7217085.1;Parent=gene-MK542_02705;Dbxref=NCBI_GP:MCY7217085.1;Name=MCY7217085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590302.1;locus_tag=MK542_02705;product=GrpB family protein;protein_id=MCY7217085.1;transl_table=11 JAKUZA010000016.1 Genbank gene 59426 60562 . + . ID=gene-MK542_02710;Name=MK542_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02710 JAKUZA010000016.1 Protein Homology CDS 59426 60562 . + 0 ID=cds-MCY7217086.1;Parent=gene-MK542_02710;Dbxref=NCBI_GP:MCY7217086.1;Name=MCY7217086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933553.1;locus_tag=MK542_02710;product=hypothetical protein;protein_id=MCY7217086.1;transl_table=11 JAKUZA010000016.1 Genbank gene 60588 62309 . + . ID=gene-MK542_02715;Name=MK542_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02715 JAKUZA010000016.1 Protein Homology CDS 60588 62309 . + 0 ID=cds-MCY7217087.1;Parent=gene-MK542_02715;Dbxref=NCBI_GP:MCY7217087.1;Name=MCY7217087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902993.1;locus_tag=MK542_02715;product=hypothetical protein;protein_id=MCY7217087.1;transl_table=11 JAKUZA010000016.1 Genbank gene 62313 63092 . + . ID=gene-MK542_02720;Name=MK542_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02720 JAKUZA010000016.1 Protein Homology CDS 62313 63092 . + 0 ID=cds-MCY7217088.1;Parent=gene-MK542_02720;Dbxref=NCBI_GP:MCY7217088.1;Name=MCY7217088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009731172.1;locus_tag=MK542_02720;product=M15 family metallopeptidase;protein_id=MCY7217088.1;transl_table=11 JAKUZA010000016.1 Genbank gene 63321 63563 . - . ID=gene-MK542_02725;Name=MK542_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02725 JAKUZA010000016.1 Protein Homology CDS 63321 63563 . - 0 ID=cds-MCY7217089.1;Parent=gene-MK542_02725;Dbxref=NCBI_GP:MCY7217089.1;Name=MCY7217089.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887852.1;locus_tag=MK542_02725;product=type B 50S ribosomal protein L31;protein_id=MCY7217089.1;transl_table=11 JAKUZA010000016.1 Genbank gene 63669 64604 . - . ID=gene-MK542_02730;Name=MK542_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02730 JAKUZA010000016.1 Protein Homology CDS 63669 64604 . - 0 ID=cds-MCY7217090.1;Parent=gene-MK542_02730;Dbxref=NCBI_GP:MCY7217090.1;Name=MCY7217090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895375.1;locus_tag=MK542_02730;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=MCY7217090.1;transl_table=11 JAKUZA010000016.1 Genbank gene 64710 65150 . + . ID=gene-MK542_02735;Name=MK542_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02735 JAKUZA010000016.1 Protein Homology CDS 64710 65150 . + 0 ID=cds-MCY7217091.1;Parent=gene-MK542_02735;Dbxref=NCBI_GP:MCY7217091.1;Name=MCY7217091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915076.1;locus_tag=MK542_02735;product=flavodoxin;protein_id=MCY7217091.1;transl_table=11 JAKUZA010000016.1 Genbank gene 65275 66657 . + . ID=gene-MK542_02740;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=MK542_02740 JAKUZA010000016.1 Protein Homology CDS 65275 66657 . + 0 ID=cds-MCY7217092.1;Parent=gene-MK542_02740;Dbxref=NCBI_GP:MCY7217092.1;Name=MCY7217092.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263153.1;locus_tag=MK542_02740;product=Fe-S cluster assembly protein SufB;protein_id=MCY7217092.1;transl_table=11 JAKUZA010000016.1 Genbank gene 66939 67205 . + . ID=gene-MK542_02745;Name=MK542_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02745 JAKUZA010000016.1 Protein Homology CDS 66939 67205 . + 0 ID=cds-MCY7217093.1;Parent=gene-MK542_02745;Dbxref=NCBI_GP:MCY7217093.1;Name=MCY7217093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518685.1;locus_tag=MK542_02745;product=chorismate mutase;protein_id=MCY7217093.1;transl_table=11 JAKUZA010000016.1 Genbank gene 67202 67576 . + . ID=gene-MK542_02750;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=MK542_02750 JAKUZA010000016.1 Protein Homology CDS 67202 67576 . + 0 ID=cds-MCY7217094.1;Parent=gene-MK542_02750;Dbxref=NCBI_GP:MCY7217094.1;Name=MCY7217094.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912583.1;locus_tag=MK542_02750;product=fluoride efflux transporter CrcB;protein_id=MCY7217094.1;transl_table=11 JAKUZA010000016.1 Genbank gene 67573 67772 . + . ID=gene-MK542_02755;Name=crcB;end_range=67772,.;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=MK542_02755;partial=true JAKUZA010000016.1 Protein Homology CDS 67573 67772 . + 0 ID=cds-MCY7217095.1;Parent=gene-MK542_02755;Dbxref=NCBI_GP:MCY7217095.1;Name=MCY7217095.1;end_range=67772,.;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900257.1;locus_tag=MK542_02755;partial=true;product=fluoride efflux transporter CrcB;protein_id=MCY7217095.1;transl_table=11 JAKUZA010000016.1 Genbank gene 67786 67899 . + . ID=gene-MK542_02760;Name=MK542_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02760;partial=true;start_range=.,67786 JAKUZA010000016.1 Protein Homology CDS 67786 67899 . + 0 ID=cds-MCY7217096.1;Parent=gene-MK542_02760;Dbxref=NCBI_GP:MCY7217096.1;Name=MCY7217096.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900257.1;locus_tag=MK542_02760;partial=true;product=camphor resistance protein CrcB;protein_id=MCY7217096.1;start_range=.,67786;transl_table=11 JAKUZA010000016.1 Genbank gene 68018 68365 . + . ID=gene-MK542_02765;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=MK542_02765 JAKUZA010000016.1 Protein Homology CDS 68018 68365 . + 0 ID=cds-MCY7217097.1;Parent=gene-MK542_02765;Dbxref=NCBI_GP:MCY7217097.1;Name=MCY7217097.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=MK542_02765;product=50S ribosomal protein L19;protein_id=MCY7217097.1;transl_table=11 JAKUZA010000016.1 Genbank gene 68406 68477 . + . ID=gene-MK542_02770;Name=MK542_02770;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_02770 JAKUZA010000016.1 tRNAscan-SE tRNA 68406 68477 . + . ID=rna-MK542_02770;Parent=gene-MK542_02770;anticodon=(pos:68439..68441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02770;product=tRNA-Arg JAKUZA010000016.1 tRNAscan-SE exon 68406 68477 . + . ID=exon-MK542_02770-1;Parent=rna-MK542_02770;anticodon=(pos:68439..68441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02770;product=tRNA-Arg JAKUZA010000016.1 Genbank gene 69029 72412 . + . ID=gene-MK542_02775;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;locus_tag=MK542_02775 JAKUZA010000016.1 Protein Homology CDS 69029 72412 . + 0 ID=cds-MCY7217098.1;Parent=gene-MK542_02775;Dbxref=NCBI_GP:MCY7217098.1;Name=MCY7217098.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520,GO:0005575;gbkey=CDS;gene=cas9;go_component=cellular_component|0005575||IEA;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287009.1;locus_tag=MK542_02775;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=MCY7217098.1;transl_table=11 JAKUZA010000016.1 Genbank gene 72573 73484 . + . ID=gene-MK542_02780;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=MK542_02780 JAKUZA010000016.1 Protein Homology CDS 72573 73484 . + 0 ID=cds-MCY7217099.1;Parent=gene-MK542_02780;Dbxref=NCBI_GP:MCY7217099.1;Name=MCY7217099.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372381.1;locus_tag=MK542_02780;product=type II CRISPR-associated endonuclease Cas1;protein_id=MCY7217099.1;transl_table=11 JAKUZA010000016.1 Genbank gene 73486 73809 . + . ID=gene-MK542_02785;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=MK542_02785 JAKUZA010000016.1 Protein Homology CDS 73486 73809 . + 0 ID=cds-MCY7217100.1;Parent=gene-MK542_02785;Dbxref=NCBI_GP:MCY7217100.1;Name=MCY7217100.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268300.1;locus_tag=MK542_02785;product=CRISPR-associated endonuclease Cas2;protein_id=MCY7217100.1;transl_table=11 JAKUZA010000016.1 Genbank gene 73806 74849 . + . ID=gene-MK542_02790;Name=MK542_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02790 JAKUZA010000016.1 Protein Homology CDS 73806 74849 . + 0 ID=cds-MCY7217101.1;Parent=gene-MK542_02790;Dbxref=NCBI_GP:MCY7217101.1;Name=MCY7217101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024645.1;locus_tag=MK542_02790;product=CRISPR-associated protein Cas7;protein_id=MCY7217101.1;transl_table=11 JAKUZA010000016.1 Genbank direct_repeat 74920 76075 . + . ID=id-JAKUZA010000016.1:74920..76075;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=74920..74955;rpt_unit_seq=gtttttgtactctcaagatttaagtaactgtacaac JAKUZA010000016.1 Genbank gene 76211 76597 . + . ID=gene-MK542_02795;Name=MK542_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02795 JAKUZA010000016.1 Protein Homology CDS 76211 76597 . + 0 ID=cds-MCY7217102.1;Parent=gene-MK542_02795;Dbxref=NCBI_GP:MCY7217102.1;Name=MCY7217102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900601.1;locus_tag=MK542_02795;product=YbgA family protein;protein_id=MCY7217102.1;transl_table=11 JAKUZA010000016.1 Genbank gene 76762 77175 . + . ID=gene-MK542_02800;Name=MK542_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02800 JAKUZA010000016.1 Protein Homology CDS 76762 77175 . + 0 ID=cds-MCY7217103.1;Parent=gene-MK542_02800;Dbxref=NCBI_GP:MCY7217103.1;Name=MCY7217103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917416.1;locus_tag=MK542_02800;product=SP_0198 family lipoprotein;protein_id=MCY7217103.1;transl_table=11 JAKUZA010000016.1 Genbank gene 77439 78500 . + . ID=gene-MK542_02805;Name=MK542_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02805 JAKUZA010000016.1 Protein Homology CDS 77439 78500 . + 0 ID=cds-MCY7217104.1;Parent=gene-MK542_02805;Dbxref=NCBI_GP:MCY7217104.1;Name=MCY7217104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187316.1;locus_tag=MK542_02805;product=ABC transporter permease;protein_id=MCY7217104.1;transl_table=11 JAKUZA010000016.1 Genbank gene 78501 79166 . + . ID=gene-MK542_02810;Name=MK542_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02810 JAKUZA010000016.1 Protein Homology CDS 78501 79166 . + 0 ID=cds-MCY7217105.1;Parent=gene-MK542_02810;Dbxref=NCBI_GP:MCY7217105.1;Name=MCY7217105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895797.1;locus_tag=MK542_02810;product=ABC transporter ATP-binding protein;protein_id=MCY7217105.1;transl_table=11 JAKUZA010000016.1 Genbank gene 79274 79459 . - . ID=gene-MK542_02815;Name=MK542_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02815 JAKUZA010000016.1 Protein Homology CDS 79274 79459 . - 0 ID=cds-MCY7217106.1;Parent=gene-MK542_02815;Dbxref=NCBI_GP:MCY7217106.1;Name=MCY7217106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589621.1;locus_tag=MK542_02815;product=hypothetical protein;protein_id=MCY7217106.1;transl_table=11 JAKUZA010000016.1 Genbank gene 79461 80834 . - . ID=gene-MK542_02820;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=MK542_02820 JAKUZA010000016.1 Protein Homology CDS 79461 80834 . - 0 ID=cds-MCY7217107.1;Parent=gene-MK542_02820;Dbxref=NCBI_GP:MCY7217107.1;Name=MCY7217107.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906470.1;locus_tag=MK542_02820;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MCY7217107.1;transl_table=11 JAKUZA010000016.1 Genbank gene 81030 81707 . + . ID=gene-MK542_02825;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=MK542_02825 JAKUZA010000016.1 Protein Homology CDS 81030 81707 . + 0 ID=cds-MCY7217108.1;Parent=gene-MK542_02825;Dbxref=NCBI_GP:MCY7217108.1;Name=MCY7217108.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912576.1;locus_tag=MK542_02825;product=ribose-5-phosphate isomerase RpiA;protein_id=MCY7217108.1;transl_table=11 JAKUZA010000016.1 Genbank gene 81721 82932 . + . ID=gene-MK542_02830;Name=MK542_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02830 JAKUZA010000016.1 Protein Homology CDS 81721 82932 . + 0 ID=cds-MCY7217109.1;Parent=gene-MK542_02830;Dbxref=NCBI_GP:MCY7217109.1;Name=MCY7217109.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917154.1;locus_tag=MK542_02830;product=phosphopentomutase;protein_id=MCY7217109.1;transl_table=11 JAKUZA010000016.1 Genbank gene 82962 83774 . + . ID=gene-MK542_02835;Name=MK542_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02835 JAKUZA010000016.1 Protein Homology CDS 82962 83774 . + 0 ID=cds-MCY7217110.1;Parent=gene-MK542_02835;Dbxref=NCBI_GP:MCY7217110.1;Name=MCY7217110.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917155.1;locus_tag=MK542_02835;product=purine-nucleoside phosphorylase;protein_id=MCY7217110.1;transl_table=11 JAKUZA010000016.1 Genbank gene 83768 85057 . + . ID=gene-MK542_02840;Name=MK542_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02840 JAKUZA010000016.1 Protein Homology CDS 83768 85057 . + 0 ID=cds-MCY7217111.1;Parent=gene-MK542_02840;Dbxref=NCBI_GP:MCY7217111.1;Name=MCY7217111.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148724.1;locus_tag=MK542_02840;product=chloride channel protein;protein_id=MCY7217111.1;transl_table=11 JAKUZA010000016.1 Genbank gene 85273 85980 . + . ID=gene-MK542_02845;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=MK542_02845 JAKUZA010000016.1 Protein Homology CDS 85273 85980 . + 0 ID=cds-MCY7217112.1;Parent=gene-MK542_02845;Dbxref=NCBI_GP:MCY7217112.1;Name=MCY7217112.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604594.1;locus_tag=MK542_02845;product=purine-nucleoside phosphorylase;protein_id=MCY7217112.1;transl_table=11 JAKUZA010000016.1 Genbank gene 85983 86786 . + . ID=gene-MK542_02850;Name=MK542_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02850 JAKUZA010000016.1 Protein Homology CDS 85983 86786 . + 0 ID=cds-MCY7217113.1;Parent=gene-MK542_02850;Dbxref=NCBI_GP:MCY7217113.1;Name=MCY7217113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589630.1;locus_tag=MK542_02850;product=hypothetical protein;protein_id=MCY7217113.1;transl_table=11 JAKUZA010000016.1 Genbank gene 86752 87489 . + . ID=gene-MK542_02855;Name=MK542_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02855 JAKUZA010000016.1 Protein Homology CDS 86752 87489 . + 0 ID=cds-MCY7217114.1;Parent=gene-MK542_02855;Dbxref=NCBI_GP:MCY7217114.1;Name=MCY7217114.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604596.1;locus_tag=MK542_02855;product=NAD-dependent protein deacylase;protein_id=MCY7217114.1;transl_table=11 JAKUZA010000016.1 Genbank pseudogene 87602 88557 . + . ID=gene-MK542_02860;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=pseudogene;locus_tag=MK542_02860;pseudo=true JAKUZA010000016.1 Protein Homology CDS 87602 88557 . + 0 ID=cds-MK542_02860;Parent=gene-MK542_02860;Note=frameshifted;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF013984.2;locus_tag=MK542_02860;product=CRISPR-associated endonuclease Cas1;pseudo=true;transl_table=11 JAKUZA010000016.1 Genbank gene 88544 88870 . + . ID=gene-MK542_02865;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=MK542_02865 JAKUZA010000016.1 Protein Homology CDS 88544 88870 . + 0 ID=cds-MCY7217115.1;Parent=gene-MK542_02865;Dbxref=NCBI_GP:MCY7217115.1;Name=MCY7217115.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604598.1;locus_tag=MK542_02865;product=CRISPR-associated endonuclease Cas2;protein_id=MCY7217115.1;transl_table=11 JAKUZA010000016.1 Genbank gene 89888 90622 . + . ID=gene-MK542_02870;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=MK542_02870 JAKUZA010000016.1 Protein Homology CDS 89888 90622 . + 0 ID=cds-MCY7217116.1;Parent=gene-MK542_02870;Dbxref=NCBI_GP:MCY7217116.1;Name=MCY7217116.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604600.1;locus_tag=MK542_02870;product=CRISPR-associated endoribonuclease Cas6;protein_id=MCY7217116.1;transl_table=11 JAKUZA010000016.1 Genbank gene 90747 91655 . - . ID=gene-MK542_02875;Name=MK542_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02875 JAKUZA010000016.1 Protein Homology CDS 90747 91655 . - 0 ID=cds-MCY7217117.1;Parent=gene-MK542_02875;Dbxref=NCBI_GP:MCY7217117.1;Name=MCY7217117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076507.1;locus_tag=MK542_02875;product=LysR family transcriptional regulator;protein_id=MCY7217117.1;transl_table=11 JAKUZA010000016.1 Genbank gene 91839 92645 . + . ID=gene-MK542_02880;Name=MK542_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02880 JAKUZA010000016.1 Protein Homology CDS 91839 92645 . + 0 ID=cds-MCY7217118.1;Parent=gene-MK542_02880;Dbxref=NCBI_GP:MCY7217118.1;Name=MCY7217118.1;Ontology_term=GO:0006221,GO:0016491,GO:0050660,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917172.1;locus_tag=MK542_02880;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=MCY7217118.1;transl_table=11 JAKUZA010000016.1 Genbank gene 92658 93596 . + . ID=gene-MK542_02885;Name=MK542_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02885 JAKUZA010000016.1 Protein Homology CDS 92658 93596 . + 0 ID=cds-MCY7217119.1;Parent=gene-MK542_02885;Dbxref=NCBI_GP:MCY7217119.1;Name=MCY7217119.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921080.1;locus_tag=MK542_02885;product=dihydroorotate dehydrogenase;protein_id=MCY7217119.1;transl_table=11 JAKUZA010000016.1 Genbank gene 93802 94494 . + . ID=gene-MK542_02890;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=MK542_02890 JAKUZA010000016.1 Protein Homology CDS 93802 94494 . + 0 ID=cds-MCY7217120.1;Parent=gene-MK542_02890;Dbxref=NCBI_GP:MCY7217120.1;Name=MCY7217120.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933637.1;locus_tag=MK542_02890;product=orotidine-5'-phosphate decarboxylase;protein_id=MCY7217120.1;transl_table=11 JAKUZA010000016.1 Genbank gene 94570 95199 . + . ID=gene-MK542_02895;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=MK542_02895 JAKUZA010000016.1 Protein Homology CDS 94570 95199 . + 0 ID=cds-MCY7217121.1;Parent=gene-MK542_02895;Dbxref=NCBI_GP:MCY7217121.1;Name=MCY7217121.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589648.1;locus_tag=MK542_02895;product=orotate phosphoribosyltransferase;protein_id=MCY7217121.1;transl_table=11 JAKUZA010000016.1 Genbank gene 95313 96842 . + . ID=gene-MK542_02900;Name=MK542_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02900 JAKUZA010000016.1 Protein Homology CDS 95313 96842 . + 0 ID=cds-MCY7217122.1;Parent=gene-MK542_02900;Dbxref=NCBI_GP:MCY7217122.1;Name=MCY7217122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895414.1;locus_tag=MK542_02900;product=glycosyltransferase family 39 protein;protein_id=MCY7217122.1;transl_table=11 JAKUZA010000016.1 Genbank gene 96909 97562 . + . ID=gene-MK542_02905;Name=MK542_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02905 JAKUZA010000016.1 Protein Homology CDS 96909 97562 . + 0 ID=cds-MCY7217123.1;Parent=gene-MK542_02905;Dbxref=NCBI_GP:MCY7217123.1;Name=MCY7217123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921088.1;locus_tag=MK542_02905;product=uracil-DNA glycosylase;protein_id=MCY7217123.1;transl_table=11 JAKUZA010000016.1 Genbank gene 97571 98035 . + . ID=gene-MK542_02910;Name=MK542_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02910 JAKUZA010000016.1 Protein Homology CDS 97571 98035 . + 0 ID=cds-MCY7217124.1;Parent=gene-MK542_02910;Dbxref=NCBI_GP:MCY7217124.1;Name=MCY7217124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003012002.1;locus_tag=MK542_02910;product=8-oxo-dGTP diphosphatase;protein_id=MCY7217124.1;transl_table=11 JAKUZA010000016.1 Genbank gene 98048 99316 . + . ID=gene-MK542_02915;Name=MK542_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02915 JAKUZA010000016.1 Protein Homology CDS 98048 99316 . + 0 ID=cds-MCY7217125.1;Parent=gene-MK542_02915;Dbxref=NCBI_GP:MCY7217125.1;Name=MCY7217125.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604615.1;locus_tag=MK542_02915;product=dihydroorotase;protein_id=MCY7217125.1;transl_table=11 JAKUZA010000016.1 Genbank gene 99475 101607 . + . ID=gene-MK542_02920;Name=nt5e;gbkey=Gene;gene=nt5e;gene_biotype=protein_coding;locus_tag=MK542_02920 JAKUZA010000016.1 Protein Homology CDS 99475 101607 . + 0 ID=cds-MCY7217126.1;Parent=gene-MK542_02920;Dbxref=NCBI_GP:MCY7217126.1;Name=MCY7217126.1;gbkey=CDS;gene=nt5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042507.1;locus_tag=MK542_02920;product=cell surface ecto-5'-nucleotidase Nt5e;protein_id=MCY7217126.1;transl_table=11 JAKUZA010000016.1 Genbank gene 101788 102432 . - . ID=gene-MK542_02925;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=MK542_02925 JAKUZA010000016.1 Protein Homology CDS 101788 102432 . - 0 ID=cds-MCY7217127.1;Parent=gene-MK542_02925;Dbxref=NCBI_GP:MCY7217127.1;Name=MCY7217127.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906497.1;locus_tag=MK542_02925;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=MCY7217127.1;transl_table=11 JAKUZA010000016.1 Genbank gene 102655 104598 . + . ID=gene-MK542_02930;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=MK542_02930 JAKUZA010000016.1 Protein Homology CDS 102655 104598 . + 0 ID=cds-MCY7217128.1;Parent=gene-MK542_02930;Dbxref=NCBI_GP:MCY7217128.1;Name=MCY7217128.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604618.1;locus_tag=MK542_02930;product=DNA topoisomerase IV subunit B;protein_id=MCY7217128.1;transl_table=11 JAKUZA010000016.1 Genbank gene 104617 105459 . + . ID=gene-MK542_02935;Name=MK542_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02935 JAKUZA010000016.1 Protein Homology CDS 104617 105459 . + 0 ID=cds-MCY7217129.1;Parent=gene-MK542_02935;Dbxref=NCBI_GP:MCY7217129.1;Name=MCY7217129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042176.1;locus_tag=MK542_02935;product=hypothetical protein;protein_id=MCY7217129.1;transl_table=11 JAKUZA010000016.1 Genbank gene 105655 106401 . + . ID=gene-MK542_02940;Name=MK542_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02940 JAKUZA010000016.1 Protein Homology CDS 105655 106401 . + 0 ID=cds-MCY7217130.1;Parent=gene-MK542_02940;Dbxref=NCBI_GP:MCY7217130.1;Name=MCY7217130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660449.1;locus_tag=MK542_02940;product=DUF6261 family protein;protein_id=MCY7217130.1;transl_table=11 JAKUZA010000016.1 Genbank gene 106427 107032 . + . ID=gene-MK542_02945;Name=MK542_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02945 JAKUZA010000016.1 Protein Homology CDS 106427 107032 . + 0 ID=cds-MCY7217131.1;Parent=gene-MK542_02945;Dbxref=NCBI_GP:MCY7217131.1;Name=MCY7217131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019319402.1;locus_tag=MK542_02945;product=Fic family protein;protein_id=MCY7217131.1;transl_table=11 JAKUZA010000016.1 Genbank gene 107062 107598 . + . ID=gene-MK542_02950;Name=MK542_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02950 JAKUZA010000016.1 Protein Homology CDS 107062 107598 . + 0 ID=cds-MCY7217132.1;Parent=gene-MK542_02950;Dbxref=NCBI_GP:MCY7217132.1;Name=MCY7217132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921113.1;locus_tag=MK542_02950;product=GNAT family N-acetyltransferase;protein_id=MCY7217132.1;transl_table=11 JAKUZA010000016.1 Genbank gene 107615 108448 . + . ID=gene-MK542_02955;Name=MK542_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02955 JAKUZA010000016.1 Protein Homology CDS 107615 108448 . + 0 ID=cds-MCY7217133.1;Parent=gene-MK542_02955;Dbxref=NCBI_GP:MCY7217133.1;Name=MCY7217133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589664.1;locus_tag=MK542_02955;product=aminoglycoside 6-adenylyltransferase;protein_id=MCY7217133.1;transl_table=11 JAKUZA010000016.1 Genbank gene 108429 109163 . + . ID=gene-MK542_02960;Name=MK542_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02960 JAKUZA010000016.1 Protein Homology CDS 108429 109163 . + 0 ID=cds-MCY7217134.1;Parent=gene-MK542_02960;Dbxref=NCBI_GP:MCY7217134.1;Name=MCY7217134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681815.1;locus_tag=MK542_02960;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217134.1;transl_table=11 JAKUZA010000016.1 Genbank gene 109216 111666 . + . ID=gene-MK542_02965;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=MK542_02965 JAKUZA010000016.1 Protein Homology CDS 109216 111666 . + 0 ID=cds-MCY7217135.1;Parent=gene-MK542_02965;Dbxref=NCBI_GP:MCY7217135.1;Name=MCY7217135.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809184.1;locus_tag=MK542_02965;product=DNA topoisomerase IV subunit A;protein_id=MCY7217135.1;transl_table=11 JAKUZA010000016.1 Genbank gene 111819 112844 . + . ID=gene-MK542_02970;Name=MK542_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02970 JAKUZA010000016.1 Protein Homology CDS 111819 112844 . + 0 ID=cds-MCY7217136.1;Parent=gene-MK542_02970;Dbxref=NCBI_GP:MCY7217136.1;Name=MCY7217136.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604622.1;locus_tag=MK542_02970;product=branched-chain amino acid aminotransferase;protein_id=MCY7217136.1;transl_table=11 JAKUZA010000016.1 Genbank gene 112937 113167 . + . ID=gene-MK542_02975;Name=MK542_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_02975 JAKUZA010000016.1 Protein Homology CDS 112937 113167 . + 0 ID=cds-MCY7217137.1;Parent=gene-MK542_02975;Dbxref=NCBI_GP:MCY7217137.1;Name=MCY7217137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895433.1;locus_tag=MK542_02975;product=DUF2969 domain-containing protein;protein_id=MCY7217137.1;transl_table=11 JAKUZA010000016.1 Genbank gene 113217 113297 . + . ID=gene-MK542_02980;Name=MK542_02980;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_02980 JAKUZA010000016.1 tRNAscan-SE tRNA 113217 113297 . + . ID=rna-MK542_02980;Parent=gene-MK542_02980;anticodon=(pos:113251..113253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02980;product=tRNA-Tyr JAKUZA010000016.1 tRNAscan-SE exon 113217 113297 . + . ID=exon-MK542_02980-1;Parent=rna-MK542_02980;anticodon=(pos:113251..113253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02980;product=tRNA-Tyr JAKUZA010000016.1 Genbank gene 113347 113418 . + . ID=gene-MK542_02985;Name=MK542_02985;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_02985 JAKUZA010000016.1 tRNAscan-SE tRNA 113347 113418 . + . ID=rna-MK542_02985;Parent=gene-MK542_02985;anticodon=(pos:113379..113381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02985;product=tRNA-Gln JAKUZA010000016.1 tRNAscan-SE exon 113347 113418 . + . ID=exon-MK542_02985-1;Parent=rna-MK542_02985;anticodon=(pos:113379..113381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_02985;product=tRNA-Gln JAKUZA010000016.1 Genbank gene 113582 114784 . + . ID=gene-MK542_02990;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=MK542_02990 JAKUZA010000016.1 Protein Homology CDS 113582 114784 . + 0 ID=cds-MCY7217138.1;Parent=gene-MK542_02990;Dbxref=NCBI_GP:MCY7217138.1;Name=MCY7217138.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=MK542_02990;product=30S ribosomal protein S1;protein_id=MCY7217138.1;transl_table=11 JAKUZA010000016.1 cmsearch sequence_feature 114916 115005 . + . ID=id-JAKUZA010000016.1:114916..115005;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAKUZA010000016.1 Genbank gene 115041 115355 . + . ID=gene-MK542_02995;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=MK542_02995 JAKUZA010000016.1 Protein Homology CDS 115041 115355 . + 0 ID=cds-MCY7217139.1;Parent=gene-MK542_02995;Dbxref=NCBI_GP:MCY7217139.1;Name=MCY7217139.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=MK542_02995;product=50S ribosomal protein L21;protein_id=MCY7217139.1;transl_table=11 JAKUZA010000016.1 Genbank gene 115371 115715 . + . ID=gene-MK542_03000;Name=MK542_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03000 JAKUZA010000016.1 Protein Homology CDS 115371 115715 . + 0 ID=cds-MCY7217140.1;Parent=gene-MK542_03000;Dbxref=NCBI_GP:MCY7217140.1;Name=MCY7217140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613691.1;locus_tag=MK542_03000;product=ribosomal-processing cysteine protease Prp;protein_id=MCY7217140.1;transl_table=11 JAKUZA010000016.1 Genbank gene 115733 116026 . + . ID=gene-MK542_03005;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=MK542_03005 JAKUZA010000016.1 Protein Homology CDS 115733 116026 . + 0 ID=cds-MCY7217141.1;Parent=gene-MK542_03005;Dbxref=NCBI_GP:MCY7217141.1;Name=MCY7217141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=MK542_03005;product=50S ribosomal protein L27;protein_id=MCY7217141.1;transl_table=11 JAKUZA010000016.1 Genbank gene 116189 118168 . + . ID=gene-MK542_03010;Name=MK542_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03010 JAKUZA010000016.1 Protein Homology CDS 116189 118168 . + 0 ID=cds-MCY7217142.1;Parent=gene-MK542_03010;Dbxref=NCBI_GP:MCY7217142.1;Name=MCY7217142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=MK542_03010;product=NACHT domain-containing protein;protein_id=MCY7217142.1;transl_table=11 JAKUZA010000016.1 Genbank gene 118272 118577 . + . ID=gene-MK542_03015;Name=MK542_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03015 JAKUZA010000016.1 Protein Homology CDS 118272 118577 . + 0 ID=cds-MCY7217143.1;Parent=gene-MK542_03015;Dbxref=NCBI_GP:MCY7217143.1;Name=MCY7217143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011365.1;locus_tag=MK542_03015;product=rhodanese-like domain-containing protein;protein_id=MCY7217143.1;transl_table=11 JAKUZA010000016.1 Genbank gene 118595 120247 . + . ID=gene-MK542_03020;Name=MK542_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03020 JAKUZA010000016.1 Protein Homology CDS 118595 120247 . + 0 ID=cds-MCY7217144.1;Parent=gene-MK542_03020;Dbxref=NCBI_GP:MCY7217144.1;Name=MCY7217144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605029.1;locus_tag=MK542_03020;product=FAD-dependent oxidoreductase;protein_id=MCY7217144.1;transl_table=11 JAKUZA010000016.1 Genbank gene 120244 120537 . + . ID=gene-MK542_03025;Name=MK542_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03025 JAKUZA010000016.1 Protein Homology CDS 120244 120537 . + 0 ID=cds-MCY7217145.1;Parent=gene-MK542_03025;Dbxref=NCBI_GP:MCY7217145.1;Name=MCY7217145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450185.1;locus_tag=MK542_03025;product=rhodanese-like domain-containing protein;protein_id=MCY7217145.1;transl_table=11 JAKUZA010000016.1 Genbank gene 120588 121076 . - . ID=gene-MK542_03030;Name=MK542_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03030 JAKUZA010000016.1 Protein Homology CDS 120588 121076 . - 0 ID=cds-MCY7217146.1;Parent=gene-MK542_03030;Dbxref=NCBI_GP:MCY7217146.1;Name=MCY7217146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032586.1;locus_tag=MK542_03030;product=prolyl-tRNA synthetase associated domain-containing protein;protein_id=MCY7217146.1;transl_table=11 JAKUZA010000016.1 Genbank gene 121195 121452 . - . ID=gene-MK542_03035;Name=MK542_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03035 JAKUZA010000016.1 Protein Homology CDS 121195 121452 . - 0 ID=cds-MCY7217147.1;Parent=gene-MK542_03035;Dbxref=NCBI_GP:MCY7217147.1;Name=MCY7217147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845567.1;locus_tag=MK542_03035;product=metal-sensitive transcriptional regulator;protein_id=MCY7217147.1;transl_table=11 JAKUZA010000016.1 Genbank gene 121650 123626 . + . ID=gene-MK542_03040;Name=MK542_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03040 JAKUZA010000016.1 Protein Homology CDS 121650 123626 . + 0 ID=cds-MCY7217148.1;Parent=gene-MK542_03040;Dbxref=NCBI_GP:MCY7217148.1;Name=MCY7217148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191422.1;locus_tag=MK542_03040;product=peptide ABC transporter substrate-binding protein;protein_id=MCY7217148.1;transl_table=11 JAKUZA010000016.1 Genbank gene 123844 124443 . + . ID=gene-MK542_03045;Name=MK542_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03045 JAKUZA010000016.1 Protein Homology CDS 123844 124443 . + 0 ID=cds-MCY7217149.1;Parent=gene-MK542_03045;Dbxref=NCBI_GP:MCY7217149.1;Name=MCY7217149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903074.1;locus_tag=MK542_03045;product=hypothetical protein;protein_id=MCY7217149.1;transl_table=11 JAKUZA010000016.1 Genbank gene 124534 125394 . + . ID=gene-MK542_03050;Name=MK542_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03050 JAKUZA010000016.1 Protein Homology CDS 124534 125394 . + 0 ID=cds-MCY7217150.1;Parent=gene-MK542_03050;Dbxref=NCBI_GP:MCY7217150.1;Name=MCY7217150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659450.1;locus_tag=MK542_03050;product=GNAT family N-acetyltransferase;protein_id=MCY7217150.1;transl_table=11 JAKUZA010000016.1 Genbank gene 125460 126092 . + . ID=gene-MK542_03055;Name=MK542_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03055 JAKUZA010000016.1 Protein Homology CDS 125460 126092 . + 0 ID=cds-MCY7217151.1;Parent=gene-MK542_03055;Dbxref=NCBI_GP:MCY7217151.1;Name=MCY7217151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638771.1;locus_tag=MK542_03055;product=copper homeostasis protein CutC;protein_id=MCY7217151.1;transl_table=11 JAKUZA010000016.1 Genbank gene 126104 126775 . + . ID=gene-MK542_03060;Name=MK542_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03060 JAKUZA010000016.1 Protein Homology CDS 126104 126775 . + 0 ID=cds-MCY7217152.1;Parent=gene-MK542_03060;Dbxref=NCBI_GP:MCY7217152.1;Name=MCY7217152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930844.1;locus_tag=MK542_03060;product=MmcQ/YjbR family DNA-binding protein;protein_id=MCY7217152.1;transl_table=11 JAKUZA010000016.1 Genbank gene 126888 128636 . + . ID=gene-MK542_03065;Name=MK542_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03065 JAKUZA010000016.1 Protein Homology CDS 126888 128636 . + 0 ID=cds-MCY7217153.1;Parent=gene-MK542_03065;Dbxref=NCBI_GP:MCY7217153.1;Name=MCY7217153.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590189.1;locus_tag=MK542_03065;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217153.1;transl_table=11 JAKUZA010000016.1 Genbank gene 128633 130372 . + . ID=gene-MK542_03070;Name=MK542_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03070 JAKUZA010000016.1 Protein Homology CDS 128633 130372 . + 0 ID=cds-MCY7217154.1;Parent=gene-MK542_03070;Dbxref=NCBI_GP:MCY7217154.1;Name=MCY7217154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914919.1;locus_tag=MK542_03070;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7217154.1;transl_table=11 JAKUZA010000016.1 Genbank gene 130542 131849 . - . ID=gene-MK542_03075;Name=MK542_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03075 JAKUZA010000016.1 Protein Homology CDS 130542 131849 . - 0 ID=cds-MCY7217155.1;Parent=gene-MK542_03075;Dbxref=NCBI_GP:MCY7217155.1;Name=MCY7217155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592020.1;locus_tag=MK542_03075;product=PLP-dependent aminotransferase family protein;protein_id=MCY7217155.1;transl_table=11 JAKUZA010000016.1 Genbank gene 131990 132502 . - . ID=gene-MK542_03080;Name=MK542_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03080 JAKUZA010000016.1 Protein Homology CDS 131990 132502 . - 0 ID=cds-MCY7217156.1;Parent=gene-MK542_03080;Dbxref=NCBI_GP:MCY7217156.1;Name=MCY7217156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592025.1;locus_tag=MK542_03080;product=transcription repressor NadR;protein_id=MCY7217156.1;transl_table=11 JAKUZA010000016.1 Genbank gene 132541 133065 . - . ID=gene-MK542_03085;Name=MK542_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03085 JAKUZA010000016.1 Protein Homology CDS 132541 133065 . - 0 ID=cds-MCY7217157.1;Parent=gene-MK542_03085;Dbxref=NCBI_GP:MCY7217157.1;Name=MCY7217157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590196.1;locus_tag=MK542_03085;product=hypothetical protein;protein_id=MCY7217157.1;transl_table=11 JAKUZA010000016.1 Genbank gene 133275 133613 . + . ID=gene-MK542_03090;Name=MK542_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03090 JAKUZA010000016.1 Protein Homology CDS 133275 133613 . + 0 ID=cds-MCY7217158.1;Parent=gene-MK542_03090;Dbxref=NCBI_GP:MCY7217158.1;Name=MCY7217158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920966.1;locus_tag=MK542_03090;product=alkylphosphonate utilization protein;protein_id=MCY7217158.1;transl_table=11 JAKUZA010000016.1 Genbank gene 133622 134251 . + . ID=gene-MK542_03095;Name=MK542_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03095 JAKUZA010000016.1 Protein Homology CDS 133622 134251 . + 0 ID=cds-MCY7217159.1;Parent=gene-MK542_03095;Dbxref=NCBI_GP:MCY7217159.1;Name=MCY7217159.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659514.1;locus_tag=MK542_03095;product=Pr6Pr family membrane protein;protein_id=MCY7217159.1;transl_table=11 JAKUZA010000016.1 Genbank gene 134386 136983 . + . ID=gene-MK542_03100;Name=MK542_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03100 JAKUZA010000016.1 Protein Homology CDS 134386 136983 . + 0 ID=cds-MCY7217160.1;Parent=gene-MK542_03100;Dbxref=NCBI_GP:MCY7217160.1;Name=MCY7217160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895268.1;locus_tag=MK542_03100;product=pneumococcal-type histidine triad protein;protein_id=MCY7217160.1;transl_table=11 JAKUZA010000016.1 Genbank gene 137215 137742 . + . ID=gene-MK542_03105;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=MK542_03105 JAKUZA010000016.1 Protein Homology CDS 137215 137742 . + 0 ID=cds-MCY7217161.1;Parent=gene-MK542_03105;Dbxref=NCBI_GP:MCY7217161.1;Name=MCY7217161.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590199.1;locus_tag=MK542_03105;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=MCY7217161.1;transl_table=11 JAKUZA010000016.1 Genbank gene 137739 139019 . + . ID=gene-MK542_03110;Name=MK542_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03110 JAKUZA010000016.1 Protein Homology CDS 137739 139019 . + 0 ID=cds-MCY7217162.1;Parent=gene-MK542_03110;Dbxref=NCBI_GP:MCY7217162.1;Name=MCY7217162.1;Ontology_term=GO:0015851,GO:0015205,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930732.1;locus_tag=MK542_03110;product=NCS2 family nucleobase:cation symporter;protein_id=MCY7217162.1;transl_table=11 JAKUZA010000016.1 Genbank gene 139076 139993 . + . ID=gene-MK542_03115;Name=MK542_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03115 JAKUZA010000016.1 Protein Homology CDS 139076 139993 . + 0 ID=cds-MCY7217163.1;Parent=gene-MK542_03115;Dbxref=NCBI_GP:MCY7217163.1;Name=MCY7217163.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918875.1;locus_tag=MK542_03115;product=aspartate carbamoyltransferase catalytic subunit;protein_id=MCY7217163.1;transl_table=11 JAKUZA010000016.1 Genbank gene 140147 141238 . + . ID=gene-MK542_03120;Name=MK542_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03120 JAKUZA010000016.1 Protein Homology CDS 140147 141238 . + 0 ID=cds-MCY7217164.1;Parent=gene-MK542_03120;Dbxref=NCBI_GP:MCY7217164.1;Name=MCY7217164.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002963342.1;locus_tag=MK542_03120;product=carbamoyl phosphate synthase small subunit;protein_id=MCY7217164.1;transl_table=11 JAKUZA010000016.1 Genbank gene 141327 144506 . + . ID=gene-MK542_03125;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=MK542_03125 JAKUZA010000016.1 Protein Homology CDS 141327 144506 . + 0 ID=cds-MCY7217165.1;Parent=gene-MK542_03125;Dbxref=NCBI_GP:MCY7217165.1;Name=MCY7217165.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803305.1;locus_tag=MK542_03125;product=carbamoyl-phosphate synthase large subunit;protein_id=MCY7217165.1;transl_table=11 JAKUZA010000016.1 Genbank gene 144621 144827 . + . ID=gene-MK542_03130;Name=MK542_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03130 JAKUZA010000016.1 GeneMarkS-2+ CDS 144621 144827 . + 0 ID=cds-MCY7217166.1;Parent=gene-MK542_03130;Dbxref=NCBI_GP:MCY7217166.1;Name=MCY7217166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_03130;product=hypothetical protein;protein_id=MCY7217166.1;transl_table=11 ##sequence-region JAKUZA010000017.1 1 41855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000017.1 Genbank region 1 41855 . + . ID=JAKUZA010000017.1:1..41855;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000017.1 Genbank gene 557 1738 . - . ID=gene-MK542_03135;Name=MK542_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03135 JAKUZA010000017.1 Protein Homology CDS 557 1738 . - 0 ID=cds-MCY7217167.1;Parent=gene-MK542_03135;Dbxref=NCBI_GP:MCY7217167.1;Name=MCY7217167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605358.1;locus_tag=MK542_03135;product=bacteriophage abortive infection AbiH family protein;protein_id=MCY7217167.1;transl_table=11 JAKUZA010000017.1 Genbank gene 1831 2583 . - . ID=gene-MK542_03140;Name=MK542_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03140 JAKUZA010000017.1 Protein Homology CDS 1831 2583 . - 0 ID=cds-MCY7217168.1;Parent=gene-MK542_03140;Dbxref=NCBI_GP:MCY7217168.1;Name=MCY7217168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161227.1;locus_tag=MK542_03140;product=DUF6261 family protein;protein_id=MCY7217168.1;transl_table=11 JAKUZA010000017.1 Genbank gene 2646 2864 . - . ID=gene-MK542_03145;Name=MK542_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03145 JAKUZA010000017.1 GeneMarkS-2+ CDS 2646 2864 . - 0 ID=cds-MCY7217169.1;Parent=gene-MK542_03145;Dbxref=NCBI_GP:MCY7217169.1;Name=MCY7217169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_03145;product=hypothetical protein;protein_id=MCY7217169.1;transl_table=11 JAKUZA010000017.1 Genbank gene 3503 4345 . - . ID=gene-MK542_03150;Name=MK542_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03150 JAKUZA010000017.1 Protein Homology CDS 3503 4345 . - 0 ID=cds-MCY7217170.1;Parent=gene-MK542_03150;Dbxref=NCBI_GP:MCY7217170.1;Name=MCY7217170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837432.1;locus_tag=MK542_03150;product=aldo/keto reductase;protein_id=MCY7217170.1;transl_table=11 JAKUZA010000017.1 Genbank gene 4428 4619 . - . ID=gene-MK542_03155;Name=MK542_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03155 JAKUZA010000017.1 Protein Homology CDS 4428 4619 . - 0 ID=cds-MCY7217171.1;Parent=gene-MK542_03155;Dbxref=NCBI_GP:MCY7217171.1;Name=MCY7217171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918060.1;locus_tag=MK542_03155;product=hypothetical protein;protein_id=MCY7217171.1;transl_table=11 JAKUZA010000017.1 Genbank gene 4945 6096 . - . ID=gene-MK542_03160;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=MK542_03160 JAKUZA010000017.1 Protein Homology CDS 4945 6096 . - 0 ID=cds-MCY7217172.1;Parent=gene-MK542_03160;Dbxref=NCBI_GP:MCY7217172.1;Name=MCY7217172.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927561.1;locus_tag=MK542_03160;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=MCY7217172.1;transl_table=11 JAKUZA010000017.1 Genbank gene 6243 7874 . - . ID=gene-MK542_03165;Name=MK542_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03165 JAKUZA010000017.1 Protein Homology CDS 6243 7874 . - 0 ID=cds-MCY7217173.1;Parent=gene-MK542_03165;Dbxref=NCBI_GP:MCY7217173.1;Name=MCY7217173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251733.1;locus_tag=MK542_03165;product=Na/Pi cotransporter family protein;protein_id=MCY7217173.1;transl_table=11 JAKUZA010000017.1 Genbank gene 8054 8404 . - . ID=gene-MK542_03170;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=MK542_03170 JAKUZA010000017.1 Protein Homology CDS 8054 8404 . - 0 ID=cds-MCY7217174.1;Parent=gene-MK542_03170;Dbxref=NCBI_GP:MCY7217174.1;Name=MCY7217174.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893555.1;locus_tag=MK542_03170;product=30S ribosome-binding factor RbfA;protein_id=MCY7217174.1;transl_table=11 JAKUZA010000017.1 Genbank gene 8570 11371 . - . ID=gene-MK542_03175;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=MK542_03175 JAKUZA010000017.1 Protein Homology CDS 8570 11371 . - 0 ID=cds-MCY7217175.1;Parent=gene-MK542_03175;Dbxref=NCBI_GP:MCY7217175.1;Name=MCY7217175.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896915.1;locus_tag=MK542_03175;product=translation initiation factor IF-2;protein_id=MCY7217175.1;transl_table=11 JAKUZA010000017.1 Genbank gene 11388 11687 . - . ID=gene-MK542_03180;Name=MK542_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03180 JAKUZA010000017.1 Protein Homology CDS 11388 11687 . - 0 ID=cds-MCY7217176.1;Parent=gene-MK542_03180;Dbxref=NCBI_GP:MCY7217176.1;Name=MCY7217176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399195.1;locus_tag=MK542_03180;product=YlxQ-related RNA-binding protein;protein_id=MCY7217176.1;transl_table=11 JAKUZA010000017.1 Genbank gene 11680 11976 . - . ID=gene-MK542_03185;Name=MK542_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03185 JAKUZA010000017.1 Protein Homology CDS 11680 11976 . - 0 ID=cds-MCY7217177.1;Parent=gene-MK542_03185;Dbxref=NCBI_GP:MCY7217177.1;Name=MCY7217177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006531117.1;locus_tag=MK542_03185;product=YlxR family protein;protein_id=MCY7217177.1;transl_table=11 JAKUZA010000017.1 Genbank gene 11988 13202 . - . ID=gene-MK542_03190;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=MK542_03190 JAKUZA010000017.1 Protein Homology CDS 11988 13202 . - 0 ID=cds-MCY7217178.1;Parent=gene-MK542_03190;Dbxref=NCBI_GP:MCY7217178.1;Name=MCY7217178.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590928.1;locus_tag=MK542_03190;product=transcription termination factor NusA;protein_id=MCY7217178.1;transl_table=11 JAKUZA010000017.1 Genbank gene 13255 13743 . - . ID=gene-MK542_03195;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=MK542_03195 JAKUZA010000017.1 Protein Homology CDS 13255 13743 . - 0 ID=cds-MCY7217179.1;Parent=gene-MK542_03195;Dbxref=NCBI_GP:MCY7217179.1;Name=MCY7217179.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224979.1;locus_tag=MK542_03195;product=ribosome maturation factor RimP;protein_id=MCY7217179.1;transl_table=11 JAKUZA010000017.1 Genbank gene 13934 14572 . - . ID=gene-MK542_03200;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=MK542_03200 JAKUZA010000017.1 Protein Homology CDS 13934 14572 . - 0 ID=cds-MCY7217180.1;Parent=gene-MK542_03200;Dbxref=NCBI_GP:MCY7217180.1;Name=MCY7217180.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911262.1;locus_tag=MK542_03200;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=MCY7217180.1;transl_table=11 JAKUZA010000017.1 Genbank gene 14569 15363 . - . ID=gene-MK542_03205;Name=MK542_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03205 JAKUZA010000017.1 Protein Homology CDS 14569 15363 . - 0 ID=cds-MCY7217181.1;Parent=gene-MK542_03205;Dbxref=NCBI_GP:MCY7217181.1;Name=MCY7217181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911261.1;locus_tag=MK542_03205;product=phosphotransferase family protein;protein_id=MCY7217181.1;transl_table=11 JAKUZA010000017.1 Genbank gene 15414 16460 . - . ID=gene-MK542_03210;Name=MK542_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03210 JAKUZA010000017.1 Protein Homology CDS 15414 16460 . - 0 ID=cds-MCY7217182.1;Parent=gene-MK542_03210;Dbxref=NCBI_GP:MCY7217182.1;Name=MCY7217182.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896909.1;locus_tag=MK542_03210;product=ABC transporter permease;protein_id=MCY7217182.1;transl_table=11 JAKUZA010000017.1 Genbank gene 16457 17188 . - . ID=gene-MK542_03215;Name=MK542_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03215 JAKUZA010000017.1 Protein Homology CDS 16457 17188 . - 0 ID=cds-MCY7217183.1;Parent=gene-MK542_03215;Dbxref=NCBI_GP:MCY7217183.1;Name=MCY7217183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269366.1;locus_tag=MK542_03215;product=ABC transporter ATP-binding protein;protein_id=MCY7217183.1;transl_table=11 JAKUZA010000017.1 Genbank gene 17263 17673 . + . ID=gene-MK542_03220;Name=MK542_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03220 JAKUZA010000017.1 Protein Homology CDS 17263 17673 . + 0 ID=cds-MCY7217184.1;Parent=gene-MK542_03220;Dbxref=NCBI_GP:MCY7217184.1;Name=MCY7217184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932508.1;locus_tag=MK542_03220;product=HIT family protein;protein_id=MCY7217184.1;transl_table=11 JAKUZA010000017.1 Genbank gene 17683 17967 . + . ID=gene-MK542_03225;Name=MK542_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03225 JAKUZA010000017.1 Protein Homology CDS 17683 17967 . + 0 ID=cds-MCY7217185.1;Parent=gene-MK542_03225;Dbxref=NCBI_GP:MCY7217185.1;Name=MCY7217185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932507.1;locus_tag=MK542_03225;product=hypothetical protein;protein_id=MCY7217185.1;transl_table=11 JAKUZA010000017.1 Genbank gene 18015 19208 . - . ID=gene-MK542_03230;Name=MK542_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03230 JAKUZA010000017.1 Protein Homology CDS 18015 19208 . - 0 ID=cds-MCY7217186.1;Parent=gene-MK542_03230;Dbxref=NCBI_GP:MCY7217186.1;Name=MCY7217186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918070.1;locus_tag=MK542_03230;product=LCP family protein;protein_id=MCY7217186.1;transl_table=11 JAKUZA010000017.1 Genbank gene 19216 19737 . - . ID=gene-MK542_03235;Name=MK542_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03235 JAKUZA010000017.1 Protein Homology CDS 19216 19737 . - 0 ID=cds-MCY7217187.1;Parent=gene-MK542_03235;Dbxref=NCBI_GP:MCY7217187.1;Name=MCY7217187.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189828.1;locus_tag=MK542_03235;product=GNAT family N-acetyltransferase;protein_id=MCY7217187.1;transl_table=11 JAKUZA010000017.1 Genbank gene 19730 20170 . - . ID=gene-MK542_03240;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=MK542_03240 JAKUZA010000017.1 Protein Homology CDS 19730 20170 . - 0 ID=cds-MCY7217188.1;Parent=gene-MK542_03240;Dbxref=NCBI_GP:MCY7217188.1;Name=MCY7217188.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078375.1;locus_tag=MK542_03240;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=MCY7217188.1;transl_table=11 JAKUZA010000017.1 Genbank gene 20372 21793 . - . ID=gene-MK542_03245;Name=MK542_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03245 JAKUZA010000017.1 Protein Homology CDS 20372 21793 . - 0 ID=cds-MCY7217189.1;Parent=gene-MK542_03245;Dbxref=NCBI_GP:MCY7217189.1;Name=MCY7217189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920093.1;locus_tag=MK542_03245;product=NCS2 family permease;protein_id=MCY7217189.1;transl_table=11 JAKUZA010000017.1 Genbank gene 21958 22560 . - . ID=gene-MK542_03250;Name=MK542_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03250 JAKUZA010000017.1 Protein Homology CDS 21958 22560 . - 0 ID=cds-MCY7217190.1;Parent=gene-MK542_03250;Dbxref=NCBI_GP:MCY7217190.1;Name=MCY7217190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070378.1;locus_tag=MK542_03250;product=DUF1361 domain-containing protein;protein_id=MCY7217190.1;transl_table=11 JAKUZA010000017.1 Genbank gene 22720 23532 . + . ID=gene-MK542_03255;Name=MK542_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03255 JAKUZA010000017.1 Protein Homology CDS 22720 23532 . + 0 ID=cds-MCY7217191.1;Parent=gene-MK542_03255;Dbxref=NCBI_GP:MCY7217191.1;Name=MCY7217191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162344.1;locus_tag=MK542_03255;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7217191.1;transl_table=11 JAKUZA010000017.1 Genbank gene 23881 24870 . + . ID=gene-MK542_03260;Name=MK542_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03260 JAKUZA010000017.1 Protein Homology CDS 23881 24870 . + 0 ID=cds-MCY7217192.1;Parent=gene-MK542_03260;Dbxref=NCBI_GP:MCY7217192.1;Name=MCY7217192.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021981.1;locus_tag=MK542_03260;product=PTS sugar transporter subunit IIB;protein_id=MCY7217192.1;transl_table=11 JAKUZA010000017.1 Genbank gene 24915 25718 . + . ID=gene-MK542_03265;Name=MK542_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03265 JAKUZA010000017.1 Protein Homology CDS 24915 25718 . + 0 ID=cds-MCY7217193.1;Parent=gene-MK542_03265;Dbxref=NCBI_GP:MCY7217193.1;Name=MCY7217193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022712.1;locus_tag=MK542_03265;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=MCY7217193.1;transl_table=11 JAKUZA010000017.1 Genbank gene 25737 26648 . + . ID=gene-MK542_03270;Name=MK542_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03270 JAKUZA010000017.1 Protein Homology CDS 25737 26648 . + 0 ID=cds-MCY7217194.1;Parent=gene-MK542_03270;Dbxref=NCBI_GP:MCY7217194.1;Name=MCY7217194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014829580.1;locus_tag=MK542_03270;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MCY7217194.1;transl_table=11 JAKUZA010000017.1 Genbank gene 26720 27091 . + . ID=gene-MK542_03275;Name=MK542_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03275 JAKUZA010000017.1 Protein Homology CDS 26720 27091 . + 0 ID=cds-MCY7217195.1;Parent=gene-MK542_03275;Dbxref=NCBI_GP:MCY7217195.1;Name=MCY7217195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224344.1;locus_tag=MK542_03275;product=DUF956 family protein;protein_id=MCY7217195.1;transl_table=11 JAKUZA010000017.1 Genbank gene 27304 28581 . + . ID=gene-MK542_03280;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=MK542_03280 JAKUZA010000017.1 Protein Homology CDS 27304 28581 . + 0 ID=cds-MCY7217196.1;Parent=gene-MK542_03280;Dbxref=NCBI_GP:MCY7217196.1;Name=MCY7217196.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926634.1;locus_tag=MK542_03280;product=serine--tRNA ligase;protein_id=MCY7217196.1;transl_table=11 JAKUZA010000017.1 Genbank gene 28800 29570 . - . ID=gene-MK542_03285;Name=MK542_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03285 JAKUZA010000017.1 Protein Homology CDS 28800 29570 . - 0 ID=cds-MCY7217197.1;Parent=gene-MK542_03285;Dbxref=NCBI_GP:MCY7217197.1;Name=MCY7217197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916375.1;locus_tag=MK542_03285;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=MCY7217197.1;transl_table=11 JAKUZA010000017.1 Genbank gene 29567 30430 . - . ID=gene-MK542_03290;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=MK542_03290 JAKUZA010000017.1 Protein Homology CDS 29567 30430 . - 0 ID=cds-MCY7217198.1;Parent=gene-MK542_03290;Dbxref=NCBI_GP:MCY7217198.1;Name=MCY7217198.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173348.1;locus_tag=MK542_03290;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=MCY7217198.1;transl_table=11 JAKUZA010000017.1 Genbank gene 30496 31863 . - . ID=gene-MK542_03295;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=MK542_03295 JAKUZA010000017.1 Protein Homology CDS 30496 31863 . - 0 ID=cds-MCY7217199.1;Parent=gene-MK542_03295;Dbxref=NCBI_GP:MCY7217199.1;Name=MCY7217199.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568040.1;locus_tag=MK542_03295;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=MCY7217199.1;transl_table=11 JAKUZA010000017.1 Genbank gene 31882 32304 . - . ID=gene-MK542_03300;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=MK542_03300 JAKUZA010000017.1 Protein Homology CDS 31882 32304 . - 0 ID=cds-MCY7217200.1;Parent=gene-MK542_03300;Dbxref=NCBI_GP:MCY7217200.1;Name=MCY7217200.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922202.1;locus_tag=MK542_03300;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=MCY7217200.1;transl_table=11 JAKUZA010000017.1 Genbank gene 32301 32798 . - . ID=gene-MK542_03305;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=MK542_03305 JAKUZA010000017.1 Protein Homology CDS 32301 32798 . - 0 ID=cds-MCY7217201.1;Parent=gene-MK542_03305;Dbxref=NCBI_GP:MCY7217201.1;Name=MCY7217201.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052236.1;locus_tag=MK542_03305;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=MCY7217201.1;transl_table=11 JAKUZA010000017.1 Genbank gene 32799 34031 . - . ID=gene-MK542_03310;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=MK542_03310 JAKUZA010000017.1 Protein Homology CDS 32799 34031 . - 0 ID=cds-MCY7217202.1;Parent=gene-MK542_03310;Dbxref=NCBI_GP:MCY7217202.1;Name=MCY7217202.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591710.1;locus_tag=MK542_03310;product=beta-ketoacyl-ACP synthase II;protein_id=MCY7217202.1;transl_table=11 JAKUZA010000017.1 Genbank gene 34085 34819 . - . ID=gene-MK542_03315;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=MK542_03315 JAKUZA010000017.1 Protein Homology CDS 34085 34819 . - 0 ID=cds-MCY7217203.1;Parent=gene-MK542_03315;Dbxref=NCBI_GP:MCY7217203.1;Name=MCY7217203.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771521.1;locus_tag=MK542_03315;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=MCY7217203.1;transl_table=11 JAKUZA010000017.1 Genbank gene 34832 35752 . - . ID=gene-MK542_03320;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=MK542_03320 JAKUZA010000017.1 Protein Homology CDS 34832 35752 . - 0 ID=cds-MCY7217204.1;Parent=gene-MK542_03320;Dbxref=NCBI_GP:MCY7217204.1;Name=MCY7217204.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896882.1;locus_tag=MK542_03320;product=ACP S-malonyltransferase;protein_id=MCY7217204.1;transl_table=11 JAKUZA010000017.1 Genbank gene 35745 36719 . - . ID=gene-MK542_03325;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=MK542_03325 JAKUZA010000017.1 Protein Homology CDS 35745 36719 . - 0 ID=cds-MCY7217205.1;Parent=gene-MK542_03325;Dbxref=NCBI_GP:MCY7217205.1;Name=MCY7217205.1;Ontology_term=GO:0018580;gbkey=CDS;gene=fabK;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896881.1;locus_tag=MK542_03325;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=MCY7217205.1;transl_table=11 JAKUZA010000017.1 Genbank gene 36855 37079 . - . ID=gene-MK542_03330;Name=MK542_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03330 JAKUZA010000017.1 Protein Homology CDS 36855 37079 . - 0 ID=cds-MCY7217206.1;Parent=gene-MK542_03330;Dbxref=NCBI_GP:MCY7217206.1;Name=MCY7217206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938891.1;locus_tag=MK542_03330;product=acyl carrier protein;protein_id=MCY7217206.1;transl_table=11 JAKUZA010000017.1 Genbank gene 37136 38110 . - . ID=gene-MK542_03335;Name=MK542_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03335 JAKUZA010000017.1 Protein Homology CDS 37136 38110 . - 0 ID=cds-MCY7217207.1;Parent=gene-MK542_03335;Dbxref=NCBI_GP:MCY7217207.1;Name=MCY7217207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262906.1;locus_tag=MK542_03335;product=ketoacyl-ACP synthase III;protein_id=MCY7217207.1;transl_table=11 JAKUZA010000017.1 Genbank gene 38110 38544 . - . ID=gene-MK542_03340;Name=MK542_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03340 JAKUZA010000017.1 Protein Homology CDS 38110 38544 . - 0 ID=cds-MCY7217208.1;Parent=gene-MK542_03340;Dbxref=NCBI_GP:MCY7217208.1;Name=MCY7217208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901186.1;locus_tag=MK542_03340;product=MarR family transcriptional regulator;protein_id=MCY7217208.1;transl_table=11 JAKUZA010000017.1 Genbank gene 38687 39478 . - . ID=gene-MK542_03345;Name=MK542_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03345 JAKUZA010000017.1 Protein Homology CDS 38687 39478 . - 0 ID=cds-MCY7217209.1;Parent=gene-MK542_03345;Dbxref=NCBI_GP:MCY7217209.1;Name=MCY7217209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002279164.1;locus_tag=MK542_03345;product=enoyl-CoA hydratase;protein_id=MCY7217209.1;transl_table=11 JAKUZA010000017.1 Genbank gene 39732 41096 . + . ID=gene-MK542_03350;Name=MK542_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03350 JAKUZA010000017.1 Protein Homology CDS 39732 41096 . + 0 ID=cds-MCY7217210.1;Parent=gene-MK542_03350;Dbxref=NCBI_GP:MCY7217210.1;Name=MCY7217210.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908087.1;locus_tag=MK542_03350;product=aspartate kinase;protein_id=MCY7217210.1;transl_table=11 JAKUZA010000017.1 Genbank pseudogene 41542 41855 . + . ID=gene-MK542_03355;Name=MK542_03355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_03355;pseudo=true JAKUZA010000017.1 Protein Homology CDS 41542 41855 . + 1 ID=cds-MK542_03355;Parent=gene-MK542_03355;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008534445.1;locus_tag=MK542_03355;product=transposase family protein;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000018.1 1 35226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000018.1 Genbank region 1 35226 . + . ID=JAKUZA010000018.1:1..35226;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000018.1 Genbank gene 303 1013 . - . ID=gene-MK542_03360;Name=MK542_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03360 JAKUZA010000018.1 Protein Homology CDS 303 1013 . - 0 ID=cds-MCY7217211.1;Parent=gene-MK542_03360;Dbxref=NCBI_GP:MCY7217211.1;Name=MCY7217211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=MK542_03360;product=ABC transporter ATP-binding protein;protein_id=MCY7217211.1;transl_table=11 JAKUZA010000018.1 Genbank gene 1013 1777 . - . ID=gene-MK542_03365;Name=MK542_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03365 JAKUZA010000018.1 Protein Homology CDS 1013 1777 . - 0 ID=cds-MCY7217212.1;Parent=gene-MK542_03365;Dbxref=NCBI_GP:MCY7217212.1;Name=MCY7217212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=MK542_03365;product=ABC transporter ATP-binding protein;protein_id=MCY7217212.1;transl_table=11 JAKUZA010000018.1 Genbank gene 1777 2730 . - . ID=gene-MK542_03370;Name=MK542_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03370 JAKUZA010000018.1 Protein Homology CDS 1777 2730 . - 0 ID=cds-MCY7217213.1;Parent=gene-MK542_03370;Dbxref=NCBI_GP:MCY7217213.1;Name=MCY7217213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914606.1;locus_tag=MK542_03370;product=branched-chain amino acid ABC transporter permease;protein_id=MCY7217213.1;transl_table=11 JAKUZA010000018.1 Genbank gene 2734 3615 . - . ID=gene-MK542_03375;Name=MK542_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03375 JAKUZA010000018.1 Protein Homology CDS 2734 3615 . - 0 ID=cds-MCY7217214.1;Parent=gene-MK542_03375;Dbxref=NCBI_GP:MCY7217214.1;Name=MCY7217214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000893079.1;locus_tag=MK542_03375;product=branched-chain amino acid ABC transporter permease;protein_id=MCY7217214.1;transl_table=11 JAKUZA010000018.1 Genbank gene 3755 4915 . - . ID=gene-MK542_03380;Name=MK542_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03380 JAKUZA010000018.1 Protein Homology CDS 3755 4915 . - 0 ID=cds-MCY7217215.1;Parent=gene-MK542_03380;Dbxref=NCBI_GP:MCY7217215.1;Name=MCY7217215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914604.1;locus_tag=MK542_03380;product=ABC transporter substrate-binding protein;protein_id=MCY7217215.1;transl_table=11 JAKUZA010000018.1 Genbank gene 5005 5274 . - . ID=gene-MK542_03385;Name=MK542_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03385 JAKUZA010000018.1 Protein Homology CDS 5005 5274 . - 0 ID=cds-MCY7217216.1;Parent=gene-MK542_03385;Dbxref=NCBI_GP:MCY7217216.1;Name=MCY7217216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659102.1;locus_tag=MK542_03385;product=DUF2129 domain-containing protein;protein_id=MCY7217216.1;transl_table=11 JAKUZA010000018.1 Genbank gene 5375 5965 . - . ID=gene-MK542_03390;Name=MK542_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03390 JAKUZA010000018.1 Protein Homology CDS 5375 5965 . - 0 ID=cds-MCY7217217.1;Parent=gene-MK542_03390;Dbxref=NCBI_GP:MCY7217217.1;Name=MCY7217217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809559.1;locus_tag=MK542_03390;product=ATP-dependent Clp protease proteolytic subunit;protein_id=MCY7217217.1;transl_table=11 JAKUZA010000018.1 Genbank gene 6136 6765 . - . ID=gene-MK542_03395;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=MK542_03395 JAKUZA010000018.1 Protein Homology CDS 6136 6765 . - 0 ID=cds-MCY7217218.1;Parent=gene-MK542_03395;Dbxref=NCBI_GP:MCY7217218.1;Name=MCY7217218.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=MK542_03395;product=uracil phosphoribosyltransferase;protein_id=MCY7217218.1;transl_table=11 JAKUZA010000018.1 Genbank gene 6863 9523 . - . ID=gene-MK542_03400;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=MK542_03400 JAKUZA010000018.1 Protein Homology CDS 6863 9523 . - 0 ID=cds-MCY7217219.1;Parent=gene-MK542_03400;Dbxref=NCBI_GP:MCY7217219.1;Name=MCY7217219.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894669.1;locus_tag=MK542_03400;product=magnesium-translocating P-type ATPase;protein_id=MCY7217219.1;transl_table=11 JAKUZA010000018.1 cmsearch riboswitch 9803 9955 . - . ID=id-JAKUZA010000018.1:9803..9955;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000018.1 Genbank gene 10070 10252 . - . ID=gene-MK542_03405;Name=MK542_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03405 JAKUZA010000018.1 Protein Homology CDS 10070 10252 . - 0 ID=cds-MCY7217220.1;Parent=gene-MK542_03405;Dbxref=NCBI_GP:MCY7217220.1;Name=MCY7217220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605239.1;locus_tag=MK542_03405;product=PspC domain-containing protein;protein_id=MCY7217220.1;transl_table=11 JAKUZA010000018.1 Genbank gene 10334 10831 . - . ID=gene-MK542_03410;Name=MK542_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03410 JAKUZA010000018.1 Protein Homology CDS 10334 10831 . - 0 ID=cds-MCY7217221.1;Parent=gene-MK542_03410;Dbxref=NCBI_GP:MCY7217221.1;Name=MCY7217221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014634428.1;locus_tag=MK542_03410;product=DUF2798 domain-containing protein;protein_id=MCY7217221.1;transl_table=11 JAKUZA010000018.1 Genbank gene 10989 11201 . + . ID=gene-MK542_03415;Name=MK542_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03415 JAKUZA010000018.1 Protein Homology CDS 10989 11201 . + 0 ID=cds-MCY7217222.1;Parent=gene-MK542_03415;Dbxref=NCBI_GP:MCY7217222.1;Name=MCY7217222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=MK542_03415;product=NUDIX hydrolase;protein_id=MCY7217222.1;transl_table=11 JAKUZA010000018.1 Genbank gene 11256 11408 . + . ID=gene-MK542_03420;Name=MK542_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03420 JAKUZA010000018.1 GeneMarkS-2+ CDS 11256 11408 . + 0 ID=cds-MCY7217223.1;Parent=gene-MK542_03420;Dbxref=NCBI_GP:MCY7217223.1;Name=MCY7217223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_03420;product=hypothetical protein;protein_id=MCY7217223.1;transl_table=11 JAKUZA010000018.1 Genbank gene 11464 12273 . + . ID=gene-MK542_03425;Name=MK542_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03425 JAKUZA010000018.1 Protein Homology CDS 11464 12273 . + 0 ID=cds-MCY7217224.1;Parent=gene-MK542_03425;Dbxref=NCBI_GP:MCY7217224.1;Name=MCY7217224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899874.1;locus_tag=MK542_03425;product=peptidylprolyl isomerase;protein_id=MCY7217224.1;transl_table=11 JAKUZA010000018.1 Genbank gene 12366 12545 . + . ID=gene-MK542_03430;Name=MK542_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03430 JAKUZA010000018.1 Protein Homology CDS 12366 12545 . + 0 ID=cds-MCY7217225.1;Parent=gene-MK542_03430;Dbxref=NCBI_GP:MCY7217225.1;Name=MCY7217225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913318.1;locus_tag=MK542_03430;product=zinc-ribbon domain-containing protein;protein_id=MCY7217225.1;transl_table=11 JAKUZA010000018.1 Genbank gene 12600 14141 . - . ID=gene-MK542_03435;Name=MK542_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03435 JAKUZA010000018.1 Protein Homology CDS 12600 14141 . - 0 ID=cds-MCY7217226.1;Parent=gene-MK542_03435;Dbxref=NCBI_GP:MCY7217226.1;Name=MCY7217226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918612.1;locus_tag=MK542_03435;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217226.1;transl_table=11 JAKUZA010000018.1 Genbank gene 14253 14561 . - . ID=gene-MK542_03440;Name=MK542_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03440 JAKUZA010000018.1 Protein Homology CDS 14253 14561 . - 0 ID=cds-MCY7217227.1;Parent=gene-MK542_03440;Dbxref=NCBI_GP:MCY7217227.1;Name=MCY7217227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905025.1;locus_tag=MK542_03440;product=DUF898 domain-containing protein;protein_id=MCY7217227.1;transl_table=11 JAKUZA010000018.1 Genbank gene 14574 15266 . - . ID=gene-MK542_03445;Name=MK542_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03445 JAKUZA010000018.1 Protein Homology CDS 14574 15266 . - 0 ID=cds-MCY7217228.1;Parent=gene-MK542_03445;Dbxref=NCBI_GP:MCY7217228.1;Name=MCY7217228.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009570369.1;locus_tag=MK542_03445;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MCY7217228.1;transl_table=11 JAKUZA010000018.1 Genbank gene 15324 15635 . - . ID=gene-MK542_03450;Name=macP;gbkey=Gene;gene=macP;gene_biotype=protein_coding;locus_tag=MK542_03450 JAKUZA010000018.1 Protein Homology CDS 15324 15635 . - 0 ID=cds-MCY7217229.1;Parent=gene-MK542_03450;Dbxref=NCBI_GP:MCY7217229.1;Name=MCY7217229.1;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004233748.1;locus_tag=MK542_03450;product=cell wall synthase accessory phosphoprotein MacP;protein_id=MCY7217229.1;transl_table=11 JAKUZA010000018.1 Genbank gene 15648 16202 . - . ID=gene-MK542_03455;Name=MK542_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03455 JAKUZA010000018.1 Protein Homology CDS 15648 16202 . - 0 ID=cds-MCY7217230.1;Parent=gene-MK542_03455;Dbxref=NCBI_GP:MCY7217230.1;Name=MCY7217230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931195.1;locus_tag=MK542_03455;product=NUDIX hydrolase;protein_id=MCY7217230.1;transl_table=11 JAKUZA010000018.1 Genbank gene 16211 17590 . - . ID=gene-MK542_03460;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=MK542_03460 JAKUZA010000018.1 Protein Homology CDS 16211 17590 . - 0 ID=cds-MCY7217231.1;Parent=gene-MK542_03460;Dbxref=NCBI_GP:MCY7217231.1;Name=MCY7217231.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899862.1;locus_tag=MK542_03460;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=MCY7217231.1;transl_table=11 JAKUZA010000018.1 Genbank gene 17927 18625 . - . ID=gene-MK542_03465;Name=MK542_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03465 JAKUZA010000018.1 Protein Homology CDS 17927 18625 . - 0 ID=cds-MCY7217232.1;Parent=gene-MK542_03465;Dbxref=NCBI_GP:MCY7217232.1;Name=MCY7217232.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185964.1;locus_tag=MK542_03465;product=3-oxoacyl-ACP reductase;protein_id=MCY7217232.1;transl_table=11 JAKUZA010000018.1 Genbank gene 18618 18854 . - . ID=gene-MK542_03470;Name=MK542_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03470 JAKUZA010000018.1 Protein Homology CDS 18618 18854 . - 0 ID=cds-MCY7217233.1;Parent=gene-MK542_03470;Dbxref=NCBI_GP:MCY7217233.1;Name=MCY7217233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014156.1;locus_tag=MK542_03470;product=DUF2829 domain-containing protein;protein_id=MCY7217233.1;transl_table=11 JAKUZA010000018.1 Genbank gene 18950 20095 . - . ID=gene-MK542_03475;Name=MK542_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03475 JAKUZA010000018.1 Protein Homology CDS 18950 20095 . - 0 ID=cds-MCY7217234.1;Parent=gene-MK542_03475;Dbxref=NCBI_GP:MCY7217234.1;Name=MCY7217234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481078.1;locus_tag=MK542_03475;product=site-specific integrase;protein_id=MCY7217234.1;transl_table=11 JAKUZA010000018.1 Genbank gene 20420 21184 . + . ID=gene-MK542_03480;Name=MK542_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03480 JAKUZA010000018.1 Protein Homology CDS 20420 21184 . + 0 ID=cds-MCY7217235.1;Parent=gene-MK542_03480;Dbxref=NCBI_GP:MCY7217235.1;Name=MCY7217235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033569.1;locus_tag=MK542_03480;product=hypothetical protein;protein_id=MCY7217235.1;transl_table=11 JAKUZA010000018.1 Genbank gene 21179 21874 . - . ID=gene-MK542_03485;Name=MK542_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03485 JAKUZA010000018.1 Protein Homology CDS 21179 21874 . - 0 ID=cds-MCY7217236.1;Parent=gene-MK542_03485;Dbxref=NCBI_GP:MCY7217236.1;Name=MCY7217236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501424.1;locus_tag=MK542_03485;product=hypothetical protein;protein_id=MCY7217236.1;transl_table=11 JAKUZA010000018.1 Genbank gene 22147 22725 . - . ID=gene-MK542_03490;Name=MK542_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03490 JAKUZA010000018.1 Protein Homology CDS 22147 22725 . - 0 ID=cds-MCY7217237.1;Parent=gene-MK542_03490;Dbxref=NCBI_GP:MCY7217237.1;Name=MCY7217237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890428.1;locus_tag=MK542_03490;product=helix-turn-helix transcriptional regulator;protein_id=MCY7217237.1;transl_table=11 JAKUZA010000018.1 Genbank gene 22889 23086 . + . ID=gene-MK542_03495;Name=MK542_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03495 JAKUZA010000018.1 Protein Homology CDS 22889 23086 . + 0 ID=cds-MCY7217238.1;Parent=gene-MK542_03495;Dbxref=NCBI_GP:MCY7217238.1;Name=MCY7217238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644139.1;locus_tag=MK542_03495;product=helix-turn-helix transcriptional regulator;protein_id=MCY7217238.1;transl_table=11 JAKUZA010000018.1 Genbank gene 23103 23741 . + . ID=gene-MK542_03500;Name=MK542_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03500 JAKUZA010000018.1 Protein Homology CDS 23103 23741 . + 0 ID=cds-MCY7217239.1;Parent=gene-MK542_03500;Dbxref=NCBI_GP:MCY7217239.1;Name=MCY7217239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647584.1;locus_tag=MK542_03500;product=Rha family transcriptional regulator;protein_id=MCY7217239.1;transl_table=11 JAKUZA010000018.1 Genbank gene 24026 24328 . + . ID=gene-MK542_03505;Name=MK542_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03505 JAKUZA010000018.1 Protein Homology CDS 24026 24328 . + 0 ID=cds-MCY7217240.1;Parent=gene-MK542_03505;Dbxref=NCBI_GP:MCY7217240.1;Name=MCY7217240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003077254.1;locus_tag=MK542_03505;product=hypothetical protein;protein_id=MCY7217240.1;transl_table=11 JAKUZA010000018.1 Genbank gene 24517 24732 . + . ID=gene-MK542_03510;Name=MK542_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03510 JAKUZA010000018.1 Protein Homology CDS 24517 24732 . + 0 ID=cds-MCY7217241.1;Parent=gene-MK542_03510;Dbxref=NCBI_GP:MCY7217241.1;Name=MCY7217241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645431.1;locus_tag=MK542_03510;product=hypothetical protein;protein_id=MCY7217241.1;transl_table=11 JAKUZA010000018.1 Genbank gene 24719 25051 . + . ID=gene-MK542_03515;Name=MK542_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03515 JAKUZA010000018.1 Protein Homology CDS 24719 25051 . + 0 ID=cds-MCY7217242.1;Parent=gene-MK542_03515;Dbxref=NCBI_GP:MCY7217242.1;Name=MCY7217242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058293.1;locus_tag=MK542_03515;product=DNA-binding protein;protein_id=MCY7217242.1;transl_table=11 JAKUZA010000018.1 Genbank gene 25044 25325 . + . ID=gene-MK542_03520;Name=MK542_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03520 JAKUZA010000018.1 Protein Homology CDS 25044 25325 . + 0 ID=cds-MCY7217243.1;Parent=gene-MK542_03520;Dbxref=NCBI_GP:MCY7217243.1;Name=MCY7217243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492137.1;locus_tag=MK542_03520;product=XRE family transcriptional regulator;protein_id=MCY7217243.1;transl_table=11 JAKUZA010000018.1 Genbank gene 25460 26329 . + . ID=gene-MK542_03525;Name=MK542_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03525 JAKUZA010000018.1 Protein Homology CDS 25460 26329 . + 0 ID=cds-MCY7217244.1;Parent=gene-MK542_03525;Dbxref=NCBI_GP:MCY7217244.1;Name=MCY7217244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158206.1;locus_tag=MK542_03525;product=primase alpha helix C-terminal domain-containing protein;protein_id=MCY7217244.1;transl_table=11 JAKUZA010000018.1 Genbank gene 26349 27851 . + . ID=gene-MK542_03530;Name=MK542_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03530 JAKUZA010000018.1 Protein Homology CDS 26349 27851 . + 0 ID=cds-MCY7217245.1;Parent=gene-MK542_03530;Dbxref=NCBI_GP:MCY7217245.1;Name=MCY7217245.1;Ontology_term=GO:0006260,GO:0003896;gbkey=CDS;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838178.1;locus_tag=MK542_03530;product=phage/plasmid primase%2C P4 family;protein_id=MCY7217245.1;transl_table=11 JAKUZA010000018.1 Genbank gene 28189 28365 . + . ID=gene-MK542_03535;Name=MK542_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03535 JAKUZA010000018.1 Protein Homology CDS 28189 28365 . + 0 ID=cds-MCY7217246.1;Parent=gene-MK542_03535;Dbxref=NCBI_GP:MCY7217246.1;Name=MCY7217246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003105758.1;locus_tag=MK542_03535;product=hypothetical protein;protein_id=MCY7217246.1;transl_table=11 JAKUZA010000018.1 Genbank gene 28377 28835 . + . ID=gene-MK542_03540;Name=MK542_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03540 JAKUZA010000018.1 Protein Homology CDS 28377 28835 . + 0 ID=cds-MCY7217247.1;Parent=gene-MK542_03540;Dbxref=NCBI_GP:MCY7217247.1;Name=MCY7217247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572369.1;locus_tag=MK542_03540;product=hypothetical protein;protein_id=MCY7217247.1;transl_table=11 JAKUZA010000018.1 Genbank gene 28934 29443 . + . ID=gene-MK542_03545;Name=MK542_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03545 JAKUZA010000018.1 Protein Homology CDS 28934 29443 . + 0 ID=cds-MCY7217248.1;Parent=gene-MK542_03545;Dbxref=NCBI_GP:MCY7217248.1;Name=MCY7217248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811078.1;locus_tag=MK542_03545;product=hypothetical protein;protein_id=MCY7217248.1;transl_table=11 JAKUZA010000018.1 Genbank gene 30051 30404 . - . ID=gene-MK542_03550;Name=MK542_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03550 JAKUZA010000018.1 Protein Homology CDS 30051 30404 . - 0 ID=cds-MCY7217249.1;Parent=gene-MK542_03550;Dbxref=NCBI_GP:MCY7217249.1;Name=MCY7217249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125658.1;locus_tag=MK542_03550;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=MCY7217249.1;transl_table=11 JAKUZA010000018.1 Genbank gene 30388 30603 . - . ID=gene-MK542_03555;Name=MK542_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03555 JAKUZA010000018.1 Protein Homology CDS 30388 30603 . - 0 ID=cds-MCY7217250.1;Parent=gene-MK542_03555;Dbxref=NCBI_GP:MCY7217250.1;Name=MCY7217250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098933.1;locus_tag=MK542_03555;product=AbrB family transcriptional regulator;protein_id=MCY7217250.1;transl_table=11 JAKUZA010000018.1 Genbank gene 30738 31151 . + . ID=gene-MK542_03560;Name=MK542_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03560 JAKUZA010000018.1 Protein Homology CDS 30738 31151 . + 0 ID=cds-MCY7217251.1;Parent=gene-MK542_03560;Dbxref=NCBI_GP:MCY7217251.1;Name=MCY7217251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003077305.1;locus_tag=MK542_03560;product=DUF1492 domain-containing protein;protein_id=MCY7217251.1;transl_table=11 JAKUZA010000018.1 Genbank gene 31434 31616 . + . ID=gene-MK542_03565;Name=MK542_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03565 JAKUZA010000018.1 Protein Homology CDS 31434 31616 . + 0 ID=cds-MCY7217252.1;Parent=gene-MK542_03565;Dbxref=NCBI_GP:MCY7217252.1;Name=MCY7217252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002961998.1;locus_tag=MK542_03565;product=type II toxin-antitoxin system HicA family toxin;protein_id=MCY7217252.1;transl_table=11 JAKUZA010000018.1 Genbank gene 31654 32106 . + . ID=gene-MK542_03570;Name=MK542_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03570 JAKUZA010000018.1 Protein Homology CDS 31654 32106 . + 0 ID=cds-MCY7217253.1;Parent=gene-MK542_03570;Dbxref=NCBI_GP:MCY7217253.1;Name=MCY7217253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961815.1;locus_tag=MK542_03570;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MCY7217253.1;transl_table=11 JAKUZA010000018.1 Genbank gene 32619 33785 . - . ID=gene-MK542_03575;Name=MK542_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03575 JAKUZA010000018.1 Protein Homology CDS 32619 33785 . - 0 ID=cds-MCY7217254.1;Parent=gene-MK542_03575;Dbxref=NCBI_GP:MCY7217254.1;Name=MCY7217254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070081.1;locus_tag=MK542_03575;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCY7217254.1;transl_table=11 JAKUZA010000018.1 Genbank gene 33787 34881 . - . ID=gene-MK542_03580;Name=MK542_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03580 JAKUZA010000018.1 Protein Homology CDS 33787 34881 . - 0 ID=cds-MCY7217255.1;Parent=gene-MK542_03580;Dbxref=NCBI_GP:MCY7217255.1;Name=MCY7217255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033920.1;locus_tag=MK542_03580;product=cystathionine gamma-synthase;protein_id=MCY7217255.1;transl_table=11 ##sequence-region JAKUZA010000019.1 1 36928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000019.1 Genbank region 1 36928 . + . ID=JAKUZA010000019.1:1..36928;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000019.1 Genbank pseudogene 41 481 . - . ID=gene-MK542_03585;Name=MK542_03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_03585;pseudo=true JAKUZA010000019.1 Protein Homology CDS 41 481 . - 0 ID=cds-MK542_03585;Parent=gene-MK542_03585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268143.1;locus_tag=MK542_03585;product=transposase family protein;pseudo=true;transl_table=11 JAKUZA010000019.1 Genbank gene 706 1989 . + . ID=gene-MK542_03590;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=MK542_03590 JAKUZA010000019.1 Protein Homology CDS 706 1989 . + 0 ID=cds-MCY7217256.1;Parent=gene-MK542_03590;Dbxref=NCBI_GP:MCY7217256.1;Name=MCY7217256.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913403.1;locus_tag=MK542_03590;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MCY7217256.1;transl_table=11 JAKUZA010000019.1 Genbank gene 1982 2467 . + . ID=gene-MK542_03595;Name=MK542_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03595 JAKUZA010000019.1 Protein Homology CDS 1982 2467 . + 0 ID=cds-MCY7217257.1;Parent=gene-MK542_03595;Dbxref=NCBI_GP:MCY7217257.1;Name=MCY7217257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903419.1;locus_tag=MK542_03595;product=shikimate kinase;protein_id=MCY7217257.1;transl_table=11 JAKUZA010000019.1 Genbank gene 2458 3291 . + . ID=gene-MK542_03600;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=MK542_03600 JAKUZA010000019.1 Protein Homology CDS 2458 3291 . + 0 ID=cds-MCY7217258.1;Parent=gene-MK542_03600;Dbxref=NCBI_GP:MCY7217258.1;Name=MCY7217258.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895100.1;locus_tag=MK542_03600;product=prephenate dehydratase;protein_id=MCY7217258.1;transl_table=11 JAKUZA010000019.1 Genbank gene 3304 4665 . + . ID=gene-MK542_03605;Name=MK542_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03605 JAKUZA010000019.1 Protein Homology CDS 3304 4665 . + 0 ID=cds-MCY7217259.1;Parent=gene-MK542_03605;Dbxref=NCBI_GP:MCY7217259.1;Name=MCY7217259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032347.1;locus_tag=MK542_03605;product=LCP family protein;protein_id=MCY7217259.1;transl_table=11 JAKUZA010000019.1 Genbank gene 4849 6276 . + . ID=gene-MK542_03610;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=MK542_03610 JAKUZA010000019.1 Protein Homology CDS 4849 6276 . + 0 ID=cds-MCY7217260.1;Parent=gene-MK542_03610;Dbxref=NCBI_GP:MCY7217260.1;Name=MCY7217260.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659414.1;locus_tag=MK542_03610;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MCY7217260.1;transl_table=11 JAKUZA010000019.1 Genbank gene 6687 7316 . + . ID=gene-MK542_03615;Name=MK542_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03615 JAKUZA010000019.1 Protein Homology CDS 6687 7316 . + 0 ID=cds-MCY7217261.1;Parent=gene-MK542_03615;Dbxref=NCBI_GP:MCY7217261.1;Name=MCY7217261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312619.1;locus_tag=MK542_03615;product=hypothetical protein;protein_id=MCY7217261.1;transl_table=11 JAKUZA010000019.1 Genbank gene 7343 9115 . + . ID=gene-MK542_03620;Name=MK542_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03620 JAKUZA010000019.1 Protein Homology CDS 7343 9115 . + 0 ID=cds-MCY7217262.1;Parent=gene-MK542_03620;Dbxref=NCBI_GP:MCY7217262.1;Name=MCY7217262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596086.1;locus_tag=MK542_03620;product=hypothetical protein;protein_id=MCY7217262.1;transl_table=11 JAKUZA010000019.1 Genbank gene 9200 11128 . + . ID=gene-MK542_03625;Name=MK542_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03625 JAKUZA010000019.1 Protein Homology CDS 9200 11128 . + 0 ID=cds-MCY7217263.1;Parent=gene-MK542_03625;Dbxref=NCBI_GP:MCY7217263.1;Name=MCY7217263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.2;locus_tag=MK542_03625;product=SIR2 family protein;protein_id=MCY7217263.1;transl_table=11 JAKUZA010000019.1 Genbank gene 11284 12090 . + . ID=gene-MK542_03630;Name=MK542_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03630 JAKUZA010000019.1 Protein Homology CDS 11284 12090 . + 0 ID=cds-MCY7217264.1;Parent=gene-MK542_03630;Dbxref=NCBI_GP:MCY7217264.1;Name=MCY7217264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568443.1;locus_tag=MK542_03630;product=alpha/beta hydrolase;protein_id=MCY7217264.1;transl_table=11 JAKUZA010000019.1 Genbank pseudogene 12102 12221 . + . ID=gene-MK542_03635;Name=MK542_03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_03635;pseudo=true JAKUZA010000019.1 Protein Homology CDS 12102 12221 . + 0 ID=cds-MK542_03635;Parent=gene-MK542_03635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900021.1;locus_tag=MK542_03635;product=ADP-ribosylglycohydrolase;pseudo=true;transl_table=11 JAKUZA010000019.1 Genbank gene 12437 13108 . + . ID=gene-MK542_03640;Name=MK542_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03640 JAKUZA010000019.1 Protein Homology CDS 12437 13108 . + 0 ID=cds-MCY7217265.1;Parent=gene-MK542_03640;Dbxref=NCBI_GP:MCY7217265.1;Name=MCY7217265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754908.1;locus_tag=MK542_03640;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217265.1;transl_table=11 JAKUZA010000019.1 Genbank gene 13373 15139 . + . ID=gene-MK542_03645;Name=MK542_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03645 JAKUZA010000019.1 Protein Homology CDS 13373 15139 . + 0 ID=cds-MCY7217266.1;Parent=gene-MK542_03645;Dbxref=NCBI_GP:MCY7217266.1;Name=MCY7217266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590109.1;locus_tag=MK542_03645;product=glycoside hydrolase family 13 protein;protein_id=MCY7217266.1;transl_table=11 JAKUZA010000019.1 Genbank gene 15295 15606 . + . ID=gene-MK542_03650;Name=MK542_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03650 JAKUZA010000019.1 Protein Homology CDS 15295 15606 . + 0 ID=cds-MCY7217267.1;Parent=gene-MK542_03650;Dbxref=NCBI_GP:MCY7217267.1;Name=MCY7217267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003006843.1;locus_tag=MK542_03650;product=hypothetical protein;protein_id=MCY7217267.1;transl_table=11 JAKUZA010000019.1 Genbank gene 15927 16814 . + . ID=gene-MK542_03655;Name=MK542_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03655 JAKUZA010000019.1 Protein Homology CDS 15927 16814 . + 0 ID=cds-MCY7217268.1;Parent=gene-MK542_03655;Dbxref=NCBI_GP:MCY7217268.1;Name=MCY7217268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930889.1;locus_tag=MK542_03655;product=DUF4300 family protein;protein_id=MCY7217268.1;transl_table=11 JAKUZA010000019.1 Genbank gene 17142 17591 . + . ID=gene-MK542_03660;Name=MK542_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03660 JAKUZA010000019.1 Protein Homology CDS 17142 17591 . + 0 ID=cds-MCY7217269.1;Parent=gene-MK542_03660;Dbxref=NCBI_GP:MCY7217269.1;Name=MCY7217269.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912824.1;locus_tag=MK542_03660;product=MarR family transcriptional regulator;protein_id=MCY7217269.1;transl_table=11 JAKUZA010000019.1 Genbank gene 17600 18307 . + . ID=gene-MK542_03665;Name=MK542_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03665 JAKUZA010000019.1 Protein Homology CDS 17600 18307 . + 0 ID=cds-MCY7217270.1;Parent=gene-MK542_03665;Dbxref=NCBI_GP:MCY7217270.1;Name=MCY7217270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933166.1;locus_tag=MK542_03665;product=hypothetical protein;protein_id=MCY7217270.1;transl_table=11 JAKUZA010000019.1 Genbank gene 18452 18862 . - . ID=gene-MK542_03670;Name=MK542_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03670 JAKUZA010000019.1 Protein Homology CDS 18452 18862 . - 0 ID=cds-MCY7217271.1;Parent=gene-MK542_03670;Dbxref=NCBI_GP:MCY7217271.1;Name=MCY7217271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187041.1;locus_tag=MK542_03670;product=GNAT family N-acetyltransferase;protein_id=MCY7217271.1;transl_table=11 JAKUZA010000019.1 Genbank gene 18899 19336 . - . ID=gene-MK542_03675;Name=MK542_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03675 JAKUZA010000019.1 Protein Homology CDS 18899 19336 . - 0 ID=cds-MCY7217272.1;Parent=gene-MK542_03675;Dbxref=NCBI_GP:MCY7217272.1;Name=MCY7217272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900020.1;locus_tag=MK542_03675;product=GtrA family protein;protein_id=MCY7217272.1;transl_table=11 JAKUZA010000019.1 cmsearch riboswitch 19445 19539 . + . ID=id-JAKUZA010000019.1:19445..19539;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000019.1 Genbank gene 19537 20052 . + . ID=gene-MK542_03680;Name=MK542_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03680 JAKUZA010000019.1 Protein Homology CDS 19537 20052 . + 0 ID=cds-MCY7217273.1;Parent=gene-MK542_03680;Dbxref=NCBI_GP:MCY7217273.1;Name=MCY7217273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917015.1;locus_tag=MK542_03680;product=QueT transporter family protein;protein_id=MCY7217273.1;transl_table=11 JAKUZA010000019.1 Genbank gene 20156 22114 . + . ID=gene-MK542_03685;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=MK542_03685 JAKUZA010000019.1 Protein Homology CDS 20156 22114 . + 0 ID=cds-MCY7217274.1;Parent=gene-MK542_03685;Dbxref=NCBI_GP:MCY7217274.1;Name=MCY7217274.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837172.1;locus_tag=MK542_03685;product=NAD-dependent DNA ligase LigA;protein_id=MCY7217274.1;transl_table=11 JAKUZA010000019.1 Genbank gene 22123 23073 . + . ID=gene-MK542_03690;Name=MK542_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03690 JAKUZA010000019.1 Protein Homology CDS 22123 23073 . + 0 ID=cds-MCY7217275.1;Parent=gene-MK542_03690;Dbxref=NCBI_GP:MCY7217275.1;Name=MCY7217275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895076.1;locus_tag=MK542_03690;product=diacylglycerol kinase family lipid kinase;protein_id=MCY7217275.1;transl_table=11 JAKUZA010000019.1 Genbank gene 23099 25396 . + . ID=gene-MK542_03695;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=MK542_03695 JAKUZA010000019.1 Protein Homology CDS 23099 25396 . + 0 ID=cds-MCY7217276.1;Parent=gene-MK542_03695;Dbxref=NCBI_GP:MCY7217276.1;Name=MCY7217276.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895078.1;locus_tag=MK542_03695;product=type I pullulanase;protein_id=MCY7217276.1;transl_table=11 JAKUZA010000019.1 Genbank gene 25545 27749 . - . ID=gene-MK542_03700;Name=MK542_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03700 JAKUZA010000019.1 Protein Homology CDS 25545 27749 . - 0 ID=cds-MCY7217277.1;Parent=gene-MK542_03700;Dbxref=NCBI_GP:MCY7217277.1;Name=MCY7217277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930925.1;locus_tag=MK542_03700;product=LTA synthase family protein;protein_id=MCY7217277.1;transl_table=11 JAKUZA010000019.1 Genbank gene 28094 28471 . + . ID=gene-MK542_03705;Name=MK542_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03705 JAKUZA010000019.1 Protein Homology CDS 28094 28471 . + 0 ID=cds-MCY7217278.1;Parent=gene-MK542_03705;Dbxref=NCBI_GP:MCY7217278.1;Name=MCY7217278.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018598194.1;locus_tag=MK542_03705;product=GntR family transcriptional regulator;protein_id=MCY7217278.1;transl_table=11 JAKUZA010000019.1 Genbank gene 28474 29352 . + . ID=gene-MK542_03710;Name=MK542_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03710 JAKUZA010000019.1 Protein Homology CDS 28474 29352 . + 0 ID=cds-MCY7217279.1;Parent=gene-MK542_03710;Dbxref=NCBI_GP:MCY7217279.1;Name=MCY7217279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016292167.1;locus_tag=MK542_03710;product=ABC transporter ATP-binding protein;protein_id=MCY7217279.1;transl_table=11 JAKUZA010000019.1 Genbank gene 29336 29989 . + . ID=gene-MK542_03715;Name=MK542_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03715 JAKUZA010000019.1 Protein Homology CDS 29336 29989 . + 0 ID=cds-MCY7217280.1;Parent=gene-MK542_03715;Dbxref=NCBI_GP:MCY7217280.1;Name=MCY7217280.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024741.2;locus_tag=MK542_03715;product=ABC-2 transporter permease;protein_id=MCY7217280.1;transl_table=11 JAKUZA010000019.1 Genbank gene 30195 31358 . + . ID=gene-MK542_03720;Name=MK542_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03720 JAKUZA010000019.1 Protein Homology CDS 30195 31358 . + 0 ID=cds-MCY7217281.1;Parent=gene-MK542_03720;Dbxref=NCBI_GP:MCY7217281.1;Name=MCY7217281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186271.1;locus_tag=MK542_03720;product=class I SAM-dependent rRNA methyltransferase;protein_id=MCY7217281.1;transl_table=11 JAKUZA010000019.1 Genbank gene 31355 32032 . + . ID=gene-MK542_03725;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=MK542_03725 JAKUZA010000019.1 Protein Homology CDS 31355 32032 . + 0 ID=cds-MCY7217282.1;Parent=gene-MK542_03725;Dbxref=NCBI_GP:MCY7217282.1;Name=MCY7217282.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897280.1;locus_tag=MK542_03725;product=type I 3-dehydroquinate dehydratase;protein_id=MCY7217282.1;transl_table=11 JAKUZA010000019.1 Genbank gene 32022 32879 . + . ID=gene-MK542_03730;Name=MK542_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03730 JAKUZA010000019.1 Protein Homology CDS 32022 32879 . + 0 ID=cds-MCY7217283.1;Parent=gene-MK542_03730;Dbxref=NCBI_GP:MCY7217283.1;Name=MCY7217283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009755115.1;locus_tag=MK542_03730;product=shikimate dehydrogenase;protein_id=MCY7217283.1;transl_table=11 JAKUZA010000019.1 Genbank gene 33056 34123 . + . ID=gene-MK542_03735;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=MK542_03735 JAKUZA010000019.1 Protein Homology CDS 33056 34123 . + 0 ID=cds-MCY7217284.1;Parent=gene-MK542_03735;Dbxref=NCBI_GP:MCY7217284.1;Name=MCY7217284.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308136.1;locus_tag=MK542_03735;product=3-dehydroquinate synthase;protein_id=MCY7217284.1;transl_table=11 JAKUZA010000019.1 Genbank gene 34215 35381 . + . ID=gene-MK542_03740;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=MK542_03740 JAKUZA010000019.1 Protein Homology CDS 34215 35381 . + 0 ID=cds-MCY7217285.1;Parent=gene-MK542_03740;Dbxref=NCBI_GP:MCY7217285.1;Name=MCY7217285.1;Ontology_term=GO:0009423,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259785.1;locus_tag=MK542_03740;product=chorismate synthase;protein_id=MCY7217285.1;transl_table=11 JAKUZA010000019.1 Genbank gene 35428 36534 . + . ID=gene-MK542_03745;Name=MK542_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03745 JAKUZA010000019.1 Protein Homology CDS 35428 36534 . + 0 ID=cds-MCY7217286.1;Parent=gene-MK542_03745;Dbxref=NCBI_GP:MCY7217286.1;Name=MCY7217286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003087773.1;locus_tag=MK542_03745;product=prephenate dehydrogenase;protein_id=MCY7217286.1;transl_table=11 JAKUZA010000019.1 Genbank gene 36557 36895 . + . ID=gene-MK542_03750;Name=MK542_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03750 JAKUZA010000019.1 Protein Homology CDS 36557 36895 . + 0 ID=cds-MCY7217287.1;Parent=gene-MK542_03750;Dbxref=NCBI_GP:MCY7217287.1;Name=MCY7217287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900045.1;locus_tag=MK542_03750;product=YlbF/YmcA family competence regulator;protein_id=MCY7217287.1;transl_table=11 ##sequence-region JAKUZA010000001.1 1 42640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000001.1 Genbank region 1 42640 . + . ID=JAKUZA010000001.1:1..42640;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000001.1 Genbank gene 329 928 . - . ID=gene-MK542_00005;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=MK542_00005 JAKUZA010000001.1 Protein Homology CDS 329 928 . - 0 ID=cds-MCY7216574.1;Parent=gene-MK542_00005;Dbxref=NCBI_GP:MCY7216574.1;Name=MCY7216574.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;gene=nrdG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660213.1;locus_tag=MK542_00005;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=MCY7216574.1;transl_table=11 JAKUZA010000001.1 Genbank gene 867 1439 . - . ID=gene-MK542_00010;Name=MK542_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00010 JAKUZA010000001.1 Protein Homology CDS 867 1439 . - 0 ID=cds-MCY7216575.1;Parent=gene-MK542_00010;Dbxref=NCBI_GP:MCY7216575.1;Name=MCY7216575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916698.1;locus_tag=MK542_00010;product=GNAT family N-acetyltransferase;protein_id=MCY7216575.1;transl_table=11 JAKUZA010000001.1 Genbank pseudogene 1449 1947 . - . ID=gene-MK542_00015;Name=MK542_00015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00015;pseudo=true JAKUZA010000001.1 Protein Homology CDS 1449 1947 . - 0 ID=cds-MK542_00015;Parent=gene-MK542_00015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837628.1;locus_tag=MK542_00015;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAKUZA010000001.1 Genbank gene 2000 2140 . - . ID=gene-MK542_00020;Name=MK542_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00020 JAKUZA010000001.1 Protein Homology CDS 2000 2140 . - 0 ID=cds-MCY7216576.1;Parent=gene-MK542_00020;Dbxref=NCBI_GP:MCY7216576.1;Name=MCY7216576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894059.1;locus_tag=MK542_00020;product=hypothetical protein;protein_id=MCY7216576.1;transl_table=11 JAKUZA010000001.1 Genbank gene 2142 4337 . - . ID=gene-MK542_00025;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=MK542_00025 JAKUZA010000001.1 Protein Homology CDS 2142 4337 . - 0 ID=cds-MCY7216577.1;Parent=gene-MK542_00025;Dbxref=NCBI_GP:MCY7216577.1;Name=MCY7216577.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837630.1;locus_tag=MK542_00025;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=MCY7216577.1;transl_table=11 JAKUZA010000001.1 Genbank gene 4459 6036 . - . ID=gene-MK542_00030;Name=MK542_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00030 JAKUZA010000001.1 Protein Homology CDS 4459 6036 . - 0 ID=cds-MCY7216578.1;Parent=gene-MK542_00030;Dbxref=NCBI_GP:MCY7216578.1;Name=MCY7216578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931879.1;locus_tag=MK542_00030;product=heme transporter CcmD;protein_id=MCY7216578.1;transl_table=11 JAKUZA010000001.1 Genbank gene 6293 7828 . - . ID=gene-MK542_00035;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=MK542_00035 JAKUZA010000001.1 Protein Homology CDS 6293 7828 . - 0 ID=cds-MCY7216579.1;Parent=gene-MK542_00035;Dbxref=NCBI_GP:MCY7216579.1;Name=MCY7216579.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837633.1;locus_tag=MK542_00035;product=cardiolipin synthase;protein_id=MCY7216579.1;transl_table=11 JAKUZA010000001.1 Genbank gene 7944 8429 . - . ID=gene-MK542_00040;Name=MK542_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00040 JAKUZA010000001.1 Protein Homology CDS 7944 8429 . - 0 ID=cds-MCY7216580.1;Parent=gene-MK542_00040;Dbxref=NCBI_GP:MCY7216580.1;Name=MCY7216580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916705.1;locus_tag=MK542_00040;product=SP_0198 family lipoprotein;protein_id=MCY7216580.1;transl_table=11 JAKUZA010000001.1 Genbank gene 8490 9722 . - . ID=gene-MK542_00045;Name=MK542_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00045 JAKUZA010000001.1 Protein Homology CDS 8490 9722 . - 0 ID=cds-MCY7216581.1;Parent=gene-MK542_00045;Dbxref=NCBI_GP:MCY7216581.1;Name=MCY7216581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907753.1;locus_tag=MK542_00045;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MCY7216581.1;transl_table=11 JAKUZA010000001.1 Genbank gene 9916 10227 . - . ID=gene-MK542_00050;Name=MK542_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00050 JAKUZA010000001.1 Protein Homology CDS 9916 10227 . - 0 ID=cds-MCY7216582.1;Parent=gene-MK542_00050;Dbxref=NCBI_GP:MCY7216582.1;Name=MCY7216582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809966.1;locus_tag=MK542_00050;product=DUF1292 domain-containing protein;protein_id=MCY7216582.1;transl_table=11 JAKUZA010000001.1 Genbank gene 10250 10669 . - . ID=gene-MK542_00055;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=MK542_00055 JAKUZA010000001.1 Protein Homology CDS 10250 10669 . - 0 ID=cds-MCY7216583.1;Parent=gene-MK542_00055;Dbxref=NCBI_GP:MCY7216583.1;Name=MCY7216583.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090938.1;locus_tag=MK542_00055;product=Holliday junction resolvase RuvX;protein_id=MCY7216583.1;transl_table=11 JAKUZA010000001.1 Genbank gene 10669 10935 . - . ID=gene-MK542_00060;Name=MK542_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00060 JAKUZA010000001.1 Protein Homology CDS 10669 10935 . - 0 ID=cds-MCY7216584.1;Parent=gene-MK542_00060;Dbxref=NCBI_GP:MCY7216584.1;Name=MCY7216584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250500.1;locus_tag=MK542_00060;product=IreB family regulatory phosphoprotein;protein_id=MCY7216584.1;transl_table=11 JAKUZA010000001.1 Genbank gene 11103 11660 . - . ID=gene-MK542_00065;Name=MK542_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00065 JAKUZA010000001.1 Protein Homology CDS 11103 11660 . - 0 ID=cds-MCY7216585.1;Parent=gene-MK542_00065;Dbxref=NCBI_GP:MCY7216585.1;Name=MCY7216585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591495.1;locus_tag=MK542_00065;product=hypothetical protein;protein_id=MCY7216585.1;transl_table=11 JAKUZA010000001.1 Genbank gene 11750 12316 . - . ID=gene-MK542_00070;Name=MK542_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00070 JAKUZA010000001.1 Protein Homology CDS 11750 12316 . - 0 ID=cds-MCY7216586.1;Parent=gene-MK542_00070;Dbxref=NCBI_GP:MCY7216586.1;Name=MCY7216586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899281.1;locus_tag=MK542_00070;product=hypothetical protein;protein_id=MCY7216586.1;transl_table=11 JAKUZA010000001.1 Genbank gene 12500 12898 . - . ID=gene-MK542_00075;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=MK542_00075 JAKUZA010000001.1 Protein Homology CDS 12500 12898 . - 0 ID=cds-MCY7216587.1;Parent=gene-MK542_00075;Dbxref=NCBI_GP:MCY7216587.1;Name=MCY7216587.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768833.1;locus_tag=MK542_00075;product=transcriptional regulator Spx;protein_id=MCY7216587.1;transl_table=11 JAKUZA010000001.1 Genbank gene 12984 14132 . - . ID=gene-MK542_00080;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=MK542_00080 JAKUZA010000001.1 Protein Homology CDS 12984 14132 . - 0 ID=cds-MCY7216588.1;Parent=gene-MK542_00080;Dbxref=NCBI_GP:MCY7216588.1;Name=MCY7216588.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: protein motif:HMM:TIGR02012.1;locus_tag=MK542_00080;product=recombinase RecA;protein_id=MCY7216588.1;transl_table=11 JAKUZA010000001.1 Genbank gene 14187 15443 . - . ID=gene-MK542_00085;Name=MK542_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00085 JAKUZA010000001.1 Protein Homology CDS 14187 15443 . - 0 ID=cds-MCY7216589.1;Parent=gene-MK542_00085;Dbxref=NCBI_GP:MCY7216589.1;Name=MCY7216589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131015.1;locus_tag=MK542_00085;product=competence/damage-inducible protein A;protein_id=MCY7216589.1;transl_table=11 JAKUZA010000001.1 Genbank pseudogene 15714 16111 . + . ID=gene-MK542_00090;Name=MK542_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00090;pseudo=true JAKUZA010000001.1 Protein Homology CDS 15714 16111 . + 0 ID=cds-MK542_00090;Parent=gene-MK542_00090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040579.1;locus_tag=MK542_00090;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAKUZA010000001.1 Genbank gene 16154 16711 . - . ID=gene-MK542_00095;Name=MK542_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00095 JAKUZA010000001.1 Protein Homology CDS 16154 16711 . - 0 ID=cds-MCY7216590.1;Parent=gene-MK542_00095;Dbxref=NCBI_GP:MCY7216590.1;Name=MCY7216590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605954.1;locus_tag=MK542_00095;product=GNAT family N-acetyltransferase;protein_id=MCY7216590.1;transl_table=11 JAKUZA010000001.1 Genbank gene 16783 17442 . - . ID=gene-MK542_00100;Name=MK542_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00100 JAKUZA010000001.1 Protein Homology CDS 16783 17442 . - 0 ID=cds-MCY7216591.1;Parent=gene-MK542_00100;Dbxref=NCBI_GP:MCY7216591.1;Name=MCY7216591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605955.1;locus_tag=MK542_00100;product=CPBP family intramembrane metalloprotease;protein_id=MCY7216591.1;transl_table=11 JAKUZA010000001.1 Genbank gene 17447 18001 . - . ID=gene-MK542_00105;Name=MK542_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00105 JAKUZA010000001.1 Protein Homology CDS 17447 18001 . - 0 ID=cds-MCY7216592.1;Parent=gene-MK542_00105;Dbxref=NCBI_GP:MCY7216592.1;Name=MCY7216592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920434.1;locus_tag=MK542_00105;product=DNA-3-methyladenine glycosylase I;protein_id=MCY7216592.1;transl_table=11 JAKUZA010000001.1 Genbank gene 18011 18601 . - . ID=gene-MK542_00110;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=MK542_00110 JAKUZA010000001.1 Protein Homology CDS 18011 18601 . - 0 ID=cds-MCY7216593.1;Parent=gene-MK542_00110;Dbxref=NCBI_GP:MCY7216593.1;Name=MCY7216593.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271492.1;locus_tag=MK542_00110;product=Holliday junction branch migration protein RuvA;protein_id=MCY7216593.1;transl_table=11 JAKUZA010000001.1 Genbank gene 18771 19277 . + . ID=gene-MK542_00115;Name=MK542_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00115 JAKUZA010000001.1 Protein Homology CDS 18771 19277 . + 0 ID=cds-MCY7216594.1;Parent=gene-MK542_00115;Dbxref=NCBI_GP:MCY7216594.1;Name=MCY7216594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908492.1;locus_tag=MK542_00115;product=helix-turn-helix transcriptional regulator;protein_id=MCY7216594.1;transl_table=11 JAKUZA010000001.1 Genbank gene 19261 19782 . + . ID=gene-MK542_00120;Name=MK542_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00120 JAKUZA010000001.1 Protein Homology CDS 19261 19782 . + 0 ID=cds-MCY7216595.1;Parent=gene-MK542_00120;Dbxref=NCBI_GP:MCY7216595.1;Name=MCY7216595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920438.1;locus_tag=MK542_00120;product=RDD family protein;protein_id=MCY7216595.1;transl_table=11 JAKUZA010000001.1 Genbank gene 19818 21764 . - . ID=gene-MK542_00125;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=MK542_00125 JAKUZA010000001.1 Protein Homology CDS 19818 21764 . - 0 ID=cds-MCY7216596.1;Parent=gene-MK542_00125;Dbxref=NCBI_GP:MCY7216596.1;Name=MCY7216596.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916725.1;locus_tag=MK542_00125;product=DNA mismatch repair endonuclease MutL;protein_id=MCY7216596.1;transl_table=11 JAKUZA010000001.1 Genbank gene 21949 22389 . + . ID=gene-MK542_00130;Name=MK542_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00130 JAKUZA010000001.1 Protein Homology CDS 21949 22389 . + 0 ID=cds-MCY7216597.1;Parent=gene-MK542_00130;Dbxref=NCBI_GP:MCY7216597.1;Name=MCY7216597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899297.1;locus_tag=MK542_00130;product=LytTR family DNA-binding domain-containing protein;protein_id=MCY7216597.1;transl_table=11 JAKUZA010000001.1 Genbank gene 22386 22856 . + . ID=gene-MK542_00135;Name=MK542_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00135 JAKUZA010000001.1 Protein Homology CDS 22386 22856 . + 0 ID=cds-MCY7216598.1;Parent=gene-MK542_00135;Dbxref=NCBI_GP:MCY7216598.1;Name=MCY7216598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022896.2;locus_tag=MK542_00135;product=DUF3021 domain-containing protein;protein_id=MCY7216598.1;transl_table=11 JAKUZA010000001.1 Genbank gene 22946 24097 . - . ID=gene-MK542_00140;Name=MK542_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00140 JAKUZA010000001.1 Protein Homology CDS 22946 24097 . - 0 ID=cds-MCY7216599.1;Parent=gene-MK542_00140;Dbxref=NCBI_GP:MCY7216599.1;Name=MCY7216599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862055.1;locus_tag=MK542_00140;product=iron-containing alcohol dehydrogenase;protein_id=MCY7216599.1;transl_table=11 JAKUZA010000001.1 Genbank gene 24476 27019 . - . ID=gene-MK542_00145;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=MK542_00145 JAKUZA010000001.1 Protein Homology CDS 24476 27019 . - 0 ID=cds-MCY7216600.1;Parent=gene-MK542_00145;Dbxref=NCBI_GP:MCY7216600.1;Name=MCY7216600.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894103.1;locus_tag=MK542_00145;product=DNA mismatch repair protein MutS;protein_id=MCY7216600.1;transl_table=11 JAKUZA010000001.1 Genbank gene 27136 27576 . - . ID=gene-MK542_00150;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=MK542_00150 JAKUZA010000001.1 Protein Homology CDS 27136 27576 . - 0 ID=cds-MCY7216601.1;Parent=gene-MK542_00150;Dbxref=NCBI_GP:MCY7216601.1;Name=MCY7216601.1;Ontology_term=GO:0006525;gbkey=CDS;gene=argR;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931838.1;locus_tag=MK542_00150;product=arginine repressor;protein_id=MCY7216601.1;transl_table=11 JAKUZA010000001.1 Genbank gene 27702 29390 . + . ID=gene-MK542_00155;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=MK542_00155 JAKUZA010000001.1 Protein Homology CDS 27702 29390 . + 0 ID=cds-MCY7216602.1;Parent=gene-MK542_00155;Dbxref=NCBI_GP:MCY7216602.1;Name=MCY7216602.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591476.1;locus_tag=MK542_00155;product=arginine--tRNA ligase;protein_id=MCY7216602.1;transl_table=11 JAKUZA010000001.1 Genbank gene 29497 29958 . - . ID=gene-MK542_00160;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=MK542_00160 JAKUZA010000001.1 Protein Homology CDS 29497 29958 . - 0 ID=cds-MCY7216603.1;Parent=gene-MK542_00160;Dbxref=NCBI_GP:MCY7216603.1;Name=MCY7216603.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605967.1;locus_tag=MK542_00160;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=MCY7216603.1;transl_table=11 JAKUZA010000001.1 Genbank gene 30057 30563 . - . ID=gene-MK542_00165;Name=MK542_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00165 JAKUZA010000001.1 GeneMarkS-2+ CDS 30057 30563 . - 0 ID=cds-MCY7216604.1;Parent=gene-MK542_00165;Dbxref=NCBI_GP:MCY7216604.1;Name=MCY7216604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_00165;product=hypothetical protein;protein_id=MCY7216604.1;transl_table=11 JAKUZA010000001.1 Genbank gene 30850 33111 . - . ID=gene-MK542_00170;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=MK542_00170 JAKUZA010000001.1 Protein Homology CDS 30850 33111 . - 0 ID=cds-MCY7216605.1;Parent=gene-MK542_00170;Dbxref=NCBI_GP:MCY7216605.1;Name=MCY7216605.1;Ontology_term=GO:0005977,GO:0004645;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=glycogen metabolic process|0005977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837657.1;locus_tag=MK542_00170;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=MCY7216605.1;transl_table=11 JAKUZA010000001.1 Genbank gene 33144 34655 . - . ID=gene-MK542_00175;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=MK542_00175 JAKUZA010000001.1 Protein Homology CDS 33144 34655 . - 0 ID=cds-MCY7216606.1;Parent=gene-MK542_00175;Dbxref=NCBI_GP:MCY7216606.1;Name=MCY7216606.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192609.1;locus_tag=MK542_00175;product=4-alpha-glucanotransferase;protein_id=MCY7216606.1;transl_table=11 JAKUZA010000001.1 Genbank gene 34977 36233 . + . ID=gene-MK542_00180;Name=MK542_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00180 JAKUZA010000001.1 Protein Homology CDS 34977 36233 . + 0 ID=cds-MCY7216607.1;Parent=gene-MK542_00180;Dbxref=NCBI_GP:MCY7216607.1;Name=MCY7216607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149197.1;locus_tag=MK542_00180;product=extracellular solute-binding protein;protein_id=MCY7216607.1;transl_table=11 JAKUZA010000001.1 Genbank gene 36393 37682 . + . ID=gene-MK542_00185;Name=MK542_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00185 JAKUZA010000001.1 Protein Homology CDS 36393 37682 . + 0 ID=cds-MCY7216608.1;Parent=gene-MK542_00185;Dbxref=NCBI_GP:MCY7216608.1;Name=MCY7216608.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414940.1;locus_tag=MK542_00185;product=ABC transporter permease subunit;protein_id=MCY7216608.1;transl_table=11 JAKUZA010000001.1 Genbank gene 37684 38526 . + . ID=gene-MK542_00190;Name=MK542_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00190 JAKUZA010000001.1 Protein Homology CDS 37684 38526 . + 0 ID=cds-MCY7216609.1;Parent=gene-MK542_00190;Dbxref=NCBI_GP:MCY7216609.1;Name=MCY7216609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065636.1;locus_tag=MK542_00190;product=sugar ABC transporter permease;protein_id=MCY7216609.1;transl_table=11 JAKUZA010000001.1 Genbank gene 38630 39442 . + . ID=gene-MK542_00195;Name=MK542_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00195 JAKUZA010000001.1 Protein Homology CDS 38630 39442 . + 0 ID=cds-MCY7216610.1;Parent=gene-MK542_00195;Dbxref=NCBI_GP:MCY7216610.1;Name=MCY7216610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605973.1;locus_tag=MK542_00195;product=DUF1189 family protein;protein_id=MCY7216610.1;transl_table=11 JAKUZA010000001.1 Genbank gene 39452 40435 . + . ID=gene-MK542_00200;Name=MK542_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00200 JAKUZA010000001.1 Protein Homology CDS 39452 40435 . + 0 ID=cds-MCY7216611.1;Parent=gene-MK542_00200;Dbxref=NCBI_GP:MCY7216611.1;Name=MCY7216611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894119.1;locus_tag=MK542_00200;product=LacI family DNA-binding transcriptional regulator;protein_id=MCY7216611.1;transl_table=11 JAKUZA010000001.1 Genbank gene 40445 42520 . + . ID=gene-MK542_00205;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=MK542_00205 JAKUZA010000001.1 Protein Homology CDS 40445 42520 . + 0 ID=cds-MCY7216612.1;Parent=gene-MK542_00205;Dbxref=NCBI_GP:MCY7216612.1;Name=MCY7216612.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917861.1;locus_tag=MK542_00205;product=type I pullulanase;protein_id=MCY7216612.1;transl_table=11 ##sequence-region JAKUZA010000020.1 1 7536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000020.1 Genbank region 1 7536 . + . ID=JAKUZA010000020.1:1..7536;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000020.1 Genbank gene 1 267 . + . ID=gene-MK542_03755;Name=MK542_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03755;partial=true;start_range=.,1 JAKUZA010000020.1 Protein Homology CDS 1 267 . + 0 ID=cds-MCY7217288.1;Parent=gene-MK542_03755;Dbxref=NCBI_GP:MCY7217288.1;Name=MCY7217288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268143.1;locus_tag=MK542_03755;partial=true;product=transposase;protein_id=MCY7217288.1;start_range=.,1;transl_table=11 JAKUZA010000020.1 Genbank gene 408 1829 . - . ID=gene-MK542_03760;Name=MK542_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03760 JAKUZA010000020.1 Protein Homology CDS 408 1829 . - 0 ID=cds-MCY7217289.1;Parent=gene-MK542_03760;Dbxref=NCBI_GP:MCY7217289.1;Name=MCY7217289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591052.1;locus_tag=MK542_03760;product=cell division site-positioning protein MapZ family protein;protein_id=MCY7217289.1;transl_table=11 JAKUZA010000020.1 Genbank gene 1836 2993 . - . ID=gene-MK542_03765;Name=MK542_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03765 JAKUZA010000020.1 Protein Homology CDS 1836 2993 . - 0 ID=cds-MCY7217290.1;Parent=gene-MK542_03765;Dbxref=NCBI_GP:MCY7217290.1;Name=MCY7217290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932575.1;locus_tag=MK542_03765;product=class I SAM-dependent RNA methyltransferase;protein_id=MCY7217290.1;transl_table=11 JAKUZA010000020.1 Genbank gene 3192 3559 . - . ID=gene-MK542_03770;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=MK542_03770 JAKUZA010000020.1 cmsearch RNase_P_RNA 3192 3559 . - . ID=rna-MK542_03770;Parent=gene-MK542_03770;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_03770;product=RNase P RNA component class B JAKUZA010000020.1 cmsearch exon 3192 3559 . - . ID=exon-MK542_03770-1;Parent=rna-MK542_03770;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_03770;product=RNase P RNA component class B JAKUZA010000020.1 Genbank gene 3579 3956 . - . ID=gene-MK542_03775;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=MK542_03775 JAKUZA010000020.1 Protein Homology CDS 3579 3956 . - 0 ID=cds-MCY7217291.1;Parent=gene-MK542_03775;Dbxref=NCBI_GP:MCY7217291.1;Name=MCY7217291.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893512.1;locus_tag=MK542_03775;product=cell division regulator GpsB;protein_id=MCY7217291.1;transl_table=11 JAKUZA010000020.1 Genbank gene 3986 4513 . - . ID=gene-MK542_03780;Name=MK542_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03780 JAKUZA010000020.1 Protein Homology CDS 3986 4513 . - 0 ID=cds-MCY7217292.1;Parent=gene-MK542_03780;Dbxref=NCBI_GP:MCY7217292.1;Name=MCY7217292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605370.1;locus_tag=MK542_03780;product=DUF1273 domain-containing protein;protein_id=MCY7217292.1;transl_table=11 JAKUZA010000020.1 Genbank gene 4581 5183 . + . ID=gene-MK542_03785;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=MK542_03785 JAKUZA010000020.1 Protein Homology CDS 4581 5183 . + 0 ID=cds-MCY7217293.1;Parent=gene-MK542_03785;Dbxref=NCBI_GP:MCY7217293.1;Name=MCY7217293.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659046.1;locus_tag=MK542_03785;product=Holliday junction resolvase RecU;protein_id=MCY7217293.1;transl_table=11 JAKUZA010000020.1 Genbank gene 5176 7344 . + . ID=gene-MK542_03790;Name=pbp1a;gbkey=Gene;gene=pbp1a;gene_biotype=protein_coding;locus_tag=MK542_03790 JAKUZA010000020.1 Protein Homology CDS 5176 7344 . + 0 ID=cds-MCY7217294.1;Parent=gene-MK542_03790;Dbxref=NCBI_GP:MCY7217294.1;Name=MCY7217294.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp1a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605372.1;locus_tag=MK542_03790;product=penicillin-binding protein PBP1A;protein_id=MCY7217294.1;transl_table=11 ##sequence-region JAKUZA010000021.1 1 16317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000021.1 Genbank region 1 16317 . + . ID=JAKUZA010000021.1:1..16317;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000021.1 Genbank gene 265 456 . - . ID=gene-MK542_03795;Name=MK542_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03795 JAKUZA010000021.1 Protein Homology CDS 265 456 . - 0 ID=cds-MCY7217295.1;Parent=gene-MK542_03795;Dbxref=NCBI_GP:MCY7217295.1;Name=MCY7217295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377005.1;locus_tag=MK542_03795;product=hypothetical protein;protein_id=MCY7217295.1;transl_table=11 JAKUZA010000021.1 Genbank gene 453 680 . - . ID=gene-MK542_03800;Name=MK542_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03800 JAKUZA010000021.1 Protein Homology CDS 453 680 . - 0 ID=cds-MCY7217296.1;Parent=gene-MK542_03800;Dbxref=NCBI_GP:MCY7217296.1;Name=MCY7217296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591440.1;locus_tag=MK542_03800;product=helix-turn-helix transcriptional regulator;protein_id=MCY7217296.1;transl_table=11 JAKUZA010000021.1 Genbank gene 683 1282 . - . ID=gene-MK542_03805;Name=MK542_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03805 JAKUZA010000021.1 Protein Homology CDS 683 1282 . - 0 ID=cds-MCY7217297.1;Parent=gene-MK542_03805;Dbxref=NCBI_GP:MCY7217297.1;Name=MCY7217297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899343.1;locus_tag=MK542_03805;product=DUF3796 domain-containing protein;protein_id=MCY7217297.1;transl_table=11 JAKUZA010000021.1 Genbank gene 1528 2388 . - . ID=gene-MK542_03810;Name=MK542_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03810 JAKUZA010000021.1 Protein Homology CDS 1528 2388 . - 0 ID=cds-MCY7217298.1;Parent=gene-MK542_03810;Dbxref=NCBI_GP:MCY7217298.1;Name=MCY7217298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591438.1;locus_tag=MK542_03810;product=cation diffusion facilitator family transporter;protein_id=MCY7217298.1;transl_table=11 JAKUZA010000021.1 Genbank gene 2558 3079 . + . ID=gene-MK542_03815;Name=MK542_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03815 JAKUZA010000021.1 Protein Homology CDS 2558 3079 . + 0 ID=cds-MCY7217299.1;Parent=gene-MK542_03815;Dbxref=NCBI_GP:MCY7217299.1;Name=MCY7217299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606035.1;locus_tag=MK542_03815;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7217299.1;transl_table=11 JAKUZA010000021.1 Genbank gene 3156 4328 . + . ID=gene-MK542_03820;Name=MK542_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03820 JAKUZA010000021.1 Protein Homology CDS 3156 4328 . + 0 ID=cds-MCY7217300.1;Parent=gene-MK542_03820;Dbxref=NCBI_GP:MCY7217300.1;Name=MCY7217300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030949.1;locus_tag=MK542_03820;product=MFS transporter;protein_id=MCY7217300.1;transl_table=11 JAKUZA010000021.1 Genbank gene 4323 4928 . - . ID=gene-MK542_03825;Name=MK542_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03825 JAKUZA010000021.1 Protein Homology CDS 4323 4928 . - 0 ID=cds-MCY7217301.1;Parent=gene-MK542_03825;Dbxref=NCBI_GP:MCY7217301.1;Name=MCY7217301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003071561.1;locus_tag=MK542_03825;product=DNA-3-methyladenine glycosylase;protein_id=MCY7217301.1;transl_table=11 JAKUZA010000021.1 Genbank gene 5092 5838 . + . ID=gene-MK542_03830;Name=MK542_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03830 JAKUZA010000021.1 Protein Homology CDS 5092 5838 . + 0 ID=cds-MCY7217302.1;Parent=gene-MK542_03830;Dbxref=NCBI_GP:MCY7217302.1;Name=MCY7217302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263016.1;locus_tag=MK542_03830;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCY7217302.1;transl_table=11 JAKUZA010000021.1 Genbank gene 5870 6697 . + . ID=gene-MK542_03835;Name=MK542_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03835 JAKUZA010000021.1 Protein Homology CDS 5870 6697 . + 0 ID=cds-MCY7217303.1;Parent=gene-MK542_03835;Dbxref=NCBI_GP:MCY7217303.1;Name=MCY7217303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659569.1;locus_tag=MK542_03835;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7217303.1;transl_table=11 JAKUZA010000021.1 Genbank gene 6729 7208 . - . ID=gene-MK542_03840;Name=MK542_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03840 JAKUZA010000021.1 Protein Homology CDS 6729 7208 . - 0 ID=cds-MCY7217304.1;Parent=gene-MK542_03840;Dbxref=NCBI_GP:MCY7217304.1;Name=MCY7217304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606037.1;locus_tag=MK542_03840;product=GNAT family N-acetyltransferase;protein_id=MCY7217304.1;transl_table=11 JAKUZA010000021.1 Genbank gene 7233 8504 . - . ID=gene-MK542_03845;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=MK542_03845 JAKUZA010000021.1 Protein Homology CDS 7233 8504 . - 0 ID=cds-MCY7217305.1;Parent=gene-MK542_03845;Dbxref=NCBI_GP:MCY7217305.1;Name=MCY7217305.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606038.1;locus_tag=MK542_03845;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=MCY7217305.1;transl_table=11 JAKUZA010000021.1 Genbank gene 8497 8736 . - . ID=gene-MK542_03850;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=MK542_03850 JAKUZA010000021.1 Protein Homology CDS 8497 8736 . - 0 ID=cds-MCY7217306.1;Parent=gene-MK542_03850;Dbxref=NCBI_GP:MCY7217306.1;Name=MCY7217306.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591431.1;locus_tag=MK542_03850;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=MCY7217306.1;transl_table=11 JAKUZA010000021.1 Genbank gene 8759 10003 . - . ID=gene-MK542_03855;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=MK542_03855 JAKUZA010000021.1 Protein Homology CDS 8759 10003 . - 0 ID=cds-MCY7217307.1;Parent=gene-MK542_03855;Dbxref=NCBI_GP:MCY7217307.1;Name=MCY7217307.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659556.1;locus_tag=MK542_03855;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=MCY7217307.1;transl_table=11 JAKUZA010000021.1 Genbank gene 10000 11550 . - . ID=gene-MK542_03860;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=MK542_03860 JAKUZA010000021.1 Protein Homology CDS 10000 11550 . - 0 ID=cds-MCY7217308.1;Parent=gene-MK542_03860;Dbxref=NCBI_GP:MCY7217308.1;Name=MCY7217308.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltA;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591429.1;locus_tag=MK542_03860;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=MCY7217308.1;transl_table=11 JAKUZA010000021.1 Genbank gene 11569 11700 . - . ID=gene-MK542_03865;Name=MK542_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03865 JAKUZA010000021.1 Protein Homology CDS 11569 11700 . - 0 ID=cds-MCY7217309.1;Parent=gene-MK542_03865;Dbxref=NCBI_GP:MCY7217309.1;Name=MCY7217309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262581.1;locus_tag=MK542_03865;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=MCY7217309.1;transl_table=11 JAKUZA010000021.1 Genbank gene 11967 12293 . + . ID=gene-MK542_03870;Name=MK542_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03870 JAKUZA010000021.1 Protein Homology CDS 11967 12293 . + 0 ID=cds-MCY7217310.1;Parent=gene-MK542_03870;Dbxref=NCBI_GP:MCY7217310.1;Name=MCY7217310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273865.1;locus_tag=MK542_03870;product=PadR family transcriptional regulator;protein_id=MCY7217310.1;transl_table=11 JAKUZA010000021.1 Genbank gene 12280 12879 . + . ID=gene-MK542_03875;Name=MK542_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03875 JAKUZA010000021.1 Protein Homology CDS 12280 12879 . + 0 ID=cds-MCY7217311.1;Parent=gene-MK542_03875;Dbxref=NCBI_GP:MCY7217311.1;Name=MCY7217311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591426.1;locus_tag=MK542_03875;product=DUF1700 domain-containing protein;protein_id=MCY7217311.1;transl_table=11 JAKUZA010000021.1 Genbank gene 12872 13771 . + . ID=gene-MK542_03880;Name=MK542_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03880 JAKUZA010000021.1 Protein Homology CDS 12872 13771 . + 0 ID=cds-MCY7217312.1;Parent=gene-MK542_03880;Dbxref=NCBI_GP:MCY7217312.1;Name=MCY7217312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591425.1;locus_tag=MK542_03880;product=DUF4097 domain-containing protein;protein_id=MCY7217312.1;transl_table=11 JAKUZA010000021.1 Genbank gene 13890 14843 . + . ID=gene-MK542_03885;Name=MK542_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03885 JAKUZA010000021.1 Protein Homology CDS 13890 14843 . + 0 ID=cds-MCY7217313.1;Parent=gene-MK542_03885;Dbxref=NCBI_GP:MCY7217313.1;Name=MCY7217313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913903.1;locus_tag=MK542_03885;product=LD-carboxypeptidase;protein_id=MCY7217313.1;transl_table=11 JAKUZA010000021.1 Genbank gene 14883 16133 . - . ID=gene-MK542_03890;Name=MK542_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03890 JAKUZA010000021.1 Protein Homology CDS 14883 16133 . - 0 ID=cds-MCY7217314.1;Parent=gene-MK542_03890;Dbxref=NCBI_GP:MCY7217314.1;Name=MCY7217314.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592094.1;locus_tag=MK542_03890;product=S41 family peptidase;protein_id=MCY7217314.1;transl_table=11 ##sequence-region JAKUZA010000022.1 1 1667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000022.1 Genbank region 1 1667 . + . ID=JAKUZA010000022.1:1..1667;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000022.1 Genbank gene 191 1483 . + . ID=gene-MK542_03895;Name=MK542_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03895 JAKUZA010000022.1 Protein Homology CDS 191 1483 . + 0 ID=cds-MCY7217315.1;Parent=gene-MK542_03895;Dbxref=NCBI_GP:MCY7217315.1;Name=MCY7217315.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=MK542_03895;product=IS110 family transposase;protein_id=MCY7217315.1;transl_table=11 ##sequence-region JAKUZA010000023.1 1 1429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000023.1 Genbank region 1 1429 . + . ID=JAKUZA010000023.1:1..1429;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000023.1 Genbank pseudogene 107 609 . + . ID=gene-MK542_03900;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=MK542_03900;pseudo=true JAKUZA010000023.1 Protein Homology CDS 107 609 . + 0 ID=cds-MK542_03900;Parent=gene-MK542_03900;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=MK542_03900;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 JAKUZA010000023.1 Genbank gene 582 1247 . - . ID=gene-MK542_03905;Name=MK542_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03905 JAKUZA010000023.1 Protein Homology CDS 582 1247 . - 0 ID=cds-MCY7217316.1;Parent=gene-MK542_03905;Dbxref=NCBI_GP:MCY7217316.1;Name=MCY7217316.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886406.1;locus_tag=MK542_03905;product=IS30 family transposase;protein_id=MCY7217316.1;transl_table=11 ##sequence-region JAKUZA010000024.1 1 40330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000024.1 Genbank region 1 40330 . + . ID=JAKUZA010000024.1:1..40330;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000024.1 Genbank gene 313 747 . + . ID=gene-MK542_03910;Name=MK542_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03910 JAKUZA010000024.1 Protein Homology CDS 313 747 . + 0 ID=cds-MCY7217317.1;Parent=gene-MK542_03910;Dbxref=NCBI_GP:MCY7217317.1;Name=MCY7217317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659609.1;locus_tag=MK542_03910;product=PTS fructose transporter subunit IIA;protein_id=MCY7217317.1;transl_table=11 JAKUZA010000024.1 Genbank gene 787 1281 . + . ID=gene-MK542_03915;Name=MK542_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03915 JAKUZA010000024.1 Protein Homology CDS 787 1281 . + 0 ID=cds-MCY7217318.1;Parent=gene-MK542_03915;Dbxref=NCBI_GP:MCY7217318.1;Name=MCY7217318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018031118.1;locus_tag=MK542_03915;product=PTS sugar transporter subunit IIB;protein_id=MCY7217318.1;transl_table=11 JAKUZA010000024.1 Genbank gene 1406 2251 . + . ID=gene-MK542_03920;Name=MK542_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03920 JAKUZA010000024.1 Protein Homology CDS 1406 2251 . + 0 ID=cds-MCY7217319.1;Parent=gene-MK542_03920;Dbxref=NCBI_GP:MCY7217319.1;Name=MCY7217319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298172.1;locus_tag=MK542_03920;product=PTS sugar transporter subunit IIC;protein_id=MCY7217319.1;transl_table=11 JAKUZA010000024.1 Genbank gene 2253 3092 . + . ID=gene-MK542_03925;Name=MK542_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03925 JAKUZA010000024.1 Protein Homology CDS 2253 3092 . + 0 ID=cds-MCY7217320.1;Parent=gene-MK542_03925;Dbxref=NCBI_GP:MCY7217320.1;Name=MCY7217320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003086806.1;locus_tag=MK542_03925;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MCY7217320.1;transl_table=11 JAKUZA010000024.1 Genbank gene 3110 3400 . + . ID=gene-MK542_03930;Name=MK542_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03930 JAKUZA010000024.1 Protein Homology CDS 3110 3400 . + 0 ID=cds-MCY7217321.1;Parent=gene-MK542_03930;Dbxref=NCBI_GP:MCY7217321.1;Name=MCY7217321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256757.1;locus_tag=MK542_03930;product=DUF202 domain-containing protein;protein_id=MCY7217321.1;transl_table=11 JAKUZA010000024.1 Genbank gene 3546 3827 . + . ID=gene-MK542_03935;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=MK542_03935 JAKUZA010000024.1 Protein Homology CDS 3546 3827 . + 0 ID=cds-MCY7217322.1;Parent=gene-MK542_03935;Dbxref=NCBI_GP:MCY7217322.1;Name=MCY7217322.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039258.1;locus_tag=MK542_03935;product=co-chaperone GroES;protein_id=MCY7217322.1;transl_table=11 JAKUZA010000024.1 Genbank gene 3851 5473 . + . ID=gene-MK542_03940;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=MK542_03940 JAKUZA010000024.1 Protein Homology CDS 3851 5473 . + 0 ID=cds-MCY7217323.1;Parent=gene-MK542_03940;Dbxref=NCBI_GP:MCY7217323.1;Name=MCY7217323.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595107.1;locus_tag=MK542_03940;product=chaperonin GroEL;protein_id=MCY7217323.1;transl_table=11 JAKUZA010000024.1 Genbank gene 5797 7281 . - . ID=gene-MK542_03945;Name=MK542_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03945 JAKUZA010000024.1 Protein Homology CDS 5797 7281 . - 0 ID=cds-MCY7217324.1;Parent=gene-MK542_03945;Dbxref=NCBI_GP:MCY7217324.1;Name=MCY7217324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535024.1;locus_tag=MK542_03945;product=DUF1846 domain-containing protein;protein_id=MCY7217324.1;transl_table=11 JAKUZA010000024.1 Genbank gene 7405 8469 . - . ID=gene-MK542_03950;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=MK542_03950 JAKUZA010000024.1 Protein Homology CDS 7405 8469 . - 0 ID=cds-MCY7217325.1;Parent=gene-MK542_03950;Dbxref=NCBI_GP:MCY7217325.1;Name=MCY7217325.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519237.1;locus_tag=MK542_03950;product=glutamyl aminopeptidase;protein_id=MCY7217325.1;transl_table=11 JAKUZA010000024.1 Genbank gene 8597 8881 . + . ID=gene-MK542_03955;Name=MK542_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03955 JAKUZA010000024.1 Protein Homology CDS 8597 8881 . + 0 ID=cds-MCY7217326.1;Parent=gene-MK542_03955;Dbxref=NCBI_GP:MCY7217326.1;Name=MCY7217326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604288.1;locus_tag=MK542_03955;product=DUF4651 domain-containing protein;protein_id=MCY7217326.1;transl_table=11 JAKUZA010000024.1 Genbank gene 8881 9195 . + . ID=gene-MK542_03960;Name=MK542_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03960 JAKUZA010000024.1 Protein Homology CDS 8881 9195 . + 0 ID=cds-MCY7217327.1;Parent=gene-MK542_03960;Dbxref=NCBI_GP:MCY7217327.1;Name=MCY7217327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591252.1;locus_tag=MK542_03960;product=thioredoxin family protein;protein_id=MCY7217327.1;transl_table=11 JAKUZA010000024.1 Genbank gene 9226 9852 . + . ID=gene-MK542_03965;Name=MK542_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03965 JAKUZA010000024.1 Protein Homology CDS 9226 9852 . + 0 ID=cds-MCY7217328.1;Parent=gene-MK542_03965;Dbxref=NCBI_GP:MCY7217328.1;Name=MCY7217328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466778.1;locus_tag=MK542_03965;product=DUF4479 and tRNA-binding domain-containing protein;protein_id=MCY7217328.1;transl_table=11 JAKUZA010000024.1 Genbank gene 10203 10661 . + . ID=gene-MK542_03970;Name=MK542_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03970 JAKUZA010000024.1 Protein Homology CDS 10203 10661 . + 0 ID=cds-MCY7217329.1;Parent=gene-MK542_03970;Dbxref=NCBI_GP:MCY7217329.1;Name=MCY7217329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754862.1;locus_tag=MK542_03970;product=CtsR family transcriptional regulator;protein_id=MCY7217329.1;transl_table=11 JAKUZA010000024.1 Genbank gene 10668 13097 . + . ID=gene-MK542_03975;Name=MK542_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03975 JAKUZA010000024.1 Protein Homology CDS 10668 13097 . + 0 ID=cds-MCY7217330.1;Parent=gene-MK542_03975;Dbxref=NCBI_GP:MCY7217330.1;Name=MCY7217330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928234.1;locus_tag=MK542_03975;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=MCY7217330.1;transl_table=11 JAKUZA010000024.1 Genbank gene 13113 13553 . + . ID=gene-MK542_03980;Name=MK542_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03980 JAKUZA010000024.1 Protein Homology CDS 13113 13553 . + 0 ID=cds-MCY7217331.1;Parent=gene-MK542_03980;Dbxref=NCBI_GP:MCY7217331.1;Name=MCY7217331.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026500.1;locus_tag=MK542_03980;product=GNAT family N-acetyltransferase;protein_id=MCY7217331.1;transl_table=11 JAKUZA010000024.1 Genbank pseudogene 13890 14003 . + . ID=gene-MK542_03985;Name=MK542_03985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_03985;pseudo=true JAKUZA010000024.1 Protein Homology CDS 13890 14003 . + 0 ID=cds-MK542_03985;Parent=gene-MK542_03985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922623.1;locus_tag=MK542_03985;product=DNA mismatch repair protein MutT;pseudo=true;transl_table=11 JAKUZA010000024.1 Genbank gene 14239 14913 . + . ID=gene-MK542_03990;Name=MK542_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_03990 JAKUZA010000024.1 Protein Homology CDS 14239 14913 . + 0 ID=cds-MCY7217332.1;Parent=gene-MK542_03990;Dbxref=NCBI_GP:MCY7217332.1;Name=MCY7217332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130972.1;locus_tag=MK542_03990;product=hypothetical protein;protein_id=MCY7217332.1;transl_table=11 JAKUZA010000024.1 Genbank gene 14953 15930 . - . ID=gene-MK542_03995;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=MK542_03995 JAKUZA010000024.1 Protein Homology CDS 14953 15930 . - 0 ID=cds-MCY7217333.1;Parent=gene-MK542_03995;Dbxref=NCBI_GP:MCY7217333.1;Name=MCY7217333.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809915.1;locus_tag=MK542_03995;product=tRNA dihydrouridine synthase DusB;protein_id=MCY7217333.1;transl_table=11 JAKUZA010000024.1 Genbank gene 15917 16867 . - . ID=gene-MK542_04000;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=MK542_04000 JAKUZA010000024.1 Protein Homology CDS 15917 16867 . - 0 ID=cds-MCY7217334.1;Parent=gene-MK542_04000;Dbxref=NCBI_GP:MCY7217334.1;Name=MCY7217334.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926270.1;locus_tag=MK542_04000;product=Hsp33 family molecular chaperone HslO;protein_id=MCY7217334.1;transl_table=11 JAKUZA010000024.1 Genbank gene 16903 17721 . + . ID=gene-MK542_04005;Name=MK542_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04005 JAKUZA010000024.1 Protein Homology CDS 16903 17721 . + 0 ID=cds-MCY7217335.1;Parent=gene-MK542_04005;Dbxref=NCBI_GP:MCY7217335.1;Name=MCY7217335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914136.1;locus_tag=MK542_04005;product=ADP-ribosylglycohydrolase family protein;protein_id=MCY7217335.1;transl_table=11 JAKUZA010000024.1 Genbank gene 17798 19054 . - . ID=gene-MK542_04010;Name=MK542_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04010 JAKUZA010000024.1 Protein Homology CDS 17798 19054 . - 0 ID=cds-MCY7217336.1;Parent=gene-MK542_04010;Dbxref=NCBI_GP:MCY7217336.1;Name=MCY7217336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907849.1;locus_tag=MK542_04010;product=toxic anion resistance protein;protein_id=MCY7217336.1;transl_table=11 JAKUZA010000024.1 Genbank gene 19079 19924 . - . ID=gene-MK542_04015;Name=MK542_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04015 JAKUZA010000024.1 Protein Homology CDS 19079 19924 . - 0 ID=cds-MCY7217337.1;Parent=gene-MK542_04015;Dbxref=NCBI_GP:MCY7217337.1;Name=MCY7217337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193949.1;locus_tag=MK542_04015;product=hypothetical protein;protein_id=MCY7217337.1;transl_table=11 JAKUZA010000024.1 Genbank gene 20173 22425 . - . ID=gene-MK542_04020;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=MK542_04020 JAKUZA010000024.1 Protein Homology CDS 20173 22425 . - 0 ID=cds-MCY7217338.1;Parent=gene-MK542_04020;Dbxref=NCBI_GP:MCY7217338.1;Name=MCY7217338.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193945.1;locus_tag=MK542_04020;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=MCY7217338.1;transl_table=11 JAKUZA010000024.1 Genbank gene 22728 24020 . + . ID=gene-MK542_04025;Name=MK542_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04025 JAKUZA010000024.1 Protein Homology CDS 22728 24020 . + 0 ID=cds-MCY7217339.1;Parent=gene-MK542_04025;Dbxref=NCBI_GP:MCY7217339.1;Name=MCY7217339.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011017279.1;locus_tag=MK542_04025;product=adenylosuccinate synthase;protein_id=MCY7217339.1;transl_table=11 JAKUZA010000024.1 Genbank gene 24079 24735 . + . ID=gene-MK542_04030;Name=MK542_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04030 JAKUZA010000024.1 Protein Homology CDS 24079 24735 . + 0 ID=cds-MCY7217340.1;Parent=gene-MK542_04030;Dbxref=NCBI_GP:MCY7217340.1;Name=MCY7217340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130966.1;locus_tag=MK542_04030;product=HAD family hydrolase;protein_id=MCY7217340.1;transl_table=11 JAKUZA010000024.1 Genbank gene 24917 25384 . + . ID=gene-MK542_04035;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=MK542_04035 JAKUZA010000024.1 Protein Homology CDS 24917 25384 . + 0 ID=cds-MCY7217341.1;Parent=gene-MK542_04035;Dbxref=NCBI_GP:MCY7217341.1;Name=MCY7217341.1;Ontology_term=GO:0002100,GO:0008251;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660221.1;locus_tag=MK542_04035;product=tRNA adenosine(34) deaminase TadA;protein_id=MCY7217341.1;transl_table=11 JAKUZA010000024.1 Genbank gene 25418 25515 . + . ID=gene-MK542_04040;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=MK542_04040 JAKUZA010000024.1 cmsearch SRP_RNA 25418 25515 . + . ID=rna-MK542_04040;Parent=gene-MK542_04040;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_04040;product=signal recognition particle sRNA small type JAKUZA010000024.1 cmsearch exon 25418 25515 . + . ID=exon-MK542_04040-1;Parent=rna-MK542_04040;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_04040;product=signal recognition particle sRNA small type JAKUZA010000024.1 Genbank gene 25896 26384 . - . ID=gene-MK542_04045;Name=MK542_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04045 JAKUZA010000024.1 Protein Homology CDS 25896 26384 . - 0 ID=cds-MCY7217342.1;Parent=gene-MK542_04045;Dbxref=NCBI_GP:MCY7217342.1;Name=MCY7217342.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=MK542_04045;product=IS30 family transposase;protein_id=MCY7217342.1;transl_table=11 JAKUZA010000024.1 Genbank gene 26849 28198 . + . ID=gene-MK542_04050;Name=MK542_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04050 JAKUZA010000024.1 Protein Homology CDS 26849 28198 . + 0 ID=cds-MCY7217343.1;Parent=gene-MK542_04050;Dbxref=NCBI_GP:MCY7217343.1;Name=MCY7217343.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399450.1;locus_tag=MK542_04050;product=glucose-6-phosphate isomerase;protein_id=MCY7217343.1;transl_table=11 JAKUZA010000024.1 Genbank gene 28321 29853 . + . ID=gene-MK542_04055;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=MK542_04055 JAKUZA010000024.1 Protein Homology CDS 28321 29853 . + 0 ID=cds-MCY7217344.1;Parent=gene-MK542_04055;Dbxref=NCBI_GP:MCY7217344.1;Name=MCY7217344.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041804.1;locus_tag=MK542_04055;product=glycerol kinase GlpK;protein_id=MCY7217344.1;transl_table=11 JAKUZA010000024.1 Genbank gene 30095 30772 . + . ID=gene-MK542_04060;Name=MK542_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04060 JAKUZA010000024.1 Protein Homology CDS 30095 30772 . + 0 ID=cds-MCY7217345.1;Parent=gene-MK542_04060;Dbxref=NCBI_GP:MCY7217345.1;Name=MCY7217345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928202.1;locus_tag=MK542_04060;product=response regulator transcription factor;protein_id=MCY7217345.1;transl_table=11 JAKUZA010000024.1 Genbank gene 30750 32087 . + . ID=gene-MK542_04065;Name=MK542_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04065 JAKUZA010000024.1 Protein Homology CDS 30750 32087 . + 0 ID=cds-MCY7217346.1;Parent=gene-MK542_04065;Dbxref=NCBI_GP:MCY7217346.1;Name=MCY7217346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928200.1;locus_tag=MK542_04065;product=HAMP domain-containing histidine kinase;protein_id=MCY7217346.1;transl_table=11 JAKUZA010000024.1 Genbank gene 32300 32839 . + . ID=gene-MK542_04070;Name=MK542_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04070 JAKUZA010000024.1 Protein Homology CDS 32300 32839 . + 0 ID=cds-MCY7217347.1;Parent=gene-MK542_04070;Dbxref=NCBI_GP:MCY7217347.1;Name=MCY7217347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.2;locus_tag=MK542_04070;product=PepSY domain-containing protein;protein_id=MCY7217347.1;transl_table=11 JAKUZA010000024.1 Genbank gene 33197 34546 . + . ID=gene-MK542_04075;Name=MK542_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04075 JAKUZA010000024.1 Protein Homology CDS 33197 34546 . + 0 ID=cds-MCY7217348.1;Parent=gene-MK542_04075;Dbxref=NCBI_GP:MCY7217348.1;Name=MCY7217348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591568.1;locus_tag=MK542_04075;product=hypothetical protein;protein_id=MCY7217348.1;transl_table=11 JAKUZA010000024.1 Genbank gene 34625 35605 . + . ID=gene-MK542_04080;Name=MK542_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04080 JAKUZA010000024.1 Protein Homology CDS 34625 35605 . + 0 ID=cds-MCY7217349.1;Parent=gene-MK542_04080;Dbxref=NCBI_GP:MCY7217349.1;Name=MCY7217349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592136.1;locus_tag=MK542_04080;product=hypothetical protein;protein_id=MCY7217349.1;transl_table=11 JAKUZA010000024.1 Genbank gene 35718 36608 . + . ID=gene-MK542_04085;Name=MK542_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04085 JAKUZA010000024.1 Protein Homology CDS 35718 36608 . + 0 ID=cds-MCY7217350.1;Parent=gene-MK542_04085;Dbxref=NCBI_GP:MCY7217350.1;Name=MCY7217350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899194.1;locus_tag=MK542_04085;product=hypothetical protein;protein_id=MCY7217350.1;transl_table=11 JAKUZA010000024.1 Genbank gene 37138 37836 . + . ID=gene-MK542_04090;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=MK542_04090 JAKUZA010000024.1 Protein Homology CDS 37138 37836 . + 0 ID=cds-MCY7217351.1;Parent=gene-MK542_04090;Dbxref=NCBI_GP:MCY7217351.1;Name=MCY7217351.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466315.1;locus_tag=MK542_04090;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=MCY7217351.1;transl_table=11 JAKUZA010000024.1 Genbank gene 37928 39061 . + . ID=gene-MK542_04095;Name=MK542_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04095 JAKUZA010000024.1 Protein Homology CDS 37928 39061 . + 0 ID=cds-MCY7217352.1;Parent=gene-MK542_04095;Dbxref=NCBI_GP:MCY7217352.1;Name=MCY7217352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893966.1;locus_tag=MK542_04095;product=N-acetyldiaminopimelate deacetylase;protein_id=MCY7217352.1;transl_table=11 JAKUZA010000024.1 Genbank gene 39082 39618 . + . ID=gene-MK542_04100;Name=MK542_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04100 JAKUZA010000024.1 Protein Homology CDS 39082 39618 . + 0 ID=cds-MCY7217353.1;Parent=gene-MK542_04100;Dbxref=NCBI_GP:MCY7217353.1;Name=MCY7217353.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914127.1;locus_tag=MK542_04100;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=MCY7217353.1;transl_table=11 JAKUZA010000024.1 Genbank gene 39602 40285 . + . ID=gene-MK542_04105;Name=MK542_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04105 JAKUZA010000024.1 Protein Homology CDS 39602 40285 . + 0 ID=cds-MCY7217354.1;Parent=gene-MK542_04105;Dbxref=NCBI_GP:MCY7217354.1;Name=MCY7217354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591574.1;locus_tag=MK542_04105;product=rhomboid family intramembrane serine protease;protein_id=MCY7217354.1;transl_table=11 ##sequence-region JAKUZA010000025.1 1 53166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000025.1 Genbank region 1 53166 . + . ID=JAKUZA010000025.1:1..53166;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000025.1 Genbank gene 682 1365 . - . ID=gene-MK542_04110;Name=MK542_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04110 JAKUZA010000025.1 Protein Homology CDS 682 1365 . - 0 ID=cds-MCY7217355.1;Parent=gene-MK542_04110;Dbxref=NCBI_GP:MCY7217355.1;Name=MCY7217355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660116.1;locus_tag=MK542_04110;product=hypothetical protein;protein_id=MCY7217355.1;transl_table=11 JAKUZA010000025.1 Genbank gene 1878 2474 . - . ID=gene-MK542_04115;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=MK542_04115 JAKUZA010000025.1 Protein Homology CDS 1878 2474 . - 0 ID=cds-MCY7217356.1;Parent=gene-MK542_04115;Dbxref=NCBI_GP:MCY7217356.1;Name=MCY7217356.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003004516.1;locus_tag=MK542_04115;product=DNA-directed RNA polymerase subunit delta;protein_id=MCY7217356.1;transl_table=11 JAKUZA010000025.1 Genbank gene 2637 3920 . - . ID=gene-MK542_04120;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=MK542_04120 JAKUZA010000025.1 Protein Homology CDS 2637 3920 . - 0 ID=cds-MCY7217357.1;Parent=gene-MK542_04120;Dbxref=NCBI_GP:MCY7217357.1;Name=MCY7217357.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466710.1;locus_tag=MK542_04120;product=trigger factor;protein_id=MCY7217357.1;transl_table=11 JAKUZA010000025.1 Genbank gene 4117 4683 . - . ID=gene-MK542_04125;Name=MK542_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04125 JAKUZA010000025.1 Protein Homology CDS 4117 4683 . - 0 ID=cds-MCY7217358.1;Parent=gene-MK542_04125;Dbxref=NCBI_GP:MCY7217358.1;Name=MCY7217358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270273.1;locus_tag=MK542_04125;product=TIGR01440 family protein;protein_id=MCY7217358.1;transl_table=11 JAKUZA010000025.1 Genbank gene 4711 5193 . - . ID=gene-MK542_04130;Name=MK542_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04130 JAKUZA010000025.1 Protein Homology CDS 4711 5193 . - 0 ID=cds-MCY7217359.1;Parent=gene-MK542_04130;Dbxref=NCBI_GP:MCY7217359.1;Name=MCY7217359.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898943.1;locus_tag=MK542_04130;product=ECF transporter S component;protein_id=MCY7217359.1;transl_table=11 JAKUZA010000025.1 Genbank gene 5183 5944 . - . ID=gene-MK542_04135;Name=MK542_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04135 JAKUZA010000025.1 Protein Homology CDS 5183 5944 . - 0 ID=cds-MCY7217360.1;Parent=gene-MK542_04135;Dbxref=NCBI_GP:MCY7217360.1;Name=MCY7217360.1;Ontology_term=GO:0009228,GO:0008972;gbkey=CDS;go_function=phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184219.1;locus_tag=MK542_04135;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MCY7217360.1;transl_table=11 JAKUZA010000025.1 Genbank gene 5934 6683 . - . ID=gene-MK542_04140;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=MK542_04140 JAKUZA010000025.1 Protein Homology CDS 5934 6683 . - 0 ID=cds-MCY7217361.1;Parent=gene-MK542_04140;Dbxref=NCBI_GP:MCY7217361.1;Name=MCY7217361.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999919.1;locus_tag=MK542_04140;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=MCY7217361.1;transl_table=11 JAKUZA010000025.1 Genbank gene 6750 7274 . + . ID=gene-MK542_04145;Name=MK542_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04145 JAKUZA010000025.1 Protein Homology CDS 6750 7274 . + 0 ID=cds-MCY7217362.1;Parent=gene-MK542_04145;Dbxref=NCBI_GP:MCY7217362.1;Name=MCY7217362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076100.1;locus_tag=MK542_04145;product=NUDIX domain-containing protein;protein_id=MCY7217362.1;transl_table=11 JAKUZA010000025.1 Genbank pseudogene 7595 7825 . + . ID=gene-MK542_04150;Name=MK542_04150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_04150;pseudo=true JAKUZA010000025.1 Protein Homology CDS 7595 7825 . + 0 ID=cds-MK542_04150;Parent=gene-MK542_04150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864191.1;locus_tag=MK542_04150;product=transposase;pseudo=true;transl_table=11 JAKUZA010000025.1 Genbank gene 7854 8987 . - . ID=gene-MK542_04155;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=MK542_04155 JAKUZA010000025.1 Protein Homology CDS 7854 8987 . - 0 ID=cds-MCY7217363.1;Parent=gene-MK542_04155;Dbxref=NCBI_GP:MCY7217363.1;Name=MCY7217363.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466796.1;locus_tag=MK542_04155;product=molecular chaperone DnaJ;protein_id=MCY7217363.1;transl_table=11 JAKUZA010000025.1 Genbank gene 9155 9634 . - . ID=gene-MK542_04160;Name=MK542_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04160 JAKUZA010000025.1 GeneMarkS-2+ CDS 9155 9634 . - 0 ID=cds-MCY7217364.1;Parent=gene-MK542_04160;Dbxref=NCBI_GP:MCY7217364.1;Name=MCY7217364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_04160;product=hypothetical protein;protein_id=MCY7217364.1;transl_table=11 JAKUZA010000025.1 Genbank gene 10176 11999 . - . ID=gene-MK542_04165;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=MK542_04165 JAKUZA010000025.1 Protein Homology CDS 10176 11999 . - 0 ID=cds-MCY7217365.1;Parent=gene-MK542_04165;Dbxref=NCBI_GP:MCY7217365.1;Name=MCY7217365.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=MK542_04165;product=molecular chaperone DnaK;protein_id=MCY7217365.1;transl_table=11 JAKUZA010000025.1 Genbank gene 12380 12904 . - . ID=gene-MK542_04170;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=MK542_04170 JAKUZA010000025.1 Protein Homology CDS 12380 12904 . - 0 ID=cds-MCY7217366.1;Parent=gene-MK542_04170;Dbxref=NCBI_GP:MCY7217366.1;Name=MCY7217366.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046028.1;locus_tag=MK542_04170;product=nucleotide exchange factor GrpE;protein_id=MCY7217366.1;transl_table=11 JAKUZA010000025.1 Genbank gene 12943 13977 . - . ID=gene-MK542_04175;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=MK542_04175 JAKUZA010000025.1 Protein Homology CDS 12943 13977 . - 0 ID=cds-MCY7217367.1;Parent=gene-MK542_04175;Dbxref=NCBI_GP:MCY7217367.1;Name=MCY7217367.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255741.1;locus_tag=MK542_04175;product=heat-inducible transcriptional repressor HrcA;protein_id=MCY7217367.1;transl_table=11 JAKUZA010000025.1 Genbank gene 14169 14720 . - . ID=gene-MK542_04180;Name=MK542_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04180 JAKUZA010000025.1 Protein Homology CDS 14169 14720 . - 0 ID=cds-MCY7217368.1;Parent=gene-MK542_04180;Dbxref=NCBI_GP:MCY7217368.1;Name=MCY7217368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591188.1;locus_tag=MK542_04180;product=ClbS/DfsB family four-helix bundle protein;protein_id=MCY7217368.1;transl_table=11 JAKUZA010000025.1 Genbank gene 14733 15347 . - . ID=gene-MK542_04185;Name=MK542_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04185 JAKUZA010000025.1 Protein Homology CDS 14733 15347 . - 0 ID=cds-MCY7217369.1;Parent=gene-MK542_04185;Dbxref=NCBI_GP:MCY7217369.1;Name=MCY7217369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009535185.1;locus_tag=MK542_04185;product=GyrI-like domain-containing protein;protein_id=MCY7217369.1;transl_table=11 JAKUZA010000025.1 Genbank gene 15409 16308 . - . ID=gene-MK542_04190;Name=MK542_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04190 JAKUZA010000025.1 Protein Homology CDS 15409 16308 . - 0 ID=cds-MCY7217370.1;Parent=gene-MK542_04190;Dbxref=NCBI_GP:MCY7217370.1;Name=MCY7217370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006524876.1;locus_tag=MK542_04190;product=YafY family transcriptional regulator;protein_id=MCY7217370.1;transl_table=11 JAKUZA010000025.1 Genbank gene 16426 17040 . - . ID=gene-MK542_04195;Name=MK542_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04195 JAKUZA010000025.1 Protein Homology CDS 16426 17040 . - 0 ID=cds-MCY7217371.1;Parent=gene-MK542_04195;Dbxref=NCBI_GP:MCY7217371.1;Name=MCY7217371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910676.1;locus_tag=MK542_04195;product=DUF4352 domain-containing protein;protein_id=MCY7217371.1;transl_table=11 JAKUZA010000025.1 Genbank gene 17053 17925 . - . ID=gene-MK542_04200;Name=MK542_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04200 JAKUZA010000025.1 Protein Homology CDS 17053 17925 . - 0 ID=cds-MCY7217372.1;Parent=gene-MK542_04200;Dbxref=NCBI_GP:MCY7217372.1;Name=MCY7217372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604363.1;locus_tag=MK542_04200;product=mechanosensitive ion channel family protein;protein_id=MCY7217372.1;transl_table=11 JAKUZA010000025.1 Genbank gene 18199 19632 . - . ID=gene-MK542_04205;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=MK542_04205 JAKUZA010000025.1 Protein Homology CDS 18199 19632 . - 0 ID=cds-MCY7217373.1;Parent=gene-MK542_04205;Dbxref=NCBI_GP:MCY7217373.1;Name=MCY7217373.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002302572.1;locus_tag=MK542_04205;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=MCY7217373.1;transl_table=11 JAKUZA010000025.1 Genbank gene 19632 21098 . - . ID=gene-MK542_04210;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=MK542_04210 JAKUZA010000025.1 Protein Homology CDS 19632 21098 . - 0 ID=cds-MCY7217374.1;Parent=gene-MK542_04210;Dbxref=NCBI_GP:MCY7217374.1;Name=MCY7217374.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605777.1;locus_tag=MK542_04210;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=MCY7217374.1;transl_table=11 JAKUZA010000025.1 Genbank gene 21098 21400 . - . ID=gene-MK542_04215;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=MK542_04215 JAKUZA010000025.1 Protein Homology CDS 21098 21400 . - 0 ID=cds-MCY7217375.1;Parent=gene-MK542_04215;Dbxref=NCBI_GP:MCY7217375.1;Name=MCY7217375.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147946.1;locus_tag=MK542_04215;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=MCY7217375.1;transl_table=11 JAKUZA010000025.1 Genbank gene 21608 23344 . - . ID=gene-MK542_04220;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=MK542_04220 JAKUZA010000025.1 Protein Homology CDS 21608 23344 . - 0 ID=cds-MCY7217376.1;Parent=gene-MK542_04220;Dbxref=NCBI_GP:MCY7217376.1;Name=MCY7217376.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070506.1;locus_tag=MK542_04220;product=aspartate--tRNA ligase;protein_id=MCY7217376.1;transl_table=11 JAKUZA010000025.1 Genbank gene 23655 24212 . - . ID=gene-MK542_04225;Name=MK542_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04225 JAKUZA010000025.1 Protein Homology CDS 23655 24212 . - 0 ID=cds-MCY7217377.1;Parent=gene-MK542_04225;Dbxref=NCBI_GP:MCY7217377.1;Name=MCY7217377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896307.1;locus_tag=MK542_04225;product=cysteine hydrolase;protein_id=MCY7217377.1;transl_table=11 JAKUZA010000025.1 Genbank gene 24212 25000 . - . ID=gene-MK542_04230;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=MK542_04230 JAKUZA010000025.1 Protein Homology CDS 24212 25000 . - 0 ID=cds-MCY7217378.1;Parent=gene-MK542_04230;Dbxref=NCBI_GP:MCY7217378.1;Name=MCY7217378.1;Ontology_term=GO:0006355,GO:0003700,GO:0005525,GO:0016597;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA,GTP binding|0005525||IEA,amino acid binding|0016597||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399190.1;locus_tag=MK542_04230;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=MCY7217378.1;transl_table=11 JAKUZA010000025.1 Genbank gene 25257 26471 . - . ID=gene-MK542_04235;Name=MK542_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04235 JAKUZA010000025.1 Protein Homology CDS 25257 26471 . - 0 ID=cds-MCY7217379.1;Parent=gene-MK542_04235;Dbxref=NCBI_GP:MCY7217379.1;Name=MCY7217379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836593.1;locus_tag=MK542_04235;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCY7217379.1;transl_table=11 JAKUZA010000025.1 Genbank gene 27004 27459 . + . ID=gene-MK542_04240;Name=MK542_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04240 JAKUZA010000025.1 Protein Homology CDS 27004 27459 . + 0 ID=cds-MCY7217380.1;Parent=gene-MK542_04240;Dbxref=NCBI_GP:MCY7217380.1;Name=MCY7217380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014347.1;locus_tag=MK542_04240;product=universal stress protein;protein_id=MCY7217380.1;transl_table=11 JAKUZA010000025.1 Genbank gene 27626 29023 . - . ID=gene-MK542_04245;Name=MK542_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04245 JAKUZA010000025.1 Protein Homology CDS 27626 29023 . - 0 ID=cds-MCY7217381.1;Parent=gene-MK542_04245;Dbxref=NCBI_GP:MCY7217381.1;Name=MCY7217381.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836585.1;locus_tag=MK542_04245;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7217381.1;transl_table=11 JAKUZA010000025.1 Genbank gene 29078 30040 . + . ID=gene-MK542_04250;Name=MK542_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04250 JAKUZA010000025.1 Protein Homology CDS 29078 30040 . + 0 ID=cds-MCY7217382.1;Parent=gene-MK542_04250;Dbxref=NCBI_GP:MCY7217382.1;Name=MCY7217382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522433.1;locus_tag=MK542_04250;product=asparaginase;protein_id=MCY7217382.1;transl_table=11 JAKUZA010000025.1 Genbank gene 30477 32492 . - . ID=gene-MK542_04255;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=MK542_04255 JAKUZA010000025.1 Protein Homology CDS 30477 32492 . - 0 ID=cds-MCY7217383.1;Parent=gene-MK542_04255;Dbxref=NCBI_GP:MCY7217383.1;Name=MCY7217383.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001048793.1;locus_tag=MK542_04255;product=ATP-dependent DNA helicase RecG;protein_id=MCY7217383.1;transl_table=11 JAKUZA010000025.1 Genbank gene 32598 33704 . - . ID=gene-MK542_04260;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=MK542_04260 JAKUZA010000025.1 Protein Homology CDS 32598 33704 . - 0 ID=cds-MCY7217384.1;Parent=gene-MK542_04260;Dbxref=NCBI_GP:MCY7217384.1;Name=MCY7217384.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026131.1;locus_tag=MK542_04260;product=alanine racemase;protein_id=MCY7217384.1;transl_table=11 JAKUZA010000025.1 Genbank gene 33694 34056 . - . ID=gene-MK542_04265;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=MK542_04265 JAKUZA010000025.1 Protein Homology CDS 33694 34056 . - 0 ID=cds-MCY7217385.1;Parent=gene-MK542_04265;Dbxref=NCBI_GP:MCY7217385.1;Name=MCY7217385.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929506.1;locus_tag=MK542_04265;product=holo-ACP synthase;protein_id=MCY7217385.1;transl_table=11 JAKUZA010000025.1 Genbank gene 34159 35190 . - . ID=gene-MK542_04270;Name=MK542_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04270 JAKUZA010000025.1 Protein Homology CDS 34159 35190 . - 0 ID=cds-MCY7217386.1;Parent=gene-MK542_04270;Dbxref=NCBI_GP:MCY7217386.1;Name=MCY7217386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517149.1;locus_tag=MK542_04270;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MCY7217386.1;transl_table=11 JAKUZA010000025.1 Genbank gene 35192 36223 . - . ID=gene-MK542_04275;Name=MK542_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04275 JAKUZA010000025.1 Protein Homology CDS 35192 36223 . - 0 ID=cds-MCY7217387.1;Parent=gene-MK542_04275;Dbxref=NCBI_GP:MCY7217387.1;Name=MCY7217387.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659775.1;locus_tag=MK542_04275;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MCY7217387.1;transl_table=11 JAKUZA010000025.1 Genbank gene 36237 38753 . - . ID=gene-MK542_04280;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=MK542_04280 JAKUZA010000025.1 Protein Homology CDS 36237 38753 . - 0 ID=cds-MCY7217388.1;Parent=gene-MK542_04280;Dbxref=NCBI_GP:MCY7217388.1;Name=MCY7217388.1;Ontology_term=GO:0043952,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808430.1;locus_tag=MK542_04280;product=preprotein translocase subunit SecA;protein_id=MCY7217388.1;transl_table=11 JAKUZA010000025.1 Genbank gene 39111 39629 . - . ID=gene-MK542_04285;Name=MK542_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04285 JAKUZA010000025.1 GeneMarkS-2+ CDS 39111 39629 . - 0 ID=cds-MCY7217389.1;Parent=gene-MK542_04285;Dbxref=NCBI_GP:MCY7217389.1;Name=MCY7217389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_04285;product=hypothetical protein;protein_id=MCY7217389.1;transl_table=11 JAKUZA010000025.1 Genbank gene 39645 40586 . - . ID=gene-MK542_04290;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=MK542_04290 JAKUZA010000025.1 Protein Homology CDS 39645 40586 . - 0 ID=cds-MCY7217390.1;Parent=gene-MK542_04290;Dbxref=NCBI_GP:MCY7217390.1;Name=MCY7217390.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398143.1;locus_tag=MK542_04290;product=mannose-6-phosphate isomerase%2C class I;protein_id=MCY7217390.1;transl_table=11 JAKUZA010000025.1 Genbank pseudogene 40600 40767 . - . ID=gene-MK542_04295;Name=MK542_04295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_04295;pseudo=true JAKUZA010000025.1 Protein Homology CDS 40600 40767 . - 0 ID=cds-MK542_04295;Parent=gene-MK542_04295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270247.1;locus_tag=MK542_04295;product=UTRA domain-containing protein;pseudo=true;transl_table=11 JAKUZA010000025.1 Genbank pseudogene 41251 41946 . - . ID=gene-MK542_04300;Name=MK542_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_04300;pseudo=true JAKUZA010000025.1 Protein Homology CDS 41251 41946 . - 0 ID=cds-MK542_04300;Parent=gene-MK542_04300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270230.1;locus_tag=MK542_04300;product=phosphoglycerate mutase family protein;pseudo=true;transl_table=11 JAKUZA010000025.1 Genbank gene 42001 42390 . - . ID=gene-MK542_04305;Name=MK542_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04305 JAKUZA010000025.1 GeneMarkS-2+ CDS 42001 42390 . - 0 ID=cds-MCY7217391.1;Parent=gene-MK542_04305;Dbxref=NCBI_GP:MCY7217391.1;Name=MCY7217391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_04305;product=hypothetical protein;protein_id=MCY7217391.1;transl_table=11 JAKUZA010000025.1 Genbank gene 42470 43807 . - . ID=gene-MK542_04310;Name=MK542_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04310 JAKUZA010000025.1 Protein Homology CDS 42470 43807 . - 0 ID=cds-MCY7217392.1;Parent=gene-MK542_04310;Dbxref=NCBI_GP:MCY7217392.1;Name=MCY7217392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=MK542_04310;product=PFL family protein;protein_id=MCY7217392.1;transl_table=11 JAKUZA010000025.1 Genbank gene 43819 44085 . - . ID=gene-MK542_04315;Name=MK542_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04315 JAKUZA010000025.1 Protein Homology CDS 43819 44085 . - 0 ID=cds-MCY7217393.1;Parent=gene-MK542_04315;Dbxref=NCBI_GP:MCY7217393.1;Name=MCY7217393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905356.1;locus_tag=MK542_04315;product=ACT domain-containing protein;protein_id=MCY7217393.1;transl_table=11 JAKUZA010000025.1 Genbank gene 44230 45333 . - . ID=gene-MK542_04320;Name=MK542_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04320 JAKUZA010000025.1 Protein Homology CDS 44230 45333 . - 0 ID=cds-MCY7217394.1;Parent=gene-MK542_04320;Dbxref=NCBI_GP:MCY7217394.1;Name=MCY7217394.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907453.1;locus_tag=MK542_04320;product=glycosyl hydrolase family 8;protein_id=MCY7217394.1;transl_table=11 JAKUZA010000025.1 Genbank gene 45342 46652 . - . ID=gene-MK542_04325;Name=MK542_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04325 JAKUZA010000025.1 Protein Homology CDS 45342 46652 . - 0 ID=cds-MCY7217395.1;Parent=gene-MK542_04325;Dbxref=NCBI_GP:MCY7217395.1;Name=MCY7217395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732065.1;locus_tag=MK542_04325;product=glycosyltransferase family 2 protein;protein_id=MCY7217395.1;transl_table=11 JAKUZA010000025.1 Genbank gene 46796 47584 . - . ID=gene-MK542_04330;Name=MK542_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04330 JAKUZA010000025.1 Protein Homology CDS 46796 47584 . - 0 ID=cds-MCY7217396.1;Parent=gene-MK542_04330;Dbxref=NCBI_GP:MCY7217396.1;Name=MCY7217396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026222.1;locus_tag=MK542_04330;product=hypothetical protein;protein_id=MCY7217396.1;transl_table=11 JAKUZA010000025.1 Genbank gene 47586 48734 . - . ID=gene-MK542_04335;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=MK542_04335 JAKUZA010000025.1 Protein Homology CDS 47586 48734 . - 0 ID=cds-MCY7217397.1;Parent=gene-MK542_04335;Dbxref=NCBI_GP:MCY7217397.1;Name=MCY7217397.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270220.1;locus_tag=MK542_04335;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=MCY7217397.1;transl_table=11 JAKUZA010000025.1 Genbank gene 49793 52996 . + . ID=gene-MK542_04340;Name=MK542_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04340 JAKUZA010000025.1 Protein Homology CDS 49793 52996 . + 0 ID=cds-MCY7217398.1;Parent=gene-MK542_04340;Dbxref=NCBI_GP:MCY7217398.1;Name=MCY7217398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999900.1;locus_tag=MK542_04340;product=LPXTG-anchored zinc carboxypeptidase;protein_id=MCY7217398.1;transl_table=11 ##sequence-region JAKUZA010000026.1 1 26733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000026.1 Genbank region 1 26733 . + . ID=JAKUZA010000026.1:1..26733;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000026.1 Genbank gene 1 158 . + . ID=gene-MK542_04345;Name=MK542_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04345;partial=true;start_range=.,1 JAKUZA010000026.1 Protein Homology CDS 1 158 . + 2 ID=cds-MCY7217399.1;Parent=gene-MK542_04345;Dbxref=NCBI_GP:MCY7217399.1;Name=MCY7217399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_04345;partial=true;product=IS481 family transposase;protein_id=MCY7217399.1;start_range=.,1;transl_table=11 JAKUZA010000026.1 Genbank gene 249 1517 . - . ID=gene-MK542_04350;Name=MK542_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04350 JAKUZA010000026.1 Protein Homology CDS 249 1517 . - 0 ID=cds-MCY7217400.1;Parent=gene-MK542_04350;Dbxref=NCBI_GP:MCY7217400.1;Name=MCY7217400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605871.1;locus_tag=MK542_04350;product=replication-associated recombination protein A;protein_id=MCY7217400.1;transl_table=11 JAKUZA010000026.1 Genbank gene 1605 2075 . + . ID=gene-MK542_04355;Name=MK542_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04355 JAKUZA010000026.1 Protein Homology CDS 1605 2075 . + 0 ID=cds-MCY7217401.1;Parent=gene-MK542_04355;Dbxref=NCBI_GP:MCY7217401.1;Name=MCY7217401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591596.1;locus_tag=MK542_04355;product=DUF3013 family protein;protein_id=MCY7217401.1;transl_table=11 JAKUZA010000026.1 Genbank gene 2085 2546 . + . ID=gene-MK542_04360;Name=MK542_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04360 JAKUZA010000026.1 Protein Homology CDS 2085 2546 . + 0 ID=cds-MCY7217402.1;Parent=gene-MK542_04360;Dbxref=NCBI_GP:MCY7217402.1;Name=MCY7217402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914469.1;locus_tag=MK542_04360;product=NUDIX hydrolase;protein_id=MCY7217402.1;transl_table=11 JAKUZA010000026.1 Genbank gene 2533 3003 . + . ID=gene-MK542_04365;Name=MK542_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04365 JAKUZA010000026.1 Protein Homology CDS 2533 3003 . + 0 ID=cds-MCY7217403.1;Parent=gene-MK542_04365;Dbxref=NCBI_GP:MCY7217403.1;Name=MCY7217403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914468.1;locus_tag=MK542_04365;product=GNAT family N-acetyltransferase;protein_id=MCY7217403.1;transl_table=11 JAKUZA010000026.1 Genbank gene 3144 4100 . + . ID=gene-MK542_04370;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=MK542_04370 JAKUZA010000026.1 Protein Homology CDS 3144 4100 . + 0 ID=cds-MCY7217404.1;Parent=gene-MK542_04370;Dbxref=NCBI_GP:MCY7217404.1;Name=MCY7217404.1;Ontology_term=GO:0006464,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903455.1;locus_tag=MK542_04370;product=50S ribosomal protein L11 methyltransferase;protein_id=MCY7217404.1;transl_table=11 JAKUZA010000026.1 Genbank gene 4101 4853 . + . ID=gene-MK542_04375;Name=MK542_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04375 JAKUZA010000026.1 Protein Homology CDS 4101 4853 . + 0 ID=cds-MCY7217405.1;Parent=gene-MK542_04375;Dbxref=NCBI_GP:MCY7217405.1;Name=MCY7217405.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903454.1;locus_tag=MK542_04375;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=MCY7217405.1;transl_table=11 JAKUZA010000026.1 Genbank gene 4897 7305 . - . ID=gene-MK542_04380;Name=MK542_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04380 JAKUZA010000026.1 Protein Homology CDS 4897 7305 . - 0 ID=cds-MCY7217406.1;Parent=gene-MK542_04380;Dbxref=NCBI_GP:MCY7217406.1;Name=MCY7217406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903619.1;locus_tag=MK542_04380;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=MCY7217406.1;transl_table=11 JAKUZA010000026.1 Genbank gene 7588 8304 . + . ID=gene-MK542_04385;Name=MK542_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04385 JAKUZA010000026.1 Protein Homology CDS 7588 8304 . + 0 ID=cds-MCY7217407.1;Parent=gene-MK542_04385;Dbxref=NCBI_GP:MCY7217407.1;Name=MCY7217407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749824.1;locus_tag=MK542_04385;product=hypothetical protein;protein_id=MCY7217407.1;transl_table=11 JAKUZA010000026.1 Genbank gene 8582 9283 . + . ID=gene-MK542_04390;Name=MK542_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04390 JAKUZA010000026.1 Protein Homology CDS 8582 9283 . + 0 ID=cds-MCY7217408.1;Parent=gene-MK542_04390;Dbxref=NCBI_GP:MCY7217408.1;Name=MCY7217408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749825.1;locus_tag=MK542_04390;product=hypothetical protein;protein_id=MCY7217408.1;transl_table=11 JAKUZA010000026.1 Genbank gene 9258 10541 . + . ID=gene-MK542_04395;Name=MK542_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04395 JAKUZA010000026.1 Protein Homology CDS 9258 10541 . + 0 ID=cds-MCY7217409.1;Parent=gene-MK542_04395;Dbxref=NCBI_GP:MCY7217409.1;Name=MCY7217409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133846.1;locus_tag=MK542_04395;product=DUF2974 domain-containing protein;protein_id=MCY7217409.1;transl_table=11 JAKUZA010000026.1 Genbank gene 10529 10939 . + . ID=gene-MK542_04400;Name=MK542_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04400 JAKUZA010000026.1 Protein Homology CDS 10529 10939 . + 0 ID=cds-MCY7217410.1;Parent=gene-MK542_04400;Dbxref=NCBI_GP:MCY7217410.1;Name=MCY7217410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359220.1;locus_tag=MK542_04400;product=hypothetical protein;protein_id=MCY7217410.1;transl_table=11 JAKUZA010000026.1 Genbank gene 10936 11253 . + . ID=gene-MK542_04405;Name=MK542_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04405 JAKUZA010000026.1 Protein Homology CDS 10936 11253 . + 0 ID=cds-MCY7217411.1;Parent=gene-MK542_04405;Dbxref=NCBI_GP:MCY7217411.1;Name=MCY7217411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959510.1;locus_tag=MK542_04405;product=hypothetical protein;protein_id=MCY7217411.1;transl_table=11 JAKUZA010000026.1 Genbank gene 11441 11587 . + . ID=gene-MK542_04410;Name=MK542_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04410 JAKUZA010000026.1 Protein Homology CDS 11441 11587 . + 0 ID=cds-MCY7217412.1;Parent=gene-MK542_04410;Dbxref=NCBI_GP:MCY7217412.1;Name=MCY7217412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070706.1;locus_tag=MK542_04410;product=hypothetical protein;protein_id=MCY7217412.1;transl_table=11 JAKUZA010000026.1 Genbank gene 11699 13918 . + . ID=gene-MK542_04415;Name=MK542_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04415 JAKUZA010000026.1 Protein Homology CDS 11699 13918 . + 0 ID=cds-MCY7217413.1;Parent=gene-MK542_04415;Dbxref=NCBI_GP:MCY7217413.1;Name=MCY7217413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019316080.1;locus_tag=MK542_04415;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=MCY7217413.1;transl_table=11 JAKUZA010000026.1 Genbank gene 13968 14411 . + . ID=gene-MK542_04420;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=MK542_04420 JAKUZA010000026.1 Protein Homology CDS 13968 14411 . + 0 ID=cds-MCY7217414.1;Parent=gene-MK542_04420;Dbxref=NCBI_GP:MCY7217414.1;Name=MCY7217414.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866552.1;locus_tag=MK542_04420;product=D-aminoacyl-tRNA deacylase;protein_id=MCY7217414.1;transl_table=11 JAKUZA010000026.1 Genbank gene 14749 15339 . + . ID=gene-MK542_04425;Name=MK542_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04425 JAKUZA010000026.1 Protein Homology CDS 14749 15339 . + 0 ID=cds-MCY7217415.1;Parent=gene-MK542_04425;Dbxref=NCBI_GP:MCY7217415.1;Name=MCY7217415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000358.1;locus_tag=MK542_04425;product=CDP-archaeol synthase;protein_id=MCY7217415.1;transl_table=11 JAKUZA010000026.1 Genbank gene 15336 17849 . + . ID=gene-MK542_04430;Name=MK542_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04430 JAKUZA010000026.1 Protein Homology CDS 15336 17849 . + 0 ID=cds-MCY7217416.1;Parent=gene-MK542_04430;Dbxref=NCBI_GP:MCY7217416.1;Name=MCY7217416.1;Ontology_term=GO:0016310;gbkey=CDS;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924982.1;locus_tag=MK542_04430;product=PEP-utilizing enzyme;protein_id=MCY7217416.1;transl_table=11 JAKUZA010000026.1 Genbank gene 17836 18468 . + . ID=gene-MK542_04435;Name=MK542_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04435 JAKUZA010000026.1 Protein Homology CDS 17836 18468 . + 0 ID=cds-MCY7217417.1;Parent=gene-MK542_04435;Dbxref=NCBI_GP:MCY7217417.1;Name=MCY7217417.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895691.1;locus_tag=MK542_04435;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=MCY7217417.1;transl_table=11 JAKUZA010000026.1 Genbank gene 18461 19333 . + . ID=gene-MK542_04440;Name=MK542_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04440 JAKUZA010000026.1 Protein Homology CDS 18461 19333 . + 0 ID=cds-MCY7217418.1;Parent=gene-MK542_04440;Dbxref=NCBI_GP:MCY7217418.1;Name=MCY7217418.1;Ontology_term=GO:0008654;gbkey=CDS;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660406.1;locus_tag=MK542_04440;product=phosphatidylserine decarboxylase;protein_id=MCY7217418.1;transl_table=11 JAKUZA010000026.1 Genbank gene 19318 20217 . + . ID=gene-MK542_04445;Name=MK542_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04445 JAKUZA010000026.1 Protein Homology CDS 19318 20217 . + 0 ID=cds-MCY7217419.1;Parent=gene-MK542_04445;Dbxref=NCBI_GP:MCY7217419.1;Name=MCY7217419.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895689.1;locus_tag=MK542_04445;product=UbiA family prenyltransferase;protein_id=MCY7217419.1;transl_table=11 JAKUZA010000026.1 Genbank gene 20217 22700 . + . ID=gene-MK542_04450;Name=MK542_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04450 JAKUZA010000026.1 Protein Homology CDS 20217 22700 . + 0 ID=cds-MCY7217420.1;Parent=gene-MK542_04450;Dbxref=NCBI_GP:MCY7217420.1;Name=MCY7217420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000363.1;locus_tag=MK542_04450;product=phosphoenolpyruvate synthase;protein_id=MCY7217420.1;transl_table=11 JAKUZA010000026.1 Genbank gene 22687 23760 . + . ID=gene-MK542_04455;Name=MK542_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04455 JAKUZA010000026.1 Protein Homology CDS 22687 23760 . + 0 ID=cds-MCY7217421.1;Parent=gene-MK542_04455;Dbxref=NCBI_GP:MCY7217421.1;Name=MCY7217421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917369.1;locus_tag=MK542_04455;product=hypothetical protein;protein_id=MCY7217421.1;transl_table=11 JAKUZA010000026.1 Genbank gene 23843 24634 . - . ID=gene-MK542_04460;Name=MK542_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04460 JAKUZA010000026.1 Protein Homology CDS 23843 24634 . - 0 ID=cds-MCY7217422.1;Parent=gene-MK542_04460;Dbxref=NCBI_GP:MCY7217422.1;Name=MCY7217422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591235.1;locus_tag=MK542_04460;product=DUF4037 domain-containing protein;protein_id=MCY7217422.1;transl_table=11 JAKUZA010000026.1 Genbank gene 24770 25204 . + . ID=gene-MK542_04465;Name=MK542_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04465 JAKUZA010000026.1 Protein Homology CDS 24770 25204 . + 0 ID=cds-MCY7217423.1;Parent=gene-MK542_04465;Dbxref=NCBI_GP:MCY7217423.1;Name=MCY7217423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004056026.1;locus_tag=MK542_04465;product=hypothetical protein;protein_id=MCY7217423.1;transl_table=11 JAKUZA010000026.1 Genbank gene 25257 25886 . + . ID=gene-MK542_04470;Name=MK542_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04470 JAKUZA010000026.1 Protein Homology CDS 25257 25886 . + 0 ID=cds-MCY7217424.1;Parent=gene-MK542_04470;Dbxref=NCBI_GP:MCY7217424.1;Name=MCY7217424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604325.1;locus_tag=MK542_04470;product=N-acetyltransferase;protein_id=MCY7217424.1;transl_table=11 JAKUZA010000026.1 Genbank gene 25960 26571 . + . ID=gene-MK542_04475;Name=MK542_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04475 JAKUZA010000026.1 Protein Homology CDS 25960 26571 . + 0 ID=cds-MCY7217425.1;Parent=gene-MK542_04475;Dbxref=NCBI_GP:MCY7217425.1;Name=MCY7217425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898540.1;locus_tag=MK542_04475;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217425.1;transl_table=11 ##sequence-region JAKUZA010000027.1 1 5137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000027.1 Genbank region 1 5137 . + . ID=JAKUZA010000027.1:1..5137;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000027.1 Genbank gene 289 361 . + . ID=gene-MK542_04480;Name=MK542_04480;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_04480 JAKUZA010000027.1 tRNAscan-SE tRNA 289 361 . + . ID=rna-MK542_04480;Parent=gene-MK542_04480;anticodon=(pos:322..324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04480;product=tRNA-Lys JAKUZA010000027.1 tRNAscan-SE exon 289 361 . + . ID=exon-MK542_04480-1;Parent=rna-MK542_04480;anticodon=(pos:322..324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04480;product=tRNA-Lys JAKUZA010000027.1 Genbank gene 822 1631 . + . ID=gene-MK542_04485;Name=MK542_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04485 JAKUZA010000027.1 Protein Homology CDS 822 1631 . + 0 ID=cds-MCY7217426.1;Parent=gene-MK542_04485;Dbxref=NCBI_GP:MCY7217426.1;Name=MCY7217426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153214.1;locus_tag=MK542_04485;product=HAD family hydrolase;protein_id=MCY7217426.1;transl_table=11 JAKUZA010000027.1 Genbank gene 1642 2586 . + . ID=gene-MK542_04490;Name=MK542_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04490 JAKUZA010000027.1 Protein Homology CDS 1642 2586 . + 0 ID=cds-MCY7217427.1;Parent=gene-MK542_04490;Dbxref=NCBI_GP:MCY7217427.1;Name=MCY7217427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754201.1;locus_tag=MK542_04490;product=LacI family DNA-binding transcriptional regulator;protein_id=MCY7217427.1;transl_table=11 JAKUZA010000027.1 Genbank gene 3234 4001 . - . ID=gene-MK542_04495;Name=MK542_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04495 JAKUZA010000027.1 Protein Homology CDS 3234 4001 . - 0 ID=cds-MCY7217428.1;Parent=gene-MK542_04495;Dbxref=NCBI_GP:MCY7217428.1;Name=MCY7217428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567576.1;locus_tag=MK542_04495;product=epoxyqueuosine reductase QueH;protein_id=MCY7217428.1;transl_table=11 JAKUZA010000027.1 Genbank gene 4194 4628 . - . ID=gene-MK542_04500;Name=MK542_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04500 JAKUZA010000027.1 Protein Homology CDS 4194 4628 . - 0 ID=cds-MCY7217429.1;Parent=gene-MK542_04500;Dbxref=NCBI_GP:MCY7217429.1;Name=MCY7217429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927073.1;locus_tag=MK542_04500;product=hypothetical protein;protein_id=MCY7217429.1;transl_table=11 JAKUZA010000027.1 Genbank gene 4638 4802 . - . ID=gene-MK542_04505;Name=MK542_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04505 JAKUZA010000027.1 Protein Homology CDS 4638 4802 . - 0 ID=cds-MCY7217430.1;Parent=gene-MK542_04505;Dbxref=NCBI_GP:MCY7217430.1;Name=MCY7217430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910823.1;locus_tag=MK542_04505;product=hypothetical protein;protein_id=MCY7217430.1;transl_table=11 JAKUZA010000027.1 Genbank gene 4799 5002 . - . ID=gene-MK542_04510;Name=MK542_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04510 JAKUZA010000027.1 Protein Homology CDS 4799 5002 . - 0 ID=cds-MCY7217431.1;Parent=gene-MK542_04510;Dbxref=NCBI_GP:MCY7217431.1;Name=MCY7217431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896748.1;locus_tag=MK542_04510;product=helix-turn-helix transcriptional regulator;protein_id=MCY7217431.1;transl_table=11 ##sequence-region JAKUZA010000028.1 1 23832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000028.1 Genbank region 1 23832 . + . ID=JAKUZA010000028.1:1..23832;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000028.1 Genbank gene 1 158 . + . ID=gene-MK542_04515;Name=MK542_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04515;partial=true;start_range=.,1 JAKUZA010000028.1 Protein Homology CDS 1 158 . + 2 ID=cds-MCY7217432.1;Parent=gene-MK542_04515;Dbxref=NCBI_GP:MCY7217432.1;Name=MCY7217432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_04515;partial=true;product=IS481 family transposase;protein_id=MCY7217432.1;start_range=.,1;transl_table=11 JAKUZA010000028.1 Genbank gene 222 1571 . + . ID=gene-MK542_04520;Name=MK542_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04520 JAKUZA010000028.1 GeneMarkS-2+ CDS 222 1571 . + 0 ID=cds-MCY7217433.1;Parent=gene-MK542_04520;Dbxref=NCBI_GP:MCY7217433.1;Name=MCY7217433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_04520;product=hypothetical protein;protein_id=MCY7217433.1;transl_table=11 JAKUZA010000028.1 Genbank gene 1581 2417 . + . ID=gene-MK542_04525;Name=MK542_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04525 JAKUZA010000028.1 GeneMarkS-2+ CDS 1581 2417 . + 0 ID=cds-MCY7217434.1;Parent=gene-MK542_04525;Dbxref=NCBI_GP:MCY7217434.1;Name=MCY7217434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_04525;product=hypothetical protein;protein_id=MCY7217434.1;transl_table=11 JAKUZA010000028.1 Genbank gene 2613 3530 . + . ID=gene-MK542_04530;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=MK542_04530 JAKUZA010000028.1 Protein Homology CDS 2613 3530 . + 0 ID=cds-MCY7217435.1;Parent=gene-MK542_04530;Dbxref=NCBI_GP:MCY7217435.1;Name=MCY7217435.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605691.1;locus_tag=MK542_04530;product=glycine--tRNA ligase subunit alpha;protein_id=MCY7217435.1;transl_table=11 JAKUZA010000028.1 Genbank gene 3533 5572 . + . ID=gene-MK542_04535;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=MK542_04535 JAKUZA010000028.1 Protein Homology CDS 3533 5572 . + 0 ID=cds-MCY7217436.1;Parent=gene-MK542_04535;Dbxref=NCBI_GP:MCY7217436.1;Name=MCY7217436.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000066.1;locus_tag=MK542_04535;product=glycine--tRNA ligase subunit beta;protein_id=MCY7217436.1;transl_table=11 JAKUZA010000028.1 Genbank gene 5593 5850 . + . ID=gene-MK542_04540;Name=MK542_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04540 JAKUZA010000028.1 Protein Homology CDS 5593 5850 . + 0 ID=cds-MCY7217437.1;Parent=gene-MK542_04540;Dbxref=NCBI_GP:MCY7217437.1;Name=MCY7217437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983550.1;locus_tag=MK542_04540;product=DUF896 family protein;protein_id=MCY7217437.1;transl_table=11 JAKUZA010000028.1 Genbank gene 6123 7073 . + . ID=gene-MK542_04545;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=MK542_04545 JAKUZA010000028.1 Protein Homology CDS 6123 7073 . + 0 ID=cds-MCY7217438.1;Parent=gene-MK542_04545;Dbxref=NCBI_GP:MCY7217438.1;Name=MCY7217438.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466808.1;locus_tag=MK542_04545;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=MCY7217438.1;transl_table=11 JAKUZA010000028.1 Genbank gene 7079 7402 . + . ID=gene-MK542_04550;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=MK542_04550 JAKUZA010000028.1 Protein Homology CDS 7079 7402 . + 0 ID=cds-MCY7217439.1;Parent=gene-MK542_04550;Dbxref=NCBI_GP:MCY7217439.1;Name=MCY7217439.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893529.1;locus_tag=MK542_04550;product=cell division protein FtsL;protein_id=MCY7217439.1;transl_table=11 JAKUZA010000028.1 Genbank gene 7392 9677 . + . ID=gene-MK542_04555;Name=pbp2X;gbkey=Gene;gene=pbp2X;gene_biotype=protein_coding;locus_tag=MK542_04555 JAKUZA010000028.1 Protein Homology CDS 7392 9677 . + 0 ID=cds-MCY7217440.1;Parent=gene-MK542_04555;Dbxref=NCBI_GP:MCY7217440.1;Name=MCY7217440.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2X;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926543.1;locus_tag=MK542_04555;product=penicillin-binding protein PBP2X;protein_id=MCY7217440.1;transl_table=11 JAKUZA010000028.1 Genbank gene 9679 10662 . + . ID=gene-MK542_04560;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=MK542_04560 JAKUZA010000028.1 Protein Homology CDS 9679 10662 . + 0 ID=cds-MCY7217441.1;Parent=gene-MK542_04560;Dbxref=NCBI_GP:MCY7217441.1;Name=MCY7217441.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927516.1;locus_tag=MK542_04560;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=MCY7217441.1;transl_table=11 JAKUZA010000028.1 Genbank gene 10763 12106 . + . ID=gene-MK542_04565;Name=MK542_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04565 JAKUZA010000028.1 Protein Homology CDS 10763 12106 . + 0 ID=cds-MCY7217442.1;Parent=gene-MK542_04565;Dbxref=NCBI_GP:MCY7217442.1;Name=MCY7217442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517532.1;locus_tag=MK542_04565;product=DEAD/DEAH box helicase;protein_id=MCY7217442.1;transl_table=11 JAKUZA010000028.1 Genbank gene 12316 13122 . + . ID=gene-MK542_04570;Name=MK542_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04570 JAKUZA010000028.1 Protein Homology CDS 12316 13122 . + 0 ID=cds-MCY7217443.1;Parent=gene-MK542_04570;Dbxref=NCBI_GP:MCY7217443.1;Name=MCY7217443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592287.1;locus_tag=MK542_04570;product=amino acid ABC transporter permease;protein_id=MCY7217443.1;transl_table=11 JAKUZA010000028.1 Genbank gene 13122 13865 . + . ID=gene-MK542_04575;Name=MK542_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04575 JAKUZA010000028.1 Protein Homology CDS 13122 13865 . + 0 ID=cds-MCY7217444.1;Parent=gene-MK542_04575;Dbxref=NCBI_GP:MCY7217444.1;Name=MCY7217444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397450.1;locus_tag=MK542_04575;product=amino acid ABC transporter ATP-binding protein;protein_id=MCY7217444.1;transl_table=11 JAKUZA010000028.1 Genbank gene 13973 14197 . + . ID=gene-MK542_04580;Name=MK542_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04580 JAKUZA010000028.1 Protein Homology CDS 13973 14197 . + 0 ID=cds-MCY7217445.1;Parent=gene-MK542_04580;Dbxref=NCBI_GP:MCY7217445.1;Name=MCY7217445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896945.1;locus_tag=MK542_04580;product=DUF4059 family protein;protein_id=MCY7217445.1;transl_table=11 JAKUZA010000028.1 Genbank gene 14264 15175 . + . ID=gene-MK542_04585;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=MK542_04585 JAKUZA010000028.1 Protein Homology CDS 14264 15175 . + 0 ID=cds-MCY7217446.1;Parent=gene-MK542_04585;Dbxref=NCBI_GP:MCY7217446.1;Name=MCY7217446.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592292.1;locus_tag=MK542_04585;product=thioredoxin-disulfide reductase;protein_id=MCY7217446.1;transl_table=11 JAKUZA010000028.1 Genbank gene 15471 18644 . + . ID=gene-MK542_04590;Name=MK542_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04590 JAKUZA010000028.1 Protein Homology CDS 15471 18644 . + 0 ID=cds-MCY7217447.1;Parent=gene-MK542_04590;Dbxref=NCBI_GP:MCY7217447.1;Name=MCY7217447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605306.1;locus_tag=MK542_04590;product=GBS Bsp-like repeat-containing protein;protein_id=MCY7217447.1;transl_table=11 JAKUZA010000028.1 Genbank gene 18937 20334 . + . ID=gene-MK542_04595;Name=MK542_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04595 JAKUZA010000028.1 Protein Homology CDS 18937 20334 . + 0 ID=cds-MCY7217448.1;Parent=gene-MK542_04595;Dbxref=NCBI_GP:MCY7217448.1;Name=MCY7217448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073715.1;locus_tag=MK542_04595;product=amino acid permease;protein_id=MCY7217448.1;transl_table=11 JAKUZA010000028.1 Genbank gene 20863 22323 . + . ID=gene-MK542_04600;Name=MK542_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04600 JAKUZA010000028.1 Protein Homology CDS 20863 22323 . + 0 ID=cds-MCY7217449.1;Parent=gene-MK542_04600;Dbxref=NCBI_GP:MCY7217449.1;Name=MCY7217449.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185612.1;locus_tag=MK542_04600;product=nicotinate phosphoribosyltransferase;protein_id=MCY7217449.1;transl_table=11 JAKUZA010000028.1 Genbank gene 22320 23144 . + . ID=gene-MK542_04605;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=MK542_04605 JAKUZA010000028.1 Protein Homology CDS 22320 23144 . + 0 ID=cds-MCY7217450.1;Parent=gene-MK542_04605;Dbxref=NCBI_GP:MCY7217450.1;Name=MCY7217450.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591064.1;locus_tag=MK542_04605;product=ammonia-dependent NAD(+) synthetase;protein_id=MCY7217450.1;transl_table=11 JAKUZA010000028.1 Genbank gene 23192 23779 . + . ID=gene-MK542_04610;Name=MK542_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04610 JAKUZA010000028.1 Protein Homology CDS 23192 23779 . + 0 ID=cds-MCY7217451.1;Parent=gene-MK542_04610;Dbxref=NCBI_GP:MCY7217451.1;Name=MCY7217451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378600.1;locus_tag=MK542_04610;product=GNAT family N-acetyltransferase;protein_id=MCY7217451.1;transl_table=11 ##sequence-region JAKUZA010000029.1 1 10339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000029.1 Genbank region 1 10339 . + . ID=JAKUZA010000029.1:1..10339;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000029.1 Genbank gene 97 1329 . - . ID=gene-MK542_04615;Name=MK542_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04615 JAKUZA010000029.1 Protein Homology CDS 97 1329 . - 0 ID=cds-MCY7217452.1;Parent=gene-MK542_04615;Dbxref=NCBI_GP:MCY7217452.1;Name=MCY7217452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932488.1;locus_tag=MK542_04615;product=transporter;protein_id=MCY7217452.1;transl_table=11 JAKUZA010000029.1 Genbank gene 1586 2119 . + . ID=gene-MK542_04620;Name=MK542_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04620 JAKUZA010000029.1 Protein Homology CDS 1586 2119 . + 0 ID=cds-MCY7217453.1;Parent=gene-MK542_04620;Dbxref=NCBI_GP:MCY7217453.1;Name=MCY7217453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907072.1;locus_tag=MK542_04620;product=YceD family protein;protein_id=MCY7217453.1;transl_table=11 JAKUZA010000029.1 Genbank gene 2333 3796 . + . ID=gene-MK542_04625;Name=MK542_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04625 JAKUZA010000029.1 Protein Homology CDS 2333 3796 . + 0 ID=cds-MCY7217454.1;Parent=gene-MK542_04625;Dbxref=NCBI_GP:MCY7217454.1;Name=MCY7217454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605582.1;locus_tag=MK542_04625;product=SPFH domain-containing protein;protein_id=MCY7217454.1;transl_table=11 JAKUZA010000029.1 Genbank gene 3960 5384 . + . ID=gene-MK542_04630;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=MK542_04630 JAKUZA010000029.1 Protein Homology CDS 3960 5384 . + 0 ID=cds-MCY7217455.1;Parent=gene-MK542_04630;Dbxref=NCBI_GP:MCY7217455.1;Name=MCY7217455.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185725.1;locus_tag=MK542_04630;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=MCY7217455.1;transl_table=11 JAKUZA010000029.1 Genbank gene 5394 6083 . + . ID=gene-MK542_04635;Name=MK542_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04635 JAKUZA010000029.1 Protein Homology CDS 5394 6083 . + 0 ID=cds-MCY7217456.1;Parent=gene-MK542_04635;Dbxref=NCBI_GP:MCY7217456.1;Name=MCY7217456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837380.1;locus_tag=MK542_04635;product=response regulator transcription factor;protein_id=MCY7217456.1;transl_table=11 JAKUZA010000029.1 Genbank gene 6429 8618 . + . ID=gene-MK542_04640;Name=MK542_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04640 JAKUZA010000029.1 Protein Homology CDS 6429 8618 . + 0 ID=cds-MCY7217457.1;Parent=gene-MK542_04640;Dbxref=NCBI_GP:MCY7217457.1;Name=MCY7217457.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931437.1;locus_tag=MK542_04640;product=PTS transporter subunit IIBC;protein_id=MCY7217457.1;transl_table=11 JAKUZA010000029.1 Genbank gene 8636 9451 . + . ID=gene-MK542_04645;Name=MK542_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04645 JAKUZA010000029.1 Protein Homology CDS 8636 9451 . + 0 ID=cds-MCY7217458.1;Parent=gene-MK542_04645;Dbxref=NCBI_GP:MCY7217458.1;Name=MCY7217458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023588.1;locus_tag=MK542_04645;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MCY7217458.1;transl_table=11 JAKUZA010000029.1 Genbank gene 9650 10306 . + . ID=gene-MK542_04650;Name=MK542_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04650 JAKUZA010000029.1 Protein Homology CDS 9650 10306 . + 0 ID=cds-MCY7217459.1;Parent=gene-MK542_04650;Dbxref=NCBI_GP:MCY7217459.1;Name=MCY7217459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256822.1;locus_tag=MK542_04650;product=CBS domain-containing protein;protein_id=MCY7217459.1;transl_table=11 ##sequence-region JAKUZA010000002.1 1 13029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000002.1 Genbank region 1 13029 . + . ID=JAKUZA010000002.1:1..13029;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000002.1 Genbank gene 1 67 . - . ID=gene-MK542_00210;Name=MK542_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00210;partial=true;start_range=.,1 JAKUZA010000002.1 Protein Homology CDS 1 67 . - 0 ID=cds-MCY7216613.1;Parent=gene-MK542_00210;Dbxref=NCBI_GP:MCY7216613.1;Name=MCY7216613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775157.1;locus_tag=MK542_00210;partial=true;product=IS200/IS605 family transposase;protein_id=MCY7216613.1;start_range=.,1;transl_table=11 JAKUZA010000002.1 Genbank gene 303 1658 . + . ID=gene-MK542_00215;Name=MK542_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00215 JAKUZA010000002.1 Protein Homology CDS 303 1658 . + 0 ID=cds-MCY7216614.1;Parent=gene-MK542_00215;Dbxref=NCBI_GP:MCY7216614.1;Name=MCY7216614.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278532.1;locus_tag=MK542_00215;product=MATE family efflux transporter;protein_id=MCY7216614.1;transl_table=11 JAKUZA010000002.1 Genbank gene 1949 2131 . - . ID=gene-MK542_00220;Name=MK542_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00220 JAKUZA010000002.1 Protein Homology CDS 1949 2131 . - 0 ID=cds-MCY7216615.1;Parent=gene-MK542_00220;Dbxref=NCBI_GP:MCY7216615.1;Name=MCY7216615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589823.1;locus_tag=MK542_00220;product=4-oxalocrotonate tautomerase;protein_id=MCY7216615.1;transl_table=11 JAKUZA010000002.1 Genbank gene 2255 2827 . + . ID=gene-MK542_00225;Name=MK542_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00225 JAKUZA010000002.1 Protein Homology CDS 2255 2827 . + 0 ID=cds-MCY7216616.1;Parent=gene-MK542_00225;Dbxref=NCBI_GP:MCY7216616.1;Name=MCY7216616.1;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660308.1;locus_tag=MK542_00225;product=thymidine kinase;protein_id=MCY7216616.1;transl_table=11 JAKUZA010000002.1 Genbank gene 2864 3943 . + . ID=gene-MK542_00230;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=MK542_00230 JAKUZA010000002.1 Protein Homology CDS 2864 3943 . + 0 ID=cds-MCY7216617.1;Parent=gene-MK542_00230;Dbxref=NCBI_GP:MCY7216617.1;Name=MCY7216617.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262255.1;locus_tag=MK542_00230;product=peptide chain release factor 1;protein_id=MCY7216617.1;transl_table=11 JAKUZA010000002.1 Genbank gene 3943 4773 . + . ID=gene-MK542_00235;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=MK542_00235 JAKUZA010000002.1 Protein Homology CDS 3943 4773 . + 0 ID=cds-MCY7216618.1;Parent=gene-MK542_00235;Dbxref=NCBI_GP:MCY7216618.1;Name=MCY7216618.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902890.1;locus_tag=MK542_00235;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=MCY7216618.1;transl_table=11 JAKUZA010000002.1 Genbank gene 4766 5356 . + . ID=gene-MK542_00240;Name=MK542_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00240 JAKUZA010000002.1 Protein Homology CDS 4766 5356 . + 0 ID=cds-MCY7216619.1;Parent=gene-MK542_00240;Dbxref=NCBI_GP:MCY7216619.1;Name=MCY7216619.1;Ontology_term=GO:0006400;gbkey=CDS;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186921.1;locus_tag=MK542_00240;product=threonylcarbamoyl-AMP synthase;protein_id=MCY7216619.1;transl_table=11 JAKUZA010000002.1 Genbank gene 5404 6666 . + . ID=gene-MK542_00245;Name=MK542_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00245 JAKUZA010000002.1 Protein Homology CDS 5404 6666 . + 0 ID=cds-MCY7216620.1;Parent=gene-MK542_00245;Dbxref=NCBI_GP:MCY7216620.1;Name=MCY7216620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836954.1;locus_tag=MK542_00245;product=serine hydroxymethyltransferase;protein_id=MCY7216620.1;transl_table=11 JAKUZA010000002.1 Genbank gene 6668 7642 . + . ID=gene-MK542_00250;Name=MK542_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00250 JAKUZA010000002.1 Protein Homology CDS 6668 7642 . + 0 ID=cds-MCY7216621.1;Parent=gene-MK542_00250;Dbxref=NCBI_GP:MCY7216621.1;Name=MCY7216621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153495.1;locus_tag=MK542_00250;product=nucleoid-associated protein;protein_id=MCY7216621.1;transl_table=11 JAKUZA010000002.1 Genbank gene 7642 8244 . + . ID=gene-MK542_00255;Name=MK542_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00255 JAKUZA010000002.1 Protein Homology CDS 7642 8244 . + 0 ID=cds-MCY7216622.1;Parent=gene-MK542_00255;Dbxref=NCBI_GP:MCY7216622.1;Name=MCY7216622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186912.1;locus_tag=MK542_00255;product=lysozyme family protein;protein_id=MCY7216622.1;transl_table=11 JAKUZA010000002.1 Genbank gene 8483 13029 . + . ID=gene-MK542_00260;Name=MK542_00260;end_range=13029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00260;partial=true JAKUZA010000002.1 Protein Homology CDS 8483 13029 . + 0 ID=cds-MCY7216623.1;Parent=gene-MK542_00260;Dbxref=NCBI_GP:MCY7216623.1;Name=MCY7216623.1;end_range=13029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026507.1;locus_tag=MK542_00260;partial=true;product=Cna B-type domain-containing protein;protein_id=MCY7216623.1;transl_table=11 ##sequence-region JAKUZA010000030.1 1 42763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000030.1 Genbank region 1 42763 . + . ID=JAKUZA010000030.1:1..42763;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000030.1 Genbank pseudogene 1 238 . + . ID=gene-MK542_04655;Name=MK542_04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_04655;pseudo=true JAKUZA010000030.1 Protein Homology CDS 1 238 . + 2 ID=cds-MK542_04655;Parent=gene-MK542_04655;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943028.1;locus_tag=MK542_04655;product=transposase;pseudo=true;transl_table=11 JAKUZA010000030.1 Genbank gene 340 1056 . - . ID=gene-MK542_04660;Name=MK542_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04660 JAKUZA010000030.1 Protein Homology CDS 340 1056 . - 0 ID=cds-MCY7217460.1;Parent=gene-MK542_04660;Dbxref=NCBI_GP:MCY7217460.1;Name=MCY7217460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604432.1;locus_tag=MK542_04660;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=MCY7217460.1;transl_table=11 JAKUZA010000030.1 Genbank gene 1228 1313 . - . ID=gene-MK542_04665;Name=MK542_04665;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_04665 JAKUZA010000030.1 tRNAscan-SE tRNA 1228 1313 . - . ID=rna-MK542_04665;Parent=gene-MK542_04665;anticodon=(pos:complement(1277..1279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04665;product=tRNA-Leu JAKUZA010000030.1 tRNAscan-SE exon 1228 1313 . - . ID=exon-MK542_04665-1;Parent=rna-MK542_04665;anticodon=(pos:complement(1277..1279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04665;product=tRNA-Leu JAKUZA010000030.1 Genbank gene 1459 1944 . - . ID=gene-MK542_04670;Name=MK542_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04670 JAKUZA010000030.1 Protein Homology CDS 1459 1944 . - 0 ID=cds-MCY7217461.1;Parent=gene-MK542_04670;Dbxref=NCBI_GP:MCY7217461.1;Name=MCY7217461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894314.1;locus_tag=MK542_04670;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCY7217461.1;transl_table=11 JAKUZA010000030.1 Genbank gene 2185 3111 . - . ID=gene-MK542_04675;Name=MK542_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04675 JAKUZA010000030.1 Protein Homology CDS 2185 3111 . - 0 ID=cds-MCY7217462.1;Parent=gene-MK542_04675;Dbxref=NCBI_GP:MCY7217462.1;Name=MCY7217462.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927635.1;locus_tag=MK542_04675;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217462.1;transl_table=11 JAKUZA010000030.1 Genbank gene 3122 4189 . - . ID=gene-MK542_04680;Name=MK542_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04680 JAKUZA010000030.1 Protein Homology CDS 3122 4189 . - 0 ID=cds-MCY7217463.1;Parent=gene-MK542_04680;Dbxref=NCBI_GP:MCY7217463.1;Name=MCY7217463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927637.1;locus_tag=MK542_04680;product=ABC transporter ATP-binding protein;protein_id=MCY7217463.1;transl_table=11 JAKUZA010000030.1 Genbank gene 4198 5124 . - . ID=gene-MK542_04685;Name=MK542_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04685 JAKUZA010000030.1 Protein Homology CDS 4198 5124 . - 0 ID=cds-MCY7217464.1;Parent=gene-MK542_04685;Dbxref=NCBI_GP:MCY7217464.1;Name=MCY7217464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730677.1;locus_tag=MK542_04685;product=ABC transporter permease;protein_id=MCY7217464.1;transl_table=11 JAKUZA010000030.1 Genbank gene 5124 6620 . - . ID=gene-MK542_04690;Name=MK542_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04690 JAKUZA010000030.1 Protein Homology CDS 5124 6620 . - 0 ID=cds-MCY7217465.1;Parent=gene-MK542_04690;Dbxref=NCBI_GP:MCY7217465.1;Name=MCY7217465.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184189.1;locus_tag=MK542_04690;product=ABC transporter permease subunit;protein_id=MCY7217465.1;transl_table=11 JAKUZA010000030.1 Genbank gene 6686 8662 . - . ID=gene-MK542_04695;Name=MK542_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04695 JAKUZA010000030.1 Protein Homology CDS 6686 8662 . - 0 ID=cds-MCY7217466.1;Parent=gene-MK542_04695;Dbxref=NCBI_GP:MCY7217466.1;Name=MCY7217466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026186.1;locus_tag=MK542_04695;product=peptide ABC transporter substrate-binding protein;protein_id=MCY7217466.1;transl_table=11 JAKUZA010000030.1 Genbank gene 8836 10794 . - . ID=gene-MK542_04700;Name=MK542_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04700 JAKUZA010000030.1 Protein Homology CDS 8836 10794 . - 0 ID=cds-MCY7217467.1;Parent=gene-MK542_04700;Dbxref=NCBI_GP:MCY7217467.1;Name=MCY7217467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605696.1;locus_tag=MK542_04700;product=peptide ABC transporter substrate-binding protein;protein_id=MCY7217467.1;transl_table=11 JAKUZA010000030.1 Genbank gene 11073 12368 . + . ID=gene-MK542_04705;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=MK542_04705 JAKUZA010000030.1 Protein Homology CDS 11073 12368 . + 0 ID=cds-MCY7217468.1;Parent=gene-MK542_04705;Dbxref=NCBI_GP:MCY7217468.1;Name=MCY7217468.1;gbkey=CDS;gene=pbp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908870.1;locus_tag=MK542_04705;product=D-alanyl-D-alanine carboxypeptidase PBP3;protein_id=MCY7217468.1;transl_table=11 JAKUZA010000030.1 Genbank gene 12562 13974 . - . ID=gene-MK542_04710;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=MK542_04710 JAKUZA010000030.1 Protein Homology CDS 12562 13974 . - 0 ID=cds-MCY7217469.1;Parent=gene-MK542_04710;Dbxref=NCBI_GP:MCY7217469.1;Name=MCY7217469.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397186.1;locus_tag=MK542_04710;product=Fe-S cluster assembly protein SufB;protein_id=MCY7217469.1;transl_table=11 JAKUZA010000030.1 Genbank gene 13992 14429 . - . ID=gene-MK542_04715;Name=MK542_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04715 JAKUZA010000030.1 Protein Homology CDS 13992 14429 . - 0 ID=cds-MCY7217470.1;Parent=gene-MK542_04715;Dbxref=NCBI_GP:MCY7217470.1;Name=MCY7217470.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905277.1;locus_tag=MK542_04715;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=MCY7217470.1;transl_table=11 JAKUZA010000030.1 Genbank gene 14416 15648 . - . ID=gene-MK542_04720;Name=MK542_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04720 JAKUZA010000030.1 Protein Homology CDS 14416 15648 . - 0 ID=cds-MCY7217471.1;Parent=gene-MK542_04720;Dbxref=NCBI_GP:MCY7217471.1;Name=MCY7217471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927654.1;locus_tag=MK542_04720;product=cysteine desulfurase;protein_id=MCY7217471.1;transl_table=11 JAKUZA010000030.1 Genbank gene 15690 16952 . - . ID=gene-MK542_04725;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=MK542_04725 JAKUZA010000030.1 Protein Homology CDS 15690 16952 . - 0 ID=cds-MCY7217472.1;Parent=gene-MK542_04725;Dbxref=NCBI_GP:MCY7217472.1;Name=MCY7217472.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130766.1;locus_tag=MK542_04725;product=Fe-S cluster assembly protein SufD;protein_id=MCY7217472.1;transl_table=11 JAKUZA010000030.1 Genbank gene 16994 17764 . - . ID=gene-MK542_04730;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=MK542_04730 JAKUZA010000030.1 Protein Homology CDS 16994 17764 . - 0 ID=cds-MCY7217473.1;Parent=gene-MK542_04730;Dbxref=NCBI_GP:MCY7217473.1;Name=MCY7217473.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893635.1;locus_tag=MK542_04730;product=Fe-S cluster assembly ATPase SufC;protein_id=MCY7217473.1;transl_table=11 JAKUZA010000030.1 Genbank gene 17988 19148 . - . ID=gene-MK542_04735;Name=MK542_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04735 JAKUZA010000030.1 Protein Homology CDS 17988 19148 . - 0 ID=cds-MCY7217474.1;Parent=gene-MK542_04735;Dbxref=NCBI_GP:MCY7217474.1;Name=MCY7217474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262748.1;locus_tag=MK542_04735;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=MCY7217474.1;transl_table=11 JAKUZA010000030.1 Genbank gene 19145 19894 . - . ID=gene-MK542_04740;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=MK542_04740 JAKUZA010000030.1 Protein Homology CDS 19145 19894 . - 0 ID=cds-MCY7217475.1;Parent=gene-MK542_04740;Dbxref=NCBI_GP:MCY7217475.1;Name=MCY7217475.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193310.1;locus_tag=MK542_04740;product=adaptor protein MecA;protein_id=MCY7217475.1;transl_table=11 JAKUZA010000030.1 Genbank gene 20008 20850 . - . ID=gene-MK542_04745;Name=MK542_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04745 JAKUZA010000030.1 Protein Homology CDS 20008 20850 . - 0 ID=cds-MCY7217476.1;Parent=gene-MK542_04745;Dbxref=NCBI_GP:MCY7217476.1;Name=MCY7217476.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837466.1;locus_tag=MK542_04745;product=undecaprenyl-diphosphate phosphatase;protein_id=MCY7217476.1;transl_table=11 JAKUZA010000030.1 Genbank gene 20939 22834 . - . ID=gene-MK542_04750;Name=MK542_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04750 JAKUZA010000030.1 Protein Homology CDS 20939 22834 . - 0 ID=cds-MCY7217477.1;Parent=gene-MK542_04750;Dbxref=NCBI_GP:MCY7217477.1;Name=MCY7217477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591763.1;locus_tag=MK542_04750;product=DUF2207 domain-containing protein;protein_id=MCY7217477.1;transl_table=11 JAKUZA010000030.1 Genbank gene 22962 24527 . + . ID=gene-MK542_04755;Name=MK542_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04755 JAKUZA010000030.1 Protein Homology CDS 22962 24527 . + 0 ID=cds-MCY7217478.1;Parent=gene-MK542_04755;Dbxref=NCBI_GP:MCY7217478.1;Name=MCY7217478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592314.1;locus_tag=MK542_04755;product=ABC transporter substrate-binding protein/permease;protein_id=MCY7217478.1;transl_table=11 JAKUZA010000030.1 Genbank gene 24524 25264 . + . ID=gene-MK542_04760;Name=MK542_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04760 JAKUZA010000030.1 Protein Homology CDS 24524 25264 . + 0 ID=cds-MCY7217479.1;Parent=gene-MK542_04760;Dbxref=NCBI_GP:MCY7217479.1;Name=MCY7217479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070309.1;locus_tag=MK542_04760;product=amino acid ABC transporter ATP-binding protein;protein_id=MCY7217479.1;transl_table=11 JAKUZA010000030.1 Genbank gene 25355 25570 . - . ID=gene-MK542_04765;Name=MK542_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04765 JAKUZA010000030.1 Protein Homology CDS 25355 25570 . - 0 ID=cds-MCY7217480.1;Parent=gene-MK542_04765;Dbxref=NCBI_GP:MCY7217480.1;Name=MCY7217480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893653.1;locus_tag=MK542_04765;product=hypothetical protein;protein_id=MCY7217480.1;transl_table=11 JAKUZA010000030.1 Genbank gene 25676 26575 . - . ID=gene-MK542_04770;Name=MK542_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04770 JAKUZA010000030.1 Protein Homology CDS 25676 26575 . - 0 ID=cds-MCY7217481.1;Parent=gene-MK542_04770;Dbxref=NCBI_GP:MCY7217481.1;Name=MCY7217481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893654.1;locus_tag=MK542_04770;product=SPFH domain-containing protein;protein_id=MCY7217481.1;transl_table=11 JAKUZA010000030.1 Genbank gene 26669 27919 . - . ID=gene-MK542_04775;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=MK542_04775 JAKUZA010000030.1 Protein Homology CDS 26669 27919 . - 0 ID=cds-MCY7217482.1;Parent=gene-MK542_04775;Dbxref=NCBI_GP:MCY7217482.1;Name=MCY7217482.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006151817.1;locus_tag=MK542_04775;product=threonine ammonia-lyase IlvA;protein_id=MCY7217482.1;transl_table=11 JAKUZA010000030.1 Genbank gene 27986 29008 . - . ID=gene-MK542_04780;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=MK542_04780 JAKUZA010000030.1 Protein Homology CDS 27986 29008 . - 0 ID=cds-MCY7217483.1;Parent=gene-MK542_04780;Dbxref=NCBI_GP:MCY7217483.1;Name=MCY7217483.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145054.1;locus_tag=MK542_04780;product=ketol-acid reductoisomerase;protein_id=MCY7217483.1;transl_table=11 JAKUZA010000030.1 Genbank gene 29074 29550 . - . ID=gene-MK542_04785;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=MK542_04785 JAKUZA010000030.1 Protein Homology CDS 29074 29550 . - 0 ID=cds-MCY7217484.1;Parent=gene-MK542_04785;Dbxref=NCBI_GP:MCY7217484.1;Name=MCY7217484.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=MK542_04785;product=acetolactate synthase small subunit;protein_id=MCY7217484.1;transl_table=11 JAKUZA010000030.1 Genbank gene 29543 31243 . - . ID=gene-MK542_04790;Name=MK542_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04790 JAKUZA010000030.1 Protein Homology CDS 29543 31243 . - 0 ID=cds-MCY7217485.1;Parent=gene-MK542_04790;Dbxref=NCBI_GP:MCY7217485.1;Name=MCY7217485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411733.1;locus_tag=MK542_04790;product=acetolactate synthase large subunit;protein_id=MCY7217485.1;transl_table=11 JAKUZA010000030.1 Genbank gene 31521 32120 . - . ID=gene-MK542_04795;Name=MK542_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04795 JAKUZA010000030.1 Protein Homology CDS 31521 32120 . - 0 ID=cds-MCY7217486.1;Parent=gene-MK542_04795;Dbxref=NCBI_GP:MCY7217486.1;Name=MCY7217486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908843.1;locus_tag=MK542_04795;product=response regulator transcription factor;protein_id=MCY7217486.1;transl_table=11 JAKUZA010000030.1 Genbank gene 32117 33223 . - . ID=gene-MK542_04800;Name=MK542_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04800 JAKUZA010000030.1 Protein Homology CDS 32117 33223 . - 0 ID=cds-MCY7217487.1;Parent=gene-MK542_04800;Dbxref=NCBI_GP:MCY7217487.1;Name=MCY7217487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591754.1;locus_tag=MK542_04800;product=sensor histidine kinase;protein_id=MCY7217487.1;transl_table=11 JAKUZA010000030.1 Genbank gene 33228 33962 . - . ID=gene-MK542_04805;Name=MK542_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04805 JAKUZA010000030.1 Protein Homology CDS 33228 33962 . - 0 ID=cds-MCY7217488.1;Parent=gene-MK542_04805;Dbxref=NCBI_GP:MCY7217488.1;Name=MCY7217488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660063.1;locus_tag=MK542_04805;product=ABC transporter permease;protein_id=MCY7217488.1;transl_table=11 JAKUZA010000030.1 Genbank gene 33975 34850 . - . ID=gene-MK542_04810;Name=MK542_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04810 JAKUZA010000030.1 Protein Homology CDS 33975 34850 . - 0 ID=cds-MCY7217489.1;Parent=gene-MK542_04810;Dbxref=NCBI_GP:MCY7217489.1;Name=MCY7217489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913966.1;locus_tag=MK542_04810;product=ABC transporter ATP-binding protein;protein_id=MCY7217489.1;transl_table=11 JAKUZA010000030.1 Genbank gene 34837 35031 . - . ID=gene-MK542_04815;Name=MK542_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04815 JAKUZA010000030.1 Protein Homology CDS 34837 35031 . - 0 ID=cds-MCY7217490.1;Parent=gene-MK542_04815;Dbxref=NCBI_GP:MCY7217490.1;Name=MCY7217490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605718.1;locus_tag=MK542_04815;product=hypothetical protein;protein_id=MCY7217490.1;transl_table=11 JAKUZA010000030.1 Genbank gene 35028 35210 . - . ID=gene-MK542_04820;Name=MK542_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04820 JAKUZA010000030.1 Protein Homology CDS 35028 35210 . - 0 ID=cds-MCY7217491.1;Parent=gene-MK542_04820;Dbxref=NCBI_GP:MCY7217491.1;Name=MCY7217491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605719.1;locus_tag=MK542_04820;product=hypothetical protein;protein_id=MCY7217491.1;transl_table=11 JAKUZA010000030.1 Genbank gene 35359 35910 . - . ID=gene-MK542_04825;Name=MK542_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04825 JAKUZA010000030.1 Protein Homology CDS 35359 35910 . - 0 ID=cds-MCY7217492.1;Parent=gene-MK542_04825;Dbxref=NCBI_GP:MCY7217492.1;Name=MCY7217492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605720.1;locus_tag=MK542_04825;product=hypothetical protein;protein_id=MCY7217492.1;transl_table=11 JAKUZA010000030.1 Genbank gene 36015 37679 . - . ID=gene-MK542_04830;Name=MK542_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04830 JAKUZA010000030.1 Protein Homology CDS 36015 37679 . - 0 ID=cds-MCY7217493.1;Parent=gene-MK542_04830;Dbxref=NCBI_GP:MCY7217493.1;Name=MCY7217493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193336.1;locus_tag=MK542_04830;product=DAK2 domain-containing protein;protein_id=MCY7217493.1;transl_table=11 JAKUZA010000030.1 Genbank gene 37682 38047 . - . ID=gene-MK542_04835;Name=MK542_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04835 JAKUZA010000030.1 Protein Homology CDS 37682 38047 . - 0 ID=cds-MCY7217494.1;Parent=gene-MK542_04835;Dbxref=NCBI_GP:MCY7217494.1;Name=MCY7217494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=MK542_04835;product=Asp23/Gls24 family envelope stress response protein;protein_id=MCY7217494.1;transl_table=11 JAKUZA010000030.1 Genbank gene 38195 38383 . - . ID=gene-MK542_04840;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=MK542_04840 JAKUZA010000030.1 Protein Homology CDS 38195 38383 . - 0 ID=cds-MCY7217495.1;Parent=gene-MK542_04840;Dbxref=NCBI_GP:MCY7217495.1;Name=MCY7217495.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=MK542_04840;product=50S ribosomal protein L28;protein_id=MCY7217495.1;transl_table=11 JAKUZA010000030.1 Genbank gene 38516 39181 . - . ID=gene-MK542_04845;Name=MK542_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04845 JAKUZA010000030.1 Protein Homology CDS 38516 39181 . - 0 ID=cds-MCY7217496.1;Parent=gene-MK542_04845;Dbxref=NCBI_GP:MCY7217496.1;Name=MCY7217496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902398.1;locus_tag=MK542_04845;product=hypothetical protein;protein_id=MCY7217496.1;transl_table=11 JAKUZA010000030.1 Genbank gene 39187 39633 . - . ID=gene-MK542_04850;Name=MK542_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04850 JAKUZA010000030.1 Protein Homology CDS 39187 39633 . - 0 ID=cds-MCY7217497.1;Parent=gene-MK542_04850;Dbxref=NCBI_GP:MCY7217497.1;Name=MCY7217497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893678.1;locus_tag=MK542_04850;product=LytTR family transcriptional regulator;protein_id=MCY7217497.1;transl_table=11 JAKUZA010000030.1 Genbank gene 39810 39882 . - . ID=gene-MK542_04855;Name=MK542_04855;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_04855 JAKUZA010000030.1 tRNAscan-SE tRNA 39810 39882 . - . ID=rna-MK542_04855;Parent=gene-MK542_04855;anticodon=(pos:complement(39847..39849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04855;product=tRNA-Thr JAKUZA010000030.1 tRNAscan-SE exon 39810 39882 . - . ID=exon-MK542_04855-1;Parent=rna-MK542_04855;anticodon=(pos:complement(39847..39849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_04855;product=tRNA-Thr JAKUZA010000030.1 Genbank gene 39983 40768 . - . ID=gene-MK542_04860;Name=MK542_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04860 JAKUZA010000030.1 Protein Homology CDS 39983 40768 . - 0 ID=cds-MCY7217498.1;Parent=gene-MK542_04860;Dbxref=NCBI_GP:MCY7217498.1;Name=MCY7217498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010202.1;locus_tag=MK542_04860;product=ABC transporter permease;protein_id=MCY7217498.1;transl_table=11 JAKUZA010000030.1 Genbank gene 40770 41588 . - . ID=gene-MK542_04865;Name=MK542_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04865 JAKUZA010000030.1 Protein Homology CDS 40770 41588 . - 0 ID=cds-MCY7217499.1;Parent=gene-MK542_04865;Dbxref=NCBI_GP:MCY7217499.1;Name=MCY7217499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240175.1;locus_tag=MK542_04865;product=ABC-2 family transporter protein;protein_id=MCY7217499.1;transl_table=11 JAKUZA010000030.1 Genbank gene 41590 42582 . - . ID=gene-MK542_04870;Name=MK542_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04870 JAKUZA010000030.1 Protein Homology CDS 41590 42582 . - 0 ID=cds-MCY7217500.1;Parent=gene-MK542_04870;Dbxref=NCBI_GP:MCY7217500.1;Name=MCY7217500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371202.1;locus_tag=MK542_04870;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217500.1;transl_table=11 ##sequence-region JAKUZA010000031.1 1 71181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000031.1 Genbank region 1 71181 . + . ID=JAKUZA010000031.1:1..71181;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000031.1 Genbank gene 124 1476 . - . ID=gene-MK542_04875;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=MK542_04875 JAKUZA010000031.1 Protein Homology CDS 124 1476 . - 0 ID=cds-MCY7217501.1;Parent=gene-MK542_04875;Dbxref=NCBI_GP:MCY7217501.1;Name=MCY7217501.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517007.1;locus_tag=MK542_04875;product=phosphoglucosamine mutase;protein_id=MCY7217501.1;transl_table=11 JAKUZA010000031.1 Genbank gene 1506 2264 . - . ID=gene-MK542_04880;Name=MK542_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04880 JAKUZA010000031.1 Protein Homology CDS 1506 2264 . - 0 ID=cds-MCY7217502.1;Parent=gene-MK542_04880;Dbxref=NCBI_GP:MCY7217502.1;Name=MCY7217502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040225.1;locus_tag=MK542_04880;product=CdaR family protein;protein_id=MCY7217502.1;transl_table=11 JAKUZA010000031.1 Genbank gene 2251 3108 . - . ID=gene-MK542_04885;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=MK542_04885 JAKUZA010000031.1 Protein Homology CDS 2251 3108 . - 0 ID=cds-MCY7217503.1;Parent=gene-MK542_04885;Dbxref=NCBI_GP:MCY7217503.1;Name=MCY7217503.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466660.1;locus_tag=MK542_04885;product=diadenylate cyclase CdaA;protein_id=MCY7217503.1;transl_table=11 JAKUZA010000031.1 Genbank gene 3215 4558 . + . ID=gene-MK542_04890;Name=MK542_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04890 JAKUZA010000031.1 Protein Homology CDS 3215 4558 . + 0 ID=cds-MCY7217504.1;Parent=gene-MK542_04890;Dbxref=NCBI_GP:MCY7217504.1;Name=MCY7217504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836724.1;locus_tag=MK542_04890;product=Mur ligase family protein;protein_id=MCY7217504.1;transl_table=11 JAKUZA010000031.1 Genbank gene 4558 5343 . + . ID=gene-MK542_04895;Name=MK542_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04895 JAKUZA010000031.1 Protein Homology CDS 4558 5343 . + 0 ID=cds-MCY7217505.1;Parent=gene-MK542_04895;Dbxref=NCBI_GP:MCY7217505.1;Name=MCY7217505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076396.1;locus_tag=MK542_04895;product=type 1 glutamine amidotransferase;protein_id=MCY7217505.1;transl_table=11 JAKUZA010000031.1 Genbank gene 5361 5618 . + . ID=gene-MK542_04900;Name=MK542_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04900 JAKUZA010000031.1 Protein Homology CDS 5361 5618 . + 0 ID=cds-MCY7217506.1;Parent=gene-MK542_04900;Dbxref=NCBI_GP:MCY7217506.1;Name=MCY7217506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895980.1;locus_tag=MK542_04900;product=LapA family protein;protein_id=MCY7217506.1;transl_table=11 JAKUZA010000031.1 Genbank gene 5633 6832 . - . ID=gene-MK542_04905;Name=MK542_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04905 JAKUZA010000031.1 Protein Homology CDS 5633 6832 . - 0 ID=cds-MCY7217507.1;Parent=gene-MK542_04905;Dbxref=NCBI_GP:MCY7217507.1;Name=MCY7217507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904162.1;locus_tag=MK542_04905;product=MFS transporter;protein_id=MCY7217507.1;transl_table=11 JAKUZA010000031.1 Genbank gene 6893 7756 . - . ID=gene-MK542_04910;Name=MK542_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04910 JAKUZA010000031.1 Protein Homology CDS 6893 7756 . - 0 ID=cds-MCY7217508.1;Parent=gene-MK542_04910;Dbxref=NCBI_GP:MCY7217508.1;Name=MCY7217508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836722.1;locus_tag=MK542_04910;product=MutR family transcriptional regulator;protein_id=MCY7217508.1;transl_table=11 JAKUZA010000031.1 Genbank gene 8297 10192 . - . ID=gene-MK542_04915;Name=MK542_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04915 JAKUZA010000031.1 Protein Homology CDS 8297 10192 . - 0 ID=cds-MCY7217509.1;Parent=gene-MK542_04915;Dbxref=NCBI_GP:MCY7217509.1;Name=MCY7217509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584877.1;locus_tag=MK542_04915;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCY7217509.1;transl_table=11 JAKUZA010000031.1 Genbank gene 10418 11824 . - . ID=gene-MK542_04920;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=MK542_04920 JAKUZA010000031.1 Protein Homology CDS 10418 11824 . - 0 ID=cds-MCY7217510.1;Parent=gene-MK542_04920;Dbxref=NCBI_GP:MCY7217510.1;Name=MCY7217510.1;Ontology_term=GO:0006012,GO:0004565,GO:0009341;gbkey=CDS;gene=lacG;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905071.1;locus_tag=MK542_04920;product=6-phospho-beta-galactosidase;protein_id=MCY7217510.1;transl_table=11 JAKUZA010000031.1 Genbank gene 11908 13614 . - . ID=gene-MK542_04925;Name=MK542_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04925 JAKUZA010000031.1 Protein Homology CDS 11908 13614 . - 0 ID=cds-MCY7217511.1;Parent=gene-MK542_04925;Dbxref=NCBI_GP:MCY7217511.1;Name=MCY7217511.1;Ontology_term=GO:0009401,GO:0015155,GO:0019197;gbkey=CDS;go_component=phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263057.1;locus_tag=MK542_04925;product=lactose-specific PTS transporter subunit EIIC;protein_id=MCY7217511.1;transl_table=11 JAKUZA010000031.1 Genbank gene 13614 13931 . - . ID=gene-MK542_04930;Name=MK542_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04930 JAKUZA010000031.1 Protein Homology CDS 13614 13931 . - 0 ID=cds-MCY7217512.1;Parent=gene-MK542_04930;Dbxref=NCBI_GP:MCY7217512.1;Name=MCY7217512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730102.1;locus_tag=MK542_04930;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=MCY7217512.1;transl_table=11 JAKUZA010000031.1 Genbank gene 13981 14814 . - . ID=gene-MK542_04935;Name=MK542_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04935 JAKUZA010000031.1 Protein Homology CDS 13981 14814 . - 0 ID=cds-MCY7217513.1;Parent=gene-MK542_04935;Dbxref=NCBI_GP:MCY7217513.1;Name=MCY7217513.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130588.1;locus_tag=MK542_04935;product=PRD domain-containing protein;protein_id=MCY7217513.1;transl_table=11 JAKUZA010000031.1 Genbank gene 15022 16002 . - . ID=gene-MK542_04940;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=MK542_04940 JAKUZA010000031.1 Protein Homology CDS 15022 16002 . - 0 ID=cds-MCY7217514.1;Parent=gene-MK542_04940;Dbxref=NCBI_GP:MCY7217514.1;Name=MCY7217514.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193024.1;locus_tag=MK542_04940;product=tagatose-bisphosphate aldolase;protein_id=MCY7217514.1;transl_table=11 JAKUZA010000031.1 Genbank gene 16006 16935 . - . ID=gene-MK542_04945;Name=MK542_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04945 JAKUZA010000031.1 Protein Homology CDS 16006 16935 . - 0 ID=cds-MCY7217515.1;Parent=gene-MK542_04945;Dbxref=NCBI_GP:MCY7217515.1;Name=MCY7217515.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604270.1;locus_tag=MK542_04945;product=tagatose-6-phosphate kinase;protein_id=MCY7217515.1;transl_table=11 JAKUZA010000031.1 Genbank gene 16948 17463 . - . ID=gene-MK542_04950;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=MK542_04950 JAKUZA010000031.1 Protein Homology CDS 16948 17463 . - 0 ID=cds-MCY7217516.1;Parent=gene-MK542_04950;Dbxref=NCBI_GP:MCY7217516.1;Name=MCY7217516.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027025.1;locus_tag=MK542_04950;product=galactose-6-phosphate isomerase subunit LacB;protein_id=MCY7217516.1;transl_table=11 JAKUZA010000031.1 Genbank gene 17480 17905 . - . ID=gene-MK542_04955;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=MK542_04955 JAKUZA010000031.1 Protein Homology CDS 17480 17905 . - 0 ID=cds-MCY7217517.1;Parent=gene-MK542_04955;Dbxref=NCBI_GP:MCY7217517.1;Name=MCY7217517.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacA;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590669.1;locus_tag=MK542_04955;product=galactose-6-phosphate isomerase subunit LacA;protein_id=MCY7217517.1;transl_table=11 JAKUZA010000031.1 Genbank gene 18094 18849 . - . ID=gene-MK542_04960;Name=MK542_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04960 JAKUZA010000031.1 Protein Homology CDS 18094 18849 . - 0 ID=cds-MCY7217518.1;Parent=gene-MK542_04960;Dbxref=NCBI_GP:MCY7217518.1;Name=MCY7217518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262461.1;locus_tag=MK542_04960;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCY7217518.1;transl_table=11 JAKUZA010000031.1 Genbank gene 19010 19375 . - . ID=gene-MK542_04965;Name=MK542_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04965 JAKUZA010000031.1 Protein Homology CDS 19010 19375 . - 0 ID=cds-MCY7217519.1;Parent=gene-MK542_04965;Dbxref=NCBI_GP:MCY7217519.1;Name=MCY7217519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836720.1;locus_tag=MK542_04965;product=hypothetical protein;protein_id=MCY7217519.1;transl_table=11 JAKUZA010000031.1 Genbank gene 19380 20096 . - . ID=gene-MK542_04970;Name=MK542_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04970 JAKUZA010000031.1 Protein Homology CDS 19380 20096 . - 0 ID=cds-MCY7217520.1;Parent=gene-MK542_04970;Dbxref=NCBI_GP:MCY7217520.1;Name=MCY7217520.1;Ontology_term=GO:0031012;gbkey=CDS;go_component=extracellular matrix|0031012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929911.1;locus_tag=MK542_04970;product=matrixin family metalloprotease;protein_id=MCY7217520.1;transl_table=11 JAKUZA010000031.1 Genbank gene 20239 21096 . - . ID=gene-MK542_04975;Name=MK542_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04975 JAKUZA010000031.1 Protein Homology CDS 20239 21096 . - 0 ID=cds-MCY7217521.1;Parent=gene-MK542_04975;Dbxref=NCBI_GP:MCY7217521.1;Name=MCY7217521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912083.1;locus_tag=MK542_04975;product=DNA/RNA non-specific endonuclease;protein_id=MCY7217521.1;transl_table=11 JAKUZA010000031.1 Genbank gene 21171 21359 . - . ID=gene-MK542_04980;Name=MK542_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04980 JAKUZA010000031.1 Protein Homology CDS 21171 21359 . - 0 ID=cds-MCY7217522.1;Parent=gene-MK542_04980;Dbxref=NCBI_GP:MCY7217522.1;Name=MCY7217522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028073.1;locus_tag=MK542_04980;product=DNA-directed RNA polymerase subunit beta;protein_id=MCY7217522.1;transl_table=11 JAKUZA010000031.1 Genbank gene 21352 22632 . - . ID=gene-MK542_04985;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=MK542_04985 JAKUZA010000031.1 Protein Homology CDS 21352 22632 . - 0 ID=cds-MCY7217523.1;Parent=gene-MK542_04985;Dbxref=NCBI_GP:MCY7217523.1;Name=MCY7217523.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915576.1;locus_tag=MK542_04985;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MCY7217523.1;transl_table=11 JAKUZA010000031.1 Genbank gene 22701 22931 . - . ID=gene-MK542_04990;Name=MK542_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04990 JAKUZA010000031.1 Protein Homology CDS 22701 22931 . - 0 ID=cds-MCY7217524.1;Parent=gene-MK542_04990;Dbxref=NCBI_GP:MCY7217524.1;Name=MCY7217524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929908.1;locus_tag=MK542_04990;product=DUF1146 family protein;protein_id=MCY7217524.1;transl_table=11 JAKUZA010000031.1 Genbank gene 23024 23443 . - . ID=gene-MK542_04995;Name=MK542_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_04995 JAKUZA010000031.1 Protein Homology CDS 23024 23443 . - 0 ID=cds-MCY7217525.1;Parent=gene-MK542_04995;Dbxref=NCBI_GP:MCY7217525.1;Name=MCY7217525.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596621.1;locus_tag=MK542_04995;product=F0F1 ATP synthase subunit epsilon;protein_id=MCY7217525.1;transl_table=11 JAKUZA010000031.1 Genbank gene 23454 24860 . - . ID=gene-MK542_05000;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=MK542_05000 JAKUZA010000031.1 Protein Homology CDS 23454 24860 . - 0 ID=cds-MCY7217526.1;Parent=gene-MK542_05000;Dbxref=NCBI_GP:MCY7217526.1;Name=MCY7217526.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=MK542_05000;product=F0F1 ATP synthase subunit beta;protein_id=MCY7217526.1;transl_table=11 JAKUZA010000031.1 Genbank gene 24898 25776 . - . ID=gene-MK542_05005;Name=MK542_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05005 JAKUZA010000031.1 Protein Homology CDS 24898 25776 . - 0 ID=cds-MCY7217527.1;Parent=gene-MK542_05005;Dbxref=NCBI_GP:MCY7217527.1;Name=MCY7217527.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895995.1;locus_tag=MK542_05005;product=F0F1 ATP synthase subunit gamma;protein_id=MCY7217527.1;transl_table=11 JAKUZA010000031.1 Genbank gene 25792 27297 . - . ID=gene-MK542_05010;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=MK542_05010 JAKUZA010000031.1 Protein Homology CDS 25792 27297 . - 0 ID=cds-MCY7217528.1;Parent=gene-MK542_05010;Dbxref=NCBI_GP:MCY7217528.1;Name=MCY7217528.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889023.1;locus_tag=MK542_05010;product=F0F1 ATP synthase subunit alpha;protein_id=MCY7217528.1;transl_table=11 JAKUZA010000031.1 Genbank gene 27313 27849 . - . ID=gene-MK542_05015;Name=MK542_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05015 JAKUZA010000031.1 Protein Homology CDS 27313 27849 . - 0 ID=cds-MCY7217529.1;Parent=gene-MK542_05015;Dbxref=NCBI_GP:MCY7217529.1;Name=MCY7217529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836717.1;locus_tag=MK542_05015;product=F0F1 ATP synthase subunit delta;protein_id=MCY7217529.1;transl_table=11 JAKUZA010000031.1 Genbank gene 27849 28343 . - . ID=gene-MK542_05020;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=MK542_05020 JAKUZA010000031.1 Protein Homology CDS 27849 28343 . - 0 ID=cds-MCY7217530.1;Parent=gene-MK542_05020;Dbxref=NCBI_GP:MCY7217530.1;Name=MCY7217530.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659995.1;locus_tag=MK542_05020;product=F0F1 ATP synthase subunit B;protein_id=MCY7217530.1;transl_table=11 JAKUZA010000031.1 Genbank gene 28366 29079 . - . ID=gene-MK542_05025;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=MK542_05025 JAKUZA010000031.1 Protein Homology CDS 28366 29079 . - 0 ID=cds-MCY7217531.1;Parent=gene-MK542_05025;Dbxref=NCBI_GP:MCY7217531.1;Name=MCY7217531.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371919.1;locus_tag=MK542_05025;product=F0F1 ATP synthase subunit A;protein_id=MCY7217531.1;transl_table=11 JAKUZA010000031.1 Genbank gene 29113 29313 . - . ID=gene-MK542_05030;Name=MK542_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05030 JAKUZA010000031.1 Protein Homology CDS 29113 29313 . - 0 ID=cds-MCY7217532.1;Parent=gene-MK542_05030;Dbxref=NCBI_GP:MCY7217532.1;Name=MCY7217532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545704.1;locus_tag=MK542_05030;product=F0F1 ATP synthase subunit C;protein_id=MCY7217532.1;transl_table=11 JAKUZA010000031.1 Genbank gene 29924 31300 . - . ID=gene-MK542_05035;Name=MK542_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05035 JAKUZA010000031.1 Protein Homology CDS 29924 31300 . - 0 ID=cds-MCY7217533.1;Parent=gene-MK542_05035;Dbxref=NCBI_GP:MCY7217533.1;Name=MCY7217533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930078.1;locus_tag=MK542_05035;product=HAMP domain-containing histidine kinase;protein_id=MCY7217533.1;transl_table=11 JAKUZA010000031.1 Genbank gene 31297 31953 . - . ID=gene-MK542_05040;Name=MK542_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05040 JAKUZA010000031.1 Protein Homology CDS 31297 31953 . - 0 ID=cds-MCY7217534.1;Parent=gene-MK542_05040;Dbxref=NCBI_GP:MCY7217534.1;Name=MCY7217534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895843.1;locus_tag=MK542_05040;product=response regulator transcription factor;protein_id=MCY7217534.1;transl_table=11 JAKUZA010000031.1 Genbank gene 31975 33192 . - . ID=gene-MK542_05045;Name=MK542_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05045 JAKUZA010000031.1 Protein Homology CDS 31975 33192 . - 0 ID=cds-MCY7217535.1;Parent=gene-MK542_05045;Dbxref=NCBI_GP:MCY7217535.1;Name=MCY7217535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895844.1;locus_tag=MK542_05045;product=ABC transporter permease;protein_id=MCY7217535.1;transl_table=11 JAKUZA010000031.1 Genbank gene 33204 33878 . - . ID=gene-MK542_05050;Name=MK542_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05050 JAKUZA010000031.1 Protein Homology CDS 33204 33878 . - 0 ID=cds-MCY7217536.1;Parent=gene-MK542_05050;Dbxref=NCBI_GP:MCY7217536.1;Name=MCY7217536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912187.1;locus_tag=MK542_05050;product=ABC transporter ATP-binding protein;protein_id=MCY7217536.1;transl_table=11 JAKUZA010000031.1 Genbank gene 33865 35130 . - . ID=gene-MK542_05055;Name=MK542_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05055 JAKUZA010000031.1 Protein Homology CDS 33865 35130 . - 0 ID=cds-MCY7217537.1;Parent=gene-MK542_05055;Dbxref=NCBI_GP:MCY7217537.1;Name=MCY7217537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900622.1;locus_tag=MK542_05055;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MCY7217537.1;transl_table=11 JAKUZA010000031.1 Genbank gene 35159 35425 . - . ID=gene-MK542_05060;Name=MK542_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05060 JAKUZA010000031.1 Protein Homology CDS 35159 35425 . - 0 ID=cds-MCY7217538.1;Parent=gene-MK542_05060;Dbxref=NCBI_GP:MCY7217538.1;Name=MCY7217538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604678.1;locus_tag=MK542_05060;product=hypothetical protein;protein_id=MCY7217538.1;transl_table=11 JAKUZA010000031.1 Genbank gene 35666 36676 . + . ID=gene-MK542_05065;Name=MK542_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05065 JAKUZA010000031.1 Protein Homology CDS 35666 36676 . + 0 ID=cds-MCY7217539.1;Parent=gene-MK542_05065;Dbxref=NCBI_GP:MCY7217539.1;Name=MCY7217539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187414.1;locus_tag=MK542_05065;product=lactonase family protein;protein_id=MCY7217539.1;transl_table=11 JAKUZA010000031.1 Genbank gene 36955 38145 . - . ID=gene-MK542_05070;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=MK542_05070 JAKUZA010000031.1 Protein Homology CDS 36955 38145 . - 0 ID=cds-MCY7217540.1;Parent=gene-MK542_05070;Dbxref=NCBI_GP:MCY7217540.1;Name=MCY7217540.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837180.1;locus_tag=MK542_05070;product=methionine adenosyltransferase;protein_id=MCY7217540.1;transl_table=11 JAKUZA010000031.1 Genbank gene 38488 39102 . - . ID=gene-MK542_05075;Name=MK542_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05075 JAKUZA010000031.1 Protein Homology CDS 38488 39102 . - 0 ID=cds-MCY7217541.1;Parent=gene-MK542_05075;Dbxref=NCBI_GP:MCY7217541.1;Name=MCY7217541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659261.1;locus_tag=MK542_05075;product=tetratricopeptide repeat protein;protein_id=MCY7217541.1;transl_table=11 JAKUZA010000031.1 Genbank gene 39136 39603 . - . ID=gene-MK542_05080;Name=MK542_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05080 JAKUZA010000031.1 Protein Homology CDS 39136 39603 . - 0 ID=cds-MCY7217542.1;Parent=gene-MK542_05080;Dbxref=NCBI_GP:MCY7217542.1;Name=MCY7217542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138511.1;locus_tag=MK542_05080;product=cytidine/deoxycytidylate deaminase family protein;protein_id=MCY7217542.1;transl_table=11 JAKUZA010000031.1 Genbank gene 39714 40073 . - . ID=gene-MK542_05085;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=MK542_05085 JAKUZA010000031.1 Protein Homology CDS 39714 40073 . - 0 ID=cds-MCY7217543.1;Parent=gene-MK542_05085;Dbxref=NCBI_GP:MCY7217543.1;Name=MCY7217543.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=MK542_05085;product=50S ribosomal protein L20;protein_id=MCY7217543.1;transl_table=11 JAKUZA010000031.1 Genbank gene 40119 40319 . - . ID=gene-MK542_05090;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=MK542_05090 JAKUZA010000031.1 Protein Homology CDS 40119 40319 . - 0 ID=cds-MCY7217544.1;Parent=gene-MK542_05090;Dbxref=NCBI_GP:MCY7217544.1;Name=MCY7217544.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895038.1;locus_tag=MK542_05090;product=50S ribosomal protein L35;protein_id=MCY7217544.1;transl_table=11 JAKUZA010000031.1 Genbank gene 40353 40883 . - . ID=gene-MK542_05095;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=MK542_05095 JAKUZA010000031.1 Protein Homology CDS 40353 40883 . - 0 ID=cds-MCY7217545.1;Parent=gene-MK542_05095;Dbxref=NCBI_GP:MCY7217545.1;Name=MCY7217545.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012515489.1;locus_tag=MK542_05095;product=translation initiation factor IF-3;protein_id=MCY7217545.1;transl_table=11 JAKUZA010000031.1 cmsearch sequence_feature 40900 41030 . - . ID=id-JAKUZA010000031.1:40900..41030;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAKUZA010000031.1 Genbank gene 41057 41734 . - . ID=gene-MK542_05100;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=MK542_05100 JAKUZA010000031.1 Protein Homology CDS 41057 41734 . - 0 ID=cds-MCY7217546.1;Parent=gene-MK542_05100;Dbxref=NCBI_GP:MCY7217546.1;Name=MCY7217546.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590592.1;locus_tag=MK542_05100;product=(d)CMP kinase;protein_id=MCY7217546.1;transl_table=11 JAKUZA010000031.1 Genbank gene 41744 42199 . - . ID=gene-MK542_05105;Name=MK542_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05105 JAKUZA010000031.1 Protein Homology CDS 41744 42199 . - 0 ID=cds-MCY7217547.1;Parent=gene-MK542_05105;Dbxref=NCBI_GP:MCY7217547.1;Name=MCY7217547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897255.1;locus_tag=MK542_05105;product=hypothetical protein;protein_id=MCY7217547.1;transl_table=11 JAKUZA010000031.1 Genbank gene 42239 42442 . + . ID=gene-MK542_05110;Name=MK542_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05110 JAKUZA010000031.1 Protein Homology CDS 42239 42442 . + 0 ID=cds-MCY7217548.1;Parent=gene-MK542_05110;Dbxref=NCBI_GP:MCY7217548.1;Name=MCY7217548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895033.1;locus_tag=MK542_05110;product=ferredoxin;protein_id=MCY7217548.1;transl_table=11 JAKUZA010000031.1 Genbank gene 42439 42927 . - . ID=gene-MK542_05115;Name=MK542_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05115 JAKUZA010000031.1 Protein Homology CDS 42439 42927 . - 0 ID=cds-MCY7217549.1;Parent=gene-MK542_05115;Dbxref=NCBI_GP:MCY7217549.1;Name=MCY7217549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895031.1;locus_tag=MK542_05115;product=EbsA family protein;protein_id=MCY7217549.1;transl_table=11 JAKUZA010000031.1 Genbank gene 42998 45466 . - . ID=gene-MK542_05120;Name=MK542_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05120 JAKUZA010000031.1 Protein Homology CDS 42998 45466 . - 0 ID=cds-MCY7217550.1;Parent=gene-MK542_05120;Dbxref=NCBI_GP:MCY7217550.1;Name=MCY7217550.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068663.1;locus_tag=MK542_05120;product=sulfatase-like hydrolase/transferase;protein_id=MCY7217550.1;transl_table=11 JAKUZA010000031.1 Genbank gene 45491 47137 . - . ID=gene-MK542_05125;Name=MK542_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05125 JAKUZA010000031.1 Protein Homology CDS 45491 47137 . - 0 ID=cds-MCY7217551.1;Parent=gene-MK542_05125;Dbxref=NCBI_GP:MCY7217551.1;Name=MCY7217551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604482.1;locus_tag=MK542_05125;product=rhamnan synthesis F family protein;protein_id=MCY7217551.1;transl_table=11 JAKUZA010000031.1 Genbank gene 47155 48363 . - . ID=gene-MK542_05130;Name=MK542_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05130 JAKUZA010000031.1 Protein Homology CDS 47155 48363 . - 0 ID=cds-MCY7217552.1;Parent=gene-MK542_05130;Dbxref=NCBI_GP:MCY7217552.1;Name=MCY7217552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270670.1;locus_tag=MK542_05130;product=ABC transporter ATP-binding protein;protein_id=MCY7217552.1;transl_table=11 JAKUZA010000031.1 Genbank gene 48363 49172 . - . ID=gene-MK542_05135;Name=MK542_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05135 JAKUZA010000031.1 Protein Homology CDS 48363 49172 . - 0 ID=cds-MCY7217553.1;Parent=gene-MK542_05135;Dbxref=NCBI_GP:MCY7217553.1;Name=MCY7217553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535187.1;locus_tag=MK542_05135;product=ABC transporter permease;protein_id=MCY7217553.1;transl_table=11 JAKUZA010000031.1 Genbank gene 49178 50113 . - . ID=gene-MK542_05140;Name=MK542_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05140 JAKUZA010000031.1 Protein Homology CDS 49178 50113 . - 0 ID=cds-MCY7217554.1;Parent=gene-MK542_05140;Dbxref=NCBI_GP:MCY7217554.1;Name=MCY7217554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933134.1;locus_tag=MK542_05140;product=glycosyltransferase family 2 protein;protein_id=MCY7217554.1;transl_table=11 JAKUZA010000031.1 Genbank gene 50110 51258 . - . ID=gene-MK542_05145;Name=MK542_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05145 JAKUZA010000031.1 Protein Homology CDS 50110 51258 . - 0 ID=cds-MCY7217555.1;Parent=gene-MK542_05145;Dbxref=NCBI_GP:MCY7217555.1;Name=MCY7217555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933131.1;locus_tag=MK542_05145;product=glycosyltransferase family 1 protein;protein_id=MCY7217555.1;transl_table=11 JAKUZA010000031.1 Genbank gene 51430 52674 . - . ID=gene-MK542_05150;Name=MK542_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05150 JAKUZA010000031.1 Protein Homology CDS 51430 52674 . - 0 ID=cds-MCY7217556.1;Parent=gene-MK542_05150;Dbxref=NCBI_GP:MCY7217556.1;Name=MCY7217556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010771309.1;locus_tag=MK542_05150;product=glycosyltransferase family 4 protein;protein_id=MCY7217556.1;transl_table=11 JAKUZA010000031.1 Genbank gene 52684 53985 . - . ID=gene-MK542_05155;Name=MK542_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05155 JAKUZA010000031.1 Protein Homology CDS 52684 53985 . - 0 ID=cds-MCY7217557.1;Parent=gene-MK542_05155;Dbxref=NCBI_GP:MCY7217557.1;Name=MCY7217557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604477.1;locus_tag=MK542_05155;product=DUF2142 domain-containing protein;protein_id=MCY7217557.1;transl_table=11 JAKUZA010000031.1 Genbank gene 53972 56905 . - . ID=gene-MK542_05160;Name=MK542_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05160 JAKUZA010000031.1 Protein Homology CDS 53972 56905 . - 0 ID=cds-MCY7217558.1;Parent=gene-MK542_05160;Dbxref=NCBI_GP:MCY7217558.1;Name=MCY7217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895013.1;locus_tag=MK542_05160;product=glycosyltransferase;protein_id=MCY7217558.1;transl_table=11 JAKUZA010000031.1 Genbank gene 56930 57709 . - . ID=gene-MK542_05165;Name=MK542_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05165 JAKUZA010000031.1 Protein Homology CDS 56930 57709 . - 0 ID=cds-MCY7217559.1;Parent=gene-MK542_05165;Dbxref=NCBI_GP:MCY7217559.1;Name=MCY7217559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897244.1;locus_tag=MK542_05165;product=glycosyltransferase family 2 protein;protein_id=MCY7217559.1;transl_table=11 JAKUZA010000031.1 Genbank gene 57699 58058 . - . ID=gene-MK542_05170;Name=MK542_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05170 JAKUZA010000031.1 Protein Homology CDS 57699 58058 . - 0 ID=cds-MCY7217560.1;Parent=gene-MK542_05170;Dbxref=NCBI_GP:MCY7217560.1;Name=MCY7217560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897243.1;locus_tag=MK542_05170;product=DUF2304 domain-containing protein;protein_id=MCY7217560.1;transl_table=11 JAKUZA010000031.1 Genbank gene 58058 58774 . - . ID=gene-MK542_05175;Name=MK542_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05175 JAKUZA010000031.1 Protein Homology CDS 58058 58774 . - 0 ID=cds-MCY7217561.1;Parent=gene-MK542_05175;Dbxref=NCBI_GP:MCY7217561.1;Name=MCY7217561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604473.1;locus_tag=MK542_05175;product=glycosyltransferase family 2 protein;protein_id=MCY7217561.1;transl_table=11 JAKUZA010000031.1 Genbank gene 58771 59742 . - . ID=gene-MK542_05180;Name=MK542_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05180 JAKUZA010000031.1 Protein Homology CDS 58771 59742 . - 0 ID=cds-MCY7217562.1;Parent=gene-MK542_05180;Dbxref=NCBI_GP:MCY7217562.1;Name=MCY7217562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604472.1;locus_tag=MK542_05180;product=glycosyltransferase;protein_id=MCY7217562.1;transl_table=11 JAKUZA010000031.1 Genbank gene 59769 60716 . - . ID=gene-MK542_05185;Name=MK542_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05185 JAKUZA010000031.1 Protein Homology CDS 59769 60716 . - 0 ID=cds-MCY7217563.1;Parent=gene-MK542_05185;Dbxref=NCBI_GP:MCY7217563.1;Name=MCY7217563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270721.1;locus_tag=MK542_05185;product=glycosyltransferase family 2 protein;protein_id=MCY7217563.1;transl_table=11 JAKUZA010000031.1 Genbank gene 60724 61998 . - . ID=gene-MK542_05190;Name=MK542_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05190 JAKUZA010000031.1 Protein Homology CDS 60724 61998 . - 0 ID=cds-MCY7217564.1;Parent=gene-MK542_05190;Dbxref=NCBI_GP:MCY7217564.1;Name=MCY7217564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904933.1;locus_tag=MK542_05190;product=lipopolysaccharide biosynthesis protein;protein_id=MCY7217564.1;transl_table=11 JAKUZA010000031.1 Genbank gene 62070 62924 . - . ID=gene-MK542_05195;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=MK542_05195 JAKUZA010000031.1 Protein Homology CDS 62070 62924 . - 0 ID=cds-MCY7217565.1;Parent=gene-MK542_05195;Dbxref=NCBI_GP:MCY7217565.1;Name=MCY7217565.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836759.1;locus_tag=MK542_05195;product=dTDP-4-dehydrorhamnose reductase;protein_id=MCY7217565.1;transl_table=11 JAKUZA010000031.1 Genbank gene 63048 64256 . - . ID=gene-MK542_05200;Name=MK542_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05200 JAKUZA010000031.1 Protein Homology CDS 63048 64256 . - 0 ID=cds-MCY7217566.1;Parent=gene-MK542_05200;Dbxref=NCBI_GP:MCY7217566.1;Name=MCY7217566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604468.1;locus_tag=MK542_05200;product=beta-carotene 15%2C15'-monooxygenase;protein_id=MCY7217566.1;transl_table=11 JAKUZA010000031.1 Genbank gene 64311 65237 . - . ID=gene-MK542_05205;Name=MK542_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05205 JAKUZA010000031.1 Protein Homology CDS 64311 65237 . - 0 ID=cds-MCY7217567.1;Parent=gene-MK542_05205;Dbxref=NCBI_GP:MCY7217567.1;Name=MCY7217567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836757.1;locus_tag=MK542_05205;product=glycosyltransferase family 2 protein;protein_id=MCY7217567.1;transl_table=11 JAKUZA010000031.1 Genbank gene 65336 66616 . - . ID=gene-MK542_05210;Name=MK542_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05210 JAKUZA010000031.1 Protein Homology CDS 65336 66616 . - 0 ID=cds-MCY7217568.1;Parent=gene-MK542_05210;Dbxref=NCBI_GP:MCY7217568.1;Name=MCY7217568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604466.1;locus_tag=MK542_05210;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=MCY7217568.1;transl_table=11 JAKUZA010000031.1 Genbank gene 66715 67113 . - . ID=gene-MK542_05215;Name=MK542_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05215 JAKUZA010000031.1 Protein Homology CDS 66715 67113 . - 0 ID=cds-MCY7217569.1;Parent=gene-MK542_05215;Dbxref=NCBI_GP:MCY7217569.1;Name=MCY7217569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836755.1;locus_tag=MK542_05215;product=NUDIX domain-containing protein;protein_id=MCY7217569.1;transl_table=11 JAKUZA010000031.1 Genbank gene 67110 69398 . - . ID=gene-MK542_05220;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=MK542_05220 JAKUZA010000031.1 Protein Homology CDS 67110 69398 . - 0 ID=cds-MCY7217570.1;Parent=gene-MK542_05220;Dbxref=NCBI_GP:MCY7217570.1;Name=MCY7217570.1;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895912.1;locus_tag=MK542_05220;product=DNA helicase PcrA;protein_id=MCY7217570.1;transl_table=11 JAKUZA010000031.1 Genbank gene 69546 70736 . + . ID=gene-MK542_05225;Name=MK542_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05225 JAKUZA010000031.1 Protein Homology CDS 69546 70736 . + 0 ID=cds-MCY7217571.1;Parent=gene-MK542_05225;Dbxref=NCBI_GP:MCY7217571.1;Name=MCY7217571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590621.1;locus_tag=MK542_05225;product=cation diffusion facilitator family transporter;protein_id=MCY7217571.1;transl_table=11 JAKUZA010000031.1 Genbank gene 70744 70866 . - . ID=gene-MK542_05230;Name=MK542_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05230 JAKUZA010000031.1 Protein Homology CDS 70744 70866 . - 0 ID=cds-MCY7217572.1;Parent=gene-MK542_05230;Dbxref=NCBI_GP:MCY7217572.1;Name=MCY7217572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=MK542_05230;product=hypothetical protein;protein_id=MCY7217572.1;transl_table=11 ##sequence-region JAKUZA010000032.1 1 103878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000032.1 Genbank region 1 103878 . + . ID=JAKUZA010000032.1:1..103878;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000032.1 Genbank gene 10 576 . - . ID=gene-MK542_05235;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=MK542_05235 JAKUZA010000032.1 Protein Homology CDS 10 576 . - 0 ID=cds-MCY7217573.1;Parent=gene-MK542_05235;Dbxref=NCBI_GP:MCY7217573.1;Name=MCY7217573.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900661.1;locus_tag=MK542_05235;product=signal peptidase I;protein_id=MCY7217573.1;transl_table=11 JAKUZA010000032.1 Genbank gene 731 2680 . - . ID=gene-MK542_05240;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=MK542_05240 JAKUZA010000032.1 Protein Homology CDS 731 2680 . - 0 ID=cds-MCY7217574.1;Parent=gene-MK542_05240;Dbxref=NCBI_GP:MCY7217574.1;Name=MCY7217574.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605389.1;locus_tag=MK542_05240;product=threonine--tRNA ligase;protein_id=MCY7217574.1;transl_table=11 JAKUZA010000032.1 Genbank gene 2677 3318 . - . ID=gene-MK542_05245;Name=MK542_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05245 JAKUZA010000032.1 Protein Homology CDS 2677 3318 . - 0 ID=cds-MCY7217575.1;Parent=gene-MK542_05245;Dbxref=NCBI_GP:MCY7217575.1;Name=MCY7217575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192890.1;locus_tag=MK542_05245;product=AAA family ATPase;protein_id=MCY7217575.1;transl_table=11 JAKUZA010000032.1 Genbank gene 3585 3950 . - . ID=gene-MK542_05250;Name=MK542_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05250 JAKUZA010000032.1 Protein Homology CDS 3585 3950 . - 0 ID=cds-MCY7217576.1;Parent=gene-MK542_05250;Dbxref=NCBI_GP:MCY7217576.1;Name=MCY7217576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605391.1;locus_tag=MK542_05250;product=hypothetical protein;protein_id=MCY7217576.1;transl_table=11 JAKUZA010000032.1 Genbank gene 3987 5300 . - . ID=gene-MK542_05255;Name=MK542_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05255 JAKUZA010000032.1 Protein Homology CDS 3987 5300 . - 0 ID=cds-MCY7217577.1;Parent=gene-MK542_05255;Dbxref=NCBI_GP:MCY7217577.1;Name=MCY7217577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934263.1;locus_tag=MK542_05255;product=glycosyltransferase family 4 protein;protein_id=MCY7217577.1;transl_table=11 JAKUZA010000032.1 Genbank gene 5302 6300 . - . ID=gene-MK542_05260;Name=MK542_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05260 JAKUZA010000032.1 Protein Homology CDS 5302 6300 . - 0 ID=cds-MCY7217578.1;Parent=gene-MK542_05260;Dbxref=NCBI_GP:MCY7217578.1;Name=MCY7217578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192896.1;locus_tag=MK542_05260;product=glycosyltransferase;protein_id=MCY7217578.1;transl_table=11 JAKUZA010000032.1 Genbank gene 6583 7587 . - . ID=gene-MK542_05265;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=MK542_05265 JAKUZA010000032.1 Protein Homology CDS 6583 7587 . - 0 ID=cds-MCY7217579.1;Parent=gene-MK542_05265;Dbxref=NCBI_GP:MCY7217579.1;Name=MCY7217579.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000235.1;locus_tag=MK542_05265;product=catabolite control protein A;protein_id=MCY7217579.1;transl_table=11 JAKUZA010000032.1 Genbank gene 7749 8831 . + . ID=gene-MK542_05270;Name=MK542_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05270 JAKUZA010000032.1 Protein Homology CDS 7749 8831 . + 0 ID=cds-MCY7217580.1;Parent=gene-MK542_05270;Dbxref=NCBI_GP:MCY7217580.1;Name=MCY7217580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040939.1;locus_tag=MK542_05270;product=Xaa-Pro peptidase family protein;protein_id=MCY7217580.1;transl_table=11 JAKUZA010000032.1 Genbank pseudogene 9336 9578 . - . ID=gene-MK542_05275;Name=MK542_05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05275;pseudo=true JAKUZA010000032.1 Protein Homology CDS 9336 9578 . - 0 ID=cds-MK542_05275;Parent=gene-MK542_05275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264080.1;locus_tag=MK542_05275;product=DUF3387 domain-containing protein;pseudo=true;transl_table=11 JAKUZA010000032.1 Genbank gene 9796 10293 . - . ID=gene-MK542_05280;Name=MK542_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05280 JAKUZA010000032.1 Protein Homology CDS 9796 10293 . - 0 ID=cds-MCY7217581.1;Parent=gene-MK542_05280;Dbxref=NCBI_GP:MCY7217581.1;Name=MCY7217581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009013986.1;locus_tag=MK542_05280;product=hypothetical protein;protein_id=MCY7217581.1;transl_table=11 JAKUZA010000032.1 Genbank gene 10577 11029 . - . ID=gene-MK542_05285;Name=MK542_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05285 JAKUZA010000032.1 Protein Homology CDS 10577 11029 . - 0 ID=cds-MCY7217582.1;Parent=gene-MK542_05285;Dbxref=NCBI_GP:MCY7217582.1;Name=MCY7217582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931101.1;locus_tag=MK542_05285;product=Rrf2 family transcriptional regulator;protein_id=MCY7217582.1;transl_table=11 JAKUZA010000032.1 Genbank gene 11373 12707 . + . ID=gene-MK542_05290;Name=MK542_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05290 JAKUZA010000032.1 Protein Homology CDS 11373 12707 . + 0 ID=cds-MCY7217583.1;Parent=gene-MK542_05290;Dbxref=NCBI_GP:MCY7217583.1;Name=MCY7217583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025370.1;locus_tag=MK542_05290;product=SPFH domain-containing protein;protein_id=MCY7217583.1;transl_table=11 JAKUZA010000032.1 Genbank gene 12757 13842 . + . ID=gene-MK542_05295;Name=MK542_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05295 JAKUZA010000032.1 Protein Homology CDS 12757 13842 . + 0 ID=cds-MCY7217584.1;Parent=gene-MK542_05295;Dbxref=NCBI_GP:MCY7217584.1;Name=MCY7217584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270133.1;locus_tag=MK542_05295;product=hypothetical protein;protein_id=MCY7217584.1;transl_table=11 JAKUZA010000032.1 Genbank gene 13859 15040 . + . ID=gene-MK542_05300;Name=MK542_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05300 JAKUZA010000032.1 Protein Homology CDS 13859 15040 . + 0 ID=cds-MCY7217585.1;Parent=gene-MK542_05300;Dbxref=NCBI_GP:MCY7217585.1;Name=MCY7217585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270171.1;locus_tag=MK542_05300;product=TPM domain-containing protein;protein_id=MCY7217585.1;transl_table=11 JAKUZA010000032.1 Genbank gene 15131 15973 . - . ID=gene-MK542_05305;Name=MK542_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05305 JAKUZA010000032.1 Protein Homology CDS 15131 15973 . - 0 ID=cds-MCY7217586.1;Parent=gene-MK542_05305;Dbxref=NCBI_GP:MCY7217586.1;Name=MCY7217586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068483.1;locus_tag=MK542_05305;product=metallophosphoesterase family protein;protein_id=MCY7217586.1;transl_table=11 JAKUZA010000032.1 Genbank gene 16077 19442 . - . ID=gene-MK542_05310;Name=MK542_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05310 JAKUZA010000032.1 Protein Homology CDS 16077 19442 . - 0 ID=cds-MCY7217587.1;Parent=gene-MK542_05310;Dbxref=NCBI_GP:MCY7217587.1;Name=MCY7217587.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269694.1;locus_tag=MK542_05310;product=FtsX-like permease family protein;protein_id=MCY7217587.1;transl_table=11 JAKUZA010000032.1 Genbank gene 19455 20156 . - . ID=gene-MK542_05315;Name=MK542_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05315 JAKUZA010000032.1 Protein Homology CDS 19455 20156 . - 0 ID=cds-MCY7217588.1;Parent=gene-MK542_05315;Dbxref=NCBI_GP:MCY7217588.1;Name=MCY7217588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000195.1;locus_tag=MK542_05315;product=ABC transporter ATP-binding protein;protein_id=MCY7217588.1;transl_table=11 JAKUZA010000032.1 Genbank gene 20306 20860 . + . ID=gene-MK542_05320;Name=MK542_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05320 JAKUZA010000032.1 Protein Homology CDS 20306 20860 . + 0 ID=cds-MCY7217589.1;Parent=gene-MK542_05320;Dbxref=NCBI_GP:MCY7217589.1;Name=MCY7217589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897177.1;locus_tag=MK542_05320;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7217589.1;transl_table=11 JAKUZA010000032.1 Genbank gene 20989 23043 . - . ID=gene-MK542_05325;Name=MK542_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05325 JAKUZA010000032.1 Protein Homology CDS 20989 23043 . - 0 ID=cds-MCY7217590.1;Parent=gene-MK542_05325;Dbxref=NCBI_GP:MCY7217590.1;Name=MCY7217590.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269640.1;locus_tag=MK542_05325;product=C69 family dipeptidase;protein_id=MCY7217590.1;transl_table=11 JAKUZA010000032.1 Genbank gene 23239 24951 . - . ID=gene-MK542_05330;Name=MK542_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05330 JAKUZA010000032.1 Protein Homology CDS 23239 24951 . - 0 ID=cds-MCY7217591.1;Parent=gene-MK542_05330;Dbxref=NCBI_GP:MCY7217591.1;Name=MCY7217591.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605436.1;locus_tag=MK542_05330;product=C69 family dipeptidase;protein_id=MCY7217591.1;transl_table=11 JAKUZA010000032.1 Genbank gene 25524 25991 . - . ID=gene-MK542_05335;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=MK542_05335 JAKUZA010000032.1 Protein Homology CDS 25524 25991 . - 0 ID=cds-MCY7217592.1;Parent=gene-MK542_05335;Dbxref=NCBI_GP:MCY7217592.1;Name=MCY7217592.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894882.1;locus_tag=MK542_05335;product=SsrA-binding protein SmpB;protein_id=MCY7217592.1;transl_table=11 JAKUZA010000032.1 Genbank gene 25954 28302 . - . ID=gene-MK542_05340;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=MK542_05340 JAKUZA010000032.1 Protein Homology CDS 25954 28302 . - 0 ID=cds-MCY7217593.1;Parent=gene-MK542_05340;Dbxref=NCBI_GP:MCY7217593.1;Name=MCY7217593.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918654.1;locus_tag=MK542_05340;product=ribonuclease R;protein_id=MCY7217593.1;transl_table=11 JAKUZA010000032.1 Genbank gene 28392 28625 . - . ID=gene-MK542_05345;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=MK542_05345 JAKUZA010000032.1 Protein Homology CDS 28392 28625 . - 0 ID=cds-MCY7217594.1;Parent=gene-MK542_05345;Dbxref=NCBI_GP:MCY7217594.1;Name=MCY7217594.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000186.1;locus_tag=MK542_05345;product=preprotein translocase subunit SecG;protein_id=MCY7217594.1;transl_table=11 JAKUZA010000032.1 Genbank gene 28667 28816 . - . ID=gene-MK542_05350;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=MK542_05350 JAKUZA010000032.1 Protein Homology CDS 28667 28816 . - 0 ID=cds-MCY7217595.1;Parent=gene-MK542_05350;Dbxref=NCBI_GP:MCY7217595.1;Name=MCY7217595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809064.1;locus_tag=MK542_05350;product=50S ribosomal protein L33;protein_id=MCY7217595.1;transl_table=11 JAKUZA010000032.1 Genbank gene 28816 29925 . - . ID=gene-MK542_05355;Name=MK542_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05355 JAKUZA010000032.1 Protein Homology CDS 28816 29925 . - 0 ID=cds-MCY7217596.1;Parent=gene-MK542_05355;Dbxref=NCBI_GP:MCY7217596.1;Name=MCY7217596.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909257.1;locus_tag=MK542_05355;product=MFS transporter;protein_id=MCY7217596.1;transl_table=11 JAKUZA010000032.1 Genbank gene 30023 30616 . - . ID=gene-MK542_05360;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=MK542_05360 JAKUZA010000032.1 Protein Homology CDS 30023 30616 . - 0 ID=cds-MCY7217597.1;Parent=gene-MK542_05360;Dbxref=NCBI_GP:MCY7217597.1;Name=MCY7217597.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192933.1;locus_tag=MK542_05360;product=dephospho-CoA kinase;protein_id=MCY7217597.1;transl_table=11 JAKUZA010000032.1 Genbank gene 30622 31446 . - . ID=gene-MK542_05365;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=MK542_05365 JAKUZA010000032.1 Protein Homology CDS 30622 31446 . - 0 ID=cds-MCY7217598.1;Parent=gene-MK542_05365;Dbxref=NCBI_GP:MCY7217598.1;Name=MCY7217598.1;Ontology_term=GO:0006281,GO:0008534,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899890.1;locus_tag=MK542_05365;product=DNA-formamidopyrimidine glycosylase;protein_id=MCY7217598.1;transl_table=11 JAKUZA010000032.1 Genbank gene 31472 31681 . - . ID=gene-MK542_05370;Name=MK542_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05370 JAKUZA010000032.1 Protein Homology CDS 31472 31681 . - 0 ID=cds-MCY7217599.1;Parent=gene-MK542_05370;Dbxref=NCBI_GP:MCY7217599.1;Name=MCY7217599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906046.1;locus_tag=MK542_05370;product=helix-turn-helix transcriptional regulator;protein_id=MCY7217599.1;transl_table=11 JAKUZA010000032.1 Genbank gene 31681 32172 . - . ID=gene-MK542_05375;Name=MK542_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05375 JAKUZA010000032.1 Protein Homology CDS 31681 32172 . - 0 ID=cds-MCY7217600.1;Parent=gene-MK542_05375;Dbxref=NCBI_GP:MCY7217600.1;Name=MCY7217600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912963.1;locus_tag=MK542_05375;product=hypothetical protein;protein_id=MCY7217600.1;transl_table=11 JAKUZA010000032.1 Genbank gene 32304 33203 . - . ID=gene-MK542_05380;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=MK542_05380 JAKUZA010000032.1 Protein Homology CDS 32304 33203 . - 0 ID=cds-MCY7217601.1;Parent=gene-MK542_05380;Dbxref=NCBI_GP:MCY7217601.1;Name=MCY7217601.1;Ontology_term=GO:0005525;gbkey=CDS;gene=era;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894867.1;locus_tag=MK542_05380;product=GTPase Era;protein_id=MCY7217601.1;transl_table=11 JAKUZA010000032.1 Genbank gene 33270 33674 . - . ID=gene-MK542_05385;Name=MK542_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05385 JAKUZA010000032.1 Protein Homology CDS 33270 33674 . - 0 ID=cds-MCY7217602.1;Parent=gene-MK542_05385;Dbxref=NCBI_GP:MCY7217602.1;Name=MCY7217602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918638.1;locus_tag=MK542_05385;product=diacylglycerol kinase family protein;protein_id=MCY7217602.1;transl_table=11 JAKUZA010000032.1 Genbank gene 33655 34152 . - . ID=gene-MK542_05390;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=MK542_05390 JAKUZA010000032.1 Protein Homology CDS 33655 34152 . - 0 ID=cds-MCY7217603.1;Parent=gene-MK542_05390;Dbxref=NCBI_GP:MCY7217603.1;Name=MCY7217603.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=MK542_05390;product=rRNA maturation RNase YbeY;protein_id=MCY7217603.1;transl_table=11 JAKUZA010000032.1 Genbank gene 34471 34543 . - . ID=gene-MK542_05395;Name=MK542_05395;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_05395 JAKUZA010000032.1 tRNAscan-SE tRNA 34471 34543 . - . ID=rna-MK542_05395;Parent=gene-MK542_05395;anticodon=(pos:complement(34508..34510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_05395;product=tRNA-Thr JAKUZA010000032.1 tRNAscan-SE exon 34471 34543 . - . ID=exon-MK542_05395-1;Parent=rna-MK542_05395;anticodon=(pos:complement(34508..34510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_05395;product=tRNA-Thr JAKUZA010000032.1 Genbank gene 34593 35162 . - . ID=gene-MK542_05400;Name=MK542_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05400 JAKUZA010000032.1 Protein Homology CDS 34593 35162 . - 0 ID=cds-MCY7217604.1;Parent=gene-MK542_05400;Dbxref=NCBI_GP:MCY7217604.1;Name=MCY7217604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837248.1;locus_tag=MK542_05400;product=GNAT family N-acetyltransferase;protein_id=MCY7217604.1;transl_table=11 JAKUZA010000032.1 Genbank gene 35345 36457 . + . ID=gene-MK542_05405;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=MK542_05405 JAKUZA010000032.1 Protein Homology CDS 35345 36457 . + 0 ID=cds-MCY7217605.1;Parent=gene-MK542_05405;Dbxref=NCBI_GP:MCY7217605.1;Name=MCY7217605.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253293.1;locus_tag=MK542_05405;product=alanine dehydrogenase;protein_id=MCY7217605.1;transl_table=11 JAKUZA010000032.1 Genbank gene 36502 37497 . - . ID=gene-MK542_05410;Name=MK542_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05410 JAKUZA010000032.1 Protein Homology CDS 36502 37497 . - 0 ID=cds-MCY7217606.1;Parent=gene-MK542_05410;Dbxref=NCBI_GP:MCY7217606.1;Name=MCY7217606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914693.1;locus_tag=MK542_05410;product=PhoH family protein;protein_id=MCY7217606.1;transl_table=11 JAKUZA010000032.1 Genbank gene 37589 37804 . - . ID=gene-MK542_05415;Name=MK542_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05415 JAKUZA010000032.1 Protein Homology CDS 37589 37804 . - 0 ID=cds-MCY7217607.1;Parent=gene-MK542_05415;Dbxref=NCBI_GP:MCY7217607.1;Name=MCY7217607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894860.1;locus_tag=MK542_05415;product=YozE family protein;protein_id=MCY7217607.1;transl_table=11 JAKUZA010000032.1 Genbank gene 37865 38719 . - . ID=gene-MK542_05420;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=MK542_05420 JAKUZA010000032.1 Protein Homology CDS 37865 38719 . - 0 ID=cds-MCY7217608.1;Parent=gene-MK542_05420;Dbxref=NCBI_GP:MCY7217608.1;Name=MCY7217608.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095444.1;locus_tag=MK542_05420;product=RNA-binding virulence regulatory protein CvfB;protein_id=MCY7217608.1;transl_table=11 JAKUZA010000032.1 Genbank gene 38818 39375 . - . ID=gene-MK542_05425;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=MK542_05425 JAKUZA010000032.1 Protein Homology CDS 38818 39375 . - 0 ID=cds-MCY7217609.1;Parent=gene-MK542_05425;Dbxref=NCBI_GP:MCY7217609.1;Name=MCY7217609.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=MK542_05425;product=ribosome recycling factor;protein_id=MCY7217609.1;transl_table=11 JAKUZA010000032.1 Genbank gene 39394 40119 . - . ID=gene-MK542_05430;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=MK542_05430 JAKUZA010000032.1 Protein Homology CDS 39394 40119 . - 0 ID=cds-MCY7217610.1;Parent=gene-MK542_05430;Dbxref=NCBI_GP:MCY7217610.1;Name=MCY7217610.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894857.1;locus_tag=MK542_05430;product=UMP kinase;protein_id=MCY7217610.1;transl_table=11 JAKUZA010000032.1 Genbank gene 40256 40909 . - . ID=gene-MK542_05435;Name=MK542_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05435 JAKUZA010000032.1 Protein Homology CDS 40256 40909 . - 0 ID=cds-MCY7217611.1;Parent=gene-MK542_05435;Dbxref=NCBI_GP:MCY7217611.1;Name=MCY7217611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568191.1;locus_tag=MK542_05435;product=DUF1803 domain-containing protein;protein_id=MCY7217611.1;transl_table=11 JAKUZA010000032.1 Genbank gene 40902 41414 . - . ID=gene-MK542_05440;Name=MK542_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05440 JAKUZA010000032.1 Protein Homology CDS 40902 41414 . - 0 ID=cds-MCY7217612.1;Parent=gene-MK542_05440;Dbxref=NCBI_GP:MCY7217612.1;Name=MCY7217612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899780.1;locus_tag=MK542_05440;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=MCY7217612.1;transl_table=11 JAKUZA010000032.1 Genbank gene 41511 42446 . - . ID=gene-MK542_05445;Name=MK542_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05445 JAKUZA010000032.1 Protein Homology CDS 41511 42446 . - 0 ID=cds-MCY7217613.1;Parent=gene-MK542_05445;Dbxref=NCBI_GP:MCY7217613.1;Name=MCY7217613.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=MK542_05445;product=manganese-dependent inorganic pyrophosphatase;protein_id=MCY7217613.1;transl_table=11 JAKUZA010000032.1 Genbank gene 42574 43371 . - . ID=gene-MK542_05450;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=MK542_05450 JAKUZA010000032.1 Protein Homology CDS 42574 43371 . - 0 ID=cds-MCY7217614.1;Parent=gene-MK542_05450;Dbxref=NCBI_GP:MCY7217614.1;Name=MCY7217614.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130707.1;locus_tag=MK542_05450;product=pyruvate formate-lyase-activating protein;protein_id=MCY7217614.1;transl_table=11 JAKUZA010000032.1 Genbank gene 43750 45375 . - . ID=gene-MK542_05455;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=MK542_05455 JAKUZA010000032.1 Protein Homology CDS 43750 45375 . - 0 ID=cds-MCY7217615.1;Parent=gene-MK542_05455;Dbxref=NCBI_GP:MCY7217615.1;Name=MCY7217615.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923588.1;locus_tag=MK542_05455;product=alpha%2Calpha-phosphotrehalase;protein_id=MCY7217615.1;transl_table=11 JAKUZA010000032.1 Genbank gene 45438 47405 . - . ID=gene-MK542_05460;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=MK542_05460 JAKUZA010000032.1 Protein Homology CDS 45438 47405 . - 0 ID=cds-MCY7217616.1;Parent=gene-MK542_05460;Dbxref=NCBI_GP:MCY7217616.1;Name=MCY7217616.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016021;gbkey=CDS;gene=treP;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590789.1;locus_tag=MK542_05460;product=PTS system trehalose-specific EIIBC component;protein_id=MCY7217616.1;transl_table=11 JAKUZA010000032.1 Genbank gene 47591 48304 . + . ID=gene-MK542_05465;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=MK542_05465 JAKUZA010000032.1 Protein Homology CDS 47591 48304 . + 0 ID=cds-MCY7217617.1;Parent=gene-MK542_05465;Dbxref=NCBI_GP:MCY7217617.1;Name=MCY7217617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590790.1;locus_tag=MK542_05465;product=trehalose operon repressor;protein_id=MCY7217617.1;transl_table=11 JAKUZA010000032.1 Genbank gene 48759 49970 . - . ID=gene-MK542_05470;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=MK542_05470 JAKUZA010000032.1 Protein Homology CDS 48759 49970 . - 0 ID=cds-MCY7217618.1;Parent=gene-MK542_05470;Dbxref=NCBI_GP:MCY7217618.1;Name=MCY7217618.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904080.1;locus_tag=MK542_05470;product=NADP-dependent isocitrate dehydrogenase;protein_id=MCY7217618.1;transl_table=11 JAKUZA010000032.1 Genbank gene 49957 51075 . - . ID=gene-MK542_05475;Name=MK542_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05475 JAKUZA010000032.1 Protein Homology CDS 49957 51075 . - 0 ID=cds-MCY7217619.1;Parent=gene-MK542_05475;Dbxref=NCBI_GP:MCY7217619.1;Name=MCY7217619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929745.1;locus_tag=MK542_05475;product=citrate synthase;protein_id=MCY7217619.1;transl_table=11 JAKUZA010000032.1 Genbank gene 51078 53741 . - . ID=gene-MK542_05480;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=MK542_05480 JAKUZA010000032.1 Protein Homology CDS 51078 53741 . - 0 ID=cds-MCY7217620.1;Parent=gene-MK542_05480;Dbxref=NCBI_GP:MCY7217620.1;Name=MCY7217620.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130676.1;locus_tag=MK542_05480;product=aconitate hydratase AcnA;protein_id=MCY7217620.1;transl_table=11 JAKUZA010000032.1 Genbank gene 54100 55605 . - . ID=gene-MK542_05485;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=MK542_05485 JAKUZA010000032.1 Protein Homology CDS 54100 55605 . - 0 ID=cds-MCY7217621.1;Parent=gene-MK542_05485;Dbxref=NCBI_GP:MCY7217621.1;Name=MCY7217621.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809276.1;locus_tag=MK542_05485;product=pyruvate kinase;protein_id=MCY7217621.1;transl_table=11 JAKUZA010000032.1 Genbank gene 55657 56667 . - . ID=gene-MK542_05490;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=MK542_05490 JAKUZA010000032.1 Protein Homology CDS 55657 56667 . - 0 ID=cds-MCY7217622.1;Parent=gene-MK542_05490;Dbxref=NCBI_GP:MCY7217622.1;Name=MCY7217622.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590682.1;locus_tag=MK542_05490;product=6-phosphofructokinase;protein_id=MCY7217622.1;transl_table=11 JAKUZA010000032.1 Genbank gene 56752 59862 . - . ID=gene-MK542_05495;Name=MK542_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05495 JAKUZA010000032.1 Protein Homology CDS 56752 59862 . - 0 ID=cds-MCY7217623.1;Parent=gene-MK542_05495;Dbxref=NCBI_GP:MCY7217623.1;Name=MCY7217623.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270568.1;locus_tag=MK542_05495;product=DNA polymerase III subunit alpha;protein_id=MCY7217623.1;transl_table=11 JAKUZA010000032.1 Genbank gene 60042 60749 . + . ID=gene-MK542_05500;Name=MK542_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05500 JAKUZA010000032.1 Protein Homology CDS 60042 60749 . + 0 ID=cds-MCY7217624.1;Parent=gene-MK542_05500;Dbxref=NCBI_GP:MCY7217624.1;Name=MCY7217624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913696.1;locus_tag=MK542_05500;product=ABC transporter ATP-binding protein;protein_id=MCY7217624.1;transl_table=11 JAKUZA010000032.1 Genbank gene 60766 61578 . + . ID=gene-MK542_05505;Name=MK542_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05505 JAKUZA010000032.1 GeneMarkS-2+ CDS 60766 61578 . + 0 ID=cds-MCY7217625.1;Parent=gene-MK542_05505;Dbxref=NCBI_GP:MCY7217625.1;Name=MCY7217625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_05505;product=lantibiotic ABC transporter permease;protein_id=MCY7217625.1;transl_table=11 JAKUZA010000032.1 Genbank gene 61631 62860 . - . ID=gene-MK542_05510;Name=MK542_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05510 JAKUZA010000032.1 Protein Homology CDS 61631 62860 . - 0 ID=cds-MCY7217626.1;Parent=gene-MK542_05510;Dbxref=NCBI_GP:MCY7217626.1;Name=MCY7217626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925213.1;locus_tag=MK542_05510;product=hypothetical protein;protein_id=MCY7217626.1;transl_table=11 JAKUZA010000032.1 Genbank gene 62853 64022 . - . ID=gene-MK542_05515;Name=MK542_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05515 JAKUZA010000032.1 Protein Homology CDS 62853 64022 . - 0 ID=cds-MCY7217627.1;Parent=gene-MK542_05515;Dbxref=NCBI_GP:MCY7217627.1;Name=MCY7217627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604571.1;locus_tag=MK542_05515;product=AI-2E family transporter;protein_id=MCY7217627.1;transl_table=11 JAKUZA010000032.1 Genbank gene 64197 66593 . - . ID=gene-MK542_05520;Name=MK542_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05520 JAKUZA010000032.1 Protein Homology CDS 64197 66593 . - 0 ID=cds-MCY7217628.1;Parent=gene-MK542_05520;Dbxref=NCBI_GP:MCY7217628.1;Name=MCY7217628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191801.1;locus_tag=MK542_05520;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=MCY7217628.1;transl_table=11 JAKUZA010000032.1 Genbank gene 66746 68176 . - . ID=gene-MK542_05525;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=MK542_05525 JAKUZA010000032.1 Protein Homology CDS 66746 68176 . - 0 ID=cds-MCY7217629.1;Parent=gene-MK542_05525;Dbxref=NCBI_GP:MCY7217629.1;Name=MCY7217629.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069759.1;locus_tag=MK542_05525;product=glycogen synthase GlgA;protein_id=MCY7217629.1;transl_table=11 JAKUZA010000032.1 Genbank gene 68173 69312 . - . ID=gene-MK542_05530;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=MK542_05530 JAKUZA010000032.1 Protein Homology CDS 68173 69312 . - 0 ID=cds-MCY7217630.1;Parent=gene-MK542_05530;Dbxref=NCBI_GP:MCY7217630.1;Name=MCY7217630.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgD;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921778.1;locus_tag=MK542_05530;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=MCY7217630.1;transl_table=11 JAKUZA010000032.1 Genbank gene 69302 70444 . - . ID=gene-MK542_05535;Name=MK542_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05535 JAKUZA010000032.1 Protein Homology CDS 69302 70444 . - 0 ID=cds-MCY7217631.1;Parent=gene-MK542_05535;Dbxref=NCBI_GP:MCY7217631.1;Name=MCY7217631.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787267.1;locus_tag=MK542_05535;product=glucose-1-phosphate adenylyltransferase;protein_id=MCY7217631.1;transl_table=11 JAKUZA010000032.1 Genbank gene 70448 72361 . - . ID=gene-MK542_05540;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=MK542_05540 JAKUZA010000032.1 Protein Homology CDS 70448 72361 . - 0 ID=cds-MCY7217632.1;Parent=gene-MK542_05540;Dbxref=NCBI_GP:MCY7217632.1;Name=MCY7217632.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925407.1;locus_tag=MK542_05540;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=MCY7217632.1;transl_table=11 JAKUZA010000032.1 Genbank gene 72692 74116 . - . ID=gene-MK542_05545;Name=MK542_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05545 JAKUZA010000032.1 Protein Homology CDS 72692 74116 . - 0 ID=cds-MCY7217633.1;Parent=gene-MK542_05545;Dbxref=NCBI_GP:MCY7217633.1;Name=MCY7217633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000199391.1;locus_tag=MK542_05545;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=MCY7217633.1;transl_table=11 JAKUZA010000032.1 Genbank gene 74277 76010 . - . ID=gene-MK542_05550;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=MK542_05550 JAKUZA010000032.1 Protein Homology CDS 74277 76010 . - 0 ID=cds-MCY7217634.1;Parent=gene-MK542_05550;Dbxref=NCBI_GP:MCY7217634.1;Name=MCY7217634.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397822.1;locus_tag=MK542_05550;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=MCY7217634.1;transl_table=11 JAKUZA010000032.1 Genbank gene 76012 76275 . - . ID=gene-MK542_05555;Name=MK542_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05555 JAKUZA010000032.1 Protein Homology CDS 76012 76275 . - 0 ID=cds-MCY7217635.1;Parent=gene-MK542_05555;Dbxref=NCBI_GP:MCY7217635.1;Name=MCY7217635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=MK542_05555;product=phosphocarrier protein HPr;protein_id=MCY7217635.1;transl_table=11 JAKUZA010000032.1 Genbank gene 76763 76981 . + . ID=gene-MK542_05560;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=MK542_05560 JAKUZA010000032.1 Protein Homology CDS 76763 76981 . + 0 ID=cds-MCY7217636.1;Parent=gene-MK542_05560;Dbxref=NCBI_GP:MCY7217636.1;Name=MCY7217636.1;Ontology_term=GO:0097573;gbkey=CDS;gene=nrdH;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259243.1;locus_tag=MK542_05560;product=glutaredoxin-like protein NrdH;protein_id=MCY7217636.1;transl_table=11 JAKUZA010000032.1 Genbank gene 77076 79235 . + . ID=gene-MK542_05565;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=MK542_05565 JAKUZA010000032.1 Protein Homology CDS 77076 79235 . + 0 ID=cds-MCY7217637.1;Parent=gene-MK542_05565;Dbxref=NCBI_GP:MCY7217637.1;Name=MCY7217637.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=MK542_05565;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=MCY7217637.1;transl_table=11 JAKUZA010000032.1 Genbank gene 79375 80334 . + . ID=gene-MK542_05570;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=MK542_05570 JAKUZA010000032.1 Protein Homology CDS 79375 80334 . + 0 ID=cds-MCY7217638.1;Parent=gene-MK542_05570;Dbxref=NCBI_GP:MCY7217638.1;Name=MCY7217638.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253599.1;locus_tag=MK542_05570;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=MCY7217638.1;transl_table=11 JAKUZA010000032.1 Genbank gene 80507 82069 . - . ID=gene-MK542_05575;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=MK542_05575 JAKUZA010000032.1 Protein Homology CDS 80507 82069 . - 0 ID=cds-MCY7217639.1;Parent=gene-MK542_05575;Dbxref=NCBI_GP:MCY7217639.1;Name=MCY7217639.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659247.1;locus_tag=MK542_05575;product=signal recognition particle-docking protein FtsY;protein_id=MCY7217639.1;transl_table=11 JAKUZA010000032.1 Genbank gene 82073 82891 . - . ID=gene-MK542_05580;Name=MK542_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05580 JAKUZA010000032.1 Protein Homology CDS 82073 82891 . - 0 ID=cds-MCY7217640.1;Parent=gene-MK542_05580;Dbxref=NCBI_GP:MCY7217640.1;Name=MCY7217640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465979.1;locus_tag=MK542_05580;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7217640.1;transl_table=11 JAKUZA010000032.1 Genbank gene 82891 83685 . - . ID=gene-MK542_05585;Name=MK542_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05585 JAKUZA010000032.1 Protein Homology CDS 82891 83685 . - 0 ID=cds-MCY7217641.1;Parent=gene-MK542_05585;Dbxref=NCBI_GP:MCY7217641.1;Name=MCY7217641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153012.1;locus_tag=MK542_05585;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7217641.1;transl_table=11 JAKUZA010000032.1 Genbank gene 83687 87223 . - . ID=gene-MK542_05590;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=MK542_05590 JAKUZA010000032.1 Protein Homology CDS 83687 87223 . - 0 ID=cds-MCY7217642.1;Parent=gene-MK542_05590;Dbxref=NCBI_GP:MCY7217642.1;Name=MCY7217642.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931064.1;locus_tag=MK542_05590;product=chromosome segregation protein SMC;protein_id=MCY7217642.1;transl_table=11 JAKUZA010000032.1 Genbank gene 87223 87912 . - . ID=gene-MK542_05595;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=MK542_05595 JAKUZA010000032.1 Protein Homology CDS 87223 87912 . - 0 ID=cds-MCY7217643.1;Parent=gene-MK542_05595;Dbxref=NCBI_GP:MCY7217643.1;Name=MCY7217643.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589493.1;locus_tag=MK542_05595;product=ribonuclease III;protein_id=MCY7217643.1;transl_table=11 JAKUZA010000032.1 Genbank gene 88058 88417 . - . ID=gene-MK542_05600;Name=MK542_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05600 JAKUZA010000032.1 Protein Homology CDS 88058 88417 . - 0 ID=cds-MCY7217644.1;Parent=gene-MK542_05600;Dbxref=NCBI_GP:MCY7217644.1;Name=MCY7217644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258004.1;locus_tag=MK542_05600;product=YbaN family protein;protein_id=MCY7217644.1;transl_table=11 JAKUZA010000032.1 Genbank gene 88590 89390 . - . ID=gene-MK542_05605;Name=MK542_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05605 JAKUZA010000032.1 Protein Homology CDS 88590 89390 . - 0 ID=cds-MCY7217645.1;Parent=gene-MK542_05605;Dbxref=NCBI_GP:MCY7217645.1;Name=MCY7217645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931067.1;locus_tag=MK542_05605;product=MBL fold metallo-hydrolase;protein_id=MCY7217645.1;transl_table=11 JAKUZA010000032.1 Genbank gene 89383 90756 . - . ID=gene-MK542_05610;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=MK542_05610 JAKUZA010000032.1 Protein Homology CDS 89383 90756 . - 0 ID=cds-MCY7217646.1;Parent=gene-MK542_05610;Dbxref=NCBI_GP:MCY7217646.1;Name=MCY7217646.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605197.1;locus_tag=MK542_05610;product=cell wall metabolism sensor histidine kinase VicK;protein_id=MCY7217646.1;transl_table=11 JAKUZA010000032.1 Genbank gene 90749 91450 . - . ID=gene-MK542_05615;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=MK542_05615 JAKUZA010000032.1 Protein Homology CDS 90749 91450 . - 0 ID=cds-MCY7217647.1;Parent=gene-MK542_05615;Dbxref=NCBI_GP:MCY7217647.1;Name=MCY7217647.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589489.1;locus_tag=MK542_05615;product=response regulator YycF;protein_id=MCY7217647.1;transl_table=11 JAKUZA010000032.1 Genbank gene 91719 92129 . + . ID=gene-MK542_05620;Name=MK542_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05620 JAKUZA010000032.1 Protein Homology CDS 91719 92129 . + 0 ID=cds-MCY7217648.1;Parent=gene-MK542_05620;Dbxref=NCBI_GP:MCY7217648.1;Name=MCY7217648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837213.1;locus_tag=MK542_05620;product=hypothetical protein;protein_id=MCY7217648.1;transl_table=11 JAKUZA010000032.1 Genbank gene 92352 93041 . - . ID=gene-MK542_05625;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=MK542_05625 JAKUZA010000032.1 Protein Homology CDS 92352 93041 . - 0 ID=cds-MCY7217649.1;Parent=gene-MK542_05625;Dbxref=NCBI_GP:MCY7217649.1;Name=MCY7217649.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=MK542_05625;product=50S ribosomal protein L1;protein_id=MCY7217649.1;transl_table=11 JAKUZA010000032.1 Genbank gene 93156 93581 . - . ID=gene-MK542_05630;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=MK542_05630 JAKUZA010000032.1 Protein Homology CDS 93156 93581 . - 0 ID=cds-MCY7217650.1;Parent=gene-MK542_05630;Dbxref=NCBI_GP:MCY7217650.1;Name=MCY7217650.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226069.1;locus_tag=MK542_05630;product=50S ribosomal protein L11;protein_id=MCY7217650.1;transl_table=11 JAKUZA010000032.1 Genbank gene 93732 94085 . + . ID=gene-MK542_05635;Name=MK542_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05635 JAKUZA010000032.1 Protein Homology CDS 93732 94085 . + 0 ID=cds-MCY7217651.1;Parent=gene-MK542_05635;Dbxref=NCBI_GP:MCY7217651.1;Name=MCY7217651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034264.1;locus_tag=MK542_05635;product=DUF3397 domain-containing protein;protein_id=MCY7217651.1;transl_table=11 JAKUZA010000032.1 Genbank gene 94107 94493 . - . ID=gene-MK542_05640;Name=MK542_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05640 JAKUZA010000032.1 Protein Homology CDS 94107 94493 . - 0 ID=cds-MCY7217652.1;Parent=gene-MK542_05640;Dbxref=NCBI_GP:MCY7217652.1;Name=MCY7217652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931159.1;locus_tag=MK542_05640;product=VOC family protein;protein_id=MCY7217652.1;transl_table=11 JAKUZA010000032.1 Genbank gene 94601 96898 . - . ID=gene-MK542_05645;Name=MK542_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05645 JAKUZA010000032.1 Protein Homology CDS 94601 96898 . - 0 ID=cds-MCY7217653.1;Parent=gene-MK542_05645;Dbxref=NCBI_GP:MCY7217653.1;Name=MCY7217653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899877.1;locus_tag=MK542_05645;product=DNA translocase FtsK;protein_id=MCY7217653.1;transl_table=11 JAKUZA010000032.1 Genbank pseudogene 97090 97548 . - . ID=gene-MK542_05650;Name=MK542_05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05650;pseudo=true JAKUZA010000032.1 Protein Homology CDS 97090 97548 . - 0 ID=cds-MK542_05650;Parent=gene-MK542_05650;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905998.1;locus_tag=MK542_05650;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAKUZA010000032.1 Genbank gene 97564 97980 . - . ID=gene-MK542_05655;Name=MK542_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05655 JAKUZA010000032.1 Protein Homology CDS 97564 97980 . - 0 ID=cds-MCY7217654.1;Parent=gene-MK542_05655;Dbxref=NCBI_GP:MCY7217654.1;Name=MCY7217654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932768.1;locus_tag=MK542_05655;product=GNAT family N-acetyltransferase;protein_id=MCY7217654.1;transl_table=11 JAKUZA010000032.1 Genbank gene 98163 98426 . - . ID=gene-MK542_05660;Name=MK542_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05660 JAKUZA010000032.1 Protein Homology CDS 98163 98426 . - 0 ID=cds-MCY7217655.1;Parent=gene-MK542_05660;Dbxref=NCBI_GP:MCY7217655.1;Name=MCY7217655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923739.1;locus_tag=MK542_05660;product=hypothetical protein;protein_id=MCY7217655.1;transl_table=11 JAKUZA010000032.1 Genbank gene 98469 99869 . - . ID=gene-MK542_05665;Name=MK542_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05665 JAKUZA010000032.1 Protein Homology CDS 98469 99869 . - 0 ID=cds-MCY7217656.1;Parent=gene-MK542_05665;Dbxref=NCBI_GP:MCY7217656.1;Name=MCY7217656.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605623.1;locus_tag=MK542_05665;product=amino acid permease;protein_id=MCY7217656.1;transl_table=11 JAKUZA010000032.1 Genbank gene 100001 101989 . - . ID=gene-MK542_05670;Name=MK542_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05670 JAKUZA010000032.1 Protein Homology CDS 100001 101989 . - 0 ID=cds-MCY7217657.1;Parent=gene-MK542_05670;Dbxref=NCBI_GP:MCY7217657.1;Name=MCY7217657.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905044.1;locus_tag=MK542_05670;product=FtsX-like permease family protein;protein_id=MCY7217657.1;transl_table=11 JAKUZA010000032.1 Genbank gene 101982 102749 . - . ID=gene-MK542_05675;Name=MK542_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05675 JAKUZA010000032.1 Protein Homology CDS 101982 102749 . - 0 ID=cds-MCY7217658.1;Parent=gene-MK542_05675;Dbxref=NCBI_GP:MCY7217658.1;Name=MCY7217658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568235.1;locus_tag=MK542_05675;product=ABC transporter ATP-binding protein;protein_id=MCY7217658.1;transl_table=11 JAKUZA010000032.1 Genbank pseudogene 103502 103756 . - . ID=gene-MK542_05680;Name=MK542_05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05680;pseudo=true JAKUZA010000032.1 Protein Homology CDS 103502 103756 . - 0 ID=cds-MK542_05680;Parent=gene-MK542_05680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006464;gbkey=CDS;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590959.1;locus_tag=MK542_05680;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000033.1 1 56227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000033.1 Genbank region 1 56227 . + . ID=JAKUZA010000033.1:1..56227;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000033.1 Genbank gene 1 274 . + . ID=gene-MK542_05685;Name=MK542_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05685;partial=true;start_range=.,1 JAKUZA010000033.1 Protein Homology CDS 1 274 . + 1 ID=cds-MCY7217659.1;Parent=gene-MK542_05685;Dbxref=NCBI_GP:MCY7217659.1;Name=MCY7217659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_05685;partial=true;product=transposase;protein_id=MCY7217659.1;start_range=.,1;transl_table=11 JAKUZA010000033.1 Genbank pseudogene 400 583 . - . ID=gene-MK542_05690;Name=MK542_05690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05690;pseudo=true JAKUZA010000033.1 Protein Homology CDS 400 583 . - 0 ID=cds-MK542_05690;Parent=gene-MK542_05690;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155197.1;locus_tag=MK542_05690;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11 JAKUZA010000033.1 Genbank gene 588 3128 . - . ID=gene-MK542_05695;Name=MK542_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05695 JAKUZA010000033.1 Protein Homology CDS 588 3128 . - 0 ID=cds-MCY7217660.1;Parent=gene-MK542_05695;Dbxref=NCBI_GP:MCY7217660.1;Name=MCY7217660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014335.1;locus_tag=MK542_05695;product=toll/interleukin-1 receptor domain-containing protein;protein_id=MCY7217660.1;transl_table=11 JAKUZA010000033.1 Genbank gene 3209 5860 . - . ID=gene-MK542_05700;Name=MK542_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05700 JAKUZA010000033.1 Protein Homology CDS 3209 5860 . - 0 ID=cds-MCY7217661.1;Parent=gene-MK542_05700;Dbxref=NCBI_GP:MCY7217661.1;Name=MCY7217661.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732359.1;locus_tag=MK542_05700;product=valine--tRNA ligase;protein_id=MCY7217661.1;transl_table=11 JAKUZA010000033.1 Genbank gene 5882 6622 . - . ID=gene-MK542_05705;Name=MK542_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05705 JAKUZA010000033.1 GeneMarkS-2+ CDS 5882 6622 . - 0 ID=cds-MCY7217662.1;Parent=gene-MK542_05705;Dbxref=NCBI_GP:MCY7217662.1;Name=MCY7217662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_05705;product=DNA/RNA non-specific endonuclease;protein_id=MCY7217662.1;transl_table=11 JAKUZA010000033.1 Genbank pseudogene 6615 6770 . - . ID=gene-MK542_05710;Name=MK542_05710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05710;pseudo=true JAKUZA010000033.1 Protein Homology CDS 6615 6770 . - 0 ID=cds-MK542_05710;Parent=gene-MK542_05710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198668.1;locus_tag=MK542_05710;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAKUZA010000033.1 Genbank gene 6794 8035 . - . ID=gene-MK542_05715;Name=MK542_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05715 JAKUZA010000033.1 Protein Homology CDS 6794 8035 . - 0 ID=cds-MCY7217663.1;Parent=gene-MK542_05715;Dbxref=NCBI_GP:MCY7217663.1;Name=MCY7217663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886782.1;locus_tag=MK542_05715;product=hypothetical protein;protein_id=MCY7217663.1;transl_table=11 JAKUZA010000033.1 Genbank gene 8028 8597 . - . ID=gene-MK542_05720;Name=MK542_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05720 JAKUZA010000033.1 Protein Homology CDS 8028 8597 . - 0 ID=cds-MCY7217664.1;Parent=gene-MK542_05720;Dbxref=NCBI_GP:MCY7217664.1;Name=MCY7217664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888108.1;locus_tag=MK542_05720;product=GNAT family N-acetyltransferase;protein_id=MCY7217664.1;transl_table=11 JAKUZA010000033.1 Genbank gene 8862 9116 . - . ID=gene-MK542_05725;Name=MK542_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05725 JAKUZA010000033.1 Protein Homology CDS 8862 9116 . - 0 ID=cds-MCY7217665.1;Parent=gene-MK542_05725;Dbxref=NCBI_GP:MCY7217665.1;Name=MCY7217665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119704.1;locus_tag=MK542_05725;product=DUF1912 family protein;protein_id=MCY7217665.1;transl_table=11 JAKUZA010000033.1 Genbank gene 9143 10504 . - . ID=gene-MK542_05730;Name=MK542_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05730 JAKUZA010000033.1 Protein Homology CDS 9143 10504 . - 0 ID=cds-MCY7217666.1;Parent=gene-MK542_05730;Dbxref=NCBI_GP:MCY7217666.1;Name=MCY7217666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809143.1;locus_tag=MK542_05730;product=DUF438 domain-containing protein;protein_id=MCY7217666.1;transl_table=11 JAKUZA010000033.1 Genbank gene 10507 10737 . - . ID=gene-MK542_05735;Name=MK542_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05735 JAKUZA010000033.1 Protein Homology CDS 10507 10737 . - 0 ID=cds-MCY7217667.1;Parent=gene-MK542_05735;Dbxref=NCBI_GP:MCY7217667.1;Name=MCY7217667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754935.1;locus_tag=MK542_05735;product=DUF1858 domain-containing protein;protein_id=MCY7217667.1;transl_table=11 JAKUZA010000033.1 Genbank gene 11030 11962 . + . ID=gene-MK542_05740;Name=MK542_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05740 JAKUZA010000033.1 Protein Homology CDS 11030 11962 . + 0 ID=cds-MCY7217668.1;Parent=gene-MK542_05740;Dbxref=NCBI_GP:MCY7217668.1;Name=MCY7217668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028397.1;locus_tag=MK542_05740;product=nitronate monooxygenase;protein_id=MCY7217668.1;transl_table=11 JAKUZA010000033.1 Genbank gene 12040 12474 . - . ID=gene-MK542_05745;Name=MK542_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05745 JAKUZA010000033.1 Protein Homology CDS 12040 12474 . - 0 ID=cds-MCY7217669.1;Parent=gene-MK542_05745;Dbxref=NCBI_GP:MCY7217669.1;Name=MCY7217669.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=MK542_05745;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217669.1;transl_table=11 JAKUZA010000033.1 Genbank gene 12515 12679 . - . ID=gene-MK542_05750;Name=MK542_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05750 JAKUZA010000033.1 Protein Homology CDS 12515 12679 . - 0 ID=cds-MCY7217670.1;Parent=gene-MK542_05750;Dbxref=NCBI_GP:MCY7217670.1;Name=MCY7217670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711941.1;locus_tag=MK542_05750;product=hypothetical protein;protein_id=MCY7217670.1;transl_table=11 JAKUZA010000033.1 Genbank gene 12827 13678 . + . ID=gene-MK542_05755;Name=MK542_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05755 JAKUZA010000033.1 Protein Homology CDS 12827 13678 . + 0 ID=cds-MCY7217671.1;Parent=gene-MK542_05755;Dbxref=NCBI_GP:MCY7217671.1;Name=MCY7217671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016182753.1;locus_tag=MK542_05755;product=helix-turn-helix domain-containing protein;protein_id=MCY7217671.1;transl_table=11 JAKUZA010000033.1 Genbank pseudogene 13688 14264 . - . ID=gene-MK542_05760;Name=MK542_05760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05760;pseudo=true JAKUZA010000033.1 Protein Homology CDS 13688 14264 . - 0 ID=cds-MK542_05760;Parent=gene-MK542_05760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648301.1;locus_tag=MK542_05760;product=replication initiator protein A;pseudo=true;transl_table=11 JAKUZA010000033.1 Genbank gene 14261 14434 . - . ID=gene-MK542_05765;Name=MK542_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05765 JAKUZA010000033.1 Protein Homology CDS 14261 14434 . - 0 ID=cds-MCY7217672.1;Parent=gene-MK542_05765;Dbxref=NCBI_GP:MCY7217672.1;Name=MCY7217672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767814.1;locus_tag=MK542_05765;product=hypothetical protein;protein_id=MCY7217672.1;transl_table=11 JAKUZA010000033.1 Genbank gene 14553 15911 . - . ID=gene-MK542_05770;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=MK542_05770 JAKUZA010000033.1 Protein Homology CDS 14553 15911 . - 0 ID=cds-MCY7217673.1;Parent=gene-MK542_05770;Dbxref=NCBI_GP:MCY7217673.1;Name=MCY7217673.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605547.1;locus_tag=MK542_05770;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MCY7217673.1;transl_table=11 JAKUZA010000033.1 Genbank gene 15967 16743 . + . ID=gene-MK542_05775;Name=MK542_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05775 JAKUZA010000033.1 Protein Homology CDS 15967 16743 . + 0 ID=cds-MCY7217674.1;Parent=gene-MK542_05775;Dbxref=NCBI_GP:MCY7217674.1;Name=MCY7217674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896980.1;locus_tag=MK542_05775;product=aminoglycoside 3'-phosphotransferase;protein_id=MCY7217674.1;transl_table=11 JAKUZA010000033.1 Genbank gene 16770 17546 . + . ID=gene-MK542_05780;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=MK542_05780 JAKUZA010000033.1 Protein Homology CDS 16770 17546 . + 0 ID=cds-MCY7217675.1;Parent=gene-MK542_05780;Dbxref=NCBI_GP:MCY7217675.1;Name=MCY7217675.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605548.1;locus_tag=MK542_05780;product=recombination regulator RecX;protein_id=MCY7217675.1;transl_table=11 JAKUZA010000033.1 Genbank gene 17633 18166 . + . ID=gene-MK542_05785;Name=MK542_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05785 JAKUZA010000033.1 Protein Homology CDS 17633 18166 . + 0 ID=cds-MCY7217676.1;Parent=gene-MK542_05785;Dbxref=NCBI_GP:MCY7217676.1;Name=MCY7217676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=MK542_05785;product=DUF402 domain-containing protein;protein_id=MCY7217676.1;transl_table=11 JAKUZA010000033.1 Genbank gene 18342 18659 . + . ID=gene-MK542_05790;Name=MK542_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05790 JAKUZA010000033.1 Protein Homology CDS 18342 18659 . + 0 ID=cds-MCY7217677.1;Parent=gene-MK542_05790;Dbxref=NCBI_GP:MCY7217677.1;Name=MCY7217677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914500.1;locus_tag=MK542_05790;product=DUF960 domain-containing protein;protein_id=MCY7217677.1;transl_table=11 JAKUZA010000033.1 Genbank gene 18719 19153 . - . ID=gene-MK542_05795;Name=MK542_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05795 JAKUZA010000033.1 Protein Homology CDS 18719 19153 . - 0 ID=cds-MCY7217678.1;Parent=gene-MK542_05795;Dbxref=NCBI_GP:MCY7217678.1;Name=MCY7217678.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659940.1;locus_tag=MK542_05795;product=GNAT family N-acetyltransferase;protein_id=MCY7217678.1;transl_table=11 JAKUZA010000033.1 Genbank pseudogene 19164 19631 . + . ID=gene-MK542_05800;Name=MK542_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_05800;pseudo=true JAKUZA010000033.1 Protein Homology CDS 19164 19631 . + 0 ID=cds-MK542_05800;Parent=gene-MK542_05800;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925562.1;locus_tag=MK542_05800;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 JAKUZA010000033.1 Genbank gene 19841 22633 . - . ID=gene-MK542_05805;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=MK542_05805 JAKUZA010000033.1 Protein Homology CDS 19841 22633 . - 0 ID=cds-MCY7217679.1;Parent=gene-MK542_05805;Dbxref=NCBI_GP:MCY7217679.1;Name=MCY7217679.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000155.1;locus_tag=MK542_05805;product=isoleucine--tRNA ligase;protein_id=MCY7217679.1;transl_table=11 JAKUZA010000033.1 Genbank gene 22885 23676 . - . ID=gene-MK542_05810;Name=MK542_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05810 JAKUZA010000033.1 Protein Homology CDS 22885 23676 . - 0 ID=cds-MCY7217680.1;Parent=gene-MK542_05810;Dbxref=NCBI_GP:MCY7217680.1;Name=MCY7217680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907042.1;locus_tag=MK542_05810;product=DivIVA domain-containing protein;protein_id=MCY7217680.1;transl_table=11 JAKUZA010000033.1 Genbank gene 23686 24471 . - . ID=gene-MK542_05815;Name=MK542_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05815 JAKUZA010000033.1 Protein Homology CDS 23686 24471 . - 0 ID=cds-MCY7217681.1;Parent=gene-MK542_05815;Dbxref=NCBI_GP:MCY7217681.1;Name=MCY7217681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932716.1;locus_tag=MK542_05815;product=YlmH/Sll1252 family protein;protein_id=MCY7217681.1;transl_table=11 JAKUZA010000033.1 Genbank gene 24465 24740 . - . ID=gene-MK542_05820;Name=MK542_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05820 JAKUZA010000033.1 Protein Homology CDS 24465 24740 . - 0 ID=cds-MCY7217682.1;Parent=gene-MK542_05820;Dbxref=NCBI_GP:MCY7217682.1;Name=MCY7217682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590800.1;locus_tag=MK542_05820;product=YggT family protein;protein_id=MCY7217682.1;transl_table=11 JAKUZA010000033.1 Genbank gene 24744 25301 . - . ID=gene-MK542_05825;Name=MK542_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05825 JAKUZA010000033.1 Protein Homology CDS 24744 25301 . - 0 ID=cds-MCY7217683.1;Parent=gene-MK542_05825;Dbxref=NCBI_GP:MCY7217683.1;Name=MCY7217683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900916.1;locus_tag=MK542_05825;product=cell division protein SepF;protein_id=MCY7217683.1;transl_table=11 JAKUZA010000033.1 Genbank gene 25311 25982 . - . ID=gene-MK542_05830;Name=MK542_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05830 JAKUZA010000033.1 Protein Homology CDS 25311 25982 . - 0 ID=cds-MCY7217684.1;Parent=gene-MK542_05830;Dbxref=NCBI_GP:MCY7217684.1;Name=MCY7217684.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900917.1;locus_tag=MK542_05830;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=MCY7217684.1;transl_table=11 JAKUZA010000033.1 Genbank gene 25991 27259 . - . ID=gene-MK542_05835;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=MK542_05835 JAKUZA010000033.1 Protein Homology CDS 25991 27259 . - 0 ID=cds-MCY7217685.1;Parent=gene-MK542_05835;Dbxref=NCBI_GP:MCY7217685.1;Name=MCY7217685.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144288.1;locus_tag=MK542_05835;product=cell division protein FtsZ;protein_id=MCY7217685.1;transl_table=11 JAKUZA010000033.1 Genbank gene 27276 28634 . - . ID=gene-MK542_05840;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=MK542_05840 JAKUZA010000033.1 Protein Homology CDS 27276 28634 . - 0 ID=cds-MCY7217686.1;Parent=gene-MK542_05840;Dbxref=NCBI_GP:MCY7217686.1;Name=MCY7217686.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187878.1;locus_tag=MK542_05840;product=cell division protein FtsA;protein_id=MCY7217686.1;transl_table=11 JAKUZA010000033.1 Genbank gene 28754 29938 . - . ID=gene-MK542_05845;Name=MK542_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05845 JAKUZA010000033.1 Protein Homology CDS 28754 29938 . - 0 ID=cds-MCY7217687.1;Parent=gene-MK542_05845;Dbxref=NCBI_GP:MCY7217687.1;Name=MCY7217687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605503.1;locus_tag=MK542_05845;product=FtsQ-type POTRA domain-containing protein;protein_id=MCY7217687.1;transl_table=11 JAKUZA010000033.1 Genbank gene 29935 31005 . - . ID=gene-MK542_05850;Name=MK542_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05850 JAKUZA010000033.1 Protein Homology CDS 29935 31005 . - 0 ID=cds-MCY7217688.1;Parent=gene-MK542_05850;Dbxref=NCBI_GP:MCY7217688.1;Name=MCY7217688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836646.1;locus_tag=MK542_05850;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=MCY7217688.1;transl_table=11 JAKUZA010000033.1 Genbank gene 31007 32359 . - . ID=gene-MK542_05855;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=MK542_05855 JAKUZA010000033.1 Protein Homology CDS 31007 32359 . - 0 ID=cds-MCY7217689.1;Parent=gene-MK542_05855;Dbxref=NCBI_GP:MCY7217689.1;Name=MCY7217689.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000146.1;locus_tag=MK542_05855;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=MCY7217689.1;transl_table=11 JAKUZA010000033.1 Genbank gene 32643 32921 . - . ID=gene-MK542_05860;Name=MK542_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05860 JAKUZA010000033.1 Protein Homology CDS 32643 32921 . - 0 ID=cds-MCY7217690.1;Parent=gene-MK542_05860;Dbxref=NCBI_GP:MCY7217690.1;Name=MCY7217690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809110.1;locus_tag=MK542_05860;product=DUF3165 family protein;protein_id=MCY7217690.1;transl_table=11 JAKUZA010000033.1 Genbank gene 32957 34804 . - . ID=gene-MK542_05865;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=MK542_05865 JAKUZA010000033.1 Protein Homology CDS 32957 34804 . - 0 ID=cds-MCY7217691.1;Parent=gene-MK542_05865;Dbxref=NCBI_GP:MCY7217691.1;Name=MCY7217691.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932699.1;locus_tag=MK542_05865;product=translational GTPase TypA;protein_id=MCY7217691.1;transl_table=11 JAKUZA010000033.1 Genbank gene 35064 35789 . + . ID=gene-MK542_05870;Name=MK542_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05870 JAKUZA010000033.1 Protein Homology CDS 35064 35789 . + 0 ID=cds-MCY7217692.1;Parent=gene-MK542_05870;Dbxref=NCBI_GP:MCY7217692.1;Name=MCY7217692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898042.1;locus_tag=MK542_05870;product=rRNA pseudouridine synthase;protein_id=MCY7217692.1;transl_table=11 JAKUZA010000033.1 Genbank gene 35830 36066 . - . ID=gene-MK542_05875;Name=MK542_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05875 JAKUZA010000033.1 Protein Homology CDS 35830 36066 . - 0 ID=cds-MCY7217693.1;Parent=gene-MK542_05875;Dbxref=NCBI_GP:MCY7217693.1;Name=MCY7217693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898043.1;locus_tag=MK542_05875;product=DUF4190 domain-containing protein;protein_id=MCY7217693.1;transl_table=11 JAKUZA010000033.1 Genbank gene 36154 36534 . - . ID=gene-MK542_05880;Name=MK542_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05880 JAKUZA010000033.1 Protein Homology CDS 36154 36534 . - 0 ID=cds-MCY7217694.1;Parent=gene-MK542_05880;Dbxref=NCBI_GP:MCY7217694.1;Name=MCY7217694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520409.1;locus_tag=MK542_05880;product=rhodanese-like domain-containing protein;protein_id=MCY7217694.1;transl_table=11 JAKUZA010000033.1 Genbank gene 36536 36754 . - . ID=gene-MK542_05885;Name=MK542_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05885 JAKUZA010000033.1 Protein Homology CDS 36536 36754 . - 0 ID=cds-MCY7217695.1;Parent=gene-MK542_05885;Dbxref=NCBI_GP:MCY7217695.1;Name=MCY7217695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808324.1;locus_tag=MK542_05885;product=YqgQ family protein;protein_id=MCY7217695.1;transl_table=11 JAKUZA010000033.1 Genbank gene 36984 37499 . - . ID=gene-MK542_05890;Name=MK542_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05890 JAKUZA010000033.1 Protein Homology CDS 36984 37499 . - 0 ID=cds-MCY7217696.1;Parent=gene-MK542_05890;Dbxref=NCBI_GP:MCY7217696.1;Name=MCY7217696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187901.1;locus_tag=MK542_05890;product=DNA starvation/stationary phase protection protein;protein_id=MCY7217696.1;transl_table=11 JAKUZA010000033.1 Genbank gene 37667 38329 . + . ID=gene-MK542_05895;Name=MK542_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05895 JAKUZA010000033.1 Protein Homology CDS 37667 38329 . + 0 ID=cds-MCY7217697.1;Parent=gene-MK542_05895;Dbxref=NCBI_GP:MCY7217697.1;Name=MCY7217697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898047.1;locus_tag=MK542_05895;product=prepilin peptidase;protein_id=MCY7217697.1;transl_table=11 JAKUZA010000033.1 Genbank gene 38318 38881 . - . ID=gene-MK542_05900;Name=MK542_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05900 JAKUZA010000033.1 Protein Homology CDS 38318 38881 . - 0 ID=cds-MCY7217698.1;Parent=gene-MK542_05900;Dbxref=NCBI_GP:MCY7217698.1;Name=MCY7217698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590815.1;locus_tag=MK542_05900;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=MCY7217698.1;transl_table=11 JAKUZA010000033.1 Genbank gene 38974 40155 . - . ID=gene-MK542_05905;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=MK542_05905 JAKUZA010000033.1 Protein Homology CDS 38974 40155 . - 0 ID=cds-MCY7217699.1;Parent=gene-MK542_05905;Dbxref=NCBI_GP:MCY7217699.1;Name=MCY7217699.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913816.1;locus_tag=MK542_05905;product=tryptophan synthase subunit beta;protein_id=MCY7217699.1;transl_table=11 JAKUZA010000033.1 Genbank gene 40546 41085 . - . ID=gene-MK542_05910;Name=MK542_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05910 JAKUZA010000033.1 Protein Homology CDS 40546 41085 . - 0 ID=cds-MCY7217700.1;Parent=gene-MK542_05910;Dbxref=NCBI_GP:MCY7217700.1;Name=MCY7217700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000133.1;locus_tag=MK542_05910;product=VanZ family protein;protein_id=MCY7217700.1;transl_table=11 JAKUZA010000033.1 Genbank gene 41072 42160 . - . ID=gene-MK542_05915;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=MK542_05915 JAKUZA010000033.1 Protein Homology CDS 41072 42160 . - 0 ID=cds-MCY7217701.1;Parent=gene-MK542_05915;Dbxref=NCBI_GP:MCY7217701.1;Name=MCY7217701.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911938.1;locus_tag=MK542_05915;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=MCY7217701.1;transl_table=11 JAKUZA010000033.1 Genbank gene 42157 42732 . - . ID=gene-MK542_05920;Name=MK542_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05920 JAKUZA010000033.1 Protein Homology CDS 42157 42732 . - 0 ID=cds-MCY7217702.1;Parent=gene-MK542_05920;Dbxref=NCBI_GP:MCY7217702.1;Name=MCY7217702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921990.1;locus_tag=MK542_05920;product=YutD family protein;protein_id=MCY7217702.1;transl_table=11 JAKUZA010000033.1 Genbank gene 42917 43984 . - . ID=gene-MK542_05925;Name=MK542_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05925 JAKUZA010000033.1 Protein Homology CDS 42917 43984 . - 0 ID=cds-MCY7217703.1;Parent=gene-MK542_05925;Dbxref=NCBI_GP:MCY7217703.1;Name=MCY7217703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590820.1;locus_tag=MK542_05925;product=PDZ domain-containing protein;protein_id=MCY7217703.1;transl_table=11 JAKUZA010000033.1 Genbank gene 44007 44492 . - . ID=gene-MK542_05930;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=MK542_05930 JAKUZA010000033.1 Protein Homology CDS 44007 44492 . - 0 ID=cds-MCY7217704.1;Parent=gene-MK542_05930;Dbxref=NCBI_GP:MCY7217704.1;Name=MCY7217704.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605526.1;locus_tag=MK542_05930;product=pantetheine-phosphate adenylyltransferase;protein_id=MCY7217704.1;transl_table=11 JAKUZA010000033.1 Genbank gene 44482 45021 . - . ID=gene-MK542_05935;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=MK542_05935 JAKUZA010000033.1 Protein Homology CDS 44482 45021 . - 0 ID=cds-MCY7217705.1;Parent=gene-MK542_05935;Dbxref=NCBI_GP:MCY7217705.1;Name=MCY7217705.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147838.1;locus_tag=MK542_05935;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=MCY7217705.1;transl_table=11 JAKUZA010000033.1 Genbank gene 45107 45364 . - . ID=gene-MK542_05940;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=MK542_05940 JAKUZA010000033.1 Protein Homology CDS 45107 45364 . - 0 ID=cds-MCY7217706.1;Parent=gene-MK542_05940;Dbxref=NCBI_GP:MCY7217706.1;Name=MCY7217706.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592331.1;locus_tag=MK542_05940;product=membrane protein insertion efficiency factor YidD;protein_id=MCY7217706.1;transl_table=11 JAKUZA010000033.1 Genbank gene 45364 46095 . - . ID=gene-MK542_05945;Name=MK542_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05945 JAKUZA010000033.1 Protein Homology CDS 45364 46095 . - 0 ID=cds-MCY7217707.1;Parent=gene-MK542_05945;Dbxref=NCBI_GP:MCY7217707.1;Name=MCY7217707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605529.1;locus_tag=MK542_05945;product=rRNA pseudouridine synthase;protein_id=MCY7217707.1;transl_table=11 JAKUZA010000033.1 Genbank gene 46229 46774 . - . ID=gene-MK542_05950;Name=MK542_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05950 JAKUZA010000033.1 Protein Homology CDS 46229 46774 . - 0 ID=cds-MCY7217708.1;Parent=gene-MK542_05950;Dbxref=NCBI_GP:MCY7217708.1;Name=MCY7217708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590827.1;locus_tag=MK542_05950;product=segregation/condensation protein B;protein_id=MCY7217708.1;transl_table=11 JAKUZA010000033.1 Genbank gene 46767 47477 . - . ID=gene-MK542_05955;Name=MK542_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05955 JAKUZA010000033.1 Protein Homology CDS 46767 47477 . - 0 ID=cds-MCY7217709.1;Parent=gene-MK542_05955;Dbxref=NCBI_GP:MCY7217709.1;Name=MCY7217709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190584.1;locus_tag=MK542_05955;product=segregation/condensation protein A;protein_id=MCY7217709.1;transl_table=11 JAKUZA010000033.1 Genbank gene 47480 48211 . - . ID=gene-MK542_05960;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=MK542_05960 JAKUZA010000033.1 Protein Homology CDS 47480 48211 . - 0 ID=cds-MCY7217710.1;Parent=gene-MK542_05960;Dbxref=NCBI_GP:MCY7217710.1;Name=MCY7217710.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905881.1;locus_tag=MK542_05960;product=site-specific tyrosine recombinase XerD;protein_id=MCY7217710.1;transl_table=11 JAKUZA010000033.1 Genbank gene 48208 48669 . - . ID=gene-MK542_05965;Name=MK542_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05965 JAKUZA010000033.1 Protein Homology CDS 48208 48669 . - 0 ID=cds-MCY7217711.1;Parent=gene-MK542_05965;Dbxref=NCBI_GP:MCY7217711.1;Name=MCY7217711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918470.1;locus_tag=MK542_05965;product=CBS domain-containing protein;protein_id=MCY7217711.1;transl_table=11 JAKUZA010000033.1 Genbank gene 48666 49187 . - . ID=gene-MK542_05970;Name=MK542_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05970 JAKUZA010000033.1 Protein Homology CDS 48666 49187 . - 0 ID=cds-MCY7217712.1;Parent=gene-MK542_05970;Dbxref=NCBI_GP:MCY7217712.1;Name=MCY7217712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923538.1;locus_tag=MK542_05970;product=metallophosphoesterase;protein_id=MCY7217712.1;transl_table=11 JAKUZA010000033.1 Genbank gene 49166 50140 . - . ID=gene-MK542_05975;Name=MK542_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05975 JAKUZA010000033.1 Protein Homology CDS 49166 50140 . - 0 ID=cds-MCY7217713.1;Parent=gene-MK542_05975;Dbxref=NCBI_GP:MCY7217713.1;Name=MCY7217713.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside-triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003008359.1;locus_tag=MK542_05975;product=nucleoside-triphosphate diphosphatase;protein_id=MCY7217713.1;transl_table=11 JAKUZA010000033.1 Genbank gene 50137 50931 . - . ID=gene-MK542_05980;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=MK542_05980 JAKUZA010000033.1 Protein Homology CDS 50137 50931 . - 0 ID=cds-MCY7217714.1;Parent=gene-MK542_05980;Dbxref=NCBI_GP:MCY7217714.1;Name=MCY7217714.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931399.1;locus_tag=MK542_05980;product=glutamate racemase;protein_id=MCY7217714.1;transl_table=11 JAKUZA010000033.1 Genbank gene 51034 51276 . - . ID=gene-MK542_05985;Name=MK542_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05985 JAKUZA010000033.1 Protein Homology CDS 51034 51276 . - 0 ID=cds-MCY7217715.1;Parent=gene-MK542_05985;Dbxref=NCBI_GP:MCY7217715.1;Name=MCY7217715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837361.1;locus_tag=MK542_05985;product=YneF family protein;protein_id=MCY7217715.1;transl_table=11 JAKUZA010000033.1 Genbank gene 51334 52584 . - . ID=gene-MK542_05990;Name=MK542_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05990 JAKUZA010000033.1 Protein Homology CDS 51334 52584 . - 0 ID=cds-MCY7217716.1;Parent=gene-MK542_05990;Dbxref=NCBI_GP:MCY7217716.1;Name=MCY7217716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193169.1;locus_tag=MK542_05990;product=diaminopimelate decarboxylase;protein_id=MCY7217716.1;transl_table=11 JAKUZA010000033.1 Genbank gene 52789 53472 . - . ID=gene-MK542_05995;Name=MK542_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_05995 JAKUZA010000033.1 Protein Homology CDS 52789 53472 . - 0 ID=cds-MCY7217717.1;Parent=gene-MK542_05995;Dbxref=NCBI_GP:MCY7217717.1;Name=MCY7217717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545711.1;locus_tag=MK542_05995;product=Bax inhibitor-1/YccA family protein;protein_id=MCY7217717.1;transl_table=11 JAKUZA010000033.1 Genbank gene 53492 53983 . - . ID=gene-MK542_06000;Name=MK542_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06000 JAKUZA010000033.1 Protein Homology CDS 53492 53983 . - 0 ID=cds-MCY7217718.1;Parent=gene-MK542_06000;Dbxref=NCBI_GP:MCY7217718.1;Name=MCY7217718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068154.1;locus_tag=MK542_06000;product=HD domain-containing protein;protein_id=MCY7217718.1;transl_table=11 JAKUZA010000033.1 Genbank gene 54028 54768 . - . ID=gene-MK542_06005;Name=MK542_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06005 JAKUZA010000033.1 Protein Homology CDS 54028 54768 . - 0 ID=cds-MCY7217719.1;Parent=gene-MK542_06005;Dbxref=NCBI_GP:MCY7217719.1;Name=MCY7217719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190561.1;locus_tag=MK542_06005;product=RNA methyltransferase;protein_id=MCY7217719.1;transl_table=11 JAKUZA010000033.1 Genbank gene 54909 55187 . + . ID=gene-MK542_06010;Name=MK542_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06010 JAKUZA010000033.1 Protein Homology CDS 54909 55187 . + 0 ID=cds-MCY7217720.1;Parent=gene-MK542_06010;Dbxref=NCBI_GP:MCY7217720.1;Name=MCY7217720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174612.1;locus_tag=MK542_06010;product=acylphosphatase;protein_id=MCY7217720.1;transl_table=11 JAKUZA010000033.1 Genbank gene 55269 56189 . + . ID=gene-MK542_06015;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=MK542_06015 JAKUZA010000033.1 Protein Homology CDS 55269 56189 . + 0 ID=cds-MCY7217721.1;Parent=gene-MK542_06015;Dbxref=NCBI_GP:MCY7217721.1;Name=MCY7217721.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897015.1;locus_tag=MK542_06015;product=membrane protein insertase YidC;protein_id=MCY7217721.1;transl_table=11 ##sequence-region JAKUZA010000034.1 1 25906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000034.1 Genbank region 1 25906 . + . ID=JAKUZA010000034.1:1..25906;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000034.1 Genbank gene 1 202 . + . ID=gene-MK542_06020;Name=MK542_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06020;partial=true;start_range=.,1 JAKUZA010000034.1 Protein Homology CDS 1 202 . + 1 ID=cds-MCY7217722.1;Parent=gene-MK542_06020;Dbxref=NCBI_GP:MCY7217722.1;Name=MCY7217722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_06020;partial=true;product=transposase;protein_id=MCY7217722.1;start_range=.,1;transl_table=11 JAKUZA010000034.1 Genbank gene 481 867 . - . ID=gene-MK542_06025;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=MK542_06025 JAKUZA010000034.1 Protein Homology CDS 481 867 . - 0 ID=cds-MCY7217723.1;Parent=gene-MK542_06025;Dbxref=NCBI_GP:MCY7217723.1;Name=MCY7217723.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=MK542_06025;product=50S ribosomal protein L17;protein_id=MCY7217723.1;transl_table=11 JAKUZA010000034.1 Genbank gene 879 1817 . - . ID=gene-MK542_06030;Name=MK542_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06030 JAKUZA010000034.1 Protein Homology CDS 879 1817 . - 0 ID=cds-MCY7217724.1;Parent=gene-MK542_06030;Dbxref=NCBI_GP:MCY7217724.1;Name=MCY7217724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=MK542_06030;product=DNA-directed RNA polymerase subunit alpha;protein_id=MCY7217724.1;transl_table=11 JAKUZA010000034.1 Genbank gene 1863 2246 . - . ID=gene-MK542_06035;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=MK542_06035 JAKUZA010000034.1 Protein Homology CDS 1863 2246 . - 0 ID=cds-MCY7217725.1;Parent=gene-MK542_06035;Dbxref=NCBI_GP:MCY7217725.1;Name=MCY7217725.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=MK542_06035;product=30S ribosomal protein S11;protein_id=MCY7217725.1;transl_table=11 JAKUZA010000034.1 Genbank gene 2266 2631 . - . ID=gene-MK542_06040;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=MK542_06040 JAKUZA010000034.1 Protein Homology CDS 2266 2631 . - 0 ID=cds-MCY7217726.1;Parent=gene-MK542_06040;Dbxref=NCBI_GP:MCY7217726.1;Name=MCY7217726.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=MK542_06040;product=30S ribosomal protein S13;protein_id=MCY7217726.1;transl_table=11 JAKUZA010000034.1 Genbank gene 2649 2765 . - . ID=gene-MK542_06045;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=MK542_06045 JAKUZA010000034.1 Protein Homology CDS 2649 2765 . - 0 ID=cds-MCY7217727.1;Parent=gene-MK542_06045;Dbxref=NCBI_GP:MCY7217727.1;Name=MCY7217727.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=MK542_06045;product=50S ribosomal protein L36;protein_id=MCY7217727.1;transl_table=11 JAKUZA010000034.1 Genbank gene 2790 3008 . - . ID=gene-MK542_06050;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=MK542_06050 JAKUZA010000034.1 Protein Homology CDS 2790 3008 . - 0 ID=cds-MCY7217728.1;Parent=gene-MK542_06050;Dbxref=NCBI_GP:MCY7217728.1;Name=MCY7217728.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1;locus_tag=MK542_06050;product=translation initiation factor IF-1;protein_id=MCY7217728.1;transl_table=11 JAKUZA010000034.1 Genbank gene 3124 3762 . - . ID=gene-MK542_06055;Name=MK542_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06055 JAKUZA010000034.1 Protein Homology CDS 3124 3762 . - 0 ID=cds-MCY7217729.1;Parent=gene-MK542_06055;Dbxref=NCBI_GP:MCY7217729.1;Name=MCY7217729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050429.1;locus_tag=MK542_06055;product=adenylate kinase;protein_id=MCY7217729.1;transl_table=11 JAKUZA010000034.1 Genbank gene 3859 5169 . - . ID=gene-MK542_06060;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=MK542_06060 JAKUZA010000034.1 Protein Homology CDS 3859 5169 . - 0 ID=cds-MCY7217730.1;Parent=gene-MK542_06060;Dbxref=NCBI_GP:MCY7217730.1;Name=MCY7217730.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017005.1;locus_tag=MK542_06060;product=preprotein translocase subunit SecY;protein_id=MCY7217730.1;transl_table=11 JAKUZA010000034.1 Genbank gene 5182 5622 . - . ID=gene-MK542_06065;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=MK542_06065 JAKUZA010000034.1 Protein Homology CDS 5182 5622 . - 0 ID=cds-MCY7217731.1;Parent=gene-MK542_06065;Dbxref=NCBI_GP:MCY7217731.1;Name=MCY7217731.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1;locus_tag=MK542_06065;product=50S ribosomal protein L15;protein_id=MCY7217731.1;transl_table=11 JAKUZA010000034.1 Genbank gene 5776 5958 . - . ID=gene-MK542_06070;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=MK542_06070 JAKUZA010000034.1 Protein Homology CDS 5776 5958 . - 0 ID=cds-MCY7217732.1;Parent=gene-MK542_06070;Dbxref=NCBI_GP:MCY7217732.1;Name=MCY7217732.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376783.1;locus_tag=MK542_06070;product=50S ribosomal protein L30;protein_id=MCY7217732.1;transl_table=11 JAKUZA010000034.1 Genbank gene 5972 6466 . - . ID=gene-MK542_06075;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=MK542_06075 JAKUZA010000034.1 Protein Homology CDS 5972 6466 . - 0 ID=cds-MCY7217733.1;Parent=gene-MK542_06075;Dbxref=NCBI_GP:MCY7217733.1;Name=MCY7217733.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=MK542_06075;product=30S ribosomal protein S5;protein_id=MCY7217733.1;transl_table=11 JAKUZA010000034.1 Genbank gene 6485 6841 . - . ID=gene-MK542_06080;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=MK542_06080 JAKUZA010000034.1 Protein Homology CDS 6485 6841 . - 0 ID=cds-MCY7217734.1;Parent=gene-MK542_06080;Dbxref=NCBI_GP:MCY7217734.1;Name=MCY7217734.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374469.1;locus_tag=MK542_06080;product=50S ribosomal protein L18;protein_id=MCY7217734.1;transl_table=11 JAKUZA010000034.1 Genbank gene 6927 7463 . - . ID=gene-MK542_06085;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=MK542_06085 JAKUZA010000034.1 Protein Homology CDS 6927 7463 . - 0 ID=cds-MCY7217735.1;Parent=gene-MK542_06085;Dbxref=NCBI_GP:MCY7217735.1;Name=MCY7217735.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=MK542_06085;product=50S ribosomal protein L6;protein_id=MCY7217735.1;transl_table=11 JAKUZA010000034.1 Genbank gene 7657 8055 . - . ID=gene-MK542_06090;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=MK542_06090 JAKUZA010000034.1 Protein Homology CDS 7657 8055 . - 0 ID=cds-MCY7217736.1;Parent=gene-MK542_06090;Dbxref=NCBI_GP:MCY7217736.1;Name=MCY7217736.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=MK542_06090;product=30S ribosomal protein S8;protein_id=MCY7217736.1;transl_table=11 JAKUZA010000034.1 Genbank gene 8340 8525 . - . ID=gene-MK542_06095;Name=MK542_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06095 JAKUZA010000034.1 Protein Homology CDS 8340 8525 . - 0 ID=cds-MCY7217737.1;Parent=gene-MK542_06095;Dbxref=NCBI_GP:MCY7217737.1;Name=MCY7217737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=MK542_06095;product=type Z 30S ribosomal protein S14;protein_id=MCY7217737.1;transl_table=11 JAKUZA010000034.1 Genbank gene 8543 9085 . - . ID=gene-MK542_06100;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=MK542_06100 JAKUZA010000034.1 Protein Homology CDS 8543 9085 . - 0 ID=cds-MCY7217738.1;Parent=gene-MK542_06100;Dbxref=NCBI_GP:MCY7217738.1;Name=MCY7217738.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=MK542_06100;product=50S ribosomal protein L5;protein_id=MCY7217738.1;transl_table=11 JAKUZA010000034.1 Genbank gene 9109 9414 . - . ID=gene-MK542_06105;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=MK542_06105 JAKUZA010000034.1 Protein Homology CDS 9109 9414 . - 0 ID=cds-MCY7217739.1;Parent=gene-MK542_06105;Dbxref=NCBI_GP:MCY7217739.1;Name=MCY7217739.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=MK542_06105;product=50S ribosomal protein L24;protein_id=MCY7217739.1;transl_table=11 JAKUZA010000034.1 Genbank gene 9494 9862 . - . ID=gene-MK542_06110;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=MK542_06110 JAKUZA010000034.1 Protein Homology CDS 9494 9862 . - 0 ID=cds-MCY7217740.1;Parent=gene-MK542_06110;Dbxref=NCBI_GP:MCY7217740.1;Name=MCY7217740.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=MK542_06110;product=50S ribosomal protein L14;protein_id=MCY7217740.1;transl_table=11 JAKUZA010000034.1 Genbank gene 9888 10148 . - . ID=gene-MK542_06115;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=MK542_06115 JAKUZA010000034.1 Protein Homology CDS 9888 10148 . - 0 ID=cds-MCY7217741.1;Parent=gene-MK542_06115;Dbxref=NCBI_GP:MCY7217741.1;Name=MCY7217741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=MK542_06115;product=30S ribosomal protein S17;protein_id=MCY7217741.1;transl_table=11 JAKUZA010000034.1 Genbank gene 10176 10382 . - . ID=gene-MK542_06120;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=MK542_06120 JAKUZA010000034.1 Protein Homology CDS 10176 10382 . - 0 ID=cds-MCY7217742.1;Parent=gene-MK542_06120;Dbxref=NCBI_GP:MCY7217742.1;Name=MCY7217742.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739716.1;locus_tag=MK542_06120;product=50S ribosomal protein L29;protein_id=MCY7217742.1;transl_table=11 JAKUZA010000034.1 Genbank gene 10392 10805 . - . ID=gene-MK542_06125;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=MK542_06125 JAKUZA010000034.1 Protein Homology CDS 10392 10805 . - 0 ID=cds-MCY7217743.1;Parent=gene-MK542_06125;Dbxref=NCBI_GP:MCY7217743.1;Name=MCY7217743.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=MK542_06125;product=50S ribosomal protein L16;protein_id=MCY7217743.1;transl_table=11 JAKUZA010000034.1 Genbank gene 10809 11462 . - . ID=gene-MK542_06130;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=MK542_06130 JAKUZA010000034.1 Protein Homology CDS 10809 11462 . - 0 ID=cds-MCY7217744.1;Parent=gene-MK542_06130;Dbxref=NCBI_GP:MCY7217744.1;Name=MCY7217744.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=MK542_06130;product=30S ribosomal protein S3;protein_id=MCY7217744.1;transl_table=11 JAKUZA010000034.1 Genbank gene 11475 11819 . - . ID=gene-MK542_06135;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=MK542_06135 JAKUZA010000034.1 Protein Homology CDS 11475 11819 . - 0 ID=cds-MCY7217745.1;Parent=gene-MK542_06135;Dbxref=NCBI_GP:MCY7217745.1;Name=MCY7217745.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=MK542_06135;product=50S ribosomal protein L22;protein_id=MCY7217745.1;transl_table=11 JAKUZA010000034.1 Genbank gene 11831 12112 . - . ID=gene-MK542_06140;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=MK542_06140 JAKUZA010000034.1 Protein Homology CDS 11831 12112 . - 0 ID=cds-MCY7217746.1;Parent=gene-MK542_06140;Dbxref=NCBI_GP:MCY7217746.1;Name=MCY7217746.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533767.1;locus_tag=MK542_06140;product=30S ribosomal protein S19;protein_id=MCY7217746.1;transl_table=11 JAKUZA010000034.1 Genbank gene 12199 13032 . - . ID=gene-MK542_06145;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=MK542_06145 JAKUZA010000034.1 Protein Homology CDS 12199 13032 . - 0 ID=cds-MCY7217747.1;Parent=gene-MK542_06145;Dbxref=NCBI_GP:MCY7217747.1;Name=MCY7217747.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=MK542_06145;product=50S ribosomal protein L2;protein_id=MCY7217747.1;transl_table=11 JAKUZA010000034.1 Genbank gene 13050 13349 . - . ID=gene-MK542_06150;Name=MK542_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06150 JAKUZA010000034.1 Protein Homology CDS 13050 13349 . - 0 ID=cds-MCY7217748.1;Parent=gene-MK542_06150;Dbxref=NCBI_GP:MCY7217748.1;Name=MCY7217748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=MK542_06150;product=50S ribosomal protein L23;protein_id=MCY7217748.1;transl_table=11 JAKUZA010000034.1 Genbank gene 13349 13972 . - . ID=gene-MK542_06155;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=MK542_06155 JAKUZA010000034.1 Protein Homology CDS 13349 13972 . - 0 ID=cds-MCY7217749.1;Parent=gene-MK542_06155;Dbxref=NCBI_GP:MCY7217749.1;Name=MCY7217749.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=MK542_06155;product=50S ribosomal protein L4;protein_id=MCY7217749.1;transl_table=11 JAKUZA010000034.1 Genbank gene 13997 14623 . - . ID=gene-MK542_06160;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=MK542_06160 JAKUZA010000034.1 Protein Homology CDS 13997 14623 . - 0 ID=cds-MCY7217750.1;Parent=gene-MK542_06160;Dbxref=NCBI_GP:MCY7217750.1;Name=MCY7217750.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=MK542_06160;product=50S ribosomal protein L3;protein_id=MCY7217750.1;transl_table=11 JAKUZA010000034.1 Genbank gene 14705 15013 . - . ID=gene-MK542_06165;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=MK542_06165 JAKUZA010000034.1 Protein Homology CDS 14705 15013 . - 0 ID=cds-MCY7217751.1;Parent=gene-MK542_06165;Dbxref=NCBI_GP:MCY7217751.1;Name=MCY7217751.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=MK542_06165;product=30S ribosomal protein S10;protein_id=MCY7217751.1;transl_table=11 JAKUZA010000034.1 Genbank gene 15199 15708 . - . ID=gene-MK542_06170;Name=MK542_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06170 JAKUZA010000034.1 Protein Homology CDS 15199 15708 . - 0 ID=cds-MCY7217752.1;Parent=gene-MK542_06170;Dbxref=NCBI_GP:MCY7217752.1;Name=MCY7217752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009569587.1;locus_tag=MK542_06170;product=kinase;protein_id=MCY7217752.1;transl_table=11 JAKUZA010000034.1 Genbank gene 15708 16145 . - . ID=gene-MK542_06175;Name=MK542_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06175 JAKUZA010000034.1 Protein Homology CDS 15708 16145 . - 0 ID=cds-MCY7217753.1;Parent=gene-MK542_06175;Dbxref=NCBI_GP:MCY7217753.1;Name=MCY7217753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371339.1;locus_tag=MK542_06175;product=CoA-binding protein;protein_id=MCY7217753.1;transl_table=11 JAKUZA010000034.1 Genbank gene 16334 17152 . + . ID=gene-MK542_06180;Name=MK542_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06180 JAKUZA010000034.1 Protein Homology CDS 16334 17152 . + 0 ID=cds-MCY7217754.1;Parent=gene-MK542_06180;Dbxref=NCBI_GP:MCY7217754.1;Name=MCY7217754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713119.1;locus_tag=MK542_06180;product=class C sortase;protein_id=MCY7217754.1;transl_table=11 JAKUZA010000034.1 Genbank gene 17164 18018 . + . ID=gene-MK542_06185;Name=MK542_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06185 JAKUZA010000034.1 Protein Homology CDS 17164 18018 . + 0 ID=cds-MCY7217755.1;Parent=gene-MK542_06185;Dbxref=NCBI_GP:MCY7217755.1;Name=MCY7217755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371338.1;locus_tag=MK542_06185;product=class C sortase;protein_id=MCY7217755.1;transl_table=11 JAKUZA010000034.1 Genbank gene 18015 18860 . + . ID=gene-MK542_06190;Name=MK542_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06190 JAKUZA010000034.1 Protein Homology CDS 18015 18860 . + 0 ID=cds-MCY7217756.1;Parent=gene-MK542_06190;Dbxref=NCBI_GP:MCY7217756.1;Name=MCY7217756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727545.1;locus_tag=MK542_06190;product=class C sortase;protein_id=MCY7217756.1;transl_table=11 JAKUZA010000034.1 Genbank gene 18865 19800 . - . ID=gene-MK542_06195;Name=MK542_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06195 JAKUZA010000034.1 Protein Homology CDS 18865 19800 . - 0 ID=cds-MCY7217757.1;Parent=gene-MK542_06195;Dbxref=NCBI_GP:MCY7217757.1;Name=MCY7217757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197277.1;locus_tag=MK542_06195;product=Cna B-type domain-containing protein;protein_id=MCY7217757.1;transl_table=11 JAKUZA010000034.1 Genbank pseudogene 19903 21426 . - . ID=gene-MK542_06200;Name=MK542_06200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_06200;pseudo=true JAKUZA010000034.1 Protein Homology CDS 19903 21426 . - 0 ID=cds-MK542_06200;Parent=gene-MK542_06200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029533.1;locus_tag=MK542_06200;product=SpaH/EbpB family LPXTG-anchored major pilin;pseudo=true;transl_table=11 JAKUZA010000034.1 Genbank gene 21438 23537 . - . ID=gene-MK542_06205;Name=MK542_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06205 JAKUZA010000034.1 Protein Homology CDS 21438 23537 . - 0 ID=cds-MCY7217758.1;Parent=gene-MK542_06205;Dbxref=NCBI_GP:MCY7217758.1;Name=MCY7217758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017548.2;locus_tag=MK542_06205;product=Cna B-type domain-containing protein;protein_id=MCY7217758.1;transl_table=11 JAKUZA010000034.1 Genbank gene 23513 25360 . - . ID=gene-MK542_06210;Name=MK542_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06210 JAKUZA010000034.1 GeneMarkS-2+ CDS 23513 25360 . - 0 ID=cds-MCY7217759.1;Parent=gene-MK542_06210;Dbxref=NCBI_GP:MCY7217759.1;Name=MCY7217759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06210;product=hypothetical protein;protein_id=MCY7217759.1;transl_table=11 JAKUZA010000034.1 Genbank gene 25809 25906 . + . ID=gene-MK542_06215;Name=MK542_06215;end_range=25906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06215;partial=true JAKUZA010000034.1 Protein Homology CDS 25809 25906 . + 0 ID=cds-MCY7217760.1;Parent=gene-MK542_06215;Dbxref=NCBI_GP:MCY7217760.1;Name=MCY7217760.1;end_range=25906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_053338614.1;locus_tag=MK542_06215;partial=true;product=IS481 family transposase;protein_id=MCY7217760.1;transl_table=11 ##sequence-region JAKUZA010000035.1 1 70933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000035.1 Genbank region 1 70933 . + . ID=JAKUZA010000035.1:1..70933;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000035.1 Genbank gene 160 1116 . - . ID=gene-MK542_06220;Name=MK542_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06220 JAKUZA010000035.1 Protein Homology CDS 160 1116 . - 0 ID=cds-MCY7217761.1;Parent=gene-MK542_06220;Dbxref=NCBI_GP:MCY7217761.1;Name=MCY7217761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060306.1;locus_tag=MK542_06220;product=ABC transporter permease;protein_id=MCY7217761.1;transl_table=11 JAKUZA010000035.1 Genbank gene 1118 2212 . - . ID=gene-MK542_06225;Name=MK542_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06225 JAKUZA010000035.1 Protein Homology CDS 1118 2212 . - 0 ID=cds-MCY7217762.1;Parent=gene-MK542_06225;Dbxref=NCBI_GP:MCY7217762.1;Name=MCY7217762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897686.1;locus_tag=MK542_06225;product=ABC transporter permease;protein_id=MCY7217762.1;transl_table=11 JAKUZA010000035.1 Genbank gene 2226 3740 . - . ID=gene-MK542_06230;Name=MK542_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06230 JAKUZA010000035.1 Protein Homology CDS 2226 3740 . - 0 ID=cds-MCY7217763.1;Parent=gene-MK542_06230;Dbxref=NCBI_GP:MCY7217763.1;Name=MCY7217763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604785.1;locus_tag=MK542_06230;product=ABC transporter ATP-binding protein;protein_id=MCY7217763.1;transl_table=11 JAKUZA010000035.1 Genbank gene 3877 4932 . - . ID=gene-MK542_06235;Name=MK542_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06235 JAKUZA010000035.1 Protein Homology CDS 3877 4932 . - 0 ID=cds-MCY7217764.1;Parent=gene-MK542_06235;Dbxref=NCBI_GP:MCY7217764.1;Name=MCY7217764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930280.1;locus_tag=MK542_06235;product=BMP family protein;protein_id=MCY7217764.1;transl_table=11 JAKUZA010000035.1 Genbank gene 5004 5393 . - . ID=gene-MK542_06240;Name=MK542_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06240 JAKUZA010000035.1 Protein Homology CDS 5004 5393 . - 0 ID=cds-MCY7217765.1;Parent=gene-MK542_06240;Dbxref=NCBI_GP:MCY7217765.1;Name=MCY7217765.1;Ontology_term=GO:0009972,GO:0004126;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596010.1;locus_tag=MK542_06240;product=cytidine deaminase;protein_id=MCY7217765.1;transl_table=11 JAKUZA010000035.1 Genbank gene 5380 6042 . - . ID=gene-MK542_06245;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=MK542_06245 JAKUZA010000035.1 Protein Homology CDS 5380 6042 . - 0 ID=cds-MCY7217766.1;Parent=gene-MK542_06245;Dbxref=NCBI_GP:MCY7217766.1;Name=MCY7217766.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836882.1;locus_tag=MK542_06245;product=deoxyribose-phosphate aldolase;protein_id=MCY7217766.1;transl_table=11 JAKUZA010000035.1 Genbank gene 6060 7337 . - . ID=gene-MK542_06250;Name=MK542_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06250 JAKUZA010000035.1 Protein Homology CDS 6060 7337 . - 0 ID=cds-MCY7217767.1;Parent=gene-MK542_06250;Dbxref=NCBI_GP:MCY7217767.1;Name=MCY7217767.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543466.1;locus_tag=MK542_06250;product=pyrimidine-nucleoside phosphorylase;protein_id=MCY7217767.1;transl_table=11 JAKUZA010000035.1 Genbank gene 7340 7927 . - . ID=gene-MK542_06255;Name=MK542_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06255 JAKUZA010000035.1 Protein Homology CDS 7340 7927 . - 0 ID=cds-MCY7217768.1;Parent=gene-MK542_06255;Dbxref=NCBI_GP:MCY7217768.1;Name=MCY7217768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906689.1;locus_tag=MK542_06255;product=class I SAM-dependent methyltransferase;protein_id=MCY7217768.1;transl_table=11 JAKUZA010000035.1 Genbank gene 8021 8941 . + . ID=gene-MK542_06260;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=MK542_06260 JAKUZA010000035.1 Protein Homology CDS 8021 8941 . + 0 ID=cds-MCY7217769.1;Parent=gene-MK542_06260;Dbxref=NCBI_GP:MCY7217769.1;Name=MCY7217769.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261526.1;locus_tag=MK542_06260;product=type I pantothenate kinase;protein_id=MCY7217769.1;transl_table=11 JAKUZA010000035.1 Genbank gene 9012 9248 . + . ID=gene-MK542_06265;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=MK542_06265 JAKUZA010000035.1 Protein Homology CDS 9012 9248 . + 0 ID=cds-MCY7217770.1;Parent=gene-MK542_06265;Dbxref=NCBI_GP:MCY7217770.1;Name=MCY7217770.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274003.1;locus_tag=MK542_06265;product=30S ribosomal protein S20;protein_id=MCY7217770.1;transl_table=11 JAKUZA010000035.1 Genbank gene 9317 9829 . + . ID=gene-MK542_06270;Name=MK542_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06270 JAKUZA010000035.1 Protein Homology CDS 9317 9829 . + 0 ID=cds-MCY7217771.1;Parent=gene-MK542_06270;Dbxref=NCBI_GP:MCY7217771.1;Name=MCY7217771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003007642.1;locus_tag=MK542_06270;product=DNA topology modulation protein;protein_id=MCY7217771.1;transl_table=11 JAKUZA010000035.1 Genbank gene 9850 10578 . - . ID=gene-MK542_06275;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=MK542_06275 JAKUZA010000035.1 Protein Homology CDS 9850 10578 . - 0 ID=cds-MCY7217772.1;Parent=gene-MK542_06275;Dbxref=NCBI_GP:MCY7217772.1;Name=MCY7217772.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590133.1;locus_tag=MK542_06275;product=peroxide stress protein YaaA;protein_id=MCY7217772.1;transl_table=11 JAKUZA010000035.1 Genbank gene 10735 11196 . + . ID=gene-MK542_06280;Name=MK542_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06280 JAKUZA010000035.1 Protein Homology CDS 10735 11196 . + 0 ID=cds-MCY7217773.1;Parent=gene-MK542_06280;Dbxref=NCBI_GP:MCY7217773.1;Name=MCY7217773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903062.1;locus_tag=MK542_06280;product=DUF1836 domain-containing protein;protein_id=MCY7217773.1;transl_table=11 JAKUZA010000035.1 Genbank gene 11180 11827 . + . ID=gene-MK542_06285;Name=MK542_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06285 JAKUZA010000035.1 Protein Homology CDS 11180 11827 . + 0 ID=cds-MCY7217774.1;Parent=gene-MK542_06285;Dbxref=NCBI_GP:MCY7217774.1;Name=MCY7217774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014710.1;locus_tag=MK542_06285;product=hemolysin III family protein;protein_id=MCY7217774.1;transl_table=11 JAKUZA010000035.1 Genbank gene 12011 12844 . - . ID=gene-MK542_06290;Name=MK542_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06290 JAKUZA010000035.1 Protein Homology CDS 12011 12844 . - 0 ID=cds-MCY7217775.1;Parent=gene-MK542_06290;Dbxref=NCBI_GP:MCY7217775.1;Name=MCY7217775.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.2;locus_tag=MK542_06290;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCY7217775.1;transl_table=11 JAKUZA010000035.1 Genbank gene 13112 13756 . - . ID=gene-MK542_06295;Name=MK542_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06295 JAKUZA010000035.1 Protein Homology CDS 13112 13756 . - 0 ID=cds-MCY7217776.1;Parent=gene-MK542_06295;Dbxref=NCBI_GP:MCY7217776.1;Name=MCY7217776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166861.1;locus_tag=MK542_06295;product=recombinase family protein;protein_id=MCY7217776.1;transl_table=11 JAKUZA010000035.1 Genbank pseudogene 13887 14267 . - . ID=gene-MK542_06300;Name=MK542_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_06300;pseudo=true JAKUZA010000035.1 Protein Homology CDS 13887 14267 . - 0 ID=cds-MK542_06300;Parent=gene-MK542_06300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013990933.1;locus_tag=MK542_06300;product=recombinase family protein;pseudo=true;transl_table=11 JAKUZA010000035.1 Genbank gene 14441 16078 . - . ID=gene-MK542_06305;Name=MK542_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06305 JAKUZA010000035.1 Protein Homology CDS 14441 16078 . - 0 ID=cds-MCY7217777.1;Parent=gene-MK542_06305;Dbxref=NCBI_GP:MCY7217777.1;Name=MCY7217777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902826.1;locus_tag=MK542_06305;product=hypothetical protein;protein_id=MCY7217777.1;transl_table=11 JAKUZA010000035.1 Genbank gene 16068 16811 . - . ID=gene-MK542_06310;Name=MK542_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06310 JAKUZA010000035.1 Protein Homology CDS 16068 16811 . - 0 ID=cds-MCY7217778.1;Parent=gene-MK542_06310;Dbxref=NCBI_GP:MCY7217778.1;Name=MCY7217778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590128.1;locus_tag=MK542_06310;product=ABC transporter ATP-binding protein;protein_id=MCY7217778.1;transl_table=11 JAKUZA010000035.1 Genbank gene 16922 18535 . - . ID=gene-MK542_06315;Name=MK542_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06315 JAKUZA010000035.1 Protein Homology CDS 16922 18535 . - 0 ID=cds-MCY7217779.1;Parent=gene-MK542_06315;Dbxref=NCBI_GP:MCY7217779.1;Name=MCY7217779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590127.1;locus_tag=MK542_06315;product=M20/M25/M40 family metallo-hydrolase;protein_id=MCY7217779.1;transl_table=11 JAKUZA010000035.1 Genbank gene 18671 21643 . - . ID=gene-MK542_06320;Name=MK542_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06320 JAKUZA010000035.1 Protein Homology CDS 18671 21643 . - 0 ID=cds-MCY7217780.1;Parent=gene-MK542_06320;Dbxref=NCBI_GP:MCY7217780.1;Name=MCY7217780.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912311.1;locus_tag=MK542_06320;product=prolyl oligopeptidase family serine peptidase;protein_id=MCY7217780.1;transl_table=11 JAKUZA010000035.1 Genbank gene 21839 23287 . + . ID=gene-MK542_06325;Name=MK542_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06325 JAKUZA010000035.1 Protein Homology CDS 21839 23287 . + 0 ID=cds-MCY7217781.1;Parent=gene-MK542_06325;Dbxref=NCBI_GP:MCY7217781.1;Name=MCY7217781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660422.1;locus_tag=MK542_06325;product=alpha-amylase;protein_id=MCY7217781.1;transl_table=11 JAKUZA010000035.1 Genbank gene 23361 24200 . - . ID=gene-MK542_06330;Name=MK542_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06330 JAKUZA010000035.1 Protein Homology CDS 23361 24200 . - 0 ID=cds-MCY7217782.1;Parent=gene-MK542_06330;Dbxref=NCBI_GP:MCY7217782.1;Name=MCY7217782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000370.1;locus_tag=MK542_06330;product=alpha/beta hydrolase;protein_id=MCY7217782.1;transl_table=11 JAKUZA010000035.1 Genbank gene 24440 25477 . - . ID=gene-MK542_06335;Name=MK542_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06335 JAKUZA010000035.1 Protein Homology CDS 24440 25477 . - 0 ID=cds-MCY7217783.1;Parent=gene-MK542_06335;Dbxref=NCBI_GP:MCY7217783.1;Name=MCY7217783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604767.1;locus_tag=MK542_06335;product=M42 family metallopeptidase;protein_id=MCY7217783.1;transl_table=11 JAKUZA010000035.1 Genbank gene 25564 26709 . - . ID=gene-MK542_06340;Name=MK542_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06340 JAKUZA010000035.1 Protein Homology CDS 25564 26709 . - 0 ID=cds-MCY7217784.1;Parent=gene-MK542_06340;Dbxref=NCBI_GP:MCY7217784.1;Name=MCY7217784.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906711.1;locus_tag=MK542_06340;product=FtsX-like permease family protein;protein_id=MCY7217784.1;transl_table=11 JAKUZA010000035.1 Genbank gene 26713 27393 . - . ID=gene-MK542_06345;Name=MK542_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06345 JAKUZA010000035.1 Protein Homology CDS 26713 27393 . - 0 ID=cds-MCY7217785.1;Parent=gene-MK542_06345;Dbxref=NCBI_GP:MCY7217785.1;Name=MCY7217785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713584.1;locus_tag=MK542_06345;product=ABC transporter ATP-binding protein;protein_id=MCY7217785.1;transl_table=11 JAKUZA010000035.1 Genbank gene 27386 27967 . - . ID=gene-MK542_06350;Name=MK542_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06350 JAKUZA010000035.1 Protein Homology CDS 27386 27967 . - 0 ID=cds-MCY7217786.1;Parent=gene-MK542_06350;Dbxref=NCBI_GP:MCY7217786.1;Name=MCY7217786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000366.1;locus_tag=MK542_06350;product=TetR family transcriptional regulator;protein_id=MCY7217786.1;transl_table=11 JAKUZA010000035.1 Genbank gene 28081 29082 . - . ID=gene-MK542_06355;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=MK542_06355 JAKUZA010000035.1 Protein Homology CDS 28081 29082 . - 0 ID=cds-MCY7217787.1;Parent=gene-MK542_06355;Dbxref=NCBI_GP:MCY7217787.1;Name=MCY7217787.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930233.1;locus_tag=MK542_06355;product=UDP-glucose 4-epimerase GalE;protein_id=MCY7217787.1;transl_table=11 JAKUZA010000035.1 Genbank gene 29128 30609 . - . ID=gene-MK542_06360;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=MK542_06360 JAKUZA010000035.1 Protein Homology CDS 29128 30609 . - 0 ID=cds-MCY7217788.1;Parent=gene-MK542_06360;Dbxref=NCBI_GP:MCY7217788.1;Name=MCY7217788.1;Ontology_term=GO:0019388,GO:0017103;gbkey=CDS;gene=galT;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660376.1;locus_tag=MK542_06360;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=MCY7217788.1;transl_table=11 JAKUZA010000035.1 Genbank gene 30684 31862 . - . ID=gene-MK542_06365;Name=MK542_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06365 JAKUZA010000035.1 Protein Homology CDS 30684 31862 . - 0 ID=cds-MCY7217789.1;Parent=gene-MK542_06365;Dbxref=NCBI_GP:MCY7217789.1;Name=MCY7217789.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604871.1;locus_tag=MK542_06365;product=galactokinase;protein_id=MCY7217789.1;transl_table=11 JAKUZA010000035.1 Genbank gene 32039 33175 . - . ID=gene-MK542_06370;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=MK542_06370 JAKUZA010000035.1 Protein Homology CDS 32039 33175 . - 0 ID=cds-MCY7217790.1;Parent=gene-MK542_06370;Dbxref=NCBI_GP:MCY7217790.1;Name=MCY7217790.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010064.1;locus_tag=MK542_06370;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MCY7217790.1;transl_table=11 JAKUZA010000035.1 Genbank gene 33197 34642 . - . ID=gene-MK542_06375;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=MK542_06375 JAKUZA010000035.1 Protein Homology CDS 33197 34642 . - 0 ID=cds-MCY7217791.1;Parent=gene-MK542_06375;Dbxref=NCBI_GP:MCY7217791.1;Name=MCY7217791.1;Ontology_term=GO:0005975,GO:0004645;gbkey=CDS;gene=gtfA;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904354.1;locus_tag=MK542_06375;product=sucrose phosphorylase;protein_id=MCY7217791.1;transl_table=11 JAKUZA010000035.1 Genbank gene 34860 35693 . - . ID=gene-MK542_06380;Name=MK542_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06380 JAKUZA010000035.1 Protein Homology CDS 34860 35693 . - 0 ID=cds-MCY7217792.1;Parent=gene-MK542_06380;Dbxref=NCBI_GP:MCY7217792.1;Name=MCY7217792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711263.1;locus_tag=MK542_06380;product=carbohydrate ABC transporter permease;protein_id=MCY7217792.1;transl_table=11 JAKUZA010000035.1 Genbank gene 35707 36573 . - . ID=gene-MK542_06385;Name=MK542_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06385 JAKUZA010000035.1 Protein Homology CDS 35707 36573 . - 0 ID=cds-MCY7217793.1;Parent=gene-MK542_06385;Dbxref=NCBI_GP:MCY7217793.1;Name=MCY7217793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757171.1;locus_tag=MK542_06385;product=sugar ABC transporter permease;protein_id=MCY7217793.1;transl_table=11 JAKUZA010000035.1 Genbank gene 36587 37846 . - . ID=gene-MK542_06390;Name=MK542_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06390 JAKUZA010000035.1 Protein Homology CDS 36587 37846 . - 0 ID=cds-MCY7217794.1;Parent=gene-MK542_06390;Dbxref=NCBI_GP:MCY7217794.1;Name=MCY7217794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262872.1;locus_tag=MK542_06390;product=extracellular solute-binding protein;protein_id=MCY7217794.1;transl_table=11 JAKUZA010000035.1 Genbank gene 37859 40021 . - . ID=gene-MK542_06395;Name=MK542_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06395 JAKUZA010000035.1 Protein Homology CDS 37859 40021 . - 0 ID=cds-MCY7217795.1;Parent=gene-MK542_06395;Dbxref=NCBI_GP:MCY7217795.1;Name=MCY7217795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836856.1;locus_tag=MK542_06395;product=alpha-galactosidase;protein_id=MCY7217795.1;transl_table=11 JAKUZA010000035.1 Genbank gene 40161 40994 . + . ID=gene-MK542_06400;Name=MK542_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06400 JAKUZA010000035.1 Protein Homology CDS 40161 40994 . + 0 ID=cds-MCY7217796.1;Parent=gene-MK542_06400;Dbxref=NCBI_GP:MCY7217796.1;Name=MCY7217796.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031194.1;locus_tag=MK542_06400;product=AraC family ligand binding domain-containing protein;protein_id=MCY7217796.1;transl_table=11 JAKUZA010000035.1 Genbank gene 41077 42078 . + . ID=gene-MK542_06405;Name=MK542_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06405 JAKUZA010000035.1 Protein Homology CDS 41077 42078 . + 0 ID=cds-MCY7217797.1;Parent=gene-MK542_06405;Dbxref=NCBI_GP:MCY7217797.1;Name=MCY7217797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836854.1;locus_tag=MK542_06405;product=LacI family DNA-binding transcriptional regulator;protein_id=MCY7217797.1;transl_table=11 JAKUZA010000035.1 Genbank gene 42093 43028 . + . ID=gene-MK542_06410;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=MK542_06410 JAKUZA010000035.1 Protein Homology CDS 42093 43028 . + 0 ID=cds-MCY7217798.1;Parent=gene-MK542_06410;Dbxref=NCBI_GP:MCY7217798.1;Name=MCY7217798.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906729.1;locus_tag=MK542_06410;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=MCY7217798.1;transl_table=11 JAKUZA010000035.1 Genbank gene 43136 43327 . - . ID=gene-MK542_06415;Name=MK542_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06415 JAKUZA010000035.1 Protein Homology CDS 43136 43327 . - 0 ID=cds-MCY7217799.1;Parent=gene-MK542_06415;Dbxref=NCBI_GP:MCY7217799.1;Name=MCY7217799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906730.1;locus_tag=MK542_06415;product=DUF3272 domain-containing protein;protein_id=MCY7217799.1;transl_table=11 JAKUZA010000035.1 Genbank gene 43441 44601 . - . ID=gene-MK542_06420;Name=MK542_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06420 JAKUZA010000035.1 Protein Homology CDS 43441 44601 . - 0 ID=cds-MCY7217800.1;Parent=gene-MK542_06420;Dbxref=NCBI_GP:MCY7217800.1;Name=MCY7217800.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.2;locus_tag=MK542_06420;product=AAA family ATPase;protein_id=MCY7217800.1;transl_table=11 JAKUZA010000035.1 Genbank gene 44598 45683 . - . ID=gene-MK542_06425;Name=MK542_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06425 JAKUZA010000035.1 GeneMarkS-2+ CDS 44598 45683 . - 0 ID=cds-MCY7217801.1;Parent=gene-MK542_06425;Dbxref=NCBI_GP:MCY7217801.1;Name=MCY7217801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06425;product=hypothetical protein;protein_id=MCY7217801.1;transl_table=11 JAKUZA010000035.1 Genbank gene 45906 47570 . - . ID=gene-MK542_06430;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=MK542_06430 JAKUZA010000035.1 Protein Homology CDS 45906 47570 . - 0 ID=cds-MCY7217802.1;Parent=gene-MK542_06430;Dbxref=NCBI_GP:MCY7217802.1;Name=MCY7217802.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895702.1;locus_tag=MK542_06430;product=DNA polymerase III subunit gamma/tau;protein_id=MCY7217802.1;transl_table=11 JAKUZA010000035.1 Genbank gene 47570 48067 . - . ID=gene-MK542_06435;Name=MK542_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06435 JAKUZA010000035.1 Protein Homology CDS 47570 48067 . - 0 ID=cds-MCY7217803.1;Parent=gene-MK542_06435;Dbxref=NCBI_GP:MCY7217803.1;Name=MCY7217803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808895.1;locus_tag=MK542_06435;product=GAF domain-containing protein;protein_id=MCY7217803.1;transl_table=11 JAKUZA010000035.1 Genbank gene 48097 48930 . - . ID=gene-MK542_06440;Name=MK542_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06440 JAKUZA010000035.1 Protein Homology CDS 48097 48930 . - 0 ID=cds-MCY7217804.1;Parent=gene-MK542_06440;Dbxref=NCBI_GP:MCY7217804.1;Name=MCY7217804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900524.1;locus_tag=MK542_06440;product=alpha/beta hydrolase;protein_id=MCY7217804.1;transl_table=11 JAKUZA010000035.1 Genbank gene 48927 49571 . - . ID=gene-MK542_06445;Name=MK542_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06445 JAKUZA010000035.1 Protein Homology CDS 48927 49571 . - 0 ID=cds-MCY7217805.1;Parent=gene-MK542_06445;Dbxref=NCBI_GP:MCY7217805.1;Name=MCY7217805.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906735.1;locus_tag=MK542_06445;product=Type 1 glutamine amidotransferase-like domain-containing protein;protein_id=MCY7217805.1;transl_table=11 JAKUZA010000035.1 Genbank gene 49733 50317 . - . ID=gene-MK542_06450;Name=MK542_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06450 JAKUZA010000035.1 Protein Homology CDS 49733 50317 . - 0 ID=cds-MCY7217806.1;Parent=gene-MK542_06450;Dbxref=NCBI_GP:MCY7217806.1;Name=MCY7217806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906432.1;locus_tag=MK542_06450;product=uracil-DNA glycosylase family protein;protein_id=MCY7217806.1;transl_table=11 JAKUZA010000035.1 Genbank gene 50370 51776 . - . ID=gene-MK542_06455;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=MK542_06455 JAKUZA010000035.1 Protein Homology CDS 50370 51776 . - 0 ID=cds-MCY7217807.1;Parent=gene-MK542_06455;Dbxref=NCBI_GP:MCY7217807.1;Name=MCY7217807.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pepV;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906431.1;locus_tag=MK542_06455;product=dipeptidase PepV;protein_id=MCY7217807.1;transl_table=11 JAKUZA010000035.1 Genbank gene 51856 52461 . - . ID=gene-MK542_06460;Name=MK542_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06460 JAKUZA010000035.1 Protein Homology CDS 51856 52461 . - 0 ID=cds-MCY7217808.1;Parent=gene-MK542_06460;Dbxref=NCBI_GP:MCY7217808.1;Name=MCY7217808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924506.1;locus_tag=MK542_06460;product=nitroreductase family protein;protein_id=MCY7217808.1;transl_table=11 JAKUZA010000035.1 Genbank gene 52726 53271 . - . ID=gene-MK542_06465;Name=MK542_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06465 JAKUZA010000035.1 Protein Homology CDS 52726 53271 . - 0 ID=cds-MCY7217809.1;Parent=gene-MK542_06465;Dbxref=NCBI_GP:MCY7217809.1;Name=MCY7217809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720913.1;locus_tag=MK542_06465;product=hypothetical protein;protein_id=MCY7217809.1;transl_table=11 JAKUZA010000035.1 Genbank gene 53567 54406 . - . ID=gene-MK542_06470;Name=MK542_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06470 JAKUZA010000035.1 Protein Homology CDS 53567 54406 . - 0 ID=cds-MCY7217810.1;Parent=gene-MK542_06470;Dbxref=NCBI_GP:MCY7217810.1;Name=MCY7217810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015777.1;locus_tag=MK542_06470;product=metallophosphatase family protein;protein_id=MCY7217810.1;transl_table=11 JAKUZA010000035.1 Genbank gene 54473 56140 . - . ID=gene-MK542_06475;Name=MK542_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06475 JAKUZA010000035.1 Protein Homology CDS 54473 56140 . - 0 ID=cds-MCY7217811.1;Parent=gene-MK542_06475;Dbxref=NCBI_GP:MCY7217811.1;Name=MCY7217811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=MK542_06475;product=ATP-binding protein;protein_id=MCY7217811.1;transl_table=11 JAKUZA010000035.1 Genbank gene 56137 57555 . - . ID=gene-MK542_06480;Name=MK542_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06480 JAKUZA010000035.1 GeneMarkS-2+ CDS 56137 57555 . - 0 ID=cds-MCY7217812.1;Parent=gene-MK542_06480;Dbxref=NCBI_GP:MCY7217812.1;Name=MCY7217812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06480;product=hypothetical protein;protein_id=MCY7217812.1;transl_table=11 JAKUZA010000035.1 Genbank gene 57629 59458 . - . ID=gene-MK542_06485;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=MK542_06485 JAKUZA010000035.1 Protein Homology CDS 57629 59458 . - 0 ID=cds-MCY7217813.1;Parent=gene-MK542_06485;Dbxref=NCBI_GP:MCY7217813.1;Name=MCY7217813.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903014.1;locus_tag=MK542_06485;product=excinuclease ABC subunit UvrC;protein_id=MCY7217813.1;transl_table=11 JAKUZA010000035.1 Genbank gene 59678 60724 . - . ID=gene-MK542_06490;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=MK542_06490 JAKUZA010000035.1 Protein Homology CDS 59678 60724 . - 0 ID=cds-MCY7217814.1;Parent=gene-MK542_06490;Dbxref=NCBI_GP:MCY7217814.1;Name=MCY7217814.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884100.1;locus_tag=MK542_06490;product=dTDP-glucose 4%2C6-dehydratase;protein_id=MCY7217814.1;transl_table=11 JAKUZA010000035.1 Genbank gene 60966 61559 . - . ID=gene-MK542_06495;Name=MK542_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06495 JAKUZA010000035.1 Protein Homology CDS 60966 61559 . - 0 ID=cds-MCY7217815.1;Parent=gene-MK542_06495;Dbxref=NCBI_GP:MCY7217815.1;Name=MCY7217815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018379055.1;locus_tag=MK542_06495;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=MCY7217815.1;transl_table=11 JAKUZA010000035.1 Genbank gene 61564 62433 . - . ID=gene-MK542_06500;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=MK542_06500 JAKUZA010000035.1 Protein Homology CDS 61564 62433 . - 0 ID=cds-MCY7217816.1;Parent=gene-MK542_06500;Dbxref=NCBI_GP:MCY7217816.1;Name=MCY7217816.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676146.1;locus_tag=MK542_06500;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=MCY7217816.1;transl_table=11 JAKUZA010000035.1 Genbank gene 62579 63403 . - . ID=gene-MK542_06505;Name=MK542_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06505 JAKUZA010000035.1 Protein Homology CDS 62579 63403 . - 0 ID=cds-MCY7217817.1;Parent=gene-MK542_06505;Dbxref=NCBI_GP:MCY7217817.1;Name=MCY7217817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659387.1;locus_tag=MK542_06505;product=ZIP family metal transporter;protein_id=MCY7217817.1;transl_table=11 JAKUZA010000035.1 Genbank gene 63426 63896 . - . ID=gene-MK542_06510;Name=MK542_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06510 JAKUZA010000035.1 Protein Homology CDS 63426 63896 . - 0 ID=cds-MCY7217818.1;Parent=gene-MK542_06510;Dbxref=NCBI_GP:MCY7217818.1;Name=MCY7217818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920900.1;locus_tag=MK542_06510;product=8-oxo-dGTP diphosphatase;protein_id=MCY7217818.1;transl_table=11 JAKUZA010000035.1 Genbank gene 63898 64992 . - . ID=gene-MK542_06515;Name=MK542_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06515 JAKUZA010000035.1 Protein Homology CDS 63898 64992 . - 0 ID=cds-MCY7217819.1;Parent=gene-MK542_06515;Dbxref=NCBI_GP:MCY7217819.1;Name=MCY7217819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897347.1;locus_tag=MK542_06515;product=FAD-binding oxidoreductase;protein_id=MCY7217819.1;transl_table=11 JAKUZA010000035.1 Genbank gene 65004 65801 . - . ID=gene-MK542_06520;Name=MK542_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06520 JAKUZA010000035.1 Protein Homology CDS 65004 65801 . - 0 ID=cds-MCY7217820.1;Parent=gene-MK542_06520;Dbxref=NCBI_GP:MCY7217820.1;Name=MCY7217820.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659428.1;locus_tag=MK542_06520;product=Nif3-like dinuclear metal center hexameric protein;protein_id=MCY7217820.1;transl_table=11 JAKUZA010000035.1 Genbank gene 65788 66477 . - . ID=gene-MK542_06525;Name=MK542_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06525 JAKUZA010000035.1 Protein Homology CDS 65788 66477 . - 0 ID=cds-MCY7217821.1;Parent=gene-MK542_06525;Dbxref=NCBI_GP:MCY7217821.1;Name=MCY7217821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659369.1;locus_tag=MK542_06525;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=MCY7217821.1;transl_table=11 JAKUZA010000035.1 Genbank gene 66731 68035 . - . ID=gene-MK542_06530;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=MK542_06530 JAKUZA010000035.1 Protein Homology CDS 66731 68035 . - 0 ID=cds-MCY7217822.1;Parent=gene-MK542_06530;Dbxref=NCBI_GP:MCY7217822.1;Name=MCY7217822.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=MK542_06530;product=phosphopyruvate hydratase;protein_id=MCY7217822.1;transl_table=11 JAKUZA010000035.1 Genbank gene 68227 68685 . + . ID=gene-MK542_06535;Name=MK542_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06535 JAKUZA010000035.1 Protein Homology CDS 68227 68685 . + 0 ID=cds-MCY7217823.1;Parent=gene-MK542_06535;Dbxref=NCBI_GP:MCY7217823.1;Name=MCY7217823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604659.1;locus_tag=MK542_06535;product=DUF1694 domain-containing protein;protein_id=MCY7217823.1;transl_table=11 JAKUZA010000035.1 Genbank gene 68682 69020 . + . ID=gene-MK542_06540;Name=MK542_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06540 JAKUZA010000035.1 Protein Homology CDS 68682 69020 . + 0 ID=cds-MCY7217824.1;Parent=gene-MK542_06540;Dbxref=NCBI_GP:MCY7217824.1;Name=MCY7217824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912179.1;locus_tag=MK542_06540;product=nuclear transport factor 2 family protein;protein_id=MCY7217824.1;transl_table=11 JAKUZA010000035.1 Genbank gene 69017 70138 . - . ID=gene-MK542_06545;Name=MK542_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06545 JAKUZA010000035.1 Protein Homology CDS 69017 70138 . - 0 ID=cds-MCY7217825.1;Parent=gene-MK542_06545;Dbxref=NCBI_GP:MCY7217825.1;Name=MCY7217825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660582.1;locus_tag=MK542_06545;product=glycerate kinase;protein_id=MCY7217825.1;transl_table=11 JAKUZA010000035.1 Genbank gene 70147 70794 . - . ID=gene-MK542_06550;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=MK542_06550 JAKUZA010000035.1 Protein Homology CDS 70147 70794 . - 0 ID=cds-MCY7217826.1;Parent=gene-MK542_06550;Dbxref=NCBI_GP:MCY7217826.1;Name=MCY7217826.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910056.1;locus_tag=MK542_06550;product=phosphoserine phosphatase SerB;protein_id=MCY7217826.1;transl_table=11 ##sequence-region JAKUZA010000036.1 1 24269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000036.1 Genbank region 1 24269 . + . ID=JAKUZA010000036.1:1..24269;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000036.1 Genbank pseudogene 1 193 . - . ID=gene-MK542_06555;Name=MK542_06555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_06555;pseudo=true JAKUZA010000036.1 Protein Homology CDS 1 193 . - 0 ID=cds-MK542_06555;Parent=gene-MK542_06555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_06555;product=ISL3 family transposase;pseudo=true;transl_table=11 JAKUZA010000036.1 Genbank gene 256 1392 . + . ID=gene-MK542_06560;Name=MK542_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06560 JAKUZA010000036.1 Protein Homology CDS 256 1392 . + 0 ID=cds-MCY7217827.1;Parent=gene-MK542_06560;Dbxref=NCBI_GP:MCY7217827.1;Name=MCY7217827.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591804.1;locus_tag=MK542_06560;product=amidohydrolase;protein_id=MCY7217827.1;transl_table=11 JAKUZA010000036.1 Genbank gene 1597 2430 . + . ID=gene-MK542_06565;Name=MK542_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06565 JAKUZA010000036.1 Protein Homology CDS 1597 2430 . + 0 ID=cds-MCY7217828.1;Parent=gene-MK542_06565;Dbxref=NCBI_GP:MCY7217828.1;Name=MCY7217828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659877.1;locus_tag=MK542_06565;product=amino acid ABC transporter substrate-binding protein;protein_id=MCY7217828.1;transl_table=11 JAKUZA010000036.1 Genbank gene 2517 3380 . + . ID=gene-MK542_06570;Name=MK542_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06570 JAKUZA010000036.1 Protein Homology CDS 2517 3380 . + 0 ID=cds-MCY7217829.1;Parent=gene-MK542_06570;Dbxref=NCBI_GP:MCY7217829.1;Name=MCY7217829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543698.1;locus_tag=MK542_06570;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=MCY7217829.1;transl_table=11 JAKUZA010000036.1 Genbank gene 3587 4963 . + . ID=gene-MK542_06575;Name=MK542_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06575 JAKUZA010000036.1 Protein Homology CDS 3587 4963 . + 0 ID=cds-MCY7217830.1;Parent=gene-MK542_06575;Dbxref=NCBI_GP:MCY7217830.1;Name=MCY7217830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591807.1;locus_tag=MK542_06575;product=M20/M25/M40 family metallo-hydrolase;protein_id=MCY7217830.1;transl_table=11 JAKUZA010000036.1 Genbank gene 4953 6017 . + . ID=gene-MK542_06580;Name=MK542_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06580 JAKUZA010000036.1 Protein Homology CDS 4953 6017 . + 0 ID=cds-MCY7217831.1;Parent=gene-MK542_06580;Dbxref=NCBI_GP:MCY7217831.1;Name=MCY7217831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605668.1;locus_tag=MK542_06580;product=methionine ABC transporter ATP-binding protein;protein_id=MCY7217831.1;transl_table=11 JAKUZA010000036.1 Genbank gene 6019 6711 . + . ID=gene-MK542_06585;Name=MK542_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06585 JAKUZA010000036.1 Protein Homology CDS 6019 6711 . + 0 ID=cds-MCY7217832.1;Parent=gene-MK542_06585;Dbxref=NCBI_GP:MCY7217832.1;Name=MCY7217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255001.1;locus_tag=MK542_06585;product=ABC transporter permease;protein_id=MCY7217832.1;transl_table=11 JAKUZA010000036.1 Genbank gene 7037 8800 . + . ID=gene-MK542_06590;Name=MK542_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06590 JAKUZA010000036.1 Protein Homology CDS 7037 8800 . + 0 ID=cds-MCY7217833.1;Parent=gene-MK542_06590;Dbxref=NCBI_GP:MCY7217833.1;Name=MCY7217833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941225.1;locus_tag=MK542_06590;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7217833.1;transl_table=11 JAKUZA010000036.1 Genbank gene 8790 10457 . + . ID=gene-MK542_06595;Name=MK542_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06595 JAKUZA010000036.1 Protein Homology CDS 8790 10457 . + 0 ID=cds-MCY7217834.1;Parent=gene-MK542_06595;Dbxref=NCBI_GP:MCY7217834.1;Name=MCY7217834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039192.1;locus_tag=MK542_06595;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7217834.1;transl_table=11 JAKUZA010000036.1 Genbank gene 10458 11051 . + . ID=gene-MK542_06600;Name=MK542_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06600 JAKUZA010000036.1 Protein Homology CDS 10458 11051 . + 0 ID=cds-MCY7217835.1;Parent=gene-MK542_06600;Dbxref=NCBI_GP:MCY7217835.1;Name=MCY7217835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014635664.1;locus_tag=MK542_06600;product=MptD family putative ECF transporter S component;protein_id=MCY7217835.1;transl_table=11 JAKUZA010000036.1 Genbank gene 11186 11728 . + . ID=gene-MK542_06605;Name=MK542_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06605 JAKUZA010000036.1 Protein Homology CDS 11186 11728 . + 0 ID=cds-MCY7217836.1;Parent=gene-MK542_06605;Dbxref=NCBI_GP:MCY7217836.1;Name=MCY7217836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=MK542_06605;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCY7217836.1;transl_table=11 JAKUZA010000036.1 Genbank gene 11689 13137 . + . ID=gene-MK542_06610;Name=MK542_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06610 JAKUZA010000036.1 Protein Homology CDS 11689 13137 . + 0 ID=cds-MCY7217837.1;Parent=gene-MK542_06610;Dbxref=NCBI_GP:MCY7217837.1;Name=MCY7217837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003102018.1;locus_tag=MK542_06610;product=ABC transporter ATP-binding protein;protein_id=MCY7217837.1;transl_table=11 JAKUZA010000036.1 Genbank gene 13542 14912 . + . ID=gene-MK542_06615;Name=MK542_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06615 JAKUZA010000036.1 Protein Homology CDS 13542 14912 . + 0 ID=cds-MCY7217838.1;Parent=gene-MK542_06615;Dbxref=NCBI_GP:MCY7217838.1;Name=MCY7217838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961712.1;locus_tag=MK542_06615;product=DUF4832 domain-containing protein;protein_id=MCY7217838.1;transl_table=11 JAKUZA010000036.1 Genbank gene 15445 17526 . + . ID=gene-MK542_06620;Name=MK542_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06620 JAKUZA010000036.1 GeneMarkS-2+ CDS 15445 17526 . + 0 ID=cds-MCY7217839.1;Parent=gene-MK542_06620;Dbxref=NCBI_GP:MCY7217839.1;Name=MCY7217839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06620;product=hypothetical protein;protein_id=MCY7217839.1;transl_table=11 JAKUZA010000036.1 Genbank gene 17547 18047 . + . ID=gene-MK542_06625;Name=MK542_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06625 JAKUZA010000036.1 GeneMarkS-2+ CDS 17547 18047 . + 0 ID=cds-MCY7217840.1;Parent=gene-MK542_06625;Dbxref=NCBI_GP:MCY7217840.1;Name=MCY7217840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06625;product=hypothetical protein;protein_id=MCY7217840.1;transl_table=11 JAKUZA010000036.1 Genbank gene 18102 18464 . + . ID=gene-MK542_06630;Name=MK542_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06630 JAKUZA010000036.1 GeneMarkS-2+ CDS 18102 18464 . + 0 ID=cds-MCY7217841.1;Parent=gene-MK542_06630;Dbxref=NCBI_GP:MCY7217841.1;Name=MCY7217841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_06630;product=hypothetical protein;protein_id=MCY7217841.1;transl_table=11 JAKUZA010000036.1 Genbank pseudogene 18457 20283 . + . ID=gene-MK542_06635;Name=MK542_06635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_06635;pseudo=true JAKUZA010000036.1 Protein Homology CDS 18457 20283 . + 0 ID=cds-MK542_06635;Parent=gene-MK542_06635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013642904.1;locus_tag=MK542_06635;product=DUF2194 domain-containing protein;pseudo=true;transl_table=11 JAKUZA010000036.1 Genbank gene 20317 21579 . + . ID=gene-MK542_06640;Name=pelF;gbkey=Gene;gene=pelF;gene_biotype=protein_coding;locus_tag=MK542_06640 JAKUZA010000036.1 Protein Homology CDS 20317 21579 . + 0 ID=cds-MCY7217842.1;Parent=gene-MK542_06640;Dbxref=NCBI_GP:MCY7217842.1;Name=MCY7217842.1;Ontology_term=GO:0016757;gbkey=CDS;gene=pelF;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009853838.1;locus_tag=MK542_06640;product=GT4 family glycosyltransferase PelF;protein_id=MCY7217842.1;transl_table=11 JAKUZA010000036.1 Genbank gene 21533 22330 . + . ID=gene-MK542_06645;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=MK542_06645 JAKUZA010000036.1 Protein Homology CDS 21533 22330 . + 0 ID=cds-MCY7217843.1;Parent=gene-MK542_06645;Dbxref=NCBI_GP:MCY7217843.1;Name=MCY7217843.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931909.1;locus_tag=MK542_06645;product=UDP-glucose 4-epimerase GalE;protein_id=MCY7217843.1;transl_table=11 JAKUZA010000036.1 Genbank gene 22659 23504 . + . ID=gene-MK542_06650;Name=MK542_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06650 JAKUZA010000036.1 Protein Homology CDS 22659 23504 . + 0 ID=cds-MCY7217844.1;Parent=gene-MK542_06650;Dbxref=NCBI_GP:MCY7217844.1;Name=MCY7217844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605665.1;locus_tag=MK542_06650;product=S-adenosyl-l-methionine hydroxide adenosyltransferase family protein;protein_id=MCY7217844.1;transl_table=11 JAKUZA010000036.1 Genbank gene 23516 24079 . + . ID=gene-MK542_06655;Name=MK542_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06655 JAKUZA010000036.1 Protein Homology CDS 23516 24079 . + 0 ID=cds-MCY7217845.1;Parent=gene-MK542_06655;Dbxref=NCBI_GP:MCY7217845.1;Name=MCY7217845.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591812.1;locus_tag=MK542_06655;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=MCY7217845.1;transl_table=11 ##sequence-region JAKUZA010000037.1 1 22774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000037.1 Genbank region 1 22774 . + . ID=JAKUZA010000037.1:1..22774;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000037.1 Genbank gene 1 1330 . - . ID=gene-MK542_06660;Name=MK542_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06660;partial=true;start_range=.,1 JAKUZA010000037.1 Protein Homology CDS 889 1330 . - 0 ID=cds-MCY7217846.1;Parent=gene-MK542_06660;Dbxref=NCBI_GP:MCY7217846.1;Name=MCY7217846.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1;locus_tag=MK542_06660;partial=true;product=IS3 family transposase;protein_id=MCY7217846.1;transl_table=11 JAKUZA010000037.1 Protein Homology CDS 1 889 . - 2 ID=cds-MCY7217846.1;Parent=gene-MK542_06660;Dbxref=NCBI_GP:MCY7217846.1;Name=MCY7217846.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1;locus_tag=MK542_06660;partial=true;product=IS3 family transposase;protein_id=MCY7217846.1;start_range=.,1;transl_table=11 JAKUZA010000037.1 Genbank gene 1409 2659 . - . ID=gene-MK542_06665;Name=MK542_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06665 JAKUZA010000037.1 Protein Homology CDS 1409 2659 . - 0 ID=cds-MCY7217847.1;Parent=gene-MK542_06665;Dbxref=NCBI_GP:MCY7217847.1;Name=MCY7217847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591421.1;locus_tag=MK542_06665;product=carbohydrate-binding domain-containing protein;protein_id=MCY7217847.1;transl_table=11 JAKUZA010000037.1 Genbank gene 2677 3357 . - . ID=gene-MK542_06670;Name=MK542_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06670 JAKUZA010000037.1 Protein Homology CDS 2677 3357 . - 0 ID=cds-MCY7217848.1;Parent=gene-MK542_06670;Dbxref=NCBI_GP:MCY7217848.1;Name=MCY7217848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009569694.1;locus_tag=MK542_06670;product=DUF4956 domain-containing protein;protein_id=MCY7217848.1;transl_table=11 JAKUZA010000037.1 Genbank gene 3350 4075 . - . ID=gene-MK542_06675;Name=MK542_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06675 JAKUZA010000037.1 Protein Homology CDS 3350 4075 . - 0 ID=cds-MCY7217849.1;Parent=gene-MK542_06675;Dbxref=NCBI_GP:MCY7217849.1;Name=MCY7217849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592101.1;locus_tag=MK542_06675;product=polyphosphate polymerase domain-containing protein;protein_id=MCY7217849.1;transl_table=11 JAKUZA010000037.1 Genbank gene 4318 6717 . - . ID=gene-MK542_06680;Name=MK542_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06680 JAKUZA010000037.1 Protein Homology CDS 4318 6717 . - 0 ID=cds-MCY7217850.1;Parent=gene-MK542_06680;Dbxref=NCBI_GP:MCY7217850.1;Name=MCY7217850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026747.1;locus_tag=MK542_06680;product=YhgE/Pip domain-containing protein;protein_id=MCY7217850.1;transl_table=11 JAKUZA010000037.1 Genbank gene 6860 7390 . + . ID=gene-MK542_06685;Name=MK542_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06685 JAKUZA010000037.1 Protein Homology CDS 6860 7390 . + 0 ID=cds-MCY7217851.1;Parent=gene-MK542_06685;Dbxref=NCBI_GP:MCY7217851.1;Name=MCY7217851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928524.1;locus_tag=MK542_06685;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7217851.1;transl_table=11 JAKUZA010000037.1 Genbank gene 7562 8173 . - . ID=gene-MK542_06690;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=MK542_06690 JAKUZA010000037.1 Protein Homology CDS 7562 8173 . - 0 ID=cds-MCY7217852.1;Parent=gene-MK542_06690;Dbxref=NCBI_GP:MCY7217852.1;Name=MCY7217852.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=MK542_06690;product=30S ribosomal protein S4;protein_id=MCY7217852.1;transl_table=11 JAKUZA010000037.1 Genbank gene 8592 10745 . + . ID=gene-MK542_06695;Name=comA;gbkey=Gene;gene=comA;gene_biotype=protein_coding;locus_tag=MK542_06695 JAKUZA010000037.1 Protein Homology CDS 8592 10745 . + 0 ID=cds-MCY7217853.1;Parent=gene-MK542_06695;Dbxref=NCBI_GP:MCY7217853.1;Name=MCY7217853.1;gbkey=CDS;gene=comA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000668284.1;locus_tag=MK542_06695;product=peptide cleavage/export ABC transporter ComA;protein_id=MCY7217853.1;transl_table=11 JAKUZA010000037.1 Genbank gene 10759 12114 . + . ID=gene-MK542_06700;Name=MK542_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06700 JAKUZA010000037.1 Protein Homology CDS 10759 12114 . + 0 ID=cds-MCY7217854.1;Parent=gene-MK542_06700;Dbxref=NCBI_GP:MCY7217854.1;Name=MCY7217854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801614.1;locus_tag=MK542_06700;product=bacteriocin secretion accessory protein;protein_id=MCY7217854.1;transl_table=11 JAKUZA010000037.1 Genbank gene 12163 12891 . - . ID=gene-MK542_06705;Name=MK542_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06705 JAKUZA010000037.1 Protein Homology CDS 12163 12891 . - 0 ID=cds-MCY7217855.1;Parent=gene-MK542_06705;Dbxref=NCBI_GP:MCY7217855.1;Name=MCY7217855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136237.1;locus_tag=MK542_06705;product=ABC transporter ATP-binding protein;protein_id=MCY7217855.1;transl_table=11 JAKUZA010000037.1 Genbank gene 12891 13943 . - . ID=gene-MK542_06710;Name=MK542_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06710 JAKUZA010000037.1 Protein Homology CDS 12891 13943 . - 0 ID=cds-MCY7217856.1;Parent=gene-MK542_06710;Dbxref=NCBI_GP:MCY7217856.1;Name=MCY7217856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899558.1;locus_tag=MK542_06710;product=ABC transporter substrate-binding protein;protein_id=MCY7217856.1;transl_table=11 JAKUZA010000037.1 Genbank gene 13934 14686 . - . ID=gene-MK542_06715;Name=MK542_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06715 JAKUZA010000037.1 Protein Homology CDS 13934 14686 . - 0 ID=cds-MCY7217857.1;Parent=gene-MK542_06715;Dbxref=NCBI_GP:MCY7217857.1;Name=MCY7217857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837710.1;locus_tag=MK542_06715;product=ABC transporter permease;protein_id=MCY7217857.1;transl_table=11 JAKUZA010000037.1 Genbank gene 14649 14939 . - . ID=gene-MK542_06720;Name=MK542_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06720 JAKUZA010000037.1 Protein Homology CDS 14649 14939 . - 0 ID=cds-MCY7217858.1;Parent=gene-MK542_06720;Dbxref=NCBI_GP:MCY7217858.1;Name=MCY7217858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008810017.1;locus_tag=MK542_06720;product=thiamine-binding protein;protein_id=MCY7217858.1;transl_table=11 JAKUZA010000037.1 cmsearch riboswitch 15010 15112 . - . ID=id-JAKUZA010000037.1:15010..15112;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000037.1 Genbank gene 15197 15820 . - . ID=gene-MK542_06725;Name=MK542_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06725 JAKUZA010000037.1 Protein Homology CDS 15197 15820 . - 0 ID=cds-MCY7217859.1;Parent=gene-MK542_06725;Dbxref=NCBI_GP:MCY7217859.1;Name=MCY7217859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184951.1;locus_tag=MK542_06725;product=HAD family phosphatase;protein_id=MCY7217859.1;transl_table=11 JAKUZA010000037.1 Genbank gene 16090 16368 . - . ID=gene-MK542_06730;Name=MK542_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06730 JAKUZA010000037.1 Protein Homology CDS 16090 16368 . - 0 ID=cds-MCY7217860.1;Parent=gene-MK542_06730;Dbxref=NCBI_GP:MCY7217860.1;Name=MCY7217860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002962475.1;locus_tag=MK542_06730;product=Veg family protein;protein_id=MCY7217860.1;transl_table=11 JAKUZA010000037.1 Genbank gene 16370 17725 . - . ID=gene-MK542_06735;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=MK542_06735 JAKUZA010000037.1 Protein Homology CDS 16370 17725 . - 0 ID=cds-MCY7217861.1;Parent=gene-MK542_06735;Dbxref=NCBI_GP:MCY7217861.1;Name=MCY7217861.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808062.1;locus_tag=MK542_06735;product=replicative DNA helicase;protein_id=MCY7217861.1;transl_table=11 JAKUZA010000037.1 Genbank gene 17752 18204 . - . ID=gene-MK542_06740;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=MK542_06740 JAKUZA010000037.1 Protein Homology CDS 17752 18204 . - 0 ID=cds-MCY7217862.1;Parent=gene-MK542_06740;Dbxref=NCBI_GP:MCY7217862.1;Name=MCY7217862.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999581.1;locus_tag=MK542_06740;product=50S ribosomal protein L9;protein_id=MCY7217862.1;transl_table=11 JAKUZA010000037.1 Genbank gene 18206 20221 . - . ID=gene-MK542_06745;Name=MK542_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06745 JAKUZA010000037.1 Protein Homology CDS 18206 20221 . - 0 ID=cds-MCY7217863.1;Parent=gene-MK542_06745;Dbxref=NCBI_GP:MCY7217863.1;Name=MCY7217863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894244.1;locus_tag=MK542_06745;product=DHH family phosphoesterase;protein_id=MCY7217863.1;transl_table=11 JAKUZA010000037.1 Genbank gene 20663 22582 . - . ID=gene-MK542_06750;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=MK542_06750 JAKUZA010000037.1 Protein Homology CDS 20663 22582 . - 0 ID=cds-MCY7217864.1;Parent=gene-MK542_06750;Dbxref=NCBI_GP:MCY7217864.1;Name=MCY7217864.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999579.1;locus_tag=MK542_06750;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=MCY7217864.1;transl_table=11 ##sequence-region JAKUZA010000038.1 1 38939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000038.1 Genbank region 1 38939 . + . ID=JAKUZA010000038.1:1..38939;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000038.1 Genbank gene 1 158 . + . ID=gene-MK542_06755;Name=MK542_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06755;partial=true;start_range=.,1 JAKUZA010000038.1 Protein Homology CDS 1 158 . + 2 ID=cds-MCY7217865.1;Parent=gene-MK542_06755;Dbxref=NCBI_GP:MCY7217865.1;Name=MCY7217865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_06755;partial=true;product=IS481 family transposase;protein_id=MCY7217865.1;start_range=.,1;transl_table=11 JAKUZA010000038.1 Genbank gene 392 1111 . + . ID=gene-MK542_06760;Name=MK542_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06760 JAKUZA010000038.1 Protein Homology CDS 392 1111 . + 0 ID=cds-MCY7217866.1;Parent=gene-MK542_06760;Dbxref=NCBI_GP:MCY7217866.1;Name=MCY7217866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001868335.1;locus_tag=MK542_06760;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MCY7217866.1;transl_table=11 JAKUZA010000038.1 Genbank gene 1147 2190 . + . ID=gene-MK542_06765;Name=MK542_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06765 JAKUZA010000038.1 Protein Homology CDS 1147 2190 . + 0 ID=cds-MCY7217867.1;Parent=gene-MK542_06765;Dbxref=NCBI_GP:MCY7217867.1;Name=MCY7217867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003695768.1;locus_tag=MK542_06765;product=glycosyltransferase family 2 protein;protein_id=MCY7217867.1;transl_table=11 JAKUZA010000038.1 Genbank gene 2199 3113 . + . ID=gene-MK542_06770;Name=MK542_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06770 JAKUZA010000038.1 Protein Homology CDS 2199 3113 . + 0 ID=cds-MCY7217868.1;Parent=gene-MK542_06770;Dbxref=NCBI_GP:MCY7217868.1;Name=MCY7217868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003695767.1;locus_tag=MK542_06770;product=DUF616 domain-containing protein;protein_id=MCY7217868.1;transl_table=11 JAKUZA010000038.1 Genbank gene 3113 4327 . + . ID=gene-MK542_06775;Name=MK542_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06775 JAKUZA010000038.1 Protein Homology CDS 3113 4327 . + 0 ID=cds-MCY7217869.1;Parent=gene-MK542_06775;Dbxref=NCBI_GP:MCY7217869.1;Name=MCY7217869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.2;locus_tag=MK542_06775;product=O-antigen ligase family protein;protein_id=MCY7217869.1;transl_table=11 JAKUZA010000038.1 Genbank gene 4329 5789 . + . ID=gene-MK542_06780;Name=MK542_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06780 JAKUZA010000038.1 Protein Homology CDS 4329 5789 . + 0 ID=cds-MCY7217870.1;Parent=gene-MK542_06780;Dbxref=NCBI_GP:MCY7217870.1;Name=MCY7217870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=MK542_06780;product=lipopolysaccharide biosynthesis protein;protein_id=MCY7217870.1;transl_table=11 JAKUZA010000038.1 Genbank gene 6138 6671 . + . ID=gene-MK542_06785;Name=MK542_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06785 JAKUZA010000038.1 Protein Homology CDS 6138 6671 . + 0 ID=cds-MCY7217871.1;Parent=gene-MK542_06785;Dbxref=NCBI_GP:MCY7217871.1;Name=MCY7217871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251584.1;locus_tag=MK542_06785;product=acyltransferase;protein_id=MCY7217871.1;transl_table=11 JAKUZA010000038.1 Genbank gene 6696 7754 . + . ID=gene-MK542_06790;Name=MK542_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06790 JAKUZA010000038.1 Protein Homology CDS 6696 7754 . + 0 ID=cds-MCY7217872.1;Parent=gene-MK542_06790;Dbxref=NCBI_GP:MCY7217872.1;Name=MCY7217872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003695764.1;locus_tag=MK542_06790;product=NAD(P)-dependent oxidoreductase;protein_id=MCY7217872.1;transl_table=11 JAKUZA010000038.1 Genbank gene 7729 8820 . + . ID=gene-MK542_06795;Name=gla;gbkey=Gene;gene=gla;gene_biotype=protein_coding;locus_tag=MK542_06795 JAKUZA010000038.1 Protein Homology CDS 7729 8820 . + 0 ID=cds-MCY7217873.1;Parent=gene-MK542_06795;Dbxref=NCBI_GP:MCY7217873.1;Name=MCY7217873.1;gbkey=CDS;gene=gla;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354396.1;locus_tag=MK542_06795;product=UDP-glucuronate 4-epimerase Gla;protein_id=MCY7217873.1;transl_table=11 JAKUZA010000038.1 Genbank gene 8848 10080 . + . ID=gene-MK542_06800;Name=MK542_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06800 JAKUZA010000038.1 Protein Homology CDS 8848 10080 . + 0 ID=cds-MCY7217874.1;Parent=gene-MK542_06800;Dbxref=NCBI_GP:MCY7217874.1;Name=MCY7217874.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002992300.1;locus_tag=MK542_06800;product=nucleotide sugar dehydrogenase;protein_id=MCY7217874.1;transl_table=11 JAKUZA010000038.1 Genbank gene 10224 11072 . - . ID=gene-MK542_06805;Name=MK542_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06805 JAKUZA010000038.1 Protein Homology CDS 10224 11072 . - 0 ID=cds-MCY7217875.1;Parent=gene-MK542_06805;Dbxref=NCBI_GP:MCY7217875.1;Name=MCY7217875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591276.1;locus_tag=MK542_06805;product=methyltransferase domain-containing protein;protein_id=MCY7217875.1;transl_table=11 JAKUZA010000038.1 Genbank gene 11128 12384 . - . ID=gene-MK542_06810;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=MK542_06810 JAKUZA010000038.1 Protein Homology CDS 11128 12384 . - 0 ID=cds-MCY7217876.1;Parent=gene-MK542_06810;Dbxref=NCBI_GP:MCY7217876.1;Name=MCY7217876.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546895.1;locus_tag=MK542_06810;product=tyrosine--tRNA ligase;protein_id=MCY7217876.1;transl_table=11 JAKUZA010000038.1 Genbank gene 12583 14958 . + . ID=gene-MK542_06815;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=MK542_06815 JAKUZA010000038.1 Protein Homology CDS 12583 14958 . + 0 ID=cds-MCY7217877.1;Parent=gene-MK542_06815;Dbxref=NCBI_GP:MCY7217877.1;Name=MCY7217877.1;gbkey=CDS;gene=pbp1b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896787.1;locus_tag=MK542_06815;product=penicillin-binding protein PBP1B;protein_id=MCY7217877.1;transl_table=11 JAKUZA010000038.1 Genbank gene 15421 18987 . + . ID=gene-MK542_06820;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=MK542_06820 JAKUZA010000038.1 Protein Homology CDS 15421 18987 . + 0 ID=cds-MCY7217878.1;Parent=gene-MK542_06820;Dbxref=NCBI_GP:MCY7217878.1;Name=MCY7217878.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070801.1;locus_tag=MK542_06820;product=DNA-directed RNA polymerase subunit beta;protein_id=MCY7217878.1;transl_table=11 JAKUZA010000038.1 Genbank gene 19028 22672 . + . ID=gene-MK542_06825;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=MK542_06825 JAKUZA010000038.1 Protein Homology CDS 19028 22672 . + 0 ID=cds-MCY7217879.1;Parent=gene-MK542_06825;Dbxref=NCBI_GP:MCY7217879.1;Name=MCY7217879.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604273.1;locus_tag=MK542_06825;product=DNA-directed RNA polymerase subunit beta';protein_id=MCY7217879.1;transl_table=11 JAKUZA010000038.1 Genbank gene 22918 23295 . + . ID=gene-MK542_06830;Name=MK542_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06830 JAKUZA010000038.1 Protein Homology CDS 22918 23295 . + 0 ID=cds-MCY7217880.1;Parent=gene-MK542_06830;Dbxref=NCBI_GP:MCY7217880.1;Name=MCY7217880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896774.1;locus_tag=MK542_06830;product=DUF1033 family protein;protein_id=MCY7217880.1;transl_table=11 JAKUZA010000038.1 Genbank gene 23370 24311 . + . ID=gene-MK542_06835;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=MK542_06835 JAKUZA010000038.1 Protein Homology CDS 23370 24311 . + 0 ID=cds-MCY7217881.1;Parent=gene-MK542_06835;Dbxref=NCBI_GP:MCY7217881.1;Name=MCY7217881.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193750.1;locus_tag=MK542_06835;product=Flp pilus assembly complex ATPase component TadA;protein_id=MCY7217881.1;transl_table=11 JAKUZA010000038.1 Genbank gene 24259 25275 . + . ID=gene-MK542_06840;Name=MK542_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06840 JAKUZA010000038.1 Protein Homology CDS 24259 25275 . + 0 ID=cds-MCY7217882.1;Parent=gene-MK542_06840;Dbxref=NCBI_GP:MCY7217882.1;Name=MCY7217882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605920.1;locus_tag=MK542_06840;product=type II secretion system F family protein;protein_id=MCY7217882.1;transl_table=11 JAKUZA010000038.1 Genbank gene 25272 25589 . + . ID=gene-MK542_06845;Name=MK542_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06845 JAKUZA010000038.1 Protein Homology CDS 25272 25589 . + 0 ID=cds-MCY7217883.1;Parent=gene-MK542_06845;Dbxref=NCBI_GP:MCY7217883.1;Name=MCY7217883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896769.1;locus_tag=MK542_06845;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=MCY7217883.1;transl_table=11 JAKUZA010000038.1 Genbank gene 25564 25983 . + . ID=gene-MK542_06850;Name=MK542_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06850 JAKUZA010000038.1 Protein Homology CDS 25564 25983 . + 0 ID=cds-MCY7217884.1;Parent=gene-MK542_06850;Dbxref=NCBI_GP:MCY7217884.1;Name=MCY7217884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605918.1;locus_tag=MK542_06850;product=type II secretion system GspH family protein;protein_id=MCY7217884.1;transl_table=11 JAKUZA010000038.1 Genbank gene 25949 26242 . + . ID=gene-MK542_06855;Name=MK542_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06855 JAKUZA010000038.1 Protein Homology CDS 25949 26242 . + 0 ID=cds-MCY7217885.1;Parent=gene-MK542_06855;Dbxref=NCBI_GP:MCY7217885.1;Name=MCY7217885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147812.1;locus_tag=MK542_06855;product=hypothetical protein;protein_id=MCY7217885.1;transl_table=11 JAKUZA010000038.1 Genbank gene 26226 26663 . + . ID=gene-MK542_06860;Name=MK542_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06860 JAKUZA010000038.1 Protein Homology CDS 26226 26663 . + 0 ID=cds-MCY7217886.1;Parent=gene-MK542_06860;Dbxref=NCBI_GP:MCY7217886.1;Name=MCY7217886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193742.1;locus_tag=MK542_06860;product=competence protein ComGF;protein_id=MCY7217886.1;transl_table=11 JAKUZA010000038.1 Genbank gene 26644 27024 . + . ID=gene-MK542_06865;Name=MK542_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06865 JAKUZA010000038.1 Protein Homology CDS 26644 27024 . + 0 ID=cds-MCY7217887.1;Parent=gene-MK542_06865;Dbxref=NCBI_GP:MCY7217887.1;Name=MCY7217887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189075.1;locus_tag=MK542_06865;product=competence protein ComGG;protein_id=MCY7217887.1;transl_table=11 JAKUZA010000038.1 Genbank gene 27105 28058 . + . ID=gene-MK542_06870;Name=MK542_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06870 JAKUZA010000038.1 Protein Homology CDS 27105 28058 . + 0 ID=cds-MCY7217888.1;Parent=gene-MK542_06870;Dbxref=NCBI_GP:MCY7217888.1;Name=MCY7217888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009569507.1;locus_tag=MK542_06870;product=class I SAM-dependent methyltransferase;protein_id=MCY7217888.1;transl_table=11 JAKUZA010000038.1 Genbank gene 28107 29300 . + . ID=gene-MK542_06875;Name=MK542_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06875 JAKUZA010000038.1 Protein Homology CDS 28107 29300 . + 0 ID=cds-MCY7217889.1;Parent=gene-MK542_06875;Dbxref=NCBI_GP:MCY7217889.1;Name=MCY7217889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898629.1;locus_tag=MK542_06875;product=acetate kinase;protein_id=MCY7217889.1;transl_table=11 JAKUZA010000038.1 Genbank gene 29483 30154 . + . ID=gene-MK542_06880;Name=MK542_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06880 JAKUZA010000038.1 Protein Homology CDS 29483 30154 . + 0 ID=cds-MCY7217890.1;Parent=gene-MK542_06880;Dbxref=NCBI_GP:MCY7217890.1;Name=MCY7217890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591269.1;locus_tag=MK542_06880;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217890.1;transl_table=11 JAKUZA010000038.1 Genbank gene 30308 30946 . + . ID=gene-MK542_06885;Name=MK542_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06885 JAKUZA010000038.1 Protein Homology CDS 30308 30946 . + 0 ID=cds-MCY7217891.1;Parent=gene-MK542_06885;Dbxref=NCBI_GP:MCY7217891.1;Name=MCY7217891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591268.1;locus_tag=MK542_06885;product=hypothetical protein;protein_id=MCY7217891.1;transl_table=11 JAKUZA010000038.1 Genbank gene 31123 32076 . + . ID=gene-MK542_06890;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=MK542_06890 JAKUZA010000038.1 Protein Homology CDS 31123 32076 . + 0 ID=cds-MCY7217892.1;Parent=gene-MK542_06890;Dbxref=NCBI_GP:MCY7217892.1;Name=MCY7217892.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896760.1;locus_tag=MK542_06890;product=dihydropteroate synthase;protein_id=MCY7217892.1;transl_table=11 JAKUZA010000038.1 Genbank gene 32079 33422 . + . ID=gene-MK542_06895;Name=MK542_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06895 JAKUZA010000038.1 Protein Homology CDS 32079 33422 . + 0 ID=cds-MCY7217893.1;Parent=gene-MK542_06895;Dbxref=NCBI_GP:MCY7217893.1;Name=MCY7217893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591266.1;locus_tag=MK542_06895;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MCY7217893.1;transl_table=11 JAKUZA010000038.1 Genbank gene 33403 33957 . + . ID=gene-MK542_06900;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=MK542_06900 JAKUZA010000038.1 Protein Homology CDS 33403 33957 . + 0 ID=cds-MCY7217894.1;Parent=gene-MK542_06900;Dbxref=NCBI_GP:MCY7217894.1;Name=MCY7217894.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712785.1;locus_tag=MK542_06900;product=GTP cyclohydrolase I FolE;protein_id=MCY7217894.1;transl_table=11 JAKUZA010000038.1 Genbank gene 34045 34857 . + . ID=gene-MK542_06905;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=MK542_06905 JAKUZA010000038.1 Protein Homology CDS 34045 34857 . + 0 ID=cds-MCY7217895.1;Parent=gene-MK542_06905;Dbxref=NCBI_GP:MCY7217895.1;Name=MCY7217895.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130930.1;locus_tag=MK542_06905;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=MCY7217895.1;transl_table=11 JAKUZA010000038.1 Genbank gene 34952 35659 . + . ID=gene-MK542_06910;Name=MK542_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06910 JAKUZA010000038.1 Protein Homology CDS 34952 35659 . + 0 ID=cds-MCY7217896.1;Parent=gene-MK542_06910;Dbxref=NCBI_GP:MCY7217896.1;Name=MCY7217896.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400711.1;locus_tag=MK542_06910;product=ATP-binding cassette domain-containing protein;protein_id=MCY7217896.1;transl_table=11 JAKUZA010000038.1 Genbank gene 35661 36449 . + . ID=gene-MK542_06915;Name=MK542_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06915 JAKUZA010000038.1 Protein Homology CDS 35661 36449 . + 0 ID=cds-MCY7217897.1;Parent=gene-MK542_06915;Dbxref=NCBI_GP:MCY7217897.1;Name=MCY7217897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019795528.1;locus_tag=MK542_06915;product=lantibiotic ABC transporter permease;protein_id=MCY7217897.1;transl_table=11 JAKUZA010000038.1 Genbank gene 36449 37171 . + . ID=gene-MK542_06920;Name=MK542_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06920 JAKUZA010000038.1 Protein Homology CDS 36449 37171 . + 0 ID=cds-MCY7217898.1;Parent=gene-MK542_06920;Dbxref=NCBI_GP:MCY7217898.1;Name=MCY7217898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520672.1;locus_tag=MK542_06920;product=lantibiotic ABC transporter permease;protein_id=MCY7217898.1;transl_table=11 JAKUZA010000038.1 Genbank gene 37184 37882 . + . ID=gene-MK542_06925;Name=MK542_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06925 JAKUZA010000038.1 Protein Homology CDS 37184 37882 . + 0 ID=cds-MCY7217899.1;Parent=gene-MK542_06925;Dbxref=NCBI_GP:MCY7217899.1;Name=MCY7217899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019795527.1;locus_tag=MK542_06925;product=response regulator transcription factor;protein_id=MCY7217899.1;transl_table=11 JAKUZA010000038.1 Genbank gene 37849 38886 . + . ID=gene-MK542_06930;Name=MK542_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06930 JAKUZA010000038.1 Protein Homology CDS 37849 38886 . + 0 ID=cds-MCY7217900.1;Parent=gene-MK542_06930;Dbxref=NCBI_GP:MCY7217900.1;Name=MCY7217900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919855.1;locus_tag=MK542_06930;product=HAMP domain-containing histidine kinase;protein_id=MCY7217900.1;transl_table=11 ##sequence-region JAKUZA010000039.1 1 17393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000039.1 Genbank region 1 17393 . + . ID=JAKUZA010000039.1:1..17393;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000039.1 Genbank gene 188 589 . - . ID=gene-MK542_06935;Name=MK542_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06935 JAKUZA010000039.1 Protein Homology CDS 188 589 . - 0 ID=cds-MCY7217901.1;Parent=gene-MK542_06935;Dbxref=NCBI_GP:MCY7217901.1;Name=MCY7217901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590963.1;locus_tag=MK542_06935;product=DUF3021 domain-containing protein;protein_id=MCY7217901.1;transl_table=11 JAKUZA010000039.1 Genbank gene 600 1055 . - . ID=gene-MK542_06940;Name=MK542_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06940 JAKUZA010000039.1 Protein Homology CDS 600 1055 . - 0 ID=cds-MCY7217902.1;Parent=gene-MK542_06940;Dbxref=NCBI_GP:MCY7217902.1;Name=MCY7217902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894770.1;locus_tag=MK542_06940;product=LytTR family transcriptional regulator;protein_id=MCY7217902.1;transl_table=11 JAKUZA010000039.1 Genbank gene 1076 1939 . - . ID=gene-MK542_06945;Name=MK542_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06945 JAKUZA010000039.1 Protein Homology CDS 1076 1939 . - 0 ID=cds-MCY7217903.1;Parent=gene-MK542_06945;Dbxref=NCBI_GP:MCY7217903.1;Name=MCY7217903.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192992.1;locus_tag=MK542_06945;product=ABC transporter permease;protein_id=MCY7217903.1;transl_table=11 JAKUZA010000039.1 Genbank gene 1940 2806 . - . ID=gene-MK542_06950;Name=MK542_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06950 JAKUZA010000039.1 Protein Homology CDS 1940 2806 . - 0 ID=cds-MCY7217904.1;Parent=gene-MK542_06950;Dbxref=NCBI_GP:MCY7217904.1;Name=MCY7217904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192995.1;locus_tag=MK542_06950;product=ABC transporter ATP-binding protein;protein_id=MCY7217904.1;transl_table=11 JAKUZA010000039.1 Genbank gene 2957 4957 . - . ID=gene-MK542_06955;Name=MK542_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06955 JAKUZA010000039.1 Protein Homology CDS 2957 4957 . - 0 ID=cds-MCY7217905.1;Parent=gene-MK542_06955;Dbxref=NCBI_GP:MCY7217905.1;Name=MCY7217905.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894764.1;locus_tag=MK542_06955;product=FtsX-like permease family protein;protein_id=MCY7217905.1;transl_table=11 JAKUZA010000039.1 Genbank gene 4938 5717 . - . ID=gene-MK542_06960;Name=MK542_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06960 JAKUZA010000039.1 Protein Homology CDS 4938 5717 . - 0 ID=cds-MCY7217906.1;Parent=gene-MK542_06960;Dbxref=NCBI_GP:MCY7217906.1;Name=MCY7217906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003098149.1;locus_tag=MK542_06960;product=ABC transporter ATP-binding protein;protein_id=MCY7217906.1;transl_table=11 JAKUZA010000039.1 Genbank gene 5802 6560 . - . ID=gene-MK542_06965;Name=MK542_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06965 JAKUZA010000039.1 Protein Homology CDS 5802 6560 . - 0 ID=cds-MCY7217907.1;Parent=gene-MK542_06965;Dbxref=NCBI_GP:MCY7217907.1;Name=MCY7217907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605637.1;locus_tag=MK542_06965;product=conjugal transfer protein TraX;protein_id=MCY7217907.1;transl_table=11 JAKUZA010000039.1 Genbank gene 6672 7652 . - . ID=gene-MK542_06970;Name=MK542_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06970 JAKUZA010000039.1 Protein Homology CDS 6672 7652 . - 0 ID=cds-MCY7217908.1;Parent=gene-MK542_06970;Dbxref=NCBI_GP:MCY7217908.1;Name=MCY7217908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837284.1;locus_tag=MK542_06970;product=sensor histidine kinase;protein_id=MCY7217908.1;transl_table=11 JAKUZA010000039.1 Genbank gene 7636 8322 . - . ID=gene-MK542_06975;Name=MK542_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06975 JAKUZA010000039.1 Protein Homology CDS 7636 8322 . - 0 ID=cds-MCY7217909.1;Parent=gene-MK542_06975;Dbxref=NCBI_GP:MCY7217909.1;Name=MCY7217909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590974.1;locus_tag=MK542_06975;product=response regulator transcription factor;protein_id=MCY7217909.1;transl_table=11 JAKUZA010000039.1 Genbank gene 8542 9768 . + . ID=gene-MK542_06980;Name=MK542_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06980 JAKUZA010000039.1 Protein Homology CDS 8542 9768 . + 0 ID=cds-MCY7217910.1;Parent=gene-MK542_06980;Dbxref=NCBI_GP:MCY7217910.1;Name=MCY7217910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659149.1;locus_tag=MK542_06980;product=DUF2974 domain-containing protein;protein_id=MCY7217910.1;transl_table=11 JAKUZA010000039.1 Genbank gene 10025 10681 . - . ID=gene-MK542_06985;Name=MK542_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06985 JAKUZA010000039.1 Protein Homology CDS 10025 10681 . - 0 ID=cds-MCY7217911.1;Parent=gene-MK542_06985;Dbxref=NCBI_GP:MCY7217911.1;Name=MCY7217911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909176.1;locus_tag=MK542_06985;product=DUF4230 domain-containing protein;protein_id=MCY7217911.1;transl_table=11 JAKUZA010000039.1 Genbank gene 10994 12991 . - . ID=gene-MK542_06990;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=MK542_06990 JAKUZA010000039.1 Protein Homology CDS 10994 12991 . - 0 ID=cds-MCY7217912.1;Parent=gene-MK542_06990;Dbxref=NCBI_GP:MCY7217912.1;Name=MCY7217912.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605643.1;locus_tag=MK542_06990;product=methionine--tRNA ligase;protein_id=MCY7217912.1;transl_table=11 JAKUZA010000039.1 Genbank gene 13428 14099 . + . ID=gene-MK542_06995;Name=MK542_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_06995 JAKUZA010000039.1 Protein Homology CDS 13428 14099 . + 0 ID=cds-MCY7217913.1;Parent=gene-MK542_06995;Dbxref=NCBI_GP:MCY7217913.1;Name=MCY7217913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269831.1;locus_tag=MK542_06995;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=MCY7217913.1;transl_table=11 JAKUZA010000039.1 Genbank gene 14184 15011 . + . ID=gene-MK542_07000;Name=MK542_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07000 JAKUZA010000039.1 Protein Homology CDS 14184 15011 . + 0 ID=cds-MCY7217914.1;Parent=gene-MK542_07000;Dbxref=NCBI_GP:MCY7217914.1;Name=MCY7217914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006596696.1;locus_tag=MK542_07000;product=exodeoxyribonuclease III;protein_id=MCY7217914.1;transl_table=11 JAKUZA010000039.1 Genbank gene 15023 15409 . + . ID=gene-MK542_07005;Name=MK542_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07005 JAKUZA010000039.1 Protein Homology CDS 15023 15409 . + 0 ID=cds-MCY7217915.1;Parent=gene-MK542_07005;Dbxref=NCBI_GP:MCY7217915.1;Name=MCY7217915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386237.1;locus_tag=MK542_07005;product=VOC family protein;protein_id=MCY7217915.1;transl_table=11 JAKUZA010000039.1 Genbank gene 15580 16173 . + . ID=gene-MK542_07010;Name=MK542_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07010 JAKUZA010000039.1 Protein Homology CDS 15580 16173 . + 0 ID=cds-MCY7217916.1;Parent=gene-MK542_07010;Dbxref=NCBI_GP:MCY7217916.1;Name=MCY7217916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837300.1;locus_tag=MK542_07010;product=helix-turn-helix domain-containing protein;protein_id=MCY7217916.1;transl_table=11 JAKUZA010000039.1 Genbank gene 16199 16828 . - . ID=gene-MK542_07015;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=MK542_07015 JAKUZA010000039.1 Protein Homology CDS 16199 16828 . - 0 ID=cds-MCY7217917.1;Parent=gene-MK542_07015;Dbxref=NCBI_GP:MCY7217917.1;Name=MCY7217917.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073481.1;locus_tag=MK542_07015;product=endonuclease III;protein_id=MCY7217917.1;transl_table=11 JAKUZA010000039.1 Genbank gene 16926 17279 . - . ID=gene-MK542_07020;Name=MK542_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07020 JAKUZA010000039.1 Protein Homology CDS 16926 17279 . - 0 ID=cds-MCY7217918.1;Parent=gene-MK542_07020;Dbxref=NCBI_GP:MCY7217918.1;Name=MCY7217918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193046.1;locus_tag=MK542_07020;product=arsenate reductase family protein;protein_id=MCY7217918.1;transl_table=11 ##sequence-region JAKUZA010000003.1 1 14436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000003.1 Genbank region 1 14436 . + . ID=JAKUZA010000003.1:1..14436;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000003.1 Genbank gene 1 5411 . - . ID=gene-MK542_00265;Name=MK542_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00265;partial=true;start_range=.,1 JAKUZA010000003.1 Protein Homology CDS 1 5411 . - 0 ID=cds-MCY7216624.1;Parent=gene-MK542_00265;Dbxref=NCBI_GP:MCY7216624.1;Name=MCY7216624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026507.1;locus_tag=MK542_00265;partial=true;product=Cna B-type domain-containing protein;protein_id=MCY7216624.1;start_range=.,1;transl_table=11 JAKUZA010000003.1 Genbank gene 5602 6207 . + . ID=gene-MK542_00270;Name=MK542_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00270 JAKUZA010000003.1 Protein Homology CDS 5602 6207 . + 0 ID=cds-MCY7216625.1;Parent=gene-MK542_00270;Dbxref=NCBI_GP:MCY7216625.1;Name=MCY7216625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=MK542_00270;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7216625.1;transl_table=11 JAKUZA010000003.1 Genbank gene 6274 6822 . - . ID=gene-MK542_00275;Name=MK542_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00275 JAKUZA010000003.1 Protein Homology CDS 6274 6822 . - 0 ID=cds-MCY7216626.1;Parent=gene-MK542_00275;Dbxref=NCBI_GP:MCY7216626.1;Name=MCY7216626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604266.1;locus_tag=MK542_00275;product=DUF6287 domain-containing protein;protein_id=MCY7216626.1;transl_table=11 JAKUZA010000003.1 Genbank gene 6910 7125 . - . ID=gene-MK542_00280;Name=MK542_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00280 JAKUZA010000003.1 Protein Homology CDS 6910 7125 . - 0 ID=cds-MCY7216627.1;Parent=gene-MK542_00280;Dbxref=NCBI_GP:MCY7216627.1;Name=MCY7216627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591279.1;locus_tag=MK542_00280;product=heavy-metal-associated domain-containing protein;protein_id=MCY7216627.1;transl_table=11 JAKUZA010000003.1 Genbank gene 7181 9427 . - . ID=gene-MK542_00285;Name=MK542_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00285 JAKUZA010000003.1 Protein Homology CDS 7181 9427 . - 0 ID=cds-MCY7216628.1;Parent=gene-MK542_00285;Dbxref=NCBI_GP:MCY7216628.1;Name=MCY7216628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898700.1;locus_tag=MK542_00285;product=heavy metal translocating P-type ATPase;protein_id=MCY7216628.1;transl_table=11 JAKUZA010000003.1 Genbank gene 9427 9870 . - . ID=gene-MK542_00290;Name=MK542_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00290 JAKUZA010000003.1 Protein Homology CDS 9427 9870 . - 0 ID=cds-MCY7216629.1;Parent=gene-MK542_00290;Dbxref=NCBI_GP:MCY7216629.1;Name=MCY7216629.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896837.1;locus_tag=MK542_00290;product=CopY/TcrY family copper transport repressor;protein_id=MCY7216629.1;transl_table=11 JAKUZA010000003.1 Genbank gene 10023 11525 . - . ID=gene-MK542_00295;Name=MK542_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00295 JAKUZA010000003.1 Protein Homology CDS 10023 11525 . - 0 ID=cds-MCY7216630.1;Parent=gene-MK542_00295;Dbxref=NCBI_GP:MCY7216630.1;Name=MCY7216630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724057.1;locus_tag=MK542_00295;product=zinc ABC transporter substrate-binding protein AdcA;protein_id=MCY7216630.1;transl_table=11 JAKUZA010000003.1 Genbank gene 11535 12341 . - . ID=gene-MK542_00300;Name=MK542_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00300 JAKUZA010000003.1 Protein Homology CDS 11535 12341 . - 0 ID=cds-MCY7216631.1;Parent=gene-MK542_00300;Dbxref=NCBI_GP:MCY7216631.1;Name=MCY7216631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398342.1;locus_tag=MK542_00300;product=metal ABC transporter permease;protein_id=MCY7216631.1;transl_table=11 JAKUZA010000003.1 Genbank gene 12334 13044 . - . ID=gene-MK542_00305;Name=MK542_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00305 JAKUZA010000003.1 Protein Homology CDS 12334 13044 . - 0 ID=cds-MCY7216632.1;Parent=gene-MK542_00305;Dbxref=NCBI_GP:MCY7216632.1;Name=MCY7216632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269494.1;locus_tag=MK542_00305;product=metal ABC transporter ATP-binding protein;protein_id=MCY7216632.1;transl_table=11 JAKUZA010000003.1 Genbank gene 13041 13484 . - . ID=gene-MK542_00310;Name=MK542_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00310 JAKUZA010000003.1 Protein Homology CDS 13041 13484 . - 0 ID=cds-MCY7216633.1;Parent=gene-MK542_00310;Dbxref=NCBI_GP:MCY7216633.1;Name=MCY7216633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659703.1;locus_tag=MK542_00310;product=zinc-dependent MarR family transcriptional regulator;protein_id=MCY7216633.1;transl_table=11 JAKUZA010000003.1 Genbank gene 13742 13825 . - . ID=gene-MK542_00315;Name=MK542_00315;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00315 JAKUZA010000003.1 tRNAscan-SE tRNA 13742 13825 . - . ID=rna-MK542_00315;Parent=gene-MK542_00315;anticodon=(pos:complement(13789..13791));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00315;product=tRNA-Leu JAKUZA010000003.1 tRNAscan-SE exon 13742 13825 . - . ID=exon-MK542_00315-1;Parent=rna-MK542_00315;anticodon=(pos:complement(13789..13791));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00315;product=tRNA-Leu JAKUZA010000003.1 Genbank gene 13833 13904 . - . ID=gene-MK542_00320;Name=MK542_00320;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00320 JAKUZA010000003.1 tRNAscan-SE tRNA 13833 13904 . - . ID=rna-MK542_00320;Parent=gene-MK542_00320;anticodon=(pos:complement(13870..13872));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00320;product=tRNA-Gln JAKUZA010000003.1 tRNAscan-SE exon 13833 13904 . - . ID=exon-MK542_00320-1;Parent=rna-MK542_00320;anticodon=(pos:complement(13870..13872));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00320;product=tRNA-Gln JAKUZA010000003.1 Genbank gene 13921 13993 . - . ID=gene-MK542_00325;Name=MK542_00325;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00325 JAKUZA010000003.1 tRNAscan-SE tRNA 13921 13993 . - . ID=rna-MK542_00325;Parent=gene-MK542_00325;anticodon=(pos:complement(13958..13960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00325;product=tRNA-His JAKUZA010000003.1 tRNAscan-SE exon 13921 13993 . - . ID=exon-MK542_00325-1;Parent=rna-MK542_00325;anticodon=(pos:complement(13958..13960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00325;product=tRNA-His JAKUZA010000003.1 Genbank gene 14007 14077 . - . ID=gene-MK542_00330;Name=MK542_00330;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00330 JAKUZA010000003.1 tRNAscan-SE tRNA 14007 14077 . - . ID=rna-MK542_00330;Parent=gene-MK542_00330;anticodon=(pos:complement(14043..14045));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00330;product=tRNA-Trp JAKUZA010000003.1 tRNAscan-SE exon 14007 14077 . - . ID=exon-MK542_00330-1;Parent=rna-MK542_00330;anticodon=(pos:complement(14043..14045));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00330;product=tRNA-Trp JAKUZA010000003.1 Genbank gene 14084 14164 . - . ID=gene-MK542_00335;Name=MK542_00335;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00335 JAKUZA010000003.1 tRNAscan-SE tRNA 14084 14164 . - . ID=rna-MK542_00335;Parent=gene-MK542_00335;anticodon=(pos:complement(14128..14130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00335;product=tRNA-Tyr JAKUZA010000003.1 tRNAscan-SE exon 14084 14164 . - . ID=exon-MK542_00335-1;Parent=rna-MK542_00335;anticodon=(pos:complement(14128..14130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00335;product=tRNA-Tyr JAKUZA010000003.1 Genbank gene 14181 14253 . - . ID=gene-MK542_00340;Name=MK542_00340;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00340 JAKUZA010000003.1 tRNAscan-SE tRNA 14181 14253 . - . ID=rna-MK542_00340;Parent=gene-MK542_00340;anticodon=(pos:complement(14218..14220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00340;product=tRNA-Phe JAKUZA010000003.1 tRNAscan-SE exon 14181 14253 . - . ID=exon-MK542_00340-1;Parent=rna-MK542_00340;anticodon=(pos:complement(14218..14220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00340;product=tRNA-Phe JAKUZA010000003.1 Genbank gene 14258 14331 . - . ID=gene-MK542_00345;Name=MK542_00345;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00345 JAKUZA010000003.1 tRNAscan-SE tRNA 14258 14331 . - . ID=rna-MK542_00345;Parent=gene-MK542_00345;anticodon=(pos:complement(14295..14297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00345;product=tRNA-Met JAKUZA010000003.1 tRNAscan-SE exon 14258 14331 . - . ID=exon-MK542_00345-1;Parent=rna-MK542_00345;anticodon=(pos:complement(14295..14297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00345;product=tRNA-Met JAKUZA010000003.1 Genbank gene 14345 14434 . - . ID=gene-MK542_00350;Name=MK542_00350;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00350 JAKUZA010000003.1 tRNAscan-SE tRNA 14345 14434 . - . ID=rna-MK542_00350;Parent=gene-MK542_00350;anticodon=(pos:complement(14396..14398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00350;product=tRNA-Ser JAKUZA010000003.1 tRNAscan-SE exon 14345 14434 . - . ID=exon-MK542_00350-1;Parent=rna-MK542_00350;anticodon=(pos:complement(14396..14398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00350;product=tRNA-Ser ##sequence-region JAKUZA010000040.1 1 39788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000040.1 Genbank region 1 39788 . + . ID=JAKUZA010000040.1:1..39788;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000040.1 Genbank gene 519 1427 . + . ID=gene-MK542_07025;Name=MK542_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07025 JAKUZA010000040.1 Protein Homology CDS 519 1427 . + 0 ID=cds-MCY7217919.1;Parent=gene-MK542_07025;Dbxref=NCBI_GP:MCY7217919.1;Name=MCY7217919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590463.1;locus_tag=MK542_07025;product=LysR family transcriptional regulator;protein_id=MCY7217919.1;transl_table=11 JAKUZA010000040.1 Genbank gene 1424 1885 . + . ID=gene-MK542_07030;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=MK542_07030 JAKUZA010000040.1 Protein Homology CDS 1424 1885 . + 0 ID=cds-MCY7217920.1;Parent=gene-MK542_07030;Dbxref=NCBI_GP:MCY7217920.1;Name=MCY7217920.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605093.1;locus_tag=MK542_07030;product=signal peptidase II;protein_id=MCY7217920.1;transl_table=11 JAKUZA010000040.1 Genbank gene 1875 2777 . + . ID=gene-MK542_07035;Name=MK542_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07035 JAKUZA010000040.1 Protein Homology CDS 1875 2777 . + 0 ID=cds-MCY7217921.1;Parent=gene-MK542_07035;Dbxref=NCBI_GP:MCY7217921.1;Name=MCY7217921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930308.1;locus_tag=MK542_07035;product=RluA family pseudouridine synthase;protein_id=MCY7217921.1;transl_table=11 JAKUZA010000040.1 Genbank gene 2914 4023 . + . ID=gene-MK542_07040;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=MK542_07040 JAKUZA010000040.1 Protein Homology CDS 2914 4023 . + 0 ID=cds-MCY7217922.1;Parent=gene-MK542_07040;Dbxref=NCBI_GP:MCY7217922.1;Name=MCY7217922.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875748.1;locus_tag=MK542_07040;product=glutamate 5-kinase;protein_id=MCY7217922.1;transl_table=11 JAKUZA010000040.1 Genbank gene 4150 5412 . + . ID=gene-MK542_07045;Name=MK542_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07045 JAKUZA010000040.1 Protein Homology CDS 4150 5412 . + 0 ID=cds-MCY7217923.1;Parent=gene-MK542_07045;Dbxref=NCBI_GP:MCY7217923.1;Name=MCY7217923.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897657.1;locus_tag=MK542_07045;product=glutamate-5-semialdehyde dehydrogenase;protein_id=MCY7217923.1;transl_table=11 JAKUZA010000040.1 Genbank gene 5415 6218 . + . ID=gene-MK542_07050;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=MK542_07050 JAKUZA010000040.1 Protein Homology CDS 5415 6218 . + 0 ID=cds-MCY7217924.1;Parent=gene-MK542_07050;Dbxref=NCBI_GP:MCY7217924.1;Name=MCY7217924.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909841.1;locus_tag=MK542_07050;product=pyrroline-5-carboxylate reductase;protein_id=MCY7217924.1;transl_table=11 JAKUZA010000040.1 Genbank gene 6357 7487 . + . ID=gene-MK542_07055;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=MK542_07055 JAKUZA010000040.1 Protein Homology CDS 6357 7487 . + 0 ID=cds-MCY7217925.1;Parent=gene-MK542_07055;Dbxref=NCBI_GP:MCY7217925.1;Name=MCY7217925.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660414.1;locus_tag=MK542_07055;product=radical SAM family heme chaperone HemW;protein_id=MCY7217925.1;transl_table=11 JAKUZA010000040.1 Genbank gene 7491 8231 . + . ID=gene-MK542_07060;Name=MK542_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07060 JAKUZA010000040.1 Protein Homology CDS 7491 8231 . + 0 ID=cds-MCY7217926.1;Parent=gene-MK542_07060;Dbxref=NCBI_GP:MCY7217926.1;Name=MCY7217926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191406.1;locus_tag=MK542_07060;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=MCY7217926.1;transl_table=11 JAKUZA010000040.1 Genbank gene 8243 9013 . + . ID=gene-MK542_07065;Name=MK542_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07065 JAKUZA010000040.1 Protein Homology CDS 8243 9013 . + 0 ID=cds-MCY7217927.1;Parent=gene-MK542_07065;Dbxref=NCBI_GP:MCY7217927.1;Name=MCY7217927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933878.1;locus_tag=MK542_07065;product=TIGR01457 family HAD-type hydrolase;protein_id=MCY7217927.1;transl_table=11 JAKUZA010000040.1 Genbank gene 9006 9635 . + . ID=gene-MK542_07070;Name=MK542_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07070 JAKUZA010000040.1 Protein Homology CDS 9006 9635 . + 0 ID=cds-MCY7217928.1;Parent=gene-MK542_07070;Dbxref=NCBI_GP:MCY7217928.1;Name=MCY7217928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924875.1;locus_tag=MK542_07070;product=TIGR01906 family membrane protein;protein_id=MCY7217928.1;transl_table=11 JAKUZA010000040.1 Genbank gene 9649 10620 . + . ID=gene-MK542_07075;Name=MK542_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07075 JAKUZA010000040.1 Protein Homology CDS 9649 10620 . + 0 ID=cds-MCY7217929.1;Parent=gene-MK542_07075;Dbxref=NCBI_GP:MCY7217929.1;Name=MCY7217929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590477.1;locus_tag=MK542_07075;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217929.1;transl_table=11 JAKUZA010000040.1 Genbank gene 10771 11514 . + . ID=gene-MK542_07080;Name=MK542_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07080 JAKUZA010000040.1 Protein Homology CDS 10771 11514 . + 0 ID=cds-MCY7217930.1;Parent=gene-MK542_07080;Dbxref=NCBI_GP:MCY7217930.1;Name=MCY7217930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605105.1;locus_tag=MK542_07080;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCY7217930.1;transl_table=11 JAKUZA010000040.1 Genbank gene 11511 12422 . + . ID=gene-MK542_07085;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=MK542_07085 JAKUZA010000040.1 Protein Homology CDS 11511 12422 . + 0 ID=cds-MCY7217931.1;Parent=gene-MK542_07085;Dbxref=NCBI_GP:MCY7217931.1;Name=MCY7217931.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605104.1;locus_tag=MK542_07085;product=1-phosphofructokinase;protein_id=MCY7217931.1;transl_table=11 JAKUZA010000040.1 Genbank gene 12419 14380 . + . ID=gene-MK542_07090;Name=MK542_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07090 JAKUZA010000040.1 Protein Homology CDS 12419 14380 . + 0 ID=cds-MCY7217932.1;Parent=gene-MK542_07090;Dbxref=NCBI_GP:MCY7217932.1;Name=MCY7217932.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187058.1;locus_tag=MK542_07090;product=fructose-specific PTS transporter subunit EIIC;protein_id=MCY7217932.1;transl_table=11 JAKUZA010000040.1 Genbank gene 14521 14895 . + . ID=gene-MK542_07095;Name=MK542_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07095 JAKUZA010000040.1 Protein Homology CDS 14521 14895 . + 0 ID=cds-MCY7217933.1;Parent=gene-MK542_07095;Dbxref=NCBI_GP:MCY7217933.1;Name=MCY7217933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050081.1;locus_tag=MK542_07095;product=DUF1149 family protein;protein_id=MCY7217933.1;transl_table=11 JAKUZA010000040.1 Genbank gene 14898 15746 . + . ID=gene-MK542_07100;Name=MK542_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07100 JAKUZA010000040.1 Protein Homology CDS 14898 15746 . + 0 ID=cds-MCY7217934.1;Parent=gene-MK542_07100;Dbxref=NCBI_GP:MCY7217934.1;Name=MCY7217934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933866.1;locus_tag=MK542_07100;product=DegV family protein;protein_id=MCY7217934.1;transl_table=11 JAKUZA010000040.1 Genbank gene 15794 16561 . + . ID=gene-MK542_07105;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=MK542_07105 JAKUZA010000040.1 Protein Homology CDS 15794 16561 . + 0 ID=cds-MCY7217935.1;Parent=gene-MK542_07105;Dbxref=NCBI_GP:MCY7217935.1;Name=MCY7217935.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897644.1;locus_tag=MK542_07105;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=MCY7217935.1;transl_table=11 JAKUZA010000040.1 Genbank gene 16558 17763 . + . ID=gene-MK542_07110;Name=MK542_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07110 JAKUZA010000040.1 Protein Homology CDS 16558 17763 . + 0 ID=cds-MCY7217936.1;Parent=gene-MK542_07110;Dbxref=NCBI_GP:MCY7217936.1;Name=MCY7217936.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605098.1;locus_tag=MK542_07110;product=CCA tRNA nucleotidyltransferase;protein_id=MCY7217936.1;transl_table=11 JAKUZA010000040.1 Genbank gene 17760 19625 . + . ID=gene-MK542_07115;Name=MK542_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07115 JAKUZA010000040.1 Protein Homology CDS 17760 19625 . + 0 ID=cds-MCY7217937.1;Parent=gene-MK542_07115;Dbxref=NCBI_GP:MCY7217937.1;Name=MCY7217937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605097.1;locus_tag=MK542_07115;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MCY7217937.1;transl_table=11 JAKUZA010000040.1 Genbank gene 19676 20533 . + . ID=gene-MK542_07120;Name=MK542_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07120 JAKUZA010000040.1 Protein Homology CDS 19676 20533 . + 0 ID=cds-MCY7217938.1;Parent=gene-MK542_07120;Dbxref=NCBI_GP:MCY7217938.1;Name=MCY7217938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924914.1;locus_tag=MK542_07120;product=GNAT family N-acetyltransferase;protein_id=MCY7217938.1;transl_table=11 JAKUZA010000040.1 Genbank gene 20583 21497 . + . ID=gene-MK542_07125;Name=MK542_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07125 JAKUZA010000040.1 Protein Homology CDS 20583 21497 . + 0 ID=cds-MCY7217939.1;Parent=gene-MK542_07125;Dbxref=NCBI_GP:MCY7217939.1;Name=MCY7217939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605095.1;locus_tag=MK542_07125;product=TDT family transporter;protein_id=MCY7217939.1;transl_table=11 JAKUZA010000040.1 Genbank pseudogene 22207 24489 . + . ID=gene-MK542_07130;Name=MK542_07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07130;pseudo=true JAKUZA010000040.1 Protein Homology CDS 22207 24489 . + 0 ID=cds-MK542_07130;Parent=gene-MK542_07130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024488.2;locus_tag=MK542_07130;product=exo-alpha-sialidase;pseudo=true;transl_table=11 JAKUZA010000040.1 Genbank pseudogene 25045 29742 . + . ID=gene-MK542_07135;Name=MK542_07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07135;pseudo=true JAKUZA010000040.1 Protein Homology CDS 25045 29742 . + 0 ID=cds-MK542_07135;Parent=gene-MK542_07135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0033926;gbkey=CDS;go_function=glycopeptide alpha-N-acetylgalactosaminidase activity|0033926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361150.1;locus_tag=MK542_07135;product=SpGH101 family endo-alpha-N-acetylgalactosaminidase;pseudo=true;transl_table=11 JAKUZA010000040.1 Genbank gene 29827 31053 . + . ID=gene-MK542_07140;Name=MK542_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07140 JAKUZA010000040.1 Protein Homology CDS 29827 31053 . + 0 ID=cds-MCY7217940.1;Parent=gene-MK542_07140;Dbxref=NCBI_GP:MCY7217940.1;Name=MCY7217940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019142.2;locus_tag=MK542_07140;product=G5 domain-containing protein;protein_id=MCY7217940.1;transl_table=11 JAKUZA010000040.1 Genbank gene 31288 39788 . + . ID=gene-MK542_07145;Name=MK542_07145;end_range=39788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07145;partial=true JAKUZA010000040.1 Protein Homology CDS 31288 39788 . + 0 ID=cds-MCY7217941.1;Parent=gene-MK542_07145;Dbxref=NCBI_GP:MCY7217941.1;Name=MCY7217941.1;end_range=39788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373810.1;locus_tag=MK542_07145;partial=true;product=beta-N-acetylglucosaminidase domain-containing protein;protein_id=MCY7217941.1;transl_table=11 ##sequence-region JAKUZA010000041.1 1 9315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000041.1 Genbank region 1 9315 . + . ID=JAKUZA010000041.1:1..9315;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000041.1 Genbank gene 1 381 . + . ID=gene-MK542_07150;Name=MK542_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07150;partial=true;start_range=.,1 JAKUZA010000041.1 Protein Homology CDS 1 381 . + 0 ID=cds-MCY7217942.1;Parent=gene-MK542_07150;Dbxref=NCBI_GP:MCY7217942.1;Name=MCY7217942.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000834569.1;locus_tag=MK542_07150;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MCY7217942.1;start_range=.,1;transl_table=11 JAKUZA010000041.1 Genbank gene 797 1543 . + . ID=gene-MK542_07155;Name=MK542_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07155 JAKUZA010000041.1 Protein Homology CDS 797 1543 . + 0 ID=cds-MCY7217943.1;Parent=gene-MK542_07155;Dbxref=NCBI_GP:MCY7217943.1;Name=MCY7217943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932812.1;locus_tag=MK542_07155;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCY7217943.1;transl_table=11 JAKUZA010000041.1 Genbank gene 1826 2302 . + . ID=gene-MK542_07160;Name=MK542_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07160 JAKUZA010000041.1 Protein Homology CDS 1826 2302 . + 0 ID=cds-MCY7217944.1;Parent=gene-MK542_07160;Dbxref=NCBI_GP:MCY7217944.1;Name=MCY7217944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921872.1;locus_tag=MK542_07160;product=PTS sugar transporter subunit IIA;protein_id=MCY7217944.1;transl_table=11 JAKUZA010000041.1 Genbank gene 2323 2628 . + . ID=gene-MK542_07165;Name=MK542_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07165 JAKUZA010000041.1 Protein Homology CDS 2323 2628 . + 0 ID=cds-MCY7217945.1;Parent=gene-MK542_07165;Dbxref=NCBI_GP:MCY7217945.1;Name=MCY7217945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590575.1;locus_tag=MK542_07165;product=PTS sugar transporter subunit IIB;protein_id=MCY7217945.1;transl_table=11 JAKUZA010000041.1 Genbank gene 2663 4138 . + . ID=gene-MK542_07170;Name=MK542_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07170 JAKUZA010000041.1 Protein Homology CDS 2663 4138 . + 0 ID=cds-MCY7217946.1;Parent=gene-MK542_07170;Dbxref=NCBI_GP:MCY7217946.1;Name=MCY7217946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338710.1;locus_tag=MK542_07170;product=PTS galactitol transporter subunit IIC;protein_id=MCY7217946.1;transl_table=11 JAKUZA010000041.1 Genbank gene 4488 4883 . + . ID=gene-MK542_07175;Name=MK542_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07175 JAKUZA010000041.1 Protein Homology CDS 4488 4883 . + 0 ID=cds-MCY7217947.1;Parent=gene-MK542_07175;Dbxref=NCBI_GP:MCY7217947.1;Name=MCY7217947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282444.1;locus_tag=MK542_07175;product=single-stranded DNA-binding protein;protein_id=MCY7217947.1;transl_table=11 JAKUZA010000041.1 Genbank gene 5020 6006 . + . ID=gene-MK542_07180;Name=MK542_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07180 JAKUZA010000041.1 Protein Homology CDS 5020 6006 . + 0 ID=cds-MCY7217948.1;Parent=gene-MK542_07180;Dbxref=NCBI_GP:MCY7217948.1;Name=MCY7217948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190220.1;locus_tag=MK542_07180;product=substrate-binding domain-containing protein;protein_id=MCY7217948.1;transl_table=11 JAKUZA010000041.1 Genbank gene 6006 7319 . + . ID=gene-MK542_07185;Name=MK542_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07185 JAKUZA010000041.1 Protein Homology CDS 6006 7319 . + 0 ID=cds-MCY7217949.1;Parent=gene-MK542_07185;Dbxref=NCBI_GP:MCY7217949.1;Name=MCY7217949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907421.1;locus_tag=MK542_07185;product=sensor histidine kinase;protein_id=MCY7217949.1;transl_table=11 JAKUZA010000041.1 Genbank gene 7312 7995 . + . ID=gene-MK542_07190;Name=MK542_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07190 JAKUZA010000041.1 Protein Homology CDS 7312 7995 . + 0 ID=cds-MCY7217950.1;Parent=gene-MK542_07190;Dbxref=NCBI_GP:MCY7217950.1;Name=MCY7217950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189014.1;locus_tag=MK542_07190;product=response regulator transcription factor;protein_id=MCY7217950.1;transl_table=11 JAKUZA010000041.1 Genbank gene 7992 9272 . + . ID=gene-MK542_07195;Name=MK542_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07195 JAKUZA010000041.1 Protein Homology CDS 7992 9272 . + 0 ID=cds-MCY7217951.1;Parent=gene-MK542_07195;Dbxref=NCBI_GP:MCY7217951.1;Name=MCY7217951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591583.1;locus_tag=MK542_07195;product=extracellular solute-binding protein;protein_id=MCY7217951.1;transl_table=11 ##sequence-region JAKUZA010000042.1 1 14315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000042.1 Genbank region 1 14315 . + . ID=JAKUZA010000042.1:1..14315;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000042.1 Genbank gene 277 1101 . - . ID=gene-MK542_07200;Name=MK542_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07200 JAKUZA010000042.1 Protein Homology CDS 277 1101 . - 0 ID=cds-MCY7217952.1;Parent=gene-MK542_07200;Dbxref=NCBI_GP:MCY7217952.1;Name=MCY7217952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037372.2;locus_tag=MK542_07200;product=SHIRT domain-containing protein;protein_id=MCY7217952.1;transl_table=11 JAKUZA010000042.1 Genbank gene 1538 2527 . + . ID=gene-MK542_07205;Name=MK542_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07205 JAKUZA010000042.1 GeneMarkS-2+ CDS 1538 2527 . + 0 ID=cds-MCY7217953.1;Parent=gene-MK542_07205;Dbxref=NCBI_GP:MCY7217953.1;Name=MCY7217953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07205;product=hypothetical protein;protein_id=MCY7217953.1;transl_table=11 JAKUZA010000042.1 Genbank pseudogene 2651 8521 . + . ID=gene-MK542_07210;Name=MK542_07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07210;pseudo=true JAKUZA010000042.1 Protein Homology CDS 2651 8521 . + 0 ID=cds-MK542_07210;Parent=gene-MK542_07210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019962.2;locus_tag=MK542_07210;product=MucBP domain-containing protein;pseudo=true;transl_table=11 JAKUZA010000042.1 Genbank gene 8729 8800 . + . ID=gene-MK542_07215;Name=MK542_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07215 JAKUZA010000042.1 Protein Homology CDS 8729 8800 . + 0 ID=cds-MCY7217954.1;Parent=gene-MK542_07215;Dbxref=NCBI_GP:MCY7217954.1;Name=MCY7217954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012948.2;locus_tag=MK542_07215;product=hypothetical protein;protein_id=MCY7217954.1;transl_table=11 JAKUZA010000042.1 Genbank gene 9173 9955 . + . ID=gene-MK542_07220;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=MK542_07220 JAKUZA010000042.1 Protein Homology CDS 9173 9955 . + 0 ID=cds-MCY7217955.1;Parent=gene-MK542_07220;Dbxref=NCBI_GP:MCY7217955.1;Name=MCY7217955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268478.1;locus_tag=MK542_07220;product=30S ribosomal protein S2;protein_id=MCY7217955.1;transl_table=11 JAKUZA010000042.1 Genbank gene 10037 11080 . + . ID=gene-MK542_07225;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=MK542_07225 JAKUZA010000042.1 Protein Homology CDS 10037 11080 . + 0 ID=cds-MCY7217956.1;Parent=gene-MK542_07225;Dbxref=NCBI_GP:MCY7217956.1;Name=MCY7217956.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894014.1;locus_tag=MK542_07225;product=translation elongation factor Ts;protein_id=MCY7217956.1;transl_table=11 JAKUZA010000042.1 Genbank gene 11635 12354 . + . ID=gene-MK542_07230;Name=MK542_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07230 JAKUZA010000042.1 Protein Homology CDS 11635 12354 . + 0 ID=cds-MCY7217957.1;Parent=gene-MK542_07230;Dbxref=NCBI_GP:MCY7217957.1;Name=MCY7217957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027129.1;locus_tag=MK542_07230;product=hypothetical protein;protein_id=MCY7217957.1;transl_table=11 JAKUZA010000042.1 Genbank gene 12367 13197 . + . ID=gene-MK542_07235;Name=MK542_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07235 JAKUZA010000042.1 Protein Homology CDS 12367 13197 . + 0 ID=cds-MCY7217958.1;Parent=gene-MK542_07235;Dbxref=NCBI_GP:MCY7217958.1;Name=MCY7217958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070820.1;locus_tag=MK542_07235;product=hypothetical protein;protein_id=MCY7217958.1;transl_table=11 JAKUZA010000042.1 Genbank pseudogene 13341 14315 . - . ID=gene-MK542_07240;Name=MK542_07240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07240;pseudo=true JAKUZA010000042.1 Protein Homology CDS 13341 14315 . - 0 ID=cds-MK542_07240;Parent=gene-MK542_07240;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436790.1;locus_tag=MK542_07240;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000043.1 1 3588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000043.1 Genbank region 1 3588 . + . ID=JAKUZA010000043.1:1..3588;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000043.1 Genbank gene 156 1730 . - . ID=gene-MK542_07245;Name=MK542_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07245 JAKUZA010000043.1 Protein Homology CDS 156 1730 . - 0 ID=cds-MCY7217959.1;Parent=gene-MK542_07245;Dbxref=NCBI_GP:MCY7217959.1;Name=MCY7217959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713065.1;locus_tag=MK542_07245;product=DEAD/DEAH box helicase;protein_id=MCY7217959.1;transl_table=11 JAKUZA010000043.1 Genbank gene 2432 2887 . - . ID=gene-MK542_07250;Name=MK542_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07250 JAKUZA010000043.1 Protein Homology CDS 2432 2887 . - 0 ID=cds-MCY7217960.1;Parent=gene-MK542_07250;Dbxref=NCBI_GP:MCY7217960.1;Name=MCY7217960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917416.1;locus_tag=MK542_07250;product=SP_0198 family lipoprotein;protein_id=MCY7217960.1;transl_table=11 ##sequence-region JAKUZA010000044.1 1 78705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000044.1 Genbank region 1 78705 . + . ID=JAKUZA010000044.1:1..78705;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000044.1 Genbank gene 101 1339 . - . ID=gene-MK542_07255;Name=MK542_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07255 JAKUZA010000044.1 Protein Homology CDS 101 1339 . - 0 ID=cds-MCY7217961.1;Parent=gene-MK542_07255;Dbxref=NCBI_GP:MCY7217961.1;Name=MCY7217961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604926.1;locus_tag=MK542_07255;product=site-specific integrase;protein_id=MCY7217961.1;transl_table=11 JAKUZA010000044.1 Genbank gene 1339 1533 . - . ID=gene-MK542_07260;Name=MK542_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07260 JAKUZA010000044.1 Protein Homology CDS 1339 1533 . - 0 ID=cds-MCY7217962.1;Parent=gene-MK542_07260;Dbxref=NCBI_GP:MCY7217962.1;Name=MCY7217962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604927.1;locus_tag=MK542_07260;product=DUF3173 domain-containing protein;protein_id=MCY7217962.1;transl_table=11 JAKUZA010000044.1 Genbank gene 1798 3252 . - . ID=gene-MK542_07265;Name=MK542_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07265 JAKUZA010000044.1 GeneMarkS-2+ CDS 1798 3252 . - 0 ID=cds-MCY7217963.1;Parent=gene-MK542_07265;Dbxref=NCBI_GP:MCY7217963.1;Name=MCY7217963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07265;product=hypothetical protein;protein_id=MCY7217963.1;transl_table=11 JAKUZA010000044.1 Genbank gene 3491 3799 . - . ID=gene-MK542_07270;Name=MK542_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07270 JAKUZA010000044.1 Protein Homology CDS 3491 3799 . - 0 ID=cds-MCY7217964.1;Parent=gene-MK542_07270;Dbxref=NCBI_GP:MCY7217964.1;Name=MCY7217964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689631.1;locus_tag=MK542_07270;product=helix-turn-helix domain-containing protein;protein_id=MCY7217964.1;transl_table=11 JAKUZA010000044.1 Genbank gene 3982 8997 . + . ID=gene-MK542_07275;Name=MK542_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07275 JAKUZA010000044.1 Protein Homology CDS 3982 8997 . + 0 ID=cds-MCY7217965.1;Parent=gene-MK542_07275;Dbxref=NCBI_GP:MCY7217965.1;Name=MCY7217965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04320.1;locus_tag=MK542_07275;product=SEC10/PgrA surface exclusion domain-containing protein;protein_id=MCY7217965.1;transl_table=11 JAKUZA010000044.1 Genbank gene 9099 9376 . + . ID=gene-MK542_07280;Name=MK542_07280;end_range=9376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07280;partial=true JAKUZA010000044.1 GeneMarkS-2+ CDS 9099 9376 . + 0 ID=cds-MCY7217966.1;Parent=gene-MK542_07280;Dbxref=NCBI_GP:MCY7217966.1;Name=MCY7217966.1;end_range=9376,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07280;partial=true;product=hypothetical protein;protein_id=MCY7217966.1;transl_table=11 JAKUZA010000044.1 Genbank gene 10300 10941 . + . ID=gene-MK542_07285;Name=MK542_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07285 JAKUZA010000044.1 GeneMarkS-2+ CDS 10300 10941 . + 0 ID=cds-MCY7217967.1;Parent=gene-MK542_07285;Dbxref=NCBI_GP:MCY7217967.1;Name=MCY7217967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07285;product=hypothetical protein;protein_id=MCY7217967.1;transl_table=11 JAKUZA010000044.1 Genbank gene 10959 11447 . + . ID=gene-MK542_07290;Name=MK542_07290;end_range=11447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07290;partial=true JAKUZA010000044.1 GeneMarkS-2+ CDS 10959 11447 . + 0 ID=cds-MCY7217968.1;Parent=gene-MK542_07290;Dbxref=NCBI_GP:MCY7217968.1;Name=MCY7217968.1;end_range=11447,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07290;partial=true;product=hypothetical protein;protein_id=MCY7217968.1;transl_table=11 JAKUZA010000044.1 Genbank gene 11524 11708 . + . ID=gene-MK542_07295;Name=MK542_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07295;partial=true;start_range=.,11524 JAKUZA010000044.1 GeneMarkS-2+ CDS 11524 11708 . + 2 ID=cds-MCY7217969.1;Parent=gene-MK542_07295;Dbxref=NCBI_GP:MCY7217969.1;Name=MCY7217969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07295;partial=true;product=hypothetical protein;protein_id=MCY7217969.1;start_range=.,11524;transl_table=11 JAKUZA010000044.1 Genbank gene 11893 12903 . - . ID=gene-MK542_07300;Name=MK542_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07300 JAKUZA010000044.1 Protein Homology CDS 11893 12903 . - 0 ID=cds-MCY7217970.1;Parent=gene-MK542_07300;Dbxref=NCBI_GP:MCY7217970.1;Name=MCY7217970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149442.1;locus_tag=MK542_07300;product=site-specific integrase;protein_id=MCY7217970.1;transl_table=11 JAKUZA010000044.1 Genbank gene 14531 15142 . - . ID=gene-MK542_07305;Name=MK542_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07305 JAKUZA010000044.1 Protein Homology CDS 14531 15142 . - 0 ID=cds-MCY7217971.1;Parent=gene-MK542_07305;Dbxref=NCBI_GP:MCY7217971.1;Name=MCY7217971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595241.1;locus_tag=MK542_07305;product=Fic family protein;protein_id=MCY7217971.1;transl_table=11 JAKUZA010000044.1 Genbank gene 15135 15323 . - . ID=gene-MK542_07310;Name=MK542_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07310 JAKUZA010000044.1 Protein Homology CDS 15135 15323 . - 0 ID=cds-MCY7217972.1;Parent=gene-MK542_07310;Dbxref=NCBI_GP:MCY7217972.1;Name=MCY7217972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713950.1;locus_tag=MK542_07310;product=hypothetical protein;protein_id=MCY7217972.1;transl_table=11 JAKUZA010000044.1 Genbank gene 15471 15971 . + . ID=gene-MK542_07315;Name=MK542_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07315 JAKUZA010000044.1 Protein Homology CDS 15471 15971 . + 0 ID=cds-MCY7217973.1;Parent=gene-MK542_07315;Dbxref=NCBI_GP:MCY7217973.1;Name=MCY7217973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433932.1;locus_tag=MK542_07315;product=hypothetical protein;protein_id=MCY7217973.1;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 16459 16925 . + . ID=gene-MK542_07320;Name=MK542_07320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07320;pseudo=true JAKUZA010000044.1 Protein Homology CDS 16459 16925 . + 1 ID=cds-MK542_07320;Parent=gene-MK542_07320;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191693.1;locus_tag=MK542_07320;product=transposase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 17106 17384 . + . ID=gene-MK542_07325;Name=MK542_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07325 JAKUZA010000044.1 Protein Homology CDS 17106 17384 . + 0 ID=cds-MCY7217974.1;Parent=gene-MK542_07325;Dbxref=NCBI_GP:MCY7217974.1;Name=MCY7217974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003075836.1;locus_tag=MK542_07325;product=DUF6110 family protein;protein_id=MCY7217974.1;transl_table=11 JAKUZA010000044.1 Genbank gene 17386 17802 . + . ID=gene-MK542_07330;Name=MK542_07330;end_range=17802,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07330;partial=true JAKUZA010000044.1 Protein Homology CDS 17386 17802 . + 0 ID=cds-MCY7217975.1;Parent=gene-MK542_07330;Dbxref=NCBI_GP:MCY7217975.1;Name=MCY7217975.1;end_range=17802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008803.1;locus_tag=MK542_07330;partial=true;product=heavy metal translocating P-type ATPase;protein_id=MCY7217975.1;transl_table=11 JAKUZA010000044.1 Genbank gene 17864 18037 . + . ID=gene-MK542_07335;Name=MK542_07335;end_range=18037,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07335;partial=true;start_range=.,17864 JAKUZA010000044.1 Protein Homology CDS 17864 18037 . + 2 ID=cds-MCY7217976.1;Parent=gene-MK542_07335;Dbxref=NCBI_GP:MCY7217976.1;Name=MCY7217976.1;end_range=18037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008803.1;locus_tag=MK542_07335;partial=true;product=ATPase;protein_id=MCY7217976.1;start_range=.,17864;transl_table=11 JAKUZA010000044.1 Genbank gene 18111 19355 . + . ID=gene-MK542_07340;Name=MK542_07340;end_range=19355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07340;partial=true;start_range=.,18111 JAKUZA010000044.1 Protein Homology CDS 18111 19355 . + 1 ID=cds-MCY7217977.1;Parent=gene-MK542_07340;Dbxref=NCBI_GP:MCY7217977.1;Name=MCY7217977.1;Ontology_term=GO:0042625;end_range=19355,.;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008803.1;locus_tag=MK542_07340;partial=true;product=heavy metal translocating P-type ATPase;protein_id=MCY7217977.1;start_range=.,18111;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 19541 20028 . - . ID=gene-MK542_07345;Name=MK542_07345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07345;pseudo=true JAKUZA010000044.1 Protein Homology CDS 19541 20028 . - 0 ID=cds-MK542_07345;Parent=gene-MK542_07345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436790.1;locus_tag=MK542_07345;product=transposase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 20526 20839 . + . ID=gene-MK542_07350;Name=MK542_07350;end_range=20839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07350;partial=true JAKUZA010000044.1 Protein Homology CDS 20526 20839 . + 0 ID=cds-MCY7217978.1;Parent=gene-MK542_07350;Dbxref=NCBI_GP:MCY7217978.1;Name=MCY7217978.1;end_range=20839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126416.1;locus_tag=MK542_07350;partial=true;product=DUF389 domain-containing protein;protein_id=MCY7217978.1;transl_table=11 JAKUZA010000044.1 Genbank gene 20867 21575 . + . ID=gene-MK542_07355;Name=MK542_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07355;partial=true;start_range=.,20867 JAKUZA010000044.1 Protein Homology CDS 20867 21575 . + 1 ID=cds-MCY7217979.1;Parent=gene-MK542_07355;Dbxref=NCBI_GP:MCY7217979.1;Name=MCY7217979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126416.1;locus_tag=MK542_07355;partial=true;product=DUF389 domain-containing protein;protein_id=MCY7217979.1;start_range=.,20867;transl_table=11 JAKUZA010000044.1 Genbank gene 22402 22810 . - . ID=gene-MK542_07360;Name=MK542_07360;end_range=22810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07360;partial=true JAKUZA010000044.1 Protein Homology CDS 22402 22810 . - 1 ID=cds-MCY7217980.1;Parent=gene-MK542_07360;Dbxref=NCBI_GP:MCY7217980.1;Name=MCY7217980.1;end_range=22810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070622.1;locus_tag=MK542_07360;partial=true;product=MATE family efflux transporter;protein_id=MCY7217980.1;transl_table=11 JAKUZA010000044.1 Genbank gene 22830 23733 . - . ID=gene-MK542_07365;Name=MK542_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07365;partial=true;start_range=.,22830 JAKUZA010000044.1 Protein Homology CDS 22830 23733 . - 0 ID=cds-MCY7217981.1;Parent=gene-MK542_07365;Dbxref=NCBI_GP:MCY7217981.1;Name=MCY7217981.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057706.1;locus_tag=MK542_07365;partial=true;product=MATE family efflux transporter;protein_id=MCY7217981.1;start_range=.,22830;transl_table=11 JAKUZA010000044.1 Genbank gene 23738 24331 . - . ID=gene-MK542_07370;Name=MK542_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07370 JAKUZA010000044.1 Protein Homology CDS 23738 24331 . - 0 ID=cds-MCY7217982.1;Parent=gene-MK542_07370;Dbxref=NCBI_GP:MCY7217982.1;Name=MCY7217982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070621.1;locus_tag=MK542_07370;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7217982.1;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 24955 25161 . - . ID=gene-MK542_07375;Name=MK542_07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07375;pseudo=true JAKUZA010000044.1 Protein Homology CDS 24955 25161 . - 0 ID=cds-MK542_07375;Parent=gene-MK542_07375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191693.1;locus_tag=MK542_07375;product=transposase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 25342 26808 . + . ID=gene-MK542_07380;Name=MK542_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07380 JAKUZA010000044.1 Protein Homology CDS 25342 26808 . + 0 ID=cds-MCY7217983.1;Parent=gene-MK542_07380;Dbxref=NCBI_GP:MCY7217983.1;Name=MCY7217983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937371.1;locus_tag=MK542_07380;product=DUF5677 domain-containing protein;protein_id=MCY7217983.1;transl_table=11 JAKUZA010000044.1 Genbank gene 26802 27872 . + . ID=gene-MK542_07385;Name=MK542_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07385 JAKUZA010000044.1 Protein Homology CDS 26802 27872 . + 0 ID=cds-MCY7217984.1;Parent=gene-MK542_07385;Dbxref=NCBI_GP:MCY7217984.1;Name=MCY7217984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887067.1;locus_tag=MK542_07385;product=hypothetical protein;protein_id=MCY7217984.1;transl_table=11 JAKUZA010000044.1 Genbank gene 28228 29787 . - . ID=gene-MK542_07390;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=MK542_07390 JAKUZA010000044.1 Protein Homology CDS 28228 29787 . - 0 ID=cds-MCY7217985.1;Parent=gene-MK542_07390;Dbxref=NCBI_GP:MCY7217985.1;Name=MCY7217985.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909747.1;locus_tag=MK542_07390;product=glutamine-hydrolyzing GMP synthase;protein_id=MCY7217985.1;transl_table=11 JAKUZA010000044.1 Genbank gene 30023 30721 . + . ID=gene-MK542_07395;Name=MK542_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07395 JAKUZA010000044.1 Protein Homology CDS 30023 30721 . + 0 ID=cds-MCY7217986.1;Parent=gene-MK542_07395;Dbxref=NCBI_GP:MCY7217986.1;Name=MCY7217986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076949.1;locus_tag=MK542_07395;product=GntR family transcriptional regulator;protein_id=MCY7217986.1;transl_table=11 JAKUZA010000044.1 Genbank gene 30839 31171 . + . ID=gene-MK542_07400;Name=MK542_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07400 JAKUZA010000044.1 Protein Homology CDS 30839 31171 . + 0 ID=cds-MCY7217987.1;Parent=gene-MK542_07400;Dbxref=NCBI_GP:MCY7217987.1;Name=MCY7217987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637934.1;locus_tag=MK542_07400;product=putative DNA-binding protein;protein_id=MCY7217987.1;transl_table=11 JAKUZA010000044.1 Genbank gene 31227 32795 . + . ID=gene-MK542_07405;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=MK542_07405 JAKUZA010000044.1 Protein Homology CDS 31227 32795 . + 0 ID=cds-MCY7217988.1;Parent=gene-MK542_07405;Dbxref=NCBI_GP:MCY7217988.1;Name=MCY7217988.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902912.1;locus_tag=MK542_07405;product=signal recognition particle protein;protein_id=MCY7217988.1;transl_table=11 JAKUZA010000044.1 Genbank gene 32874 33650 . + . ID=gene-MK542_07410;Name=MK542_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07410 JAKUZA010000044.1 Protein Homology CDS 32874 33650 . + 0 ID=cds-MCY7217989.1;Parent=gene-MK542_07410;Dbxref=NCBI_GP:MCY7217989.1;Name=MCY7217989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909741.1;locus_tag=MK542_07410;product=alpha/beta hydrolase;protein_id=MCY7217989.1;transl_table=11 JAKUZA010000044.1 Genbank gene 33735 34478 . + . ID=gene-MK542_07415;Name=MK542_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07415 JAKUZA010000044.1 Protein Homology CDS 33735 34478 . + 0 ID=cds-MCY7217990.1;Parent=gene-MK542_07415;Dbxref=NCBI_GP:MCY7217990.1;Name=MCY7217990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145558.1;locus_tag=MK542_07415;product=CPBP family intramembrane metalloprotease;protein_id=MCY7217990.1;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 34572 34694 . + . ID=gene-MK542_07420;Name=MK542_07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07420;pseudo=true JAKUZA010000044.1 Protein Homology CDS 34572 34694 . + 0 ID=cds-MK542_07420;Parent=gene-MK542_07420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003001501.1;locus_tag=MK542_07420;product=acetylxylan esterase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 34890 35960 . + . ID=gene-MK542_07425;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=MK542_07425 JAKUZA010000044.1 Protein Homology CDS 34890 35960 . + 0 ID=cds-MCY7217991.1;Parent=gene-MK542_07425;Dbxref=NCBI_GP:MCY7217991.1;Name=MCY7217991.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817875.1;locus_tag=MK542_07425;product=tyrosine recombinase XerS;protein_id=MCY7217991.1;transl_table=11 JAKUZA010000044.1 Genbank gene 36012 38447 . - . ID=gene-MK542_07430;Name=MK542_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07430 JAKUZA010000044.1 Protein Homology CDS 36012 38447 . - 0 ID=cds-MCY7217992.1;Parent=gene-MK542_07430;Dbxref=NCBI_GP:MCY7217992.1;Name=MCY7217992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933538.1;locus_tag=MK542_07430;product=CAP domain-containing protein;protein_id=MCY7217992.1;transl_table=11 JAKUZA010000044.1 Genbank gene 38616 39347 . - . ID=gene-MK542_07435;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=MK542_07435 JAKUZA010000044.1 Protein Homology CDS 38616 39347 . - 0 ID=cds-MCY7217993.1;Parent=gene-MK542_07435;Dbxref=NCBI_GP:MCY7217993.1;Name=MCY7217993.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659498.1;locus_tag=MK542_07435;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=MCY7217993.1;transl_table=11 JAKUZA010000044.1 Genbank gene 39337 39855 . - . ID=gene-MK542_07440;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=MK542_07440 JAKUZA010000044.1 Protein Homology CDS 39337 39855 . - 0 ID=cds-MCY7217994.1;Parent=gene-MK542_07440;Dbxref=NCBI_GP:MCY7217994.1;Name=MCY7217994.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364;gbkey=CDS;gene=rimM;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900226.1;locus_tag=MK542_07440;product=ribosome maturation factor RimM;protein_id=MCY7217994.1;transl_table=11 JAKUZA010000044.1 Genbank gene 39950 40312 . - . ID=gene-MK542_07445;Name=MK542_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07445 JAKUZA010000044.1 Protein Homology CDS 39950 40312 . - 0 ID=cds-MCY7217995.1;Parent=gene-MK542_07445;Dbxref=NCBI_GP:MCY7217995.1;Name=MCY7217995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241791.1;locus_tag=MK542_07445;product=TIGR02328 family protein;protein_id=MCY7217995.1;transl_table=11 JAKUZA010000044.1 Genbank gene 40281 40700 . - . ID=gene-MK542_07450;Name=MK542_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07450 JAKUZA010000044.1 Protein Homology CDS 40281 40700 . - 0 ID=cds-MCY7217996.1;Parent=gene-MK542_07450;Dbxref=NCBI_GP:MCY7217996.1;Name=MCY7217996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435151.1;locus_tag=MK542_07450;product=YbgA family protein;protein_id=MCY7217996.1;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 40762 41362 . - . ID=gene-MK542_07455;Name=MK542_07455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07455;pseudo=true JAKUZA010000044.1 Protein Homology CDS 40762 41362 . - 0 ID=cds-MK542_07455;Parent=gene-MK542_07455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625180.1;locus_tag=MK542_07455;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 41473 42027 . - . ID=gene-MK542_07460;Name=MK542_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07460 JAKUZA010000044.1 Protein Homology CDS 41473 42027 . - 0 ID=cds-MCY7217997.1;Parent=gene-MK542_07460;Dbxref=NCBI_GP:MCY7217997.1;Name=MCY7217997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605079.1;locus_tag=MK542_07460;product=GNAT family N-acetyltransferase;protein_id=MCY7217997.1;transl_table=11 JAKUZA010000044.1 Genbank gene 42454 43254 . - . ID=gene-MK542_07465;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=MK542_07465 JAKUZA010000044.1 Protein Homology CDS 42454 43254 . - 0 ID=cds-MCY7217998.1;Parent=gene-MK542_07465;Dbxref=NCBI_GP:MCY7217998.1;Name=MCY7217998.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069088.1;locus_tag=MK542_07465;product=SDR family oxidoreductase UcpA;protein_id=MCY7217998.1;transl_table=11 JAKUZA010000044.1 Genbank gene 43492 44358 . - . ID=gene-MK542_07470;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=MK542_07470 JAKUZA010000044.1 Protein Homology CDS 43492 44358 . - 0 ID=cds-MCY7217999.1;Parent=gene-MK542_07470;Dbxref=NCBI_GP:MCY7217999.1;Name=MCY7217999.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604790.1;locus_tag=MK542_07470;product=homoserine kinase;protein_id=MCY7217999.1;transl_table=11 JAKUZA010000044.1 Genbank gene 44360 45646 . - . ID=gene-MK542_07475;Name=MK542_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07475 JAKUZA010000044.1 Protein Homology CDS 44360 45646 . - 0 ID=cds-MCY7218000.1;Parent=gene-MK542_07475;Dbxref=NCBI_GP:MCY7218000.1;Name=MCY7218000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398744.1;locus_tag=MK542_07475;product=homoserine dehydrogenase;protein_id=MCY7218000.1;transl_table=11 JAKUZA010000044.1 Genbank gene 45780 46724 . + . ID=gene-MK542_07480;Name=MK542_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07480 JAKUZA010000044.1 Protein Homology CDS 45780 46724 . + 0 ID=cds-MCY7218001.1;Parent=gene-MK542_07480;Dbxref=NCBI_GP:MCY7218001.1;Name=MCY7218001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187122.1;locus_tag=MK542_07480;product=polysaccharide deacetylase family protein;protein_id=MCY7218001.1;transl_table=11 JAKUZA010000044.1 Genbank gene 46836 47075 . - . ID=gene-MK542_07485;Name=kphA;gbkey=Gene;gene=kphA;gene_biotype=protein_coding;locus_tag=MK542_07485 JAKUZA010000044.1 Protein Homology CDS 46836 47075 . - 0 ID=cds-MCY7218002.1;Parent=gene-MK542_07485;Dbxref=NCBI_GP:MCY7218002.1;Name=MCY7218002.1;gbkey=CDS;gene=kphA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590445.1;locus_tag=MK542_07485;product=RNA-binding protein KphA;protein_id=MCY7218002.1;transl_table=11 JAKUZA010000044.1 Genbank gene 47095 47367 . - . ID=gene-MK542_07490;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=MK542_07490 JAKUZA010000044.1 Protein Homology CDS 47095 47367 . - 0 ID=cds-MCY7218003.1;Parent=gene-MK542_07490;Dbxref=NCBI_GP:MCY7218003.1;Name=MCY7218003.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=MK542_07490;product=30S ribosomal protein S16;protein_id=MCY7218003.1;transl_table=11 JAKUZA010000044.1 Genbank gene 47492 48223 . - . ID=gene-MK542_07495;Name=MK542_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07495 JAKUZA010000044.1 Protein Homology CDS 47492 48223 . - 0 ID=cds-MCY7218004.1;Parent=gene-MK542_07495;Dbxref=NCBI_GP:MCY7218004.1;Name=MCY7218004.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590449.1;locus_tag=MK542_07495;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=MCY7218004.1;transl_table=11 JAKUZA010000044.1 Genbank gene 48268 49101 . - . ID=gene-MK542_07500;Name=MK542_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07500 JAKUZA010000044.1 Protein Homology CDS 48268 49101 . - 0 ID=cds-MCY7218005.1;Parent=gene-MK542_07500;Dbxref=NCBI_GP:MCY7218005.1;Name=MCY7218005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000283.1;locus_tag=MK542_07500;product=AraC family transcriptional regulator;protein_id=MCY7218005.1;transl_table=11 JAKUZA010000044.1 Genbank gene 49262 49756 . - . ID=gene-MK542_07505;Name=MK542_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07505 JAKUZA010000044.1 Protein Homology CDS 49262 49756 . - 0 ID=cds-MCY7218006.1;Parent=gene-MK542_07505;Dbxref=NCBI_GP:MCY7218006.1;Name=MCY7218006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837045.1;locus_tag=MK542_07505;product=YkgJ family cysteine cluster protein;protein_id=MCY7218006.1;transl_table=11 JAKUZA010000044.1 Genbank gene 49853 50491 . - . ID=gene-MK542_07510;Name=MK542_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07510 JAKUZA010000044.1 Protein Homology CDS 49853 50491 . - 0 ID=cds-MCY7218007.1;Parent=gene-MK542_07510;Dbxref=NCBI_GP:MCY7218007.1;Name=MCY7218007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930704.1;locus_tag=MK542_07510;product=hypothetical protein;protein_id=MCY7218007.1;transl_table=11 JAKUZA010000044.1 Genbank gene 51431 53254 . - . ID=gene-MK542_07515;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=MK542_07515 JAKUZA010000044.1 Protein Homology CDS 51431 53254 . - 0 ID=cds-MCY7218008.1;Parent=gene-MK542_07515;Dbxref=NCBI_GP:MCY7218008.1;Name=MCY7218008.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001047203.1;locus_tag=MK542_07515;product=translation elongation factor 4;protein_id=MCY7218008.1;transl_table=11 JAKUZA010000044.1 Genbank gene 53403 54218 . + . ID=gene-MK542_07520;Name=MK542_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07520 JAKUZA010000044.1 Protein Homology CDS 53403 54218 . + 0 ID=cds-MCY7218009.1;Parent=gene-MK542_07520;Dbxref=NCBI_GP:MCY7218009.1;Name=MCY7218009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003072411.1;locus_tag=MK542_07520;product=Cof-type HAD-IIB family hydrolase;protein_id=MCY7218009.1;transl_table=11 JAKUZA010000044.1 Genbank gene 54824 55918 . - . ID=gene-MK542_07525;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=MK542_07525 JAKUZA010000044.1 Protein Homology CDS 54824 55918 . - 0 ID=cds-MCY7218010.1;Parent=gene-MK542_07525;Dbxref=NCBI_GP:MCY7218010.1;Name=MCY7218010.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186631.1;locus_tag=MK542_07525;product=ferrochelatase;protein_id=MCY7218010.1;transl_table=11 JAKUZA010000044.1 Genbank gene 56297 57523 . + . ID=gene-MK542_07530;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=MK542_07530 JAKUZA010000044.1 Protein Homology CDS 56297 57523 . + 0 ID=cds-MCY7218011.1;Parent=gene-MK542_07530;Dbxref=NCBI_GP:MCY7218011.1;Name=MCY7218011.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000700.1;locus_tag=MK542_07530;product=peptidase T;protein_id=MCY7218011.1;transl_table=11 JAKUZA010000044.1 Genbank gene 57711 60968 . - . ID=gene-MK542_07535;Name=MK542_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07535 JAKUZA010000044.1 Protein Homology CDS 57711 60968 . - 0 ID=cds-MCY7218012.1;Parent=gene-MK542_07535;Dbxref=NCBI_GP:MCY7218012.1;Name=MCY7218012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000701.1;locus_tag=MK542_07535;product=pneumococcal-type histidine triad protein;protein_id=MCY7218012.1;transl_table=11 JAKUZA010000044.1 Genbank gene 60978 61916 . - . ID=gene-MK542_07540;Name=MK542_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07540 JAKUZA010000044.1 Protein Homology CDS 60978 61916 . - 0 ID=cds-MCY7218013.1;Parent=gene-MK542_07540;Dbxref=NCBI_GP:MCY7218013.1;Name=MCY7218013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024239.1;locus_tag=MK542_07540;product=zinc ABC transporter substrate-binding protein;protein_id=MCY7218013.1;transl_table=11 JAKUZA010000044.1 Genbank gene 62228 62566 . - . ID=gene-MK542_07545;Name=MK542_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07545 JAKUZA010000044.1 Protein Homology CDS 62228 62566 . - 0 ID=cds-MCY7218014.1;Parent=gene-MK542_07545;Dbxref=NCBI_GP:MCY7218014.1;Name=MCY7218014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196050.1;locus_tag=MK542_07545;product=ATP cone domain-containing protein;protein_id=MCY7218014.1;transl_table=11 JAKUZA010000044.1 Genbank gene 62585 63091 . - . ID=gene-MK542_07550;Name=MK542_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07550 JAKUZA010000044.1 Protein Homology CDS 62585 63091 . - 0 ID=cds-MCY7218015.1;Parent=gene-MK542_07550;Dbxref=NCBI_GP:MCY7218015.1;Name=MCY7218015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009443890.1;locus_tag=MK542_07550;product=GNAT family N-acetyltransferase;protein_id=MCY7218015.1;transl_table=11 JAKUZA010000044.1 Genbank gene 63429 64757 . - . ID=gene-MK542_07555;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=MK542_07555 JAKUZA010000044.1 Protein Homology CDS 63429 64757 . - 0 ID=cds-MCY7218016.1;Parent=gene-MK542_07555;Dbxref=NCBI_GP:MCY7218016.1;Name=MCY7218016.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909796.1;locus_tag=MK542_07555;product=branched-chain amino acid transport system II carrier protein;protein_id=MCY7218016.1;transl_table=11 JAKUZA010000044.1 Genbank gene 65403 67175 . - . ID=gene-MK542_07560;Name=MK542_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07560 JAKUZA010000044.1 Protein Homology CDS 65403 67175 . - 0 ID=cds-MCY7218017.1;Parent=gene-MK542_07560;Dbxref=NCBI_GP:MCY7218017.1;Name=MCY7218017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003072169.1;locus_tag=MK542_07560;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7218017.1;transl_table=11 JAKUZA010000044.1 Genbank gene 67185 68921 . - . ID=gene-MK542_07565;Name=MK542_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07565 JAKUZA010000044.1 Protein Homology CDS 67185 68921 . - 0 ID=cds-MCY7218018.1;Parent=gene-MK542_07565;Dbxref=NCBI_GP:MCY7218018.1;Name=MCY7218018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000965828.1;locus_tag=MK542_07565;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7218018.1;transl_table=11 JAKUZA010000044.1 Genbank direct_repeat 69149 69545 . + . ID=id-JAKUZA010000044.1:69149..69545;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=69227..69255;rpt_unit_seq=gtctcaattccttataggtaaggtataac JAKUZA010000044.1 Genbank gene 69931 71634 . - . ID=gene-MK542_07570;Name=MK542_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07570 JAKUZA010000044.1 Protein Homology CDS 69931 71634 . - 0 ID=cds-MCY7218019.1;Parent=gene-MK542_07570;Dbxref=NCBI_GP:MCY7218019.1;Name=MCY7218019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902878.1;locus_tag=MK542_07570;product=sensor histidine kinase;protein_id=MCY7218019.1;transl_table=11 JAKUZA010000044.1 Genbank gene 71631 72365 . - . ID=gene-MK542_07575;Name=MK542_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07575 JAKUZA010000044.1 Protein Homology CDS 71631 72365 . - 0 ID=cds-MCY7218020.1;Parent=gene-MK542_07575;Dbxref=NCBI_GP:MCY7218020.1;Name=MCY7218020.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930381.1;locus_tag=MK542_07575;product=response regulator;protein_id=MCY7218020.1;transl_table=11 JAKUZA010000044.1 Genbank gene 72425 73531 . - . ID=gene-MK542_07580;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=MK542_07580 JAKUZA010000044.1 Protein Homology CDS 72425 73531 . - 0 ID=cds-MCY7218021.1;Parent=gene-MK542_07580;Dbxref=NCBI_GP:MCY7218021.1;Name=MCY7218021.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660364.1;locus_tag=MK542_07580;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=MCY7218021.1;transl_table=11 JAKUZA010000044.1 Genbank gene 73547 74110 . - . ID=gene-MK542_07585;Name=MK542_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07585 JAKUZA010000044.1 Protein Homology CDS 73547 74110 . - 0 ID=cds-MCY7218022.1;Parent=gene-MK542_07585;Dbxref=NCBI_GP:MCY7218022.1;Name=MCY7218022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933805.1;locus_tag=MK542_07585;product=redoxin domain-containing protein;protein_id=MCY7218022.1;transl_table=11 JAKUZA010000044.1 Genbank gene 74179 74499 . - . ID=gene-MK542_07590;Name=MK542_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07590 JAKUZA010000044.1 Protein Homology CDS 74179 74499 . - 0 ID=cds-MCY7218023.1;Parent=gene-MK542_07590;Dbxref=NCBI_GP:MCY7218023.1;Name=MCY7218023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919057.1;locus_tag=MK542_07590;product=hypothetical protein;protein_id=MCY7218023.1;transl_table=11 JAKUZA010000044.1 Genbank gene 74527 75237 . - . ID=gene-MK542_07595;Name=ccdA2;gbkey=Gene;gene=ccdA2;gene_biotype=protein_coding;locus_tag=MK542_07595 JAKUZA010000044.1 Protein Homology CDS 74527 75237 . - 0 ID=cds-MCY7218024.1;Parent=gene-MK542_07595;Dbxref=NCBI_GP:MCY7218024.1;Name=MCY7218024.1;gbkey=CDS;gene=ccdA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895561.1;locus_tag=MK542_07595;product=thiol-disulfide oxidoreductase-associated membrane protein CcdA2;protein_id=MCY7218024.1;transl_table=11 JAKUZA010000044.1 Genbank pseudogene 75380 76413 . - . ID=gene-MK542_07600;Name=MK542_07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07600;pseudo=true JAKUZA010000044.1 Protein Homology CDS 75380 76413 . - 0 ID=cds-MK542_07600;Parent=gene-MK542_07600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604713.1;locus_tag=MK542_07600;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11 JAKUZA010000044.1 Genbank gene 76410 77108 . - . ID=gene-MK542_07605;Name=MK542_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07605 JAKUZA010000044.1 Protein Homology CDS 76410 77108 . - 0 ID=cds-MCY7218025.1;Parent=gene-MK542_07605;Dbxref=NCBI_GP:MCY7218025.1;Name=MCY7218025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522722.1;locus_tag=MK542_07605;product=response regulator transcription factor;protein_id=MCY7218025.1;transl_table=11 JAKUZA010000044.1 Genbank gene 77189 78454 . - . ID=gene-MK542_07610;Name=MK542_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07610 JAKUZA010000044.1 Protein Homology CDS 77189 78454 . - 0 ID=cds-MCY7218026.1;Parent=gene-MK542_07610;Dbxref=NCBI_GP:MCY7218026.1;Name=MCY7218026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671343.1;locus_tag=MK542_07610;product=fibronectin-binding SSURE repeat-containing protein;protein_id=MCY7218026.1;transl_table=11 ##sequence-region JAKUZA010000045.1 1 33031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000045.1 Genbank region 1 33031 . + . ID=JAKUZA010000045.1:1..33031;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000045.1 Genbank gene 45 2696 . - . ID=gene-MK542_07615;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=MK542_07615 JAKUZA010000045.1 Protein Homology CDS 45 2696 . - 0 ID=cds-MCY7218027.1;Parent=gene-MK542_07615;Dbxref=NCBI_GP:MCY7218027.1;Name=MCY7218027.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764000.1;locus_tag=MK542_07615;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=MCY7218027.1;transl_table=11 JAKUZA010000045.1 Genbank gene 2988 4802 . - . ID=gene-MK542_07620;Name=MK542_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07620 JAKUZA010000045.1 Protein Homology CDS 2988 4802 . - 0 ID=cds-MCY7218028.1;Parent=gene-MK542_07620;Dbxref=NCBI_GP:MCY7218028.1;Name=MCY7218028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591331.1;locus_tag=MK542_07620;product=acyltransferase;protein_id=MCY7218028.1;transl_table=11 JAKUZA010000045.1 Genbank gene 4792 5205 . - . ID=gene-MK542_07625;Name=MK542_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07625 JAKUZA010000045.1 Protein Homology CDS 4792 5205 . - 0 ID=cds-MCY7218029.1;Parent=gene-MK542_07625;Dbxref=NCBI_GP:MCY7218029.1;Name=MCY7218029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027219.1;locus_tag=MK542_07625;product=hypothetical protein;protein_id=MCY7218029.1;transl_table=11 JAKUZA010000045.1 Genbank gene 5209 5631 . - . ID=gene-MK542_07630;Name=MK542_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07630 JAKUZA010000045.1 Protein Homology CDS 5209 5631 . - 0 ID=cds-MCY7218030.1;Parent=gene-MK542_07630;Dbxref=NCBI_GP:MCY7218030.1;Name=MCY7218030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185073.1;locus_tag=MK542_07630;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=MCY7218030.1;transl_table=11 JAKUZA010000045.1 Genbank gene 5760 6347 . - . ID=gene-MK542_07635;Name=MK542_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07635 JAKUZA010000045.1 Protein Homology CDS 5760 6347 . - 0 ID=cds-MCY7218031.1;Parent=gene-MK542_07635;Dbxref=NCBI_GP:MCY7218031.1;Name=MCY7218031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591334.1;locus_tag=MK542_07635;product=nucleotidyltransferase family protein;protein_id=MCY7218031.1;transl_table=11 JAKUZA010000045.1 Genbank gene 6372 6671 . - . ID=gene-MK542_07640;Name=MK542_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07640 JAKUZA010000045.1 Protein Homology CDS 6372 6671 . - 0 ID=cds-MCY7218032.1;Parent=gene-MK542_07640;Dbxref=NCBI_GP:MCY7218032.1;Name=MCY7218032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148765.1;locus_tag=MK542_07640;product=hypothetical protein;protein_id=MCY7218032.1;transl_table=11 JAKUZA010000045.1 Genbank gene 6652 7044 . - . ID=gene-MK542_07645;Name=MK542_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07645 JAKUZA010000045.1 GeneMarkS-2+ CDS 6652 7044 . - 0 ID=cds-MCY7218033.1;Parent=gene-MK542_07645;Dbxref=NCBI_GP:MCY7218033.1;Name=MCY7218033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07645;product=hypothetical protein;protein_id=MCY7218033.1;transl_table=11 JAKUZA010000045.1 Genbank gene 7026 7757 . - . ID=gene-MK542_07650;Name=MK542_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07650 JAKUZA010000045.1 GeneMarkS-2+ CDS 7026 7757 . - 0 ID=cds-MCY7218034.1;Parent=gene-MK542_07650;Dbxref=NCBI_GP:MCY7218034.1;Name=MCY7218034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07650;product=hypothetical protein;protein_id=MCY7218034.1;transl_table=11 JAKUZA010000045.1 Genbank gene 7773 8288 . - . ID=gene-MK542_07655;Name=MK542_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07655 JAKUZA010000045.1 Protein Homology CDS 7773 8288 . - 0 ID=cds-MCY7218035.1;Parent=gene-MK542_07655;Dbxref=NCBI_GP:MCY7218035.1;Name=MCY7218035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568112.1;locus_tag=MK542_07655;product=hypothetical protein;protein_id=MCY7218035.1;transl_table=11 JAKUZA010000045.1 Genbank gene 8288 8716 . - . ID=gene-MK542_07660;Name=MK542_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07660 JAKUZA010000045.1 Protein Homology CDS 8288 8716 . - 0 ID=cds-MCY7218036.1;Parent=gene-MK542_07660;Dbxref=NCBI_GP:MCY7218036.1;Name=MCY7218036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065610.1;locus_tag=MK542_07660;product=hypothetical protein;protein_id=MCY7218036.1;transl_table=11 JAKUZA010000045.1 Genbank gene 8756 9094 . - . ID=gene-MK542_07665;Name=MK542_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07665 JAKUZA010000045.1 Protein Homology CDS 8756 9094 . - 0 ID=cds-MCY7218037.1;Parent=gene-MK542_07665;Dbxref=NCBI_GP:MCY7218037.1;Name=MCY7218037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073711.1;locus_tag=MK542_07665;product=hypothetical protein;protein_id=MCY7218037.1;transl_table=11 JAKUZA010000045.1 Genbank gene 9094 9516 . - . ID=gene-MK542_07670;Name=MK542_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07670 JAKUZA010000045.1 Protein Homology CDS 9094 9516 . - 0 ID=cds-MCY7218038.1;Parent=gene-MK542_07670;Dbxref=NCBI_GP:MCY7218038.1;Name=MCY7218038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002880689.1;locus_tag=MK542_07670;product=hypothetical protein;protein_id=MCY7218038.1;transl_table=11 JAKUZA010000045.1 Genbank gene 9648 10646 . - . ID=gene-MK542_07675;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=MK542_07675 JAKUZA010000045.1 Protein Homology CDS 9648 10646 . - 0 ID=cds-MCY7218039.1;Parent=gene-MK542_07675;Dbxref=NCBI_GP:MCY7218039.1;Name=MCY7218039.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808138.1;locus_tag=MK542_07675;product=Holliday junction branch migration DNA helicase RuvB;protein_id=MCY7218039.1;transl_table=11 JAKUZA010000045.1 Genbank gene 10962 11999 . - . ID=gene-MK542_07680;Name=MK542_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07680 JAKUZA010000045.1 Protein Homology CDS 10962 11999 . - 0 ID=cds-MCY7218040.1;Parent=gene-MK542_07680;Dbxref=NCBI_GP:MCY7218040.1;Name=MCY7218040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003071213.1;locus_tag=MK542_07680;product=galactose mutarotase;protein_id=MCY7218040.1;transl_table=11 JAKUZA010000045.1 Genbank gene 12021 13052 . - . ID=gene-MK542_07685;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=MK542_07685 JAKUZA010000045.1 Protein Homology CDS 12021 13052 . - 0 ID=cds-MCY7218041.1;Parent=gene-MK542_07685;Dbxref=NCBI_GP:MCY7218041.1;Name=MCY7218041.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040892.1;locus_tag=MK542_07685;product=tagatose-bisphosphate aldolase;protein_id=MCY7218041.1;transl_table=11 JAKUZA010000045.1 Genbank gene 13074 14237 . - . ID=gene-MK542_07690;Name=MK542_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07690 JAKUZA010000045.1 Protein Homology CDS 13074 14237 . - 0 ID=cds-MCY7218042.1;Parent=gene-MK542_07690;Dbxref=NCBI_GP:MCY7218042.1;Name=MCY7218042.1;Ontology_term=GO:1901135;gbkey=CDS;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591338.1;locus_tag=MK542_07690;product=SIS domain-containing protein;protein_id=MCY7218042.1;transl_table=11 JAKUZA010000045.1 Genbank gene 14346 14750 . - . ID=gene-MK542_07695;Name=MK542_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07695 JAKUZA010000045.1 Protein Homology CDS 14346 14750 . - 0 ID=cds-MCY7218043.1;Parent=gene-MK542_07695;Dbxref=NCBI_GP:MCY7218043.1;Name=MCY7218043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894390.1;locus_tag=MK542_07695;product=PTS sugar transporter subunit IIA;protein_id=MCY7218043.1;transl_table=11 JAKUZA010000045.1 Genbank gene 14762 15580 . - . ID=gene-MK542_07700;Name=MK542_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07700 JAKUZA010000045.1 Protein Homology CDS 14762 15580 . - 0 ID=cds-MCY7218044.1;Parent=gene-MK542_07700;Dbxref=NCBI_GP:MCY7218044.1;Name=MCY7218044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754896.1;locus_tag=MK542_07700;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MCY7218044.1;transl_table=11 JAKUZA010000045.1 Genbank gene 15567 16481 . - . ID=gene-MK542_07705;Name=MK542_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07705 JAKUZA010000045.1 Protein Homology CDS 15567 16481 . - 0 ID=cds-MCY7218045.1;Parent=gene-MK542_07705;Dbxref=NCBI_GP:MCY7218045.1;Name=MCY7218045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149155.1;locus_tag=MK542_07705;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=MCY7218045.1;transl_table=11 JAKUZA010000045.1 Genbank gene 16508 16984 . - . ID=gene-MK542_07710;Name=MK542_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07710 JAKUZA010000045.1 Protein Homology CDS 16508 16984 . - 0 ID=cds-MCY7218046.1;Parent=gene-MK542_07710;Dbxref=NCBI_GP:MCY7218046.1;Name=MCY7218046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032077.1;locus_tag=MK542_07710;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=MCY7218046.1;transl_table=11 JAKUZA010000045.1 Genbank gene 16981 18768 . - . ID=gene-MK542_07715;Name=MK542_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07715 JAKUZA010000045.1 Protein Homology CDS 16981 18768 . - 0 ID=cds-MCY7218047.1;Parent=gene-MK542_07715;Dbxref=NCBI_GP:MCY7218047.1;Name=MCY7218047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262529.1;locus_tag=MK542_07715;product=beta-galactosidase;protein_id=MCY7218047.1;transl_table=11 JAKUZA010000045.1 Genbank gene 18909 19625 . + . ID=gene-MK542_07720;Name=MK542_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07720 JAKUZA010000045.1 Protein Homology CDS 18909 19625 . + 0 ID=cds-MCY7218048.1;Parent=gene-MK542_07720;Dbxref=NCBI_GP:MCY7218048.1;Name=MCY7218048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931774.1;locus_tag=MK542_07720;product=GntR family transcriptional regulator;protein_id=MCY7218048.1;transl_table=11 JAKUZA010000045.1 Genbank gene 20108 20482 . - . ID=gene-MK542_07725;Name=MK542_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07725 JAKUZA010000045.1 Protein Homology CDS 20108 20482 . - 0 ID=cds-MCY7218049.1;Parent=gene-MK542_07725;Dbxref=NCBI_GP:MCY7218049.1;Name=MCY7218049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960428.1;locus_tag=MK542_07725;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=MCY7218049.1;transl_table=11 JAKUZA010000045.1 Genbank gene 20482 21060 . - . ID=gene-MK542_07730;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=MK542_07730 JAKUZA010000045.1 Protein Homology CDS 20482 21060 . - 0 ID=cds-MCY7218050.1;Parent=gene-MK542_07730;Dbxref=NCBI_GP:MCY7218050.1;Name=MCY7218050.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908417.1;locus_tag=MK542_07730;product=dihydroxyacetone kinase subunit L;protein_id=MCY7218050.1;transl_table=11 JAKUZA010000045.1 Genbank gene 21071 22060 . - . ID=gene-MK542_07735;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=MK542_07735 JAKUZA010000045.1 Protein Homology CDS 21071 22060 . - 0 ID=cds-MCY7218051.1;Parent=gene-MK542_07735;Dbxref=NCBI_GP:MCY7218051.1;Name=MCY7218051.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722658.1;locus_tag=MK542_07735;product=dihydroxyacetone kinase subunit DhaK;protein_id=MCY7218051.1;transl_table=11 JAKUZA010000045.1 Genbank gene 22278 22874 . + . ID=gene-MK542_07740;Name=MK542_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07740 JAKUZA010000045.1 Protein Homology CDS 22278 22874 . + 0 ID=cds-MCY7218052.1;Parent=gene-MK542_07740;Dbxref=NCBI_GP:MCY7218052.1;Name=MCY7218052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002279036.1;locus_tag=MK542_07740;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7218052.1;transl_table=11 JAKUZA010000045.1 Genbank gene 22871 23437 . + . ID=gene-MK542_07745;Name=MK542_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07745 JAKUZA010000045.1 Protein Homology CDS 22871 23437 . + 0 ID=cds-MCY7218053.1;Parent=gene-MK542_07745;Dbxref=NCBI_GP:MCY7218053.1;Name=MCY7218053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263120.1;locus_tag=MK542_07745;product=NAD(P)H-dependent oxidoreductase;protein_id=MCY7218053.1;transl_table=11 JAKUZA010000045.1 Genbank gene 23620 24915 . - . ID=gene-MK542_07750;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=MK542_07750 JAKUZA010000045.1 Protein Homology CDS 23620 24915 . - 0 ID=cds-MCY7218054.1;Parent=gene-MK542_07750;Dbxref=NCBI_GP:MCY7218054.1;Name=MCY7218054.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591345.1;locus_tag=MK542_07750;product=adenylosuccinate lyase;protein_id=MCY7218054.1;transl_table=11 JAKUZA010000045.1 Genbank gene 24960 25874 . - . ID=gene-MK542_07755;Name=MK542_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07755 JAKUZA010000045.1 Protein Homology CDS 24960 25874 . - 0 ID=cds-MCY7218055.1;Parent=gene-MK542_07755;Dbxref=NCBI_GP:MCY7218055.1;Name=MCY7218055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308398.1;locus_tag=MK542_07755;product=DUF4435 domain-containing protein;protein_id=MCY7218055.1;transl_table=11 JAKUZA010000045.1 Genbank gene 25867 27300 . - . ID=gene-MK542_07760;Name=MK542_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07760 JAKUZA010000045.1 Protein Homology CDS 25867 27300 . - 0 ID=cds-MCY7218056.1;Parent=gene-MK542_07760;Dbxref=NCBI_GP:MCY7218056.1;Name=MCY7218056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308400.1;locus_tag=MK542_07760;product=ATP-binding protein;protein_id=MCY7218056.1;transl_table=11 JAKUZA010000045.1 Genbank gene 27293 27520 . - . ID=gene-MK542_07765;Name=MK542_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07765 JAKUZA010000045.1 Protein Homology CDS 27293 27520 . - 0 ID=cds-MCY7218057.1;Parent=gene-MK542_07765;Dbxref=NCBI_GP:MCY7218057.1;Name=MCY7218057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270103.1;locus_tag=MK542_07765;product=phosphoribosylaminoimidazole carboxylase;protein_id=MCY7218057.1;transl_table=11 JAKUZA010000045.1 Genbank gene 27530 28621 . - . ID=gene-MK542_07770;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=MK542_07770 JAKUZA010000045.1 Protein Homology CDS 27530 28621 . - 0 ID=cds-MCY7218058.1;Parent=gene-MK542_07770;Dbxref=NCBI_GP:MCY7218058.1;Name=MCY7218058.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099033.1;locus_tag=MK542_07770;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=MCY7218058.1;transl_table=11 JAKUZA010000045.1 Genbank gene 28608 29099 . - . ID=gene-MK542_07775;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=MK542_07775 JAKUZA010000045.1 Protein Homology CDS 28608 29099 . - 0 ID=cds-MCY7218059.1;Parent=gene-MK542_07775;Dbxref=NCBI_GP:MCY7218059.1;Name=MCY7218059.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591351.1;locus_tag=MK542_07775;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MCY7218059.1;transl_table=11 JAKUZA010000045.1 Genbank gene 29298 30563 . - . ID=gene-MK542_07780;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=MK542_07780 JAKUZA010000045.1 Protein Homology CDS 29298 30563 . - 0 ID=cds-MCY7218060.1;Parent=gene-MK542_07780;Dbxref=NCBI_GP:MCY7218060.1;Name=MCY7218060.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466421.1;locus_tag=MK542_07780;product=phosphoribosylamine--glycine ligase;protein_id=MCY7218060.1;transl_table=11 JAKUZA010000045.1 Genbank gene 30884 32833 . + . ID=gene-MK542_07785;Name=MK542_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07785 JAKUZA010000045.1 Protein Homology CDS 30884 32833 . + 0 ID=cds-MCY7218061.1;Parent=gene-MK542_07785;Dbxref=NCBI_GP:MCY7218061.1;Name=MCY7218061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836292.1;locus_tag=MK542_07785;product=GBS Bsp-like repeat-containing protein;protein_id=MCY7218061.1;transl_table=11 ##sequence-region JAKUZA010000046.1 1 4795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000046.1 Genbank region 1 4795 . + . ID=JAKUZA010000046.1:1..4795;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000046.1 Genbank gene 123 2699 . - . ID=gene-MK542_07790;Name=MK542_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07790 JAKUZA010000046.1 Protein Homology CDS 123 2699 . - 0 ID=cds-MCY7218062.1;Parent=gene-MK542_07790;Dbxref=NCBI_GP:MCY7218062.1;Name=MCY7218062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003071649.1;locus_tag=MK542_07790;product=YfhO family protein;protein_id=MCY7218062.1;transl_table=11 JAKUZA010000046.1 Genbank gene 2775 4397 . - . ID=gene-MK542_07795;Name=MK542_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07795 JAKUZA010000046.1 Protein Homology CDS 2775 4397 . - 0 ID=cds-MCY7218063.1;Parent=gene-MK542_07795;Dbxref=NCBI_GP:MCY7218063.1;Name=MCY7218063.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511338.1;locus_tag=MK542_07795;product=ATP-binding cassette domain-containing protein;protein_id=MCY7218063.1;transl_table=11 JAKUZA010000046.1 Genbank gene 4638 4795 . - . ID=gene-MK542_07800;Name=MK542_07800;end_range=4795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07800;partial=true JAKUZA010000046.1 Protein Homology CDS 4638 4795 . - 2 ID=cds-MCY7218064.1;Parent=gene-MK542_07800;Dbxref=NCBI_GP:MCY7218064.1;Name=MCY7218064.1;end_range=4795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_07800;partial=true;product=IS481 family transposase;protein_id=MCY7218064.1;transl_table=11 ##sequence-region JAKUZA010000047.1 1 11594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000047.1 Genbank region 1 11594 . + . ID=JAKUZA010000047.1:1..11594;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000047.1 Genbank gene 198 944 . + . ID=gene-MK542_07805;Name=MK542_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07805 JAKUZA010000047.1 Protein Homology CDS 198 944 . + 0 ID=cds-MCY7218065.1;Parent=gene-MK542_07805;Dbxref=NCBI_GP:MCY7218065.1;Name=MCY7218065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929756.1;locus_tag=MK542_07805;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=MCY7218065.1;transl_table=11 JAKUZA010000047.1 Genbank gene 934 1200 . + . ID=gene-MK542_07810;Name=MK542_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07810 JAKUZA010000047.1 Protein Homology CDS 934 1200 . + 0 ID=cds-MCY7218066.1;Parent=gene-MK542_07810;Dbxref=NCBI_GP:MCY7218066.1;Name=MCY7218066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713067.1;locus_tag=MK542_07810;product=GIY-YIG nuclease family protein;protein_id=MCY7218066.1;transl_table=11 JAKUZA010000047.1 Genbank gene 1573 2319 . + . ID=gene-MK542_07815;Name=MK542_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07815 JAKUZA010000047.1 Protein Homology CDS 1573 2319 . + 0 ID=cds-MCY7218067.1;Parent=gene-MK542_07815;Dbxref=NCBI_GP:MCY7218067.1;Name=MCY7218067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932812.1;locus_tag=MK542_07815;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MCY7218067.1;transl_table=11 JAKUZA010000047.1 Genbank gene 2659 2934 . - . ID=gene-MK542_07820;Name=MK542_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07820 JAKUZA010000047.1 Protein Homology CDS 2659 2934 . - 0 ID=cds-MCY7218068.1;Parent=gene-MK542_07820;Dbxref=NCBI_GP:MCY7218068.1;Name=MCY7218068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950996.1;locus_tag=MK542_07820;product=HU family DNA-binding protein;protein_id=MCY7218068.1;transl_table=11 JAKUZA010000047.1 Genbank gene 3047 3880 . - . ID=gene-MK542_07825;Name=MK542_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07825 JAKUZA010000047.1 Protein Homology CDS 3047 3880 . - 0 ID=cds-MCY7218069.1;Parent=gene-MK542_07825;Dbxref=NCBI_GP:MCY7218069.1;Name=MCY7218069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925543.1;locus_tag=MK542_07825;product=DegV family protein;protein_id=MCY7218069.1;transl_table=11 JAKUZA010000047.1 Genbank gene 4253 5221 . + . ID=gene-MK542_07830;Name=MK542_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07830 JAKUZA010000047.1 Protein Homology CDS 4253 5221 . + 0 ID=cds-MCY7218070.1;Parent=gene-MK542_07830;Dbxref=NCBI_GP:MCY7218070.1;Name=MCY7218070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900700.1;locus_tag=MK542_07830;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCY7218070.1;transl_table=11 JAKUZA010000047.1 Genbank gene 5254 6165 . - . ID=gene-MK542_07835;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=MK542_07835 JAKUZA010000047.1 Protein Homology CDS 5254 6165 . - 0 ID=cds-MCY7218071.1;Parent=gene-MK542_07835;Dbxref=NCBI_GP:MCY7218071.1;Name=MCY7218071.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590210.1;locus_tag=MK542_07835;product=DNA-binding protein WhiA;protein_id=MCY7218071.1;transl_table=11 JAKUZA010000047.1 Genbank gene 6162 7139 . - . ID=gene-MK542_07840;Name=MK542_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07840 JAKUZA010000047.1 Protein Homology CDS 6162 7139 . - 0 ID=cds-MCY7218072.1;Parent=gene-MK542_07840;Dbxref=NCBI_GP:MCY7218072.1;Name=MCY7218072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604824.1;locus_tag=MK542_07840;product=YvcK family protein;protein_id=MCY7218072.1;transl_table=11 JAKUZA010000047.1 Genbank gene 7136 8026 . - . ID=gene-MK542_07845;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=MK542_07845 JAKUZA010000047.1 Protein Homology CDS 7136 8026 . - 0 ID=cds-MCY7218073.1;Parent=gene-MK542_07845;Dbxref=NCBI_GP:MCY7218073.1;Name=MCY7218073.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163059.1;locus_tag=MK542_07845;product=RNase adapter RapZ;protein_id=MCY7218073.1;transl_table=11 JAKUZA010000047.1 Genbank gene 8093 8476 . - . ID=gene-MK542_07850;Name=MK542_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07850 JAKUZA010000047.1 Protein Homology CDS 8093 8476 . - 0 ID=cds-MCY7218074.1;Parent=gene-MK542_07850;Dbxref=NCBI_GP:MCY7218074.1;Name=MCY7218074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590207.1;locus_tag=MK542_07850;product=RidA family protein;protein_id=MCY7218074.1;transl_table=11 JAKUZA010000047.1 cmsearch riboswitch 8606 8650 . + . ID=id-JAKUZA010000047.1:8606..8650;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000047.1 Genbank gene 8772 9749 . + . ID=gene-MK542_07855;Name=MK542_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07855 JAKUZA010000047.1 Protein Homology CDS 8772 9749 . + 0 ID=cds-MCY7218075.1;Parent=gene-MK542_07855;Dbxref=NCBI_GP:MCY7218075.1;Name=MCY7218075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604821.1;locus_tag=MK542_07855;product=nucleoside hydrolase;protein_id=MCY7218075.1;transl_table=11 JAKUZA010000047.1 Genbank gene 9754 10320 . + . ID=gene-MK542_07860;Name=MK542_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07860 JAKUZA010000047.1 Protein Homology CDS 9754 10320 . + 0 ID=cds-MCY7218076.1;Parent=gene-MK542_07860;Dbxref=NCBI_GP:MCY7218076.1;Name=MCY7218076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604820.1;locus_tag=MK542_07860;product=ECF transporter S component;protein_id=MCY7218076.1;transl_table=11 JAKUZA010000047.1 Genbank gene 10563 11594 . - . ID=gene-MK542_07865;Name=MK542_07865;end_range=11594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07865;partial=true JAKUZA010000047.1 Protein Homology CDS 10563 11594 . - 0 ID=cds-MCY7218077.1;Parent=gene-MK542_07865;Dbxref=NCBI_GP:MCY7218077.1;Name=MCY7218077.1;end_range=11594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592201.1;locus_tag=MK542_07865;partial=true;product=GBS Bsp-like repeat-containing protein;protein_id=MCY7218077.1;transl_table=11 ##sequence-region JAKUZA010000048.1 1 9331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000048.1 Genbank region 1 9331 . + . ID=JAKUZA010000048.1:1..9331;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000048.1 Genbank gene 82 297 . + . ID=gene-MK542_07870;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=MK542_07870 JAKUZA010000048.1 Protein Homology CDS 82 297 . + 0 ID=cds-MCY7218078.1;Parent=gene-MK542_07870;Dbxref=NCBI_GP:MCY7218078.1;Name=MCY7218078.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713110.1;locus_tag=MK542_07870;product=30S ribosomal protein S21;protein_id=MCY7218078.1;transl_table=11 JAKUZA010000048.1 Genbank gene 398 784 . - . ID=gene-MK542_07875;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=MK542_07875 JAKUZA010000048.1 Protein Homology CDS 398 784 . - 0 ID=cds-MCY7218079.1;Parent=gene-MK542_07875;Dbxref=NCBI_GP:MCY7218079.1;Name=MCY7218079.1;Ontology_term=GO:0006810,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604866.1;locus_tag=MK542_07875;product=large conductance mechanosensitive channel protein MscL;protein_id=MCY7218079.1;transl_table=11 JAKUZA010000048.1 Genbank gene 919 2724 . + . ID=gene-MK542_07880;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=MK542_07880 JAKUZA010000048.1 Protein Homology CDS 919 2724 . + 0 ID=cds-MCY7218080.1;Parent=gene-MK542_07880;Dbxref=NCBI_GP:MCY7218080.1;Name=MCY7218080.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915548.1;locus_tag=MK542_07880;product=DNA primase;protein_id=MCY7218080.1;transl_table=11 JAKUZA010000048.1 Genbank gene 2727 3839 . + . ID=gene-MK542_07885;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=MK542_07885 JAKUZA010000048.1 Protein Homology CDS 2727 3839 . + 0 ID=cds-MCY7218081.1;Parent=gene-MK542_07885;Dbxref=NCBI_GP:MCY7218081.1;Name=MCY7218081.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201905.1;locus_tag=MK542_07885;product=RNA polymerase sigma factor RpoD;protein_id=MCY7218081.1;transl_table=11 JAKUZA010000048.1 Genbank gene 3967 4305 . + . ID=gene-MK542_07890;Name=MK542_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07890 JAKUZA010000048.1 Protein Homology CDS 3967 4305 . + 0 ID=cds-MCY7218082.1;Parent=gene-MK542_07890;Dbxref=NCBI_GP:MCY7218082.1;Name=MCY7218082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836737.1;locus_tag=MK542_07890;product=metal-sulfur cluster assembly factor;protein_id=MCY7218082.1;transl_table=11 JAKUZA010000048.1 Genbank gene 4606 5655 . + . ID=gene-MK542_07895;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=MK542_07895 JAKUZA010000048.1 Protein Homology CDS 4606 5655 . + 0 ID=cds-MCY7218083.1;Parent=gene-MK542_07895;Dbxref=NCBI_GP:MCY7218083.1;Name=MCY7218083.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009443186.1;locus_tag=MK542_07895;product=phenylalanine--tRNA ligase subunit alpha;protein_id=MCY7218083.1;transl_table=11 JAKUZA010000048.1 Genbank gene 5701 6210 . + . ID=gene-MK542_07900;Name=MK542_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07900 JAKUZA010000048.1 Protein Homology CDS 5701 6210 . + 0 ID=cds-MCY7218084.1;Parent=gene-MK542_07900;Dbxref=NCBI_GP:MCY7218084.1;Name=MCY7218084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895810.1;locus_tag=MK542_07900;product=GNAT family N-acetyltransferase;protein_id=MCY7218084.1;transl_table=11 JAKUZA010000048.1 Genbank gene 6627 9032 . + . ID=gene-MK542_07905;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=MK542_07905 JAKUZA010000048.1 Protein Homology CDS 6627 9032 . + 0 ID=cds-MCY7218085.1;Parent=gene-MK542_07905;Dbxref=NCBI_GP:MCY7218085.1;Name=MCY7218085.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897790.1;locus_tag=MK542_07905;product=phenylalanine--tRNA ligase subunit beta;protein_id=MCY7218085.1;transl_table=11 JAKUZA010000048.1 Genbank gene 9199 9331 . - . ID=gene-MK542_07910;Name=MK542_07910;end_range=9331,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07910;partial=true JAKUZA010000048.1 Protein Homology CDS 9199 9331 . - 1 ID=cds-MCY7218086.1;Parent=gene-MK542_07910;Dbxref=NCBI_GP:MCY7218086.1;Name=MCY7218086.1;end_range=9331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_07910;partial=true;product=transposase;protein_id=MCY7218086.1;transl_table=11 ##sequence-region JAKUZA010000049.1 1 26427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000049.1 Genbank region 1 26427 . + . ID=JAKUZA010000049.1:1..26427;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000049.1 Genbank gene 235 933 . + . ID=gene-MK542_07915;Name=MK542_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07915 JAKUZA010000049.1 Protein Homology CDS 235 933 . + 0 ID=cds-MCY7218087.1;Parent=gene-MK542_07915;Dbxref=NCBI_GP:MCY7218087.1;Name=MCY7218087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398897.1;locus_tag=MK542_07915;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MCY7218087.1;transl_table=11 JAKUZA010000049.1 Genbank gene 948 2084 . + . ID=gene-MK542_07920;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=MK542_07920 JAKUZA010000049.1 Protein Homology CDS 948 2084 . + 0 ID=cds-MCY7218088.1;Parent=gene-MK542_07920;Dbxref=NCBI_GP:MCY7218088.1;Name=MCY7218088.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905742.1;locus_tag=MK542_07920;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MCY7218088.1;transl_table=11 JAKUZA010000049.1 Genbank gene 2306 3625 . + . ID=gene-MK542_07925;Name=MK542_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07925 JAKUZA010000049.1 Protein Homology CDS 2306 3625 . + 0 ID=cds-MCY7218089.1;Parent=gene-MK542_07925;Dbxref=NCBI_GP:MCY7218089.1;Name=MCY7218089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905743.1;locus_tag=MK542_07925;product=ABC transporter substrate-binding protein;protein_id=MCY7218089.1;transl_table=11 JAKUZA010000049.1 Genbank gene 3721 4608 . + . ID=gene-MK542_07930;Name=MK542_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07930 JAKUZA010000049.1 Protein Homology CDS 3721 4608 . + 0 ID=cds-MCY7218090.1;Parent=gene-MK542_07930;Dbxref=NCBI_GP:MCY7218090.1;Name=MCY7218090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041053.1;locus_tag=MK542_07930;product=sugar ABC transporter permease;protein_id=MCY7218090.1;transl_table=11 JAKUZA010000049.1 Genbank gene 4625 5455 . + . ID=gene-MK542_07935;Name=MK542_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07935 JAKUZA010000049.1 Protein Homology CDS 4625 5455 . + 0 ID=cds-MCY7218091.1;Parent=gene-MK542_07935;Dbxref=NCBI_GP:MCY7218091.1;Name=MCY7218091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036967.1;locus_tag=MK542_07935;product=carbohydrate ABC transporter permease;protein_id=MCY7218091.1;transl_table=11 JAKUZA010000049.1 Genbank gene 5481 5933 . + . ID=gene-MK542_07940;Name=MK542_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07940 JAKUZA010000049.1 Protein Homology CDS 5481 5933 . + 0 ID=cds-MCY7218092.1;Parent=gene-MK542_07940;Dbxref=NCBI_GP:MCY7218092.1;Name=MCY7218092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000575445.1;locus_tag=MK542_07940;product=YhcH/YjgK/YiaL family protein;protein_id=MCY7218092.1;transl_table=11 JAKUZA010000049.1 Genbank gene 5989 6639 . + . ID=gene-MK542_07945;Name=MK542_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07945 JAKUZA010000049.1 Protein Homology CDS 5989 6639 . + 0 ID=cds-MCY7218093.1;Parent=gene-MK542_07945;Dbxref=NCBI_GP:MCY7218093.1;Name=MCY7218093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604216.1;locus_tag=MK542_07945;product=DUF624 domain-containing protein;protein_id=MCY7218093.1;transl_table=11 JAKUZA010000049.1 Genbank gene 6673 7590 . + . ID=gene-MK542_07950;Name=MK542_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07950 JAKUZA010000049.1 Protein Homology CDS 6673 7590 . + 0 ID=cds-MCY7218094.1;Parent=gene-MK542_07950;Dbxref=NCBI_GP:MCY7218094.1;Name=MCY7218094.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894436.1;locus_tag=MK542_07950;product=dihydrodipicolinate synthase family protein;protein_id=MCY7218094.1;transl_table=11 JAKUZA010000049.1 Genbank gene 7609 8493 . + . ID=gene-MK542_07955;Name=MK542_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07955 JAKUZA010000049.1 Protein Homology CDS 7609 8493 . + 0 ID=cds-MCY7218095.1;Parent=gene-MK542_07955;Dbxref=NCBI_GP:MCY7218095.1;Name=MCY7218095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270385.1;locus_tag=MK542_07955;product=ROK family protein;protein_id=MCY7218095.1;transl_table=11 JAKUZA010000049.1 Genbank gene 8723 9568 . - . ID=gene-MK542_07960;Name=MK542_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07960 JAKUZA010000049.1 Protein Homology CDS 8723 9568 . - 0 ID=cds-MCY7218096.1;Parent=gene-MK542_07960;Dbxref=NCBI_GP:MCY7218096.1;Name=MCY7218096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543691.1;locus_tag=MK542_07960;product=MurR/RpiR family transcriptional regulator;protein_id=MCY7218096.1;transl_table=11 JAKUZA010000049.1 Genbank gene 9961 10656 . + . ID=gene-MK542_07965;Name=MK542_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07965 JAKUZA010000049.1 Protein Homology CDS 9961 10656 . + 0 ID=cds-MCY7218097.1;Parent=gene-MK542_07965;Dbxref=NCBI_GP:MCY7218097.1;Name=MCY7218097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660200.1;locus_tag=MK542_07965;product=GNAT family N-acetyltransferase;protein_id=MCY7218097.1;transl_table=11 JAKUZA010000049.1 Genbank pseudogene 11050 11145 . + . ID=gene-MK542_07970;Name=MK542_07970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07970;pseudo=true JAKUZA010000049.1 Protein Homology CDS 11050 11145 . + 0 ID=cds-MK542_07970;Parent=gene-MK542_07970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916750.1;locus_tag=MK542_07970;product=V-type ATP synthase subunit D;pseudo=true;transl_table=11 JAKUZA010000049.1 Genbank gene 11369 12853 . + . ID=gene-MK542_07975;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=MK542_07975 JAKUZA010000049.1 Protein Homology CDS 11369 12853 . + 0 ID=cds-MCY7218098.1;Parent=gene-MK542_07975;Dbxref=NCBI_GP:MCY7218098.1;Name=MCY7218098.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595200.1;locus_tag=MK542_07975;product=threonine synthase;protein_id=MCY7218098.1;transl_table=11 JAKUZA010000049.1 Genbank gene 12962 14239 . + . ID=gene-MK542_07980;Name=MK542_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07980 JAKUZA010000049.1 Protein Homology CDS 12962 14239 . + 0 ID=cds-MCY7218099.1;Parent=gene-MK542_07980;Dbxref=NCBI_GP:MCY7218099.1;Name=MCY7218099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928759.1;locus_tag=MK542_07980;product=MATE family efflux transporter;protein_id=MCY7218099.1;transl_table=11 JAKUZA010000049.1 Genbank gene 14236 14850 . + . ID=gene-MK542_07985;Name=MK542_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07985 JAKUZA010000049.1 Protein Homology CDS 14236 14850 . + 0 ID=cds-MCY7218100.1;Parent=gene-MK542_07985;Dbxref=NCBI_GP:MCY7218100.1;Name=MCY7218100.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899654.1;locus_tag=MK542_07985;product=HAD-IA family hydrolase;protein_id=MCY7218100.1;transl_table=11 JAKUZA010000049.1 Genbank pseudogene 14898 15381 . - . ID=gene-MK542_07990;Name=MK542_07990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_07990;pseudo=true JAKUZA010000049.1 Protein Homology CDS 14898 15381 . - 0 ID=cds-MK542_07990;Parent=gene-MK542_07990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922986.1;locus_tag=MK542_07990;product=YcxB family protein;pseudo=true;transl_table=11 JAKUZA010000049.1 Genbank gene 15573 16727 . + . ID=gene-MK542_07995;Name=MK542_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_07995 JAKUZA010000049.1 GeneMarkS-2+ CDS 15573 16727 . + 0 ID=cds-MCY7218101.1;Parent=gene-MK542_07995;Dbxref=NCBI_GP:MCY7218101.1;Name=MCY7218101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_07995;product=hypothetical protein;protein_id=MCY7218101.1;transl_table=11 JAKUZA010000049.1 Genbank gene 16697 17176 . + . ID=gene-MK542_08000;Name=MK542_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08000 JAKUZA010000049.1 GeneMarkS-2+ CDS 16697 17176 . + 0 ID=cds-MCY7218102.1;Parent=gene-MK542_08000;Dbxref=NCBI_GP:MCY7218102.1;Name=MCY7218102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08000;product=hypothetical protein;protein_id=MCY7218102.1;transl_table=11 JAKUZA010000049.1 Genbank gene 17516 20158 . + . ID=gene-MK542_08005;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=MK542_08005 JAKUZA010000049.1 Protein Homology CDS 17516 20158 . + 0 ID=cds-MCY7218103.1;Parent=gene-MK542_08005;Dbxref=NCBI_GP:MCY7218103.1;Name=MCY7218103.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604236.1;locus_tag=MK542_08005;product=DNA polymerase I;protein_id=MCY7218103.1;transl_table=11 JAKUZA010000049.1 Genbank gene 20432 20869 . + . ID=gene-MK542_08010;Name=MK542_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08010 JAKUZA010000049.1 Protein Homology CDS 20432 20869 . + 0 ID=cds-MCY7218104.1;Parent=gene-MK542_08010;Dbxref=NCBI_GP:MCY7218104.1;Name=MCY7218104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754880.1;locus_tag=MK542_08010;product=CoA-binding protein;protein_id=MCY7218104.1;transl_table=11 JAKUZA010000049.1 Genbank gene 20870 21373 . + . ID=gene-MK542_08015;Name=MK542_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08015 JAKUZA010000049.1 Protein Homology CDS 20870 21373 . + 0 ID=cds-MCY7218105.1;Parent=gene-MK542_08015;Dbxref=NCBI_GP:MCY7218105.1;Name=MCY7218105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927288.1;locus_tag=MK542_08015;product=kinase;protein_id=MCY7218105.1;transl_table=11 JAKUZA010000049.1 Genbank gene 21416 22255 . - . ID=gene-MK542_08020;Name=MK542_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08020 JAKUZA010000049.1 Protein Homology CDS 21416 22255 . - 0 ID=cds-MCY7218106.1;Parent=gene-MK542_08020;Dbxref=NCBI_GP:MCY7218106.1;Name=MCY7218106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592000.1;locus_tag=MK542_08020;product=DUF975 family protein;protein_id=MCY7218106.1;transl_table=11 JAKUZA010000049.1 Genbank gene 22403 23545 . + . ID=gene-MK542_08025;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=MK542_08025 JAKUZA010000049.1 Protein Homology CDS 22403 23545 . + 0 ID=cds-MCY7218107.1;Parent=gene-MK542_08025;Dbxref=NCBI_GP:MCY7218107.1;Name=MCY7218107.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184131.1;locus_tag=MK542_08025;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=MCY7218107.1;transl_table=11 JAKUZA010000049.1 Genbank gene 23882 25699 . + . ID=gene-MK542_08030;Name=MK542_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08030 JAKUZA010000049.1 Protein Homology CDS 23882 25699 . + 0 ID=cds-MCY7218108.1;Parent=gene-MK542_08030;Dbxref=NCBI_GP:MCY7218108.1;Name=MCY7218108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220923.1;locus_tag=MK542_08030;product=acyltransferase;protein_id=MCY7218108.1;transl_table=11 JAKUZA010000049.1 Genbank pseudogene 26222 26427 . - . ID=gene-MK542_08035;Name=MK542_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_08035;pseudo=true JAKUZA010000049.1 Protein Homology CDS 26222 26427 . - 2 ID=cds-MK542_08035;Parent=gene-MK542_08035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_053338614.1;locus_tag=MK542_08035;product=IS481 family transposase;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000004.1 1 3484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000004.1 Genbank region 1 3484 . + . ID=JAKUZA010000004.1:1..3484;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000004.1 Genbank gene 203 3073 . - . ID=gene-MK542_00355;Name=MK542_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00355 JAKUZA010000004.1 Protein Homology CDS 203 3073 . - 0 ID=cds-MCY7216634.1;Parent=gene-MK542_00355;Dbxref=NCBI_GP:MCY7216634.1;Name=MCY7216634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621070.1;locus_tag=MK542_00355;product=hypothetical protein;protein_id=MCY7216634.1;transl_table=11 ##sequence-region JAKUZA010000050.1 1 5857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000050.1 Genbank region 1 5857 . + . ID=JAKUZA010000050.1:1..5857;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000050.1 Genbank gene 282 5470 . + . ID=gene-MK542_08040;Name=MK542_08040;end_range=5470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08040;partial=true JAKUZA010000050.1 Protein Homology CDS 282 5470 . + 0 ID=cds-MCY7218109.1;Parent=gene-MK542_08040;Dbxref=NCBI_GP:MCY7218109.1;Name=MCY7218109.1;end_range=5470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729613.1;locus_tag=MK542_08040;partial=true;product=MucBP domain-containing protein;protein_id=MCY7218109.1;transl_table=11 JAKUZA010000050.1 Genbank gene 5527 5857 . + . ID=gene-MK542_08045;Name=MK542_08045;end_range=5857,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08045;partial=true;start_range=.,5527 JAKUZA010000050.1 Protein Homology CDS 5527 5857 . + 2 ID=cds-MCY7218110.1;Parent=gene-MK542_08045;Dbxref=NCBI_GP:MCY7218110.1;Name=MCY7218110.1;end_range=5857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729613.1;locus_tag=MK542_08045;partial=true;product=peptidase;protein_id=MCY7218110.1;start_range=.,5527;transl_table=11 ##sequence-region JAKUZA010000051.1 1 11093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000051.1 Genbank region 1 11093 . + . ID=JAKUZA010000051.1:1..11093;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000051.1 Genbank gene 1 795 . + . ID=gene-MK542_08050;Name=MK542_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08050;partial=true;start_range=.,1 JAKUZA010000051.1 Protein Homology CDS 1 795 . + 0 ID=cds-MCY7218111.1;Parent=gene-MK542_08050;Dbxref=NCBI_GP:MCY7218111.1;Name=MCY7218111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019142.2;locus_tag=MK542_08050;partial=true;product=G5 domain-containing protein;protein_id=MCY7218111.1;start_range=.,1;transl_table=11 JAKUZA010000051.1 Genbank gene 1126 11093 . + . ID=gene-MK542_08055;Name=MK542_08055;end_range=11093,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08055;partial=true JAKUZA010000051.1 Protein Homology CDS 1126 11093 . + 0 ID=cds-MCY7218112.1;Parent=gene-MK542_08055;Dbxref=NCBI_GP:MCY7218112.1;Name=MCY7218112.1;end_range=11093,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465576.1;locus_tag=MK542_08055;partial=true;product=G5 domain-containing protein;protein_id=MCY7218112.1;transl_table=11 ##sequence-region JAKUZA010000052.1 1 6216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000052.1 Genbank region 1 6216 . + . ID=JAKUZA010000052.1:1..6216;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000052.1 Genbank gene 51 124 . - . ID=gene-MK542_08060;Name=MK542_08060;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08060 JAKUZA010000052.1 tRNAscan-SE tRNA 51 124 . - . ID=rna-MK542_08060;Parent=gene-MK542_08060;anticodon=(pos:complement(88..90));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08060;product=tRNA-Ile JAKUZA010000052.1 tRNAscan-SE exon 51 124 . - . ID=exon-MK542_08060-1;Parent=rna-MK542_08060;anticodon=(pos:complement(88..90));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08060;product=tRNA-Ile JAKUZA010000052.1 Genbank gene 138 211 . - . ID=gene-MK542_08065;Name=MK542_08065;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08065 JAKUZA010000052.1 tRNAscan-SE tRNA 138 211 . - . ID=rna-MK542_08065;Parent=gene-MK542_08065;anticodon=(pos:complement(175..177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08065;product=tRNA-Met JAKUZA010000052.1 tRNAscan-SE exon 138 211 . - . ID=exon-MK542_08065-1;Parent=rna-MK542_08065;anticodon=(pos:complement(175..177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08065;product=tRNA-Met JAKUZA010000052.1 Genbank gene 217 290 . - . ID=gene-MK542_08070;Name=MK542_08070;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08070 JAKUZA010000052.1 tRNAscan-SE tRNA 217 290 . - . ID=rna-MK542_08070;Parent=gene-MK542_08070;anticodon=(pos:complement(254..256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08070;product=tRNA-Pro JAKUZA010000052.1 tRNAscan-SE exon 217 290 . - . ID=exon-MK542_08070-1;Parent=rna-MK542_08070;anticodon=(pos:complement(254..256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08070;product=tRNA-Pro JAKUZA010000052.1 Genbank gene 332 405 . - . ID=gene-MK542_08075;Name=MK542_08075;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08075 JAKUZA010000052.1 tRNAscan-SE tRNA 332 405 . - . ID=rna-MK542_08075;Parent=gene-MK542_08075;anticodon=(pos:complement(369..371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08075;product=tRNA-Arg JAKUZA010000052.1 tRNAscan-SE exon 332 405 . - . ID=exon-MK542_08075-1;Parent=rna-MK542_08075;anticodon=(pos:complement(369..371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08075;product=tRNA-Arg JAKUZA010000052.1 Genbank gene 421 506 . - . ID=gene-MK542_08080;Name=MK542_08080;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08080 JAKUZA010000052.1 tRNAscan-SE tRNA 421 506 . - . ID=rna-MK542_08080;Parent=gene-MK542_08080;anticodon=(pos:complement(470..472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08080;product=tRNA-Leu JAKUZA010000052.1 tRNAscan-SE exon 421 506 . - . ID=exon-MK542_08080-1;Parent=rna-MK542_08080;anticodon=(pos:complement(470..472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08080;product=tRNA-Leu JAKUZA010000052.1 Genbank gene 512 583 . - . ID=gene-MK542_08085;Name=MK542_08085;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08085 JAKUZA010000052.1 tRNAscan-SE tRNA 512 583 . - . ID=rna-MK542_08085;Parent=gene-MK542_08085;anticodon=(pos:complement(549..551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08085;product=tRNA-Gly JAKUZA010000052.1 tRNAscan-SE exon 512 583 . - . ID=exon-MK542_08085-1;Parent=rna-MK542_08085;anticodon=(pos:complement(549..551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08085;product=tRNA-Gly JAKUZA010000052.1 Genbank gene 599 671 . - . ID=gene-MK542_08090;Name=MK542_08090;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08090 JAKUZA010000052.1 tRNAscan-SE tRNA 599 671 . - . ID=rna-MK542_08090;Parent=gene-MK542_08090;anticodon=(pos:complement(636..638));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08090;product=tRNA-Thr JAKUZA010000052.1 tRNAscan-SE exon 599 671 . - . ID=exon-MK542_08090-1;Parent=rna-MK542_08090;anticodon=(pos:complement(636..638));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08090;product=tRNA-Thr JAKUZA010000052.1 Genbank gene 689 770 . - . ID=gene-MK542_08095;Name=MK542_08095;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08095 JAKUZA010000052.1 tRNAscan-SE tRNA 689 770 . - . ID=rna-MK542_08095;Parent=gene-MK542_08095;anticodon=(pos:complement(734..736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08095;product=tRNA-Leu JAKUZA010000052.1 tRNAscan-SE exon 689 770 . - . ID=exon-MK542_08095-1;Parent=rna-MK542_08095;anticodon=(pos:complement(734..736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08095;product=tRNA-Leu JAKUZA010000052.1 Genbank gene 776 848 . - . ID=gene-MK542_08100;Name=MK542_08100;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08100 JAKUZA010000052.1 tRNAscan-SE tRNA 776 848 . - . ID=rna-MK542_08100;Parent=gene-MK542_08100;anticodon=(pos:complement(813..815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08100;product=tRNA-Lys JAKUZA010000052.1 tRNAscan-SE exon 776 848 . - . ID=exon-MK542_08100-1;Parent=rna-MK542_08100;anticodon=(pos:complement(813..815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08100;product=tRNA-Lys JAKUZA010000052.1 Genbank gene 926 998 . - . ID=gene-MK542_08105;Name=MK542_08105;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08105 JAKUZA010000052.1 tRNAscan-SE tRNA 926 998 . - . ID=rna-MK542_08105;Parent=gene-MK542_08105;anticodon=(pos:complement(963..965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08105;product=tRNA-Asp JAKUZA010000052.1 tRNAscan-SE exon 926 998 . - . ID=exon-MK542_08105-1;Parent=rna-MK542_08105;anticodon=(pos:complement(963..965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08105;product=tRNA-Asp JAKUZA010000052.1 Genbank gene 1003 1075 . - . ID=gene-MK542_08110;Name=MK542_08110;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08110 JAKUZA010000052.1 tRNAscan-SE tRNA 1003 1075 . - . ID=rna-MK542_08110;Parent=gene-MK542_08110;anticodon=(pos:complement(1040..1042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08110;product=tRNA-Val JAKUZA010000052.1 tRNAscan-SE exon 1003 1075 . - . ID=exon-MK542_08110-1;Parent=rna-MK542_08110;anticodon=(pos:complement(1040..1042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08110;product=tRNA-Val JAKUZA010000052.1 Genbank gene 1105 1220 . - . ID=gene-MK542_08115;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=MK542_08115 JAKUZA010000052.1 cmsearch rRNA 1105 1220 . - . ID=rna-MK542_08115;Parent=gene-MK542_08115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08115;product=5S ribosomal RNA JAKUZA010000052.1 cmsearch exon 1105 1220 . - . ID=exon-MK542_08115-1;Parent=rna-MK542_08115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08115;product=5S ribosomal RNA JAKUZA010000052.1 Genbank gene 1321 4219 . - . ID=gene-MK542_08120;Name=MK542_08120;gbkey=Gene;gene_biotype=rRNA;locus_tag=MK542_08120 JAKUZA010000052.1 cmsearch rRNA 1321 4219 . - . ID=rna-MK542_08120;Parent=gene-MK542_08120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08120;product=23S ribosomal RNA JAKUZA010000052.1 cmsearch exon 1321 4219 . - . ID=exon-MK542_08120-1;Parent=rna-MK542_08120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08120;product=23S ribosomal RNA JAKUZA010000052.1 Genbank gene 4348 4420 . - . ID=gene-MK542_08125;Name=MK542_08125;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08125 JAKUZA010000052.1 tRNAscan-SE tRNA 4348 4420 . - . ID=rna-MK542_08125;Parent=gene-MK542_08125;anticodon=(pos:complement(4385..4387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08125;product=tRNA-Ala JAKUZA010000052.1 tRNAscan-SE exon 4348 4420 . - . ID=exon-MK542_08125-1;Parent=rna-MK542_08125;anticodon=(pos:complement(4385..4387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08125;product=tRNA-Ala JAKUZA010000052.1 Genbank gene 4473 6029 . - . ID=gene-MK542_08130;Name=MK542_08130;gbkey=Gene;gene_biotype=rRNA;locus_tag=MK542_08130 JAKUZA010000052.1 cmsearch rRNA 4473 6029 . - . ID=rna-MK542_08130;Parent=gene-MK542_08130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08130;product=16S ribosomal RNA JAKUZA010000052.1 cmsearch exon 4473 6029 . - . ID=exon-MK542_08130-1;Parent=rna-MK542_08130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08130;product=16S ribosomal RNA ##sequence-region JAKUZA010000053.1 1 14280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000053.1 Genbank region 1 14280 . + . ID=JAKUZA010000053.1:1..14280;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000053.1 Genbank gene 36 965 . - . ID=gene-MK542_08135;Name=MK542_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08135 JAKUZA010000053.1 Protein Homology CDS 36 965 . - 0 ID=cds-MCY7218113.1;Parent=gene-MK542_08135;Dbxref=NCBI_GP:MCY7218113.1;Name=MCY7218113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006154193.1;locus_tag=MK542_08135;product=U32 family peptidase;protein_id=MCY7218113.1;transl_table=11 JAKUZA010000053.1 Genbank gene 1095 1394 . + . ID=gene-MK542_08140;Name=MK542_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08140 JAKUZA010000053.1 Protein Homology CDS 1095 1394 . + 0 ID=cds-MCY7218114.1;Parent=gene-MK542_08140;Dbxref=NCBI_GP:MCY7218114.1;Name=MCY7218114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034955.1;locus_tag=MK542_08140;product=DUF3270 domain-containing protein;protein_id=MCY7218114.1;transl_table=11 JAKUZA010000053.1 Genbank gene 1449 2258 . - . ID=gene-MK542_08145;Name=MK542_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08145 JAKUZA010000053.1 Protein Homology CDS 1449 2258 . - 0 ID=cds-MCY7218115.1;Parent=gene-MK542_08145;Dbxref=NCBI_GP:MCY7218115.1;Name=MCY7218115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589466.1;locus_tag=MK542_08145;product=C39 family peptidase;protein_id=MCY7218115.1;transl_table=11 JAKUZA010000053.1 Genbank gene 2340 2789 . - . ID=gene-MK542_08150;Name=MK542_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08150 JAKUZA010000053.1 Protein Homology CDS 2340 2789 . - 0 ID=cds-MCY7218116.1;Parent=gene-MK542_08150;Dbxref=NCBI_GP:MCY7218116.1;Name=MCY7218116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909316.1;locus_tag=MK542_08150;product=YtxH domain-containing protein;protein_id=MCY7218116.1;transl_table=11 JAKUZA010000053.1 Genbank gene 2805 3200 . - . ID=gene-MK542_08155;Name=MK542_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08155 JAKUZA010000053.1 Protein Homology CDS 2805 3200 . - 0 ID=cds-MCY7218117.1;Parent=gene-MK542_08155;Dbxref=NCBI_GP:MCY7218117.1;Name=MCY7218117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895030.1;locus_tag=MK542_08155;product=DUF948 domain-containing protein;protein_id=MCY7218117.1;transl_table=11 JAKUZA010000053.1 Genbank gene 3213 3992 . - . ID=gene-MK542_08160;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=MK542_08160 JAKUZA010000053.1 Protein Homology CDS 3213 3992 . - 0 ID=cds-MCY7218118.1;Parent=gene-MK542_08160;Dbxref=NCBI_GP:MCY7218118.1;Name=MCY7218118.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894973.1;locus_tag=MK542_08160;product=prolipoprotein diacylglyceryl transferase;protein_id=MCY7218118.1;transl_table=11 JAKUZA010000053.1 Genbank gene 3985 4920 . - . ID=gene-MK542_08165;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=MK542_08165 JAKUZA010000053.1 Protein Homology CDS 3985 4920 . - 0 ID=cds-MCY7218119.1;Parent=gene-MK542_08165;Dbxref=NCBI_GP:MCY7218119.1;Name=MCY7218119.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605214.1;locus_tag=MK542_08165;product=HPr(Ser) kinase/phosphatase;protein_id=MCY7218119.1;transl_table=11 JAKUZA010000053.1 Genbank pseudogene 5148 5351 . + . ID=gene-MK542_08170;Name=MK542_08170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_08170;pseudo=true JAKUZA010000053.1 Protein Homology CDS 5148 5351 . + 0 ID=cds-MK542_08170;Parent=gene-MK542_08170;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836763.1;locus_tag=MK542_08170;product=phosphoesterase;pseudo=true;transl_table=11 JAKUZA010000053.1 Genbank gene 5345 6136 . - . ID=gene-MK542_08175;Name=MK542_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08175 JAKUZA010000053.1 Protein Homology CDS 5345 6136 . - 0 ID=cds-MCY7218120.1;Parent=gene-MK542_08175;Dbxref=NCBI_GP:MCY7218120.1;Name=MCY7218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187457.1;locus_tag=MK542_08175;product=DUF2785 domain-containing protein;protein_id=MCY7218120.1;transl_table=11 JAKUZA010000053.1 Genbank gene 6225 8921 . - . ID=gene-MK542_08180;Name=MK542_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08180 JAKUZA010000053.1 Protein Homology CDS 6225 8921 . - 0 ID=cds-MCY7218121.1;Parent=gene-MK542_08180;Dbxref=NCBI_GP:MCY7218121.1;Name=MCY7218121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032417.1;locus_tag=MK542_08180;product=cation-translocating P-type ATPase;protein_id=MCY7218121.1;transl_table=11 JAKUZA010000053.1 Genbank gene 9113 9517 . - . ID=gene-MK542_08185;Name=MK542_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08185 JAKUZA010000053.1 Protein Homology CDS 9113 9517 . - 0 ID=cds-MCY7218122.1;Parent=gene-MK542_08185;Dbxref=NCBI_GP:MCY7218122.1;Name=MCY7218122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073269.1;locus_tag=MK542_08185;product=DUF1934 domain-containing protein;protein_id=MCY7218122.1;transl_table=11 JAKUZA010000053.1 Genbank gene 9636 10937 . + . ID=gene-MK542_08190;Name=MK542_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08190 JAKUZA010000053.1 Protein Homology CDS 9636 10937 . + 0 ID=cds-MCY7218123.1;Parent=gene-MK542_08190;Dbxref=NCBI_GP:MCY7218123.1;Name=MCY7218123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904212.1;locus_tag=MK542_08190;product=HD domain-containing protein;protein_id=MCY7218123.1;transl_table=11 JAKUZA010000053.1 Genbank gene 10939 11748 . + . ID=gene-MK542_08195;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=MK542_08195 JAKUZA010000053.1 Protein Homology CDS 10939 11748 . + 0 ID=cds-MCY7218124.1;Parent=gene-MK542_08195;Dbxref=NCBI_GP:MCY7218124.1;Name=MCY7218124.1;gbkey=CDS;gene=yidA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604638.1;locus_tag=MK542_08195;product=sugar-phosphatase;protein_id=MCY7218124.1;transl_table=11 JAKUZA010000053.1 Genbank gene 11748 12962 . + . ID=gene-MK542_08200;Name=MK542_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08200 JAKUZA010000053.1 Protein Homology CDS 11748 12962 . + 0 ID=cds-MCY7218125.1;Parent=gene-MK542_08200;Dbxref=NCBI_GP:MCY7218125.1;Name=MCY7218125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895903.1;locus_tag=MK542_08200;product=aminoacyltransferase;protein_id=MCY7218125.1;transl_table=11 JAKUZA010000053.1 Genbank gene 12977 14212 . + . ID=gene-MK542_08205;Name=MK542_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08205 JAKUZA010000053.1 Protein Homology CDS 12977 14212 . + 0 ID=cds-MCY7218126.1;Parent=gene-MK542_08205;Dbxref=NCBI_GP:MCY7218126.1;Name=MCY7218126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895904.1;locus_tag=MK542_08205;product=aminoacyltransferase;protein_id=MCY7218126.1;transl_table=11 ##sequence-region JAKUZA010000054.1 1 7565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000054.1 Genbank region 1 7565 . + . ID=JAKUZA010000054.1:1..7565;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000054.1 Genbank pseudogene 5 427 . + . ID=gene-MK542_08210;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=MK542_08210;pseudo=true JAKUZA010000054.1 Protein Homology CDS 5 427 . + 0 ID=cds-MK542_08210;Parent=gene-MK542_08210;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775157.1;locus_tag=MK542_08210;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 JAKUZA010000054.1 Genbank gene 819 1346 . + . ID=gene-MK542_08215;Name=MK542_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08215 JAKUZA010000054.1 Protein Homology CDS 819 1346 . + 0 ID=cds-MCY7218127.1;Parent=gene-MK542_08215;Dbxref=NCBI_GP:MCY7218127.1;Name=MCY7218127.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251415.1;locus_tag=MK542_08215;product=YqeG family HAD IIIA-type phosphatase;protein_id=MCY7218127.1;transl_table=11 JAKUZA010000054.1 Genbank gene 1349 2455 . + . ID=gene-MK542_08220;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=MK542_08220 JAKUZA010000054.1 Protein Homology CDS 1349 2455 . + 0 ID=cds-MCY7218128.1;Parent=gene-MK542_08220;Dbxref=NCBI_GP:MCY7218128.1;Name=MCY7218128.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391231.1;locus_tag=MK542_08220;product=ribosome biogenesis GTPase YqeH;protein_id=MCY7218128.1;transl_table=11 JAKUZA010000054.1 Genbank gene 2561 2872 . + . ID=gene-MK542_08225;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=MK542_08225 JAKUZA010000054.1 Protein Homology CDS 2561 2872 . + 0 ID=cds-MCY7218129.1;Parent=gene-MK542_08225;Dbxref=NCBI_GP:MCY7218129.1;Name=MCY7218129.1;Ontology_term=GO:0008150,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060164.1;locus_tag=MK542_08225;product=ribosome assembly RNA-binding protein YhbY;protein_id=MCY7218129.1;transl_table=11 JAKUZA010000054.1 Genbank gene 2901 3530 . + . ID=gene-MK542_08230;Name=MK542_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08230 JAKUZA010000054.1 Protein Homology CDS 2901 3530 . + 0 ID=cds-MCY7218130.1;Parent=gene-MK542_08230;Dbxref=NCBI_GP:MCY7218130.1;Name=MCY7218130.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151307.1;locus_tag=MK542_08230;product=nicotinate-nucleotide adenylyltransferase;protein_id=MCY7218130.1;transl_table=11 JAKUZA010000054.1 Genbank gene 3530 4132 . + . ID=gene-MK542_08235;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=MK542_08235 JAKUZA010000054.1 Protein Homology CDS 3530 4132 . + 0 ID=cds-MCY7218131.1;Parent=gene-MK542_08235;Dbxref=NCBI_GP:MCY7218131.1;Name=MCY7218131.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910414.1;locus_tag=MK542_08235;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=MCY7218131.1;transl_table=11 JAKUZA010000054.1 Genbank gene 4142 4507 . + . ID=gene-MK542_08240;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=MK542_08240 JAKUZA010000054.1 Protein Homology CDS 4142 4507 . + 0 ID=cds-MCY7218132.1;Parent=gene-MK542_08240;Dbxref=NCBI_GP:MCY7218132.1;Name=MCY7218132.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903960.1;locus_tag=MK542_08240;product=ribosome silencing factor;protein_id=MCY7218132.1;transl_table=11 JAKUZA010000054.1 Genbank gene 4583 5317 . + . ID=gene-MK542_08245;Name=MK542_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08245 JAKUZA010000054.1 Protein Homology CDS 4583 5317 . + 0 ID=cds-MCY7218133.1;Parent=gene-MK542_08245;Dbxref=NCBI_GP:MCY7218133.1;Name=MCY7218133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605324.1;locus_tag=MK542_08245;product=class I SAM-dependent methyltransferase;protein_id=MCY7218133.1;transl_table=11 JAKUZA010000054.1 Genbank gene 5319 6410 . + . ID=gene-MK542_08250;Name=MK542_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08250 JAKUZA010000054.1 Protein Homology CDS 5319 6410 . + 0 ID=cds-MCY7218134.1;Parent=gene-MK542_08250;Dbxref=NCBI_GP:MCY7218134.1;Name=MCY7218134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754700.1;locus_tag=MK542_08250;product=nucleotidyltransferase;protein_id=MCY7218134.1;transl_table=11 JAKUZA010000054.1 Genbank gene 6549 7430 . + . ID=gene-MK542_08255;Name=MK542_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08255 JAKUZA010000054.1 Protein Homology CDS 6549 7430 . + 0 ID=cds-MCY7218135.1;Parent=gene-MK542_08255;Dbxref=NCBI_GP:MCY7218135.1;Name=MCY7218135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=MK542_08255;product=fructose-bisphosphate aldolase;protein_id=MCY7218135.1;transl_table=11 ##sequence-region JAKUZA010000055.1 1 25618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000055.1 Genbank region 1 25618 . + . ID=JAKUZA010000055.1:1..25618;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000055.1 Genbank direct_repeat 44 289 . + . ID=id-JAKUZA010000055.1:44..289;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=46..74;rpt_unit_seq=gtctcaattccttataggtaaggtataac JAKUZA010000055.1 Genbank gene 454 942 . - . ID=gene-MK542_08260;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=MK542_08260 JAKUZA010000055.1 Protein Homology CDS 454 942 . - 0 ID=cds-MCY7218136.1;Parent=gene-MK542_08260;Dbxref=NCBI_GP:MCY7218136.1;Name=MCY7218136.1;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR00287.1;locus_tag=MK542_08260;product=CRISPR-associated endonuclease Cas1;protein_id=MCY7218136.1;transl_table=11 JAKUZA010000055.1 Genbank gene 1299 2027 . - . ID=gene-MK542_08265;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=MK542_08265 JAKUZA010000055.1 Protein Homology CDS 1299 2027 . - 0 ID=cds-MCY7218137.1;Parent=gene-MK542_08265;Dbxref=NCBI_GP:MCY7218137.1;Name=MCY7218137.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176358.1;locus_tag=MK542_08265;product=CRISPR-associated endoribonuclease Cas6;protein_id=MCY7218137.1;transl_table=11 JAKUZA010000055.1 Genbank gene 2417 3598 . - . ID=gene-MK542_08270;Name=MK542_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08270 JAKUZA010000055.1 Protein Homology CDS 2417 3598 . - 0 ID=cds-MCY7218138.1;Parent=gene-MK542_08270;Dbxref=NCBI_GP:MCY7218138.1;Name=MCY7218138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649441.1;locus_tag=MK542_08270;product=site-specific integrase;protein_id=MCY7218138.1;transl_table=11 JAKUZA010000055.1 Genbank gene 3617 3850 . - . ID=gene-MK542_08275;Name=MK542_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08275 JAKUZA010000055.1 Protein Homology CDS 3617 3850 . - 0 ID=cds-MCY7218139.1;Parent=gene-MK542_08275;Dbxref=NCBI_GP:MCY7218139.1;Name=MCY7218139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198708.1;locus_tag=MK542_08275;product=DUF3173 domain-containing protein;protein_id=MCY7218139.1;transl_table=11 JAKUZA010000055.1 Genbank gene 3854 4420 . - . ID=gene-MK542_08280;Name=MK542_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08280 JAKUZA010000055.1 Protein Homology CDS 3854 4420 . - 0 ID=cds-MCY7218140.1;Parent=gene-MK542_08280;Dbxref=NCBI_GP:MCY7218140.1;Name=MCY7218140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031190.1;locus_tag=MK542_08280;product=replication protein;protein_id=MCY7218140.1;transl_table=11 JAKUZA010000055.1 Genbank gene 4555 5169 . - . ID=gene-MK542_08285;Name=MK542_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08285 JAKUZA010000055.1 Protein Homology CDS 4555 5169 . - 0 ID=cds-MCY7218141.1;Parent=gene-MK542_08285;Dbxref=NCBI_GP:MCY7218141.1;Name=MCY7218141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303361.1;locus_tag=MK542_08285;product=hypothetical protein;protein_id=MCY7218141.1;transl_table=11 JAKUZA010000055.1 Genbank gene 5171 6247 . - . ID=gene-MK542_08290;Name=MK542_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08290 JAKUZA010000055.1 Protein Homology CDS 5171 6247 . - 0 ID=cds-MCY7218142.1;Parent=gene-MK542_08290;Dbxref=NCBI_GP:MCY7218142.1;Name=MCY7218142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002272712.1;locus_tag=MK542_08290;product=cell division protein FtsK;protein_id=MCY7218142.1;transl_table=11 JAKUZA010000055.1 Genbank gene 6247 6561 . - . ID=gene-MK542_08295;Name=MK542_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08295 JAKUZA010000055.1 Protein Homology CDS 6247 6561 . - 0 ID=cds-MCY7218143.1;Parent=gene-MK542_08295;Dbxref=NCBI_GP:MCY7218143.1;Name=MCY7218143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002285155.1;locus_tag=MK542_08295;product=hypothetical protein;protein_id=MCY7218143.1;transl_table=11 JAKUZA010000055.1 Genbank gene 6804 8189 . - . ID=gene-MK542_08300;Name=MK542_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08300 JAKUZA010000055.1 GeneMarkS-2+ CDS 6804 8189 . - 0 ID=cds-MCY7218144.1;Parent=gene-MK542_08300;Dbxref=NCBI_GP:MCY7218144.1;Name=MCY7218144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08300;product=hypothetical protein;protein_id=MCY7218144.1;transl_table=11 JAKUZA010000055.1 Genbank gene 8397 9217 . - . ID=gene-MK542_08305;Name=MK542_08305;end_range=9217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08305;partial=true JAKUZA010000055.1 Protein Homology CDS 8397 9217 . - 2 ID=cds-MCY7218145.1;Parent=gene-MK542_08305;Dbxref=NCBI_GP:MCY7218145.1;Name=MCY7218145.1;end_range=9217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068509.1;locus_tag=MK542_08305;partial=true;product=nucleotidyltransferase;protein_id=MCY7218145.1;transl_table=11 JAKUZA010000055.1 Genbank gene 9266 9854 . - . ID=gene-MK542_08310;Name=MK542_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08310;partial=true;start_range=.,9266 JAKUZA010000055.1 Protein Homology CDS 9266 9854 . - 0 ID=cds-MCY7218146.1;Parent=gene-MK542_08310;Dbxref=NCBI_GP:MCY7218146.1;Name=MCY7218146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129936.1;locus_tag=MK542_08310;partial=true;product=nucleotidyltransferase;protein_id=MCY7218146.1;start_range=.,9266;transl_table=11 JAKUZA010000055.1 Genbank gene 9867 10559 . - . ID=gene-MK542_08315;Name=MK542_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08315 JAKUZA010000055.1 Protein Homology CDS 9867 10559 . - 0 ID=cds-MCY7218147.1;Parent=gene-MK542_08315;Dbxref=NCBI_GP:MCY7218147.1;Name=MCY7218147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000404289.1;locus_tag=MK542_08315;product=hypothetical protein;protein_id=MCY7218147.1;transl_table=11 JAKUZA010000055.1 Genbank gene 10561 15273 . - . ID=gene-MK542_08320;Name=MK542_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08320 JAKUZA010000055.1 Protein Homology CDS 10561 15273 . - 0 ID=cds-MCY7218148.1;Parent=gene-MK542_08320;Dbxref=NCBI_GP:MCY7218148.1;Name=MCY7218148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068504.1;locus_tag=MK542_08320;product=DEAD/DEAH box helicase family protein;protein_id=MCY7218148.1;transl_table=11 JAKUZA010000055.1 Genbank gene 15630 15995 . - . ID=gene-MK542_08325;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=MK542_08325 JAKUZA010000055.1 Protein Homology CDS 15630 15995 . - 0 ID=cds-MCY7218149.1;Parent=gene-MK542_08325;Dbxref=NCBI_GP:MCY7218149.1;Name=MCY7218149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=MK542_08325;product=50S ribosomal protein L7/L12;protein_id=MCY7218149.1;transl_table=11 JAKUZA010000055.1 Genbank gene 16070 16570 . - . ID=gene-MK542_08330;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=MK542_08330 JAKUZA010000055.1 Protein Homology CDS 16070 16570 . - 0 ID=cds-MCY7218150.1;Parent=gene-MK542_08330;Dbxref=NCBI_GP:MCY7218150.1;Name=MCY7218150.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=MK542_08330;product=50S ribosomal protein L10;protein_id=MCY7218150.1;transl_table=11 JAKUZA010000055.1 cmsearch sequence_feature 16609 16743 . - . ID=id-JAKUZA010000055.1:16609..16743;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAKUZA010000055.1 Genbank gene 16839 17636 . - . ID=gene-MK542_08335;Name=MK542_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08335 JAKUZA010000055.1 Protein Homology CDS 16839 17636 . - 0 ID=cds-MCY7218151.1;Parent=gene-MK542_08335;Dbxref=NCBI_GP:MCY7218151.1;Name=MCY7218151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254803.1;locus_tag=MK542_08335;product=formate/nitrite transporter family protein;protein_id=MCY7218151.1;transl_table=11 JAKUZA010000055.1 Genbank gene 17744 18694 . - . ID=gene-MK542_08340;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=MK542_08340 JAKUZA010000055.1 Protein Homology CDS 17744 18694 . - 0 ID=cds-MCY7218152.1;Parent=gene-MK542_08340;Dbxref=NCBI_GP:MCY7218152.1;Name=MCY7218152.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909819.1;locus_tag=MK542_08340;product=homocysteine S-methyltransferase;protein_id=MCY7218152.1;transl_table=11 JAKUZA010000055.1 Genbank gene 18883 19590 . - . ID=gene-MK542_08345;Name=MK542_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08345 JAKUZA010000055.1 Protein Homology CDS 18883 19590 . - 0 ID=cds-MCY7218153.1;Parent=gene-MK542_08345;Dbxref=NCBI_GP:MCY7218153.1;Name=MCY7218153.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903635.1;locus_tag=MK542_08345;product=glucosaminidase domain-containing protein;protein_id=MCY7218153.1;transl_table=11 JAKUZA010000055.1 Genbank gene 19725 20312 . - . ID=gene-MK542_08350;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=MK542_08350 JAKUZA010000055.1 Protein Homology CDS 19725 20312 . - 0 ID=cds-MCY7218154.1;Parent=gene-MK542_08350;Dbxref=NCBI_GP:MCY7218154.1;Name=MCY7218154.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915299.1;locus_tag=MK542_08350;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=MCY7218154.1;transl_table=11 JAKUZA010000055.1 Genbank gene 20323 21552 . - . ID=gene-MK542_08355;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=MK542_08355 JAKUZA010000055.1 Protein Homology CDS 20323 21552 . - 0 ID=cds-MCY7218155.1;Parent=gene-MK542_08355;Dbxref=NCBI_GP:MCY7218155.1;Name=MCY7218155.1;Ontology_term=GO:0005524,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874765.1;locus_tag=MK542_08355;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=MCY7218155.1;transl_table=11 JAKUZA010000055.1 Genbank gene 21771 22283 . - . ID=gene-MK542_08360;Name=MK542_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08360 JAKUZA010000055.1 Protein Homology CDS 21771 22283 . - 0 ID=cds-MCY7218156.1;Parent=gene-MK542_08360;Dbxref=NCBI_GP:MCY7218156.1;Name=MCY7218156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930343.1;locus_tag=MK542_08360;product=dihydrofolate reductase;protein_id=MCY7218156.1;transl_table=11 JAKUZA010000055.1 Genbank gene 22414 23253 . - . ID=gene-MK542_08365;Name=MK542_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08365 JAKUZA010000055.1 Protein Homology CDS 22414 23253 . - 0 ID=cds-MCY7218157.1;Parent=gene-MK542_08365;Dbxref=NCBI_GP:MCY7218157.1;Name=MCY7218157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011065.1;locus_tag=MK542_08365;product=thymidylate synthase;protein_id=MCY7218157.1;transl_table=11 JAKUZA010000055.1 Genbank gene 23354 24313 . - . ID=gene-MK542_08370;Name=MK542_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08370 JAKUZA010000055.1 Protein Homology CDS 23354 24313 . - 0 ID=cds-MCY7218158.1;Parent=gene-MK542_08370;Dbxref=NCBI_GP:MCY7218158.1;Name=MCY7218158.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919069.1;locus_tag=MK542_08370;product=ROK family glucokinase;protein_id=MCY7218158.1;transl_table=11 JAKUZA010000055.1 Genbank gene 24644 25618 . - . ID=gene-MK542_08375;Name=MK542_08375;end_range=25618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08375;partial=true JAKUZA010000055.1 Protein Homology CDS 24644 25618 . - 0 ID=cds-MCY7218159.1;Parent=gene-MK542_08375;Dbxref=NCBI_GP:MCY7218159.1;Name=MCY7218159.1;end_range=25618,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019142.2;locus_tag=MK542_08375;partial=true;product=G5 domain-containing protein;protein_id=MCY7218159.1;transl_table=11 ##sequence-region JAKUZA010000056.1 1 22476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000056.1 Genbank region 1 22476 . + . ID=JAKUZA010000056.1:1..22476;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000056.1 Genbank gene 1 239 . + . ID=gene-MK542_08380;Name=MK542_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08380;partial=true;start_range=.,1 JAKUZA010000056.1 Protein Homology CDS 1 239 . + 2 ID=cds-MCY7218160.1;Parent=gene-MK542_08380;Dbxref=NCBI_GP:MCY7218160.1;Name=MCY7218160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268143.1;locus_tag=MK542_08380;partial=true;product=transposase;protein_id=MCY7218160.1;start_range=.,1;transl_table=11 JAKUZA010000056.1 Genbank gene 373 675 . - . ID=gene-MK542_08385;Name=MK542_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08385 JAKUZA010000056.1 Protein Homology CDS 373 675 . - 0 ID=cds-MCY7218161.1;Parent=gene-MK542_08385;Dbxref=NCBI_GP:MCY7218161.1;Name=MCY7218161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767202.1;locus_tag=MK542_08385;product=DUF1827 family protein;protein_id=MCY7218161.1;transl_table=11 JAKUZA010000056.1 Genbank gene 744 1193 . - . ID=gene-MK542_08390;Name=MK542_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08390 JAKUZA010000056.1 Protein Homology CDS 744 1193 . - 0 ID=cds-MCY7218162.1;Parent=gene-MK542_08390;Dbxref=NCBI_GP:MCY7218162.1;Name=MCY7218162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917540.1;locus_tag=MK542_08390;product=NUDIX hydrolase;protein_id=MCY7218162.1;transl_table=11 JAKUZA010000056.1 Genbank gene 1703 3988 . - . ID=gene-MK542_08395;Name=MK542_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08395 JAKUZA010000056.1 Protein Homology CDS 1703 3988 . - 0 ID=cds-MCY7218163.1;Parent=gene-MK542_08395;Dbxref=NCBI_GP:MCY7218163.1;Name=MCY7218163.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269743.1;locus_tag=MK542_08395;product=AAA family ATPase;protein_id=MCY7218163.1;transl_table=11 JAKUZA010000056.1 Genbank gene 4234 4464 . + . ID=gene-MK542_08400;Name=MK542_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08400 JAKUZA010000056.1 Protein Homology CDS 4234 4464 . + 0 ID=cds-MCY7218164.1;Parent=gene-MK542_08400;Dbxref=NCBI_GP:MCY7218164.1;Name=MCY7218164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592360.1;locus_tag=MK542_08400;product=DUF1797 family protein;protein_id=MCY7218164.1;transl_table=11 JAKUZA010000056.1 Genbank gene 4604 5458 . + . ID=gene-MK542_08405;Name=MK542_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08405 JAKUZA010000056.1 Protein Homology CDS 4604 5458 . + 0 ID=cds-MCY7218165.1;Parent=gene-MK542_08405;Dbxref=NCBI_GP:MCY7218165.1;Name=MCY7218165.1;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023701.1;locus_tag=MK542_08405;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=MCY7218165.1;transl_table=11 JAKUZA010000056.1 Genbank gene 5686 6159 . + . ID=gene-MK542_08410;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=MK542_08410 JAKUZA010000056.1 Protein Homology CDS 5686 6159 . + 0 ID=cds-MCY7218166.1;Parent=gene-MK542_08410;Dbxref=NCBI_GP:MCY7218166.1;Name=MCY7218166.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203678.1;locus_tag=MK542_08410;product=transcriptional regulator NrdR;protein_id=MCY7218166.1;transl_table=11 JAKUZA010000056.1 Genbank gene 6160 7308 . + . ID=gene-MK542_08415;Name=MK542_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08415 JAKUZA010000056.1 Protein Homology CDS 6160 7308 . + 0 ID=cds-MCY7218167.1;Parent=gene-MK542_08415;Dbxref=NCBI_GP:MCY7218167.1;Name=MCY7218167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909050.1;locus_tag=MK542_08415;product=DnaD domain protein;protein_id=MCY7218167.1;transl_table=11 JAKUZA010000056.1 Genbank gene 7309 8208 . + . ID=gene-MK542_08420;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=MK542_08420 JAKUZA010000056.1 Protein Homology CDS 7309 8208 . + 0 ID=cds-MCY7218168.1;Parent=gene-MK542_08420;Dbxref=NCBI_GP:MCY7218168.1;Name=MCY7218168.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918429.1;locus_tag=MK542_08420;product=primosomal protein DnaI;protein_id=MCY7218168.1;transl_table=11 JAKUZA010000056.1 Genbank gene 8205 8921 . + . ID=gene-MK542_08425;Name=MK542_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08425 JAKUZA010000056.1 Protein Homology CDS 8205 8921 . + 0 ID=cds-MCY7218169.1;Parent=gene-MK542_08425;Dbxref=NCBI_GP:MCY7218169.1;Name=MCY7218169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605757.1;locus_tag=MK542_08425;product=nitroreductase family protein;protein_id=MCY7218169.1;transl_table=11 JAKUZA010000056.1 Genbank gene 8939 10249 . + . ID=gene-MK542_08430;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=MK542_08430 JAKUZA010000056.1 Protein Homology CDS 8939 10249 . + 0 ID=cds-MCY7218170.1;Parent=gene-MK542_08430;Dbxref=NCBI_GP:MCY7218170.1;Name=MCY7218170.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=MK542_08430;product=ribosome biogenesis GTPase Der;protein_id=MCY7218170.1;transl_table=11 JAKUZA010000056.1 Genbank gene 10693 13806 . + . ID=gene-MK542_08435;Name=MK542_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08435 JAKUZA010000056.1 Protein Homology CDS 10693 13806 . + 0 ID=cds-MCY7218171.1;Parent=gene-MK542_08435;Dbxref=NCBI_GP:MCY7218171.1;Name=MCY7218171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038566.1;locus_tag=MK542_08435;product=SNF2 family helicase;protein_id=MCY7218171.1;transl_table=11 JAKUZA010000056.1 Genbank gene 13850 14515 . + . ID=gene-MK542_08440;Name=MK542_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08440 JAKUZA010000056.1 Protein Homology CDS 13850 14515 . + 0 ID=cds-MCY7218172.1;Parent=gene-MK542_08440;Dbxref=NCBI_GP:MCY7218172.1;Name=MCY7218172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190535.1;locus_tag=MK542_08440;product=cystathionine gamma-synthase;protein_id=MCY7218172.1;transl_table=11 JAKUZA010000056.1 Genbank gene 14524 15858 . + . ID=gene-MK542_08445;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=MK542_08445 JAKUZA010000056.1 Protein Homology CDS 14524 15858 . + 0 ID=cds-MCY7218173.1;Parent=gene-MK542_08445;Dbxref=NCBI_GP:MCY7218173.1;Name=MCY7218173.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605253.1;locus_tag=MK542_08445;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=MCY7218173.1;transl_table=11 JAKUZA010000056.1 Genbank gene 15868 16383 . + . ID=gene-MK542_08450;Name=MK542_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08450 JAKUZA010000056.1 Protein Homology CDS 15868 16383 . + 0 ID=cds-MCY7218174.1;Parent=gene-MK542_08450;Dbxref=NCBI_GP:MCY7218174.1;Name=MCY7218174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605252.1;locus_tag=MK542_08450;product=GNAT family N-acetyltransferase;protein_id=MCY7218174.1;transl_table=11 JAKUZA010000056.1 Genbank gene 16380 16892 . + . ID=gene-MK542_08455;Name=MK542_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08455 JAKUZA010000056.1 Protein Homology CDS 16380 16892 . + 0 ID=cds-MCY7218175.1;Parent=gene-MK542_08455;Dbxref=NCBI_GP:MCY7218175.1;Name=MCY7218175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000023.1;locus_tag=MK542_08455;product=GNAT family N-acetyltransferase;protein_id=MCY7218175.1;transl_table=11 JAKUZA010000056.1 Genbank gene 16973 18649 . + . ID=gene-MK542_08460;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=MK542_08460 JAKUZA010000056.1 Protein Homology CDS 16973 18649 . + 0 ID=cds-MCY7218176.1;Parent=gene-MK542_08460;Dbxref=NCBI_GP:MCY7218176.1;Name=MCY7218176.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000024.1;locus_tag=MK542_08460;product=endolytic transglycosylase MltG;protein_id=MCY7218176.1;transl_table=11 JAKUZA010000056.1 Genbank gene 18743 19225 . + . ID=gene-MK542_08465;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=MK542_08465 JAKUZA010000056.1 Protein Homology CDS 18743 19225 . + 0 ID=cds-MCY7218177.1;Parent=gene-MK542_08465;Dbxref=NCBI_GP:MCY7218177.1;Name=MCY7218177.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605249.1;locus_tag=MK542_08465;product=transcription elongation factor GreA;protein_id=MCY7218177.1;transl_table=11 JAKUZA010000056.1 Genbank gene 19631 20251 . + . ID=gene-MK542_08470;Name=MK542_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08470 JAKUZA010000056.1 Protein Homology CDS 19631 20251 . + 0 ID=cds-MCY7218178.1;Parent=gene-MK542_08470;Dbxref=NCBI_GP:MCY7218178.1;Name=MCY7218178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659089.1;locus_tag=MK542_08470;product=GTP pyrophosphokinase family protein;protein_id=MCY7218178.1;transl_table=11 JAKUZA010000056.1 Genbank gene 20257 20958 . + . ID=gene-MK542_08475;Name=MK542_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08475 JAKUZA010000056.1 Protein Homology CDS 20257 20958 . + 0 ID=cds-MCY7218179.1;Parent=gene-MK542_08475;Dbxref=NCBI_GP:MCY7218179.1;Name=MCY7218179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605290.1;locus_tag=MK542_08475;product=response regulator transcription factor;protein_id=MCY7218179.1;transl_table=11 JAKUZA010000056.1 Genbank gene 20942 22177 . + . ID=gene-MK542_08480;Name=MK542_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08480 JAKUZA010000056.1 Protein Homology CDS 20942 22177 . + 0 ID=cds-MCY7218180.1;Parent=gene-MK542_08480;Dbxref=NCBI_GP:MCY7218180.1;Name=MCY7218180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899723.1;locus_tag=MK542_08480;product=HAMP domain-containing histidine kinase;protein_id=MCY7218180.1;transl_table=11 ##sequence-region JAKUZA010000057.1 1 23462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000057.1 Genbank region 1 23462 . + . ID=JAKUZA010000057.1:1..23462;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000057.1 Genbank gene 85 1821 . - . ID=gene-MK542_08485;Name=MK542_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08485 JAKUZA010000057.1 Protein Homology CDS 85 1821 . - 0 ID=cds-MCY7218181.1;Parent=gene-MK542_08485;Dbxref=NCBI_GP:MCY7218181.1;Name=MCY7218181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191080.1;locus_tag=MK542_08485;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7218181.1;transl_table=11 JAKUZA010000057.1 Genbank gene 1811 3553 . - . ID=gene-MK542_08490;Name=MK542_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08490 JAKUZA010000057.1 Protein Homology CDS 1811 3553 . - 0 ID=cds-MCY7218182.1;Parent=gene-MK542_08490;Dbxref=NCBI_GP:MCY7218182.1;Name=MCY7218182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930788.1;locus_tag=MK542_08490;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7218182.1;transl_table=11 JAKUZA010000057.1 Genbank gene 3650 4837 . - . ID=gene-MK542_08495;Name=MK542_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08495 JAKUZA010000057.1 Protein Homology CDS 3650 4837 . - 0 ID=cds-MCY7218183.1;Parent=gene-MK542_08495;Dbxref=NCBI_GP:MCY7218183.1;Name=MCY7218183.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897379.1;locus_tag=MK542_08495;product=MFS transporter;protein_id=MCY7218183.1;transl_table=11 JAKUZA010000057.1 Genbank gene 4994 6340 . - . ID=gene-MK542_08500;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=MK542_08500 JAKUZA010000057.1 Protein Homology CDS 4994 6340 . - 0 ID=cds-MCY7218184.1;Parent=gene-MK542_08500;Dbxref=NCBI_GP:MCY7218184.1;Name=MCY7218184.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038477.1;locus_tag=MK542_08500;product=asparagine--tRNA ligase;protein_id=MCY7218184.1;transl_table=11 JAKUZA010000057.1 Genbank gene 6360 6728 . - . ID=gene-MK542_08505;Name=MK542_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08505 JAKUZA010000057.1 Protein Homology CDS 6360 6728 . - 0 ID=cds-MCY7218185.1;Parent=gene-MK542_08505;Dbxref=NCBI_GP:MCY7218185.1;Name=MCY7218185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809232.1;locus_tag=MK542_08505;product=VOC family protein;protein_id=MCY7218185.1;transl_table=11 JAKUZA010000057.1 Genbank gene 6731 7909 . - . ID=gene-MK542_08510;Name=MK542_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08510 JAKUZA010000057.1 Protein Homology CDS 6731 7909 . - 0 ID=cds-MCY7218186.1;Parent=gene-MK542_08510;Dbxref=NCBI_GP:MCY7218186.1;Name=MCY7218186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263279.1;locus_tag=MK542_08510;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCY7218186.1;transl_table=11 JAKUZA010000057.1 Genbank gene 7906 8394 . - . ID=gene-MK542_08515;Name=MK542_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08515 JAKUZA010000057.1 Protein Homology CDS 7906 8394 . - 0 ID=cds-MCY7218187.1;Parent=gene-MK542_08515;Dbxref=NCBI_GP:MCY7218187.1;Name=MCY7218187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914946.1;locus_tag=MK542_08515;product=DUF5590 domain-containing protein;protein_id=MCY7218187.1;transl_table=11 JAKUZA010000057.1 Genbank gene 8480 8926 . + . ID=gene-MK542_08520;Name=MK542_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08520 JAKUZA010000057.1 Protein Homology CDS 8480 8926 . + 0 ID=cds-MCY7218188.1;Parent=gene-MK542_08520;Dbxref=NCBI_GP:MCY7218188.1;Name=MCY7218188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191068.1;locus_tag=MK542_08520;product=MarR family transcriptional regulator;protein_id=MCY7218188.1;transl_table=11 JAKUZA010000057.1 Genbank gene 9016 9564 . + . ID=gene-MK542_08525;Name=MK542_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08525 JAKUZA010000057.1 Protein Homology CDS 9016 9564 . + 0 ID=cds-MCY7218189.1;Parent=gene-MK542_08525;Dbxref=NCBI_GP:MCY7218189.1;Name=MCY7218189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906345.1;locus_tag=MK542_08525;product=NAD(P)H-dependent oxidoreductase;protein_id=MCY7218189.1;transl_table=11 JAKUZA010000057.1 Genbank gene 9623 10318 . - . ID=gene-MK542_08530;Name=MK542_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08530 JAKUZA010000057.1 Protein Homology CDS 9623 10318 . - 0 ID=cds-MCY7218190.1;Parent=gene-MK542_08530;Dbxref=NCBI_GP:MCY7218190.1;Name=MCY7218190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262574.1;locus_tag=MK542_08530;product=LrgB family protein;protein_id=MCY7218190.1;transl_table=11 JAKUZA010000057.1 Genbank gene 10311 10691 . - . ID=gene-MK542_08535;Name=MK542_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08535 JAKUZA010000057.1 Protein Homology CDS 10311 10691 . - 0 ID=cds-MCY7218191.1;Parent=gene-MK542_08535;Dbxref=NCBI_GP:MCY7218191.1;Name=MCY7218191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919317.1;locus_tag=MK542_08535;product=CidA/LrgA family protein;protein_id=MCY7218191.1;transl_table=11 JAKUZA010000057.1 Genbank gene 11202 11289 . - . ID=gene-MK542_08540;Name=MK542_08540;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_08540 JAKUZA010000057.1 tRNAscan-SE tRNA 11202 11289 . - . ID=rna-MK542_08540;Parent=gene-MK542_08540;anticodon=(pos:complement(11253..11255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08540;product=tRNA-Ser JAKUZA010000057.1 tRNAscan-SE exon 11202 11289 . - . ID=exon-MK542_08540-1;Parent=rna-MK542_08540;anticodon=(pos:complement(11253..11255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_08540;product=tRNA-Ser JAKUZA010000057.1 Genbank gene 11328 12152 . - . ID=gene-MK542_08545;Name=MK542_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08545 JAKUZA010000057.1 Protein Homology CDS 11328 12152 . - 0 ID=cds-MCY7218192.1;Parent=gene-MK542_08545;Dbxref=NCBI_GP:MCY7218192.1;Name=MCY7218192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904179.1;locus_tag=MK542_08545;product=DUF695 domain-containing protein;protein_id=MCY7218192.1;transl_table=11 JAKUZA010000057.1 Genbank gene 12178 12526 . - . ID=gene-MK542_08550;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=MK542_08550 JAKUZA010000057.1 cmsearch tmRNA 12178 12526 . - . ID=rna-MK542_08550;Parent=gene-MK542_08550;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08550;product=transfer-messenger RNA JAKUZA010000057.1 cmsearch exon 12178 12526 . - . ID=exon-MK542_08550-1;Parent=rna-MK542_08550;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=MK542_08550;product=transfer-messenger RNA JAKUZA010000057.1 Genbank gene 12821 13141 . - . ID=gene-MK542_08555;Name=MK542_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08555 JAKUZA010000057.1 Protein Homology CDS 12821 13141 . - 0 ID=cds-MCY7218193.1;Parent=gene-MK542_08555;Dbxref=NCBI_GP:MCY7218193.1;Name=MCY7218193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003072027.1;locus_tag=MK542_08555;product=hypothetical protein;protein_id=MCY7218193.1;transl_table=11 JAKUZA010000057.1 Genbank gene 13153 13560 . - . ID=gene-MK542_08560;Name=MK542_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08560 JAKUZA010000057.1 Protein Homology CDS 13153 13560 . - 0 ID=cds-MCY7218194.1;Parent=gene-MK542_08560;Dbxref=NCBI_GP:MCY7218194.1;Name=MCY7218194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003072025.1;locus_tag=MK542_08560;product=helix-turn-helix domain-containing protein;protein_id=MCY7218194.1;transl_table=11 JAKUZA010000057.1 Genbank gene 13701 14381 . - . ID=gene-MK542_08565;Name=MK542_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08565 JAKUZA010000057.1 Protein Homology CDS 13701 14381 . - 0 ID=cds-MCY7218195.1;Parent=gene-MK542_08565;Dbxref=NCBI_GP:MCY7218195.1;Name=MCY7218195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589568.1;locus_tag=MK542_08565;product=TIGR02206 family membrane protein;protein_id=MCY7218195.1;transl_table=11 JAKUZA010000057.1 Genbank gene 14605 15297 . - . ID=gene-MK542_08570;Name=MK542_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08570 JAKUZA010000057.1 Protein Homology CDS 14605 15297 . - 0 ID=cds-MCY7218196.1;Parent=gene-MK542_08570;Dbxref=NCBI_GP:MCY7218196.1;Name=MCY7218196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589567.1;locus_tag=MK542_08570;product=TIGR02206 family membrane protein;protein_id=MCY7218196.1;transl_table=11 JAKUZA010000057.1 Genbank pseudogene 15301 15839 . - . ID=gene-MK542_08575;Name=MK542_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_08575;pseudo=true JAKUZA010000057.1 Protein Homology CDS 15301 15839 . - 0 ID=cds-MK542_08575;Parent=gene-MK542_08575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370851.1;locus_tag=MK542_08575;product=DUF1697 domain-containing protein;pseudo=true;transl_table=11 JAKUZA010000057.1 Genbank gene 15851 16462 . - . ID=gene-MK542_08580;Name=MK542_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08580 JAKUZA010000057.1 Protein Homology CDS 15851 16462 . - 0 ID=cds-MCY7218197.1;Parent=gene-MK542_08580;Dbxref=NCBI_GP:MCY7218197.1;Name=MCY7218197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910287.1;locus_tag=MK542_08580;product=NUDIX hydrolase;protein_id=MCY7218197.1;transl_table=11 JAKUZA010000057.1 Genbank gene 16449 17822 . - . ID=gene-MK542_08585;Name=MK542_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08585 JAKUZA010000057.1 Protein Homology CDS 16449 17822 . - 0 ID=cds-MCY7218198.1;Parent=gene-MK542_08585;Dbxref=NCBI_GP:MCY7218198.1;Name=MCY7218198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191916.1;locus_tag=MK542_08585;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=MCY7218198.1;transl_table=11 JAKUZA010000057.1 Genbank gene 17904 18950 . - . ID=gene-MK542_08590;Name=MK542_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08590 JAKUZA010000057.1 Protein Homology CDS 17904 18950 . - 0 ID=cds-MCY7218199.1;Parent=gene-MK542_08590;Dbxref=NCBI_GP:MCY7218199.1;Name=MCY7218199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130527.1;locus_tag=MK542_08590;product=D-alanine--D-alanine ligase;protein_id=MCY7218199.1;transl_table=11 JAKUZA010000057.1 Genbank gene 19099 19695 . - . ID=gene-MK542_08595;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=MK542_08595 JAKUZA010000057.1 Protein Homology CDS 19099 19695 . - 0 ID=cds-MCY7218200.1;Parent=gene-MK542_08595;Dbxref=NCBI_GP:MCY7218200.1;Name=MCY7218200.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=MK542_08595;product=recombination mediator RecR;protein_id=MCY7218200.1;transl_table=11 JAKUZA010000057.1 Genbank gene 19749 21794 . - . ID=gene-MK542_08600;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=MK542_08600 JAKUZA010000057.1 Protein Homology CDS 19749 21794 . - 0 ID=cds-MCY7218201.1;Parent=gene-MK542_08600;Dbxref=NCBI_GP:MCY7218201.1;Name=MCY7218201.1;gbkey=CDS;gene=pbp2b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003072012.1;locus_tag=MK542_08600;product=penicillin-binding protein PBP2B;protein_id=MCY7218201.1;transl_table=11 JAKUZA010000057.1 Genbank gene 21958 22650 . - . ID=gene-MK542_08605;Name=MK542_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08605 JAKUZA010000057.1 Protein Homology CDS 21958 22650 . - 0 ID=cds-MCY7218202.1;Parent=gene-MK542_08605;Dbxref=NCBI_GP:MCY7218202.1;Name=MCY7218202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018029419.1;locus_tag=MK542_08605;product=phosphoglycerate mutase;protein_id=MCY7218202.1;transl_table=11 JAKUZA010000057.1 Genbank gene 22831 23283 . - . ID=gene-MK542_08610;Name=MK542_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08610 JAKUZA010000057.1 Protein Homology CDS 22831 23283 . - 0 ID=cds-MCY7218203.1;Parent=gene-MK542_08610;Dbxref=NCBI_GP:MCY7218203.1;Name=MCY7218203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589533.1;locus_tag=MK542_08610;product=transcriptional repressor;protein_id=MCY7218203.1;transl_table=11 ##sequence-region JAKUZA010000058.1 1 11291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000058.1 Genbank region 1 11291 . + . ID=JAKUZA010000058.1:1..11291;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000058.1 Genbank gene 140 622 . - . ID=gene-MK542_08615;Name=MK542_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08615 JAKUZA010000058.1 Protein Homology CDS 140 622 . - 0 ID=cds-MCY7218204.1;Parent=gene-MK542_08615;Dbxref=NCBI_GP:MCY7218204.1;Name=MCY7218204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893508.1;locus_tag=MK542_08615;product=S-ribosylhomocysteine lyase;protein_id=MCY7218204.1;transl_table=11 JAKUZA010000058.1 Genbank gene 902 2515 . + . ID=gene-MK542_08620;Name=MK542_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08620 JAKUZA010000058.1 Protein Homology CDS 902 2515 . + 0 ID=cds-MCY7218205.1;Parent=gene-MK542_08620;Dbxref=NCBI_GP:MCY7218205.1;Name=MCY7218205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520539.1;locus_tag=MK542_08620;product=ribonuclease Y;protein_id=MCY7218205.1;transl_table=11 JAKUZA010000058.1 Genbank gene 2692 3324 . + . ID=gene-MK542_08625;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=MK542_08625 JAKUZA010000058.1 Protein Homology CDS 2692 3324 . + 0 ID=cds-MCY7218206.1;Parent=gene-MK542_08625;Dbxref=NCBI_GP:MCY7218206.1;Name=MCY7218206.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837407.1;locus_tag=MK542_08625;product=guanylate kinase;protein_id=MCY7218206.1;transl_table=11 JAKUZA010000058.1 Genbank gene 3351 3665 . + . ID=gene-MK542_08630;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=MK542_08630 JAKUZA010000058.1 Protein Homology CDS 3351 3665 . + 0 ID=cds-MCY7218207.1;Parent=gene-MK542_08630;Dbxref=NCBI_GP:MCY7218207.1;Name=MCY7218207.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817694.1;locus_tag=MK542_08630;product=DNA-directed RNA polymerase subunit omega;protein_id=MCY7218207.1;transl_table=11 JAKUZA010000058.1 Genbank gene 3731 6136 . + . ID=gene-MK542_08635;Name=MK542_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08635 JAKUZA010000058.1 Protein Homology CDS 3731 6136 . + 0 ID=cds-MCY7218208.1;Parent=gene-MK542_08635;Dbxref=NCBI_GP:MCY7218208.1;Name=MCY7218208.1;Ontology_term=GO:0006260,GO:0032508,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837406.1;locus_tag=MK542_08635;product=primosomal protein N';protein_id=MCY7218208.1;transl_table=11 JAKUZA010000058.1 Genbank gene 6258 7175 . + . ID=gene-MK542_08640;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=MK542_08640 JAKUZA010000058.1 Protein Homology CDS 6258 7175 . + 0 ID=cds-MCY7218209.1;Parent=gene-MK542_08640;Dbxref=NCBI_GP:MCY7218209.1;Name=MCY7218209.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605612.1;locus_tag=MK542_08640;product=methionyl-tRNA formyltransferase;protein_id=MCY7218209.1;transl_table=11 JAKUZA010000058.1 Genbank gene 7165 8478 . + . ID=gene-MK542_08645;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=MK542_08645 JAKUZA010000058.1 Protein Homology CDS 7165 8478 . + 0 ID=cds-MCY7218210.1;Parent=gene-MK542_08645;Dbxref=NCBI_GP:MCY7218210.1;Name=MCY7218210.1;Ontology_term=GO:0001510,GO:0006355,GO:0008168;gbkey=CDS;gene=rsmB;go_function=methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025815.1;locus_tag=MK542_08645;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=MCY7218210.1;transl_table=11 JAKUZA010000058.1 Genbank gene 8500 9240 . + . ID=gene-MK542_08650;Name=MK542_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08650 JAKUZA010000058.1 Protein Homology CDS 8500 9240 . + 0 ID=cds-MCY7218211.1;Parent=gene-MK542_08650;Dbxref=NCBI_GP:MCY7218211.1;Name=MCY7218211.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659003.1;locus_tag=MK542_08650;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=MCY7218211.1;transl_table=11 JAKUZA010000058.1 Genbank gene 9237 11093 . + . ID=gene-MK542_08655;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=MK542_08655 JAKUZA010000058.1 Protein Homology CDS 9237 11093 . + 0 ID=cds-MCY7218212.1;Parent=gene-MK542_08655;Dbxref=NCBI_GP:MCY7218212.1;Name=MCY7218212.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590930.1;locus_tag=MK542_08655;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=MCY7218212.1;transl_table=11 JAKUZA010000058.1 Genbank gene 11160 11291 . - . ID=gene-MK542_08660;Name=MK542_08660;end_range=11291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08660;partial=true JAKUZA010000058.1 Protein Homology CDS 11160 11291 . - 0 ID=cds-MCY7218213.1;Parent=gene-MK542_08660;Dbxref=NCBI_GP:MCY7218213.1;Name=MCY7218213.1;end_range=11291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_08660;partial=true;product=transposase;protein_id=MCY7218213.1;transl_table=11 ##sequence-region JAKUZA010000059.1 1 14326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000059.1 Genbank region 1 14326 . + . ID=JAKUZA010000059.1:1..14326;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000059.1 Genbank gene 1 211 . + . ID=gene-MK542_08665;Name=MK542_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08665;partial=true;start_range=.,1 JAKUZA010000059.1 GeneMarkS-2+ CDS 1 211 . + 1 ID=cds-MCY7218214.1;Parent=gene-MK542_08665;Dbxref=NCBI_GP:MCY7218214.1;Name=MCY7218214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08665;partial=true;product=hypothetical protein;protein_id=MCY7218214.1;start_range=.,1;transl_table=11 JAKUZA010000059.1 Genbank gene 688 1440 . + . ID=gene-MK542_08670;Name=MK542_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08670 JAKUZA010000059.1 Protein Homology CDS 688 1440 . + 0 ID=cds-MCY7218215.1;Parent=gene-MK542_08670;Dbxref=NCBI_GP:MCY7218215.1;Name=MCY7218215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660025.1;locus_tag=MK542_08670;product=DUF6261 family protein;protein_id=MCY7218215.1;transl_table=11 JAKUZA010000059.1 Genbank pseudogene 1648 1914 . + . ID=gene-MK542_08675;Name=MK542_08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_08675;pseudo=true JAKUZA010000059.1 Protein Homology CDS 1648 1914 . + 0 ID=cds-MK542_08675;Parent=gene-MK542_08675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712863.1;locus_tag=MK542_08675;product=cell division protein FtsK;pseudo=true;transl_table=11 JAKUZA010000059.1 Genbank gene 2078 3064 . + . ID=gene-MK542_08680;Name=MK542_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08680 JAKUZA010000059.1 GeneMarkS-2+ CDS 2078 3064 . + 0 ID=cds-MCY7218216.1;Parent=gene-MK542_08680;Dbxref=NCBI_GP:MCY7218216.1;Name=MCY7218216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08680;product=hypothetical protein;protein_id=MCY7218216.1;transl_table=11 JAKUZA010000059.1 Genbank gene 3078 3896 . + . ID=gene-MK542_08685;Name=MK542_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08685 JAKUZA010000059.1 Protein Homology CDS 3078 3896 . + 0 ID=cds-MCY7218217.1;Parent=gene-MK542_08685;Dbxref=NCBI_GP:MCY7218217.1;Name=MCY7218217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357946.1;locus_tag=MK542_08685;product=hypothetical protein;protein_id=MCY7218217.1;transl_table=11 JAKUZA010000059.1 Genbank pseudogene 4066 4434 . + . ID=gene-MK542_08690;Name=MK542_08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_08690;pseudo=true JAKUZA010000059.1 Protein Homology CDS 4066 4434 . + 0 ID=cds-MK542_08690;Parent=gene-MK542_08690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899321.1;locus_tag=MK542_08690;product=cell division protein FtsK;pseudo=true;transl_table=11 JAKUZA010000059.1 Genbank gene 4427 4861 . + . ID=gene-MK542_08695;Name=MK542_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08695 JAKUZA010000059.1 GeneMarkS-2+ CDS 4427 4861 . + 0 ID=cds-MCY7218218.1;Parent=gene-MK542_08695;Dbxref=NCBI_GP:MCY7218218.1;Name=MCY7218218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08695;product=hypothetical protein;protein_id=MCY7218218.1;transl_table=11 JAKUZA010000059.1 Genbank gene 4858 5433 . + . ID=gene-MK542_08700;Name=MK542_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08700 JAKUZA010000059.1 Protein Homology CDS 4858 5433 . + 0 ID=cds-MCY7218219.1;Parent=gene-MK542_08700;Dbxref=NCBI_GP:MCY7218219.1;Name=MCY7218219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913509.1;locus_tag=MK542_08700;product=hypothetical protein;protein_id=MCY7218219.1;transl_table=11 JAKUZA010000059.1 Genbank gene 5687 6574 . + . ID=gene-MK542_08705;Name=MK542_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08705 JAKUZA010000059.1 Protein Homology CDS 5687 6574 . + 0 ID=cds-MCY7218220.1;Parent=gene-MK542_08705;Dbxref=NCBI_GP:MCY7218220.1;Name=MCY7218220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713034.1;locus_tag=MK542_08705;product=NAD glycohydrolase inhibitor;protein_id=MCY7218220.1;transl_table=11 JAKUZA010000059.1 Genbank gene 6903 8063 . + . ID=gene-MK542_08710;Name=MK542_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08710 JAKUZA010000059.1 Protein Homology CDS 6903 8063 . + 0 ID=cds-MCY7218221.1;Parent=gene-MK542_08710;Dbxref=NCBI_GP:MCY7218221.1;Name=MCY7218221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019104.2;locus_tag=MK542_08710;product=hypothetical protein;protein_id=MCY7218221.1;transl_table=11 JAKUZA010000059.1 Genbank gene 8064 8942 . + . ID=gene-MK542_08715;Name=MK542_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08715 JAKUZA010000059.1 Protein Homology CDS 8064 8942 . + 0 ID=cds-MCY7218222.1;Parent=gene-MK542_08715;Dbxref=NCBI_GP:MCY7218222.1;Name=MCY7218222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713034.1;locus_tag=MK542_08715;product=NAD glycohydrolase inhibitor;protein_id=MCY7218222.1;transl_table=11 JAKUZA010000059.1 Genbank gene 9194 10081 . + . ID=gene-MK542_08720;Name=MK542_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08720 JAKUZA010000059.1 Protein Homology CDS 9194 10081 . + 0 ID=cds-MCY7218223.1;Parent=gene-MK542_08720;Dbxref=NCBI_GP:MCY7218223.1;Name=MCY7218223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713034.1;locus_tag=MK542_08720;product=NAD glycohydrolase inhibitor;protein_id=MCY7218223.1;transl_table=11 JAKUZA010000059.1 Genbank gene 10329 10694 . + . ID=gene-MK542_08725;Name=MK542_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08725 JAKUZA010000059.1 GeneMarkS-2+ CDS 10329 10694 . + 0 ID=cds-MCY7218224.1;Parent=gene-MK542_08725;Dbxref=NCBI_GP:MCY7218224.1;Name=MCY7218224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08725;product=hypothetical protein;protein_id=MCY7218224.1;transl_table=11 JAKUZA010000059.1 Genbank gene 11120 11326 . + . ID=gene-MK542_08730;Name=MK542_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08730 JAKUZA010000059.1 Protein Homology CDS 11120 11326 . + 0 ID=cds-MCY7218225.1;Parent=gene-MK542_08730;Dbxref=NCBI_GP:MCY7218225.1;Name=MCY7218225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928364.1;locus_tag=MK542_08730;product=hypothetical protein;protein_id=MCY7218225.1;transl_table=11 JAKUZA010000059.1 Genbank gene 11475 13229 . + . ID=gene-MK542_08735;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=MK542_08735 JAKUZA010000059.1 Protein Homology CDS 11475 13229 . + 0 ID=cds-MCY7218226.1;Parent=gene-MK542_08735;Dbxref=NCBI_GP:MCY7218226.1;Name=MCY7218226.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919922.1;locus_tag=MK542_08735;product=aspartate--tRNA ligase;protein_id=MCY7218226.1;transl_table=11 JAKUZA010000059.1 Genbank gene 13216 14151 . + . ID=gene-MK542_08740;Name=MK542_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08740 JAKUZA010000059.1 Protein Homology CDS 13216 14151 . + 0 ID=cds-MCY7218227.1;Parent=gene-MK542_08740;Dbxref=NCBI_GP:MCY7218227.1;Name=MCY7218227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913944.1;locus_tag=MK542_08740;product=YitT family protein;protein_id=MCY7218227.1;transl_table=11 ##sequence-region JAKUZA010000005.1 1 22720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000005.1 Genbank region 1 22720 . + . ID=JAKUZA010000005.1:1..22720;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000005.1 Genbank gene 72 2051 . - . ID=gene-MK542_00360;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=MK542_00360 JAKUZA010000005.1 Protein Homology CDS 72 2051 . - 0 ID=cds-MCY7216635.1;Parent=gene-MK542_00360;Dbxref=NCBI_GP:MCY7216635.1;Name=MCY7216635.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905700.1;locus_tag=MK542_00360;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MCY7216635.1;transl_table=11 JAKUZA010000005.1 Genbank gene 2069 2611 . - . ID=gene-MK542_00365;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=MK542_00365 JAKUZA010000005.1 Protein Homology CDS 2069 2611 . - 0 ID=cds-MCY7216636.1;Parent=gene-MK542_00365;Dbxref=NCBI_GP:MCY7216636.1;Name=MCY7216636.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604167.1;locus_tag=MK542_00365;product=hypoxanthine phosphoribosyltransferase;protein_id=MCY7216636.1;transl_table=11 JAKUZA010000005.1 Genbank gene 2616 3893 . - . ID=gene-MK542_00370;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=MK542_00370 JAKUZA010000005.1 Protein Homology CDS 2616 3893 . - 0 ID=cds-MCY7216637.1;Parent=gene-MK542_00370;Dbxref=NCBI_GP:MCY7216637.1;Name=MCY7216637.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225057.1;locus_tag=MK542_00370;product=tRNA lysidine(34) synthetase TilS;protein_id=MCY7216637.1;transl_table=11 JAKUZA010000005.1 Genbank gene 3890 5173 . - . ID=gene-MK542_00375;Name=MK542_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00375 JAKUZA010000005.1 Protein Homology CDS 3890 5173 . - 0 ID=cds-MCY7216638.1;Parent=gene-MK542_00375;Dbxref=NCBI_GP:MCY7216638.1;Name=MCY7216638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918029.1;locus_tag=MK542_00375;product=class A beta-lactamase-related serine hydrolase;protein_id=MCY7216638.1;transl_table=11 JAKUZA010000005.1 Genbank gene 5297 5665 . - . ID=gene-MK542_00380;Name=MK542_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00380 JAKUZA010000005.1 Protein Homology CDS 5297 5665 . - 0 ID=cds-MCY7216639.1;Parent=gene-MK542_00380;Dbxref=NCBI_GP:MCY7216639.1;Name=MCY7216639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659562.1;locus_tag=MK542_00380;product=septum formation initiator family protein;protein_id=MCY7216639.1;transl_table=11 JAKUZA010000005.1 Genbank gene 5658 5924 . - . ID=gene-MK542_00385;Name=MK542_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00385 JAKUZA010000005.1 Protein Homology CDS 5658 5924 . - 0 ID=cds-MCY7216640.1;Parent=gene-MK542_00385;Dbxref=NCBI_GP:MCY7216640.1;Name=MCY7216640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371080.1;locus_tag=MK542_00385;product=RNA-binding S4 domain-containing protein;protein_id=MCY7216640.1;transl_table=11 JAKUZA010000005.1 Genbank gene 6015 9518 . - . ID=gene-MK542_00390;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=MK542_00390 JAKUZA010000005.1 Protein Homology CDS 6015 9518 . - 0 ID=cds-MCY7216641.1;Parent=gene-MK542_00390;Dbxref=NCBI_GP:MCY7216641.1;Name=MCY7216641.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659526.1;locus_tag=MK542_00390;product=transcription-repair coupling factor;protein_id=MCY7216641.1;transl_table=11 JAKUZA010000005.1 Genbank gene 9511 10080 . - . ID=gene-MK542_00395;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=MK542_00395 JAKUZA010000005.1 Protein Homology CDS 9511 10080 . - 0 ID=cds-MCY7216642.1;Parent=gene-MK542_00395;Dbxref=NCBI_GP:MCY7216642.1;Name=MCY7216642.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836278.1;locus_tag=MK542_00395;product=aminoacyl-tRNA hydrolase;protein_id=MCY7216642.1;transl_table=11 JAKUZA010000005.1 Genbank gene 10153 11268 . - . ID=gene-MK542_00400;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=MK542_00400 JAKUZA010000005.1 Protein Homology CDS 10153 11268 . - 0 ID=cds-MCY7216643.1;Parent=gene-MK542_00400;Dbxref=NCBI_GP:MCY7216643.1;Name=MCY7216643.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=MK542_00400;product=redox-regulated ATPase YchF;protein_id=MCY7216643.1;transl_table=11 JAKUZA010000005.1 Genbank gene 11471 11665 . - . ID=gene-MK542_00405;Name=MK542_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00405 JAKUZA010000005.1 Protein Homology CDS 11471 11665 . - 0 ID=cds-MCY7216644.1;Parent=gene-MK542_00405;Dbxref=NCBI_GP:MCY7216644.1;Name=MCY7216644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397288.1;locus_tag=MK542_00405;product=DUF951 family protein;protein_id=MCY7216644.1;transl_table=11 JAKUZA010000005.1 Genbank gene 11838 12974 . - . ID=gene-MK542_00410;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=MK542_00410 JAKUZA010000005.1 Protein Homology CDS 11838 12974 . - 0 ID=cds-MCY7216645.1;Parent=gene-MK542_00410;Dbxref=NCBI_GP:MCY7216645.1;Name=MCY7216645.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581170.1;locus_tag=MK542_00410;product=DNA polymerase III subunit beta;protein_id=MCY7216645.1;transl_table=11 JAKUZA010000005.1 Genbank gene 13132 14487 . - . ID=gene-MK542_00415;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=MK542_00415 JAKUZA010000005.1 Protein Homology CDS 13132 14487 . - 0 ID=cds-MCY7216646.1;Parent=gene-MK542_00415;Dbxref=NCBI_GP:MCY7216646.1;Name=MCY7216646.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922822.1;locus_tag=MK542_00415;product=chromosomal replication initiator protein DnaA;protein_id=MCY7216646.1;transl_table=11 JAKUZA010000005.1 Genbank gene 14700 15461 . - . ID=gene-MK542_00420;Name=MK542_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00420 JAKUZA010000005.1 Protein Homology CDS 14700 15461 . - 0 ID=cds-MCY7216647.1;Parent=gene-MK542_00420;Dbxref=NCBI_GP:MCY7216647.1;Name=MCY7216647.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659547.1;locus_tag=MK542_00420;product=ParB/RepB/Spo0J family partition protein;protein_id=MCY7216647.1;transl_table=11 JAKUZA010000005.1 Genbank gene 15525 16703 . - . ID=gene-MK542_00425;Name=MK542_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00425 JAKUZA010000005.1 Protein Homology CDS 15525 16703 . - 0 ID=cds-MCY7216648.1;Parent=gene-MK542_00425;Dbxref=NCBI_GP:MCY7216648.1;Name=MCY7216648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922824.1;locus_tag=MK542_00425;product=trypsin-like peptidase domain-containing protein;protein_id=MCY7216648.1;transl_table=11 JAKUZA010000005.1 Genbank gene 16907 17386 . + . ID=gene-MK542_00430;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=MK542_00430 JAKUZA010000005.1 Protein Homology CDS 16907 17386 . + 0 ID=cds-MCY7216649.1;Parent=gene-MK542_00430;Dbxref=NCBI_GP:MCY7216649.1;Name=MCY7216649.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131080.1;locus_tag=MK542_00430;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=MCY7216649.1;transl_table=11 JAKUZA010000005.1 Genbank gene 17430 17503 . + . ID=gene-MK542_00435;Name=MK542_00435;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00435 JAKUZA010000005.1 tRNAscan-SE tRNA 17430 17503 . + . ID=rna-MK542_00435;Parent=gene-MK542_00435;anticodon=(pos:17464..17466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00435;product=tRNA-Arg JAKUZA010000005.1 tRNAscan-SE exon 17430 17503 . + . ID=exon-MK542_00435-1;Parent=rna-MK542_00435;anticodon=(pos:17464..17466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00435;product=tRNA-Arg JAKUZA010000005.1 Genbank gene 17683 17817 . + . ID=gene-MK542_00440;Name=MK542_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00440 JAKUZA010000005.1 Protein Homology CDS 17683 17817 . + 0 ID=cds-MCY7216650.1;Parent=gene-MK542_00440;Dbxref=NCBI_GP:MCY7216650.1;Name=MCY7216650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029519.1;locus_tag=MK542_00440;product=bacteriocin;protein_id=MCY7216650.1;transl_table=11 JAKUZA010000005.1 Genbank gene 17857 19203 . + . ID=gene-MK542_00445;Name=MK542_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00445 JAKUZA010000005.1 Protein Homology CDS 17857 19203 . + 0 ID=cds-MCY7216651.1;Parent=gene-MK542_00445;Dbxref=NCBI_GP:MCY7216651.1;Name=MCY7216651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591383.1;locus_tag=MK542_00445;product=ATP-binding protein;protein_id=MCY7216651.1;transl_table=11 JAKUZA010000005.1 Genbank gene 19200 19955 . + . ID=gene-MK542_00450;Name=comE;gbkey=Gene;gene=comE;gene_biotype=protein_coding;locus_tag=MK542_00450 JAKUZA010000005.1 Protein Homology CDS 19200 19955 . + 0 ID=cds-MCY7216652.1;Parent=gene-MK542_00450;Dbxref=NCBI_GP:MCY7216652.1;Name=MCY7216652.1;gbkey=CDS;gene=comE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866065.1;locus_tag=MK542_00450;product=competence system response regulator transcription factor ComE;protein_id=MCY7216652.1;transl_table=11 JAKUZA010000005.1 Genbank gene 20008 20079 . + . ID=gene-MK542_00455;Name=MK542_00455;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00455 JAKUZA010000005.1 tRNAscan-SE tRNA 20008 20079 . + . ID=rna-MK542_00455;Parent=gene-MK542_00455;anticodon=(pos:20041..20043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00455;product=tRNA-Glu JAKUZA010000005.1 tRNAscan-SE exon 20008 20079 . + . ID=exon-MK542_00455-1;Parent=rna-MK542_00455;anticodon=(pos:20041..20043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00455;product=tRNA-Glu JAKUZA010000005.1 Genbank gene 20085 20158 . + . ID=gene-MK542_00460;Name=MK542_00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_00460 JAKUZA010000005.1 tRNAscan-SE tRNA 20085 20158 . + . ID=rna-MK542_00460;Parent=gene-MK542_00460;anticodon=(pos:20119..20121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00460;product=tRNA-Asn JAKUZA010000005.1 tRNAscan-SE exon 20085 20158 . + . ID=exon-MK542_00460-1;Parent=rna-MK542_00460;anticodon=(pos:20119..20121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_00460;product=tRNA-Asn JAKUZA010000005.1 Genbank pseudogene 20305 21421 . + . ID=gene-MK542_00465;Name=MK542_00465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00465;pseudo=true JAKUZA010000005.1 Protein Homology CDS 20305 21421 . + 0 ID=cds-MK542_00465;Parent=gene-MK542_00465;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611513.1;locus_tag=MK542_00465;product=IS3 family transposase;pseudo=true;transl_table=11 JAKUZA010000005.1 Genbank gene 21565 22548 . + . ID=gene-MK542_00470;Name=MK542_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00470 JAKUZA010000005.1 Protein Homology CDS 21565 22548 . + 0 ID=cds-MCY7216653.1;Parent=gene-MK542_00470;Dbxref=NCBI_GP:MCY7216653.1;Name=MCY7216653.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886406.1;locus_tag=MK542_00470;product=IS30 family transposase;protein_id=MCY7216653.1;transl_table=11 ##sequence-region JAKUZA010000060.1 1 14595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000060.1 Genbank region 1 14595 . + . ID=JAKUZA010000060.1:1..14595;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000060.1 Genbank gene 38 1585 . - . ID=gene-MK542_08745;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=MK542_08745 JAKUZA010000060.1 Protein Homology CDS 38 1585 . - 0 ID=cds-MCY7218228.1;Parent=gene-MK542_08745;Dbxref=NCBI_GP:MCY7218228.1;Name=MCY7218228.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=MK542_08745;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=MCY7218228.1;transl_table=11 JAKUZA010000060.1 Genbank gene 1610 2119 . - . ID=gene-MK542_08750;Name=MK542_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08750 JAKUZA010000060.1 Protein Homology CDS 1610 2119 . - 0 ID=cds-MCY7218229.1;Parent=gene-MK542_08750;Dbxref=NCBI_GP:MCY7218229.1;Name=MCY7218229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000894002.1;locus_tag=MK542_08750;product=VanZ family protein;protein_id=MCY7218229.1;transl_table=11 JAKUZA010000060.1 Genbank gene 2206 2751 . - . ID=gene-MK542_08755;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=MK542_08755 JAKUZA010000060.1 Protein Homology CDS 2206 2751 . - 0 ID=cds-MCY7218230.1;Parent=gene-MK542_08755;Dbxref=NCBI_GP:MCY7218230.1;Name=MCY7218230.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717508.1;locus_tag=MK542_08755;product=phosphoribosylglycinamide formyltransferase;protein_id=MCY7218230.1;transl_table=11 JAKUZA010000060.1 Genbank gene 2748 3767 . - . ID=gene-MK542_08760;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=MK542_08760 JAKUZA010000060.1 Protein Homology CDS 2748 3767 . - 0 ID=cds-MCY7218231.1;Parent=gene-MK542_08760;Dbxref=NCBI_GP:MCY7218231.1;Name=MCY7218231.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729529.1;locus_tag=MK542_08760;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=MCY7218231.1;transl_table=11 JAKUZA010000060.1 Genbank gene 3824 5263 . - . ID=gene-MK542_08765;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=MK542_08765 JAKUZA010000060.1 Protein Homology CDS 3824 5263 . - 0 ID=cds-MCY7218232.1;Parent=gene-MK542_08765;Dbxref=NCBI_GP:MCY7218232.1;Name=MCY7218232.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263130.1;locus_tag=MK542_08765;product=amidophosphoribosyltransferase;protein_id=MCY7218232.1;transl_table=11 JAKUZA010000060.1 Genbank gene 5432 9157 . - . ID=gene-MK542_08770;Name=MK542_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08770 JAKUZA010000060.1 Protein Homology CDS 5432 9157 . - 0 ID=cds-MCY7218233.1;Parent=gene-MK542_08770;Dbxref=NCBI_GP:MCY7218233.1;Name=MCY7218233.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361233.1;locus_tag=MK542_08770;product=phosphoribosylformylglycinamidine synthase;protein_id=MCY7218233.1;transl_table=11 JAKUZA010000060.1 Genbank gene 9177 9884 . - . ID=gene-MK542_08775;Name=MK542_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08775 JAKUZA010000060.1 Protein Homology CDS 9177 9884 . - 0 ID=cds-MCY7218234.1;Parent=gene-MK542_08775;Dbxref=NCBI_GP:MCY7218234.1;Name=MCY7218234.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192684.1;locus_tag=MK542_08775;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MCY7218234.1;transl_table=11 JAKUZA010000060.1 Genbank gene 10111 10353 . - . ID=gene-MK542_08780;Name=MK542_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08780 JAKUZA010000060.1 Protein Homology CDS 10111 10353 . - 0 ID=cds-MCY7218235.1;Parent=gene-MK542_08780;Dbxref=NCBI_GP:MCY7218235.1;Name=MCY7218235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591354.1;locus_tag=MK542_08780;product=acyl carrier protein;protein_id=MCY7218235.1;transl_table=11 JAKUZA010000060.1 Genbank gene 10350 11354 . - . ID=gene-MK542_08785;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=MK542_08785 JAKUZA010000060.1 Protein Homology CDS 10350 11354 . - 0 ID=cds-MCY7218236.1;Parent=gene-MK542_08785;Dbxref=NCBI_GP:MCY7218236.1;Name=MCY7218236.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591355.1;locus_tag=MK542_08785;product=phosphate acyltransferase PlsX;protein_id=MCY7218236.1;transl_table=11 JAKUZA010000060.1 Genbank gene 11335 12132 . - . ID=gene-MK542_08790;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=MK542_08790 JAKUZA010000060.1 Protein Homology CDS 11335 12132 . - 0 ID=cds-MCY7218237.1;Parent=gene-MK542_08790;Dbxref=NCBI_GP:MCY7218237.1;Name=MCY7218237.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604175.1;locus_tag=MK542_08790;product=DNA repair protein RecO;protein_id=MCY7218237.1;transl_table=11 JAKUZA010000060.1 Genbank gene 12125 13297 . - . ID=gene-MK542_08795;Name=MK542_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08795 JAKUZA010000060.1 Protein Homology CDS 12125 13297 . - 0 ID=cds-MCY7218238.1;Parent=gene-MK542_08795;Dbxref=NCBI_GP:MCY7218238.1;Name=MCY7218238.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660152.1;locus_tag=MK542_08795;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MCY7218238.1;transl_table=11 JAKUZA010000060.1 Genbank gene 13432 14397 . - . ID=gene-MK542_08800;Name=MK542_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08800 JAKUZA010000060.1 Protein Homology CDS 13432 14397 . - 0 ID=cds-MCY7218239.1;Parent=gene-MK542_08800;Dbxref=NCBI_GP:MCY7218239.1;Name=MCY7218239.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192689.1;locus_tag=MK542_08800;product=ribose-phosphate diphosphokinase;protein_id=MCY7218239.1;transl_table=11 JAKUZA010000060.1 Genbank gene 14384 14595 . - . ID=gene-MK542_08805;Name=MK542_08805;end_range=14595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08805;partial=true JAKUZA010000060.1 GeneMarkS-2+ CDS 14384 14595 . - 2 ID=cds-MCY7218240.1;Parent=gene-MK542_08805;Dbxref=NCBI_GP:MCY7218240.1;Name=MCY7218240.1;end_range=14595,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08805;partial=true;product=hypothetical protein;protein_id=MCY7218240.1;transl_table=11 ##sequence-region JAKUZA010000061.1 1 12864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000061.1 Genbank region 1 12864 . + . ID=JAKUZA010000061.1:1..12864;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000061.1 Genbank gene 1 126 . + . ID=gene-MK542_08810;Name=MK542_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08810;partial=true;start_range=.,1 JAKUZA010000061.1 Protein Homology CDS 1 126 . + 0 ID=cds-MCY7218241.1;Parent=gene-MK542_08810;Dbxref=NCBI_GP:MCY7218241.1;Name=MCY7218241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008534445.1;locus_tag=MK542_08810;partial=true;product=transposase;protein_id=MCY7218241.1;start_range=.,1;transl_table=11 JAKUZA010000061.1 Genbank gene 202 1257 . - . ID=gene-MK542_08815;Name=MK542_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08815 JAKUZA010000061.1 Protein Homology CDS 202 1257 . - 0 ID=cds-MCY7218242.1;Parent=gene-MK542_08815;Dbxref=NCBI_GP:MCY7218242.1;Name=MCY7218242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605475.1;locus_tag=MK542_08815;product=class A beta-lactamase-related serine hydrolase;protein_id=MCY7218242.1;transl_table=11 JAKUZA010000061.1 Genbank gene 1403 2008 . - . ID=gene-MK542_08820;Name=MK542_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08820 JAKUZA010000061.1 Protein Homology CDS 1403 2008 . - 0 ID=cds-MCY7218243.1;Parent=gene-MK542_08820;Dbxref=NCBI_GP:MCY7218243.1;Name=MCY7218243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519814.1;locus_tag=MK542_08820;product=superoxide dismutase;protein_id=MCY7218243.1;transl_table=11 JAKUZA010000061.1 Genbank gene 2100 3137 . - . ID=gene-MK542_08825;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=MK542_08825 JAKUZA010000061.1 Protein Homology CDS 2100 3137 . - 0 ID=cds-MCY7218244.1;Parent=gene-MK542_08825;Dbxref=NCBI_GP:MCY7218244.1;Name=MCY7218244.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590772.1;locus_tag=MK542_08825;product=DNA polymerase III subunit delta;protein_id=MCY7218244.1;transl_table=11 JAKUZA010000061.1 Genbank gene 3472 4458 . - . ID=gene-MK542_08830;Name=MK542_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08830 JAKUZA010000061.1 Protein Homology CDS 3472 4458 . - 0 ID=cds-MCY7218245.1;Parent=gene-MK542_08830;Dbxref=NCBI_GP:MCY7218245.1;Name=MCY7218245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191883.1;locus_tag=MK542_08830;product=DUF805 domain-containing protein;protein_id=MCY7218245.1;transl_table=11 JAKUZA010000061.1 Genbank gene 4632 5444 . - . ID=gene-MK542_08835;Name=MK542_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08835 JAKUZA010000061.1 GeneMarkS-2+ CDS 4632 5444 . - 0 ID=cds-MCY7218246.1;Parent=gene-MK542_08835;Dbxref=NCBI_GP:MCY7218246.1;Name=MCY7218246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_08835;product=hypothetical protein;protein_id=MCY7218246.1;transl_table=11 JAKUZA010000061.1 Genbank gene 5761 8001 . - . ID=gene-MK542_08840;Name=MK542_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08840 JAKUZA010000061.1 Protein Homology CDS 5761 8001 . - 0 ID=cds-MCY7218247.1;Parent=gene-MK542_08840;Dbxref=NCBI_GP:MCY7218247.1;Name=MCY7218247.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904090.1;locus_tag=MK542_08840;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=MCY7218247.1;transl_table=11 JAKUZA010000061.1 Genbank gene 7982 8677 . - . ID=gene-MK542_08845;Name=MK542_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08845 JAKUZA010000061.1 Protein Homology CDS 7982 8677 . - 0 ID=cds-MCY7218248.1;Parent=gene-MK542_08845;Dbxref=NCBI_GP:MCY7218248.1;Name=MCY7218248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590661.1;locus_tag=MK542_08845;product=helix-hairpin-helix domain-containing protein;protein_id=MCY7218248.1;transl_table=11 JAKUZA010000061.1 Genbank gene 8825 9373 . - . ID=gene-MK542_08850;Name=MK542_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08850 JAKUZA010000061.1 Protein Homology CDS 8825 9373 . - 0 ID=cds-MCY7218249.1;Parent=gene-MK542_08850;Dbxref=NCBI_GP:MCY7218249.1;Name=MCY7218249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904088.1;locus_tag=MK542_08850;product=HXXEE domain-containing protein;protein_id=MCY7218249.1;transl_table=11 JAKUZA010000061.1 Genbank gene 9446 10186 . - . ID=gene-MK542_08855;Name=MK542_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08855 JAKUZA010000061.1 Protein Homology CDS 9446 10186 . - 0 ID=cds-MCY7218250.1;Parent=gene-MK542_08855;Dbxref=NCBI_GP:MCY7218250.1;Name=MCY7218250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897977.1;locus_tag=MK542_08855;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=MCY7218250.1;transl_table=11 JAKUZA010000061.1 Genbank gene 10344 12683 . + . ID=gene-MK542_08860;Name=MK542_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08860 JAKUZA010000061.1 Protein Homology CDS 10344 12683 . + 0 ID=cds-MCY7218251.1;Parent=gene-MK542_08860;Dbxref=NCBI_GP:MCY7218251.1;Name=MCY7218251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897978.1;locus_tag=MK542_08860;product=cation-translocating P-type ATPase;protein_id=MCY7218251.1;transl_table=11 ##sequence-region JAKUZA010000062.1 1 19427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000062.1 Genbank region 1 19427 . + . ID=JAKUZA010000062.1:1..19427;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000062.1 Genbank gene 181 383 . + . ID=gene-MK542_08865;Name=tnpA;end_range=383,.;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=MK542_08865;partial=true JAKUZA010000062.1 Protein Homology CDS 181 383 . + 0 ID=cds-MCY7218252.1;Parent=gene-MK542_08865;Dbxref=NCBI_GP:MCY7218252.1;Name=MCY7218252.1;Ontology_term=GO:0004803;end_range=383,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148688.1;locus_tag=MK542_08865;partial=true;product=IS200/IS605 family transposase;protein_id=MCY7218252.1;transl_table=11 JAKUZA010000062.1 Genbank gene 1229 2071 . + . ID=gene-MK542_08870;Name=MK542_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08870 JAKUZA010000062.1 Protein Homology CDS 1229 2071 . + 0 ID=cds-MCY7218253.1;Parent=gene-MK542_08870;Dbxref=NCBI_GP:MCY7218253.1;Name=MCY7218253.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754698.1;locus_tag=MK542_08870;product=NAD(P)H-hydrate dehydratase;protein_id=MCY7218253.1;transl_table=11 JAKUZA010000062.1 Genbank gene 2243 3583 . + . ID=gene-MK542_08875;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=MK542_08875 JAKUZA010000062.1 Protein Homology CDS 2243 3583 . + 0 ID=cds-MCY7218254.1;Parent=gene-MK542_08875;Dbxref=NCBI_GP:MCY7218254.1;Name=MCY7218254.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000165.1;locus_tag=MK542_08875;product=exodeoxyribonuclease VII large subunit;protein_id=MCY7218254.1;transl_table=11 JAKUZA010000062.1 Genbank gene 3561 3773 . + . ID=gene-MK542_08880;Name=MK542_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08880 JAKUZA010000062.1 Protein Homology CDS 3561 3773 . + 0 ID=cds-MCY7218255.1;Parent=gene-MK542_08880;Dbxref=NCBI_GP:MCY7218255.1;Name=MCY7218255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809086.1;locus_tag=MK542_08880;product=exodeoxyribonuclease VII small subunit;protein_id=MCY7218255.1;transl_table=11 JAKUZA010000062.1 Genbank gene 3770 4645 . + . ID=gene-MK542_08885;Name=MK542_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08885 JAKUZA010000062.1 Protein Homology CDS 3770 4645 . + 0 ID=cds-MCY7218256.1;Parent=gene-MK542_08885;Dbxref=NCBI_GP:MCY7218256.1;Name=MCY7218256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743807.1;locus_tag=MK542_08885;product=polyprenyl synthetase family protein;protein_id=MCY7218256.1;transl_table=11 JAKUZA010000062.1 Genbank gene 4638 5462 . + . ID=gene-MK542_08890;Name=MK542_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08890 JAKUZA010000062.1 Protein Homology CDS 4638 5462 . + 0 ID=cds-MCY7218257.1;Parent=gene-MK542_08890;Dbxref=NCBI_GP:MCY7218257.1;Name=MCY7218257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605172.1;locus_tag=MK542_08890;product=TlyA family RNA methyltransferase;protein_id=MCY7218257.1;transl_table=11 JAKUZA010000062.1 Genbank gene 5446 5877 . + . ID=gene-MK542_08895;Name=MK542_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08895 JAKUZA010000062.1 Protein Homology CDS 5446 5877 . + 0 ID=cds-MCY7218258.1;Parent=gene-MK542_08895;Dbxref=NCBI_GP:MCY7218258.1;Name=MCY7218258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034407.1;locus_tag=MK542_08895;product=arginine repressor;protein_id=MCY7218258.1;transl_table=11 JAKUZA010000062.1 Genbank gene 5886 7544 . + . ID=gene-MK542_08900;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=MK542_08900 JAKUZA010000062.1 Protein Homology CDS 5886 7544 . + 0 ID=cds-MCY7218259.1;Parent=gene-MK542_08900;Dbxref=NCBI_GP:MCY7218259.1;Name=MCY7218259.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896130.1;locus_tag=MK542_08900;product=DNA repair protein RecN;protein_id=MCY7218259.1;transl_table=11 JAKUZA010000062.1 Genbank gene 7597 8325 . + . ID=gene-MK542_08905;Name=MK542_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08905 JAKUZA010000062.1 Protein Homology CDS 7597 8325 . + 0 ID=cds-MCY7218260.1;Parent=gene-MK542_08905;Dbxref=NCBI_GP:MCY7218260.1;Name=MCY7218260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896128.1;locus_tag=MK542_08905;product=serine/threonine protein phosphatase;protein_id=MCY7218260.1;transl_table=11 JAKUZA010000062.1 Genbank gene 8646 9488 . - . ID=gene-MK542_08910;Name=MK542_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08910 JAKUZA010000062.1 Protein Homology CDS 8646 9488 . - 0 ID=cds-MCY7218261.1;Parent=gene-MK542_08910;Dbxref=NCBI_GP:MCY7218261.1;Name=MCY7218261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590689.1;locus_tag=MK542_08910;product=glycoside hydrolase family 25 protein;protein_id=MCY7218261.1;transl_table=11 JAKUZA010000062.1 Genbank gene 9709 10923 . + . ID=gene-MK542_08915;Name=MK542_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08915 JAKUZA010000062.1 Protein Homology CDS 9709 10923 . + 0 ID=cds-MCY7218262.1;Parent=gene-MK542_08915;Dbxref=NCBI_GP:MCY7218262.1;Name=MCY7218262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809024.1;locus_tag=MK542_08915;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MCY7218262.1;transl_table=11 JAKUZA010000062.1 Genbank gene 10992 13838 . + . ID=gene-MK542_08920;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=MK542_08920 JAKUZA010000062.1 Protein Homology CDS 10992 13838 . + 0 ID=cds-MCY7218263.1;Parent=gene-MK542_08920;Dbxref=NCBI_GP:MCY7218263.1;Name=MCY7218263.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605421.1;locus_tag=MK542_08920;product=phosphoenolpyruvate carboxylase;protein_id=MCY7218263.1;transl_table=11 JAKUZA010000062.1 Genbank gene 14001 14471 . + . ID=gene-MK542_08925;Name=MK542_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08925 JAKUZA010000062.1 Protein Homology CDS 14001 14471 . + 0 ID=cds-MCY7218264.1;Parent=gene-MK542_08925;Dbxref=NCBI_GP:MCY7218264.1;Name=MCY7218264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899982.1;locus_tag=MK542_08925;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCY7218264.1;transl_table=11 JAKUZA010000062.1 Genbank gene 14458 15456 . + . ID=gene-MK542_08930;Name=MK542_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08930 JAKUZA010000062.1 Protein Homology CDS 14458 15456 . + 0 ID=cds-MCY7218265.1;Parent=gene-MK542_08930;Dbxref=NCBI_GP:MCY7218265.1;Name=MCY7218265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897241.1;locus_tag=MK542_08930;product=anti-sigma factor;protein_id=MCY7218265.1;transl_table=11 JAKUZA010000062.1 Genbank gene 15579 16775 . + . ID=gene-MK542_08935;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=MK542_08935 JAKUZA010000062.1 Protein Homology CDS 15579 16775 . + 0 ID=cds-MCY7218266.1;Parent=gene-MK542_08935;Dbxref=NCBI_GP:MCY7218266.1;Name=MCY7218266.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=MK542_08935;product=elongation factor Tu;protein_id=MCY7218266.1;transl_table=11 JAKUZA010000062.1 Genbank gene 17054 17812 . + . ID=gene-MK542_08940;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=MK542_08940 JAKUZA010000062.1 Protein Homology CDS 17054 17812 . + 0 ID=cds-MCY7218267.1;Parent=gene-MK542_08940;Dbxref=NCBI_GP:MCY7218267.1;Name=MCY7218267.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087908.1;locus_tag=MK542_08940;product=triose-phosphate isomerase;protein_id=MCY7218267.1;transl_table=11 JAKUZA010000062.1 Genbank gene 17887 19427 . + . ID=gene-MK542_08945;Name=MK542_08945;end_range=19427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08945;partial=true JAKUZA010000062.1 Protein Homology CDS 17887 19427 . + 0 ID=cds-MCY7218268.1;Parent=gene-MK542_08945;Dbxref=NCBI_GP:MCY7218268.1;Name=MCY7218268.1;end_range=19427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589687.1;locus_tag=MK542_08945;partial=true;product=GBS Bsp-like repeat-containing protein;protein_id=MCY7218268.1;transl_table=11 ##sequence-region JAKUZA010000063.1 1 18026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000063.1 Genbank region 1 18026 . + . ID=JAKUZA010000063.1:1..18026;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000063.1 Genbank gene 1 964 . - . ID=gene-MK542_08950;Name=MK542_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08950;partial=true;start_range=.,1 JAKUZA010000063.1 Protein Homology CDS 1 964 . - 0 ID=cds-MCY7218269.1;Parent=gene-MK542_08950;Dbxref=NCBI_GP:MCY7218269.1;Name=MCY7218269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816351.1;locus_tag=MK542_08950;partial=true;product=hypothetical protein;protein_id=MCY7218269.1;start_range=.,1;transl_table=11 JAKUZA010000063.1 Genbank gene 961 3117 . - . ID=gene-MK542_08955;Name=MK542_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08955 JAKUZA010000063.1 Protein Homology CDS 961 3117 . - 0 ID=cds-MCY7218270.1;Parent=gene-MK542_08955;Dbxref=NCBI_GP:MCY7218270.1;Name=MCY7218270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279978.1;locus_tag=MK542_08955;product=hypothetical protein;protein_id=MCY7218270.1;transl_table=11 JAKUZA010000063.1 Genbank gene 3121 3489 . - . ID=gene-MK542_08960;Name=MK542_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08960 JAKUZA010000063.1 Protein Homology CDS 3121 3489 . - 0 ID=cds-MCY7218271.1;Parent=gene-MK542_08960;Dbxref=NCBI_GP:MCY7218271.1;Name=MCY7218271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513720.1;locus_tag=MK542_08960;product=DUF5082 domain-containing protein;protein_id=MCY7218271.1;transl_table=11 JAKUZA010000063.1 Genbank gene 3504 7913 . - . ID=gene-MK542_08965;Name=essC;gbkey=Gene;gene=essC;gene_biotype=protein_coding;locus_tag=MK542_08965 JAKUZA010000063.1 Protein Homology CDS 3504 7913 . - 0 ID=cds-MCY7218272.1;Parent=gene-MK542_08965;Dbxref=NCBI_GP:MCY7218272.1;Name=MCY7218272.1;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essC;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744027.1;locus_tag=MK542_08965;product=type VII secretion protein EssC;protein_id=MCY7218272.1;transl_table=11 JAKUZA010000063.1 Genbank gene 7937 9187 . - . ID=gene-MK542_08970;Name=essB;gbkey=Gene;gene=essB;gene_biotype=protein_coding;locus_tag=MK542_08970 JAKUZA010000063.1 Protein Homology CDS 7937 9187 . - 0 ID=cds-MCY7218273.1;Parent=gene-MK542_08970;Dbxref=NCBI_GP:MCY7218273.1;Name=MCY7218273.1;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essB;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796944.1;locus_tag=MK542_08970;product=type VII secretion protein EssB;protein_id=MCY7218273.1;transl_table=11 JAKUZA010000063.1 Genbank gene 9180 9428 . - . ID=gene-MK542_08975;Name=MK542_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08975 JAKUZA010000063.1 Protein Homology CDS 9180 9428 . - 0 ID=cds-MCY7218274.1;Parent=gene-MK542_08975;Dbxref=NCBI_GP:MCY7218274.1;Name=MCY7218274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999611.1;locus_tag=MK542_08975;product=EsaB/YukD family protein;protein_id=MCY7218274.1;transl_table=11 JAKUZA010000063.1 Genbank gene 9519 9983 . - . ID=gene-MK542_08980;Name=essA;gbkey=Gene;gene=essA;gene_biotype=protein_coding;locus_tag=MK542_08980 JAKUZA010000063.1 Protein Homology CDS 9519 9983 . - 0 ID=cds-MCY7218275.1;Parent=gene-MK542_08980;Dbxref=NCBI_GP:MCY7218275.1;Name=MCY7218275.1;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essA;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659201.1;locus_tag=MK542_08980;product=type VII secretion protein EssA;protein_id=MCY7218275.1;transl_table=11 JAKUZA010000063.1 Genbank gene 9996 12998 . - . ID=gene-MK542_08985;Name=esaA;gbkey=Gene;gene=esaA;gene_biotype=protein_coding;locus_tag=MK542_08985 JAKUZA010000063.1 Protein Homology CDS 9996 12998 . - 0 ID=cds-MCY7218276.1;Parent=gene-MK542_08985;Dbxref=NCBI_GP:MCY7218276.1;Name=MCY7218276.1;Ontology_term=GO:0016021;gbkey=CDS;gene=esaA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899623.1;locus_tag=MK542_08985;product=type VII secretion protein EsaA;protein_id=MCY7218276.1;transl_table=11 JAKUZA010000063.1 Genbank gene 13078 13365 . - . ID=gene-MK542_08990;Name=MK542_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_08990 JAKUZA010000063.1 Protein Homology CDS 13078 13365 . - 0 ID=cds-MCY7218277.1;Parent=gene-MK542_08990;Dbxref=NCBI_GP:MCY7218277.1;Name=MCY7218277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928406.1;locus_tag=MK542_08990;product=WXG100 family type VII secretion target;protein_id=MCY7218277.1;transl_table=11 JAKUZA010000063.1 Genbank gene 13563 14843 . - . ID=gene-MK542_08995;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=MK542_08995 JAKUZA010000063.1 Protein Homology CDS 13563 14843 . - 0 ID=cds-MCY7218278.1;Parent=gene-MK542_08995;Dbxref=NCBI_GP:MCY7218278.1;Name=MCY7218278.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837670.1;locus_tag=MK542_08995;product=histidine--tRNA ligase;protein_id=MCY7218278.1;transl_table=11 JAKUZA010000063.1 Genbank gene 15024 15365 . + . ID=gene-MK542_09000;Name=MK542_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09000 JAKUZA010000063.1 Protein Homology CDS 15024 15365 . + 0 ID=cds-MCY7218279.1;Parent=gene-MK542_09000;Dbxref=NCBI_GP:MCY7218279.1;Name=MCY7218279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003080443.1;locus_tag=MK542_09000;product=metal-sulfur cluster assembly factor;protein_id=MCY7218279.1;transl_table=11 JAKUZA010000063.1 Genbank gene 15485 17191 . - . ID=gene-MK542_09005;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=MK542_09005 JAKUZA010000063.1 Protein Homology CDS 15485 17191 . - 0 ID=cds-MCY7218280.1;Parent=gene-MK542_09005;Dbxref=NCBI_GP:MCY7218280.1;Name=MCY7218280.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137341.1;locus_tag=MK542_09005;product=dihydroxy-acid dehydratase;protein_id=MCY7218280.1;transl_table=11 JAKUZA010000063.1 Genbank gene 17482 17664 . + . ID=gene-MK542_09010;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=MK542_09010 JAKUZA010000063.1 Protein Homology CDS 17482 17664 . + 0 ID=cds-MCY7218281.1;Parent=gene-MK542_09010;Dbxref=NCBI_GP:MCY7218281.1;Name=MCY7218281.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=MK542_09010;product=50S ribosomal protein L32;protein_id=MCY7218281.1;transl_table=11 JAKUZA010000063.1 Genbank gene 17680 17829 . + . ID=gene-MK542_09015;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=MK542_09015 JAKUZA010000063.1 Protein Homology CDS 17680 17829 . + 0 ID=cds-MCY7218282.1;Parent=gene-MK542_09015;Dbxref=NCBI_GP:MCY7218282.1;Name=MCY7218282.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=MK542_09015;product=50S ribosomal protein L33;protein_id=MCY7218282.1;transl_table=11 ##sequence-region JAKUZA010000064.1 1 33417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000064.1 Genbank region 1 33417 . + . ID=JAKUZA010000064.1:1..33417;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000064.1 Genbank gene 1 158 . + . ID=gene-MK542_09020;Name=MK542_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09020;partial=true;start_range=.,1 JAKUZA010000064.1 Protein Homology CDS 1 158 . + 2 ID=cds-MCY7218283.1;Parent=gene-MK542_09020;Dbxref=NCBI_GP:MCY7218283.1;Name=MCY7218283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_09020;partial=true;product=IS481 family transposase;protein_id=MCY7218283.1;start_range=.,1;transl_table=11 JAKUZA010000064.1 Genbank gene 295 1191 . - . ID=gene-MK542_09025;Name=MK542_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09025 JAKUZA010000064.1 Protein Homology CDS 295 1191 . - 0 ID=cds-MCY7218284.1;Parent=gene-MK542_09025;Dbxref=NCBI_GP:MCY7218284.1;Name=MCY7218284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904910.1;locus_tag=MK542_09025;product=YihY/virulence factor BrkB family protein;protein_id=MCY7218284.1;transl_table=11 JAKUZA010000064.1 Genbank gene 1249 2106 . - . ID=gene-MK542_09030;Name=MK542_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09030 JAKUZA010000064.1 Protein Homology CDS 1249 2106 . - 0 ID=cds-MCY7218285.1;Parent=gene-MK542_09030;Dbxref=NCBI_GP:MCY7218285.1;Name=MCY7218285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903404.1;locus_tag=MK542_09030;product=methionyl aminopeptidase;protein_id=MCY7218285.1;transl_table=11 JAKUZA010000064.1 Genbank gene 2166 3443 . - . ID=gene-MK542_09035;Name=spxR;gbkey=Gene;gene=spxR;gene_biotype=protein_coding;locus_tag=MK542_09035 JAKUZA010000064.1 Protein Homology CDS 2166 3443 . - 0 ID=cds-MCY7218286.1;Parent=gene-MK542_09035;Dbxref=NCBI_GP:MCY7218286.1;Name=MCY7218286.1;gbkey=CDS;gene=spxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465747.1;locus_tag=MK542_09035;product=CBS-HotDog domain-containing transcription factor SpxR;protein_id=MCY7218286.1;transl_table=11 JAKUZA010000064.1 Genbank gene 3436 3987 . - . ID=gene-MK542_09040;Name=MK542_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09040 JAKUZA010000064.1 Protein Homology CDS 3436 3987 . - 0 ID=cds-MCY7218287.1;Parent=gene-MK542_09040;Dbxref=NCBI_GP:MCY7218287.1;Name=MCY7218287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659355.1;locus_tag=MK542_09040;product=GNAT family N-acetyltransferase;protein_id=MCY7218287.1;transl_table=11 JAKUZA010000064.1 Genbank gene 4021 5280 . - . ID=gene-MK542_09045;Name=MK542_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09045 JAKUZA010000064.1 Protein Homology CDS 4021 5280 . - 0 ID=cds-MCY7218288.1;Parent=gene-MK542_09045;Dbxref=NCBI_GP:MCY7218288.1;Name=MCY7218288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904915.1;locus_tag=MK542_09045;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MCY7218288.1;transl_table=11 JAKUZA010000064.1 Genbank gene 5543 6223 . - . ID=gene-MK542_09050;Name=MK542_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09050 JAKUZA010000064.1 Protein Homology CDS 5543 6223 . - 0 ID=cds-MCY7218289.1;Parent=gene-MK542_09050;Dbxref=NCBI_GP:MCY7218289.1;Name=MCY7218289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914903.1;locus_tag=MK542_09050;product=DnaD domain-containing protein;protein_id=MCY7218289.1;transl_table=11 JAKUZA010000064.1 Genbank gene 6232 7173 . - . ID=gene-MK542_09055;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=MK542_09055 JAKUZA010000064.1 Protein Homology CDS 6232 7173 . - 0 ID=cds-MCY7218290.1;Parent=gene-MK542_09055;Dbxref=NCBI_GP:MCY7218290.1;Name=MCY7218290.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263079.1;locus_tag=MK542_09055;product=homoserine O-succinyltransferase;protein_id=MCY7218290.1;transl_table=11 JAKUZA010000064.1 Genbank gene 7274 7786 . - . ID=gene-MK542_09060;Name=MK542_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09060 JAKUZA010000064.1 Protein Homology CDS 7274 7786 . - 0 ID=cds-MCY7218291.1;Parent=gene-MK542_09060;Dbxref=NCBI_GP:MCY7218291.1;Name=MCY7218291.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=MK542_09060;product=adenine phosphoribosyltransferase;protein_id=MCY7218291.1;transl_table=11 JAKUZA010000064.1 Genbank gene 7909 10128 . - . ID=gene-MK542_09065;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=MK542_09065 JAKUZA010000064.1 Protein Homology CDS 7909 10128 . - 0 ID=cds-MCY7218292.1;Parent=gene-MK542_09065;Dbxref=NCBI_GP:MCY7218292.1;Name=MCY7218292.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186486.1;locus_tag=MK542_09065;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=MCY7218292.1;transl_table=11 JAKUZA010000064.1 Genbank gene 10353 11390 . - . ID=gene-MK542_09070;Name=MK542_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09070 JAKUZA010000064.1 Protein Homology CDS 10353 11390 . - 0 ID=cds-MCY7218293.1;Parent=gene-MK542_09070;Dbxref=NCBI_GP:MCY7218293.1;Name=MCY7218293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000415.1;locus_tag=MK542_09070;product=acyltransferase;protein_id=MCY7218293.1;transl_table=11 JAKUZA010000064.1 Genbank gene 11428 12138 . - . ID=gene-MK542_09075;Name=MK542_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09075 JAKUZA010000064.1 Protein Homology CDS 11428 12138 . - 0 ID=cds-MCY7218294.1;Parent=gene-MK542_09075;Dbxref=NCBI_GP:MCY7218294.1;Name=MCY7218294.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605143.1;locus_tag=MK542_09075;product=methyltransferase domain-containing protein;protein_id=MCY7218294.1;transl_table=11 JAKUZA010000064.1 Genbank gene 12145 12900 . - . ID=gene-MK542_09080;Name=MK542_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09080 JAKUZA010000064.1 Protein Homology CDS 12145 12900 . - 0 ID=cds-MCY7218295.1;Parent=gene-MK542_09080;Dbxref=NCBI_GP:MCY7218295.1;Name=MCY7218295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895169.1;locus_tag=MK542_09080;product=SDR family oxidoreductase;protein_id=MCY7218295.1;transl_table=11 JAKUZA010000064.1 Genbank gene 12897 13826 . - . ID=gene-MK542_09085;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=MK542_09085 JAKUZA010000064.1 Protein Homology CDS 12897 13826 . - 0 ID=cds-MCY7218296.1;Parent=gene-MK542_09085;Dbxref=NCBI_GP:MCY7218296.1;Name=MCY7218296.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354350.1;locus_tag=MK542_09085;product=ribonuclease Z;protein_id=MCY7218296.1;transl_table=11 JAKUZA010000064.1 Genbank gene 13837 14460 . - . ID=gene-MK542_09090;Name=MK542_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09090 JAKUZA010000064.1 Protein Homology CDS 13837 14460 . - 0 ID=cds-MCY7218297.1;Parent=gene-MK542_09090;Dbxref=NCBI_GP:MCY7218297.1;Name=MCY7218297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895165.1;locus_tag=MK542_09090;product=cystathionine beta-lyase;protein_id=MCY7218297.1;transl_table=11 JAKUZA010000064.1 Genbank gene 14453 15691 . - . ID=gene-MK542_09095;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=MK542_09095 JAKUZA010000064.1 Protein Homology CDS 14453 15691 . - 0 ID=cds-MCY7218298.1;Parent=gene-MK542_09095;Dbxref=NCBI_GP:MCY7218298.1;Name=MCY7218298.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900093.1;locus_tag=MK542_09095;product=GTPase HflX;protein_id=MCY7218298.1;transl_table=11 JAKUZA010000064.1 Genbank gene 15722 16606 . - . ID=gene-MK542_09100;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=MK542_09100 JAKUZA010000064.1 Protein Homology CDS 15722 16606 . - 0 ID=cds-MCY7218299.1;Parent=gene-MK542_09100;Dbxref=NCBI_GP:MCY7218299.1;Name=MCY7218299.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837132.1;locus_tag=MK542_09100;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MCY7218299.1;transl_table=11 JAKUZA010000064.1 Genbank gene 16689 16859 . + . ID=gene-MK542_09105;Name=MK542_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09105 JAKUZA010000064.1 Protein Homology CDS 16689 16859 . + 0 ID=cds-MCY7218300.1;Parent=gene-MK542_09105;Dbxref=NCBI_GP:MCY7218300.1;Name=MCY7218300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002781.1;locus_tag=MK542_09105;product=DUF3042 family protein;protein_id=MCY7218300.1;transl_table=11 JAKUZA010000064.1 Genbank gene 16971 17543 . - . ID=gene-MK542_09110;Name=MK542_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09110 JAKUZA010000064.1 Protein Homology CDS 16971 17543 . - 0 ID=cds-MCY7218301.1;Parent=gene-MK542_09110;Dbxref=NCBI_GP:MCY7218301.1;Name=MCY7218301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921461.1;locus_tag=MK542_09110;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7218301.1;transl_table=11 JAKUZA010000064.1 Genbank gene 17667 18509 . + . ID=gene-MK542_09115;Name=MK542_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09115 JAKUZA010000064.1 Protein Homology CDS 17667 18509 . + 0 ID=cds-MCY7218302.1;Parent=gene-MK542_09115;Dbxref=NCBI_GP:MCY7218302.1;Name=MCY7218302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187134.1;locus_tag=MK542_09115;product=DegV family protein;protein_id=MCY7218302.1;transl_table=11 JAKUZA010000064.1 Genbank gene 18599 19375 . + . ID=gene-MK542_09120;Name=MK542_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09120 JAKUZA010000064.1 Protein Homology CDS 18599 19375 . + 0 ID=cds-MCY7218303.1;Parent=gene-MK542_09120;Dbxref=NCBI_GP:MCY7218303.1;Name=MCY7218303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590524.1;locus_tag=MK542_09120;product=XRE family transcriptional regulator;protein_id=MCY7218303.1;transl_table=11 JAKUZA010000064.1 Genbank gene 19477 20028 . - . ID=gene-MK542_09125;Name=MK542_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09125 JAKUZA010000064.1 Protein Homology CDS 19477 20028 . - 0 ID=cds-MCY7218304.1;Parent=gene-MK542_09125;Dbxref=NCBI_GP:MCY7218304.1;Name=MCY7218304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371475.1;locus_tag=MK542_09125;product=DUF1697 domain-containing protein;protein_id=MCY7218304.1;transl_table=11 JAKUZA010000064.1 Genbank gene 20070 21893 . - . ID=gene-MK542_09130;Name=MK542_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09130 JAKUZA010000064.1 Protein Homology CDS 20070 21893 . - 0 ID=cds-MCY7218305.1;Parent=gene-MK542_09130;Dbxref=NCBI_GP:MCY7218305.1;Name=MCY7218305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604535.1;locus_tag=MK542_09130;product=DUF2971 domain-containing protein;protein_id=MCY7218305.1;transl_table=11 JAKUZA010000064.1 Genbank gene 21911 23899 . - . ID=gene-MK542_09135;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=MK542_09135 JAKUZA010000064.1 Protein Homology CDS 21911 23899 . - 0 ID=cds-MCY7218306.1;Parent=gene-MK542_09135;Dbxref=NCBI_GP:MCY7218306.1;Name=MCY7218306.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522053.1;locus_tag=MK542_09135;product=excinuclease ABC subunit B;protein_id=MCY7218306.1;transl_table=11 JAKUZA010000064.1 Genbank gene 24065 25012 . - . ID=gene-MK542_09140;Name=MK542_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09140 JAKUZA010000064.1 Protein Homology CDS 24065 25012 . - 0 ID=cds-MCY7218307.1;Parent=gene-MK542_09140;Dbxref=NCBI_GP:MCY7218307.1;Name=MCY7218307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924344.1;locus_tag=MK542_09140;product=CPBP family intramembrane metalloprotease;protein_id=MCY7218307.1;transl_table=11 JAKUZA010000064.1 Genbank gene 25289 25813 . - . ID=gene-MK542_09145;Name=MK542_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09145 JAKUZA010000064.1 Protein Homology CDS 25289 25813 . - 0 ID=cds-MCY7218308.1;Parent=gene-MK542_09145;Dbxref=NCBI_GP:MCY7218308.1;Name=MCY7218308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920952.1;locus_tag=MK542_09145;product=hypothetical protein;protein_id=MCY7218308.1;transl_table=11 JAKUZA010000064.1 Genbank gene 25860 27752 . - . ID=gene-MK542_09150;Name=MK542_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09150 JAKUZA010000064.1 Protein Homology CDS 25860 27752 . - 0 ID=cds-MCY7218309.1;Parent=gene-MK542_09150;Dbxref=NCBI_GP:MCY7218309.1;Name=MCY7218309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730907.1;locus_tag=MK542_09150;product=DUF3114 domain-containing protein;protein_id=MCY7218309.1;transl_table=11 JAKUZA010000064.1 Genbank gene 27742 28101 . - . ID=gene-MK542_09155;Name=MK542_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09155 JAKUZA010000064.1 Protein Homology CDS 27742 28101 . - 0 ID=cds-MCY7218310.1;Parent=gene-MK542_09155;Dbxref=NCBI_GP:MCY7218310.1;Name=MCY7218310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924339.1;locus_tag=MK542_09155;product=flagellar hook-associated protein;protein_id=MCY7218310.1;transl_table=11 JAKUZA010000064.1 Genbank gene 28106 28387 . - . ID=gene-MK542_09160;Name=MK542_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09160 JAKUZA010000064.1 Protein Homology CDS 28106 28387 . - 0 ID=cds-MCY7218311.1;Parent=gene-MK542_09160;Dbxref=NCBI_GP:MCY7218311.1;Name=MCY7218311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920946.1;locus_tag=MK542_09160;product=TIGR04197 family type VII secretion effector;protein_id=MCY7218311.1;transl_table=11 JAKUZA010000064.1 Genbank gene 28576 30750 . + . ID=gene-MK542_09165;Name=MK542_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09165 JAKUZA010000064.1 Protein Homology CDS 28576 30750 . + 0 ID=cds-MCY7218312.1;Parent=gene-MK542_09165;Dbxref=NCBI_GP:MCY7218312.1;Name=MCY7218312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007522057.1;locus_tag=MK542_09165;product=ABC transporter substrate-binding protein/permease;protein_id=MCY7218312.1;transl_table=11 JAKUZA010000064.1 Genbank gene 30750 31490 . + . ID=gene-MK542_09170;Name=MK542_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09170 JAKUZA010000064.1 Protein Homology CDS 30750 31490 . + 0 ID=cds-MCY7218313.1;Parent=gene-MK542_09170;Dbxref=NCBI_GP:MCY7218313.1;Name=MCY7218313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=MK542_09170;product=amino acid ABC transporter ATP-binding protein;protein_id=MCY7218313.1;transl_table=11 JAKUZA010000064.1 Genbank gene 31861 33387 . + . ID=gene-MK542_09175;Name=MK542_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09175 JAKUZA010000064.1 Protein Homology CDS 31861 33387 . + 0 ID=cds-MCY7218314.1;Parent=gene-MK542_09175;Dbxref=NCBI_GP:MCY7218314.1;Name=MCY7218314.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900154.1;locus_tag=MK542_09175;product=ATP-binding cassette domain-containing protein;protein_id=MCY7218314.1;transl_table=11 ##sequence-region JAKUZA010000065.1 1 17778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000065.1 Genbank region 1 17778 . + . ID=JAKUZA010000065.1:1..17778;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000065.1 Genbank gene 1 158 . + . ID=gene-MK542_09180;Name=MK542_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09180;partial=true;start_range=.,1 JAKUZA010000065.1 Protein Homology CDS 1 158 . + 2 ID=cds-MCY7218315.1;Parent=gene-MK542_09180;Dbxref=NCBI_GP:MCY7218315.1;Name=MCY7218315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_09180;partial=true;product=IS481 family transposase;protein_id=MCY7218315.1;start_range=.,1;transl_table=11 JAKUZA010000065.1 Genbank gene 322 843 . + . ID=gene-MK542_09185;Name=MK542_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09185 JAKUZA010000065.1 Protein Homology CDS 322 843 . + 0 ID=cds-MCY7218316.1;Parent=gene-MK542_09185;Dbxref=NCBI_GP:MCY7218316.1;Name=MCY7218316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606028.1;locus_tag=MK542_09185;product=AAA family ATPase;protein_id=MCY7218316.1;transl_table=11 JAKUZA010000065.1 Genbank gene 949 1566 . + . ID=gene-MK542_09190;Name=MK542_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09190 JAKUZA010000065.1 Protein Homology CDS 949 1566 . + 0 ID=cds-MCY7218317.1;Parent=gene-MK542_09190;Dbxref=NCBI_GP:MCY7218317.1;Name=MCY7218317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003001432.1;locus_tag=MK542_09190;product=SAP domain-containing protein;protein_id=MCY7218317.1;transl_table=11 JAKUZA010000065.1 Genbank gene 1840 2523 . + . ID=gene-MK542_09195;Name=MK542_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09195 JAKUZA010000065.1 Protein Homology CDS 1840 2523 . + 0 ID=cds-MCY7218318.1;Parent=gene-MK542_09195;Dbxref=NCBI_GP:MCY7218318.1;Name=MCY7218318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907054.1;locus_tag=MK542_09195;product=EcsC family protein;protein_id=MCY7218318.1;transl_table=11 JAKUZA010000065.1 Genbank gene 2918 3379 . + . ID=gene-MK542_09200;Name=MK542_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09200 JAKUZA010000065.1 Protein Homology CDS 2918 3379 . + 0 ID=cds-MCY7218319.1;Parent=gene-MK542_09200;Dbxref=NCBI_GP:MCY7218319.1;Name=MCY7218319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889823.1;locus_tag=MK542_09200;product=TFIIB-type zinc ribbon-containing protein;protein_id=MCY7218319.1;transl_table=11 JAKUZA010000065.1 Genbank gene 3369 4172 . + . ID=gene-MK542_09205;Name=MK542_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09205 JAKUZA010000065.1 Protein Homology CDS 3369 4172 . + 0 ID=cds-MCY7218320.1;Parent=gene-MK542_09205;Dbxref=NCBI_GP:MCY7218320.1;Name=MCY7218320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009354872.1;locus_tag=MK542_09205;product=conjugal transfer protein;protein_id=MCY7218320.1;transl_table=11 JAKUZA010000065.1 Genbank gene 4560 5825 . - . ID=gene-MK542_09210;Name=MK542_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09210 JAKUZA010000065.1 Protein Homology CDS 4560 5825 . - 0 ID=cds-MCY7218321.1;Parent=gene-MK542_09210;Dbxref=NCBI_GP:MCY7218321.1;Name=MCY7218321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013904617.1;locus_tag=MK542_09210;product=site-specific integrase;protein_id=MCY7218321.1;transl_table=11 JAKUZA010000065.1 Genbank gene 5915 6175 . - . ID=gene-MK542_09215;Name=MK542_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09215 JAKUZA010000065.1 Protein Homology CDS 5915 6175 . - 0 ID=cds-MCY7218322.1;Parent=gene-MK542_09215;Dbxref=NCBI_GP:MCY7218322.1;Name=MCY7218322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013904618.1;locus_tag=MK542_09215;product=helix-turn-helix domain-containing protein;protein_id=MCY7218322.1;transl_table=11 JAKUZA010000065.1 Genbank gene 6165 6752 . - . ID=gene-MK542_09220;Name=MK542_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09220 JAKUZA010000065.1 Protein Homology CDS 6165 6752 . - 0 ID=cds-MCY7218323.1;Parent=gene-MK542_09220;Dbxref=NCBI_GP:MCY7218323.1;Name=MCY7218323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003074317.1;locus_tag=MK542_09220;product=replication protein;protein_id=MCY7218323.1;transl_table=11 JAKUZA010000065.1 Genbank gene 6947 7564 . - . ID=gene-MK542_09225;Name=MK542_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09225 JAKUZA010000065.1 Protein Homology CDS 6947 7564 . - 0 ID=cds-MCY7218324.1;Parent=gene-MK542_09225;Dbxref=NCBI_GP:MCY7218324.1;Name=MCY7218324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012962633.1;locus_tag=MK542_09225;product=hypothetical protein;protein_id=MCY7218324.1;transl_table=11 JAKUZA010000065.1 Genbank gene 7567 8643 . - . ID=gene-MK542_09230;Name=MK542_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09230 JAKUZA010000065.1 Protein Homology CDS 7567 8643 . - 0 ID=cds-MCY7218325.1;Parent=gene-MK542_09230;Dbxref=NCBI_GP:MCY7218325.1;Name=MCY7218325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002272712.1;locus_tag=MK542_09230;product=cell division protein FtsK;protein_id=MCY7218325.1;transl_table=11 JAKUZA010000065.1 Genbank gene 8643 8957 . - . ID=gene-MK542_09235;Name=MK542_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09235 JAKUZA010000065.1 Protein Homology CDS 8643 8957 . - 0 ID=cds-MCY7218326.1;Parent=gene-MK542_09235;Dbxref=NCBI_GP:MCY7218326.1;Name=MCY7218326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002285155.1;locus_tag=MK542_09235;product=hypothetical protein;protein_id=MCY7218326.1;transl_table=11 JAKUZA010000065.1 Genbank gene 9111 9545 . - . ID=gene-MK542_09240;Name=MK542_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09240 JAKUZA010000065.1 Protein Homology CDS 9111 9545 . - 0 ID=cds-MCY7218327.1;Parent=gene-MK542_09240;Dbxref=NCBI_GP:MCY7218327.1;Name=MCY7218327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182713.1;locus_tag=MK542_09240;product=sigma-70 family RNA polymerase sigma factor;protein_id=MCY7218327.1;transl_table=11 JAKUZA010000065.1 Genbank gene 10077 11681 . + . ID=gene-MK542_09245;Name=MK542_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09245 JAKUZA010000065.1 Protein Homology CDS 10077 11681 . + 0 ID=cds-MCY7218328.1;Parent=gene-MK542_09245;Dbxref=NCBI_GP:MCY7218328.1;Name=MCY7218328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015530029.1;locus_tag=MK542_09245;product=type I restriction-modification system subunit M;protein_id=MCY7218328.1;transl_table=11 JAKUZA010000065.1 Genbank gene 11668 12792 . + . ID=gene-MK542_09250;Name=MK542_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09250 JAKUZA010000065.1 Protein Homology CDS 11668 12792 . + 0 ID=cds-MCY7218329.1;Parent=gene-MK542_09250;Dbxref=NCBI_GP:MCY7218329.1;Name=MCY7218329.1;Ontology_term=GO:0006304;gbkey=CDS;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875679.1;locus_tag=MK542_09250;product=restriction endonuclease subunit S;protein_id=MCY7218329.1;transl_table=11 JAKUZA010000065.1 Genbank gene 12785 15919 . + . ID=gene-MK542_09255;Name=MK542_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09255 JAKUZA010000065.1 Protein Homology CDS 12785 15919 . + 0 ID=cds-MCY7218330.1;Parent=gene-MK542_09255;Dbxref=NCBI_GP:MCY7218330.1;Name=MCY7218330.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123864.1;locus_tag=MK542_09255;product=HsdR family type I site-specific deoxyribonuclease;protein_id=MCY7218330.1;transl_table=11 JAKUZA010000065.1 Genbank gene 15935 17778 . + . ID=gene-MK542_09260;Name=MK542_09260;end_range=17778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09260;partial=true JAKUZA010000065.1 GeneMarkS-2+ CDS 15935 17778 . + 0 ID=cds-MCY7218331.1;Parent=gene-MK542_09260;Dbxref=NCBI_GP:MCY7218331.1;Name=MCY7218331.1;end_range=17778,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09260;partial=true;product=hypothetical protein;protein_id=MCY7218331.1;transl_table=11 ##sequence-region JAKUZA010000066.1 1 40874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000066.1 Genbank region 1 40874 . + . ID=JAKUZA010000066.1:1..40874;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000066.1 Genbank gene 97 1446 . + . ID=gene-MK542_09265;Name=MK542_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09265 JAKUZA010000066.1 Protein Homology CDS 97 1446 . + 0 ID=cds-MCY7218332.1;Parent=gene-MK542_09265;Dbxref=NCBI_GP:MCY7218332.1;Name=MCY7218332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590757.1;locus_tag=MK542_09265;product=DUF1958 domain-containing protein;protein_id=MCY7218332.1;transl_table=11 JAKUZA010000066.1 Genbank gene 1652 2776 . + . ID=gene-MK542_09270;Name=MK542_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09270 JAKUZA010000066.1 Protein Homology CDS 1652 2776 . + 0 ID=cds-MCY7218333.1;Parent=gene-MK542_09270;Dbxref=NCBI_GP:MCY7218333.1;Name=MCY7218333.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929816.1;locus_tag=MK542_09270;product=MFS transporter;protein_id=MCY7218333.1;transl_table=11 JAKUZA010000066.1 Genbank gene 2934 3893 . + . ID=gene-MK542_09275;Name=MK542_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09275 JAKUZA010000066.1 Protein Homology CDS 2934 3893 . + 0 ID=cds-MCY7218334.1;Parent=gene-MK542_09275;Dbxref=NCBI_GP:MCY7218334.1;Name=MCY7218334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590755.1;locus_tag=MK542_09275;product=competence protein CoiA;protein_id=MCY7218334.1;transl_table=11 JAKUZA010000066.1 Genbank gene 3914 5716 . + . ID=gene-MK542_09280;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=MK542_09280 JAKUZA010000066.1 Protein Homology CDS 3914 5716 . + 0 ID=cds-MCY7218335.1;Parent=gene-MK542_09280;Dbxref=NCBI_GP:MCY7218335.1;Name=MCY7218335.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252660.1;locus_tag=MK542_09280;product=oligoendopeptidase F;protein_id=MCY7218335.1;transl_table=11 JAKUZA010000066.1 Genbank gene 5718 6401 . + . ID=gene-MK542_09285;Name=MK542_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09285 JAKUZA010000066.1 Protein Homology CDS 5718 6401 . + 0 ID=cds-MCY7218336.1;Parent=gene-MK542_09285;Dbxref=NCBI_GP:MCY7218336.1;Name=MCY7218336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836701.1;locus_tag=MK542_09285;product=O-methyltransferase;protein_id=MCY7218336.1;transl_table=11 JAKUZA010000066.1 Genbank gene 6518 7537 . + . ID=gene-MK542_09290;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=MK542_09290 JAKUZA010000066.1 Protein Homology CDS 6518 7537 . + 0 ID=cds-MCY7218337.1;Parent=gene-MK542_09290;Dbxref=NCBI_GP:MCY7218337.1;Name=MCY7218337.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659886.1;locus_tag=MK542_09290;product=peptidylprolyl isomerase PrsA;protein_id=MCY7218337.1;transl_table=11 JAKUZA010000066.1 Genbank gene 7678 8259 . + . ID=gene-MK542_09295;Name=MK542_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09295 JAKUZA010000066.1 Protein Homology CDS 7678 8259 . + 0 ID=cds-MCY7218338.1;Parent=gene-MK542_09295;Dbxref=NCBI_GP:MCY7218338.1;Name=MCY7218338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191847.1;locus_tag=MK542_09295;product=LURP-one-related family protein;protein_id=MCY7218338.1;transl_table=11 JAKUZA010000066.1 Genbank gene 8298 10916 . + . ID=gene-MK542_09300;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=MK542_09300 JAKUZA010000066.1 Protein Homology CDS 8298 10916 . + 0 ID=cds-MCY7218339.1;Parent=gene-MK542_09300;Dbxref=NCBI_GP:MCY7218339.1;Name=MCY7218339.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130635.1;locus_tag=MK542_09300;product=alanine--tRNA ligase;protein_id=MCY7218339.1;transl_table=11 JAKUZA010000066.1 Genbank gene 11086 12108 . + . ID=gene-MK542_09305;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=MK542_09305 JAKUZA010000066.1 Protein Homology CDS 11086 12108 . + 0 ID=cds-MCY7218340.1;Parent=gene-MK542_09305;Dbxref=NCBI_GP:MCY7218340.1;Name=MCY7218340.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925440.1;locus_tag=MK542_09305;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=MCY7218340.1;transl_table=11 JAKUZA010000066.1 Genbank gene 12126 13319 . + . ID=gene-MK542_09310;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=MK542_09310 JAKUZA010000066.1 Protein Homology CDS 12126 13319 . + 0 ID=cds-MCY7218341.1;Parent=gene-MK542_09310;Dbxref=NCBI_GP:MCY7218341.1;Name=MCY7218341.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011225582.1;locus_tag=MK542_09310;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=MCY7218341.1;transl_table=11 JAKUZA010000066.1 Genbank gene 13331 14068 . + . ID=gene-MK542_09315;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=MK542_09315 JAKUZA010000066.1 Protein Homology CDS 13331 14068 . + 0 ID=cds-MCY7218342.1;Parent=gene-MK542_09315;Dbxref=NCBI_GP:MCY7218342.1;Name=MCY7218342.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896034.1;locus_tag=MK542_09315;product=acetylglutamate kinase;protein_id=MCY7218342.1;transl_table=11 JAKUZA010000066.1 Genbank gene 14071 15210 . + . ID=gene-MK542_09320;Name=MK542_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09320 JAKUZA010000066.1 Protein Homology CDS 14071 15210 . + 0 ID=cds-MCY7218343.1;Parent=gene-MK542_09320;Dbxref=NCBI_GP:MCY7218343.1;Name=MCY7218343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915604.1;locus_tag=MK542_09320;product=acetylornithine transaminase;protein_id=MCY7218343.1;transl_table=11 JAKUZA010000066.1 Genbank gene 15446 15679 . + . ID=gene-MK542_09325;Name=MK542_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09325 JAKUZA010000066.1 GeneMarkS-2+ CDS 15446 15679 . + 0 ID=cds-MCY7218344.1;Parent=gene-MK542_09325;Dbxref=NCBI_GP:MCY7218344.1;Name=MCY7218344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09325;product=hypothetical protein;protein_id=MCY7218344.1;transl_table=11 JAKUZA010000066.1 Genbank gene 15691 15897 . + . ID=gene-MK542_09330;Name=MK542_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09330 JAKUZA010000066.1 Protein Homology CDS 15691 15897 . + 0 ID=cds-MCY7218345.1;Parent=gene-MK542_09330;Dbxref=NCBI_GP:MCY7218345.1;Name=MCY7218345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176227.1;locus_tag=MK542_09330;product=helix-turn-helix transcriptional regulator;protein_id=MCY7218345.1;transl_table=11 JAKUZA010000066.1 Genbank gene 16064 16417 . + . ID=gene-MK542_09335;Name=MK542_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09335 JAKUZA010000066.1 Protein Homology CDS 16064 16417 . + 0 ID=cds-MCY7218346.1;Parent=gene-MK542_09335;Dbxref=NCBI_GP:MCY7218346.1;Name=MCY7218346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015957.2;locus_tag=MK542_09335;product=PspC domain-containing protein;protein_id=MCY7218346.1;transl_table=11 JAKUZA010000066.1 Genbank gene 16433 17173 . + . ID=gene-MK542_09340;Name=MK542_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09340 JAKUZA010000066.1 Protein Homology CDS 16433 17173 . + 0 ID=cds-MCY7218347.1;Parent=gene-MK542_09340;Dbxref=NCBI_GP:MCY7218347.1;Name=MCY7218347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130629.1;locus_tag=MK542_09340;product=DUF3169 family protein;protein_id=MCY7218347.1;transl_table=11 JAKUZA010000066.1 Genbank gene 17203 17757 . + . ID=gene-MK542_09345;Name=MK542_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09345 JAKUZA010000066.1 Protein Homology CDS 17203 17757 . + 0 ID=cds-MCY7218348.1;Parent=gene-MK542_09345;Dbxref=NCBI_GP:MCY7218348.1;Name=MCY7218348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590736.1;locus_tag=MK542_09345;product=DUF3267 domain-containing protein;protein_id=MCY7218348.1;transl_table=11 JAKUZA010000066.1 Genbank gene 18051 19511 . - . ID=gene-MK542_09350;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=MK542_09350 JAKUZA010000066.1 Protein Homology CDS 18051 19511 . - 0 ID=cds-MCY7218349.1;Parent=gene-MK542_09350;Dbxref=NCBI_GP:MCY7218349.1;Name=MCY7218349.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190862.1;locus_tag=MK542_09350;product=glucose-6-phosphate dehydrogenase;protein_id=MCY7218349.1;transl_table=11 JAKUZA010000066.1 Genbank gene 19634 20998 . - . ID=gene-MK542_09355;Name=MK542_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09355 JAKUZA010000066.1 Protein Homology CDS 19634 20998 . - 0 ID=cds-MCY7218350.1;Parent=gene-MK542_09355;Dbxref=NCBI_GP:MCY7218350.1;Name=MCY7218350.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589450.1;locus_tag=MK542_09355;product=MFS transporter;protein_id=MCY7218350.1;transl_table=11 JAKUZA010000066.1 Genbank gene 21206 22021 . - . ID=gene-MK542_09360;Name=MK542_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09360 JAKUZA010000066.1 Protein Homology CDS 21206 22021 . - 0 ID=cds-MCY7218351.1;Parent=gene-MK542_09360;Dbxref=NCBI_GP:MCY7218351.1;Name=MCY7218351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617844.1;locus_tag=MK542_09360;product=TIGR03943 family protein;protein_id=MCY7218351.1;transl_table=11 JAKUZA010000066.1 Genbank gene 22018 22923 . - . ID=gene-MK542_09365;Name=MK542_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09365 JAKUZA010000066.1 Protein Homology CDS 22018 22923 . - 0 ID=cds-MCY7218352.1;Parent=gene-MK542_09365;Dbxref=NCBI_GP:MCY7218352.1;Name=MCY7218352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009443272.1;locus_tag=MK542_09365;product=permease;protein_id=MCY7218352.1;transl_table=11 JAKUZA010000066.1 Genbank gene 22920 23057 . - . ID=gene-MK542_09370;Name=MK542_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09370 JAKUZA010000066.1 Protein Homology CDS 22920 23057 . - 0 ID=cds-MCY7218353.1;Parent=gene-MK542_09370;Dbxref=NCBI_GP:MCY7218353.1;Name=MCY7218353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894961.1;locus_tag=MK542_09370;product=hypothetical protein;protein_id=MCY7218353.1;transl_table=11 JAKUZA010000066.1 Genbank gene 23230 25362 . + . ID=gene-MK542_09375;Name=MK542_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09375 JAKUZA010000066.1 Protein Homology CDS 23230 25362 . + 0 ID=cds-MCY7218354.1;Parent=gene-MK542_09375;Dbxref=NCBI_GP:MCY7218354.1;Name=MCY7218354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931050.1;locus_tag=MK542_09375;product=RNA-binding transcriptional accessory protein;protein_id=MCY7218354.1;transl_table=11 JAKUZA010000066.1 Genbank gene 25349 25807 . + . ID=gene-MK542_09380;Name=MK542_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09380 JAKUZA010000066.1 Protein Homology CDS 25349 25807 . + 0 ID=cds-MCY7218355.1;Parent=gene-MK542_09380;Dbxref=NCBI_GP:MCY7218355.1;Name=MCY7218355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589455.1;locus_tag=MK542_09380;product=SprT family protein;protein_id=MCY7218355.1;transl_table=11 JAKUZA010000066.1 Genbank gene 25902 26174 . + . ID=gene-MK542_09385;Name=MK542_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09385 JAKUZA010000066.1 Protein Homology CDS 25902 26174 . + 0 ID=cds-MCY7218356.1;Parent=gene-MK542_09385;Dbxref=NCBI_GP:MCY7218356.1;Name=MCY7218356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605217.1;locus_tag=MK542_09385;product=PspC domain-containing protein;protein_id=MCY7218356.1;transl_table=11 JAKUZA010000066.1 Genbank gene 26253 26753 . + . ID=gene-MK542_09390;Name=MK542_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09390 JAKUZA010000066.1 Protein Homology CDS 26253 26753 . + 0 ID=cds-MCY7218357.1;Parent=gene-MK542_09390;Dbxref=NCBI_GP:MCY7218357.1;Name=MCY7218357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809047.1;locus_tag=MK542_09390;product=NUDIX hydrolase;protein_id=MCY7218357.1;transl_table=11 JAKUZA010000066.1 Genbank gene 27155 28250 . + . ID=gene-MK542_09395;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=MK542_09395 JAKUZA010000066.1 Protein Homology CDS 27155 27226 . + 0 ID=cds-MCY7218358.1;Parent=gene-MK542_09395;Dbxref=NCBI_GP:MCY7218358.1;Name=MCY7218358.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130522.1;locus_tag=MK542_09395;product=peptide chain release factor 2;protein_id=MCY7218358.1;transl_table=11 JAKUZA010000066.1 Protein Homology CDS 27228 28250 . + 0 ID=cds-MCY7218358.1;Parent=gene-MK542_09395;Dbxref=NCBI_GP:MCY7218358.1;Name=MCY7218358.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130522.1;locus_tag=MK542_09395;product=peptide chain release factor 2;protein_id=MCY7218358.1;transl_table=11 JAKUZA010000066.1 Genbank gene 28325 29017 . + . ID=gene-MK542_09400;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=MK542_09400 JAKUZA010000066.1 Protein Homology CDS 28325 29017 . + 0 ID=cds-MCY7218359.1;Parent=gene-MK542_09400;Dbxref=NCBI_GP:MCY7218359.1;Name=MCY7218359.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130521.1;locus_tag=MK542_09400;product=cell division ATP-binding protein FtsE;protein_id=MCY7218359.1;transl_table=11 JAKUZA010000066.1 Genbank gene 29010 29936 . + . ID=gene-MK542_09405;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=MK542_09405 JAKUZA010000066.1 Protein Homology CDS 29010 29936 . + 0 ID=cds-MCY7218360.1;Parent=gene-MK542_09405;Dbxref=NCBI_GP:MCY7218360.1;Name=MCY7218360.1;Ontology_term=GO:0016021;gbkey=CDS;gene=ftsX;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604644.1;locus_tag=MK542_09405;product=permease-like cell division protein FtsX;protein_id=MCY7218360.1;transl_table=11 JAKUZA010000066.1 Genbank gene 30021 30653 . - . ID=gene-MK542_09410;Name=MK542_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09410 JAKUZA010000066.1 Protein Homology CDS 30021 30653 . - 0 ID=cds-MCY7218361.1;Parent=gene-MK542_09410;Dbxref=NCBI_GP:MCY7218361.1;Name=MCY7218361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862866.1;locus_tag=MK542_09410;product=MBL fold metallo-hydrolase;protein_id=MCY7218361.1;transl_table=11 JAKUZA010000066.1 Genbank gene 30786 33230 . + . ID=gene-MK542_09415;Name=MK542_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09415 JAKUZA010000066.1 Protein Homology CDS 30786 33230 . + 0 ID=cds-MCY7218362.1;Parent=gene-MK542_09415;Dbxref=NCBI_GP:MCY7218362.1;Name=MCY7218362.1;Ontology_term=GO:0006139,GO:0006260,GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA,DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930034.1;locus_tag=MK542_09415;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=MCY7218362.1;transl_table=11 JAKUZA010000066.1 Genbank gene 33346 34320 . + . ID=gene-MK542_09420;Name=MK542_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09420 JAKUZA010000066.1 Protein Homology CDS 33346 34320 . + 0 ID=cds-MCY7218363.1;Parent=gene-MK542_09420;Dbxref=NCBI_GP:MCY7218363.1;Name=MCY7218363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589706.1;locus_tag=MK542_09420;product=YeiH family protein;protein_id=MCY7218363.1;transl_table=11 JAKUZA010000066.1 Genbank gene 34333 35565 . + . ID=gene-MK542_09425;Name=MK542_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09425 JAKUZA010000066.1 Protein Homology CDS 34333 35565 . + 0 ID=cds-MCY7218364.1;Parent=gene-MK542_09425;Dbxref=NCBI_GP:MCY7218364.1;Name=MCY7218364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895877.1;locus_tag=MK542_09425;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MCY7218364.1;transl_table=11 JAKUZA010000066.1 Genbank gene 35603 36151 . + . ID=gene-MK542_09430;Name=MK542_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09430 JAKUZA010000066.1 Protein Homology CDS 35603 36151 . + 0 ID=cds-MCY7218365.1;Parent=gene-MK542_09430;Dbxref=NCBI_GP:MCY7218365.1;Name=MCY7218365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002930039.1;locus_tag=MK542_09430;product=DJ-1/PfpI family protein;protein_id=MCY7218365.1;transl_table=11 JAKUZA010000066.1 Genbank gene 36275 36853 . + . ID=gene-MK542_09435;Name=MK542_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09435 JAKUZA010000066.1 Protein Homology CDS 36275 36853 . + 0 ID=cds-MCY7218366.1;Parent=gene-MK542_09435;Dbxref=NCBI_GP:MCY7218366.1;Name=MCY7218366.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589709.1;locus_tag=MK542_09435;product=HAD-IA family hydrolase;protein_id=MCY7218366.1;transl_table=11 JAKUZA010000066.1 Genbank gene 36855 38804 . + . ID=gene-MK542_09440;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=MK542_09440 JAKUZA010000066.1 Protein Homology CDS 36855 38804 . + 0 ID=cds-MCY7218367.1;Parent=gene-MK542_09440;Dbxref=NCBI_GP:MCY7218367.1;Name=MCY7218367.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604652.1;locus_tag=MK542_09440;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=MCY7218367.1;transl_table=11 JAKUZA010000066.1 Genbank gene 38891 40615 . + . ID=gene-MK542_09445;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=MK542_09445 JAKUZA010000066.1 Protein Homology CDS 38891 40615 . + 0 ID=cds-MCY7218368.1;Parent=gene-MK542_09445;Dbxref=NCBI_GP:MCY7218368.1;Name=MCY7218368.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660575.1;locus_tag=MK542_09445;product=septation ring formation regulator EzrA;protein_id=MCY7218368.1;transl_table=11 JAKUZA010000066.1 Genbank gene 40675 40874 . - . ID=gene-MK542_09450;Name=MK542_09450;end_range=40874,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09450;partial=true JAKUZA010000066.1 Protein Homology CDS 40675 40874 . - 2 ID=cds-MCY7218369.1;Parent=gene-MK542_09450;Dbxref=NCBI_GP:MCY7218369.1;Name=MCY7218369.1;end_range=40874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_09450;partial=true;product=transposase;protein_id=MCY7218369.1;transl_table=11 ##sequence-region JAKUZA010000067.1 1 2700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000067.1 Genbank region 1 2700 . + . ID=JAKUZA010000067.1:1..2700;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000067.1 Genbank gene 39 746 . - . ID=gene-MK542_09455;Name=MK542_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09455 JAKUZA010000067.1 Protein Homology CDS 39 746 . - 0 ID=cds-MCY7218370.1;Parent=gene-MK542_09455;Dbxref=NCBI_GP:MCY7218370.1;Name=MCY7218370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590758.1;locus_tag=MK542_09455;product=glucosamine-6-phosphate deaminase;protein_id=MCY7218370.1;transl_table=11 JAKUZA010000067.1 Genbank gene 1066 2094 . + . ID=gene-MK542_09460;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=MK542_09460 JAKUZA010000067.1 Protein Homology CDS 1066 2094 . + 0 ID=cds-MCY7218371.1;Parent=gene-MK542_09460;Dbxref=NCBI_GP:MCY7218371.1;Name=MCY7218371.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605467.1;locus_tag=MK542_09460;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=MCY7218371.1;transl_table=11 JAKUZA010000067.1 Genbank gene 2109 2579 . + . ID=gene-MK542_09465;Name=MK542_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09465 JAKUZA010000067.1 Protein Homology CDS 2109 2579 . + 0 ID=cds-MCY7218372.1;Parent=gene-MK542_09465;Dbxref=NCBI_GP:MCY7218372.1;Name=MCY7218372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130653.1;locus_tag=MK542_09465;product=arginine repressor;protein_id=MCY7218372.1;transl_table=11 ##sequence-region JAKUZA010000068.1 1 15935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000068.1 Genbank region 1 15935 . + . ID=JAKUZA010000068.1:1..15935;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000068.1 Genbank gene 120 1013 . - . ID=gene-MK542_09470;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=MK542_09470 JAKUZA010000068.1 Protein Homology CDS 120 1013 . - 0 ID=cds-MCY7218373.1;Parent=gene-MK542_09470;Dbxref=NCBI_GP:MCY7218373.1;Name=MCY7218373.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068114.1;locus_tag=MK542_09470;product=zinc metalloprotease HtpX;protein_id=MCY7218373.1;transl_table=11 JAKUZA010000068.1 Genbank gene 1015 1584 . - . ID=gene-MK542_09475;Name=MK542_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09475 JAKUZA010000068.1 Protein Homology CDS 1015 1584 . - 0 ID=cds-MCY7218374.1;Parent=gene-MK542_09475;Dbxref=NCBI_GP:MCY7218374.1;Name=MCY7218374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219838.1;locus_tag=MK542_09475;product=LemA family protein;protein_id=MCY7218374.1;transl_table=11 JAKUZA010000068.1 Genbank gene 1736 2338 . + . ID=gene-MK542_09480;Name=MK542_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09480 JAKUZA010000068.1 Protein Homology CDS 1736 2338 . + 0 ID=cds-MCY7218375.1;Parent=gene-MK542_09480;Dbxref=NCBI_GP:MCY7218375.1;Name=MCY7218375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999999.1;locus_tag=MK542_09480;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7218375.1;transl_table=11 JAKUZA010000068.1 Genbank gene 2351 3640 . + . ID=gene-MK542_09485;Name=MK542_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09485 JAKUZA010000068.1 Protein Homology CDS 2351 3640 . + 0 ID=cds-MCY7218376.1;Parent=gene-MK542_09485;Dbxref=NCBI_GP:MCY7218376.1;Name=MCY7218376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907078.1;locus_tag=MK542_09485;product=MFS transporter;protein_id=MCY7218376.1;transl_table=11 JAKUZA010000068.1 Genbank gene 3808 4017 . + . ID=gene-MK542_09490;Name=MK542_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09490 JAKUZA010000068.1 GeneMarkS-2+ CDS 3808 4017 . + 0 ID=cds-MCY7218377.1;Parent=gene-MK542_09490;Dbxref=NCBI_GP:MCY7218377.1;Name=MCY7218377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09490;product=hypothetical protein;protein_id=MCY7218377.1;transl_table=11 JAKUZA010000068.1 Genbank gene 4180 4893 . + . ID=gene-MK542_09495;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=MK542_09495 JAKUZA010000068.1 Protein Homology CDS 4180 4893 . + 0 ID=cds-MCY7218378.1;Parent=gene-MK542_09495;Dbxref=NCBI_GP:MCY7218378.1;Name=MCY7218378.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260112.1;locus_tag=MK542_09495;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=MCY7218378.1;transl_table=11 JAKUZA010000068.1 Genbank gene 4986 5822 . - . ID=gene-MK542_09500;Name=MK542_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09500 JAKUZA010000068.1 Protein Homology CDS 4986 5822 . - 0 ID=cds-MCY7218379.1;Parent=gene-MK542_09500;Dbxref=NCBI_GP:MCY7218379.1;Name=MCY7218379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925608.1;locus_tag=MK542_09500;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCY7218379.1;transl_table=11 JAKUZA010000068.1 Genbank gene 5815 7497 . - . ID=gene-MK542_09505;Name=MK542_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09505 JAKUZA010000068.1 Protein Homology CDS 5815 7497 . - 0 ID=cds-MCY7218380.1;Parent=gene-MK542_09505;Dbxref=NCBI_GP:MCY7218380.1;Name=MCY7218380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605647.1;locus_tag=MK542_09505;product=ABC transporter ATP-binding protein;protein_id=MCY7218380.1;transl_table=11 JAKUZA010000068.1 Genbank gene 7506 8267 . - . ID=gene-MK542_09510;Name=MK542_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09510 JAKUZA010000068.1 Protein Homology CDS 7506 8267 . - 0 ID=cds-MCY7218381.1;Parent=gene-MK542_09510;Dbxref=NCBI_GP:MCY7218381.1;Name=MCY7218381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187976.1;locus_tag=MK542_09510;product=nucleoside phosphorylase;protein_id=MCY7218381.1;transl_table=11 JAKUZA010000068.1 Genbank gene 8783 9445 . - . ID=gene-MK542_09515;Name=MK542_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09515 JAKUZA010000068.1 Protein Homology CDS 8783 9445 . - 0 ID=cds-MCY7218382.1;Parent=gene-MK542_09515;Dbxref=NCBI_GP:MCY7218382.1;Name=MCY7218382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.2;locus_tag=MK542_09515;product=antibiotic biosynthesis monooxygenase;protein_id=MCY7218382.1;transl_table=11 JAKUZA010000068.1 Genbank gene 9458 10372 . - . ID=gene-MK542_09520;Name=MK542_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09520 JAKUZA010000068.1 Protein Homology CDS 9458 10372 . - 0 ID=cds-MCY7218383.1;Parent=gene-MK542_09520;Dbxref=NCBI_GP:MCY7218383.1;Name=MCY7218383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003082352.1;locus_tag=MK542_09520;product=amidohydrolase family protein;protein_id=MCY7218383.1;transl_table=11 JAKUZA010000068.1 Genbank gene 10538 11524 . - . ID=gene-MK542_09525;Name=MK542_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09525 JAKUZA010000068.1 Protein Homology CDS 10538 11524 . - 0 ID=cds-MCY7218384.1;Parent=gene-MK542_09525;Dbxref=NCBI_GP:MCY7218384.1;Name=MCY7218384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729619.1;locus_tag=MK542_09525;product=rhodanese-related sulfurtransferase;protein_id=MCY7218384.1;transl_table=11 JAKUZA010000068.1 Genbank pseudogene 11660 12147 . - . ID=gene-MK542_09530;Name=MK542_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_09530;pseudo=true JAKUZA010000068.1 Protein Homology CDS 11660 12147 . - 0 ID=cds-MK542_09530;Parent=gene-MK542_09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896267.1;locus_tag=MK542_09530;product=hypothetical protein;pseudo=true;transl_table=11 JAKUZA010000068.1 Genbank gene 12157 12834 . - . ID=gene-MK542_09535;Name=MK542_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09535 JAKUZA010000068.1 Protein Homology CDS 12157 12834 . - 0 ID=cds-MCY7218385.1;Parent=gene-MK542_09535;Dbxref=NCBI_GP:MCY7218385.1;Name=MCY7218385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605660.1;locus_tag=MK542_09535;product=CPBP family intramembrane metalloprotease;protein_id=MCY7218385.1;transl_table=11 JAKUZA010000068.1 Genbank gene 12831 13307 . - . ID=gene-MK542_09540;Name=MK542_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09540 JAKUZA010000068.1 Protein Homology CDS 12831 13307 . - 0 ID=cds-MCY7218386.1;Parent=gene-MK542_09540;Dbxref=NCBI_GP:MCY7218386.1;Name=MCY7218386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591816.1;locus_tag=MK542_09540;product=hypothetical protein;protein_id=MCY7218386.1;transl_table=11 JAKUZA010000068.1 Genbank gene 13352 13846 . - . ID=gene-MK542_09545;Name=MK542_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09545 JAKUZA010000068.1 Protein Homology CDS 13352 13846 . - 0 ID=cds-MCY7218387.1;Parent=gene-MK542_09545;Dbxref=NCBI_GP:MCY7218387.1;Name=MCY7218387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591815.1;locus_tag=MK542_09545;product=hypothetical protein;protein_id=MCY7218387.1;transl_table=11 JAKUZA010000068.1 Genbank gene 13866 14063 . - . ID=gene-MK542_09550;Name=MK542_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09550 JAKUZA010000068.1 Protein Homology CDS 13866 14063 . - 0 ID=cds-MCY7218388.1;Parent=gene-MK542_09550;Dbxref=NCBI_GP:MCY7218388.1;Name=MCY7218388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900995.1;locus_tag=MK542_09550;product=helix-turn-helix transcriptional regulator;protein_id=MCY7218388.1;transl_table=11 JAKUZA010000068.1 Genbank gene 14047 14247 . - . ID=gene-MK542_09555;Name=MK542_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09555 JAKUZA010000068.1 Protein Homology CDS 14047 14247 . - 0 ID=cds-MCY7218389.1;Parent=gene-MK542_09555;Dbxref=NCBI_GP:MCY7218389.1;Name=MCY7218389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591813.1;locus_tag=MK542_09555;product=potassium transporter;protein_id=MCY7218389.1;transl_table=11 JAKUZA010000068.1 Genbank gene 14517 15161 . - . ID=gene-MK542_09560;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=MK542_09560 JAKUZA010000068.1 Protein Homology CDS 14517 15161 . - 0 ID=cds-MCY7218390.1;Parent=gene-MK542_09560;Dbxref=NCBI_GP:MCY7218390.1;Name=MCY7218390.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657835.1;locus_tag=MK542_09560;product=fructose-6-phosphate aldolase;protein_id=MCY7218390.1;transl_table=11 ##sequence-region JAKUZA010000069.1 1 14452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000069.1 Genbank region 1 14452 . + . ID=JAKUZA010000069.1:1..14452;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000069.1 Genbank gene 79 1089 . - . ID=gene-MK542_09565;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=MK542_09565 JAKUZA010000069.1 Protein Homology CDS 79 1089 . - 0 ID=cds-MCY7218391.1;Parent=gene-MK542_09565;Dbxref=NCBI_GP:MCY7218391.1;Name=MCY7218391.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=MK542_09565;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MCY7218391.1;transl_table=11 JAKUZA010000069.1 Genbank gene 1578 3659 . - . ID=gene-MK542_09570;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=MK542_09570 JAKUZA010000069.1 Protein Homology CDS 1578 3659 . - 0 ID=cds-MCY7218392.1;Parent=gene-MK542_09570;Dbxref=NCBI_GP:MCY7218392.1;Name=MCY7218392.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374688.1;locus_tag=MK542_09570;product=elongation factor G;protein_id=MCY7218392.1;transl_table=11 JAKUZA010000069.1 Genbank gene 4081 4551 . - . ID=gene-MK542_09575;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=MK542_09575 JAKUZA010000069.1 Protein Homology CDS 4081 4551 . - 0 ID=cds-MCY7218393.1;Parent=gene-MK542_09575;Dbxref=NCBI_GP:MCY7218393.1;Name=MCY7218393.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=MK542_09575;product=30S ribosomal protein S7;protein_id=MCY7218393.1;transl_table=11 JAKUZA010000069.1 Genbank gene 4571 4984 . - . ID=gene-MK542_09580;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=MK542_09580 JAKUZA010000069.1 Protein Homology CDS 4571 4984 . - 0 ID=cds-MCY7218394.1;Parent=gene-MK542_09580;Dbxref=NCBI_GP:MCY7218394.1;Name=MCY7218394.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=MK542_09580;product=30S ribosomal protein S12;protein_id=MCY7218394.1;transl_table=11 JAKUZA010000069.1 Genbank gene 5373 5969 . - . ID=gene-MK542_09585;Name=MK542_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09585 JAKUZA010000069.1 Protein Homology CDS 5373 5969 . - 0 ID=cds-MCY7218395.1;Parent=gene-MK542_09585;Dbxref=NCBI_GP:MCY7218395.1;Name=MCY7218395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605813.1;locus_tag=MK542_09585;product=hypothetical protein;protein_id=MCY7218395.1;transl_table=11 JAKUZA010000069.1 Genbank gene 5979 6800 . - . ID=gene-MK542_09590;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=MK542_09590 JAKUZA010000069.1 Protein Homology CDS 5979 6800 . - 0 ID=cds-MCY7218396.1;Parent=gene-MK542_09590;Dbxref=NCBI_GP:MCY7218396.1;Name=MCY7218396.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of transcription%2C DNA-templated|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595527.1;locus_tag=MK542_09590;product=pur operon repressor;protein_id=MCY7218396.1;transl_table=11 JAKUZA010000069.1 Genbank gene 7019 7963 . - . ID=gene-MK542_09595;Name=MK542_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09595 JAKUZA010000069.1 Protein Homology CDS 7019 7963 . - 0 ID=cds-MCY7218397.1;Parent=gene-MK542_09595;Dbxref=NCBI_GP:MCY7218397.1;Name=MCY7218397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184302.1;locus_tag=MK542_09595;product=3'-5' exoribonuclease YhaM family protein;protein_id=MCY7218397.1;transl_table=11 JAKUZA010000069.1 Genbank gene 7953 9209 . - . ID=gene-MK542_09600;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=MK542_09600 JAKUZA010000069.1 Protein Homology CDS 7953 9209 . - 0 ID=cds-MCY7218398.1;Parent=gene-MK542_09600;Dbxref=NCBI_GP:MCY7218398.1;Name=MCY7218398.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907922.1;locus_tag=MK542_09600;product=DNA recombination protein RmuC;protein_id=MCY7218398.1;transl_table=11 JAKUZA010000069.1 Genbank gene 9211 9843 . - . ID=gene-MK542_09605;Name=MK542_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09605 JAKUZA010000069.1 Protein Homology CDS 9211 9843 . - 0 ID=cds-MCY7218399.1;Parent=gene-MK542_09605;Dbxref=NCBI_GP:MCY7218399.1;Name=MCY7218399.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928038.1;locus_tag=MK542_09605;product=thiamine diphosphokinase;protein_id=MCY7218399.1;transl_table=11 JAKUZA010000069.1 Genbank gene 9836 10495 . - . ID=gene-MK542_09610;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=MK542_09610 JAKUZA010000069.1 Protein Homology CDS 9836 10495 . - 0 ID=cds-MCY7218400.1;Parent=gene-MK542_09610;Dbxref=NCBI_GP:MCY7218400.1;Name=MCY7218400.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591652.1;locus_tag=MK542_09610;product=ribulose-phosphate 3-epimerase;protein_id=MCY7218400.1;transl_table=11 JAKUZA010000069.1 Genbank gene 10515 11387 . - . ID=gene-MK542_09615;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=MK542_09615 JAKUZA010000069.1 Protein Homology CDS 10515 11387 . - 0 ID=cds-MCY7218401.1;Parent=gene-MK542_09615;Dbxref=NCBI_GP:MCY7218401.1;Name=MCY7218401.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591651.1;locus_tag=MK542_09615;product=ribosome small subunit-dependent GTPase A;protein_id=MCY7218401.1;transl_table=11 JAKUZA010000069.1 Genbank gene 11489 11571 . + . ID=gene-MK542_09620;Name=MK542_09620;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_09620 JAKUZA010000069.1 tRNAscan-SE tRNA 11489 11571 . + . ID=rna-MK542_09620;Parent=gene-MK542_09620;anticodon=(pos:11522..11524);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09620;product=tRNA-Leu JAKUZA010000069.1 tRNAscan-SE exon 11489 11571 . + . ID=exon-MK542_09620-1;Parent=rna-MK542_09620;anticodon=(pos:11522..11524);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09620;product=tRNA-Leu JAKUZA010000069.1 Genbank gene 11689 12561 . - . ID=gene-MK542_09625;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=MK542_09625 JAKUZA010000069.1 Protein Homology CDS 11689 12561 . - 0 ID=cds-MCY7218402.1;Parent=gene-MK542_09625;Dbxref=NCBI_GP:MCY7218402.1;Name=MCY7218402.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519622.1;locus_tag=MK542_09625;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=MCY7218402.1;transl_table=11 JAKUZA010000069.1 Genbank gene 12700 14452 . - . ID=gene-MK542_09630;Name=MK542_09630;end_range=14452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09630;partial=true JAKUZA010000069.1 Protein Homology CDS 12700 14452 . - 1 ID=cds-MCY7218403.1;Parent=gene-MK542_09630;Dbxref=NCBI_GP:MCY7218403.1;Name=MCY7218403.1;end_range=14452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926177.1;locus_tag=MK542_09630;partial=true;product=DUF2971 domain-containing protein;protein_id=MCY7218403.1;transl_table=11 ##sequence-region JAKUZA010000006.1 1 35411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000006.1 Genbank region 1 35411 . + . ID=JAKUZA010000006.1:1..35411;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000006.1 Genbank gene 177 1094 . + . ID=gene-MK542_00475;Name=MK542_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00475 JAKUZA010000006.1 Protein Homology CDS 177 1094 . + 0 ID=cds-MCY7216654.1;Parent=gene-MK542_00475;Dbxref=NCBI_GP:MCY7216654.1;Name=MCY7216654.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030066.1;locus_tag=MK542_00475;product=IS1595 family transposase;protein_id=MCY7216654.1;transl_table=11 JAKUZA010000006.1 Genbank gene 1084 1539 . + . ID=gene-MK542_00480;Name=MK542_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00480 JAKUZA010000006.1 Protein Homology CDS 1084 1539 . + 0 ID=cds-MCY7216655.1;Parent=gene-MK542_00480;Dbxref=NCBI_GP:MCY7216655.1;Name=MCY7216655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035667.1;locus_tag=MK542_00480;product=hypothetical protein;protein_id=MCY7216655.1;transl_table=11 JAKUZA010000006.1 Genbank gene 1542 1829 . + . ID=gene-MK542_00485;Name=MK542_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00485 JAKUZA010000006.1 Protein Homology CDS 1542 1829 . + 0 ID=cds-MCY7216656.1;Parent=gene-MK542_00485;Dbxref=NCBI_GP:MCY7216656.1;Name=MCY7216656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012515451.1;locus_tag=MK542_00485;product=hypothetical protein;protein_id=MCY7216656.1;transl_table=11 JAKUZA010000006.1 Genbank gene 1822 2364 . + . ID=gene-MK542_00490;Name=MK542_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00490 JAKUZA010000006.1 Protein Homology CDS 1822 2364 . + 0 ID=cds-MCY7216657.1;Parent=gene-MK542_00490;Dbxref=NCBI_GP:MCY7216657.1;Name=MCY7216657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738598.1;locus_tag=MK542_00490;product=DUF6036 family nucleotidyltransferase;protein_id=MCY7216657.1;transl_table=11 JAKUZA010000006.1 Genbank gene 2493 2867 . + . ID=gene-MK542_00495;Name=MK542_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00495 JAKUZA010000006.1 Protein Homology CDS 2493 2867 . + 0 ID=cds-MCY7216658.1;Parent=gene-MK542_00495;Dbxref=NCBI_GP:MCY7216658.1;Name=MCY7216658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899769.1;locus_tag=MK542_00495;product=hypothetical protein;protein_id=MCY7216658.1;transl_table=11 JAKUZA010000006.1 Genbank gene 2986 3750 . + . ID=gene-MK542_00500;Name=MK542_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00500 JAKUZA010000006.1 Protein Homology CDS 2986 3750 . + 0 ID=cds-MCY7216659.1;Parent=gene-MK542_00500;Dbxref=NCBI_GP:MCY7216659.1;Name=MCY7216659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837344.1;locus_tag=MK542_00500;product=class I SAM-dependent methyltransferase;protein_id=MCY7216659.1;transl_table=11 JAKUZA010000006.1 Genbank gene 3948 4502 . - . ID=gene-MK542_00505;Name=MK542_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00505 JAKUZA010000006.1 Protein Homology CDS 3948 4502 . - 0 ID=cds-MCY7216660.1;Parent=gene-MK542_00505;Dbxref=NCBI_GP:MCY7216660.1;Name=MCY7216660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809581.1;locus_tag=MK542_00505;product=class I SAM-dependent methyltransferase;protein_id=MCY7216660.1;transl_table=11 JAKUZA010000006.1 Genbank gene 4496 5443 . - . ID=gene-MK542_00510;Name=MK542_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00510 JAKUZA010000006.1 Protein Homology CDS 4496 5443 . - 0 ID=cds-MCY7216661.1;Parent=gene-MK542_00510;Dbxref=NCBI_GP:MCY7216661.1;Name=MCY7216661.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931375.1;locus_tag=MK542_00510;product=TIGR01212 family radical SAM protein;protein_id=MCY7216661.1;transl_table=11 JAKUZA010000006.1 Genbank gene 5503 5802 . - . ID=gene-MK542_00515;Name=MK542_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00515 JAKUZA010000006.1 Protein Homology CDS 5503 5802 . - 0 ID=cds-MCY7216662.1;Parent=gene-MK542_00515;Dbxref=NCBI_GP:MCY7216662.1;Name=MCY7216662.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923567.1;locus_tag=MK542_00515;product=MGMT family protein;protein_id=MCY7216662.1;transl_table=11 JAKUZA010000006.1 Genbank gene 5905 6555 . - . ID=gene-MK542_00520;Name=MK542_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00520 JAKUZA010000006.1 Protein Homology CDS 5905 6555 . - 0 ID=cds-MCY7216663.1;Parent=gene-MK542_00520;Dbxref=NCBI_GP:MCY7216663.1;Name=MCY7216663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809584.1;locus_tag=MK542_00520;product=phosphatase PAP2 family protein;protein_id=MCY7216663.1;transl_table=11 JAKUZA010000006.1 Genbank gene 6545 7102 . - . ID=gene-MK542_00525;Name=MK542_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00525 JAKUZA010000006.1 Protein Homology CDS 6545 7102 . - 0 ID=cds-MCY7216664.1;Parent=gene-MK542_00525;Dbxref=NCBI_GP:MCY7216664.1;Name=MCY7216664.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931383.1;locus_tag=MK542_00525;product=ECF transporter S component;protein_id=MCY7216664.1;transl_table=11 JAKUZA010000006.1 cmsearch riboswitch 7248 7466 . - . ID=id-JAKUZA010000006.1:7248..7466;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAKUZA010000006.1 Genbank gene 7549 8058 . - . ID=gene-MK542_00530;Name=MK542_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00530 JAKUZA010000006.1 Protein Homology CDS 7549 8058 . - 0 ID=cds-MCY7216665.1;Parent=gene-MK542_00530;Dbxref=NCBI_GP:MCY7216665.1;Name=MCY7216665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592409.1;locus_tag=MK542_00530;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=MCY7216665.1;transl_table=11 JAKUZA010000006.1 Genbank gene 8419 9768 . + . ID=gene-MK542_00535;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=MK542_00535 JAKUZA010000006.1 Protein Homology CDS 8419 9768 . + 0 ID=cds-MCY7216666.1;Parent=gene-MK542_00535;Dbxref=NCBI_GP:MCY7216666.1;Name=MCY7216666.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595793.1;locus_tag=MK542_00535;product=Trk system potassium transporter TrkA;protein_id=MCY7216666.1;transl_table=11 JAKUZA010000006.1 Genbank gene 9773 11212 . + . ID=gene-MK542_00540;Name=MK542_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00540 JAKUZA010000006.1 Protein Homology CDS 9773 11212 . + 0 ID=cds-MCY7216667.1;Parent=gene-MK542_00540;Dbxref=NCBI_GP:MCY7216667.1;Name=MCY7216667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837354.1;locus_tag=MK542_00540;product=TrkH family potassium uptake protein;protein_id=MCY7216667.1;transl_table=11 JAKUZA010000006.1 Genbank gene 11372 11839 . + . ID=gene-MK542_00545;Name=MK542_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00545 JAKUZA010000006.1 Protein Homology CDS 11372 11839 . + 0 ID=cds-MCY7216668.1;Parent=gene-MK542_00545;Dbxref=NCBI_GP:MCY7216668.1;Name=MCY7216668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919235.1;locus_tag=MK542_00545;product=GNAT family N-acetyltransferase;protein_id=MCY7216668.1;transl_table=11 JAKUZA010000006.1 Genbank gene 12138 13352 . - . ID=gene-MK542_00550;Name=MK542_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00550 JAKUZA010000006.1 Protein Homology CDS 12138 13352 . - 0 ID=cds-MCY7216669.1;Parent=gene-MK542_00550;Dbxref=NCBI_GP:MCY7216669.1;Name=MCY7216669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245385.1;locus_tag=MK542_00550;product=ABC transporter permease;protein_id=MCY7216669.1;transl_table=11 JAKUZA010000006.1 Genbank gene 13349 14242 . - . ID=gene-MK542_00555;Name=MK542_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00555 JAKUZA010000006.1 Protein Homology CDS 13349 14242 . - 0 ID=cds-MCY7216670.1;Parent=gene-MK542_00555;Dbxref=NCBI_GP:MCY7216670.1;Name=MCY7216670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895295.1;locus_tag=MK542_00555;product=ABC transporter ATP-binding protein;protein_id=MCY7216670.1;transl_table=11 JAKUZA010000006.1 Genbank gene 14431 15339 . - . ID=gene-MK542_00560;Name=MK542_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00560 JAKUZA010000006.1 Protein Homology CDS 14431 15339 . - 0 ID=cds-MCY7216671.1;Parent=gene-MK542_00560;Dbxref=NCBI_GP:MCY7216671.1;Name=MCY7216671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809540.1;locus_tag=MK542_00560;product=magnesium transporter CorA family protein;protein_id=MCY7216671.1;transl_table=11 JAKUZA010000006.1 Genbank gene 15714 17258 . - . ID=gene-MK542_00565;Name=MK542_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00565 JAKUZA010000006.1 Protein Homology CDS 15714 17258 . - 0 ID=cds-MCY7216672.1;Parent=gene-MK542_00565;Dbxref=NCBI_GP:MCY7216672.1;Name=MCY7216672.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=MK542_00565;product=peptide chain release factor 3;protein_id=MCY7216672.1;transl_table=11 JAKUZA010000006.1 Genbank gene 17573 18064 . - . ID=gene-MK542_00570;Name=MK542_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00570 JAKUZA010000006.1 Protein Homology CDS 17573 18064 . - 0 ID=cds-MCY7216673.1;Parent=gene-MK542_00570;Dbxref=NCBI_GP:MCY7216673.1;Name=MCY7216673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919258.1;locus_tag=MK542_00570;product=NAD(P)H-dependent oxidoreductase;protein_id=MCY7216673.1;transl_table=11 JAKUZA010000006.1 Genbank gene 18117 18836 . - . ID=gene-MK542_00575;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=MK542_00575 JAKUZA010000006.1 Protein Homology CDS 18117 18836 . - 0 ID=cds-MCY7216674.1;Parent=gene-MK542_00575;Dbxref=NCBI_GP:MCY7216674.1;Name=MCY7216674.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187393.1;locus_tag=MK542_00575;product=acetolactate decarboxylase;protein_id=MCY7216674.1;transl_table=11 JAKUZA010000006.1 Genbank gene 18952 19701 . - . ID=gene-MK542_00580;Name=MK542_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00580 JAKUZA010000006.1 Protein Homology CDS 18952 19701 . - 0 ID=cds-MCY7216675.1;Parent=gene-MK542_00580;Dbxref=NCBI_GP:MCY7216675.1;Name=MCY7216675.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014835006.1;locus_tag=MK542_00580;product=PHP domain-containing protein;protein_id=MCY7216675.1;transl_table=11 JAKUZA010000006.1 Genbank gene 19735 20049 . - . ID=gene-MK542_00585;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=MK542_00585 JAKUZA010000006.1 Protein Homology CDS 19735 20049 . - 0 ID=cds-MCY7216676.1;Parent=gene-MK542_00585;Dbxref=NCBI_GP:MCY7216676.1;Name=MCY7216676.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;gene=hisE;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019769248.1;locus_tag=MK542_00585;product=phosphoribosyl-ATP diphosphatase;protein_id=MCY7216676.1;transl_table=11 JAKUZA010000006.1 Genbank gene 20171 20515 . - . ID=gene-MK542_00590;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=MK542_00590 JAKUZA010000006.1 Protein Homology CDS 20171 20515 . - 0 ID=cds-MCY7216677.1;Parent=gene-MK542_00590;Dbxref=NCBI_GP:MCY7216677.1;Name=MCY7216677.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924251.1;locus_tag=MK542_00590;product=phosphoribosyl-AMP cyclohydrolase;protein_id=MCY7216677.1;transl_table=11 JAKUZA010000006.1 Genbank gene 20515 21273 . - . ID=gene-MK542_00595;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=MK542_00595 JAKUZA010000006.1 Protein Homology CDS 20515 21273 . - 0 ID=cds-MCY7216678.1;Parent=gene-MK542_00595;Dbxref=NCBI_GP:MCY7216678.1;Name=MCY7216678.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019776817.1;locus_tag=MK542_00595;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=MCY7216678.1;transl_table=11 JAKUZA010000006.1 Genbank gene 21276 21998 . - . ID=gene-MK542_00600;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=MK542_00600 JAKUZA010000006.1 Protein Homology CDS 21276 21998 . - 0 ID=cds-MCY7216679.1;Parent=gene-MK542_00600;Dbxref=NCBI_GP:MCY7216679.1;Name=MCY7216679.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003080595.1;locus_tag=MK542_00600;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=MCY7216679.1;transl_table=11 JAKUZA010000006.1 Genbank gene 21976 22599 . - . ID=gene-MK542_00605;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=MK542_00605 JAKUZA010000006.1 Protein Homology CDS 21976 22599 . - 0 ID=cds-MCY7216680.1;Parent=gene-MK542_00605;Dbxref=NCBI_GP:MCY7216680.1;Name=MCY7216680.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019769244.1;locus_tag=MK542_00605;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=MCY7216680.1;transl_table=11 JAKUZA010000006.1 Genbank gene 22632 23216 . - . ID=gene-MK542_00610;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=MK542_00610 JAKUZA010000006.1 Protein Homology CDS 22632 23216 . - 0 ID=cds-MCY7216681.1;Parent=gene-MK542_00610;Dbxref=NCBI_GP:MCY7216681.1;Name=MCY7216681.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837141.1;locus_tag=MK542_00610;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=MCY7216681.1;transl_table=11 JAKUZA010000006.1 Genbank gene 23228 24520 . - . ID=gene-MK542_00615;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=MK542_00615 JAKUZA010000006.1 Protein Homology CDS 23228 24520 . - 0 ID=cds-MCY7216682.1;Parent=gene-MK542_00615;Dbxref=NCBI_GP:MCY7216682.1;Name=MCY7216682.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895133.1;locus_tag=MK542_00615;product=histidinol dehydrogenase;protein_id=MCY7216682.1;transl_table=11 JAKUZA010000006.1 Genbank gene 24517 25161 . - . ID=gene-MK542_00620;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=MK542_00620 JAKUZA010000006.1 Protein Homology CDS 24517 25161 . - 0 ID=cds-MCY7216683.1;Parent=gene-MK542_00620;Dbxref=NCBI_GP:MCY7216683.1;Name=MCY7216683.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909409.1;locus_tag=MK542_00620;product=ATP phosphoribosyltransferase;protein_id=MCY7216683.1;transl_table=11 JAKUZA010000006.1 Genbank gene 25158 26144 . - . ID=gene-MK542_00625;Name=MK542_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00625 JAKUZA010000006.1 Protein Homology CDS 25158 26144 . - 0 ID=cds-MCY7216684.1;Parent=gene-MK542_00625;Dbxref=NCBI_GP:MCY7216684.1;Name=MCY7216684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920870.1;locus_tag=MK542_00625;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=MCY7216684.1;transl_table=11 JAKUZA010000006.1 Genbank gene 26153 27229 . - . ID=gene-MK542_00630;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=MK542_00630 JAKUZA010000006.1 Protein Homology CDS 26153 27229 . - 0 ID=cds-MCY7216685.1;Parent=gene-MK542_00630;Dbxref=NCBI_GP:MCY7216685.1;Name=MCY7216685.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897315.1;locus_tag=MK542_00630;product=histidinol-phosphate transaminase;protein_id=MCY7216685.1;transl_table=11 JAKUZA010000006.1 Genbank gene 27661 27966 . - . ID=gene-MK542_00635;Name=MK542_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00635 JAKUZA010000006.1 Protein Homology CDS 27661 27966 . - 0 ID=cds-MCY7216686.1;Parent=gene-MK542_00635;Dbxref=NCBI_GP:MCY7216686.1;Name=MCY7216686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895127.1;locus_tag=MK542_00635;product=DUF4298 domain-containing protein;protein_id=MCY7216686.1;transl_table=11 JAKUZA010000006.1 Genbank gene 28107 31778 . - . ID=gene-MK542_00640;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=MK542_00640 JAKUZA010000006.1 Protein Homology CDS 28107 31778 . - 0 ID=cds-MCY7216687.1;Parent=gene-MK542_00640;Dbxref=NCBI_GP:MCY7216687.1;Name=MCY7216687.1;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913410.1;locus_tag=MK542_00640;product=helicase-exonuclease AddAB subunit AddA;protein_id=MCY7216687.1;transl_table=11 JAKUZA010000006.1 Genbank gene 31775 35062 . - . ID=gene-MK542_00645;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=MK542_00645 JAKUZA010000006.1 Protein Homology CDS 31775 35062 . - 0 ID=cds-MCY7216688.1;Parent=gene-MK542_00645;Dbxref=NCBI_GP:MCY7216688.1;Name=MCY7216688.1;Ontology_term=GO:0000724;gbkey=CDS;gene=rexB;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130499.1;locus_tag=MK542_00645;product=ATP-dependent nuclease subunit B;protein_id=MCY7216688.1;transl_table=11 JAKUZA010000006.1 Genbank pseudogene 35228 35411 . - . ID=gene-MK542_00650;Name=MK542_00650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00650;pseudo=true JAKUZA010000006.1 Protein Homology CDS 35228 35411 . - 0 ID=cds-MK542_00650;Parent=gene-MK542_00650;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820942.1;locus_tag=MK542_00650;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000070.1 1 6045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000070.1 Genbank region 1 6045 . + . ID=JAKUZA010000070.1:1..6045;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000070.1 Genbank gene 198 836 . + . ID=gene-MK542_09635;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=MK542_09635 JAKUZA010000070.1 Protein Homology CDS 198 836 . + 0 ID=cds-MCY7218404.1;Parent=gene-MK542_09635;Dbxref=NCBI_GP:MCY7218404.1;Name=MCY7218404.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591850.1;locus_tag=MK542_09635;product=dTMP kinase;protein_id=MCY7218404.1;transl_table=11 JAKUZA010000070.1 Genbank gene 833 1726 . + . ID=gene-MK542_09640;Name=MK542_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09640 JAKUZA010000070.1 Protein Homology CDS 833 1726 . + 0 ID=cds-MCY7218405.1;Parent=gene-MK542_09640;Dbxref=NCBI_GP:MCY7218405.1;Name=MCY7218405.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043175.1;locus_tag=MK542_09640;product=DNA polymerase III subunit delta';protein_id=MCY7218405.1;transl_table=11 JAKUZA010000070.1 Genbank gene 1745 2062 . + . ID=gene-MK542_09645;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=MK542_09645 JAKUZA010000070.1 Protein Homology CDS 1745 2062 . + 0 ID=cds-MCY7218406.1;Parent=gene-MK542_09645;Dbxref=NCBI_GP:MCY7218406.1;Name=MCY7218406.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358230.1;locus_tag=MK542_09645;product=DNA replication initiation control protein YabA;protein_id=MCY7218406.1;transl_table=11 JAKUZA010000070.1 Genbank gene 2065 2931 . + . ID=gene-MK542_09650;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=MK542_09650 JAKUZA010000070.1 Protein Homology CDS 2065 2931 . + 0 ID=cds-MCY7218407.1;Parent=gene-MK542_09650;Dbxref=NCBI_GP:MCY7218407.1;Name=MCY7218407.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931303.1;locus_tag=MK542_09650;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=MCY7218407.1;transl_table=11 JAKUZA010000070.1 Genbank gene 3073 4164 . + . ID=gene-MK542_09655;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=MK542_09655 JAKUZA010000070.1 Protein Homology CDS 3073 4164 . + 0 ID=cds-MCY7218408.1;Parent=gene-MK542_09655;Dbxref=NCBI_GP:MCY7218408.1;Name=MCY7218408.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931293.1;locus_tag=MK542_09655;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=MCY7218408.1;transl_table=11 JAKUZA010000070.1 Genbank gene 4177 5352 . + . ID=gene-MK542_09660;Name=MK542_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09660 JAKUZA010000070.1 Protein Homology CDS 4177 5352 . + 0 ID=cds-MCY7218409.1;Parent=gene-MK542_09660;Dbxref=NCBI_GP:MCY7218409.1;Name=MCY7218409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931290.1;locus_tag=MK542_09660;product=3-phosphoglycerate dehydrogenase family protein;protein_id=MCY7218409.1;transl_table=11 JAKUZA010000070.1 Genbank gene 5349 5876 . + . ID=gene-MK542_09665;Name=MK542_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09665 JAKUZA010000070.1 Protein Homology CDS 5349 5876 . + 0 ID=cds-MCY7218410.1;Parent=gene-MK542_09665;Dbxref=NCBI_GP:MCY7218410.1;Name=MCY7218410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078172.1;locus_tag=MK542_09665;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=MCY7218410.1;transl_table=11 JAKUZA010000070.1 Genbank gene 5888 6045 . - . ID=gene-MK542_09670;Name=MK542_09670;end_range=6045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09670;partial=true JAKUZA010000070.1 Protein Homology CDS 5888 6045 . - 2 ID=cds-MCY7218411.1;Parent=gene-MK542_09670;Dbxref=NCBI_GP:MCY7218411.1;Name=MCY7218411.1;end_range=6045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_09670;partial=true;product=IS481 family transposase;protein_id=MCY7218411.1;transl_table=11 ##sequence-region JAKUZA010000071.1 1 8530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000071.1 Genbank region 1 8530 . + . ID=JAKUZA010000071.1:1..8530;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000071.1 Genbank gene 22 768 . - . ID=gene-MK542_09675;Name=MK542_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09675 JAKUZA010000071.1 Protein Homology CDS 22 768 . - 0 ID=cds-MCY7218412.1;Parent=gene-MK542_09675;Dbxref=NCBI_GP:MCY7218412.1;Name=MCY7218412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003697744.1;locus_tag=MK542_09675;product=LicD family protein;protein_id=MCY7218412.1;transl_table=11 JAKUZA010000071.1 Genbank gene 786 2003 . - . ID=gene-MK542_09680;Name=MK542_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09680 JAKUZA010000071.1 Protein Homology CDS 786 2003 . - 0 ID=cds-MCY7218413.1;Parent=gene-MK542_09680;Dbxref=NCBI_GP:MCY7218413.1;Name=MCY7218413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001134524.1;locus_tag=MK542_09680;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=MCY7218413.1;transl_table=11 JAKUZA010000071.1 Genbank gene 2018 2710 . - . ID=gene-MK542_09685;Name=MK542_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09685 JAKUZA010000071.1 Protein Homology CDS 2018 2710 . - 0 ID=cds-MCY7218414.1;Parent=gene-MK542_09685;Dbxref=NCBI_GP:MCY7218414.1;Name=MCY7218414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922225.1;locus_tag=MK542_09685;product=sugar transferase;protein_id=MCY7218414.1;transl_table=11 JAKUZA010000071.1 Genbank gene 2719 4527 . - . ID=gene-MK542_09690;Name=MK542_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09690 JAKUZA010000071.1 Protein Homology CDS 2719 4527 . - 0 ID=cds-MCY7218415.1;Parent=gene-MK542_09690;Dbxref=NCBI_GP:MCY7218415.1;Name=MCY7218415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003077290.1;locus_tag=MK542_09690;product=polysaccharide biosynthesis protein;protein_id=MCY7218415.1;transl_table=11 JAKUZA010000071.1 Genbank gene 4550 5260 . - . ID=gene-MK542_09695;Name=MK542_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09695 JAKUZA010000071.1 Protein Homology CDS 4550 5260 . - 0 ID=cds-MCY7218416.1;Parent=gene-MK542_09695;Dbxref=NCBI_GP:MCY7218416.1;Name=MCY7218416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754847.1;locus_tag=MK542_09695;product=tyrosine-protein kinase;protein_id=MCY7218416.1;transl_table=11 JAKUZA010000071.1 Genbank gene 5270 5965 . - . ID=gene-MK542_09700;Name=MK542_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09700 JAKUZA010000071.1 Protein Homology CDS 5270 5965 . - 0 ID=cds-MCY7218417.1;Parent=gene-MK542_09700;Dbxref=NCBI_GP:MCY7218417.1;Name=MCY7218417.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371417.1;locus_tag=MK542_09700;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=MCY7218417.1;transl_table=11 JAKUZA010000071.1 Genbank gene 6028 6759 . - . ID=gene-MK542_09705;Name=MK542_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09705 JAKUZA010000071.1 Protein Homology CDS 6028 6759 . - 0 ID=cds-MCY7218418.1;Parent=gene-MK542_09705;Dbxref=NCBI_GP:MCY7218418.1;Name=MCY7218418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899257.1;locus_tag=MK542_09705;product=tyrosine protein phosphatase;protein_id=MCY7218418.1;transl_table=11 JAKUZA010000071.1 Genbank gene 6763 8214 . - . ID=gene-MK542_09710;Name=MK542_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09710 JAKUZA010000071.1 Protein Homology CDS 6763 8214 . - 0 ID=cds-MCY7218419.1;Parent=gene-MK542_09710;Dbxref=NCBI_GP:MCY7218419.1;Name=MCY7218419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026608.1;locus_tag=MK542_09710;product=LCP family protein;protein_id=MCY7218419.1;transl_table=11 JAKUZA010000071.1 Genbank gene 8373 8530 . - . ID=gene-MK542_09715;Name=MK542_09715;end_range=8530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09715;partial=true JAKUZA010000071.1 Protein Homology CDS 8373 8530 . - 2 ID=cds-MCY7218420.1;Parent=gene-MK542_09715;Dbxref=NCBI_GP:MCY7218420.1;Name=MCY7218420.1;end_range=8530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_09715;partial=true;product=IS481 family transposase;protein_id=MCY7218420.1;transl_table=11 ##sequence-region JAKUZA010000072.1 1 5035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000072.1 Genbank region 1 5035 . + . ID=JAKUZA010000072.1:1..5035;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000072.1 Genbank pseudogene 1 467 . + . ID=gene-MK542_09720;Name=MK542_09720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_09720;pseudo=true JAKUZA010000072.1 Protein Homology CDS 1 467 . + 2 ID=cds-MK542_09720;Parent=gene-MK542_09720;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268143.1;locus_tag=MK542_09720;product=transposase;pseudo=true;transl_table=11 JAKUZA010000072.1 Genbank gene 740 1942 . + . ID=gene-MK542_09725;Name=MK542_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09725 JAKUZA010000072.1 Protein Homology CDS 740 1942 . + 0 ID=cds-MCY7218421.1;Parent=gene-MK542_09725;Dbxref=NCBI_GP:MCY7218421.1;Name=MCY7218421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887295.1;locus_tag=MK542_09725;product=IS110 family transposase;protein_id=MCY7218421.1;transl_table=11 JAKUZA010000072.1 Genbank gene 2127 3332 . - . ID=gene-MK542_09730;Name=MK542_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09730 JAKUZA010000072.1 Protein Homology CDS 2127 3332 . - 0 ID=cds-MCY7218422.1;Parent=gene-MK542_09730;Dbxref=NCBI_GP:MCY7218422.1;Name=MCY7218422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040856.1;locus_tag=MK542_09730;product=CHAP domain-containing protein;protein_id=MCY7218422.1;transl_table=11 JAKUZA010000072.1 Genbank gene 3429 3929 . - . ID=gene-MK542_09735;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=MK542_09735 JAKUZA010000072.1 Protein Homology CDS 3429 3929 . - 0 ID=cds-MCY7218423.1;Parent=gene-MK542_09735;Dbxref=NCBI_GP:MCY7218423.1;Name=MCY7218423.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185019.1;locus_tag=MK542_09735;product=rod shape-determining protein MreD;protein_id=MCY7218423.1;transl_table=11 JAKUZA010000072.1 Genbank gene 3931 4746 . - . ID=gene-MK542_09740;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=MK542_09740 JAKUZA010000072.1 Protein Homology CDS 3931 4746 . - 0 ID=cds-MCY7218424.1;Parent=gene-MK542_09740;Dbxref=NCBI_GP:MCY7218424.1;Name=MCY7218424.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185016.1;locus_tag=MK542_09740;product=rod shape-determining protein MreC;protein_id=MCY7218424.1;transl_table=11 JAKUZA010000072.1 Genbank gene 4913 5000 . - . ID=gene-MK542_09745;Name=MK542_09745;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_09745 JAKUZA010000072.1 tRNAscan-SE tRNA 4913 5000 . - . ID=rna-MK542_09745;Parent=gene-MK542_09745;anticodon=(pos:complement(4964..4966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09745;product=tRNA-Ser JAKUZA010000072.1 tRNAscan-SE exon 4913 5000 . - . ID=exon-MK542_09745-1;Parent=rna-MK542_09745;anticodon=(pos:complement(4964..4966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09745;product=tRNA-Ser ##sequence-region JAKUZA010000073.1 1 6636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000073.1 Genbank region 1 6636 . + . ID=JAKUZA010000073.1:1..6636;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000073.1 Genbank gene 98 168 . + . ID=gene-MK542_09750;Name=MK542_09750;gbkey=Gene;gene_biotype=tRNA;locus_tag=MK542_09750 JAKUZA010000073.1 tRNAscan-SE tRNA 98 168 . + . ID=rna-MK542_09750;Parent=gene-MK542_09750;anticodon=(pos:130..132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09750;product=tRNA-Cys JAKUZA010000073.1 tRNAscan-SE exon 98 168 . + . ID=exon-MK542_09750-1;Parent=rna-MK542_09750;anticodon=(pos:130..132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=MK542_09750;product=tRNA-Cys JAKUZA010000073.1 Genbank gene 424 1203 . - . ID=gene-MK542_09755;Name=MK542_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09755 JAKUZA010000073.1 Protein Homology CDS 424 1203 . - 0 ID=cds-MCY7218425.1;Parent=gene-MK542_09755;Dbxref=NCBI_GP:MCY7218425.1;Name=MCY7218425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006269131.1;locus_tag=MK542_09755;product=hypothetical protein;protein_id=MCY7218425.1;transl_table=11 JAKUZA010000073.1 Genbank gene 1409 1945 . - . ID=gene-MK542_09760;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=MK542_09760 JAKUZA010000073.1 Protein Homology CDS 1409 1945 . - 0 ID=cds-MCY7218426.1;Parent=gene-MK542_09760;Dbxref=NCBI_GP:MCY7218426.1;Name=MCY7218426.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376740.1;locus_tag=MK542_09760;product=transcription termination/antitermination protein NusG;protein_id=MCY7218426.1;transl_table=11 JAKUZA010000073.1 Genbank gene 2087 2266 . - . ID=gene-MK542_09765;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=MK542_09765 JAKUZA010000073.1 Protein Homology CDS 2087 2266 . - 0 ID=cds-MCY7218427.1;Parent=gene-MK542_09765;Dbxref=NCBI_GP:MCY7218427.1;Name=MCY7218427.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secE;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894022.1;locus_tag=MK542_09765;product=preprotein translocase subunit SecE;protein_id=MCY7218427.1;transl_table=11 JAKUZA010000073.1 Genbank gene 2276 2428 . - . ID=gene-MK542_09770;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=MK542_09770 JAKUZA010000073.1 Protein Homology CDS 2276 2428 . - 0 ID=cds-MCY7218428.1;Parent=gene-MK542_09770;Dbxref=NCBI_GP:MCY7218428.1;Name=MCY7218428.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912025.1;locus_tag=MK542_09770;product=50S ribosomal protein L33;protein_id=MCY7218428.1;transl_table=11 JAKUZA010000073.1 Genbank gene 2489 4711 . - . ID=gene-MK542_09775;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=MK542_09775 JAKUZA010000073.1 Protein Homology CDS 2489 4711 . - 0 ID=cds-MCY7218429.1;Parent=gene-MK542_09775;Dbxref=NCBI_GP:MCY7218429.1;Name=MCY7218429.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926340.1;locus_tag=MK542_09775;product=penicillin-binding protein PBP2A;protein_id=MCY7218429.1;transl_table=11 JAKUZA010000073.1 Genbank gene 4863 5750 . + . ID=gene-MK542_09780;Name=MK542_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09780 JAKUZA010000073.1 Protein Homology CDS 4863 5750 . + 0 ID=cds-MCY7218430.1;Parent=gene-MK542_09780;Dbxref=NCBI_GP:MCY7218430.1;Name=MCY7218430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591542.1;locus_tag=MK542_09780;product=RluA family pseudouridine synthase;protein_id=MCY7218430.1;transl_table=11 JAKUZA010000073.1 Genbank gene 5911 6132 . - . ID=gene-MK542_09785;Name=comW;gbkey=Gene;gene=comW;gene_biotype=protein_coding;locus_tag=MK542_09785 JAKUZA010000073.1 Protein Homology CDS 5911 6132 . - 0 ID=cds-MCY7218431.1;Parent=gene-MK542_09785;Dbxref=NCBI_GP:MCY7218431.1;Name=MCY7218431.1;gbkey=CDS;gene=comW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040495.1;locus_tag=MK542_09785;product=sigma(X)-activator ComW;protein_id=MCY7218431.1;transl_table=11 ##sequence-region JAKUZA010000074.1 1 1837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000074.1 Genbank region 1 1837 . + . ID=JAKUZA010000074.1:1..1837;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000074.1 Genbank gene 234 1214 . - . ID=gene-MK542_09790;Name=MK542_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09790 JAKUZA010000074.1 Protein Homology CDS 234 1214 . - 0 ID=cds-MCY7218432.1;Parent=gene-MK542_09790;Dbxref=NCBI_GP:MCY7218432.1;Name=MCY7218432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591935.1;locus_tag=MK542_09790;product=DUF1002 domain-containing protein;protein_id=MCY7218432.1;transl_table=11 ##sequence-region JAKUZA010000075.1 1 1768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000075.1 Genbank region 1 1768 . + . ID=JAKUZA010000075.1:1..1768;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000075.1 Genbank gene 108 1445 . + . ID=gene-MK542_09795;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=MK542_09795 JAKUZA010000075.1 Protein Homology CDS 108 1445 . + 0 ID=cds-MCY7218433.1;Parent=gene-MK542_09795;Dbxref=NCBI_GP:MCY7218433.1;Name=MCY7218433.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607929.1;locus_tag=MK542_09795;product=aminopeptidase C;protein_id=MCY7218433.1;transl_table=11 JAKUZA010000075.1 Genbank gene 1649 1768 . - . ID=gene-MK542_09800;Name=MK542_09800;end_range=1768,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09800;partial=true JAKUZA010000075.1 Protein Homology CDS 1649 1768 . - 0 ID=cds-MCY7218434.1;Parent=gene-MK542_09800;Dbxref=NCBI_GP:MCY7218434.1;Name=MCY7218434.1;end_range=1768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=MK542_09800;partial=true;product=transposase;protein_id=MCY7218434.1;transl_table=11 ##sequence-region JAKUZA010000076.1 1 6627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000076.1 Genbank region 1 6627 . + . ID=JAKUZA010000076.1:1..6627;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000076.1 Genbank gene 107 1105 . - . ID=gene-MK542_09805;Name=MK542_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09805 JAKUZA010000076.1 Protein Homology CDS 107 1105 . - 0 ID=cds-MCY7218435.1;Parent=gene-MK542_09805;Dbxref=NCBI_GP:MCY7218435.1;Name=MCY7218435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604209.1;locus_tag=MK542_09805;product=acetylxylan esterase;protein_id=MCY7218435.1;transl_table=11 JAKUZA010000076.1 Genbank gene 1332 3047 . - . ID=gene-MK542_09810;Name=MK542_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09810 JAKUZA010000076.1 Protein Homology CDS 1332 3047 . - 0 ID=cds-MCY7218436.1;Parent=gene-MK542_09810;Dbxref=NCBI_GP:MCY7218436.1;Name=MCY7218436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636189.1;locus_tag=MK542_09810;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7218436.1;transl_table=11 JAKUZA010000076.1 Genbank gene 3066 3815 . - . ID=gene-MK542_09815;Name=MK542_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09815 JAKUZA010000076.1 Protein Homology CDS 3066 3815 . - 0 ID=cds-MCY7218437.1;Parent=gene-MK542_09815;Dbxref=NCBI_GP:MCY7218437.1;Name=MCY7218437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024141.2;locus_tag=MK542_09815;product=ABC transporter permease;protein_id=MCY7218437.1;transl_table=11 JAKUZA010000076.1 Genbank gene 3827 4696 . - . ID=gene-MK542_09820;Name=MK542_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09820 JAKUZA010000076.1 Protein Homology CDS 3827 4696 . - 0 ID=cds-MCY7218438.1;Parent=gene-MK542_09820;Dbxref=NCBI_GP:MCY7218438.1;Name=MCY7218438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=MK542_09820;product=ATP-binding cassette domain-containing protein;protein_id=MCY7218438.1;transl_table=11 JAKUZA010000076.1 Genbank gene 5565 6479 . - . ID=gene-MK542_09825;Name=MK542_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09825 JAKUZA010000076.1 Protein Homology CDS 5565 6479 . - 0 ID=cds-MCY7218439.1;Parent=gene-MK542_09825;Dbxref=NCBI_GP:MCY7218439.1;Name=MCY7218439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730766.1;locus_tag=MK542_09825;product=helix-turn-helix domain-containing protein;protein_id=MCY7218439.1;transl_table=11 ##sequence-region JAKUZA010000077.1 1 4927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000077.1 Genbank region 1 4927 . + . ID=JAKUZA010000077.1:1..4927;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000077.1 Genbank gene 255 797 . - . ID=gene-MK542_09830;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=MK542_09830 JAKUZA010000077.1 Protein Homology CDS 255 797 . - 0 ID=cds-MCY7218440.1;Parent=gene-MK542_09830;Dbxref=NCBI_GP:MCY7218440.1;Name=MCY7218440.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591895.1;locus_tag=MK542_09830;product=ribosome-associated translation inhibitor RaiA;protein_id=MCY7218440.1;transl_table=11 JAKUZA010000077.1 Genbank gene 879 1544 . - . ID=gene-MK542_09835;Name=MK542_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09835 JAKUZA010000077.1 Protein Homology CDS 879 1544 . - 0 ID=cds-MCY7218441.1;Parent=gene-MK542_09835;Dbxref=NCBI_GP:MCY7218441.1;Name=MCY7218441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893482.1;locus_tag=MK542_09835;product=ComF family protein;protein_id=MCY7218441.1;transl_table=11 JAKUZA010000077.1 Genbank gene 1541 2842 . - . ID=gene-MK542_09840;Name=MK542_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09840 JAKUZA010000077.1 Protein Homology CDS 1541 2842 . - 0 ID=cds-MCY7218442.1;Parent=gene-MK542_09840;Dbxref=NCBI_GP:MCY7218442.1;Name=MCY7218442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908182.1;locus_tag=MK542_09840;product=DEAD/DEAH box helicase;protein_id=MCY7218442.1;transl_table=11 JAKUZA010000077.1 Genbank gene 2899 3534 . + . ID=gene-MK542_09845;Name=MK542_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09845 JAKUZA010000077.1 Protein Homology CDS 2899 3534 . + 0 ID=cds-MCY7218443.1;Parent=gene-MK542_09845;Dbxref=NCBI_GP:MCY7218443.1;Name=MCY7218443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591892.1;locus_tag=MK542_09845;product=YigZ family protein;protein_id=MCY7218443.1;transl_table=11 JAKUZA010000077.1 Genbank gene 3652 4581 . + . ID=gene-MK542_09850;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=MK542_09850 JAKUZA010000077.1 Protein Homology CDS 3652 4581 . + 0 ID=cds-MCY7218444.1;Parent=gene-MK542_09850;Dbxref=NCBI_GP:MCY7218444.1;Name=MCY7218444.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920045.1;locus_tag=MK542_09850;product=cysteine synthase A;protein_id=MCY7218444.1;transl_table=11 JAKUZA010000077.1 Genbank gene 4578 4763 . - . ID=gene-MK542_09855;Name=MK542_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09855 JAKUZA010000077.1 Protein Homology CDS 4578 4763 . - 0 ID=cds-MCY7218445.1;Parent=gene-MK542_09855;Dbxref=NCBI_GP:MCY7218445.1;Name=MCY7218445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018372324.1;locus_tag=MK542_09855;product=hypothetical protein;protein_id=MCY7218445.1;transl_table=11 JAKUZA010000077.1 Genbank gene 4724 4927 . + . ID=gene-MK542_09860;Name=MK542_09860;end_range=4927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09860;partial=true JAKUZA010000077.1 Protein Homology CDS 4724 4927 . + 0 ID=cds-MCY7218446.1;Parent=gene-MK542_09860;Dbxref=NCBI_GP:MCY7218446.1;Name=MCY7218446.1;end_range=4927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270419.1;locus_tag=MK542_09860;partial=true;product=IS1182 family transposase;protein_id=MCY7218446.1;transl_table=11 ##sequence-region JAKUZA010000078.1 1 13506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000078.1 Genbank region 1 13506 . + . ID=JAKUZA010000078.1:1..13506;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000078.1 Genbank gene 221 1312 . - . ID=gene-MK542_09865;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=MK542_09865 JAKUZA010000078.1 Protein Homology CDS 221 1312 . - 0 ID=cds-MCY7218447.1;Parent=gene-MK542_09865;Dbxref=NCBI_GP:MCY7218447.1;Name=MCY7218447.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894277.1;locus_tag=MK542_09865;product=DNA replication/repair protein RecF;protein_id=MCY7218447.1;transl_table=11 JAKUZA010000078.1 Genbank gene 1316 1705 . - . ID=gene-MK542_09870;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=MK542_09870 JAKUZA010000078.1 Protein Homology CDS 1316 1705 . - 0 ID=cds-MCY7218448.1;Parent=gene-MK542_09870;Dbxref=NCBI_GP:MCY7218448.1;Name=MCY7218448.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003095203.1;locus_tag=MK542_09870;product=S4 domain-containing protein YaaA;protein_id=MCY7218448.1;transl_table=11 JAKUZA010000078.1 Genbank gene 1878 3137 . + . ID=gene-MK542_09875;Name=MK542_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09875 JAKUZA010000078.1 Protein Homology CDS 1878 3137 . + 0 ID=cds-MCY7218449.1;Parent=gene-MK542_09875;Dbxref=NCBI_GP:MCY7218449.1;Name=MCY7218449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837723.1;locus_tag=MK542_09875;product=insulinase family protein;protein_id=MCY7218449.1;transl_table=11 JAKUZA010000078.1 Genbank gene 3137 4432 . + . ID=gene-MK542_09880;Name=MK542_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09880 JAKUZA010000078.1 Protein Homology CDS 3137 4432 . + 0 ID=cds-MCY7218450.1;Parent=gene-MK542_09880;Dbxref=NCBI_GP:MCY7218450.1;Name=MCY7218450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837722.1;locus_tag=MK542_09880;product=insulinase family protein;protein_id=MCY7218450.1;transl_table=11 JAKUZA010000078.1 Genbank gene 4492 5316 . + . ID=gene-MK542_09885;Name=MK542_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09885 JAKUZA010000078.1 Protein Homology CDS 4492 5316 . + 0 ID=cds-MCY7218451.1;Parent=gene-MK542_09885;Dbxref=NCBI_GP:MCY7218451.1;Name=MCY7218451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659573.1;locus_tag=MK542_09885;product=helix-turn-helix domain-containing protein;protein_id=MCY7218451.1;transl_table=11 JAKUZA010000078.1 Genbank gene 5327 5866 . + . ID=gene-MK542_09890;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=MK542_09890 JAKUZA010000078.1 Protein Homology CDS 5327 5866 . + 0 ID=cds-MCY7218452.1;Parent=gene-MK542_09890;Dbxref=NCBI_GP:MCY7218452.1;Name=MCY7218452.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592114.1;locus_tag=MK542_09890;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=MCY7218452.1;transl_table=11 JAKUZA010000078.1 Genbank gene 5868 6695 . + . ID=gene-MK542_09895;Name=MK542_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09895 JAKUZA010000078.1 Protein Homology CDS 5868 6695 . + 0 ID=cds-MCY7218453.1;Parent=gene-MK542_09895;Dbxref=NCBI_GP:MCY7218453.1;Name=MCY7218453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040763.1;locus_tag=MK542_09895;product=energy-coupling factor transporter ATPase;protein_id=MCY7218453.1;transl_table=11 JAKUZA010000078.1 Genbank gene 6680 7519 . + . ID=gene-MK542_09900;Name=MK542_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09900 JAKUZA010000078.1 Protein Homology CDS 6680 7519 . + 0 ID=cds-MCY7218454.1;Parent=gene-MK542_09900;Dbxref=NCBI_GP:MCY7218454.1;Name=MCY7218454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837718.1;locus_tag=MK542_09900;product=energy-coupling factor transporter ATPase;protein_id=MCY7218454.1;transl_table=11 JAKUZA010000078.1 Genbank gene 7512 8309 . + . ID=gene-MK542_09905;Name=MK542_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09905 JAKUZA010000078.1 Protein Homology CDS 7512 8309 . + 0 ID=cds-MCY7218455.1;Parent=gene-MK542_09905;Dbxref=NCBI_GP:MCY7218455.1;Name=MCY7218455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018363628.1;locus_tag=MK542_09905;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=MCY7218455.1;transl_table=11 JAKUZA010000078.1 Genbank gene 8516 9136 . + . ID=gene-MK542_09910;Name=MK542_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09910 JAKUZA010000078.1 Protein Homology CDS 8516 9136 . + 0 ID=cds-MCY7218456.1;Parent=gene-MK542_09910;Dbxref=NCBI_GP:MCY7218456.1;Name=MCY7218456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659542.1;locus_tag=MK542_09910;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MCY7218456.1;transl_table=11 JAKUZA010000078.1 Genbank gene 9204 10076 . - . ID=gene-MK542_09915;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=MK542_09915 JAKUZA010000078.1 Protein Homology CDS 9204 10076 . - 0 ID=cds-MCY7218457.1;Parent=gene-MK542_09915;Dbxref=NCBI_GP:MCY7218457.1;Name=MCY7218457.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500050.1;locus_tag=MK542_09915;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MCY7218457.1;transl_table=11 JAKUZA010000078.1 Genbank gene 10085 10756 . - . ID=gene-MK542_09920;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=MK542_09920 JAKUZA010000078.1 Protein Homology CDS 10085 10756 . - 0 ID=cds-MCY7218458.1;Parent=gene-MK542_09920;Dbxref=NCBI_GP:MCY7218458.1;Name=MCY7218458.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606087.1;locus_tag=MK542_09920;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=MCY7218458.1;transl_table=11 JAKUZA010000078.1 Genbank gene 11111 11623 . + . ID=gene-MK542_09925;Name=MK542_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09925 JAKUZA010000078.1 Protein Homology CDS 11111 11623 . + 0 ID=cds-MCY7218459.1;Parent=gene-MK542_09925;Dbxref=NCBI_GP:MCY7218459.1;Name=MCY7218459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027874.1;locus_tag=MK542_09925;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MCY7218459.1;transl_table=11 JAKUZA010000078.1 Genbank gene 11901 13022 . + . ID=gene-MK542_09930;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=MK542_09930 JAKUZA010000078.1 Protein Homology CDS 11901 13022 . + 0 ID=cds-MCY7218460.1;Parent=gene-MK542_09930;Dbxref=NCBI_GP:MCY7218460.1;Name=MCY7218460.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808058.1;locus_tag=MK542_09930;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MCY7218460.1;transl_table=11 JAKUZA010000078.1 Genbank gene 13044 13298 . + . ID=gene-MK542_09935;Name=MK542_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09935 JAKUZA010000078.1 GeneMarkS-2+ CDS 13044 13298 . + 0 ID=cds-MCY7218461.1;Parent=gene-MK542_09935;Dbxref=NCBI_GP:MCY7218461.1;Name=MCY7218461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09935;product=hypothetical protein;protein_id=MCY7218461.1;transl_table=11 JAKUZA010000078.1 Genbank gene 13319 13506 . - . ID=gene-MK542_09940;Name=MK542_09940;end_range=13506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09940;partial=true JAKUZA010000078.1 GeneMarkS-2+ CDS 13319 13506 . - 2 ID=cds-MCY7218462.1;Parent=gene-MK542_09940;Dbxref=NCBI_GP:MCY7218462.1;Name=MCY7218462.1;end_range=13506,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09940;partial=true;product=hypothetical protein;protein_id=MCY7218462.1;transl_table=11 ##sequence-region JAKUZA010000079.1 1 3248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000079.1 Genbank region 1 3248 . + . ID=JAKUZA010000079.1:1..3248;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000079.1 Genbank gene 260 784 . + . ID=gene-MK542_09945;Name=MK542_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09945 JAKUZA010000079.1 Protein Homology CDS 260 784 . + 0 ID=cds-MCY7218463.1;Parent=gene-MK542_09945;Dbxref=NCBI_GP:MCY7218463.1;Name=MCY7218463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119911.1;locus_tag=MK542_09945;product=aromatic acid exporter family protein;protein_id=MCY7218463.1;transl_table=11 JAKUZA010000079.1 Genbank gene 863 1228 . + . ID=gene-MK542_09950;Name=MK542_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09950 JAKUZA010000079.1 Protein Homology CDS 863 1228 . + 0 ID=cds-MCY7218464.1;Parent=gene-MK542_09950;Dbxref=NCBI_GP:MCY7218464.1;Name=MCY7218464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896641.1;locus_tag=MK542_09950;product=MerR family transcriptional regulator;protein_id=MCY7218464.1;transl_table=11 JAKUZA010000079.1 Genbank gene 1264 2610 . + . ID=gene-MK542_09955;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=MK542_09955 JAKUZA010000079.1 Protein Homology CDS 1264 2610 . + 0 ID=cds-MCY7218465.1;Parent=gene-MK542_09955;Dbxref=NCBI_GP:MCY7218465.1;Name=MCY7218465.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808235.1;locus_tag=MK542_09955;product=type I glutamate--ammonia ligase;protein_id=MCY7218465.1;transl_table=11 JAKUZA010000079.1 Genbank gene 2665 3066 . + . ID=gene-MK542_09960;Name=MK542_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09960 JAKUZA010000079.1 Protein Homology CDS 2665 3066 . + 0 ID=cds-MCY7218466.1;Parent=gene-MK542_09960;Dbxref=NCBI_GP:MCY7218466.1;Name=MCY7218466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901568.1;locus_tag=MK542_09960;product=GNAT family N-acetyltransferase;protein_id=MCY7218466.1;transl_table=11 JAKUZA010000079.1 Genbank gene 3053 3248 . - . ID=gene-MK542_09965;Name=MK542_09965;end_range=3248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09965;partial=true JAKUZA010000079.1 GeneMarkS-2+ CDS 3053 3248 . - 1 ID=cds-MCY7218467.1;Parent=gene-MK542_09965;Dbxref=NCBI_GP:MCY7218467.1;Name=MCY7218467.1;end_range=3248,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_09965;partial=true;product=hypothetical protein;protein_id=MCY7218467.1;transl_table=11 ##sequence-region JAKUZA010000007.1 1 43571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000007.1 Genbank region 1 43571 . + . ID=JAKUZA010000007.1:1..43571;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000007.1 Genbank pseudogene 305 2122 . + . ID=gene-MK542_00655;Name=MK542_00655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00655;pseudo=true JAKUZA010000007.1 Protein Homology CDS 305 2122 . + 0 ID=cds-MK542_00655;Parent=gene-MK542_00655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999704.1;locus_tag=MK542_00655;product=C69 family dipeptidase;pseudo=true;transl_table=11 JAKUZA010000007.1 Genbank gene 2567 2650 . + . ID=gene-MK542_00660;Name=MK542_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00660 JAKUZA010000007.1 Protein Homology CDS 2567 2650 . + 0 ID=cds-MCY7216689.1;Parent=gene-MK542_00660;Dbxref=NCBI_GP:MCY7216689.1;Name=MCY7216689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012948.2;locus_tag=MK542_00660;product=hypothetical protein;protein_id=MCY7216689.1;transl_table=11 JAKUZA010000007.1 Genbank gene 3096 4004 . - . ID=gene-MK542_00665;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=MK542_00665 JAKUZA010000007.1 Protein Homology CDS 3096 4004 . - 0 ID=cds-MCY7216690.1;Parent=gene-MK542_00665;Dbxref=NCBI_GP:MCY7216690.1;Name=MCY7216690.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371539.1;locus_tag=MK542_00665;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=MCY7216690.1;transl_table=11 JAKUZA010000007.1 Genbank gene 4034 5050 . - . ID=gene-MK542_00670;Name=MK542_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00670 JAKUZA010000007.1 Protein Homology CDS 4034 5050 . - 0 ID=cds-MCY7216691.1;Parent=gene-MK542_00670;Dbxref=NCBI_GP:MCY7216691.1;Name=MCY7216691.1;Ontology_term=GO:0046168,GO:0004367,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999706.1;locus_tag=MK542_00670;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MCY7216691.1;transl_table=11 JAKUZA010000007.1 Genbank gene 5210 6916 . + . ID=gene-MK542_00675;Name=MK542_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00675 JAKUZA010000007.1 Protein Homology CDS 5210 6916 . + 0 ID=cds-MCY7216692.1;Parent=gene-MK542_00675;Dbxref=NCBI_GP:MCY7216692.1;Name=MCY7216692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905723.1;locus_tag=MK542_00675;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7216692.1;transl_table=11 JAKUZA010000007.1 Genbank gene 6918 8687 . + . ID=gene-MK542_00680;Name=MK542_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00680 JAKUZA010000007.1 Protein Homology CDS 6918 8687 . + 0 ID=cds-MCY7216693.1;Parent=gene-MK542_00680;Dbxref=NCBI_GP:MCY7216693.1;Name=MCY7216693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859866.1;locus_tag=MK542_00680;product=ABC transporter ATP-binding protein/permease;protein_id=MCY7216693.1;transl_table=11 JAKUZA010000007.1 Genbank gene 8869 9558 . + . ID=gene-MK542_00685;Name=MK542_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00685 JAKUZA010000007.1 Protein Homology CDS 8869 9558 . + 0 ID=cds-MCY7216694.1;Parent=gene-MK542_00685;Dbxref=NCBI_GP:MCY7216694.1;Name=MCY7216694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605864.1;locus_tag=MK542_00685;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=MCY7216694.1;transl_table=11 JAKUZA010000007.1 Genbank gene 9814 10263 . + . ID=gene-MK542_00690;Name=MK542_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00690 JAKUZA010000007.1 Protein Homology CDS 9814 10263 . + 0 ID=cds-MCY7216695.1;Parent=gene-MK542_00690;Dbxref=NCBI_GP:MCY7216695.1;Name=MCY7216695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907877.1;locus_tag=MK542_00690;product=8-oxo-dGTP diphosphatase;protein_id=MCY7216695.1;transl_table=11 JAKUZA010000007.1 Genbank gene 10349 10792 . + . ID=gene-MK542_00695;Name=MK542_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00695 JAKUZA010000007.1 Protein Homology CDS 10349 10792 . + 0 ID=cds-MCY7216696.1;Parent=gene-MK542_00695;Dbxref=NCBI_GP:MCY7216696.1;Name=MCY7216696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701981.1;locus_tag=MK542_00695;product=dUTP diphosphatase;protein_id=MCY7216696.1;transl_table=11 JAKUZA010000007.1 Genbank gene 10794 11330 . + . ID=gene-MK542_00700;Name=MK542_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00700 JAKUZA010000007.1 Protein Homology CDS 10794 11330 . + 0 ID=cds-MCY7216697.1;Parent=gene-MK542_00700;Dbxref=NCBI_GP:MCY7216697.1;Name=MCY7216697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926228.1;locus_tag=MK542_00700;product=phosphoglycerate mutase family protein;protein_id=MCY7216697.1;transl_table=11 JAKUZA010000007.1 Genbank gene 11323 12684 . + . ID=gene-MK542_00705;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=MK542_00705 JAKUZA010000007.1 Protein Homology CDS 11323 12684 . + 0 ID=cds-MCY7216698.1;Parent=gene-MK542_00705;Dbxref=NCBI_GP:MCY7216698.1;Name=MCY7216698.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027046.1;locus_tag=MK542_00705;product=DNA repair protein RadA;protein_id=MCY7216698.1;transl_table=11 JAKUZA010000007.1 Genbank gene 12769 13464 . + . ID=gene-MK542_00710;Name=MK542_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00710 JAKUZA010000007.1 Protein Homology CDS 12769 13464 . + 0 ID=cds-MCY7216699.1;Parent=gene-MK542_00710;Dbxref=NCBI_GP:MCY7216699.1;Name=MCY7216699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893942.1;locus_tag=MK542_00710;product=TIGR00266 family protein;protein_id=MCY7216699.1;transl_table=11 JAKUZA010000007.1 Genbank gene 13601 14095 . + . ID=gene-MK542_00715;Name=MK542_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00715 JAKUZA010000007.1 Protein Homology CDS 13601 14095 . + 0 ID=cds-MCY7216700.1;Parent=gene-MK542_00715;Dbxref=NCBI_GP:MCY7216700.1;Name=MCY7216700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591608.1;locus_tag=MK542_00715;product=carbonic anhydrase;protein_id=MCY7216700.1;transl_table=11 JAKUZA010000007.1 Genbank gene 14197 15063 . + . ID=gene-MK542_00720;Name=MK542_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00720 JAKUZA010000007.1 Protein Homology CDS 14197 15063 . + 0 ID=cds-MCY7216701.1;Parent=gene-MK542_00720;Dbxref=NCBI_GP:MCY7216701.1;Name=MCY7216701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399556.1;locus_tag=MK542_00720;product=ABC transporter permease;protein_id=MCY7216701.1;transl_table=11 JAKUZA010000007.1 Genbank gene 15060 15818 . + . ID=gene-MK542_00725;Name=MK542_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00725 JAKUZA010000007.1 Protein Homology CDS 15060 15818 . + 0 ID=cds-MCY7216702.1;Parent=gene-MK542_00725;Dbxref=NCBI_GP:MCY7216702.1;Name=MCY7216702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125420.1;locus_tag=MK542_00725;product=ABC transporter ATP-binding protein;protein_id=MCY7216702.1;transl_table=11 JAKUZA010000007.1 Genbank pseudogene 16359 17132 . - . ID=gene-MK542_00730;Name=MK542_00730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00730;pseudo=true JAKUZA010000007.1 Protein Homology CDS 16359 17132 . - 0 ID=cds-MK542_00730;Parent=gene-MK542_00730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943028.1;locus_tag=MK542_00730;product=ISL3 family transposase;pseudo=true;transl_table=11 JAKUZA010000007.1 Genbank pseudogene 17177 17632 . - . ID=gene-MK542_00735;Name=MK542_00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00735;pseudo=true JAKUZA010000007.1 Protein Homology CDS 17177 17632 . - 0 ID=cds-MK542_00735;Parent=gene-MK542_00735;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958936.1;locus_tag=MK542_00735;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAKUZA010000007.1 Genbank pseudogene 17724 18080 . + . ID=gene-MK542_00740;Name=MK542_00740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00740;pseudo=true JAKUZA010000007.1 Protein Homology CDS 17724 18080 . + 0 ID=cds-MK542_00740;Parent=gene-MK542_00740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900698.1;locus_tag=MK542_00740;product=DUF1304 family protein;pseudo=true;transl_table=11 JAKUZA010000007.1 Genbank gene 18194 18571 . + . ID=gene-MK542_00745;Name=MK542_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00745 JAKUZA010000007.1 Protein Homology CDS 18194 18571 . + 0 ID=cds-MCY7216703.1;Parent=gene-MK542_00745;Dbxref=NCBI_GP:MCY7216703.1;Name=MCY7216703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933016.1;locus_tag=MK542_00745;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=MCY7216703.1;transl_table=11 JAKUZA010000007.1 Genbank gene 18587 20065 . + . ID=gene-MK542_00750;Name=MK542_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00750 JAKUZA010000007.1 Protein Homology CDS 18587 20065 . + 0 ID=cds-MCY7216704.1;Parent=gene-MK542_00750;Dbxref=NCBI_GP:MCY7216704.1;Name=MCY7216704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895952.1;locus_tag=MK542_00750;product=M56 family metallopeptidase;protein_id=MCY7216704.1;transl_table=11 JAKUZA010000007.1 Genbank gene 20467 21198 . + . ID=gene-MK542_00755;Name=MK542_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00755 JAKUZA010000007.1 Protein Homology CDS 20467 21198 . + 0 ID=cds-MCY7216705.1;Parent=gene-MK542_00755;Dbxref=NCBI_GP:MCY7216705.1;Name=MCY7216705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187569.1;locus_tag=MK542_00755;product=polyphosphate polymerase domain-containing protein;protein_id=MCY7216705.1;transl_table=11 JAKUZA010000007.1 Genbank gene 21212 21895 . + . ID=gene-MK542_00760;Name=MK542_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00760 JAKUZA010000007.1 Protein Homology CDS 21212 21895 . + 0 ID=cds-MCY7216706.1;Parent=gene-MK542_00760;Dbxref=NCBI_GP:MCY7216706.1;Name=MCY7216706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902746.1;locus_tag=MK542_00760;product=DUF4956 domain-containing protein;protein_id=MCY7216706.1;transl_table=11 JAKUZA010000007.1 Genbank gene 22288 22587 . - . ID=gene-MK542_00765;Name=MK542_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00765 JAKUZA010000007.1 Protein Homology CDS 22288 22587 . - 0 ID=cds-MCY7216707.1;Parent=gene-MK542_00765;Dbxref=NCBI_GP:MCY7216707.1;Name=MCY7216707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165300.1;locus_tag=MK542_00765;product=DUF2871 domain-containing protein;protein_id=MCY7216707.1;transl_table=11 JAKUZA010000007.1 Genbank gene 22715 23380 . - . ID=gene-MK542_00770;Name=MK542_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00770 JAKUZA010000007.1 Protein Homology CDS 22715 23380 . - 0 ID=cds-MCY7216708.1;Parent=gene-MK542_00770;Dbxref=NCBI_GP:MCY7216708.1;Name=MCY7216708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009270578.1;locus_tag=MK542_00770;product=hypothetical protein;protein_id=MCY7216708.1;transl_table=11 JAKUZA010000007.1 Genbank gene 23412 23840 . - . ID=gene-MK542_00775;Name=MK542_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00775 JAKUZA010000007.1 Protein Homology CDS 23412 23840 . - 0 ID=cds-MCY7216709.1;Parent=gene-MK542_00775;Dbxref=NCBI_GP:MCY7216709.1;Name=MCY7216709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016173405.1;locus_tag=MK542_00775;product=hypothetical protein;protein_id=MCY7216709.1;transl_table=11 JAKUZA010000007.1 Genbank gene 23908 24465 . - . ID=gene-MK542_00780;Name=MK542_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00780 JAKUZA010000007.1 Protein Homology CDS 23908 24465 . - 0 ID=cds-MCY7216710.1;Parent=gene-MK542_00780;Dbxref=NCBI_GP:MCY7216710.1;Name=MCY7216710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=MK542_00780;product=TetR/AcrR family transcriptional regulator;protein_id=MCY7216710.1;transl_table=11 JAKUZA010000007.1 Genbank gene 24764 26431 . + . ID=gene-MK542_00785;Name=MK542_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00785 JAKUZA010000007.1 Protein Homology CDS 24764 26431 . + 0 ID=cds-MCY7216711.1;Parent=gene-MK542_00785;Dbxref=NCBI_GP:MCY7216711.1;Name=MCY7216711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902155.1;locus_tag=MK542_00785;product=ribonuclease J;protein_id=MCY7216711.1;transl_table=11 JAKUZA010000007.1 Genbank gene 26592 27371 . + . ID=gene-MK542_00790;Name=MK542_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00790 JAKUZA010000007.1 Protein Homology CDS 26592 27371 . + 0 ID=cds-MCY7216712.1;Parent=gene-MK542_00790;Dbxref=NCBI_GP:MCY7216712.1;Name=MCY7216712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290006.1;locus_tag=MK542_00790;product=esterase family protein;protein_id=MCY7216712.1;transl_table=11 JAKUZA010000007.1 Genbank gene 27483 28940 . + . ID=gene-MK542_00795;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=MK542_00795 JAKUZA010000007.1 Protein Homology CDS 27483 28940 . + 0 ID=cds-MCY7216713.1;Parent=gene-MK542_00795;Dbxref=NCBI_GP:MCY7216713.1;Name=MCY7216713.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999715.1;locus_tag=MK542_00795;product=glutamate--tRNA ligase;protein_id=MCY7216713.1;transl_table=11 JAKUZA010000007.1 Genbank gene 29038 29613 . + . ID=gene-MK542_00800;Name=MK542_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00800 JAKUZA010000007.1 Protein Homology CDS 29038 29613 . + 0 ID=cds-MCY7216714.1;Parent=gene-MK542_00800;Dbxref=NCBI_GP:MCY7216714.1;Name=MCY7216714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837576.1;locus_tag=MK542_00800;product=DUF6287 domain-containing protein;protein_id=MCY7216714.1;transl_table=11 JAKUZA010000007.1 Genbank gene 29794 30993 . + . ID=gene-MK542_00805;Name=MK542_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00805 JAKUZA010000007.1 Protein Homology CDS 29794 30993 . + 0 ID=cds-MCY7216715.1;Parent=gene-MK542_00805;Dbxref=NCBI_GP:MCY7216715.1;Name=MCY7216715.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999716.1;locus_tag=MK542_00805;product=argininosuccinate synthase;protein_id=MCY7216715.1;transl_table=11 JAKUZA010000007.1 Genbank gene 31008 32390 . + . ID=gene-MK542_00810;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=MK542_00810 JAKUZA010000007.1 Protein Homology CDS 31008 32390 . + 0 ID=cds-MCY7216716.1;Parent=gene-MK542_00810;Dbxref=NCBI_GP:MCY7216716.1;Name=MCY7216716.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908629.1;locus_tag=MK542_00810;product=argininosuccinate lyase;protein_id=MCY7216716.1;transl_table=11 JAKUZA010000007.1 Genbank gene 32617 32976 . + . ID=gene-MK542_00815;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=MK542_00815 JAKUZA010000007.1 Protein Homology CDS 32617 32976 . + 0 ID=cds-MCY7216717.1;Parent=gene-MK542_00815;Dbxref=NCBI_GP:MCY7216717.1;Name=MCY7216717.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928077.1;locus_tag=MK542_00815;product=ribonuclease P protein component;protein_id=MCY7216717.1;transl_table=11 JAKUZA010000007.1 Genbank gene 32960 33775 . + . ID=gene-MK542_00820;Name=MK542_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00820 JAKUZA010000007.1 Protein Homology CDS 32960 33775 . + 0 ID=cds-MCY7216718.1;Parent=gene-MK542_00820;Dbxref=NCBI_GP:MCY7216718.1;Name=MCY7216718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002267318.1;locus_tag=MK542_00820;product=YidC/Oxa1 family membrane protein insertase;protein_id=MCY7216718.1;transl_table=11 JAKUZA010000007.1 Genbank gene 33794 34819 . + . ID=gene-MK542_00825;Name=MK542_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00825 JAKUZA010000007.1 Protein Homology CDS 33794 34819 . + 0 ID=cds-MCY7216719.1;Parent=gene-MK542_00825;Dbxref=NCBI_GP:MCY7216719.1;Name=MCY7216719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837573.1;locus_tag=MK542_00825;product=protein jag;protein_id=MCY7216719.1;transl_table=11 JAKUZA010000007.1 Genbank gene 34880 35602 . + . ID=gene-MK542_00830;Name=MK542_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00830 JAKUZA010000007.1 GeneMarkS-2+ CDS 34880 35602 . + 0 ID=cds-MCY7216720.1;Parent=gene-MK542_00830;Dbxref=NCBI_GP:MCY7216720.1;Name=MCY7216720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_00830;product=hypothetical protein;protein_id=MCY7216720.1;transl_table=11 JAKUZA010000007.1 Genbank pseudogene 35684 36236 . + . ID=gene-MK542_00835;Name=MK542_00835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00835;pseudo=true JAKUZA010000007.1 Protein Homology CDS 35684 36236 . + 0 ID=cds-MK542_00835;Parent=gene-MK542_00835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591642.1;locus_tag=MK542_00835;product=ribonuclease P;pseudo=true;transl_table=11 JAKUZA010000007.1 Genbank gene 36375 36509 . + . ID=gene-MK542_00840;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=MK542_00840 JAKUZA010000007.1 Protein Homology CDS 36375 36509 . + 0 ID=cds-MCY7216721.1;Parent=gene-MK542_00840;Dbxref=NCBI_GP:MCY7216721.1;Name=MCY7216721.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=MK542_00840;product=50S ribosomal protein L34;protein_id=MCY7216721.1;transl_table=11 JAKUZA010000007.1 Genbank gene 36740 38152 . - . ID=gene-MK542_00845;Name=MK542_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00845 JAKUZA010000007.1 Protein Homology CDS 36740 38152 . - 0 ID=cds-MCY7216722.1;Parent=gene-MK542_00845;Dbxref=NCBI_GP:MCY7216722.1;Name=MCY7216722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591643.1;locus_tag=MK542_00845;product=DUF4173 domain-containing protein;protein_id=MCY7216722.1;transl_table=11 JAKUZA010000007.1 Genbank gene 38155 38373 . - . ID=gene-MK542_00850;Name=MK542_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00850 JAKUZA010000007.1 Protein Homology CDS 38155 38373 . - 0 ID=cds-MCY7216723.1;Parent=gene-MK542_00850;Dbxref=NCBI_GP:MCY7216723.1;Name=MCY7216723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902177.1;locus_tag=MK542_00850;product=helix-turn-helix transcriptional regulator;protein_id=MCY7216723.1;transl_table=11 JAKUZA010000007.1 Genbank gene 38382 38858 . - . ID=gene-MK542_00855;Name=MK542_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00855 JAKUZA010000007.1 Protein Homology CDS 38382 38858 . - 0 ID=cds-MCY7216724.1;Parent=gene-MK542_00855;Dbxref=NCBI_GP:MCY7216724.1;Name=MCY7216724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902179.1;locus_tag=MK542_00855;product=DUF2975 domain-containing protein;protein_id=MCY7216724.1;transl_table=11 JAKUZA010000007.1 Genbank gene 39114 40151 . + . ID=gene-MK542_00860;Name=MK542_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00860 JAKUZA010000007.1 Protein Homology CDS 39114 40151 . + 0 ID=cds-MCY7216725.1;Parent=gene-MK542_00860;Dbxref=NCBI_GP:MCY7216725.1;Name=MCY7216725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193846.1;locus_tag=MK542_00860;product=winged helix-turn-helix transcriptional regulator;protein_id=MCY7216725.1;transl_table=11 JAKUZA010000007.1 Genbank gene 40285 41517 . + . ID=gene-MK542_00865;Name=MK542_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00865 JAKUZA010000007.1 Protein Homology CDS 40285 41517 . + 0 ID=cds-MCY7216726.1;Parent=gene-MK542_00865;Dbxref=NCBI_GP:MCY7216726.1;Name=MCY7216726.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185260.1;locus_tag=MK542_00865;product=MFS transporter;protein_id=MCY7216726.1;transl_table=11 JAKUZA010000007.1 Genbank gene 41621 42391 . + . ID=gene-MK542_00870;Name=MK542_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00870 JAKUZA010000007.1 Protein Homology CDS 41621 42391 . + 0 ID=cds-MCY7216727.1;Parent=gene-MK542_00870;Dbxref=NCBI_GP:MCY7216727.1;Name=MCY7216727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876811.1;locus_tag=MK542_00870;product=TatD family hydrolase;protein_id=MCY7216727.1;transl_table=11 JAKUZA010000007.1 Genbank gene 42357 42947 . + . ID=gene-MK542_00875;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=MK542_00875 JAKUZA010000007.1 Protein Homology CDS 42357 42947 . + 0 ID=cds-MCY7216728.1;Parent=gene-MK542_00875;Dbxref=NCBI_GP:MCY7216728.1;Name=MCY7216728.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591647.1;locus_tag=MK542_00875;product=ribonuclease M5;protein_id=MCY7216728.1;transl_table=11 JAKUZA010000007.1 Genbank gene 42950 43571 . + . ID=gene-MK542_00880;Name=MK542_00880;end_range=43571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00880;partial=true JAKUZA010000007.1 GeneMarkS-2+ CDS 42950 43571 . + 0 ID=cds-MCY7216729.1;Parent=gene-MK542_00880;Dbxref=NCBI_GP:MCY7216729.1;Name=MCY7216729.1;end_range=43571,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_00880;partial=true;product=hypothetical protein;protein_id=MCY7216729.1;transl_table=11 ##sequence-region JAKUZA010000080.1 1 3834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000080.1 Genbank region 1 3834 . + . ID=JAKUZA010000080.1:1..3834;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000080.1 Genbank gene 599 1258 . - . ID=gene-MK542_09970;Name=MK542_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09970 JAKUZA010000080.1 Protein Homology CDS 599 1258 . - 0 ID=cds-MCY7218468.1;Parent=gene-MK542_09970;Dbxref=NCBI_GP:MCY7218468.1;Name=MCY7218468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003070797.1;locus_tag=MK542_09970;product=hypothetical protein;protein_id=MCY7218468.1;transl_table=11 JAKUZA010000080.1 Genbank gene 1403 2602 . + . ID=gene-MK542_09975;Name=MK542_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09975 JAKUZA010000080.1 Protein Homology CDS 1403 2602 . + 0 ID=cds-MCY7218469.1;Parent=gene-MK542_09975;Dbxref=NCBI_GP:MCY7218469.1;Name=MCY7218469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=MK542_09975;product=phosphoglycerate kinase;protein_id=MCY7218469.1;transl_table=11 JAKUZA010000080.1 Genbank gene 3127 3792 . + . ID=gene-MK542_09980;Name=MK542_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09980 JAKUZA010000080.1 Protein Homology CDS 3127 3792 . + 0 ID=cds-MCY7218470.1;Parent=gene-MK542_09980;Dbxref=NCBI_GP:MCY7218470.1;Name=MCY7218470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188880.1;locus_tag=MK542_09980;product=CHAP domain-containing protein;protein_id=MCY7218470.1;transl_table=11 ##sequence-region JAKUZA010000081.1 1 17371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000081.1 Genbank region 1 17371 . + . ID=JAKUZA010000081.1:1..17371;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000081.1 Genbank gene 205 1836 . - . ID=gene-MK542_09985;Name=MK542_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09985 JAKUZA010000081.1 Protein Homology CDS 205 1836 . - 0 ID=cds-MCY7218471.1;Parent=gene-MK542_09985;Dbxref=NCBI_GP:MCY7218471.1;Name=MCY7218471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605227.1;locus_tag=MK542_09985;product=polysaccharide biosynthesis protein;protein_id=MCY7218471.1;transl_table=11 JAKUZA010000081.1 Genbank gene 1923 3374 . + . ID=gene-MK542_09990;Name=MK542_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09990 JAKUZA010000081.1 Protein Homology CDS 1923 3374 . + 0 ID=cds-MCY7218472.1;Parent=gene-MK542_09990;Dbxref=NCBI_GP:MCY7218472.1;Name=MCY7218472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659174.1;locus_tag=MK542_09990;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=MCY7218472.1;transl_table=11 JAKUZA010000081.1 Genbank gene 3407 4156 . - . ID=gene-MK542_09995;Name=MK542_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_09995 JAKUZA010000081.1 Protein Homology CDS 3407 4156 . - 0 ID=cds-MCY7218473.1;Parent=gene-MK542_09995;Dbxref=NCBI_GP:MCY7218473.1;Name=MCY7218473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590130.1;locus_tag=MK542_09995;product=CPBP family intramembrane metalloprotease;protein_id=MCY7218473.1;transl_table=11 JAKUZA010000081.1 Genbank gene 4508 4729 . - . ID=gene-MK542_10000;Name=MK542_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10000 JAKUZA010000081.1 GeneMarkS-2+ CDS 4508 4729 . - 0 ID=cds-MCY7218474.1;Parent=gene-MK542_10000;Dbxref=NCBI_GP:MCY7218474.1;Name=MCY7218474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_10000;product=hypothetical protein;protein_id=MCY7218474.1;transl_table=11 JAKUZA010000081.1 Genbank gene 5222 6256 . - . ID=gene-MK542_10005;Name=MK542_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10005 JAKUZA010000081.1 Protein Homology CDS 5222 6256 . - 0 ID=cds-MCY7218475.1;Parent=gene-MK542_10005;Dbxref=NCBI_GP:MCY7218475.1;Name=MCY7218475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605850.1;locus_tag=MK542_10005;product=dihydrodipicolinate reductase;protein_id=MCY7218475.1;transl_table=11 JAKUZA010000081.1 Genbank gene 6343 7182 . + . ID=gene-MK542_10010;Name=MK542_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10010 JAKUZA010000081.1 Protein Homology CDS 6343 7182 . + 0 ID=cds-MCY7218476.1;Parent=gene-MK542_10010;Dbxref=NCBI_GP:MCY7218476.1;Name=MCY7218476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003086265.1;locus_tag=MK542_10010;product=helix-turn-helix domain-containing protein;protein_id=MCY7218476.1;transl_table=11 JAKUZA010000081.1 Genbank gene 7348 8688 . - . ID=gene-MK542_10015;Name=MK542_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10015 JAKUZA010000081.1 Protein Homology CDS 7348 8688 . - 0 ID=cds-MCY7218477.1;Parent=gene-MK542_10015;Dbxref=NCBI_GP:MCY7218477.1;Name=MCY7218477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190628.1;locus_tag=MK542_10015;product=hemolysin family protein;protein_id=MCY7218477.1;transl_table=11 JAKUZA010000081.1 Genbank gene 8779 10425 . - . ID=gene-MK542_10020;Name=MK542_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10020 JAKUZA010000081.1 Protein Homology CDS 8779 10425 . - 0 ID=cds-MCY7218478.1;Parent=gene-MK542_10020;Dbxref=NCBI_GP:MCY7218478.1;Name=MCY7218478.1;Ontology_term=GO:0006094;gbkey=CDS;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078381.1;locus_tag=MK542_10020;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=MCY7218478.1;transl_table=11 JAKUZA010000081.1 Genbank gene 10527 11651 . - . ID=gene-MK542_10025;Name=MK542_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10025 JAKUZA010000081.1 Protein Homology CDS 10527 11651 . - 0 ID=cds-MCY7218479.1;Parent=gene-MK542_10025;Dbxref=NCBI_GP:MCY7218479.1;Name=MCY7218479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659083.1;locus_tag=MK542_10025;product=AI-2E family transporter;protein_id=MCY7218479.1;transl_table=11 JAKUZA010000081.1 Genbank gene 11726 12520 . + . ID=gene-MK542_10030;Name=MK542_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10030 JAKUZA010000081.1 Protein Homology CDS 11726 12520 . + 0 ID=cds-MCY7218480.1;Parent=gene-MK542_10030;Dbxref=NCBI_GP:MCY7218480.1;Name=MCY7218480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590889.1;locus_tag=MK542_10030;product=ABC transporter ATP-binding protein;protein_id=MCY7218480.1;transl_table=11 JAKUZA010000081.1 Genbank gene 12517 14079 . + . ID=gene-MK542_10035;Name=MK542_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10035 JAKUZA010000081.1 Protein Homology CDS 12517 14079 . + 0 ID=cds-MCY7218481.1;Parent=gene-MK542_10035;Dbxref=NCBI_GP:MCY7218481.1;Name=MCY7218481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837343.1;locus_tag=MK542_10035;product=beta-carotene 15%2C15'-monooxygenase;protein_id=MCY7218481.1;transl_table=11 JAKUZA010000081.1 Genbank gene 14307 15359 . - . ID=gene-MK542_10040;Name=MK542_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10040 JAKUZA010000081.1 Protein Homology CDS 14307 15359 . - 0 ID=cds-MCY7218482.1;Parent=gene-MK542_10040;Dbxref=NCBI_GP:MCY7218482.1;Name=MCY7218482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=MK542_10040;product=restriction endonuclease subunit S;protein_id=MCY7218482.1;transl_table=11 JAKUZA010000081.1 Genbank gene 15553 17241 . - . ID=gene-MK542_10045;Name=MK542_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10045 JAKUZA010000081.1 Protein Homology CDS 15553 17241 . - 0 ID=cds-MCY7218483.1;Parent=gene-MK542_10045;Dbxref=NCBI_GP:MCY7218483.1;Name=MCY7218483.1;Ontology_term=GO:0006306;gbkey=CDS;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=MK542_10045;product=N-6 DNA methylase;protein_id=MCY7218483.1;transl_table=11 ##sequence-region JAKUZA010000082.1 1 1455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000082.1 Genbank region 1 1455 . + . ID=JAKUZA010000082.1:1..1455;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000082.1 Genbank gene 1 1434 . + . ID=gene-MK542_10050;Name=MK542_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10050;partial=true;start_range=.,1 JAKUZA010000082.1 Protein Homology CDS 1 1434 . + 0 ID=cds-MCY7218484.1;Parent=gene-MK542_10050;Dbxref=NCBI_GP:MCY7218484.1;Name=MCY7218484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026507.1;locus_tag=MK542_10050;partial=true;product=Cna B-type domain-containing protein;protein_id=MCY7218484.1;start_range=.,1;transl_table=11 ##sequence-region JAKUZA010000083.1 1 1456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000083.1 Genbank region 1 1456 . + . ID=JAKUZA010000083.1:1..1456;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000083.1 Genbank gene 1 1134 . - . ID=gene-MK542_10055;Name=MK542_10055;end_range=1134,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10055;partial=true;start_range=.,1 JAKUZA010000083.1 Protein Homology CDS 1 1134 . - 1 ID=cds-MCY7218485.1;Parent=gene-MK542_10055;Dbxref=NCBI_GP:MCY7218485.1;Name=MCY7218485.1;end_range=1134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000834569.1;locus_tag=MK542_10055;partial=true;product=cell wall protein;protein_id=MCY7218485.1;start_range=.,1;transl_table=11 JAKUZA010000083.1 Genbank gene 1232 1456 . - . ID=gene-MK542_10060;Name=MK542_10060;end_range=1456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10060;partial=true;start_range=.,1232 JAKUZA010000083.1 Protein Homology CDS 1232 1456 . - 0 ID=cds-MCY7218486.1;Parent=gene-MK542_10060;Dbxref=NCBI_GP:MCY7218486.1;Name=MCY7218486.1;end_range=1456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729613.1;locus_tag=MK542_10060;partial=true;product=hypothetical protein;protein_id=MCY7218486.1;start_range=.,1232;transl_table=11 ##sequence-region JAKUZA010000084.1 1 2886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000084.1 Genbank region 1 2886 . + . ID=JAKUZA010000084.1:1..2886;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000084.1 Genbank gene 112 1137 . + . ID=gene-MK542_10065;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=MK542_10065 JAKUZA010000084.1 Protein Homology CDS 112 1137 . + 0 ID=cds-MCY7218487.1;Parent=gene-MK542_10065;Dbxref=NCBI_GP:MCY7218487.1;Name=MCY7218487.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165454.1;locus_tag=MK542_10065;product=tryptophan--tRNA ligase;protein_id=MCY7218487.1;transl_table=11 JAKUZA010000084.1 Genbank gene 1304 2785 . + . ID=gene-MK542_10070;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=MK542_10070 JAKUZA010000084.1 Protein Homology CDS 1304 2785 . + 0 ID=cds-MCY7218488.1;Parent=gene-MK542_10070;Dbxref=NCBI_GP:MCY7218488.1;Name=MCY7218488.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003009220.1;locus_tag=MK542_10070;product=IMP dehydrogenase;protein_id=MCY7218488.1;transl_table=11 ##sequence-region JAKUZA010000085.1 1 1582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000085.1 Genbank region 1 1582 . + . ID=JAKUZA010000085.1:1..1582;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000085.1 Genbank gene 1 962 . - . ID=gene-MK542_10075;Name=MK542_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10075;partial=true;start_range=.,1 JAKUZA010000085.1 Protein Homology CDS 1 962 . - 0 ID=cds-MCY7218489.1;Parent=gene-MK542_10075;Dbxref=NCBI_GP:MCY7218489.1;Name=MCY7218489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816347.1;locus_tag=MK542_10075;partial=true;product=hypothetical protein;protein_id=MCY7218489.1;start_range=.,1;transl_table=11 JAKUZA010000085.1 Genbank gene 1098 1553 . - . ID=gene-MK542_10080;Name=MK542_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10080 JAKUZA010000085.1 GeneMarkS-2+ CDS 1098 1553 . - 0 ID=cds-MCY7218490.1;Parent=gene-MK542_10080;Dbxref=NCBI_GP:MCY7218490.1;Name=MCY7218490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_10080;product=hypothetical protein;protein_id=MCY7218490.1;transl_table=11 ##sequence-region JAKUZA010000086.1 1 1101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000086.1 Genbank region 1 1101 . + . ID=JAKUZA010000086.1:1..1101;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000086.1 Genbank pseudogene 169 1101 . + . ID=gene-MK542_10085;Name=MK542_10085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_10085;pseudo=true JAKUZA010000086.1 Protein Homology CDS 169 1101 . + 0 ID=cds-MK542_10085;Parent=gene-MK542_10085;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1;locus_tag=MK542_10085;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000087.1 1 1910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000087.1 Genbank region 1 1910 . + . ID=JAKUZA010000087.1:1..1910;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000087.1 Genbank gene 1 322 . - . ID=gene-MK542_10090;Name=MK542_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10090;partial=true;start_range=.,1 JAKUZA010000087.1 Protein Homology CDS 1 322 . - 0 ID=cds-MCY7218491.1;Parent=gene-MK542_10090;Dbxref=NCBI_GP:MCY7218491.1;Name=MCY7218491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886406.1;locus_tag=MK542_10090;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MCY7218491.1;start_range=.,1;transl_table=11 JAKUZA010000087.1 Genbank pseudogene 521 1780 . + . ID=gene-MK542_10095;Name=MK542_10095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_10095;pseudo=true JAKUZA010000087.1 Protein Homology CDS 521 1780 . + 0 ID=cds-MK542_10095;Parent=gene-MK542_10095;Note=frameshifted;Ontology_term=GO:0042398;gbkey=CDS;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659181.1;locus_tag=MK542_10095;product=glutamate-cysteine ligase family protein;pseudo=true;transl_table=11 ##sequence-region JAKUZA010000088.1 1 1219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000088.1 Genbank region 1 1219 . + . ID=JAKUZA010000088.1:1..1219;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000088.1 Genbank gene 1 156 . + . ID=gene-MK542_10100;Name=MK542_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10100;partial=true;start_range=.,1 JAKUZA010000088.1 Protein Homology CDS 1 156 . + 0 ID=cds-MCY7218492.1;Parent=gene-MK542_10100;Dbxref=NCBI_GP:MCY7218492.1;Name=MCY7218492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370962.1;locus_tag=MK542_10100;partial=true;product=IS481 family transposase;protein_id=MCY7218492.1;start_range=.,1;transl_table=11 JAKUZA010000088.1 Genbank gene 305 1192 . + . ID=gene-MK542_10105;Name=MK542_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_10105 JAKUZA010000088.1 Protein Homology CDS 305 1192 . + 0 ID=cds-MCY7218493.1;Parent=gene-MK542_10105;Dbxref=NCBI_GP:MCY7218493.1;Name=MCY7218493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931316.1;locus_tag=MK542_10105;product=YitT family protein;protein_id=MCY7218493.1;transl_table=11 ##sequence-region JAKUZA010000008.1 1 39687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000008.1 Genbank region 1 39687 . + . ID=JAKUZA010000008.1:1..39687;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000008.1 Genbank gene 176 1861 . - . ID=gene-MK542_00885;Name=MK542_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00885 JAKUZA010000008.1 Protein Homology CDS 176 1861 . - 0 ID=cds-MCY7216730.1;Parent=gene-MK542_00885;Dbxref=NCBI_GP:MCY7216730.1;Name=MCY7216730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268913.1;locus_tag=MK542_00885;product=ribonuclease J;protein_id=MCY7216730.1;transl_table=11 JAKUZA010000008.1 Genbank gene 1865 2095 . - . ID=gene-MK542_00890;Name=MK542_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00890 JAKUZA010000008.1 Protein Homology CDS 1865 2095 . - 0 ID=cds-MCY7216731.1;Parent=gene-MK542_00890;Dbxref=NCBI_GP:MCY7216731.1;Name=MCY7216731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376926.1;locus_tag=MK542_00890;product=DNA-dependent RNA polymerase auxiliary subunit epsilon family protein;protein_id=MCY7216731.1;transl_table=11 JAKUZA010000008.1 Genbank gene 2407 3093 . + . ID=gene-MK542_00895;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=MK542_00895 JAKUZA010000008.1 Protein Homology CDS 2407 3093 . + 0 ID=cds-MCY7216732.1;Parent=gene-MK542_00895;Dbxref=NCBI_GP:MCY7216732.1;Name=MCY7216732.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193795.1;locus_tag=MK542_00895;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MCY7216732.1;transl_table=11 JAKUZA010000008.1 Genbank gene 3090 3542 . + . ID=gene-MK542_00900;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=MK542_00900 JAKUZA010000008.1 Protein Homology CDS 3090 3542 . + 0 ID=cds-MCY7216733.1;Parent=gene-MK542_00900;Dbxref=NCBI_GP:MCY7216733.1;Name=MCY7216733.1;Ontology_term=GO:0006464,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine N-acetyltransferase activity|0008999||IEA;go_process=cellular protein modification process|0006464||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593857.1;locus_tag=MK542_00900;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=MCY7216733.1;transl_table=11 JAKUZA010000008.1 Genbank gene 3532 4557 . + . ID=gene-MK542_00905;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=MK542_00905 JAKUZA010000008.1 Protein Homology CDS 3532 4557 . + 0 ID=cds-MCY7216734.1;Parent=gene-MK542_00905;Dbxref=NCBI_GP:MCY7216734.1;Name=MCY7216734.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595540.1;locus_tag=MK542_00905;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MCY7216734.1;transl_table=11 JAKUZA010000008.1 Genbank gene 4554 5249 . + . ID=gene-MK542_00910;Name=MK542_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00910 JAKUZA010000008.1 Protein Homology CDS 4554 5249 . + 0 ID=cds-MCY7216735.1;Parent=gene-MK542_00910;Dbxref=NCBI_GP:MCY7216735.1;Name=MCY7216735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898437.1;locus_tag=MK542_00910;product=AzlC family ABC transporter permease;protein_id=MCY7216735.1;transl_table=11 JAKUZA010000008.1 Genbank gene 5239 5562 . + . ID=gene-MK542_00915;Name=MK542_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00915 JAKUZA010000008.1 Protein Homology CDS 5239 5562 . + 0 ID=cds-MCY7216736.1;Parent=gene-MK542_00915;Dbxref=NCBI_GP:MCY7216736.1;Name=MCY7216736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253911.1;locus_tag=MK542_00915;product=AzlD domain-containing protein;protein_id=MCY7216736.1;transl_table=11 JAKUZA010000008.1 Genbank pseudogene 5900 6640 . + . ID=gene-MK542_00920;Name=MK542_00920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MK542_00920;pseudo=true JAKUZA010000008.1 Protein Homology CDS 5900 6640 . + 0 ID=cds-MK542_00920;Parent=gene-MK542_00920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931945.1;locus_tag=MK542_00920;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 JAKUZA010000008.1 Genbank gene 6807 7262 . - . ID=gene-MK542_00925;Name=MK542_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00925 JAKUZA010000008.1 Protein Homology CDS 6807 7262 . - 0 ID=cds-MCY7216737.1;Parent=gene-MK542_00925;Dbxref=NCBI_GP:MCY7216737.1;Name=MCY7216737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081770.1;locus_tag=MK542_00925;product=8-oxo-dGTP diphosphatase;protein_id=MCY7216737.1;transl_table=11 JAKUZA010000008.1 Genbank gene 7272 7793 . - . ID=gene-MK542_00930;Name=MK542_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00930 JAKUZA010000008.1 Protein Homology CDS 7272 7793 . - 0 ID=cds-MCY7216738.1;Parent=gene-MK542_00930;Dbxref=NCBI_GP:MCY7216738.1;Name=MCY7216738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400041.1;locus_tag=MK542_00930;product=DUF1697 domain-containing protein;protein_id=MCY7216738.1;transl_table=11 JAKUZA010000008.1 Genbank gene 7830 9008 . - . ID=gene-MK542_00935;Name=MK542_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00935 JAKUZA010000008.1 Protein Homology CDS 7830 9008 . - 0 ID=cds-MCY7216739.1;Parent=gene-MK542_00935;Dbxref=NCBI_GP:MCY7216739.1;Name=MCY7216739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591166.1;locus_tag=MK542_00935;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MCY7216739.1;transl_table=11 JAKUZA010000008.1 Genbank gene 9636 9905 . + . ID=gene-MK542_00940;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=MK542_00940 JAKUZA010000008.1 Protein Homology CDS 9636 9905 . + 0 ID=cds-MCY7216740.1;Parent=gene-MK542_00940;Dbxref=NCBI_GP:MCY7216740.1;Name=MCY7216740.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=MK542_00940;product=30S ribosomal protein S15;protein_id=MCY7216740.1;transl_table=11 JAKUZA010000008.1 Genbank gene 10367 11293 . - . ID=gene-MK542_00945;Name=MK542_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00945 JAKUZA010000008.1 Protein Homology CDS 10367 11293 . - 0 ID=cds-MCY7216741.1;Parent=gene-MK542_00945;Dbxref=NCBI_GP:MCY7216741.1;Name=MCY7216741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914057.1;locus_tag=MK542_00945;product=lysophospholipase;protein_id=MCY7216741.1;transl_table=11 JAKUZA010000008.1 Genbank gene 11581 11994 . + . ID=gene-MK542_00950;Name=MK542_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00950 JAKUZA010000008.1 Protein Homology CDS 11581 11994 . + 0 ID=cds-MCY7216742.1;Parent=gene-MK542_00950;Dbxref=NCBI_GP:MCY7216742.1;Name=MCY7216742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808354.1;locus_tag=MK542_00950;product=YjdF family protein;protein_id=MCY7216742.1;transl_table=11 JAKUZA010000008.1 Genbank gene 12183 12404 . + . ID=gene-MK542_00955;Name=MK542_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00955 JAKUZA010000008.1 Protein Homology CDS 12183 12404 . + 0 ID=cds-MCY7216743.1;Parent=gene-MK542_00955;Dbxref=NCBI_GP:MCY7216743.1;Name=MCY7216743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730461.1;locus_tag=MK542_00955;product=DUF4649 family protein;protein_id=MCY7216743.1;transl_table=11 JAKUZA010000008.1 Genbank gene 12422 12736 . + . ID=gene-MK542_00960;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=MK542_00960 JAKUZA010000008.1 Protein Homology CDS 12422 12736 . + 0 ID=cds-MCY7216744.1;Parent=gene-MK542_00960;Dbxref=NCBI_GP:MCY7216744.1;Name=MCY7216744.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922416.1;locus_tag=MK542_00960;product=thioredoxin;protein_id=MCY7216744.1;transl_table=11 JAKUZA010000008.1 Genbank gene 12926 13327 . + . ID=gene-MK542_00965;Name=MK542_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00965 JAKUZA010000008.1 Protein Homology CDS 12926 13327 . + 0 ID=cds-MCY7216745.1;Parent=gene-MK542_00965;Dbxref=NCBI_GP:MCY7216745.1;Name=MCY7216745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902270.1;locus_tag=MK542_00965;product=hypothetical protein;protein_id=MCY7216745.1;transl_table=11 JAKUZA010000008.1 Genbank gene 13679 14491 . - . ID=gene-MK542_00970;Name=MK542_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00970 JAKUZA010000008.1 GeneMarkS-2+ CDS 13679 14491 . - 0 ID=cds-MCY7216746.1;Parent=gene-MK542_00970;Dbxref=NCBI_GP:MCY7216746.1;Name=MCY7216746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MK542_00970;product=hypothetical protein;protein_id=MCY7216746.1;transl_table=11 JAKUZA010000008.1 Genbank gene 14687 16483 . - . ID=gene-MK542_00975;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=MK542_00975 JAKUZA010000008.1 Protein Homology CDS 14687 16483 . - 0 ID=cds-MCY7216747.1;Parent=gene-MK542_00975;Dbxref=NCBI_GP:MCY7216747.1;Name=MCY7216747.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435555.1;locus_tag=MK542_00975;product=oligoendopeptidase F;protein_id=MCY7216747.1;transl_table=11 JAKUZA010000008.1 Genbank gene 16963 19158 . + . ID=gene-MK542_00980;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=MK542_00980 JAKUZA010000008.1 Protein Homology CDS 16963 19158 . + 0 ID=cds-MCY7216748.1;Parent=gene-MK542_00980;Dbxref=NCBI_GP:MCY7216748.1;Name=MCY7216748.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030884.1;locus_tag=MK542_00980;product=polyribonucleotide nucleotidyltransferase;protein_id=MCY7216748.1;transl_table=11 JAKUZA010000008.1 Genbank gene 19391 20008 . + . ID=gene-MK542_00985;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=MK542_00985 JAKUZA010000008.1 Protein Homology CDS 19391 20008 . + 0 ID=cds-MCY7216749.1;Parent=gene-MK542_00985;Dbxref=NCBI_GP:MCY7216749.1;Name=MCY7216749.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539958.1;locus_tag=MK542_00985;product=serine O-acetyltransferase;protein_id=MCY7216749.1;transl_table=11 JAKUZA010000008.1 Genbank gene 20075 20266 . + . ID=gene-MK542_00990;Name=MK542_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00990 JAKUZA010000008.1 Protein Homology CDS 20075 20266 . + 0 ID=cds-MCY7216750.1;Parent=gene-MK542_00990;Dbxref=NCBI_GP:MCY7216750.1;Name=MCY7216750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999870.1;locus_tag=MK542_00990;product=YdeI/OmpD-associated family protein;protein_id=MCY7216750.1;transl_table=11 JAKUZA010000008.1 Genbank gene 20280 21047 . + . ID=gene-MK542_00995;Name=MK542_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_00995 JAKUZA010000008.1 Protein Homology CDS 20280 21047 . + 0 ID=cds-MCY7216751.1;Parent=gene-MK542_00995;Dbxref=NCBI_GP:MCY7216751.1;Name=MCY7216751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039525.1;locus_tag=MK542_00995;product=nucleoside phosphorylase;protein_id=MCY7216751.1;transl_table=11 JAKUZA010000008.1 Genbank gene 21130 22473 . + . ID=gene-MK542_01000;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=MK542_01000 JAKUZA010000008.1 Protein Homology CDS 21130 22473 . + 0 ID=cds-MCY7216752.1;Parent=gene-MK542_01000;Dbxref=NCBI_GP:MCY7216752.1;Name=MCY7216752.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916477.1;locus_tag=MK542_01000;product=cysteine--tRNA ligase;protein_id=MCY7216752.1;transl_table=11 JAKUZA010000008.1 Genbank gene 22466 22858 . + . ID=gene-MK542_01005;Name=MK542_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01005 JAKUZA010000008.1 Protein Homology CDS 22466 22858 . + 0 ID=cds-MCY7216753.1;Parent=gene-MK542_01005;Dbxref=NCBI_GP:MCY7216753.1;Name=MCY7216753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591126.1;locus_tag=MK542_01005;product=Mini-ribonuclease 3;protein_id=MCY7216753.1;transl_table=11 JAKUZA010000008.1 Genbank gene 23261 25108 . + . ID=gene-MK542_01010;Name=MK542_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01010 JAKUZA010000008.1 Protein Homology CDS 23261 25108 . + 0 ID=cds-MCY7216754.1;Parent=gene-MK542_01010;Dbxref=NCBI_GP:MCY7216754.1;Name=MCY7216754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270239.1;locus_tag=MK542_01010;product=APC family permease;protein_id=MCY7216754.1;transl_table=11 JAKUZA010000008.1 Genbank gene 25187 26152 . - . ID=gene-MK542_01015;Name=MK542_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01015 JAKUZA010000008.1 Protein Homology CDS 25187 26152 . - 0 ID=cds-MCY7216755.1;Parent=gene-MK542_01015;Dbxref=NCBI_GP:MCY7216755.1;Name=MCY7216755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927861.1;locus_tag=MK542_01015;product=aromatic acid exporter family protein;protein_id=MCY7216755.1;transl_table=11 JAKUZA010000008.1 Genbank gene 26306 27034 . + . ID=gene-MK542_01020;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=MK542_01020 JAKUZA010000008.1 Protein Homology CDS 26306 27034 . + 0 ID=cds-MCY7216756.1;Parent=gene-MK542_01020;Dbxref=NCBI_GP:MCY7216756.1;Name=MCY7216756.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193397.1;locus_tag=MK542_01020;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=MCY7216756.1;transl_table=11 JAKUZA010000008.1 Genbank gene 27031 27552 . + . ID=gene-MK542_01025;Name=MK542_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01025 JAKUZA010000008.1 Protein Homology CDS 27031 27552 . + 0 ID=cds-MCY7216757.1;Parent=gene-MK542_01025;Dbxref=NCBI_GP:MCY7216757.1;Name=MCY7216757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914045.1;locus_tag=MK542_01025;product=NYN domain-containing protein;protein_id=MCY7216757.1;transl_table=11 JAKUZA010000008.1 Genbank gene 27542 28405 . + . ID=gene-MK542_01030;Name=MK542_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01030 JAKUZA010000008.1 Protein Homology CDS 27542 28405 . + 0 ID=cds-MCY7216758.1;Parent=gene-MK542_01030;Dbxref=NCBI_GP:MCY7216758.1;Name=MCY7216758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003082010.1;locus_tag=MK542_01030;product=DegV family protein;protein_id=MCY7216758.1;transl_table=11 JAKUZA010000008.1 Genbank gene 28598 29044 . + . ID=gene-MK542_01035;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=MK542_01035 JAKUZA010000008.1 Protein Homology CDS 28598 29044 . + 0 ID=cds-MCY7216759.1;Parent=gene-MK542_01035;Dbxref=NCBI_GP:MCY7216759.1;Name=MCY7216759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=MK542_01035;product=50S ribosomal protein L13;protein_id=MCY7216759.1;transl_table=11 JAKUZA010000008.1 Genbank gene 29063 29455 . + . ID=gene-MK542_01040;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=MK542_01040 JAKUZA010000008.1 Protein Homology CDS 29063 29455 . + 0 ID=cds-MCY7216760.1;Parent=gene-MK542_01040;Dbxref=NCBI_GP:MCY7216760.1;Name=MCY7216760.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=MK542_01040;product=30S ribosomal protein S9;protein_id=MCY7216760.1;transl_table=11 JAKUZA010000008.1 Genbank gene 29747 29995 . + . ID=gene-MK542_01045;Name=MK542_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01045 JAKUZA010000008.1 Protein Homology CDS 29747 29995 . + 0 ID=cds-MCY7216761.1;Parent=gene-MK542_01045;Dbxref=NCBI_GP:MCY7216761.1;Name=MCY7216761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.2;locus_tag=MK542_01045;product=hypothetical protein;protein_id=MCY7216761.1;transl_table=11 JAKUZA010000008.1 Genbank gene 30151 30354 . - . ID=gene-MK542_01050;Name=MK542_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01050 JAKUZA010000008.1 Protein Homology CDS 30151 30354 . - 0 ID=cds-MCY7216762.1;Parent=gene-MK542_01050;Dbxref=NCBI_GP:MCY7216762.1;Name=MCY7216762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466557.1;locus_tag=MK542_01050;product=CsbD family protein;protein_id=MCY7216762.1;transl_table=11 JAKUZA010000008.1 Genbank gene 30491 31123 . - . ID=gene-MK542_01055;Name=MK542_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01055 JAKUZA010000008.1 Protein Homology CDS 30491 31123 . - 0 ID=cds-MCY7216763.1;Parent=gene-MK542_01055;Dbxref=NCBI_GP:MCY7216763.1;Name=MCY7216763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659166.1;locus_tag=MK542_01055;product=DUF421 domain-containing protein;protein_id=MCY7216763.1;transl_table=11 JAKUZA010000008.1 Genbank gene 31120 31572 . - . ID=gene-MK542_01060;Name=MK542_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01060 JAKUZA010000008.1 Protein Homology CDS 31120 31572 . - 0 ID=cds-MCY7216764.1;Parent=gene-MK542_01060;Dbxref=NCBI_GP:MCY7216764.1;Name=MCY7216764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808395.1;locus_tag=MK542_01060;product=DUF3290 domain-containing protein;protein_id=MCY7216764.1;transl_table=11 JAKUZA010000008.1 Genbank gene 32197 33633 . + . ID=gene-MK542_01065;Name=MK542_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01065 JAKUZA010000008.1 Protein Homology CDS 32197 33633 . + 0 ID=cds-MCY7216765.1;Parent=gene-MK542_01065;Dbxref=NCBI_GP:MCY7216765.1;Name=MCY7216765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861533.1;locus_tag=MK542_01065;product=6-phospho-beta-glucosidase;protein_id=MCY7216765.1;transl_table=11 JAKUZA010000008.1 Genbank gene 33646 33885 . + . ID=gene-MK542_01070;Name=MK542_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01070 JAKUZA010000008.1 Protein Homology CDS 33646 33885 . + 0 ID=cds-MCY7216766.1;Parent=gene-MK542_01070;Dbxref=NCBI_GP:MCY7216766.1;Name=MCY7216766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037516.1;locus_tag=MK542_01070;product=hypothetical protein;protein_id=MCY7216766.1;transl_table=11 JAKUZA010000008.1 Genbank gene 33983 34222 . + . ID=gene-MK542_01075;Name=MK542_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01075 JAKUZA010000008.1 Protein Homology CDS 33983 34222 . + 0 ID=cds-MCY7216767.1;Parent=gene-MK542_01075;Dbxref=NCBI_GP:MCY7216767.1;Name=MCY7216767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580385.1;locus_tag=MK542_01075;product=SemiSWEET transporter;protein_id=MCY7216767.1;transl_table=11 JAKUZA010000008.1 Genbank gene 34341 34655 . + . ID=gene-MK542_01080;Name=MK542_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01080 JAKUZA010000008.1 Protein Homology CDS 34341 34655 . + 0 ID=cds-MCY7216768.1;Parent=gene-MK542_01080;Dbxref=NCBI_GP:MCY7216768.1;Name=MCY7216768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037418.1;locus_tag=MK542_01080;product=PTS cellobiose transporter subunit IIB;protein_id=MCY7216768.1;transl_table=11 JAKUZA010000008.1 Genbank gene 34711 36702 . + . ID=gene-MK542_01085;Name=MK542_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01085 JAKUZA010000008.1 Protein Homology CDS 34711 36702 . + 0 ID=cds-MCY7216769.1;Parent=gene-MK542_01085;Dbxref=NCBI_GP:MCY7216769.1;Name=MCY7216769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568311.1;locus_tag=MK542_01085;product=BglG family transcription antiterminator;protein_id=MCY7216769.1;transl_table=11 JAKUZA010000008.1 Genbank gene 36715 37032 . + . ID=gene-MK542_01090;Name=MK542_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01090 JAKUZA010000008.1 Protein Homology CDS 36715 37032 . + 0 ID=cds-MCY7216770.1;Parent=gene-MK542_01090;Dbxref=NCBI_GP:MCY7216770.1;Name=MCY7216770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003073299.1;locus_tag=MK542_01090;product=PTS cellobiose transporter subunit IIA;protein_id=MCY7216770.1;transl_table=11 JAKUZA010000008.1 Genbank gene 37055 37561 . + . ID=gene-MK542_01095;Name=MK542_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01095 JAKUZA010000008.1 Protein Homology CDS 37055 37561 . + 0 ID=cds-MCY7216771.1;Parent=gene-MK542_01095;Dbxref=NCBI_GP:MCY7216771.1;Name=MCY7216771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568312.1;locus_tag=MK542_01095;product=hypothetical protein;protein_id=MCY7216771.1;transl_table=11 JAKUZA010000008.1 Genbank gene 37601 38944 . + . ID=gene-MK542_01100;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=MK542_01100 JAKUZA010000008.1 Protein Homology CDS 37601 38944 . + 0 ID=cds-MCY7216772.1;Parent=gene-MK542_01100;Dbxref=NCBI_GP:MCY7216772.1;Name=MCY7216772.1;gbkey=CDS;gene=celB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568313.1;locus_tag=MK542_01100;product=PTS cellobiose transporter subunit IIC;protein_id=MCY7216772.1;transl_table=11 ##sequence-region JAKUZA010000009.1 1 4250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=45634 JAKUZA010000009.1 Genbank region 1 4250 . + . ID=JAKUZA010000009.1:1..4250;Dbxref=taxon:45634;collected-by=Rigshospitalet;collection-date=2015-01-01;country=Denmark: Copenhagen;gbkey=Src;isolation-source=blood;lat-lon=55.69 N 12.56 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=A15000414 JAKUZA010000009.1 Genbank gene 1 225 . - . ID=gene-MK542_01105;Name=MK542_01105;end_range=225,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01105;partial=true;start_range=.,1 JAKUZA010000009.1 Protein Homology CDS 1 225 . - 0 ID=cds-MCY7216773.1;Parent=gene-MK542_01105;Dbxref=NCBI_GP:MCY7216773.1;Name=MCY7216773.1;end_range=225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729613.1;locus_tag=MK542_01105;partial=true;product=hypothetical protein;protein_id=MCY7216773.1;start_range=.,1;transl_table=11 JAKUZA010000009.1 Genbank gene 281 3459 . - . ID=gene-MK542_01110;Name=MK542_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MK542_01110;partial=true;start_range=.,281 JAKUZA010000009.1 Protein Homology CDS 281 3459 . - 0 ID=cds-MCY7216774.1;Parent=gene-MK542_01110;Dbxref=NCBI_GP:MCY7216774.1;Name=MCY7216774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019962.2;locus_tag=MK542_01110;partial=true;product=hypothetical protein;protein_id=MCY7216774.1;start_range=.,281;transl_table=11 ###