##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2832642v1 #!genome-build-accession NCBI_Assembly:GCA_028326425.1 #!annotation-date 01/25/2023 16:03:19 #!annotation-source NCBI ##sequence-region JAQMMZ010000010.1 1 65499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000010.1 Genbank region 1 65499 . + . ID=JAQMMZ010000010.1:1..65499;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000010.1 Genbank gene 377 898 . + . ID=gene-PN289_05595;Name=PN289_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05595 JAQMMZ010000010.1 Protein Homology CDS 377 898 . + 0 ID=cds-MDB8828119.1;Parent=gene-PN289_05595;Dbxref=NCBI_GP:MDB8828119.1;Name=MDB8828119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842914.1;locus_tag=PN289_05595;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8828119.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 876 2243 . + . ID=gene-PN289_05600;Name=PN289_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05600 JAQMMZ010000010.1 GeneMarkS-2+ CDS 876 2243 . + 0 ID=cds-MDB8828120.1;Parent=gene-PN289_05600;Dbxref=NCBI_GP:MDB8828120.1;Name=MDB8828120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_05600;product=hypothetical protein;protein_id=MDB8828120.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 2323 3105 . - . ID=gene-PN289_05605;Name=PN289_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05605 JAQMMZ010000010.1 Protein Homology CDS 2323 3105 . - 0 ID=cds-MDB8828121.1;Parent=gene-PN289_05605;Dbxref=NCBI_GP:MDB8828121.1;Name=MDB8828121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843056.1;locus_tag=PN289_05605;product=metal ABC transporter permease;protein_id=MDB8828121.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 3115 3768 . - . ID=gene-PN289_05610;Name=PN289_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05610 JAQMMZ010000010.1 Protein Homology CDS 3115 3768 . - 0 ID=cds-MDB8828122.1;Parent=gene-PN289_05610;Dbxref=NCBI_GP:MDB8828122.1;Name=MDB8828122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595758.1;locus_tag=PN289_05610;product=metal ABC transporter ATP-binding protein;protein_id=MDB8828122.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 3924 5003 . - . ID=gene-PN289_05615;Name=PN289_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05615 JAQMMZ010000010.1 Protein Homology CDS 3924 5003 . - 0 ID=cds-MDB8828123.1;Parent=gene-PN289_05615;Dbxref=NCBI_GP:MDB8828123.1;Name=MDB8828123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842883.1;locus_tag=PN289_05615;product=alpha/beta hydrolase;protein_id=MDB8828123.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 5125 6198 . - . ID=gene-PN289_05620;Name=PN289_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05620 JAQMMZ010000010.1 Protein Homology CDS 5125 6198 . - 0 ID=cds-MDB8828124.1;Parent=gene-PN289_05620;Dbxref=NCBI_GP:MDB8828124.1;Name=MDB8828124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842939.1;locus_tag=PN289_05620;product=metal ABC transporter substrate-binding protein;protein_id=MDB8828124.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 6376 6834 . + . ID=gene-PN289_05625;Name=PN289_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05625 JAQMMZ010000010.1 Protein Homology CDS 6376 6834 . + 0 ID=cds-MDB8828125.1;Parent=gene-PN289_05625;Dbxref=NCBI_GP:MDB8828125.1;Name=MDB8828125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843073.1;locus_tag=PN289_05625;product=Fur family transcriptional regulator;protein_id=MDB8828125.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 6930 7094 . + . ID=gene-PN289_05630;Name=PN289_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05630 JAQMMZ010000010.1 Protein Homology CDS 6930 7094 . + 0 ID=cds-MDB8828126.1;Parent=gene-PN289_05630;Dbxref=NCBI_GP:MDB8828126.1;Name=MDB8828126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843076.1;locus_tag=PN289_05630;product=rubredoxin;protein_id=MDB8828126.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 7354 8154 . + . ID=gene-PN289_05635;Name=PN289_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05635 JAQMMZ010000010.1 Protein Homology CDS 7354 8154 . + 0 ID=cds-MDB8828127.1;Parent=gene-PN289_05635;Dbxref=NCBI_GP:MDB8828127.1;Name=MDB8828127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842946.1;locus_tag=PN289_05635;product=MBL fold metallo-hydrolase;protein_id=MDB8828127.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 8154 8636 . + . ID=gene-PN289_05640;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PN289_05640 JAQMMZ010000010.1 Protein Homology CDS 8154 8636 . + 0 ID=cds-MDB8828128.1;Parent=gene-PN289_05640;Dbxref=NCBI_GP:MDB8828128.1;Name=MDB8828128.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843042.1;locus_tag=PN289_05640;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=MDB8828128.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 8657 9709 . + . ID=gene-PN289_05645;Name=PN289_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05645 JAQMMZ010000010.1 Protein Homology CDS 8657 9709 . + 0 ID=cds-MDB8828129.1;Parent=gene-PN289_05645;Dbxref=NCBI_GP:MDB8828129.1;Name=MDB8828129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843037.1;locus_tag=PN289_05645;product=DnaD domain protein;protein_id=MDB8828129.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 9722 10708 . + . ID=gene-PN289_05650;Name=PN289_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05650 JAQMMZ010000010.1 Protein Homology CDS 9722 10708 . + 0 ID=cds-MDB8828130.1;Parent=gene-PN289_05650;Dbxref=NCBI_GP:MDB8828130.1;Name=MDB8828130.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843005.1;locus_tag=PN289_05650;product=ATP-binding protein;protein_id=MDB8828130.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 11008 12345 . - . ID=gene-PN289_05655;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PN289_05655 JAQMMZ010000010.1 Protein Homology CDS 11008 12345 . - 0 ID=cds-MDB8828131.1;Parent=gene-PN289_05655;Dbxref=NCBI_GP:MDB8828131.1;Name=MDB8828131.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595686.1;locus_tag=PN289_05655;product=replicative DNA helicase;protein_id=MDB8828131.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 12462 12908 . - . ID=gene-PN289_05660;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PN289_05660 JAQMMZ010000010.1 Protein Homology CDS 12462 12908 . - 0 ID=cds-MDB8828132.1;Parent=gene-PN289_05660;Dbxref=NCBI_GP:MDB8828132.1;Name=MDB8828132.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842980.1;locus_tag=PN289_05660;product=50S ribosomal protein L9;protein_id=MDB8828132.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 12911 14914 . - . ID=gene-PN289_05665;Name=PN289_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05665 JAQMMZ010000010.1 Protein Homology CDS 12911 14914 . - 0 ID=cds-MDB8828133.1;Parent=gene-PN289_05665;Dbxref=NCBI_GP:MDB8828133.1;Name=MDB8828133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842867.1;locus_tag=PN289_05665;product=DHH family phosphoesterase;protein_id=MDB8828133.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 14904 15989 . - . ID=gene-PN289_05670;Name=PN289_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05670 JAQMMZ010000010.1 Protein Homology CDS 14904 15989 . - 0 ID=cds-MDB8828134.1;Parent=gene-PN289_05670;Dbxref=NCBI_GP:MDB8828134.1;Name=MDB8828134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842966.1;locus_tag=PN289_05670;product=DUF2232 domain-containing protein;protein_id=MDB8828134.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 16165 16392 . - . ID=gene-PN289_05675;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PN289_05675 JAQMMZ010000010.1 Protein Homology CDS 16165 16392 . - 0 ID=cds-MDB8828135.1;Parent=gene-PN289_05675;Dbxref=NCBI_GP:MDB8828135.1;Name=MDB8828135.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420527.1;locus_tag=PN289_05675;product=30S ribosomal protein S18;protein_id=MDB8828135.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 16413 16862 . - . ID=gene-PN289_05680;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=PN289_05680 JAQMMZ010000010.1 Protein Homology CDS 16413 16862 . - 0 ID=cds-MDB8828136.1;Parent=gene-PN289_05680;Dbxref=NCBI_GP:MDB8828136.1;Name=MDB8828136.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420524.1;locus_tag=PN289_05680;product=single-stranded DNA-binding protein;protein_id=MDB8828136.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 16877 17167 . - . ID=gene-PN289_05685;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PN289_05685 JAQMMZ010000010.1 Protein Homology CDS 16877 17167 . - 0 ID=cds-MDB8828137.1;Parent=gene-PN289_05685;Dbxref=NCBI_GP:MDB8828137.1;Name=MDB8828137.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842919.1;locus_tag=PN289_05685;product=30S ribosomal protein S6;protein_id=MDB8828137.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 17545 18444 . - . ID=gene-PN289_05690;Name=PN289_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05690 JAQMMZ010000010.1 Protein Homology CDS 17545 18444 . - 0 ID=cds-MDB8828138.1;Parent=gene-PN289_05690;Dbxref=NCBI_GP:MDB8828138.1;Name=MDB8828138.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842988.1;locus_tag=PN289_05690;product=radical SAM protein;protein_id=MDB8828138.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 18567 19763 . - . ID=gene-PN289_05695;Name=PN289_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05695 JAQMMZ010000010.1 Protein Homology CDS 18567 19763 . - 0 ID=cds-MDB8828139.1;Parent=gene-PN289_05695;Dbxref=NCBI_GP:MDB8828139.1;Name=MDB8828139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842975.1;locus_tag=PN289_05695;product=PLP-dependent aminotransferase family protein;protein_id=MDB8828139.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 19844 20023 . - . ID=gene-PN289_05700;Name=PN289_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05700 JAQMMZ010000010.1 Protein Homology CDS 19844 20023 . - 0 ID=cds-MDB8828140.1;Parent=gene-PN289_05700;Dbxref=NCBI_GP:MDB8828140.1;Name=MDB8828140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842904.1;locus_tag=PN289_05700;product=DUF951 domain-containing protein;protein_id=MDB8828140.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 20036 20302 . - . ID=gene-PN289_05705;Name=PN289_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05705 JAQMMZ010000010.1 Protein Homology CDS 20036 20302 . - 0 ID=cds-MDB8828141.1;Parent=gene-PN289_05705;Dbxref=NCBI_GP:MDB8828141.1;Name=MDB8828141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842948.1;locus_tag=PN289_05705;product=DUF3343 domain-containing protein;protein_id=MDB8828141.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 20311 20922 . - . ID=gene-PN289_05710;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PN289_05710 JAQMMZ010000010.1 Protein Homology CDS 20311 20922 . - 0 ID=cds-MDB8828142.1;Parent=gene-PN289_05710;Dbxref=NCBI_GP:MDB8828142.1;Name=MDB8828142.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842882.1;locus_tag=PN289_05710;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=MDB8828142.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 21228 21872 . + . ID=gene-PN289_05715;Name=PN289_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05715 JAQMMZ010000010.1 Protein Homology CDS 21228 21872 . + 0 ID=cds-MDB8828143.1;Parent=gene-PN289_05715;Dbxref=NCBI_GP:MDB8828143.1;Name=MDB8828143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845367.1;locus_tag=PN289_05715;product=GerMN domain-containing protein;protein_id=MDB8828143.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 21926 23071 . + . ID=gene-PN289_05720;Name=PN289_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05720 JAQMMZ010000010.1 Protein Homology CDS 21926 23071 . + 0 ID=cds-MDB8828144.1;Parent=gene-PN289_05720;Dbxref=NCBI_GP:MDB8828144.1;Name=MDB8828144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845366.1;locus_tag=PN289_05720;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MDB8828144.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 23277 23999 . - . ID=gene-PN289_05725;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PN289_05725 JAQMMZ010000010.1 Protein Homology CDS 23277 23999 . - 0 ID=cds-MDB8828145.1;Parent=gene-PN289_05725;Dbxref=NCBI_GP:MDB8828145.1;Name=MDB8828145.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845365.1;locus_tag=PN289_05725;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=MDB8828145.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 24017 25912 . - . ID=gene-PN289_05730;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PN289_05730 JAQMMZ010000010.1 Protein Homology CDS 24017 25912 . - 0 ID=cds-MDB8828146.1;Parent=gene-PN289_05730;Dbxref=NCBI_GP:MDB8828146.1;Name=MDB8828146.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845364.1;locus_tag=PN289_05730;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=MDB8828146.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 25928 27307 . - . ID=gene-PN289_05735;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PN289_05735 JAQMMZ010000010.1 Protein Homology CDS 25928 27307 . - 0 ID=cds-MDB8828147.1;Parent=gene-PN289_05735;Dbxref=NCBI_GP:MDB8828147.1;Name=MDB8828147.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843071.1;locus_tag=PN289_05735;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MDB8828147.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 27730 28266 . + . ID=gene-PN289_05740;Name=PN289_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05740 JAQMMZ010000010.1 Protein Homology CDS 27730 28266 . + 0 ID=cds-MDB8828148.1;Parent=gene-PN289_05740;Dbxref=NCBI_GP:MDB8828148.1;Name=MDB8828148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845362.1;locus_tag=PN289_05740;product=hypothetical protein;protein_id=MDB8828148.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 28333 29037 . + . ID=gene-PN289_05745;Name=PN289_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05745 JAQMMZ010000010.1 Protein Homology CDS 28333 29037 . + 0 ID=cds-MDB8828149.1;Parent=gene-PN289_05745;Dbxref=NCBI_GP:MDB8828149.1;Name=MDB8828149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842998.1;locus_tag=PN289_05745;product=HAD family hydrolase;protein_id=MDB8828149.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 29133 29894 . - . ID=gene-PN289_05750;Name=PN289_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05750 JAQMMZ010000010.1 Protein Homology CDS 29133 29894 . - 0 ID=cds-MDB8828150.1;Parent=gene-PN289_05750;Dbxref=NCBI_GP:MDB8828150.1;Name=MDB8828150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843040.1;locus_tag=PN289_05750;product=KH domain-containing protein;protein_id=MDB8828150.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 29917 30609 . - . ID=gene-PN289_05755;Name=PN289_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05755 JAQMMZ010000010.1 Protein Homology CDS 29917 30609 . - 0 ID=cds-MDB8828151.1;Parent=gene-PN289_05755;Dbxref=NCBI_GP:MDB8828151.1;Name=MDB8828151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843082.1;locus_tag=PN289_05755;product=YidC/Oxa1 family membrane protein insertase;protein_id=MDB8828151.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 30652 30903 . - . ID=gene-PN289_05760;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PN289_05760 JAQMMZ010000010.1 Protein Homology CDS 30652 30903 . - 0 ID=cds-MDB8828152.1;Parent=gene-PN289_05760;Dbxref=NCBI_GP:MDB8828152.1;Name=MDB8828152.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842861.1;locus_tag=PN289_05760;product=membrane protein insertion efficiency factor YidD;protein_id=MDB8828152.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 30924 31265 . - . ID=gene-PN289_05765;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=PN289_05765 JAQMMZ010000010.1 Protein Homology CDS 30924 31265 . - 0 ID=cds-MDB8828153.1;Parent=gene-PN289_05765;Dbxref=NCBI_GP:MDB8828153.1;Name=MDB8828153.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788402.1;locus_tag=PN289_05765;product=ribonuclease P protein component;protein_id=MDB8828153.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 31369 31503 . - . ID=gene-PN289_05770;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PN289_05770 JAQMMZ010000010.1 Protein Homology CDS 31369 31503 . - 0 ID=cds-MDB8828154.1;Parent=gene-PN289_05770;Dbxref=NCBI_GP:MDB8828154.1;Name=MDB8828154.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006440948.1;locus_tag=PN289_05770;product=50S ribosomal protein L34;protein_id=MDB8828154.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 32026 33402 . + . ID=gene-PN289_05775;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PN289_05775 JAQMMZ010000010.1 Protein Homology CDS 32026 33402 . + 0 ID=cds-MDB8828155.1;Parent=gene-PN289_05775;Dbxref=NCBI_GP:MDB8828155.1;Name=MDB8828155.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842971.1;locus_tag=PN289_05775;product=chromosomal replication initiator protein DnaA;protein_id=MDB8828155.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 33684 34787 . + . ID=gene-PN289_05780;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PN289_05780 JAQMMZ010000010.1 Protein Homology CDS 33684 34787 . + 0 ID=cds-MDB8828156.1;Parent=gene-PN289_05780;Dbxref=NCBI_GP:MDB8828156.1;Name=MDB8828156.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842964.1;locus_tag=PN289_05780;product=DNA polymerase III subunit beta;protein_id=MDB8828156.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 35019 35225 . + . ID=gene-PN289_05785;Name=PN289_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05785 JAQMMZ010000010.1 Protein Homology CDS 35019 35225 . + 0 ID=cds-MDB8828157.1;Parent=gene-PN289_05785;Dbxref=NCBI_GP:MDB8828157.1;Name=MDB8828157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843078.1;locus_tag=PN289_05785;product=RNA-binding S4 domain-containing protein;protein_id=MDB8828157.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 35234 36349 . + . ID=gene-PN289_05790;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PN289_05790 JAQMMZ010000010.1 Protein Homology CDS 35234 36349 . + 0 ID=cds-MDB8828158.1;Parent=gene-PN289_05790;Dbxref=NCBI_GP:MDB8828158.1;Name=MDB8828158.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843019.1;locus_tag=PN289_05790;product=DNA replication/repair protein RecF;protein_id=MDB8828158.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 36350 38257 . + . ID=gene-PN289_05795;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PN289_05795 JAQMMZ010000010.1 Protein Homology CDS 36350 38257 . + 0 ID=cds-MDB8828159.1;Parent=gene-PN289_05795;Dbxref=NCBI_GP:MDB8828159.1;Name=MDB8828159.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842935.1;locus_tag=PN289_05795;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=MDB8828159.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 38274 40721 . + . ID=gene-PN289_05800;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PN289_05800 JAQMMZ010000010.1 Protein Homology CDS 38274 40721 . + 0 ID=cds-MDB8828160.1;Parent=gene-PN289_05800;Dbxref=NCBI_GP:MDB8828160.1;Name=MDB8828160.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842977.1;locus_tag=PN289_05800;product=DNA gyrase subunit A;protein_id=MDB8828160.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 40734 41051 . + . ID=gene-PN289_05805;Name=PN289_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05805 JAQMMZ010000010.1 Protein Homology CDS 40734 41051 . + 0 ID=cds-MDB8828161.1;Parent=gene-PN289_05805;Dbxref=NCBI_GP:MDB8828161.1;Name=MDB8828161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845350.1;locus_tag=PN289_05805;product=STAS domain-containing protein;protein_id=MDB8828161.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 41056 41463 . + . ID=gene-PN289_05810;Name=PN289_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05810 JAQMMZ010000010.1 Protein Homology CDS 41056 41463 . + 0 ID=cds-MDB8828162.1;Parent=gene-PN289_05810;Dbxref=NCBI_GP:MDB8828162.1;Name=MDB8828162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842959.1;locus_tag=PN289_05810;product=ATP-binding protein;protein_id=MDB8828162.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 41463 42236 . + . ID=gene-PN289_05815;Name=PN289_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05815 JAQMMZ010000010.1 Protein Homology CDS 41463 42236 . + 0 ID=cds-MDB8828163.1;Parent=gene-PN289_05815;Dbxref=NCBI_GP:MDB8828163.1;Name=MDB8828163.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843023.1;locus_tag=PN289_05815;product=SigB/SigF/SigG family RNA polymerase sigma factor;protein_id=MDB8828163.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 42249 43079 . + . ID=gene-PN289_05820;Name=PN289_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05820 JAQMMZ010000010.1 Protein Homology CDS 42249 43079 . + 0 ID=cds-MDB8828164.1;Parent=gene-PN289_05820;Dbxref=NCBI_GP:MDB8828164.1;Name=MDB8828164.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842922.1;locus_tag=PN289_05820;product=mechanosensitive ion channel;protein_id=MDB8828164.1;transl_table=11 JAQMMZ010000010.1 cmsearch binding_site 43127 43334 . + . ID=id-JAQMMZ010000010.1:43127..43334;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000010.1 Genbank gene 43467 44744 . + . ID=gene-PN289_05825;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PN289_05825 JAQMMZ010000010.1 Protein Homology CDS 43467 44744 . + 0 ID=cds-MDB8828165.1;Parent=gene-PN289_05825;Dbxref=NCBI_GP:MDB8828165.1;Name=MDB8828165.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006441208.1;locus_tag=PN289_05825;product=serine--tRNA ligase;protein_id=MDB8828165.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 44814 45818 . - . ID=gene-PN289_05830;Name=PN289_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05830 JAQMMZ010000010.1 Protein Homology CDS 44814 45818 . - 0 ID=cds-MDB8828166.1;Parent=gene-PN289_05830;Dbxref=NCBI_GP:MDB8828166.1;Name=MDB8828166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845348.1;locus_tag=PN289_05830;product=hypothetical protein;protein_id=MDB8828166.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 46004 47269 . + . ID=gene-PN289_05835;Name=PN289_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05835 JAQMMZ010000010.1 Protein Homology CDS 46004 47269 . + 0 ID=cds-MDB8828167.1;Parent=gene-PN289_05835;Dbxref=NCBI_GP:MDB8828167.1;Name=MDB8828167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595471.1;locus_tag=PN289_05835;product=sugar ABC transporter substrate-binding protein;protein_id=MDB8828167.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 47388 48134 . + . ID=gene-PN289_05840;Name=PN289_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05840 JAQMMZ010000010.1 Protein Homology CDS 47388 48134 . + 0 ID=cds-MDB8828168.1;Parent=gene-PN289_05840;Dbxref=NCBI_GP:MDB8828168.1;Name=MDB8828168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009214535.1;locus_tag=PN289_05840;product=sugar ABC transporter permease;protein_id=MDB8828168.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 48136 48978 . + . ID=gene-PN289_05845;Name=PN289_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05845 JAQMMZ010000010.1 Protein Homology CDS 48136 48978 . + 0 ID=cds-MDB8828169.1;Parent=gene-PN289_05845;Dbxref=NCBI_GP:MDB8828169.1;Name=MDB8828169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845344.1;locus_tag=PN289_05845;product=carbohydrate ABC transporter permease;protein_id=MDB8828169.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 49317 49511 . + . ID=gene-PN289_05850;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PN289_05850 JAQMMZ010000010.1 Protein Homology CDS 49317 49511 . + 0 ID=cds-MDB8828170.1;Parent=gene-PN289_05850;Dbxref=NCBI_GP:MDB8828170.1;Name=MDB8828170.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845343.1;locus_tag=PN289_05850;product=sulfur carrier protein ThiS;protein_id=MDB8828170.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 49504 50130 . + . ID=gene-PN289_05855;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=PN289_05855 JAQMMZ010000010.1 Protein Homology CDS 49504 50130 . + 0 ID=cds-MDB8828171.1;Parent=gene-PN289_05855;Dbxref=NCBI_GP:MDB8828171.1;Name=MDB8828171.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845342.1;locus_tag=PN289_05855;product=sulfur carrier protein ThiS adenylyltransferase ThiF;protein_id=MDB8828171.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 50270 51037 . + . ID=gene-PN289_05860;Name=PN289_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05860 JAQMMZ010000010.1 Protein Homology CDS 50270 51037 . + 0 ID=cds-MDB8828172.1;Parent=gene-PN289_05860;Dbxref=NCBI_GP:MDB8828172.1;Name=MDB8828172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788536.1;locus_tag=PN289_05860;product=thiazole synthase;protein_id=MDB8828172.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 51048 52259 . + . ID=gene-PN289_05865;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PN289_05865 JAQMMZ010000010.1 Protein Homology CDS 51048 52259 . + 0 ID=cds-MDB8828173.1;Parent=gene-PN289_05865;Dbxref=NCBI_GP:MDB8828173.1;Name=MDB8828173.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842906.1;locus_tag=PN289_05865;product=2-iminoacetate synthase ThiH;protein_id=MDB8828173.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 52264 52935 . + . ID=gene-PN289_05870;Name=PN289_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05870 JAQMMZ010000010.1 Protein Homology CDS 52264 52935 . + 0 ID=cds-MDB8828174.1;Parent=gene-PN289_05870;Dbxref=NCBI_GP:MDB8828174.1;Name=MDB8828174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842970.1;locus_tag=PN289_05870;product=thiamine phosphate synthase;protein_id=MDB8828174.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 53204 53668 . + . ID=gene-PN289_05875;Name=PN289_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05875 JAQMMZ010000010.1 Protein Homology CDS 53204 53668 . + 0 ID=cds-MDB8828175.1;Parent=gene-PN289_05875;Dbxref=NCBI_GP:MDB8828175.1;Name=MDB8828175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842905.1;locus_tag=PN289_05875;product=nucleoside deaminase;protein_id=MDB8828175.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 53805 53942 . + . ID=gene-PN289_05880;Name=PN289_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05880 JAQMMZ010000010.1 Protein Homology CDS 53805 53942 . + 0 ID=cds-MDB8828176.1;Parent=gene-PN289_05880;Dbxref=NCBI_GP:MDB8828176.1;Name=MDB8828176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595497.1;locus_tag=PN289_05880;product=hypothetical protein;protein_id=MDB8828176.1;transl_table=11 JAQMMZ010000010.1 Genbank pseudogene 54012 54804 . - . ID=gene-PN289_05885;Name=PN289_05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_05885;pseudo=true JAQMMZ010000010.1 Protein Homology CDS 54012 54804 . - 0 ID=cds-PN289_05885;Parent=gene-PN289_05885;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009644455.1;locus_tag=PN289_05885;product=transposase;pseudo=true;transl_table=11 JAQMMZ010000010.1 Genbank gene 55080 55304 . + . ID=gene-PN289_05890;Name=PN289_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05890 JAQMMZ010000010.1 Protein Homology CDS 55080 55304 . + 0 ID=cds-MDB8828177.1;Parent=gene-PN289_05890;Dbxref=NCBI_GP:MDB8828177.1;Name=MDB8828177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011860795.1;locus_tag=PN289_05890;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828177.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 55385 56359 . + . ID=gene-PN289_05895;Name=PN289_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05895 JAQMMZ010000010.1 Protein Homology CDS 55385 56359 . + 0 ID=cds-MDB8828178.1;Parent=gene-PN289_05895;Dbxref=NCBI_GP:MDB8828178.1;Name=MDB8828178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019117834.1;locus_tag=PN289_05895;product=AraC family transcriptional regulator;protein_id=MDB8828178.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 56496 57098 . + . ID=gene-PN289_05900;Name=PN289_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05900 JAQMMZ010000010.1 Protein Homology CDS 56496 57098 . + 0 ID=cds-MDB8828179.1;Parent=gene-PN289_05900;Dbxref=NCBI_GP:MDB8828179.1;Name=MDB8828179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004824598.1;locus_tag=PN289_05900;product=MptD family putative ECF transporter S component;protein_id=MDB8828179.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 57115 57795 . + . ID=gene-PN289_05905;Name=PN289_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05905 JAQMMZ010000010.1 Protein Homology CDS 57115 57795 . + 0 ID=cds-MDB8828180.1;Parent=gene-PN289_05905;Dbxref=NCBI_GP:MDB8828180.1;Name=MDB8828180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011860797.1;locus_tag=PN289_05905;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8828180.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 57807 59279 . + . ID=gene-PN289_05910;Name=PN289_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05910 JAQMMZ010000010.1 Protein Homology CDS 57807 59279 . + 0 ID=cds-MDB8828181.1;Parent=gene-PN289_05910;Dbxref=NCBI_GP:MDB8828181.1;Name=MDB8828181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035775.1;locus_tag=PN289_05910;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=MDB8828181.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 59284 60999 . + . ID=gene-PN289_05915;Name=PN289_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05915 JAQMMZ010000010.1 Protein Homology CDS 59284 60999 . + 0 ID=cds-MDB8828182.1;Parent=gene-PN289_05915;Dbxref=NCBI_GP:MDB8828182.1;Name=MDB8828182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035842.1;locus_tag=PN289_05915;product=ABC transporter ATP-binding protein;protein_id=MDB8828182.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 61000 62748 . + . ID=gene-PN289_05920;Name=PN289_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05920 JAQMMZ010000010.1 Protein Homology CDS 61000 62748 . + 0 ID=cds-MDB8828183.1;Parent=gene-PN289_05920;Dbxref=NCBI_GP:MDB8828183.1;Name=MDB8828183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011860800.1;locus_tag=PN289_05920;product=ABC transporter ATP-binding protein;protein_id=MDB8828183.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 62764 64110 . + . ID=gene-PN289_05925;Name=PN289_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05925 JAQMMZ010000010.1 Protein Homology CDS 62764 64110 . + 0 ID=cds-MDB8828184.1;Parent=gene-PN289_05925;Dbxref=NCBI_GP:MDB8828184.1;Name=MDB8828184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009537685.1;locus_tag=PN289_05925;product=MATE family efflux transporter;protein_id=MDB8828184.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 64303 64719 . + . ID=gene-PN289_05930;Name=PN289_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05930 JAQMMZ010000010.1 Protein Homology CDS 64303 64719 . + 0 ID=cds-MDB8828185.1;Parent=gene-PN289_05930;Dbxref=NCBI_GP:MDB8828185.1;Name=MDB8828185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051310.1;locus_tag=PN289_05930;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8828185.1;transl_table=11 JAQMMZ010000010.1 Genbank gene 65186 65416 . + . ID=gene-PN289_05935;Name=PN289_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05935 JAQMMZ010000010.1 Protein Homology CDS 65186 65416 . + 0 ID=cds-MDB8828186.1;Parent=gene-PN289_05935;Dbxref=NCBI_GP:MDB8828186.1;Name=MDB8828186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004802629.1;locus_tag=PN289_05935;product=hypothetical protein;protein_id=MDB8828186.1;transl_table=11 ##sequence-region JAQMMZ010000011.1 1 59829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000011.1 Genbank region 1 59829 . + . ID=JAQMMZ010000011.1:1..59829;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000011.1 Genbank gene 970 1170 . + . ID=gene-PN289_05940;Name=PN289_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05940 JAQMMZ010000011.1 Protein Homology CDS 970 1170 . + 0 ID=cds-MDB8828187.1;Parent=gene-PN289_05940;Dbxref=NCBI_GP:MDB8828187.1;Name=MDB8828187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167331.1;locus_tag=PN289_05940;product=hypothetical protein;protein_id=MDB8828187.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 1185 2612 . - . ID=gene-PN289_05945;Name=PN289_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05945 JAQMMZ010000011.1 Protein Homology CDS 1185 2612 . - 0 ID=cds-MDB8828188.1;Parent=gene-PN289_05945;Dbxref=NCBI_GP:MDB8828188.1;Name=MDB8828188.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845593.1;locus_tag=PN289_05945;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDB8828188.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 2668 2919 . - . ID=gene-PN289_05950;Name=PN289_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05950 JAQMMZ010000011.1 Protein Homology CDS 2668 2919 . - 0 ID=cds-MDB8828189.1;Parent=gene-PN289_05950;Dbxref=NCBI_GP:MDB8828189.1;Name=MDB8828189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845594.1;locus_tag=PN289_05950;product=phage holin;protein_id=MDB8828189.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 2912 3265 . - . ID=gene-PN289_05955;Name=PN289_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05955 JAQMMZ010000011.1 Protein Homology CDS 2912 3265 . - 0 ID=cds-MDB8828190.1;Parent=gene-PN289_05955;Dbxref=NCBI_GP:MDB8828190.1;Name=MDB8828190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595295.1;locus_tag=PN289_05955;product=hypothetical protein;protein_id=MDB8828190.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 3342 3548 . - . ID=gene-PN289_05960;Name=PN289_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05960 JAQMMZ010000011.1 Protein Homology CDS 3342 3548 . - 0 ID=cds-MDB8828191.1;Parent=gene-PN289_05960;Dbxref=NCBI_GP:MDB8828191.1;Name=MDB8828191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845596.1;locus_tag=PN289_05960;product=CD1375 family protein;protein_id=MDB8828191.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 3560 3676 . - . ID=gene-PN289_05965;Name=PN289_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05965 JAQMMZ010000011.1 Protein Homology CDS 3560 3676 . - 0 ID=cds-MDB8828192.1;Parent=gene-PN289_05965;Dbxref=NCBI_GP:MDB8828192.1;Name=MDB8828192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040910.1;locus_tag=PN289_05965;product=CD1375 family protein;protein_id=MDB8828192.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 3676 4095 . - . ID=gene-PN289_05970;Name=PN289_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05970 JAQMMZ010000011.1 Protein Homology CDS 3676 4095 . - 0 ID=cds-MDB8828193.1;Parent=gene-PN289_05970;Dbxref=NCBI_GP:MDB8828193.1;Name=MDB8828193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845597.1;locus_tag=PN289_05970;product=hypothetical protein;protein_id=MDB8828193.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 4088 5320 . - . ID=gene-PN289_05975;Name=PN289_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05975 JAQMMZ010000011.1 GeneMarkS-2+ CDS 4088 5320 . - 0 ID=cds-MDB8828194.1;Parent=gene-PN289_05975;Dbxref=NCBI_GP:MDB8828194.1;Name=MDB8828194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_05975;product=hypothetical protein;protein_id=MDB8828194.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 5320 5958 . - . ID=gene-PN289_05980;Name=PN289_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05980 JAQMMZ010000011.1 Protein Homology CDS 5320 5958 . - 0 ID=cds-MDB8828195.1;Parent=gene-PN289_05980;Dbxref=NCBI_GP:MDB8828195.1;Name=MDB8828195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845601.1;locus_tag=PN289_05980;product=hypothetical protein;protein_id=MDB8828195.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 5952 6551 . - . ID=gene-PN289_05985;Name=PN289_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05985 JAQMMZ010000011.1 Protein Homology CDS 5952 6551 . - 0 ID=cds-MDB8828196.1;Parent=gene-PN289_05985;Dbxref=NCBI_GP:MDB8828196.1;Name=MDB8828196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021583.2;locus_tag=PN289_05985;product=DUF2313 domain-containing protein;protein_id=MDB8828196.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 6552 7598 . - . ID=gene-PN289_05990;Name=PN289_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05990 JAQMMZ010000011.1 Protein Homology CDS 6552 7598 . - 0 ID=cds-MDB8828197.1;Parent=gene-PN289_05990;Dbxref=NCBI_GP:MDB8828197.1;Name=MDB8828197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PN289_05990;product=baseplate J/gp47 family protein;protein_id=MDB8828197.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 7591 8025 . - . ID=gene-PN289_05995;Name=PN289_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05995 JAQMMZ010000011.1 Protein Homology CDS 7591 8025 . - 0 ID=cds-MDB8828198.1;Parent=gene-PN289_05995;Dbxref=NCBI_GP:MDB8828198.1;Name=MDB8828198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022387.2;locus_tag=PN289_05995;product=DUF2634 domain-containing protein;protein_id=MDB8828198.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 8018 8368 . - . ID=gene-PN289_06000;Name=PN289_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06000 JAQMMZ010000011.1 Protein Homology CDS 8018 8368 . - 0 ID=cds-MDB8828199.1;Parent=gene-PN289_06000;Dbxref=NCBI_GP:MDB8828199.1;Name=MDB8828199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022300.2;locus_tag=PN289_06000;product=DUF2577 family protein;protein_id=MDB8828199.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 8377 10299 . - . ID=gene-PN289_06005;Name=PN289_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06005 JAQMMZ010000011.1 Protein Homology CDS 8377 10299 . - 0 ID=cds-MDB8828200.1;Parent=gene-PN289_06005;Dbxref=NCBI_GP:MDB8828200.1;Name=MDB8828200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013073.2;locus_tag=PN289_06005;product=NlpC/P60 family protein;protein_id=MDB8828200.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 10296 10961 . - . ID=gene-PN289_06010;Name=PN289_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06010 JAQMMZ010000011.1 Protein Homology CDS 10296 10961 . - 0 ID=cds-MDB8828201.1;Parent=gene-PN289_06010;Dbxref=NCBI_GP:MDB8828201.1;Name=MDB8828201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=PN289_06010;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MDB8828201.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 10971 12722 . - . ID=gene-PN289_06015;Name=PN289_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06015 JAQMMZ010000011.1 GeneMarkS-2+ CDS 10971 12722 . - 0 ID=cds-MDB8828202.1;Parent=gene-PN289_06015;Dbxref=NCBI_GP:MDB8828202.1;Name=MDB8828202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06015;product=hypothetical protein;protein_id=MDB8828202.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 12709 12849 . - . ID=gene-PN289_06020;Name=PN289_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06020 JAQMMZ010000011.1 GeneMarkS-2+ CDS 12709 12849 . - 0 ID=cds-MDB8828203.1;Parent=gene-PN289_06020;Dbxref=NCBI_GP:MDB8828203.1;Name=MDB8828203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06020;product=hypothetical protein;protein_id=MDB8828203.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 12903 13310 . - . ID=gene-PN289_06025;Name=PN289_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06025 JAQMMZ010000011.1 Protein Homology CDS 12903 13310 . - 0 ID=cds-MDB8828204.1;Parent=gene-PN289_06025;Dbxref=NCBI_GP:MDB8828204.1;Name=MDB8828204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020464.2;locus_tag=PN289_06025;product=phage portal protein;protein_id=MDB8828204.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 13321 13764 . - . ID=gene-PN289_06030;Name=PN289_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06030 JAQMMZ010000011.1 Protein Homology CDS 13321 13764 . - 0 ID=cds-MDB8828205.1;Parent=gene-PN289_06030;Dbxref=NCBI_GP:MDB8828205.1;Name=MDB8828205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020949.2;locus_tag=PN289_06030;product=phage tail tube protein;protein_id=MDB8828205.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 13775 14875 . - . ID=gene-PN289_06035;Name=PN289_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06035 JAQMMZ010000011.1 Protein Homology CDS 13775 14875 . - 0 ID=cds-MDB8828206.1;Parent=gene-PN289_06035;Dbxref=NCBI_GP:MDB8828206.1;Name=MDB8828206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037565.2;locus_tag=PN289_06035;product=phage tail sheath C-terminal domain-containing protein;protein_id=MDB8828206.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 14875 15294 . - . ID=gene-PN289_06040;Name=PN289_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06040 JAQMMZ010000011.1 GeneMarkS-2+ CDS 14875 15294 . - 0 ID=cds-MDB8828207.1;Parent=gene-PN289_06040;Dbxref=NCBI_GP:MDB8828207.1;Name=MDB8828207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06040;product=hypothetical protein;protein_id=MDB8828207.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 15303 15698 . - . ID=gene-PN289_06045;Name=PN289_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06045 JAQMMZ010000011.1 GeneMarkS-2+ CDS 15303 15698 . - 0 ID=cds-MDB8828208.1;Parent=gene-PN289_06045;Dbxref=NCBI_GP:MDB8828208.1;Name=MDB8828208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06045;product=hypothetical protein;protein_id=MDB8828208.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 15691 16032 . - . ID=gene-PN289_06050;Name=PN289_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06050 JAQMMZ010000011.1 Protein Homology CDS 15691 16032 . - 0 ID=cds-MDB8828209.1;Parent=gene-PN289_06050;Dbxref=NCBI_GP:MDB8828209.1;Name=MDB8828209.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01563.1;locus_tag=PN289_06050;product=phage head closure protein;protein_id=MDB8828209.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 16035 16310 . - . ID=gene-PN289_06055;Name=PN289_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06055 JAQMMZ010000011.1 Protein Homology CDS 16035 16310 . - 0 ID=cds-MDB8828210.1;Parent=gene-PN289_06055;Dbxref=NCBI_GP:MDB8828210.1;Name=MDB8828210.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01560.2;locus_tag=PN289_06055;product=head-tail connector protein;protein_id=MDB8828210.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 16312 17544 . - . ID=gene-PN289_06060;Name=PN289_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06060 JAQMMZ010000011.1 Protein Homology CDS 16312 17544 . - 0 ID=cds-MDB8828211.1;Parent=gene-PN289_06060;Dbxref=NCBI_GP:MDB8828211.1;Name=MDB8828211.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01554.2;locus_tag=PN289_06060;product=phage major capsid protein;protein_id=MDB8828211.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 17558 18193 . - . ID=gene-PN289_06065;Name=PN289_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06065 JAQMMZ010000011.1 Protein Homology CDS 17558 18193 . - 0 ID=cds-MDB8828212.1;Parent=gene-PN289_06065;Dbxref=NCBI_GP:MDB8828212.1;Name=MDB8828212.1;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012063542.1;locus_tag=PN289_06065;product=HK97 family phage prohead protease;protein_id=MDB8828212.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 18171 19430 . - . ID=gene-PN289_06070;Name=PN289_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06070 JAQMMZ010000011.1 Protein Homology CDS 18171 19430 . - 0 ID=cds-MDB8828213.1;Parent=gene-PN289_06070;Dbxref=NCBI_GP:MDB8828213.1;Name=MDB8828213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474749.1;locus_tag=PN289_06070;product=phage portal protein;protein_id=MDB8828213.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 19488 19658 . - . ID=gene-PN289_06075;Name=PN289_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06075 JAQMMZ010000011.1 GeneMarkS-2+ CDS 19488 19658 . - 0 ID=cds-MDB8828214.1;Parent=gene-PN289_06075;Dbxref=NCBI_GP:MDB8828214.1;Name=MDB8828214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06075;product=hypothetical protein;protein_id=MDB8828214.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 19662 20381 . - . ID=gene-PN289_06080;Name=PN289_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06080 JAQMMZ010000011.1 Protein Homology CDS 19662 20381 . - 0 ID=cds-MDB8828215.1;Parent=gene-PN289_06080;Dbxref=NCBI_GP:MDB8828215.1;Name=MDB8828215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013291915.1;locus_tag=PN289_06080;product=ORF6C domain-containing protein;protein_id=MDB8828215.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 20500 20664 . - . ID=gene-PN289_06085;Name=PN289_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06085 JAQMMZ010000011.1 Protein Homology CDS 20500 20664 . - 0 ID=cds-MDB8828216.1;Parent=gene-PN289_06085;Dbxref=NCBI_GP:MDB8828216.1;Name=MDB8828216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788749.1;locus_tag=PN289_06085;product=CopG family transcriptional regulator;protein_id=MDB8828216.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 20765 22486 . - . ID=gene-PN289_06090;Name=PN289_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06090 JAQMMZ010000011.1 Protein Homology CDS 20765 22486 . - 0 ID=cds-MDB8828217.1;Parent=gene-PN289_06090;Dbxref=NCBI_GP:MDB8828217.1;Name=MDB8828217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008679558.1;locus_tag=PN289_06090;product=terminase large subunit;protein_id=MDB8828217.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 22473 22805 . - . ID=gene-PN289_06095;Name=PN289_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06095 JAQMMZ010000011.1 Protein Homology CDS 22473 22805 . - 0 ID=cds-MDB8828218.1;Parent=gene-PN289_06095;Dbxref=NCBI_GP:MDB8828218.1;Name=MDB8828218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008679559.1;locus_tag=PN289_06095;product=zinc-binding protein;protein_id=MDB8828218.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 22966 23649 . - . ID=gene-PN289_06100;Name=PN289_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06100 JAQMMZ010000011.1 Protein Homology CDS 22966 23649 . - 0 ID=cds-MDB8828219.1;Parent=gene-PN289_06100;Dbxref=NCBI_GP:MDB8828219.1;Name=MDB8828219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008679560.1;locus_tag=PN289_06100;product=HNH endonuclease signature motif containing protein;protein_id=MDB8828219.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 23649 24104 . - . ID=gene-PN289_06105;Name=PN289_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06105 JAQMMZ010000011.1 Protein Homology CDS 23649 24104 . - 0 ID=cds-MDB8828220.1;Parent=gene-PN289_06105;Dbxref=NCBI_GP:MDB8828220.1;Name=MDB8828220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013236739.1;locus_tag=PN289_06105;product=transposase;protein_id=MDB8828220.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 24309 24869 . - . ID=gene-PN289_06110;Name=PN289_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06110 JAQMMZ010000011.1 Protein Homology CDS 24309 24869 . - 0 ID=cds-MDB8828221.1;Parent=gene-PN289_06110;Dbxref=NCBI_GP:MDB8828221.1;Name=MDB8828221.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788351.1;locus_tag=PN289_06110;product=tyrosine-type recombinase/integrase;protein_id=MDB8828221.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 25062 25523 . - . ID=gene-PN289_06115;Name=PN289_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06115 JAQMMZ010000011.1 GeneMarkS-2+ CDS 25062 25523 . - 0 ID=cds-MDB8828222.1;Parent=gene-PN289_06115;Dbxref=NCBI_GP:MDB8828222.1;Name=MDB8828222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06115;product=hypothetical protein;protein_id=MDB8828222.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 25532 25729 . - . ID=gene-PN289_06120;Name=PN289_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06120 JAQMMZ010000011.1 GeneMarkS-2+ CDS 25532 25729 . - 0 ID=cds-MDB8828223.1;Parent=gene-PN289_06120;Dbxref=NCBI_GP:MDB8828223.1;Name=MDB8828223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06120;product=hypothetical protein;protein_id=MDB8828223.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 25707 26090 . - . ID=gene-PN289_06125;Name=PN289_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06125 JAQMMZ010000011.1 Protein Homology CDS 25707 26090 . - 0 ID=cds-MDB8828224.1;Parent=gene-PN289_06125;Dbxref=NCBI_GP:MDB8828224.1;Name=MDB8828224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842990.1;locus_tag=PN289_06125;product=single-stranded DNA-binding protein;protein_id=MDB8828224.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 26083 26298 . - . ID=gene-PN289_06130;Name=PN289_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06130 JAQMMZ010000011.1 GeneMarkS-2+ CDS 26083 26298 . - 0 ID=cds-MDB8828225.1;Parent=gene-PN289_06130;Dbxref=NCBI_GP:MDB8828225.1;Name=MDB8828225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06130;product=hypothetical protein;protein_id=MDB8828225.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 26309 26560 . - . ID=gene-PN289_06135;Name=PN289_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06135 JAQMMZ010000011.1 GeneMarkS-2+ CDS 26309 26560 . - 0 ID=cds-MDB8828226.1;Parent=gene-PN289_06135;Dbxref=NCBI_GP:MDB8828226.1;Name=MDB8828226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06135;product=hypothetical protein;protein_id=MDB8828226.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 26563 26769 . - . ID=gene-PN289_06140;Name=PN289_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06140 JAQMMZ010000011.1 GeneMarkS-2+ CDS 26563 26769 . - 0 ID=cds-MDB8828227.1;Parent=gene-PN289_06140;Dbxref=NCBI_GP:MDB8828227.1;Name=MDB8828227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06140;product=hypothetical protein;protein_id=MDB8828227.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 26779 28125 . - . ID=gene-PN289_06145;Name=PN289_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06145 JAQMMZ010000011.1 Protein Homology CDS 26779 28125 . - 0 ID=cds-MDB8828228.1;Parent=gene-PN289_06145;Dbxref=NCBI_GP:MDB8828228.1;Name=MDB8828228.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF015736.2;locus_tag=PN289_06145;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=MDB8828228.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 28106 28852 . - . ID=gene-PN289_06150;Name=PN289_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06150 JAQMMZ010000011.1 GeneMarkS-2+ CDS 28106 28852 . - 0 ID=cds-MDB8828229.1;Parent=gene-PN289_06150;Dbxref=NCBI_GP:MDB8828229.1;Name=MDB8828229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06150;product=hypothetical protein;protein_id=MDB8828229.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 28797 29066 . - . ID=gene-PN289_06155;Name=PN289_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06155 JAQMMZ010000011.1 GeneMarkS-2+ CDS 28797 29066 . - 0 ID=cds-MDB8828230.1;Parent=gene-PN289_06155;Dbxref=NCBI_GP:MDB8828230.1;Name=MDB8828230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06155;product=hypothetical protein;protein_id=MDB8828230.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 29066 29332 . - . ID=gene-PN289_06160;Name=PN289_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06160 JAQMMZ010000011.1 GeneMarkS-2+ CDS 29066 29332 . - 0 ID=cds-MDB8828231.1;Parent=gene-PN289_06160;Dbxref=NCBI_GP:MDB8828231.1;Name=MDB8828231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06160;product=hypothetical protein;protein_id=MDB8828231.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 29326 29532 . - . ID=gene-PN289_06165;Name=PN289_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06165 JAQMMZ010000011.1 GeneMarkS-2+ CDS 29326 29532 . - 0 ID=cds-MDB8828232.1;Parent=gene-PN289_06165;Dbxref=NCBI_GP:MDB8828232.1;Name=MDB8828232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06165;product=hypothetical protein;protein_id=MDB8828232.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 29537 29956 . - . ID=gene-PN289_06170;Name=PN289_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06170 JAQMMZ010000011.1 Protein Homology CDS 29537 29956 . - 0 ID=cds-MDB8828233.1;Parent=gene-PN289_06170;Dbxref=NCBI_GP:MDB8828233.1;Name=MDB8828233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=PN289_06170;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828233.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 30060 30296 . + . ID=gene-PN289_06175;Name=PN289_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06175 JAQMMZ010000011.1 GeneMarkS-2+ CDS 30060 30296 . + 0 ID=cds-MDB8828234.1;Parent=gene-PN289_06175;Dbxref=NCBI_GP:MDB8828234.1;Name=MDB8828234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06175;product=hypothetical protein;protein_id=MDB8828234.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 30293 30583 . - . ID=gene-PN289_06180;Name=PN289_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06180 JAQMMZ010000011.1 GeneMarkS-2+ CDS 30293 30583 . - 0 ID=cds-MDB8828235.1;Parent=gene-PN289_06180;Dbxref=NCBI_GP:MDB8828235.1;Name=MDB8828235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06180;product=hypothetical protein;protein_id=MDB8828235.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 30672 30914 . + . ID=gene-PN289_06185;Name=PN289_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06185 JAQMMZ010000011.1 GeneMarkS-2+ CDS 30672 30914 . + 0 ID=cds-MDB8828236.1;Parent=gene-PN289_06185;Dbxref=NCBI_GP:MDB8828236.1;Name=MDB8828236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06185;product=hypothetical protein;protein_id=MDB8828236.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 30909 31091 . - . ID=gene-PN289_06190;Name=PN289_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06190 JAQMMZ010000011.1 GeneMarkS-2+ CDS 30909 31091 . - 0 ID=cds-MDB8828237.1;Parent=gene-PN289_06190;Dbxref=NCBI_GP:MDB8828237.1;Name=MDB8828237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06190;product=hypothetical protein;protein_id=MDB8828237.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 31184 31372 . - . ID=gene-PN289_06195;Name=PN289_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06195 JAQMMZ010000011.1 Protein Homology CDS 31184 31372 . - 0 ID=cds-MDB8828238.1;Parent=gene-PN289_06195;Dbxref=NCBI_GP:MDB8828238.1;Name=MDB8828238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.2;locus_tag=PN289_06195;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828238.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 31534 31851 . + . ID=gene-PN289_06200;Name=PN289_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06200 JAQMMZ010000011.1 Protein Homology CDS 31534 31851 . + 0 ID=cds-MDB8828239.1;Parent=gene-PN289_06200;Dbxref=NCBI_GP:MDB8828239.1;Name=MDB8828239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015391096.1;locus_tag=PN289_06200;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828239.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 31867 32178 . + . ID=gene-PN289_06205;Name=PN289_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06205 JAQMMZ010000011.1 Protein Homology CDS 31867 32178 . + 0 ID=cds-MDB8828240.1;Parent=gene-PN289_06205;Dbxref=NCBI_GP:MDB8828240.1;Name=MDB8828240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788734.1;locus_tag=PN289_06205;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828240.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 32192 33208 . + . ID=gene-PN289_06210;Name=PN289_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06210 JAQMMZ010000011.1 Protein Homology CDS 32192 33208 . + 0 ID=cds-MDB8828241.1;Parent=gene-PN289_06210;Dbxref=NCBI_GP:MDB8828241.1;Name=MDB8828241.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:TIGR00573.1;locus_tag=PN289_06210;product=exonuclease domain-containing protein;protein_id=MDB8828241.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 33498 35051 . + . ID=gene-PN289_06215;Name=PN289_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06215 JAQMMZ010000011.1 Protein Homology CDS 33498 35051 . + 0 ID=cds-MDB8828242.1;Parent=gene-PN289_06215;Dbxref=NCBI_GP:MDB8828242.1;Name=MDB8828242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.2;locus_tag=PN289_06215;product=putative DNA binding domain-containing protein;protein_id=MDB8828242.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 35133 35669 . + . ID=gene-PN289_06220;Name=PN289_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06220 JAQMMZ010000011.1 GeneMarkS-2+ CDS 35133 35669 . + 0 ID=cds-MDB8828243.1;Parent=gene-PN289_06220;Dbxref=NCBI_GP:MDB8828243.1;Name=MDB8828243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06220;product=hypothetical protein;protein_id=MDB8828243.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 35656 36708 . + . ID=gene-PN289_06225;Name=PN289_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06225 JAQMMZ010000011.1 Protein Homology CDS 35656 36708 . + 0 ID=cds-MDB8828244.1;Parent=gene-PN289_06225;Dbxref=NCBI_GP:MDB8828244.1;Name=MDB8828244.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790464.1;locus_tag=PN289_06225;product=tyrosine-type recombinase/integrase;protein_id=MDB8828244.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 36717 37124 . + . ID=gene-PN289_06230;Name=PN289_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06230 JAQMMZ010000011.1 GeneMarkS-2+ CDS 36717 37124 . + 0 ID=cds-MDB8828245.1;Parent=gene-PN289_06230;Dbxref=NCBI_GP:MDB8828245.1;Name=MDB8828245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06230;product=hypothetical protein;protein_id=MDB8828245.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 37344 37736 . - . ID=gene-PN289_06235;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PN289_06235 JAQMMZ010000011.1 Protein Homology CDS 37344 37736 . - 0 ID=cds-MDB8828246.1;Parent=gene-PN289_06235;Dbxref=NCBI_GP:MDB8828246.1;Name=MDB8828246.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003515879.1;locus_tag=PN289_06235;product=30S ribosomal protein S9;protein_id=MDB8828246.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 37761 38192 . - . ID=gene-PN289_06240;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PN289_06240 JAQMMZ010000011.1 Protein Homology CDS 37761 38192 . - 0 ID=cds-MDB8828247.1;Parent=gene-PN289_06240;Dbxref=NCBI_GP:MDB8828247.1;Name=MDB8828247.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003435651.1;locus_tag=PN289_06240;product=50S ribosomal protein L13;protein_id=MDB8828247.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 38682 39572 . + . ID=gene-PN289_06245;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PN289_06245 JAQMMZ010000011.1 Protein Homology CDS 38682 39572 . + 0 ID=cds-MDB8828248.1;Parent=gene-PN289_06245;Dbxref=NCBI_GP:MDB8828248.1;Name=MDB8828248.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902642.1;locus_tag=PN289_06245;product=cysteine synthase A;protein_id=MDB8828248.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 39638 40234 . + . ID=gene-PN289_06250;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PN289_06250 JAQMMZ010000011.1 Protein Homology CDS 39638 40234 . + 0 ID=cds-MDB8828249.1;Parent=gene-PN289_06250;Dbxref=NCBI_GP:MDB8828249.1;Name=MDB8828249.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846064.1;locus_tag=PN289_06250;product=serine O-acetyltransferase;protein_id=MDB8828249.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 40701 41324 . - . ID=gene-PN289_06255;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PN289_06255 JAQMMZ010000011.1 Protein Homology CDS 40701 41324 . - 0 ID=cds-MDB8828250.1;Parent=gene-PN289_06255;Dbxref=NCBI_GP:MDB8828250.1;Name=MDB8828250.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844186.1;locus_tag=PN289_06255;product=uridine kinase;protein_id=MDB8828250.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 41583 44798 . - . ID=gene-PN289_06260;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PN289_06260 JAQMMZ010000011.1 Protein Homology CDS 41583 44798 . - 0 ID=cds-MDB8828251.1;Parent=gene-PN289_06260;Dbxref=NCBI_GP:MDB8828251.1;Name=MDB8828251.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844223.1;locus_tag=PN289_06260;product=carbamoyl-phosphate synthase large subunit;protein_id=MDB8828251.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 44811 45860 . - . ID=gene-PN289_06265;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=PN289_06265 JAQMMZ010000011.1 Protein Homology CDS 44811 45860 . - 0 ID=cds-MDB8828252.1;Parent=gene-PN289_06265;Dbxref=NCBI_GP:MDB8828252.1;Name=MDB8828252.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845470.1;locus_tag=PN289_06265;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=MDB8828252.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 45987 46712 . - . ID=gene-PN289_06270;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PN289_06270 JAQMMZ010000011.1 Protein Homology CDS 45987 46712 . - 0 ID=cds-MDB8828253.1;Parent=gene-PN289_06270;Dbxref=NCBI_GP:MDB8828253.1;Name=MDB8828253.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844218.1;locus_tag=PN289_06270;product=orotidine-5'-phosphate decarboxylase;protein_id=MDB8828253.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 47075 48238 . - . ID=gene-PN289_06275;Name=PN289_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06275 JAQMMZ010000011.1 Protein Homology CDS 47075 48238 . - 0 ID=cds-MDB8828254.1;Parent=gene-PN289_06275;Dbxref=NCBI_GP:MDB8828254.1;Name=MDB8828254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844209.1;locus_tag=PN289_06275;product=DUF2974 domain-containing protein;protein_id=MDB8828254.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 48247 50298 . - . ID=gene-PN289_06280;Name=PN289_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06280 JAQMMZ010000011.1 Protein Homology CDS 48247 50298 . - 0 ID=cds-MDB8828255.1;Parent=gene-PN289_06280;Dbxref=NCBI_GP:MDB8828255.1;Name=MDB8828255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844176.1;locus_tag=PN289_06280;product=cell wall-binding repeat-containing protein;protein_id=MDB8828255.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 50611 51354 . + . ID=gene-PN289_06285;Name=PN289_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06285 JAQMMZ010000011.1 Protein Homology CDS 50611 51354 . + 0 ID=cds-MDB8828256.1;Parent=gene-PN289_06285;Dbxref=NCBI_GP:MDB8828256.1;Name=MDB8828256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844180.1;locus_tag=PN289_06285;product=rhodanese-like domain-containing protein;protein_id=MDB8828256.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 51450 51896 . - . ID=gene-PN289_06290;Name=PN289_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06290 JAQMMZ010000011.1 Protein Homology CDS 51450 51896 . - 0 ID=cds-MDB8828257.1;Parent=gene-PN289_06290;Dbxref=NCBI_GP:MDB8828257.1;Name=MDB8828257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595381.1;locus_tag=PN289_06290;product=GNAT family N-acetyltransferase;protein_id=MDB8828257.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 51941 52210 . - . ID=gene-PN289_06295;Name=PN289_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06295 JAQMMZ010000011.1 Protein Homology CDS 51941 52210 . - 0 ID=cds-MDB8828258.1;Parent=gene-PN289_06295;Dbxref=NCBI_GP:MDB8828258.1;Name=MDB8828258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846018.1;locus_tag=PN289_06295;product=chorismate mutase;protein_id=MDB8828258.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 52229 53320 . - . ID=gene-PN289_06300;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PN289_06300 JAQMMZ010000011.1 Protein Homology CDS 52229 53320 . - 0 ID=cds-MDB8828259.1;Parent=gene-PN289_06300;Dbxref=NCBI_GP:MDB8828259.1;Name=MDB8828259.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844229.1;locus_tag=PN289_06300;product=chorismate synthase;protein_id=MDB8828259.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 53301 54665 . - . ID=gene-PN289_06305;Name=PN289_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06305 JAQMMZ010000011.1 Protein Homology CDS 53301 54665 . - 0 ID=cds-MDB8828260.1;Parent=gene-PN289_06305;Dbxref=NCBI_GP:MDB8828260.1;Name=MDB8828260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595382.1;locus_tag=PN289_06305;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MDB8828260.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 54677 55786 . - . ID=gene-PN289_06310;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PN289_06310 JAQMMZ010000011.1 Protein Homology CDS 54677 55786 . - 0 ID=cds-MDB8828261.1;Parent=gene-PN289_06310;Dbxref=NCBI_GP:MDB8828261.1;Name=MDB8828261.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844195.1;locus_tag=PN289_06310;product=3-dehydroquinate synthase;protein_id=MDB8828261.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 55795 56547 . - . ID=gene-PN289_06315;Name=PN289_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06315 JAQMMZ010000011.1 Protein Homology CDS 55795 56547 . - 0 ID=cds-MDB8828262.1;Parent=gene-PN289_06315;Dbxref=NCBI_GP:MDB8828262.1;Name=MDB8828262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.2;locus_tag=PN289_06315;product=DUF3169 family protein;protein_id=MDB8828262.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 56534 56755 . - . ID=gene-PN289_06320;Name=PN289_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06320 JAQMMZ010000011.1 Protein Homology CDS 56534 56755 . - 0 ID=cds-MDB8828263.1;Parent=gene-PN289_06320;Dbxref=NCBI_GP:MDB8828263.1;Name=MDB8828263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014079478.1;locus_tag=PN289_06320;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828263.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 57058 57867 . - . ID=gene-PN289_06325;Name=PN289_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06325 JAQMMZ010000011.1 Protein Homology CDS 57058 57867 . - 0 ID=cds-MDB8828264.1;Parent=gene-PN289_06325;Dbxref=NCBI_GP:MDB8828264.1;Name=MDB8828264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846014.1;locus_tag=PN289_06325;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8828264.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 57860 58729 . - . ID=gene-PN289_06330;Name=PN289_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06330 JAQMMZ010000011.1 Protein Homology CDS 57860 58729 . - 0 ID=cds-MDB8828265.1;Parent=gene-PN289_06330;Dbxref=NCBI_GP:MDB8828265.1;Name=MDB8828265.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844179.1;locus_tag=PN289_06330;product=energy-coupling factor transporter ATPase;protein_id=MDB8828265.1;transl_table=11 JAQMMZ010000011.1 Genbank gene 58714 59553 . - . ID=gene-PN289_06335;Name=PN289_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06335 JAQMMZ010000011.1 Protein Homology CDS 58714 59553 . - 0 ID=cds-MDB8828266.1;Parent=gene-PN289_06335;Dbxref=NCBI_GP:MDB8828266.1;Name=MDB8828266.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844188.1;locus_tag=PN289_06335;product=energy-coupling factor transporter ATPase;protein_id=MDB8828266.1;transl_table=11 ##sequence-region JAQMMZ010000012.1 1 57392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000012.1 Genbank region 1 57392 . + . ID=JAQMMZ010000012.1:1..57392;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000012.1 Genbank gene 1 4764 . - . ID=gene-PN289_06340;Name=PN289_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06340;partial=true;start_range=.,1 JAQMMZ010000012.1 Protein Homology CDS 1 4764 . - 0 ID=cds-MDB8828267.1;Parent=gene-PN289_06340;Dbxref=NCBI_GP:MDB8828267.1;Name=MDB8828267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019214826.1;locus_tag=PN289_06340;partial=true;product=InlB B-repeat-containing protein;protein_id=MDB8828267.1;start_range=.,1;transl_table=11 JAQMMZ010000012.1 Genbank gene 4936 5061 . - . ID=gene-PN289_06345;Name=PN289_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06345 JAQMMZ010000012.1 GeneMarkS-2+ CDS 4936 5061 . - 0 ID=cds-MDB8828268.1;Parent=gene-PN289_06345;Dbxref=NCBI_GP:MDB8828268.1;Name=MDB8828268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06345;product=hypothetical protein;protein_id=MDB8828268.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 5179 9954 . - . ID=gene-PN289_06350;Name=PN289_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06350 JAQMMZ010000012.1 Protein Homology CDS 5179 9954 . - 0 ID=cds-MDB8828269.1;Parent=gene-PN289_06350;Dbxref=NCBI_GP:MDB8828269.1;Name=MDB8828269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846371.1;locus_tag=PN289_06350;product=cell wall-binding repeat-containing protein;protein_id=MDB8828269.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 9976 17508 . - . ID=gene-PN289_06355;Name=PN289_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06355 JAQMMZ010000012.1 Protein Homology CDS 9976 17508 . - 0 ID=cds-MDB8828270.1;Parent=gene-PN289_06355;Dbxref=NCBI_GP:MDB8828270.1;Name=MDB8828270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.2;locus_tag=PN289_06355;product=Ig-like domain-containing protein;protein_id=MDB8828270.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 17598 22508 . - . ID=gene-PN289_06360;Name=PN289_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06360 JAQMMZ010000012.1 Protein Homology CDS 17598 22508 . - 0 ID=cds-MDB8828271.1;Parent=gene-PN289_06360;Dbxref=NCBI_GP:MDB8828271.1;Name=MDB8828271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595270.1;locus_tag=PN289_06360;product=hypothetical protein;protein_id=MDB8828271.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 23113 23444 . - . ID=gene-PN289_06365;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PN289_06365 JAQMMZ010000012.1 cmsearch RNase_P_RNA 23113 23444 . - . ID=rna-PN289_06365;Parent=gene-PN289_06365;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_06365;product=RNase P RNA component class A JAQMMZ010000012.1 cmsearch exon 23113 23444 . - . ID=exon-PN289_06365-1;Parent=rna-PN289_06365;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_06365;product=RNase P RNA component class A JAQMMZ010000012.1 Genbank gene 23488 24264 . - . ID=gene-PN289_06370;Name=PN289_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06370 JAQMMZ010000012.1 Protein Homology CDS 23488 24264 . - 0 ID=cds-MDB8828272.1;Parent=gene-PN289_06370;Dbxref=NCBI_GP:MDB8828272.1;Name=MDB8828272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843457.1;locus_tag=PN289_06370;product=glycoside hydrolase family 73 protein;protein_id=MDB8828272.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 24387 25445 . - . ID=gene-PN289_06375;Name=PN289_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06375 JAQMMZ010000012.1 Protein Homology CDS 24387 25445 . - 0 ID=cds-MDB8828273.1;Parent=gene-PN289_06375;Dbxref=NCBI_GP:MDB8828273.1;Name=MDB8828273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843447.1;locus_tag=PN289_06375;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=MDB8828273.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 25458 26237 . - . ID=gene-PN289_06380;Name=PN289_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06380 JAQMMZ010000012.1 Protein Homology CDS 25458 26237 . - 0 ID=cds-MDB8828274.1;Parent=gene-PN289_06380;Dbxref=NCBI_GP:MDB8828274.1;Name=MDB8828274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846538.1;locus_tag=PN289_06380;product=ABC transporter permease;protein_id=MDB8828274.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 26284 27153 . - . ID=gene-PN289_06385;Name=PN289_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06385 JAQMMZ010000012.1 Protein Homology CDS 26284 27153 . - 0 ID=cds-MDB8828275.1;Parent=gene-PN289_06385;Dbxref=NCBI_GP:MDB8828275.1;Name=MDB8828275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846539.1;locus_tag=PN289_06385;product=ABC transporter permease;protein_id=MDB8828275.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 27156 28199 . - . ID=gene-PN289_06390;Name=PN289_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06390 JAQMMZ010000012.1 Protein Homology CDS 27156 28199 . - 0 ID=cds-MDB8828276.1;Parent=gene-PN289_06390;Dbxref=NCBI_GP:MDB8828276.1;Name=MDB8828276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595272.1;locus_tag=PN289_06390;product=ABC transporter ATP-binding protein;protein_id=MDB8828276.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 28220 28759 . - . ID=gene-PN289_06395;Name=PN289_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06395 JAQMMZ010000012.1 Protein Homology CDS 28220 28759 . - 0 ID=cds-MDB8828277.1;Parent=gene-PN289_06395;Dbxref=NCBI_GP:MDB8828277.1;Name=MDB8828277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007286148.1;locus_tag=PN289_06395;product=XRE family transcriptional regulator;protein_id=MDB8828277.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 29237 30856 . - . ID=gene-PN289_06400;Name=PN289_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06400 JAQMMZ010000012.1 Protein Homology CDS 29237 30856 . - 0 ID=cds-MDB8828278.1;Parent=gene-PN289_06400;Dbxref=NCBI_GP:MDB8828278.1;Name=MDB8828278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595274.1;locus_tag=PN289_06400;product=cell wall-binding repeat-containing protein;protein_id=MDB8828278.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 31101 31877 . + . ID=gene-PN289_06405;Name=PN289_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06405 JAQMMZ010000012.1 Protein Homology CDS 31101 31877 . + 0 ID=cds-MDB8828279.1;Parent=gene-PN289_06405;Dbxref=NCBI_GP:MDB8828279.1;Name=MDB8828279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843455.1;locus_tag=PN289_06405;product=threonine/serine exporter family protein;protein_id=MDB8828279.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 31879 32568 . + . ID=gene-PN289_06410;Name=PN289_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06410 JAQMMZ010000012.1 Protein Homology CDS 31879 32568 . + 0 ID=cds-MDB8828280.1;Parent=gene-PN289_06410;Dbxref=NCBI_GP:MDB8828280.1;Name=MDB8828280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843450.1;locus_tag=PN289_06410;product=threonine/serine exporter family protein;protein_id=MDB8828280.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 32696 33661 . - . ID=gene-PN289_06415;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PN289_06415 JAQMMZ010000012.1 Protein Homology CDS 32696 33661 . - 0 ID=cds-MDB8828281.1;Parent=gene-PN289_06415;Dbxref=NCBI_GP:MDB8828281.1;Name=MDB8828281.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843460.1;locus_tag=PN289_06415;product=porphobilinogen synthase;protein_id=MDB8828281.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 33932 35086 . - . ID=gene-PN289_06420;Name=PN289_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06420 JAQMMZ010000012.1 Protein Homology CDS 33932 35086 . - 0 ID=cds-MDB8828282.1;Parent=gene-PN289_06420;Dbxref=NCBI_GP:MDB8828282.1;Name=MDB8828282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843461.1;locus_tag=PN289_06420;product=hypothetical protein;protein_id=MDB8828282.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 35575 36333 . - . ID=gene-PN289_06425;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PN289_06425 JAQMMZ010000012.1 Protein Homology CDS 35575 36333 . - 0 ID=cds-MDB8828283.1;Parent=gene-PN289_06425;Dbxref=NCBI_GP:MDB8828283.1;Name=MDB8828283.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790370.1;locus_tag=PN289_06425;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=MDB8828283.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 36370 36885 . - . ID=gene-PN289_06430;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PN289_06430 JAQMMZ010000012.1 Protein Homology CDS 36370 36885 . - 0 ID=cds-MDB8828284.1;Parent=gene-PN289_06430;Dbxref=NCBI_GP:MDB8828284.1;Name=MDB8828284.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844570.1;locus_tag=PN289_06430;product=ribosome maturation factor RimM;protein_id=MDB8828284.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 36959 37192 . - . ID=gene-PN289_06435;Name=PN289_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06435 JAQMMZ010000012.1 Protein Homology CDS 36959 37192 . - 0 ID=cds-MDB8828285.1;Parent=gene-PN289_06435;Dbxref=NCBI_GP:MDB8828285.1;Name=MDB8828285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844573.1;locus_tag=PN289_06435;product=KH domain-containing protein;protein_id=MDB8828285.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 37214 37465 . - . ID=gene-PN289_06440;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PN289_06440 JAQMMZ010000012.1 Protein Homology CDS 37214 37465 . - 0 ID=cds-MDB8828286.1;Parent=gene-PN289_06440;Dbxref=NCBI_GP:MDB8828286.1;Name=MDB8828286.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844564.1;locus_tag=PN289_06440;product=30S ribosomal protein S16;protein_id=MDB8828286.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 37641 38999 . - . ID=gene-PN289_06445;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PN289_06445 JAQMMZ010000012.1 Protein Homology CDS 37641 38999 . - 0 ID=cds-MDB8828287.1;Parent=gene-PN289_06445;Dbxref=NCBI_GP:MDB8828287.1;Name=MDB8828287.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844568.1;locus_tag=PN289_06445;product=signal recognition particle protein;protein_id=MDB8828287.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 38999 39352 . - . ID=gene-PN289_06450;Name=PN289_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06450 JAQMMZ010000012.1 Protein Homology CDS 38999 39352 . - 0 ID=cds-MDB8828288.1;Parent=gene-PN289_06450;Dbxref=NCBI_GP:MDB8828288.1;Name=MDB8828288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844569.1;locus_tag=PN289_06450;product=YlxM family DNA-binding protein;protein_id=MDB8828288.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 39610 40836 . - . ID=gene-PN289_06455;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PN289_06455 JAQMMZ010000012.1 Protein Homology CDS 39610 40836 . - 0 ID=cds-MDB8828289.1;Parent=gene-PN289_06455;Dbxref=NCBI_GP:MDB8828289.1;Name=MDB8828289.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846548.1;locus_tag=PN289_06455;product=signal recognition particle-docking protein FtsY;protein_id=MDB8828289.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 40845 44393 . - . ID=gene-PN289_06460;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=PN289_06460 JAQMMZ010000012.1 Protein Homology CDS 40845 44393 . - 0 ID=cds-MDB8828290.1;Parent=gene-PN289_06460;Dbxref=NCBI_GP:MDB8828290.1;Name=MDB8828290.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595280.1;locus_tag=PN289_06460;product=chromosome segregation protein SMC;protein_id=MDB8828290.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 44408 45550 . - . ID=gene-PN289_06465;Name=PN289_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06465 JAQMMZ010000012.1 Protein Homology CDS 44408 45550 . - 0 ID=cds-MDB8828291.1;Parent=gene-PN289_06465;Dbxref=NCBI_GP:MDB8828291.1;Name=MDB8828291.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846550.1;locus_tag=PN289_06465;product=radical SAM protein;protein_id=MDB8828291.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 45550 46260 . - . ID=gene-PN289_06470;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PN289_06470 JAQMMZ010000012.1 Protein Homology CDS 45550 46260 . - 0 ID=cds-MDB8828292.1;Parent=gene-PN289_06470;Dbxref=NCBI_GP:MDB8828292.1;Name=MDB8828292.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846551.1;locus_tag=PN289_06470;product=ribonuclease III;protein_id=MDB8828292.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 46341 46904 . - . ID=gene-PN289_06475;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PN289_06475 JAQMMZ010000012.1 Protein Homology CDS 46341 46904 . - 0 ID=cds-MDB8828293.1;Parent=gene-PN289_06475;Dbxref=NCBI_GP:MDB8828293.1;Name=MDB8828293.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844644.1;locus_tag=PN289_06475;product=elongation factor P;protein_id=MDB8828293.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 47205 48314 . - . ID=gene-PN289_06480;Name=PN289_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06480 JAQMMZ010000012.1 Protein Homology CDS 47205 48314 . - 0 ID=cds-MDB8828294.1;Parent=gene-PN289_06480;Dbxref=NCBI_GP:MDB8828294.1;Name=MDB8828294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014625.2;locus_tag=PN289_06480;product=PIG-L family deacetylase;protein_id=MDB8828294.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 49139 50014 . - . ID=gene-PN289_06485;Name=PN289_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06485 JAQMMZ010000012.1 Protein Homology CDS 49139 50014 . - 0 ID=cds-MDB8828295.1;Parent=gene-PN289_06485;Dbxref=NCBI_GP:MDB8828295.1;Name=MDB8828295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846556.1;locus_tag=PN289_06485;product=DMT family transporter;protein_id=MDB8828295.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 50121 54443 . - . ID=gene-PN289_06490;Name=PN289_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06490 JAQMMZ010000012.1 Protein Homology CDS 50121 54443 . - 0 ID=cds-MDB8828296.1;Parent=gene-PN289_06490;Dbxref=NCBI_GP:MDB8828296.1;Name=MDB8828296.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846557.1;locus_tag=PN289_06490;product=PolC-type DNA polymerase III;protein_id=MDB8828296.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 54504 55202 . - . ID=gene-PN289_06495;Name=PN289_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06495 JAQMMZ010000012.1 Protein Homology CDS 54504 55202 . - 0 ID=cds-MDB8828297.1;Parent=gene-PN289_06495;Dbxref=NCBI_GP:MDB8828297.1;Name=MDB8828297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844658.1;locus_tag=PN289_06495;product=MBL fold metallo-hydrolase;protein_id=MDB8828297.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 55414 56637 . + . ID=gene-PN289_06500;Name=PN289_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06500 JAQMMZ010000012.1 Protein Homology CDS 55414 56637 . + 0 ID=cds-MDB8828298.1;Parent=gene-PN289_06500;Dbxref=NCBI_GP:MDB8828298.1;Name=MDB8828298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844640.1;locus_tag=PN289_06500;product=hypothetical protein;protein_id=MDB8828298.1;transl_table=11 JAQMMZ010000012.1 Genbank gene 56778 57392 . - . ID=gene-PN289_06505;Name=PN289_06505;end_range=57392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06505;partial=true JAQMMZ010000012.1 Protein Homology CDS 56778 57392 . - 0 ID=cds-MDB8828299.1;Parent=gene-PN289_06505;Dbxref=NCBI_GP:MDB8828299.1;Name=MDB8828299.1;end_range=57392,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.2;locus_tag=PN289_06505;partial=true;product=transposase;protein_id=MDB8828299.1;transl_table=11 ##sequence-region JAQMMZ010000013.1 1 56578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000013.1 Genbank region 1 56578 . + . ID=JAQMMZ010000013.1:1..56578;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000013.1 Genbank gene 180 470 . + . ID=gene-PN289_06510;Name=PN289_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06510 JAQMMZ010000013.1 Protein Homology CDS 180 470 . + 0 ID=cds-MDB8828300.1;Parent=gene-PN289_06510;Dbxref=NCBI_GP:MDB8828300.1;Name=MDB8828300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025854.2;locus_tag=PN289_06510;product=GHKL domain-containing protein;protein_id=MDB8828300.1;transl_table=11 JAQMMZ010000013.1 Genbank pseudogene 576 722 . + . ID=gene-PN289_06515;Name=PN289_06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_06515;pseudo=true JAQMMZ010000013.1 Protein Homology CDS 576 722 . + 0 ID=cds-PN289_06515;Parent=gene-PN289_06515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844533.1;locus_tag=PN289_06515;product=transposase;pseudo=true;transl_table=11 JAQMMZ010000013.1 Genbank pseudogene 828 956 . + . ID=gene-PN289_06520;Name=PN289_06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_06520;pseudo=true JAQMMZ010000013.1 Protein Homology CDS 828 956 . + 0 ID=cds-PN289_06520;Parent=gene-PN289_06520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003513861.1;locus_tag=PN289_06520;product=transposase;pseudo=true;transl_table=11 JAQMMZ010000013.1 Genbank gene 1196 1804 . + . ID=gene-PN289_06525;Name=PN289_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06525 JAQMMZ010000013.1 Protein Homology CDS 1196 1804 . + 0 ID=cds-MDB8828301.1;Parent=gene-PN289_06525;Dbxref=NCBI_GP:MDB8828301.1;Name=MDB8828301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595416.1;locus_tag=PN289_06525;product=TetR/AcrR family transcriptional regulator;protein_id=MDB8828301.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 1791 3536 . + . ID=gene-PN289_06530;Name=PN289_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06530 JAQMMZ010000013.1 Protein Homology CDS 1791 3536 . + 0 ID=cds-MDB8828302.1;Parent=gene-PN289_06530;Dbxref=NCBI_GP:MDB8828302.1;Name=MDB8828302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843709.1;locus_tag=PN289_06530;product=ABC transporter ATP-binding protein;protein_id=MDB8828302.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 3529 5250 . + . ID=gene-PN289_06535;Name=PN289_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06535 JAQMMZ010000013.1 Protein Homology CDS 3529 5250 . + 0 ID=cds-MDB8828303.1;Parent=gene-PN289_06535;Dbxref=NCBI_GP:MDB8828303.1;Name=MDB8828303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007594185.1;locus_tag=PN289_06535;product=ABC transporter ATP-binding protein;protein_id=MDB8828303.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 5260 5841 . + . ID=gene-PN289_06540;Name=PN289_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06540 JAQMMZ010000013.1 Protein Homology CDS 5260 5841 . + 0 ID=cds-MDB8828304.1;Parent=gene-PN289_06540;Dbxref=NCBI_GP:MDB8828304.1;Name=MDB8828304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368966.1;locus_tag=PN289_06540;product=MptD family putative ECF transporter S component;protein_id=MDB8828304.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 5841 6527 . + . ID=gene-PN289_06545;Name=PN289_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06545 JAQMMZ010000013.1 Protein Homology CDS 5841 6527 . + 0 ID=cds-MDB8828305.1;Parent=gene-PN289_06545;Dbxref=NCBI_GP:MDB8828305.1;Name=MDB8828305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843701.1;locus_tag=PN289_06545;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8828305.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 6521 7906 . + . ID=gene-PN289_06550;Name=PN289_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06550 JAQMMZ010000013.1 Protein Homology CDS 6521 7906 . + 0 ID=cds-MDB8828306.1;Parent=gene-PN289_06550;Dbxref=NCBI_GP:MDB8828306.1;Name=MDB8828306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843712.1;locus_tag=PN289_06550;product=ABC transporter ATP-binding protein;protein_id=MDB8828306.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 7972 8382 . + . ID=gene-PN289_06555;Name=PN289_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06555 JAQMMZ010000013.1 Protein Homology CDS 7972 8382 . + 0 ID=cds-MDB8828307.1;Parent=gene-PN289_06555;Dbxref=NCBI_GP:MDB8828307.1;Name=MDB8828307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843705.1;locus_tag=PN289_06555;product=universal stress protein;protein_id=MDB8828307.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 8718 9266 . + . ID=gene-PN289_06560;Name=PN289_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06560 JAQMMZ010000013.1 Protein Homology CDS 8718 9266 . + 0 ID=cds-MDB8828308.1;Parent=gene-PN289_06560;Dbxref=NCBI_GP:MDB8828308.1;Name=MDB8828308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843693.1;locus_tag=PN289_06560;product=rubrerythrin family protein;protein_id=MDB8828308.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 9306 9683 . + . ID=gene-PN289_06565;Name=PN289_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06565 JAQMMZ010000013.1 Protein Homology CDS 9306 9683 . + 0 ID=cds-MDB8828309.1;Parent=gene-PN289_06565;Dbxref=NCBI_GP:MDB8828309.1;Name=MDB8828309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845267.1;locus_tag=PN289_06565;product=transcriptional repressor;protein_id=MDB8828309.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 9712 10083 . + . ID=gene-PN289_06570;Name=PN289_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06570 JAQMMZ010000013.1 Protein Homology CDS 9712 10083 . + 0 ID=cds-MDB8828310.1;Parent=gene-PN289_06570;Dbxref=NCBI_GP:MDB8828310.1;Name=MDB8828310.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843710.1;locus_tag=PN289_06570;product=desulfoferrodoxin family protein;protein_id=MDB8828310.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 10278 10985 . + . ID=gene-PN289_06575;Name=PN289_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06575 JAQMMZ010000013.1 Protein Homology CDS 10278 10985 . + 0 ID=cds-MDB8828311.1;Parent=gene-PN289_06575;Dbxref=NCBI_GP:MDB8828311.1;Name=MDB8828311.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845265.1;locus_tag=PN289_06575;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MDB8828311.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 11090 12088 . + . ID=gene-PN289_06580;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PN289_06580 JAQMMZ010000013.1 Protein Homology CDS 11090 12088 . + 0 ID=cds-MDB8828312.1;Parent=gene-PN289_06580;Dbxref=NCBI_GP:MDB8828312.1;Name=MDB8828312.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843688.1;locus_tag=PN289_06580;product=tryptophan--tRNA ligase;protein_id=MDB8828312.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 12289 15018 . + . ID=gene-PN289_06585;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=PN289_06585 JAQMMZ010000013.1 Protein Homology CDS 12289 15018 . + 0 ID=cds-MDB8828313.1;Parent=gene-PN289_06585;Dbxref=NCBI_GP:MDB8828313.1;Name=MDB8828313.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595414.1;locus_tag=PN289_06585;product=DNA polymerase I;protein_id=MDB8828313.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 15037 15651 . + . ID=gene-PN289_06590;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PN289_06590 JAQMMZ010000013.1 Protein Homology CDS 15037 15651 . + 0 ID=cds-MDB8828314.1;Parent=gene-PN289_06590;Dbxref=NCBI_GP:MDB8828314.1;Name=MDB8828314.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843698.1;locus_tag=PN289_06590;product=dephospho-CoA kinase;protein_id=MDB8828314.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 15670 16239 . + . ID=gene-PN289_06595;Name=PN289_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06595 JAQMMZ010000013.1 Protein Homology CDS 15670 16239 . + 0 ID=cds-MDB8828315.1;Parent=gene-PN289_06595;Dbxref=NCBI_GP:MDB8828315.1;Name=MDB8828315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845262.1;locus_tag=PN289_06595;product=lytic transglycosylase domain-containing protein;protein_id=MDB8828315.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 16594 17793 . + . ID=gene-PN289_06600;Name=PN289_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06600 JAQMMZ010000013.1 Protein Homology CDS 16594 17793 . + 0 ID=cds-MDB8828316.1;Parent=gene-PN289_06600;Dbxref=NCBI_GP:MDB8828316.1;Name=MDB8828316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845261.1;locus_tag=PN289_06600;product=SH3 domain-containing protein;protein_id=MDB8828316.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 17906 18355 . + . ID=gene-PN289_06605;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PN289_06605 JAQMMZ010000013.1 Protein Homology CDS 17906 18355 . + 0 ID=cds-MDB8828317.1;Parent=gene-PN289_06605;Dbxref=NCBI_GP:MDB8828317.1;Name=MDB8828317.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842673.1;locus_tag=PN289_06605;product=signal peptidase II;protein_id=MDB8828317.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 18355 19317 . + . ID=gene-PN289_06610;Name=PN289_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06610 JAQMMZ010000013.1 Protein Homology CDS 18355 19317 . + 0 ID=cds-MDB8828318.1;Parent=gene-PN289_06610;Dbxref=NCBI_GP:MDB8828318.1;Name=MDB8828318.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842668.1;locus_tag=PN289_06610;product=RluA family pseudouridine synthase;protein_id=MDB8828318.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 19351 19881 . + . ID=gene-PN289_06615;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=PN289_06615 JAQMMZ010000013.1 Protein Homology CDS 19351 19881 . + 0 ID=cds-MDB8828319.1;Parent=gene-PN289_06615;Dbxref=NCBI_GP:MDB8828319.1;Name=MDB8828319.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845258.1;locus_tag=PN289_06615;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=MDB8828319.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 19914 21680 . + . ID=gene-PN289_06620;Name=PN289_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06620 JAQMMZ010000013.1 Protein Homology CDS 19914 21680 . + 0 ID=cds-MDB8828320.1;Parent=gene-PN289_06620;Dbxref=NCBI_GP:MDB8828320.1;Name=MDB8828320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845256.1;locus_tag=PN289_06620;product=NFACT RNA binding domain-containing protein;protein_id=MDB8828320.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 21708 22532 . + . ID=gene-PN289_06625;Name=PN289_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06625 JAQMMZ010000013.1 Protein Homology CDS 21708 22532 . + 0 ID=cds-MDB8828321.1;Parent=gene-PN289_06625;Dbxref=NCBI_GP:MDB8828321.1;Name=MDB8828321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842669.1;locus_tag=PN289_06625;product=alpha/beta hydrolase;protein_id=MDB8828321.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 22584 23465 . + . ID=gene-PN289_06630;Name=PN289_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06630 JAQMMZ010000013.1 Protein Homology CDS 22584 23465 . + 0 ID=cds-MDB8828322.1;Parent=gene-PN289_06630;Dbxref=NCBI_GP:MDB8828322.1;Name=MDB8828322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842693.1;locus_tag=PN289_06630;product=YicC family protein;protein_id=MDB8828322.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 23476 24102 . + . ID=gene-PN289_06635;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=PN289_06635 JAQMMZ010000013.1 Protein Homology CDS 23476 24102 . + 0 ID=cds-MDB8828323.1;Parent=gene-PN289_06635;Dbxref=NCBI_GP:MDB8828323.1;Name=MDB8828323.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842712.1;locus_tag=PN289_06635;product=guanylate kinase;protein_id=MDB8828323.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 24096 24362 . + . ID=gene-PN289_06640;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PN289_06640 JAQMMZ010000013.1 Protein Homology CDS 24096 24362 . + 0 ID=cds-MDB8828324.1;Parent=gene-PN289_06640;Dbxref=NCBI_GP:MDB8828324.1;Name=MDB8828324.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842682.1;locus_tag=PN289_06640;product=DNA-directed RNA polymerase subunit omega;protein_id=MDB8828324.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 24438 25643 . + . ID=gene-PN289_06645;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PN289_06645 JAQMMZ010000013.1 Protein Homology CDS 24438 25643 . + 0 ID=cds-MDB8828325.1;Parent=gene-PN289_06645;Dbxref=NCBI_GP:MDB8828325.1;Name=MDB8828325.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845252.1;locus_tag=PN289_06645;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=MDB8828325.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 25697 28306 . + . ID=gene-PN289_06650;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PN289_06650 JAQMMZ010000013.1 Protein Homology CDS 25697 28306 . + 0 ID=cds-MDB8828326.1;Parent=gene-PN289_06650;Dbxref=NCBI_GP:MDB8828326.1;Name=MDB8828326.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595413.1;locus_tag=PN289_06650;product=primosomal protein N';protein_id=MDB8828326.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 28326 28775 . + . ID=gene-PN289_06655;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PN289_06655 JAQMMZ010000013.1 Protein Homology CDS 28326 28775 . + 0 ID=cds-MDB8828327.1;Parent=gene-PN289_06655;Dbxref=NCBI_GP:MDB8828327.1;Name=MDB8828327.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842667.1;locus_tag=PN289_06655;product=peptide deformylase;protein_id=MDB8828327.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 28775 29704 . + . ID=gene-PN289_06660;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PN289_06660 JAQMMZ010000013.1 Protein Homology CDS 28775 29704 . + 0 ID=cds-MDB8828328.1;Parent=gene-PN289_06660;Dbxref=NCBI_GP:MDB8828328.1;Name=MDB8828328.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842724.1;locus_tag=PN289_06660;product=methionyl-tRNA formyltransferase;protein_id=MDB8828328.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 29717 30409 . + . ID=gene-PN289_06665;Name=PN289_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06665 JAQMMZ010000013.1 Protein Homology CDS 29717 30409 . + 0 ID=cds-MDB8828329.1;Parent=gene-PN289_06665;Dbxref=NCBI_GP:MDB8828329.1;Name=MDB8828329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595412.1;locus_tag=PN289_06665;product=zinc metallopeptidase;protein_id=MDB8828329.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 30490 31830 . + . ID=gene-PN289_06670;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PN289_06670 JAQMMZ010000013.1 Protein Homology CDS 30490 31830 . + 0 ID=cds-MDB8828330.1;Parent=gene-PN289_06670;Dbxref=NCBI_GP:MDB8828330.1;Name=MDB8828330.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595575.1;locus_tag=PN289_06670;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=MDB8828330.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 31853 32911 . + . ID=gene-PN289_06675;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=PN289_06675 JAQMMZ010000013.1 Protein Homology CDS 31853 32911 . + 0 ID=cds-MDB8828331.1;Parent=gene-PN289_06675;Dbxref=NCBI_GP:MDB8828331.1;Name=MDB8828331.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846034.1;locus_tag=PN289_06675;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=MDB8828331.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 32913 33662 . + . ID=gene-PN289_06680;Name=PN289_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06680 JAQMMZ010000013.1 Protein Homology CDS 32913 33662 . + 0 ID=cds-MDB8828332.1;Parent=gene-PN289_06680;Dbxref=NCBI_GP:MDB8828332.1;Name=MDB8828332.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842717.1;locus_tag=PN289_06680;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=MDB8828332.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 33675 35561 . + . ID=gene-PN289_06685;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=PN289_06685 JAQMMZ010000013.1 Protein Homology CDS 33675 35561 . + 0 ID=cds-MDB8828333.1;Parent=gene-PN289_06685;Dbxref=NCBI_GP:MDB8828333.1;Name=MDB8828333.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846036.1;locus_tag=PN289_06685;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=MDB8828333.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 35666 36403 . + . ID=gene-PN289_06690;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PN289_06690 JAQMMZ010000013.1 Protein Homology CDS 35666 36403 . + 0 ID=cds-MDB8828334.1;Parent=gene-PN289_06690;Dbxref=NCBI_GP:MDB8828334.1;Name=MDB8828334.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846037.1;locus_tag=PN289_06690;product=3-oxoacyl-ACP reductase FabG;protein_id=MDB8828334.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 36512 37405 . + . ID=gene-PN289_06695;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PN289_06695 JAQMMZ010000013.1 Protein Homology CDS 36512 37405 . + 0 ID=cds-MDB8828335.1;Parent=gene-PN289_06695;Dbxref=NCBI_GP:MDB8828335.1;Name=MDB8828335.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842709.1;locus_tag=PN289_06695;product=ribosome small subunit-dependent GTPase A;protein_id=MDB8828335.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 37405 38064 . + . ID=gene-PN289_06700;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PN289_06700 JAQMMZ010000013.1 Protein Homology CDS 37405 38064 . + 0 ID=cds-MDB8828336.1;Parent=gene-PN289_06700;Dbxref=NCBI_GP:MDB8828336.1;Name=MDB8828336.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842714.1;locus_tag=PN289_06700;product=ribulose-phosphate 3-epimerase;protein_id=MDB8828336.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 38074 38730 . + . ID=gene-PN289_06705;Name=PN289_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06705 JAQMMZ010000013.1 Protein Homology CDS 38074 38730 . + 0 ID=cds-MDB8828337.1;Parent=gene-PN289_06705;Dbxref=NCBI_GP:MDB8828337.1;Name=MDB8828337.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842720.1;locus_tag=PN289_06705;product=thiamine diphosphokinase;protein_id=MDB8828337.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 38744 39457 . + . ID=gene-PN289_06710;Name=PN289_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06710 JAQMMZ010000013.1 Protein Homology CDS 38744 39457 . + 0 ID=cds-MDB8828338.1;Parent=gene-PN289_06710;Dbxref=NCBI_GP:MDB8828338.1;Name=MDB8828338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842684.1;locus_tag=PN289_06710;product=response regulator transcription factor;protein_id=MDB8828338.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 39432 41813 . + . ID=gene-PN289_06715;Name=PN289_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06715 JAQMMZ010000013.1 Protein Homology CDS 39432 41813 . + 0 ID=cds-MDB8828339.1;Parent=gene-PN289_06715;Dbxref=NCBI_GP:MDB8828339.1;Name=MDB8828339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846041.1;locus_tag=PN289_06715;product=HAMP domain-containing sensor histidine kinase;protein_id=MDB8828339.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 42003 42191 . - . ID=gene-PN289_06720;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PN289_06720 JAQMMZ010000013.1 Protein Homology CDS 42003 42191 . - 0 ID=cds-MDB8828340.1;Parent=gene-PN289_06720;Dbxref=NCBI_GP:MDB8828340.1;Name=MDB8828340.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416297.1;locus_tag=PN289_06720;product=50S ribosomal protein L28;protein_id=MDB8828340.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 42409 42759 . + . ID=gene-PN289_06725;Name=PN289_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06725 JAQMMZ010000013.1 Protein Homology CDS 42409 42759 . + 0 ID=cds-MDB8828341.1;Parent=gene-PN289_06725;Dbxref=NCBI_GP:MDB8828341.1;Name=MDB8828341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842710.1;locus_tag=PN289_06725;product=Asp23/Gls24 family envelope stress response protein;protein_id=MDB8828341.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 42774 44456 . + . ID=gene-PN289_06730;Name=PN289_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06730 JAQMMZ010000013.1 Protein Homology CDS 42774 44456 . + 0 ID=cds-MDB8828342.1;Parent=gene-PN289_06730;Dbxref=NCBI_GP:MDB8828342.1;Name=MDB8828342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846042.1;locus_tag=PN289_06730;product=DAK2 domain-containing protein;protein_id=MDB8828342.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 44515 46572 . + . ID=gene-PN289_06735;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PN289_06735 JAQMMZ010000013.1 Protein Homology CDS 44515 46572 . + 0 ID=cds-MDB8828343.1;Parent=gene-PN289_06735;Dbxref=NCBI_GP:MDB8828343.1;Name=MDB8828343.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842671.1;locus_tag=PN289_06735;product=ATP-dependent DNA helicase RecG;protein_id=MDB8828343.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 46650 47210 . + . ID=gene-PN289_06740;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PN289_06740 JAQMMZ010000013.1 Protein Homology CDS 46650 47210 . + 0 ID=cds-MDB8828344.1;Parent=gene-PN289_06740;Dbxref=NCBI_GP:MDB8828344.1;Name=MDB8828344.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846045.1;locus_tag=PN289_06740;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=MDB8828344.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 47203 47700 . + . ID=gene-PN289_06745;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PN289_06745 JAQMMZ010000013.1 Protein Homology CDS 47203 47700 . + 0 ID=cds-MDB8828345.1;Parent=gene-PN289_06745;Dbxref=NCBI_GP:MDB8828345.1;Name=MDB8828345.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842722.1;locus_tag=PN289_06745;product=pantetheine-phosphate adenylyltransferase;protein_id=MDB8828345.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 47794 48339 . + . ID=gene-PN289_06750;Name=PN289_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06750 JAQMMZ010000013.1 Protein Homology CDS 47794 48339 . + 0 ID=cds-MDB8828346.1;Parent=gene-PN289_06750;Dbxref=NCBI_GP:MDB8828346.1;Name=MDB8828346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842675.1;locus_tag=PN289_06750;product=permease;protein_id=MDB8828346.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 48386 49705 . + . ID=gene-PN289_06755;Name=PN289_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06755 JAQMMZ010000013.1 Protein Homology CDS 48386 49705 . + 0 ID=cds-MDB8828347.1;Parent=gene-PN289_06755;Dbxref=NCBI_GP:MDB8828347.1;Name=MDB8828347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595572.1;locus_tag=PN289_06755;product=nucleotidyltransferase;protein_id=MDB8828347.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 49776 50972 . + . ID=gene-PN289_06760;Name=PN289_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06760 JAQMMZ010000013.1 Protein Homology CDS 49776 50972 . + 0 ID=cds-MDB8828348.1;Parent=gene-PN289_06760;Dbxref=NCBI_GP:MDB8828348.1;Name=MDB8828348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419109.1;locus_tag=PN289_06760;product=acetate kinase;protein_id=MDB8828348.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 51171 51692 . + . ID=gene-PN289_06765;Name=PN289_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06765 JAQMMZ010000013.1 Protein Homology CDS 51171 51692 . + 0 ID=cds-MDB8828349.1;Parent=gene-PN289_06765;Dbxref=NCBI_GP:MDB8828349.1;Name=MDB8828349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842670.1;locus_tag=PN289_06765;product=DUF177 domain-containing protein;protein_id=MDB8828349.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 51710 51889 . + . ID=gene-PN289_06770;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PN289_06770 JAQMMZ010000013.1 Protein Homology CDS 51710 51889 . + 0 ID=cds-MDB8828350.1;Parent=gene-PN289_06770;Dbxref=NCBI_GP:MDB8828350.1;Name=MDB8828350.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790120.1;locus_tag=PN289_06770;product=50S ribosomal protein L32;protein_id=MDB8828350.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 52164 52415 . + . ID=gene-PN289_06775;Name=PN289_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06775 JAQMMZ010000013.1 Protein Homology CDS 52164 52415 . + 0 ID=cds-MDB8828351.1;Parent=gene-PN289_06775;Dbxref=NCBI_GP:MDB8828351.1;Name=MDB8828351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842719.1;locus_tag=PN289_06775;product=GNAT family N-acetyltransferase;protein_id=MDB8828351.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 52535 53545 . + . ID=gene-PN289_06780;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PN289_06780 JAQMMZ010000013.1 Protein Homology CDS 52535 53545 . + 0 ID=cds-MDB8828352.1;Parent=gene-PN289_06780;Dbxref=NCBI_GP:MDB8828352.1;Name=MDB8828352.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842721.1;locus_tag=PN289_06780;product=phosphate acyltransferase PlsX;protein_id=MDB8828352.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 53572 55548 . + . ID=gene-PN289_06785;Name=PN289_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06785 JAQMMZ010000013.1 Protein Homology CDS 53572 55548 . + 0 ID=cds-MDB8828353.1;Parent=gene-PN289_06785;Dbxref=NCBI_GP:MDB8828353.1;Name=MDB8828353.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842713.1;locus_tag=PN289_06785;product=fructose-bisphosphatase class III;protein_id=MDB8828353.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 55609 55947 . + . ID=gene-PN289_06790;Name=PN289_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06790 JAQMMZ010000013.1 Protein Homology CDS 55609 55947 . + 0 ID=cds-MDB8828354.1;Parent=gene-PN289_06790;Dbxref=NCBI_GP:MDB8828354.1;Name=MDB8828354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842666.1;locus_tag=PN289_06790;product=Asp23/Gls24 family envelope stress response protein;protein_id=MDB8828354.1;transl_table=11 JAQMMZ010000013.1 Genbank gene 55940 56434 . + . ID=gene-PN289_06795;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PN289_06795 JAQMMZ010000013.1 Protein Homology CDS 55940 56434 . + 0 ID=cds-MDB8828355.1;Parent=gene-PN289_06795;Dbxref=NCBI_GP:MDB8828355.1;Name=MDB8828355.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842685.1;locus_tag=PN289_06795;product=transcription antitermination factor NusB;protein_id=MDB8828355.1;transl_table=11 ##sequence-region JAQMMZ010000014.1 1 53322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000014.1 Genbank region 1 53322 . + . ID=JAQMMZ010000014.1:1..53322;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000014.1 Genbank gene 405 662 . - . ID=gene-PN289_06800;Name=PN289_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06800 JAQMMZ010000014.1 Protein Homology CDS 405 662 . - 0 ID=cds-MDB8828356.1;Parent=gene-PN289_06800;Dbxref=NCBI_GP:MDB8828356.1;Name=MDB8828356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024932.2;locus_tag=PN289_06800;product=helix-turn-helix domain-containing protein;protein_id=MDB8828356.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 747 896 . - . ID=gene-PN289_06805;Name=PN289_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06805 JAQMMZ010000014.1 GeneMarkS-2+ CDS 747 896 . - 0 ID=cds-MDB8828357.1;Parent=gene-PN289_06805;Dbxref=NCBI_GP:MDB8828357.1;Name=MDB8828357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_06805;product=hypothetical protein;protein_id=MDB8828357.1;transl_table=11 JAQMMZ010000014.1 Genbank direct_repeat 1043 2925 . + . ID=id-JAQMMZ010000014.1:1043..2925;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1109..1144;rpt_unit_seq=gttttgtcactatataaaattacatcactctcaaac JAQMMZ010000014.1 Genbank gene 3000 3671 . - . ID=gene-PN289_06810;Name=csn2;gbkey=Gene;gene=csn2;gene_biotype=protein_coding;locus_tag=PN289_06810 JAQMMZ010000014.1 Protein Homology CDS 3000 3671 . - 0 ID=cds-MDB8828358.1;Parent=gene-PN289_06810;Dbxref=NCBI_GP:MDB8828358.1;Name=MDB8828358.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csn2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01866.1;locus_tag=PN289_06810;product=type II-A CRISPR-associated protein Csn2;protein_id=MDB8828358.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 3668 3988 . - . ID=gene-PN289_06815;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=PN289_06815 JAQMMZ010000014.1 Protein Homology CDS 3668 3988 . - 0 ID=cds-MDB8828359.1;Parent=gene-PN289_06815;Dbxref=NCBI_GP:MDB8828359.1;Name=MDB8828359.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007156590.1;locus_tag=PN289_06815;product=CRISPR-associated endonuclease Cas2;protein_id=MDB8828359.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 3978 4853 . - . ID=gene-PN289_06820;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=PN289_06820 JAQMMZ010000014.1 Protein Homology CDS 3978 4853 . - 0 ID=cds-MDB8828360.1;Parent=gene-PN289_06820;Dbxref=NCBI_GP:MDB8828360.1;Name=MDB8828360.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609676.1;locus_tag=PN289_06820;product=type II CRISPR-associated endonuclease Cas1;protein_id=MDB8828360.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 4865 9028 . - . ID=gene-PN289_06825;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;locus_tag=PN289_06825 JAQMMZ010000014.1 Protein Homology CDS 4865 9028 . - 0 ID=cds-MDB8828361.1;Parent=gene-PN289_06825;Dbxref=NCBI_GP:MDB8828361.1;Name=MDB8828361.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520,GO:0005575;gbkey=CDS;gene=cas9;go_component=cellular_component|0005575||IEA;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01865.1;locus_tag=PN289_06825;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=MDB8828361.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 9496 9942 . - . ID=gene-PN289_06830;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PN289_06830 JAQMMZ010000014.1 Protein Homology CDS 9496 9942 . - 0 ID=cds-MDB8828362.1;Parent=gene-PN289_06830;Dbxref=NCBI_GP:MDB8828362.1;Name=MDB8828362.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844155.1;locus_tag=PN289_06830;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=MDB8828362.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 9957 11192 . - . ID=gene-PN289_06835;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PN289_06835 JAQMMZ010000014.1 Protein Homology CDS 9957 11192 . - 0 ID=cds-MDB8828363.1;Parent=gene-PN289_06835;Dbxref=NCBI_GP:MDB8828363.1;Name=MDB8828363.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844134.1;locus_tag=PN289_06835;product=beta-ketoacyl-ACP synthase II;protein_id=MDB8828363.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 11215 11961 . - . ID=gene-PN289_06840;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PN289_06840 JAQMMZ010000014.1 Protein Homology CDS 11215 11961 . - 0 ID=cds-MDB8828364.1;Parent=gene-PN289_06840;Dbxref=NCBI_GP:MDB8828364.1;Name=MDB8828364.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167277.1;locus_tag=PN289_06840;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=MDB8828364.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 11977 12909 . - . ID=gene-PN289_06845;Name=PN289_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06845 JAQMMZ010000014.1 Protein Homology CDS 11977 12909 . - 0 ID=cds-MDB8828365.1;Parent=gene-PN289_06845;Dbxref=NCBI_GP:MDB8828365.1;Name=MDB8828365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167276.1;locus_tag=PN289_06845;product=ACP S-malonyltransferase;protein_id=MDB8828365.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 12902 13855 . - . ID=gene-PN289_06850;Name=PN289_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06850 JAQMMZ010000014.1 Protein Homology CDS 12902 13855 . - 0 ID=cds-MDB8828366.1;Parent=gene-PN289_06850;Dbxref=NCBI_GP:MDB8828366.1;Name=MDB8828366.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167275.1;locus_tag=PN289_06850;product=nitronate monooxygenase;protein_id=MDB8828366.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 13855 14085 . - . ID=gene-PN289_06855;Name=PN289_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06855 JAQMMZ010000014.1 Protein Homology CDS 13855 14085 . - 0 ID=cds-MDB8828367.1;Parent=gene-PN289_06855;Dbxref=NCBI_GP:MDB8828367.1;Name=MDB8828367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167274.1;locus_tag=PN289_06855;product=acyl carrier protein;protein_id=MDB8828367.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 14248 15258 . - . ID=gene-PN289_06860;Name=PN289_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06860 JAQMMZ010000014.1 Protein Homology CDS 14248 15258 . - 0 ID=cds-MDB8828368.1;Parent=gene-PN289_06860;Dbxref=NCBI_GP:MDB8828368.1;Name=MDB8828368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167273.1;locus_tag=PN289_06860;product=ketoacyl-ACP synthase III;protein_id=MDB8828368.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 15248 15937 . - . ID=gene-PN289_06865;Name=PN289_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06865 JAQMMZ010000014.1 Protein Homology CDS 15248 15937 . - 0 ID=cds-MDB8828369.1;Parent=gene-PN289_06865;Dbxref=NCBI_GP:MDB8828369.1;Name=MDB8828369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167271.1;locus_tag=PN289_06865;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=MDB8828369.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 15952 16695 . - . ID=gene-PN289_06870;Name=PN289_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06870 JAQMMZ010000014.1 Protein Homology CDS 15952 16695 . - 0 ID=cds-MDB8828370.1;Parent=gene-PN289_06870;Dbxref=NCBI_GP:MDB8828370.1;Name=MDB8828370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844139.1;locus_tag=PN289_06870;product=carboxyl transferase domain-containing protein;protein_id=MDB8828370.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 16756 17616 . - . ID=gene-PN289_06875;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=PN289_06875 JAQMMZ010000014.1 Protein Homology CDS 16756 17616 . - 0 ID=cds-MDB8828371.1;Parent=gene-PN289_06875;Dbxref=NCBI_GP:MDB8828371.1;Name=MDB8828371.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844154.1;locus_tag=PN289_06875;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=MDB8828371.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 17619 18968 . - . ID=gene-PN289_06880;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PN289_06880 JAQMMZ010000014.1 Protein Homology CDS 17619 18968 . - 0 ID=cds-MDB8828372.1;Parent=gene-PN289_06880;Dbxref=NCBI_GP:MDB8828372.1;Name=MDB8828372.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844137.1;locus_tag=PN289_06880;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=MDB8828372.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 18970 19512 . - . ID=gene-PN289_06885;Name=PN289_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06885 JAQMMZ010000014.1 Protein Homology CDS 18970 19512 . - 0 ID=cds-MDB8828373.1;Parent=gene-PN289_06885;Dbxref=NCBI_GP:MDB8828373.1;Name=MDB8828373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844146.1;locus_tag=PN289_06885;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=MDB8828373.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 19686 20594 . - . ID=gene-PN289_06890;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PN289_06890 JAQMMZ010000014.1 Protein Homology CDS 19686 20594 . - 0 ID=cds-MDB8828374.1;Parent=gene-PN289_06890;Dbxref=NCBI_GP:MDB8828374.1;Name=MDB8828374.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844159.1;locus_tag=PN289_06890;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=MDB8828374.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 21240 21473 . - . ID=gene-PN289_06895;Name=PN289_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06895 JAQMMZ010000014.1 Protein Homology CDS 21240 21473 . - 0 ID=cds-MDB8828375.1;Parent=gene-PN289_06895;Dbxref=NCBI_GP:MDB8828375.1;Name=MDB8828375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844168.1;locus_tag=PN289_06895;product=hypothetical protein;protein_id=MDB8828375.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 21487 22047 . - . ID=gene-PN289_06900;Name=PN289_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06900 JAQMMZ010000014.1 Protein Homology CDS 21487 22047 . - 0 ID=cds-MDB8828376.1;Parent=gene-PN289_06900;Dbxref=NCBI_GP:MDB8828376.1;Name=MDB8828376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595499.1;locus_tag=PN289_06900;product=hypothetical protein;protein_id=MDB8828376.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 22062 22199 . - . ID=gene-PN289_06905;Name=PN289_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06905 JAQMMZ010000014.1 Protein Homology CDS 22062 22199 . - 0 ID=cds-MDB8828377.1;Parent=gene-PN289_06905;Dbxref=NCBI_GP:MDB8828377.1;Name=MDB8828377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844161.1;locus_tag=PN289_06905;product=terminase;protein_id=MDB8828377.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 22546 23256 . + . ID=gene-PN289_06910;Name=PN289_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06910 JAQMMZ010000014.1 Protein Homology CDS 22546 23256 . + 0 ID=cds-MDB8828378.1;Parent=gene-PN289_06910;Dbxref=NCBI_GP:MDB8828378.1;Name=MDB8828378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844124.1;locus_tag=PN289_06910;product=AzlC family ABC transporter permease;protein_id=MDB8828378.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 23246 23569 . + . ID=gene-PN289_06915;Name=PN289_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06915 JAQMMZ010000014.1 Protein Homology CDS 23246 23569 . + 0 ID=cds-MDB8828379.1;Parent=gene-PN289_06915;Dbxref=NCBI_GP:MDB8828379.1;Name=MDB8828379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844165.1;locus_tag=PN289_06915;product=AzlD domain-containing protein;protein_id=MDB8828379.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 23657 23857 . - . ID=gene-PN289_06920;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PN289_06920 JAQMMZ010000014.1 Protein Homology CDS 23657 23857 . - 0 ID=cds-MDB8828380.1;Parent=gene-PN289_06920;Dbxref=NCBI_GP:MDB8828380.1;Name=MDB8828380.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018591942.1;locus_tag=PN289_06920;product=50S ribosomal protein L31;protein_id=MDB8828380.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 23981 24928 . - . ID=gene-PN289_06925;Name=PN289_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06925 JAQMMZ010000014.1 Protein Homology CDS 23981 24928 . - 0 ID=cds-MDB8828381.1;Parent=gene-PN289_06925;Dbxref=NCBI_GP:MDB8828381.1;Name=MDB8828381.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844144.1;locus_tag=PN289_06925;product=SAM-dependent methyltransferase;protein_id=MDB8828381.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 25096 26712 . - . ID=gene-PN289_06930;Name=PN289_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06930 JAQMMZ010000014.1 Protein Homology CDS 25096 26712 . - 0 ID=cds-MDB8828382.1;Parent=gene-PN289_06930;Dbxref=NCBI_GP:MDB8828382.1;Name=MDB8828382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844153.1;locus_tag=PN289_06930;product=polysaccharide biosynthesis protein;protein_id=MDB8828382.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 26847 29369 . - . ID=gene-PN289_06935;Name=PN289_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06935 JAQMMZ010000014.1 Protein Homology CDS 26847 29369 . - 0 ID=cds-MDB8828383.1;Parent=gene-PN289_06935;Dbxref=NCBI_GP:MDB8828383.1;Name=MDB8828383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845891.1;locus_tag=PN289_06935;product=cell wall-binding repeat-containing protein;protein_id=MDB8828383.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 29399 30220 . - . ID=gene-PN289_06940;Name=PN289_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06940 JAQMMZ010000014.1 Protein Homology CDS 29399 30220 . - 0 ID=cds-MDB8828384.1;Parent=gene-PN289_06940;Dbxref=NCBI_GP:MDB8828384.1;Name=MDB8828384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844147.1;locus_tag=PN289_06940;product=ComF family protein;protein_id=MDB8828384.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 30228 32450 . - . ID=gene-PN289_06945;Name=PN289_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06945 JAQMMZ010000014.1 Protein Homology CDS 30228 32450 . - 0 ID=cds-MDB8828385.1;Parent=gene-PN289_06945;Dbxref=NCBI_GP:MDB8828385.1;Name=MDB8828385.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844164.1;locus_tag=PN289_06945;product=ATP-dependent RecD-like DNA helicase;protein_id=MDB8828385.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 32725 33912 . + . ID=gene-PN289_06950;Name=PN289_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06950 JAQMMZ010000014.1 Protein Homology CDS 32725 33912 . + 0 ID=cds-MDB8828386.1;Parent=gene-PN289_06950;Dbxref=NCBI_GP:MDB8828386.1;Name=MDB8828386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844138.1;locus_tag=PN289_06950;product=hypothetical protein;protein_id=MDB8828386.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 34205 35389 . - . ID=gene-PN289_06955;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=PN289_06955 JAQMMZ010000014.1 Protein Homology CDS 34205 35389 . - 0 ID=cds-MDB8828387.1;Parent=gene-PN289_06955;Dbxref=NCBI_GP:MDB8828387.1;Name=MDB8828387.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845894.1;locus_tag=PN289_06955;product=methionine adenosyltransferase;protein_id=MDB8828387.1;transl_table=11 JAQMMZ010000014.1 cmsearch riboswitch 35500 35599 . - . ID=id-JAQMMZ010000014.1:35500..35599;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000014.1 Genbank gene 35758 37329 . - . ID=gene-PN289_06960;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PN289_06960 JAQMMZ010000014.1 Protein Homology CDS 35758 37329 . - 0 ID=cds-MDB8828388.1;Parent=gene-PN289_06960;Dbxref=NCBI_GP:MDB8828388.1;Name=MDB8828388.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845895.1;locus_tag=PN289_06960;product=murein biosynthesis integral membrane protein MurJ;protein_id=MDB8828388.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 37346 38563 . - . ID=gene-PN289_06965;Name=PN289_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06965 JAQMMZ010000014.1 Protein Homology CDS 37346 38563 . - 0 ID=cds-MDB8828389.1;Parent=gene-PN289_06965;Dbxref=NCBI_GP:MDB8828389.1;Name=MDB8828389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844122.1;locus_tag=PN289_06965;product=glycosyltransferase;protein_id=MDB8828389.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 38564 39664 . - . ID=gene-PN289_06970;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PN289_06970 JAQMMZ010000014.1 Protein Homology CDS 38564 39664 . - 0 ID=cds-MDB8828390.1;Parent=gene-PN289_06970;Dbxref=NCBI_GP:MDB8828390.1;Name=MDB8828390.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844123.1;locus_tag=PN289_06970;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=MDB8828390.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 39677 40885 . - . ID=gene-PN289_06975;Name=PN289_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06975 JAQMMZ010000014.1 Protein Homology CDS 39677 40885 . - 0 ID=cds-MDB8828391.1;Parent=gene-PN289_06975;Dbxref=NCBI_GP:MDB8828391.1;Name=MDB8828391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844143.1;locus_tag=PN289_06975;product=nucleotide sugar dehydrogenase;protein_id=MDB8828391.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 40887 42035 . - . ID=gene-PN289_06980;Name=PN289_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06980 JAQMMZ010000014.1 Protein Homology CDS 40887 42035 . - 0 ID=cds-MDB8828392.1;Parent=gene-PN289_06980;Dbxref=NCBI_GP:MDB8828392.1;Name=MDB8828392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845899.1;locus_tag=PN289_06980;product=glycosyltransferase;protein_id=MDB8828392.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 42102 43112 . - . ID=gene-PN289_06985;Name=PN289_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_06985 JAQMMZ010000014.1 Protein Homology CDS 42102 43112 . - 0 ID=cds-MDB8828393.1;Parent=gene-PN289_06985;Dbxref=NCBI_GP:MDB8828393.1;Name=MDB8828393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844136.1;locus_tag=PN289_06985;product=rod shape-determining protein;protein_id=MDB8828393.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 43149 44402 . - . ID=gene-PN289_06990;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=PN289_06990 JAQMMZ010000014.1 Protein Homology CDS 43149 44402 . - 0 ID=cds-MDB8828394.1;Parent=gene-PN289_06990;Dbxref=NCBI_GP:MDB8828394.1;Name=MDB8828394.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420721.1;locus_tag=PN289_06990;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MDB8828394.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 44613 45962 . - . ID=gene-PN289_06995;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=PN289_06995 JAQMMZ010000014.1 Protein Homology CDS 44613 45962 . - 0 ID=cds-MDB8828395.1;Parent=gene-PN289_06995;Dbxref=NCBI_GP:MDB8828395.1;Name=MDB8828395.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844162.1;locus_tag=PN289_06995;product=phosphoglucosamine mutase;protein_id=MDB8828395.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 46140 46697 . - . ID=gene-PN289_07000;Name=PN289_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07000 JAQMMZ010000014.1 Protein Homology CDS 46140 46697 . - 0 ID=cds-MDB8828396.1;Parent=gene-PN289_07000;Dbxref=NCBI_GP:MDB8828396.1;Name=MDB8828396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844167.1;locus_tag=PN289_07000;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=MDB8828396.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 46698 47486 . - . ID=gene-PN289_07005;Name=PN289_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07005 JAQMMZ010000014.1 Protein Homology CDS 46698 47486 . - 0 ID=cds-MDB8828397.1;Parent=gene-PN289_07005;Dbxref=NCBI_GP:MDB8828397.1;Name=MDB8828397.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844166.1;locus_tag=PN289_07005;product=thiamine pyrophosphate-dependent enzyme;protein_id=MDB8828397.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 47486 48547 . - . ID=gene-PN289_07010;Name=PN289_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07010 JAQMMZ010000014.1 Protein Homology CDS 47486 48547 . - 0 ID=cds-MDB8828398.1;Parent=gene-PN289_07010;Dbxref=NCBI_GP:MDB8828398.1;Name=MDB8828398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844118.1;locus_tag=PN289_07010;product=3-methyl-2-oxobutanoate dehydrogenase subunit VorB;protein_id=MDB8828398.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 48568 48786 . - . ID=gene-PN289_07015;Name=PN289_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07015 JAQMMZ010000014.1 Protein Homology CDS 48568 48786 . - 0 ID=cds-MDB8828399.1;Parent=gene-PN289_07015;Dbxref=NCBI_GP:MDB8828399.1;Name=MDB8828399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844120.1;locus_tag=PN289_07015;product=4Fe-4S dicluster domain-containing protein;protein_id=MDB8828399.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 48839 49513 . - . ID=gene-PN289_07020;Name=PN289_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07020 JAQMMZ010000014.1 Protein Homology CDS 48839 49513 . - 0 ID=cds-MDB8828400.1;Parent=gene-PN289_07020;Dbxref=NCBI_GP:MDB8828400.1;Name=MDB8828400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844157.1;locus_tag=PN289_07020;product=ATP-binding protein;protein_id=MDB8828400.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 49590 50663 . - . ID=gene-PN289_07025;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=PN289_07025 JAQMMZ010000014.1 Protein Homology CDS 49590 50663 . - 0 ID=cds-MDB8828401.1;Parent=gene-PN289_07025;Dbxref=NCBI_GP:MDB8828401.1;Name=MDB8828401.1;Ontology_term=GO:0006113,GO:0047761;gbkey=CDS;gene=buk;go_function=butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844128.1;locus_tag=PN289_07025;product=butyrate kinase;protein_id=MDB8828401.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 51332 52255 . - . ID=gene-PN289_07030;Name=PN289_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07030 JAQMMZ010000014.1 Protein Homology CDS 51332 52255 . - 0 ID=cds-MDB8828402.1;Parent=gene-PN289_07030;Dbxref=NCBI_GP:MDB8828402.1;Name=MDB8828402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846661.1;locus_tag=PN289_07030;product=hypothetical protein;protein_id=MDB8828402.1;transl_table=11 JAQMMZ010000014.1 Genbank gene 52269 53120 . - . ID=gene-PN289_07035;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=PN289_07035 JAQMMZ010000014.1 Protein Homology CDS 52269 53120 . - 0 ID=cds-MDB8828403.1;Parent=gene-PN289_07035;Dbxref=NCBI_GP:MDB8828403.1;Name=MDB8828403.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844130.1;locus_tag=PN289_07035;product=diadenylate cyclase CdaA;protein_id=MDB8828403.1;transl_table=11 ##sequence-region JAQMMZ010000015.1 1 52483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000015.1 Genbank region 1 52483 . + . ID=JAQMMZ010000015.1:1..52483;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000015.1 Genbank gene 104 523 . - . ID=gene-PN289_07040;Name=PN289_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07040 JAQMMZ010000015.1 Protein Homology CDS 104 523 . - 0 ID=cds-MDB8828404.1;Parent=gene-PN289_07040;Dbxref=NCBI_GP:MDB8828404.1;Name=MDB8828404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845930.1;locus_tag=PN289_07040;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MDB8828404.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 727 1725 . - . ID=gene-PN289_07045;Name=PN289_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07045 JAQMMZ010000015.1 Protein Homology CDS 727 1725 . - 0 ID=cds-MDB8828405.1;Parent=gene-PN289_07045;Dbxref=NCBI_GP:MDB8828405.1;Name=MDB8828405.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845929.1;locus_tag=PN289_07045;product=ATP-binding cassette domain-containing protein;protein_id=MDB8828405.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 1737 2432 . - . ID=gene-PN289_07050;Name=PN289_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07050 JAQMMZ010000015.1 Protein Homology CDS 1737 2432 . - 0 ID=cds-MDB8828406.1;Parent=gene-PN289_07050;Dbxref=NCBI_GP:MDB8828406.1;Name=MDB8828406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845928.1;locus_tag=PN289_07050;product=GTP-binding protein;protein_id=MDB8828406.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 2468 3709 . - . ID=gene-PN289_07055;Name=PN289_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07055 JAQMMZ010000015.1 Protein Homology CDS 2468 3709 . - 0 ID=cds-MDB8828407.1;Parent=gene-PN289_07055;Dbxref=NCBI_GP:MDB8828407.1;Name=MDB8828407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845927.1;locus_tag=PN289_07055;product=ABC transporter substrate-binding protein;protein_id=MDB8828407.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 4000 4401 . - . ID=gene-PN289_07060;Name=PN289_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07060 JAQMMZ010000015.1 Protein Homology CDS 4000 4401 . - 0 ID=cds-MDB8828408.1;Parent=gene-PN289_07060;Dbxref=NCBI_GP:MDB8828408.1;Name=MDB8828408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845924.1;locus_tag=PN289_07060;product=thioesterase family protein;protein_id=MDB8828408.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 4504 6168 . - . ID=gene-PN289_07065;Name=PN289_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07065 JAQMMZ010000015.1 Protein Homology CDS 4504 6168 . - 0 ID=cds-MDB8828409.1;Parent=gene-PN289_07065;Dbxref=NCBI_GP:MDB8828409.1;Name=MDB8828409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595588.1;locus_tag=PN289_07065;product=hypothetical protein;protein_id=MDB8828409.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 6405 6935 . + . ID=gene-PN289_07070;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PN289_07070 JAQMMZ010000015.1 Protein Homology CDS 6405 6935 . + 0 ID=cds-MDB8828410.1;Parent=gene-PN289_07070;Dbxref=NCBI_GP:MDB8828410.1;Name=MDB8828410.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595587.1;locus_tag=PN289_07070;product=dCTP deaminase;protein_id=MDB8828410.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 7103 7609 . + . ID=gene-PN289_07075;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PN289_07075 JAQMMZ010000015.1 Protein Homology CDS 7103 7609 . + 0 ID=cds-MDB8828411.1;Parent=gene-PN289_07075;Dbxref=NCBI_GP:MDB8828411.1;Name=MDB8828411.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845917.1;locus_tag=PN289_07075;product=thiol peroxidase;protein_id=MDB8828411.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 7771 8904 . - . ID=gene-PN289_07080;Name=PN289_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07080 JAQMMZ010000015.1 Protein Homology CDS 7771 8904 . - 0 ID=cds-MDB8828412.1;Parent=gene-PN289_07080;Dbxref=NCBI_GP:MDB8828412.1;Name=MDB8828412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595586.1;locus_tag=PN289_07080;product=cell wall-binding repeat-containing protein;protein_id=MDB8828412.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 9016 10644 . - . ID=gene-PN289_07085;Name=PN289_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07085 JAQMMZ010000015.1 Protein Homology CDS 9016 10644 . - 0 ID=cds-MDB8828413.1;Parent=gene-PN289_07085;Dbxref=NCBI_GP:MDB8828413.1;Name=MDB8828413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845915.1;locus_tag=PN289_07085;product=hypothetical protein;protein_id=MDB8828413.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 10637 11365 . - . ID=gene-PN289_07090;Name=PN289_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07090 JAQMMZ010000015.1 Protein Homology CDS 10637 11365 . - 0 ID=cds-MDB8828414.1;Parent=gene-PN289_07090;Dbxref=NCBI_GP:MDB8828414.1;Name=MDB8828414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167165.1;locus_tag=PN289_07090;product=ABC transporter ATP-binding protein;protein_id=MDB8828414.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 11508 12692 . - . ID=gene-PN289_07095;Name=PN289_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07095 JAQMMZ010000015.1 Protein Homology CDS 11508 12692 . - 0 ID=cds-MDB8828415.1;Parent=gene-PN289_07095;Dbxref=NCBI_GP:MDB8828415.1;Name=MDB8828415.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009267628.1;locus_tag=PN289_07095;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=MDB8828415.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 12880 13788 . + . ID=gene-PN289_07100;Name=PN289_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07100 JAQMMZ010000015.1 Protein Homology CDS 12880 13788 . + 0 ID=cds-MDB8828416.1;Parent=gene-PN289_07100;Dbxref=NCBI_GP:MDB8828416.1;Name=MDB8828416.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167162.1;locus_tag=PN289_07100;product=manganese-dependent inorganic pyrophosphatase;protein_id=MDB8828416.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 13815 14339 . + . ID=gene-PN289_07105;Name=PN289_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07105 JAQMMZ010000015.1 Protein Homology CDS 13815 14339 . + 0 ID=cds-MDB8828417.1;Parent=gene-PN289_07105;Dbxref=NCBI_GP:MDB8828417.1;Name=MDB8828417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845911.1;locus_tag=PN289_07105;product=peptidylprolyl isomerase;protein_id=MDB8828417.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 14513 15865 . - . ID=gene-PN289_07110;Name=PN289_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07110 JAQMMZ010000015.1 Protein Homology CDS 14513 15865 . - 0 ID=cds-MDB8828418.1;Parent=gene-PN289_07110;Dbxref=NCBI_GP:MDB8828418.1;Name=MDB8828418.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845910.1;locus_tag=PN289_07110;product=M18 family aminopeptidase;protein_id=MDB8828418.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 15923 18283 . - . ID=gene-PN289_07115;Name=PN289_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07115 JAQMMZ010000015.1 Protein Homology CDS 15923 18283 . - 0 ID=cds-MDB8828419.1;Parent=gene-PN289_07115;Dbxref=NCBI_GP:MDB8828419.1;Name=MDB8828419.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845909.1;locus_tag=PN289_07115;product=UvrD-helicase domain-containing protein;protein_id=MDB8828419.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 18422 18868 . - . ID=gene-PN289_07120;Name=PN289_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07120 JAQMMZ010000015.1 Protein Homology CDS 18422 18868 . - 0 ID=cds-MDB8828420.1;Parent=gene-PN289_07120;Dbxref=NCBI_GP:MDB8828420.1;Name=MDB8828420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167242.1;locus_tag=PN289_07120;product=bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase;protein_id=MDB8828420.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 18868 20436 . - . ID=gene-PN289_07125;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=PN289_07125 JAQMMZ010000015.1 Protein Homology CDS 18868 20436 . - 0 ID=cds-MDB8828421.1;Parent=gene-PN289_07125;Dbxref=NCBI_GP:MDB8828421.1;Name=MDB8828421.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845907.1;locus_tag=PN289_07125;product=uroporphyrinogen-III C-methyltransferase;protein_id=MDB8828421.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 20440 21363 . - . ID=gene-PN289_07130;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PN289_07130 JAQMMZ010000015.1 Protein Homology CDS 20440 21363 . - 0 ID=cds-MDB8828422.1;Parent=gene-PN289_07130;Dbxref=NCBI_GP:MDB8828422.1;Name=MDB8828422.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167245.1;locus_tag=PN289_07130;product=hydroxymethylbilane synthase;protein_id=MDB8828422.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 21603 22340 . + . ID=gene-PN289_07135;Name=PN289_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07135 JAQMMZ010000015.1 Protein Homology CDS 21603 22340 . + 0 ID=cds-MDB8828423.1;Parent=gene-PN289_07135;Dbxref=NCBI_GP:MDB8828423.1;Name=MDB8828423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845905.1;locus_tag=PN289_07135;product=TIGR01906 family membrane protein;protein_id=MDB8828423.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 22291 23046 . + . ID=gene-PN289_07140;Name=PN289_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07140 JAQMMZ010000015.1 Protein Homology CDS 22291 23046 . + 0 ID=cds-MDB8828424.1;Parent=gene-PN289_07140;Dbxref=NCBI_GP:MDB8828424.1;Name=MDB8828424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845904.1;locus_tag=PN289_07140;product=formate/nitrite transporter family protein;protein_id=MDB8828424.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 23240 24214 . - . ID=gene-PN289_07145;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=PN289_07145 JAQMMZ010000015.1 Protein Homology CDS 23240 24214 . - 0 ID=cds-MDB8828425.1;Parent=gene-PN289_07145;Dbxref=NCBI_GP:MDB8828425.1;Name=MDB8828425.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846204.1;locus_tag=PN289_07145;product=sulfite reductase subunit C;protein_id=MDB8828425.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 24226 25026 . - . ID=gene-PN289_07150;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=PN289_07150 JAQMMZ010000015.1 Protein Homology CDS 24226 25026 . - 0 ID=cds-MDB8828426.1;Parent=gene-PN289_07150;Dbxref=NCBI_GP:MDB8828426.1;Name=MDB8828426.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167178.1;locus_tag=PN289_07150;product=anaerobic sulfite reductase subunit AsrB;protein_id=MDB8828426.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 25042 26046 . - . ID=gene-PN289_07155;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=PN289_07155 JAQMMZ010000015.1 Protein Homology CDS 25042 26046 . - 0 ID=cds-MDB8828427.1;Parent=gene-PN289_07155;Dbxref=NCBI_GP:MDB8828427.1;Name=MDB8828427.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846200.1;locus_tag=PN289_07155;product=anaerobic sulfite reductase subunit AsrA;protein_id=MDB8828427.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 26288 27394 . - . ID=gene-PN289_07160;Name=PN289_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07160 JAQMMZ010000015.1 Protein Homology CDS 26288 27394 . - 0 ID=cds-MDB8828428.1;Parent=gene-PN289_07160;Dbxref=NCBI_GP:MDB8828428.1;Name=MDB8828428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846198.1;locus_tag=PN289_07160;product=metal ABC transporter permease;protein_id=MDB8828428.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 27394 28266 . - . ID=gene-PN289_07165;Name=PN289_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07165 JAQMMZ010000015.1 Protein Homology CDS 27394 28266 . - 0 ID=cds-MDB8828429.1;Parent=gene-PN289_07165;Dbxref=NCBI_GP:MDB8828429.1;Name=MDB8828429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846197.1;locus_tag=PN289_07165;product=metal ABC transporter permease;protein_id=MDB8828429.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 28267 29007 . - . ID=gene-PN289_07170;Name=PN289_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07170 JAQMMZ010000015.1 Protein Homology CDS 28267 29007 . - 0 ID=cds-MDB8828430.1;Parent=gene-PN289_07170;Dbxref=NCBI_GP:MDB8828430.1;Name=MDB8828430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167215.1;locus_tag=PN289_07170;product=ABC transporter ATP-binding protein;protein_id=MDB8828430.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 29181 30119 . - . ID=gene-PN289_07175;Name=PN289_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07175 JAQMMZ010000015.1 Protein Homology CDS 29181 30119 . - 0 ID=cds-MDB8828431.1;Parent=gene-PN289_07175;Dbxref=NCBI_GP:MDB8828431.1;Name=MDB8828431.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846195.1;locus_tag=PN289_07175;product=zinc ABC transporter substrate-binding protein;protein_id=MDB8828431.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 30209 30667 . - . ID=gene-PN289_07180;Name=PN289_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07180 JAQMMZ010000015.1 Protein Homology CDS 30209 30667 . - 0 ID=cds-MDB8828432.1;Parent=gene-PN289_07180;Dbxref=NCBI_GP:MDB8828432.1;Name=MDB8828432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167189.1;locus_tag=PN289_07180;product=flavodoxin domain-containing protein;protein_id=MDB8828432.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 30681 31388 . - . ID=gene-PN289_07185;Name=PN289_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07185 JAQMMZ010000015.1 Protein Homology CDS 30681 31388 . - 0 ID=cds-MDB8828433.1;Parent=gene-PN289_07185;Dbxref=NCBI_GP:MDB8828433.1;Name=MDB8828433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167158.1;locus_tag=PN289_07185;product=cobalt-factor II C(20)-methyltransferase;protein_id=MDB8828433.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 31392 32183 . - . ID=gene-PN289_07190;Name=PN289_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07190 JAQMMZ010000015.1 Protein Homology CDS 31392 32183 . - 0 ID=cds-MDB8828434.1;Parent=gene-PN289_07190;Dbxref=NCBI_GP:MDB8828434.1;Name=MDB8828434.1;Ontology_term=GO:0019251,GO:0016852;gbkey=CDS;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA;go_process=anaerobic cobalamin biosynthetic process|0019251||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846190.1;locus_tag=PN289_07190;product=sirohydrochlorin cobaltochelatase;protein_id=MDB8828434.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 32235 32999 . - . ID=gene-PN289_07195;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=PN289_07195 JAQMMZ010000015.1 Protein Homology CDS 32235 32999 . - 0 ID=cds-MDB8828435.1;Parent=gene-PN289_07195;Dbxref=NCBI_GP:MDB8828435.1;Name=MDB8828435.1;Ontology_term=GO:0009236,GO:0016994,GO:0005737;gbkey=CDS;gene=cobK;go_component=cytoplasm|0005737||IEA;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846189.1;locus_tag=PN289_07195;product=precorrin-6A reductase;protein_id=MDB8828435.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 32996 33721 . - . ID=gene-PN289_07200;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=PN289_07200 JAQMMZ010000015.1 Protein Homology CDS 32996 33721 . - 0 ID=cds-MDB8828436.1;Parent=gene-PN289_07200;Dbxref=NCBI_GP:MDB8828436.1;Name=MDB8828436.1;Ontology_term=GO:0009236,GO:0030789;gbkey=CDS;gene=cobJ;go_function=precorrin-3B C17-methyltransferase activity|0030789||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846187.1;locus_tag=PN289_07200;product=precorrin-3B C(17)-methyltransferase;protein_id=MDB8828436.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 33718 34965 . - . ID=gene-PN289_07205;Name=PN289_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07205 JAQMMZ010000015.1 Protein Homology CDS 33718 34965 . - 0 ID=cds-MDB8828437.1;Parent=gene-PN289_07205;Dbxref=NCBI_GP:MDB8828437.1;Name=MDB8828437.1;Ontology_term=GO:0009236;gbkey=CDS;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595505.1;locus_tag=PN289_07205;product=cobalamin biosynthesis protein;protein_id=MDB8828437.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 34946 35719 . - . ID=gene-PN289_07210;Name=PN289_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07210 JAQMMZ010000015.1 Protein Homology CDS 34946 35719 . - 0 ID=cds-MDB8828438.1;Parent=gene-PN289_07210;Dbxref=NCBI_GP:MDB8828438.1;Name=MDB8828438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846184.1;locus_tag=PN289_07210;product=cobalt-precorrin-4 methyltransferase;protein_id=MDB8828438.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 35851 36423 . - . ID=gene-PN289_07215;Name=cbiT;gbkey=Gene;gene=cbiT;gene_biotype=protein_coding;locus_tag=PN289_07215 JAQMMZ010000015.1 Protein Homology CDS 35851 36423 . - 0 ID=cds-MDB8828439.1;Parent=gene-PN289_07215;Dbxref=NCBI_GP:MDB8828439.1;Name=MDB8828439.1;Ontology_term=GO:0046140,GO:0046025;gbkey=CDS;gene=cbiT;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167205.1;locus_tag=PN289_07215;product=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) subunit CbiT;protein_id=MDB8828439.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 36489 37121 . - . ID=gene-PN289_07220;Name=cbiE;gbkey=Gene;gene=cbiE;gene_biotype=protein_coding;locus_tag=PN289_07220 JAQMMZ010000015.1 Protein Homology CDS 36489 37121 . - 0 ID=cds-MDB8828440.1;Parent=gene-PN289_07220;Dbxref=NCBI_GP:MDB8828440.1;Name=MDB8828440.1;Ontology_term=GO:0046140,GO:0046025;gbkey=CDS;gene=cbiE;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167208.1;locus_tag=PN289_07220;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating) subunit CbiE;protein_id=MDB8828440.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 37118 38290 . - . ID=gene-PN289_07225;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=PN289_07225 JAQMMZ010000015.1 Protein Homology CDS 37118 38290 . - 0 ID=cds-MDB8828441.1;Parent=gene-PN289_07225;Dbxref=NCBI_GP:MDB8828441.1;Name=MDB8828441.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167225.1;locus_tag=PN289_07225;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=MDB8828441.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 38299 38940 . - . ID=gene-PN289_07230;Name=PN289_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07230 JAQMMZ010000015.1 Protein Homology CDS 38299 38940 . - 0 ID=cds-MDB8828442.1;Parent=gene-PN289_07230;Dbxref=NCBI_GP:MDB8828442.1;Name=MDB8828442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846180.1;locus_tag=PN289_07230;product=cobalt-precorrin-8 methylmutase;protein_id=MDB8828442.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 38950 40095 . - . ID=gene-PN289_07235;Name=PN289_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07235 JAQMMZ010000015.1 Protein Homology CDS 38950 40095 . - 0 ID=cds-MDB8828443.1;Parent=gene-PN289_07235;Dbxref=NCBI_GP:MDB8828443.1;Name=MDB8828443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846179.1;locus_tag=PN289_07235;product=histidinol-phosphate transaminase;protein_id=MDB8828443.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 40243 41220 . - . ID=gene-PN289_07240;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PN289_07240 JAQMMZ010000015.1 Protein Homology CDS 40243 41220 . - 0 ID=cds-MDB8828444.1;Parent=gene-PN289_07240;Dbxref=NCBI_GP:MDB8828444.1;Name=MDB8828444.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846178.1;locus_tag=PN289_07240;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=MDB8828444.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 41225 42598 . - . ID=gene-PN289_07245;Name=PN289_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07245 JAQMMZ010000015.1 Protein Homology CDS 41225 42598 . - 0 ID=cds-MDB8828445.1;Parent=gene-PN289_07245;Dbxref=NCBI_GP:MDB8828445.1;Name=MDB8828445.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846177.1;locus_tag=PN289_07245;product=cobyrinate a%2Cc-diamide synthase;protein_id=MDB8828445.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 42602 43567 . - . ID=gene-PN289_07250;Name=PN289_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07250 JAQMMZ010000015.1 Protein Homology CDS 42602 43567 . - 0 ID=cds-MDB8828446.1;Parent=gene-PN289_07250;Dbxref=NCBI_GP:MDB8828446.1;Name=MDB8828446.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF001989.1;locus_tag=PN289_07250;product=cobyric acid synthase;protein_id=MDB8828446.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 43567 44208 . - . ID=gene-PN289_07255;Name=PN289_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07255 JAQMMZ010000015.1 Protein Homology CDS 43567 44208 . - 0 ID=cds-MDB8828447.1;Parent=gene-PN289_07255;Dbxref=NCBI_GP:MDB8828447.1;Name=MDB8828447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167219.1;locus_tag=PN289_07255;product=histidine phosphatase family protein;protein_id=MDB8828447.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 44235 45050 . - . ID=gene-PN289_07260;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PN289_07260 JAQMMZ010000015.1 Protein Homology CDS 44235 45050 . - 0 ID=cds-MDB8828448.1;Parent=gene-PN289_07260;Dbxref=NCBI_GP:MDB8828448.1;Name=MDB8828448.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167216.1;locus_tag=PN289_07260;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=MDB8828448.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 45059 45631 . - . ID=gene-PN289_07265;Name=PN289_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07265 JAQMMZ010000015.1 Protein Homology CDS 45059 45631 . - 0 ID=cds-MDB8828449.1;Parent=gene-PN289_07265;Dbxref=NCBI_GP:MDB8828449.1;Name=MDB8828449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167224.1;locus_tag=PN289_07265;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=MDB8828449.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 45619 46689 . - . ID=gene-PN289_07270;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PN289_07270 JAQMMZ010000015.1 Protein Homology CDS 45619 46689 . - 0 ID=cds-MDB8828450.1;Parent=gene-PN289_07270;Dbxref=NCBI_GP:MDB8828450.1;Name=MDB8828450.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167154.1;locus_tag=PN289_07270;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=MDB8828450.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 46761 47921 . - . ID=gene-PN289_07275;Name=PN289_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07275 JAQMMZ010000015.1 Protein Homology CDS 46761 47921 . - 0 ID=cds-MDB8828451.1;Parent=gene-PN289_07275;Dbxref=NCBI_GP:MDB8828451.1;Name=MDB8828451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167248.1;locus_tag=PN289_07275;product=S41 family peptidase;protein_id=MDB8828451.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 47946 48884 . - . ID=gene-PN289_07280;Name=PN289_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07280 JAQMMZ010000015.1 Protein Homology CDS 47946 48884 . - 0 ID=cds-MDB8828452.1;Parent=gene-PN289_07280;Dbxref=NCBI_GP:MDB8828452.1;Name=MDB8828452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846167.1;locus_tag=PN289_07280;product=transketolase family protein;protein_id=MDB8828452.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 48894 49706 . - . ID=gene-PN289_07285;Name=PN289_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07285 JAQMMZ010000015.1 Protein Homology CDS 48894 49706 . - 0 ID=cds-MDB8828453.1;Parent=gene-PN289_07285;Dbxref=NCBI_GP:MDB8828453.1;Name=MDB8828453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846163.1;locus_tag=PN289_07285;product=transketolase;protein_id=MDB8828453.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 50092 50478 . + . ID=gene-PN289_07290;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PN289_07290 JAQMMZ010000015.1 Protein Homology CDS 50092 50478 . + 0 ID=cds-MDB8828454.1;Parent=gene-PN289_07290;Dbxref=NCBI_GP:MDB8828454.1;Name=MDB8828454.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: protein motif:HMM:TIGR00516.1;locus_tag=PN289_07290;product=holo-ACP synthase;protein_id=MDB8828454.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 50480 51535 . + . ID=gene-PN289_07295;Name=PN289_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07295 JAQMMZ010000015.1 Protein Homology CDS 50480 51535 . + 0 ID=cds-MDB8828455.1;Parent=gene-PN289_07295;Dbxref=NCBI_GP:MDB8828455.1;Name=MDB8828455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167221.1;locus_tag=PN289_07295;product=cell wall-binding repeat-containing protein;protein_id=MDB8828455.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 51860 52012 . - . ID=gene-PN289_07300;Name=PN289_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07300 JAQMMZ010000015.1 Protein Homology CDS 51860 52012 . - 0 ID=cds-MDB8828456.1;Parent=gene-PN289_07300;Dbxref=NCBI_GP:MDB8828456.1;Name=MDB8828456.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF014790.2;locus_tag=PN289_07300;product=acyl-CoA dehydrogenase family protein;protein_id=MDB8828456.1;transl_table=11 JAQMMZ010000015.1 Genbank gene 52294 52483 . + . ID=gene-PN289_07305;Name=PN289_07305;end_range=52483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07305;partial=true JAQMMZ010000015.1 GeneMarkS-2+ CDS 52294 52483 . + 0 ID=cds-MDB8828457.1;Parent=gene-PN289_07305;Dbxref=NCBI_GP:MDB8828457.1;Name=MDB8828457.1;end_range=52483,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_07305;partial=true;product=hypothetical protein;protein_id=MDB8828457.1;transl_table=11 ##sequence-region JAQMMZ010000016.1 1 49743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000016.1 Genbank region 1 49743 . + . ID=JAQMMZ010000016.1:1..49743;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000016.1 Genbank gene 216 779 . + . ID=gene-PN289_07310;Name=PN289_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07310 JAQMMZ010000016.1 Protein Homology CDS 216 779 . + 0 ID=cds-MDB8828458.1;Parent=gene-PN289_07310;Dbxref=NCBI_GP:MDB8828458.1;Name=MDB8828458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417960.1;locus_tag=PN289_07310;product=hypothetical protein;protein_id=MDB8828458.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 1294 2862 . + . ID=gene-PN289_07315;Name=PN289_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07315 JAQMMZ010000016.1 Protein Homology CDS 1294 2862 . + 0 ID=cds-MDB8828459.1;Parent=gene-PN289_07315;Dbxref=NCBI_GP:MDB8828459.1;Name=MDB8828459.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845977.1;locus_tag=PN289_07315;product=type I restriction-modification system subunit M;protein_id=MDB8828459.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 2862 3884 . + . ID=gene-PN289_07320;Name=PN289_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07320 JAQMMZ010000016.1 Protein Homology CDS 2862 3884 . + 0 ID=cds-MDB8828460.1;Parent=gene-PN289_07320;Dbxref=NCBI_GP:MDB8828460.1;Name=MDB8828460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845978.1;locus_tag=PN289_07320;product=virulence RhuM family protein;protein_id=MDB8828460.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 3877 5148 . + . ID=gene-PN289_07325;Name=PN289_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07325 JAQMMZ010000016.1 Protein Homology CDS 3877 5148 . + 0 ID=cds-MDB8828461.1;Parent=gene-PN289_07325;Dbxref=NCBI_GP:MDB8828461.1;Name=MDB8828461.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=PN289_07325;product=restriction endonuclease subunit S;protein_id=MDB8828461.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 5162 5764 . + . ID=gene-PN289_07330;Name=PN289_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07330 JAQMMZ010000016.1 Protein Homology CDS 5162 5764 . + 0 ID=cds-MDB8828462.1;Parent=gene-PN289_07330;Dbxref=NCBI_GP:MDB8828462.1;Name=MDB8828462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843632.1;locus_tag=PN289_07330;product=restriction endonuclease subunit S;protein_id=MDB8828462.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 5785 9009 . + . ID=gene-PN289_07335;Name=PN289_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07335 JAQMMZ010000016.1 Protein Homology CDS 5785 9009 . + 0 ID=cds-MDB8828463.1;Parent=gene-PN289_07335;Dbxref=NCBI_GP:MDB8828463.1;Name=MDB8828463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843638.1;locus_tag=PN289_07335;product=type I restriction endonuclease subunit R;protein_id=MDB8828463.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 9391 10836 . + . ID=gene-PN289_07340;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PN289_07340 JAQMMZ010000016.1 Protein Homology CDS 9391 10836 . + 0 ID=cds-MDB8828464.1;Parent=gene-PN289_07340;Dbxref=NCBI_GP:MDB8828464.1;Name=MDB8828464.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844244.1;locus_tag=PN289_07340;product=proline--tRNA ligase;protein_id=MDB8828464.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 11143 12900 . + . ID=gene-PN289_07345;Name=PN289_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07345 JAQMMZ010000016.1 Protein Homology CDS 11143 12900 . + 0 ID=cds-MDB8828465.1;Parent=gene-PN289_07345;Dbxref=NCBI_GP:MDB8828465.1;Name=MDB8828465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844196.1;locus_tag=PN289_07345;product=ABC transporter ATP-binding protein/permease;protein_id=MDB8828465.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 12893 14614 . + . ID=gene-PN289_07350;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PN289_07350 JAQMMZ010000016.1 Protein Homology CDS 12893 14614 . + 0 ID=cds-MDB8828466.1;Parent=gene-PN289_07350;Dbxref=NCBI_GP:MDB8828466.1;Name=MDB8828466.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005886,GO:0055051;gbkey=CDS;gene=cydC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845984.1;locus_tag=PN289_07350;product=thiol reductant ABC exporter subunit CydC;protein_id=MDB8828466.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 14760 15509 . - . ID=gene-PN289_07355;Name=PN289_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07355 JAQMMZ010000016.1 Protein Homology CDS 14760 15509 . - 0 ID=cds-MDB8828467.1;Parent=gene-PN289_07355;Dbxref=NCBI_GP:MDB8828467.1;Name=MDB8828467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844205.1;locus_tag=PN289_07355;product=AraC family transcriptional regulator;protein_id=MDB8828467.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 15715 16263 . + . ID=gene-PN289_07360;Name=PN289_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07360 JAQMMZ010000016.1 Protein Homology CDS 15715 16263 . + 0 ID=cds-MDB8828468.1;Parent=gene-PN289_07360;Dbxref=NCBI_GP:MDB8828468.1;Name=MDB8828468.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844227.1;locus_tag=PN289_07360;product=flavodoxin family protein;protein_id=MDB8828468.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 16445 16918 . - . ID=gene-PN289_07365;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PN289_07365 JAQMMZ010000016.1 Protein Homology CDS 16445 16918 . - 0 ID=cds-MDB8828469.1;Parent=gene-PN289_07365;Dbxref=NCBI_GP:MDB8828469.1;Name=MDB8828469.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844192.1;locus_tag=PN289_07365;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=MDB8828469.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 16938 17705 . - . ID=gene-PN289_07370;Name=PN289_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07370 JAQMMZ010000016.1 Protein Homology CDS 16938 17705 . - 0 ID=cds-MDB8828470.1;Parent=gene-PN289_07370;Dbxref=NCBI_GP:MDB8828470.1;Name=MDB8828470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844206.1;locus_tag=PN289_07370;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MDB8828470.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 17813 18385 . - . ID=gene-PN289_07375;Name=PN289_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07375 JAQMMZ010000016.1 Protein Homology CDS 17813 18385 . - 0 ID=cds-MDB8828471.1;Parent=gene-PN289_07375;Dbxref=NCBI_GP:MDB8828471.1;Name=MDB8828471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844226.1;locus_tag=PN289_07375;product=hypothetical protein;protein_id=MDB8828471.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 18399 19841 . - . ID=gene-PN289_07380;Name=PN289_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07380 JAQMMZ010000016.1 Protein Homology CDS 18399 19841 . - 0 ID=cds-MDB8828472.1;Parent=gene-PN289_07380;Dbxref=NCBI_GP:MDB8828472.1;Name=MDB8828472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844236.1;locus_tag=PN289_07380;product=MDR family MFS transporter;protein_id=MDB8828472.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 19856 21082 . - . ID=gene-PN289_07385;Name=PN289_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07385 JAQMMZ010000016.1 Protein Homology CDS 19856 21082 . - 0 ID=cds-MDB8828473.1;Parent=gene-PN289_07385;Dbxref=NCBI_GP:MDB8828473.1;Name=MDB8828473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845988.1;locus_tag=PN289_07385;product=aminopeptidase;protein_id=MDB8828473.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 21256 22470 . + . ID=gene-PN289_07390;Name=PN289_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07390 JAQMMZ010000016.1 Protein Homology CDS 21256 22470 . + 0 ID=cds-MDB8828474.1;Parent=gene-PN289_07390;Dbxref=NCBI_GP:MDB8828474.1;Name=MDB8828474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844217.1;locus_tag=PN289_07390;product=CapA family protein;protein_id=MDB8828474.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 22747 23169 . + . ID=gene-PN289_07395;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PN289_07395 JAQMMZ010000016.1 Protein Homology CDS 22747 23169 . + 0 ID=cds-MDB8828475.1;Parent=gene-PN289_07395;Dbxref=NCBI_GP:MDB8828475.1;Name=MDB8828475.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012158364.1;locus_tag=PN289_07395;product=30S ribosomal protein S12;protein_id=MDB8828475.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 23328 23798 . + . ID=gene-PN289_07400;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PN289_07400 JAQMMZ010000016.1 Protein Homology CDS 23328 23798 . + 0 ID=cds-MDB8828476.1;Parent=gene-PN289_07400;Dbxref=NCBI_GP:MDB8828476.1;Name=MDB8828476.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788527.1;locus_tag=PN289_07400;product=30S ribosomal protein S7;protein_id=MDB8828476.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 23833 25899 . + . ID=gene-PN289_07405;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PN289_07405 JAQMMZ010000016.1 Protein Homology CDS 23833 25899 . + 0 ID=cds-MDB8828477.1;Parent=gene-PN289_07405;Dbxref=NCBI_GP:MDB8828477.1;Name=MDB8828477.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421177.1;locus_tag=PN289_07405;product=elongation factor G;protein_id=MDB8828477.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 26078 27271 . + . ID=gene-PN289_07410;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PN289_07410 JAQMMZ010000016.1 Protein Homology CDS 26078 27271 . + 0 ID=cds-MDB8828478.1;Parent=gene-PN289_07410;Dbxref=NCBI_GP:MDB8828478.1;Name=MDB8828478.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009887863.1;locus_tag=PN289_07410;product=elongation factor Tu;protein_id=MDB8828478.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 27539 28597 . + . ID=gene-PN289_07415;Name=PN289_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07415 JAQMMZ010000016.1 Protein Homology CDS 27539 28597 . + 0 ID=cds-MDB8828479.1;Parent=gene-PN289_07415;Dbxref=NCBI_GP:MDB8828479.1;Name=MDB8828479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844201.1;locus_tag=PN289_07415;product=tetratricopeptide repeat protein;protein_id=MDB8828479.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 28608 29114 . + . ID=gene-PN289_07420;Name=PN289_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07420 JAQMMZ010000016.1 Protein Homology CDS 28608 29114 . + 0 ID=cds-MDB8828480.1;Parent=gene-PN289_07420;Dbxref=NCBI_GP:MDB8828480.1;Name=MDB8828480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845993.1;locus_tag=PN289_07420;product=hypothetical protein;protein_id=MDB8828480.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 29292 30455 . + . ID=gene-PN289_07425;Name=PN289_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07425 JAQMMZ010000016.1 Protein Homology CDS 29292 30455 . + 0 ID=cds-MDB8828481.1;Parent=gene-PN289_07425;Dbxref=NCBI_GP:MDB8828481.1;Name=MDB8828481.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595386.1;locus_tag=PN289_07425;product=amidohydrolase;protein_id=MDB8828481.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 30478 32247 . + . ID=gene-PN289_07430;Name=PN289_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07430 JAQMMZ010000016.1 Protein Homology CDS 30478 32247 . + 0 ID=cds-MDB8828482.1;Parent=gene-PN289_07430;Dbxref=NCBI_GP:MDB8828482.1;Name=MDB8828482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844241.1;locus_tag=PN289_07430;product=glycerophosphodiester phosphodiesterase;protein_id=MDB8828482.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 32512 32823 . + . ID=gene-PN289_07435;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PN289_07435 JAQMMZ010000016.1 Protein Homology CDS 32512 32823 . + 0 ID=cds-MDB8828483.1;Parent=gene-PN289_07435;Dbxref=NCBI_GP:MDB8828483.1;Name=MDB8828483.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011860633.1;locus_tag=PN289_07435;product=30S ribosomal protein S10;protein_id=MDB8828483.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 32896 33525 . + . ID=gene-PN289_07440;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PN289_07440 JAQMMZ010000016.1 Protein Homology CDS 32896 33525 . + 0 ID=cds-MDB8828484.1;Parent=gene-PN289_07440;Dbxref=NCBI_GP:MDB8828484.1;Name=MDB8828484.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007791586.1;locus_tag=PN289_07440;product=50S ribosomal protein L3;protein_id=MDB8828484.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 33552 34175 . + . ID=gene-PN289_07445;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PN289_07445 JAQMMZ010000016.1 Protein Homology CDS 33552 34175 . + 0 ID=cds-MDB8828485.1;Parent=gene-PN289_07445;Dbxref=NCBI_GP:MDB8828485.1;Name=MDB8828485.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003372477.1;locus_tag=PN289_07445;product=50S ribosomal protein L4;protein_id=MDB8828485.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 34175 34465 . + . ID=gene-PN289_07450;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PN289_07450 JAQMMZ010000016.1 Protein Homology CDS 34175 34465 . + 0 ID=cds-MDB8828486.1;Parent=gene-PN289_07450;Dbxref=NCBI_GP:MDB8828486.1;Name=MDB8828486.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003435681.1;locus_tag=PN289_07450;product=50S ribosomal protein L23;protein_id=MDB8828486.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 34490 35320 . + . ID=gene-PN289_07455;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PN289_07455 JAQMMZ010000016.1 Protein Homology CDS 34490 35320 . + 0 ID=cds-MDB8828487.1;Parent=gene-PN289_07455;Dbxref=NCBI_GP:MDB8828487.1;Name=MDB8828487.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421168.1;locus_tag=PN289_07455;product=50S ribosomal protein L2;protein_id=MDB8828487.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 35354 35635 . + . ID=gene-PN289_07460;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PN289_07460 JAQMMZ010000016.1 Protein Homology CDS 35354 35635 . + 0 ID=cds-MDB8828488.1;Parent=gene-PN289_07460;Dbxref=NCBI_GP:MDB8828488.1;Name=MDB8828488.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003454422.1;locus_tag=PN289_07460;product=30S ribosomal protein S19;protein_id=MDB8828488.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 35664 36002 . + . ID=gene-PN289_07465;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=PN289_07465 JAQMMZ010000016.1 Protein Homology CDS 35664 36002 . + 0 ID=cds-MDB8828489.1;Parent=gene-PN289_07465;Dbxref=NCBI_GP:MDB8828489.1;Name=MDB8828489.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595385.1;locus_tag=PN289_07465;product=50S ribosomal protein L22;protein_id=MDB8828489.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 36021 36818 . + . ID=gene-PN289_07470;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PN289_07470 JAQMMZ010000016.1 Protein Homology CDS 36021 36818 . + 0 ID=cds-MDB8828490.1;Parent=gene-PN289_07470;Dbxref=NCBI_GP:MDB8828490.1;Name=MDB8828490.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844172.1;locus_tag=PN289_07470;product=30S ribosomal protein S3;protein_id=MDB8828490.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 36844 37272 . + . ID=gene-PN289_07475;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PN289_07475 JAQMMZ010000016.1 Protein Homology CDS 36844 37272 . + 0 ID=cds-MDB8828491.1;Parent=gene-PN289_07475;Dbxref=NCBI_GP:MDB8828491.1;Name=MDB8828491.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421160.1;locus_tag=PN289_07475;product=50S ribosomal protein L16;protein_id=MDB8828491.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 37274 37477 . + . ID=gene-PN289_07480;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PN289_07480 JAQMMZ010000016.1 Protein Homology CDS 37274 37477 . + 0 ID=cds-MDB8828492.1;Parent=gene-PN289_07480;Dbxref=NCBI_GP:MDB8828492.1;Name=MDB8828492.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005810148.1;locus_tag=PN289_07480;product=50S ribosomal protein L29;protein_id=MDB8828492.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 37504 37761 . + . ID=gene-PN289_07485;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PN289_07485 JAQMMZ010000016.1 Protein Homology CDS 37504 37761 . + 0 ID=cds-MDB8828493.1;Parent=gene-PN289_07485;Dbxref=NCBI_GP:MDB8828493.1;Name=MDB8828493.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009243086.1;locus_tag=PN289_07485;product=30S ribosomal protein S17;protein_id=MDB8828493.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 37785 38153 . + . ID=gene-PN289_07490;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PN289_07490 JAQMMZ010000016.1 Protein Homology CDS 37785 38153 . + 0 ID=cds-MDB8828494.1;Parent=gene-PN289_07490;Dbxref=NCBI_GP:MDB8828494.1;Name=MDB8828494.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=PN289_07490;product=50S ribosomal protein L14;protein_id=MDB8828494.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 38179 38484 . + . ID=gene-PN289_07495;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PN289_07495 JAQMMZ010000016.1 Protein Homology CDS 38179 38484 . + 0 ID=cds-MDB8828495.1;Parent=gene-PN289_07495;Dbxref=NCBI_GP:MDB8828495.1;Name=MDB8828495.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003427723.1;locus_tag=PN289_07495;product=50S ribosomal protein L24;protein_id=MDB8828495.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 38513 39055 . + . ID=gene-PN289_07500;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PN289_07500 JAQMMZ010000016.1 Protein Homology CDS 38513 39055 . + 0 ID=cds-MDB8828496.1;Parent=gene-PN289_07500;Dbxref=NCBI_GP:MDB8828496.1;Name=MDB8828496.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018590379.1;locus_tag=PN289_07500;product=50S ribosomal protein L5;protein_id=MDB8828496.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 39073 39258 . + . ID=gene-PN289_07505;Name=PN289_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07505 JAQMMZ010000016.1 Protein Homology CDS 39073 39258 . + 0 ID=cds-MDB8828497.1;Parent=gene-PN289_07505;Dbxref=NCBI_GP:MDB8828497.1;Name=MDB8828497.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470274.1;locus_tag=PN289_07505;product=type Z 30S ribosomal protein S14;protein_id=MDB8828497.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 39289 39687 . + . ID=gene-PN289_07510;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PN289_07510 JAQMMZ010000016.1 Protein Homology CDS 39289 39687 . + 0 ID=cds-MDB8828498.1;Parent=gene-PN289_07510;Dbxref=NCBI_GP:MDB8828498.1;Name=MDB8828498.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=PN289_07510;product=30S ribosomal protein S8;protein_id=MDB8828498.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 39716 40258 . + . ID=gene-PN289_07515;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PN289_07515 JAQMMZ010000016.1 Protein Homology CDS 39716 40258 . + 0 ID=cds-MDB8828499.1;Parent=gene-PN289_07515;Dbxref=NCBI_GP:MDB8828499.1;Name=MDB8828499.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421144.1;locus_tag=PN289_07515;product=50S ribosomal protein L6;protein_id=MDB8828499.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 40283 40651 . + . ID=gene-PN289_07520;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PN289_07520 JAQMMZ010000016.1 Protein Homology CDS 40283 40651 . + 0 ID=cds-MDB8828500.1;Parent=gene-PN289_07520;Dbxref=NCBI_GP:MDB8828500.1;Name=MDB8828500.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003369785.1;locus_tag=PN289_07520;product=50S ribosomal protein L18;protein_id=MDB8828500.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 40671 41180 . + . ID=gene-PN289_07525;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PN289_07525 JAQMMZ010000016.1 Protein Homology CDS 40671 41180 . + 0 ID=cds-MDB8828501.1;Parent=gene-PN289_07525;Dbxref=NCBI_GP:MDB8828501.1;Name=MDB8828501.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421138.1;locus_tag=PN289_07525;product=30S ribosomal protein S5;protein_id=MDB8828501.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 41199 41384 . + . ID=gene-PN289_07530;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PN289_07530 JAQMMZ010000016.1 Protein Homology CDS 41199 41384 . + 0 ID=cds-MDB8828502.1;Parent=gene-PN289_07530;Dbxref=NCBI_GP:MDB8828502.1;Name=MDB8828502.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421137.1;locus_tag=PN289_07530;product=50S ribosomal protein L30;protein_id=MDB8828502.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 41416 41859 . + . ID=gene-PN289_07535;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PN289_07535 JAQMMZ010000016.1 Protein Homology CDS 41416 41859 . + 0 ID=cds-MDB8828503.1;Parent=gene-PN289_07535;Dbxref=NCBI_GP:MDB8828503.1;Name=MDB8828503.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003357513.1;locus_tag=PN289_07535;product=50S ribosomal protein L15;protein_id=MDB8828503.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 41891 43159 . + . ID=gene-PN289_07540;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PN289_07540 JAQMMZ010000016.1 Protein Homology CDS 41891 43159 . + 0 ID=cds-MDB8828504.1;Parent=gene-PN289_07540;Dbxref=NCBI_GP:MDB8828504.1;Name=MDB8828504.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421133.1;locus_tag=PN289_07540;product=preprotein translocase subunit SecY;protein_id=MDB8828504.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 43177 43818 . + . ID=gene-PN289_07545;Name=PN289_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07545 JAQMMZ010000016.1 Protein Homology CDS 43177 43818 . + 0 ID=cds-MDB8828505.1;Parent=gene-PN289_07545;Dbxref=NCBI_GP:MDB8828505.1;Name=MDB8828505.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844174.1;locus_tag=PN289_07545;product=adenylate kinase;protein_id=MDB8828505.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 43989 44258 . + . ID=gene-PN289_07550;Name=PN289_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07550 JAQMMZ010000016.1 Protein Homology CDS 43989 44258 . + 0 ID=cds-MDB8828506.1;Parent=gene-PN289_07550;Dbxref=NCBI_GP:MDB8828506.1;Name=MDB8828506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844222.1;locus_tag=PN289_07550;product=KOW domain-containing RNA-binding protein;protein_id=MDB8828506.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 44294 44512 . + . ID=gene-PN289_07555;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PN289_07555 JAQMMZ010000016.1 Protein Homology CDS 44294 44512 . + 0 ID=cds-MDB8828507.1;Parent=gene-PN289_07555;Dbxref=NCBI_GP:MDB8828507.1;Name=MDB8828507.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500957.1;locus_tag=PN289_07555;product=translation initiation factor IF-1;protein_id=MDB8828507.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 44543 44656 . + . ID=gene-PN289_07560;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PN289_07560 JAQMMZ010000016.1 Protein Homology CDS 44543 44656 . + 0 ID=cds-MDB8828508.1;Parent=gene-PN289_07560;Dbxref=NCBI_GP:MDB8828508.1;Name=MDB8828508.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=PN289_07560;product=50S ribosomal protein L36;protein_id=MDB8828508.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 44711 45082 . + . ID=gene-PN289_07565;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PN289_07565 JAQMMZ010000016.1 Protein Homology CDS 44711 45082 . + 0 ID=cds-MDB8828509.1;Parent=gene-PN289_07565;Dbxref=NCBI_GP:MDB8828509.1;Name=MDB8828509.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003514673.1;locus_tag=PN289_07565;product=30S ribosomal protein S13;protein_id=MDB8828509.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 45114 45515 . + . ID=gene-PN289_07570;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PN289_07570 JAQMMZ010000016.1 Protein Homology CDS 45114 45515 . + 0 ID=cds-MDB8828510.1;Parent=gene-PN289_07570;Dbxref=NCBI_GP:MDB8828510.1;Name=MDB8828510.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006440523.1;locus_tag=PN289_07570;product=30S ribosomal protein S11;protein_id=MDB8828510.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 45570 46517 . + . ID=gene-PN289_07575;Name=PN289_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07575 JAQMMZ010000016.1 Protein Homology CDS 45570 46517 . + 0 ID=cds-MDB8828511.1;Parent=gene-PN289_07575;Dbxref=NCBI_GP:MDB8828511.1;Name=MDB8828511.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003427733.1;locus_tag=PN289_07575;product=DNA-directed RNA polymerase subunit alpha;protein_id=MDB8828511.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 46540 46881 . + . ID=gene-PN289_07580;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PN289_07580 JAQMMZ010000016.1 Protein Homology CDS 46540 46881 . + 0 ID=cds-MDB8828512.1;Parent=gene-PN289_07580;Dbxref=NCBI_GP:MDB8828512.1;Name=MDB8828512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003357477.1;locus_tag=PN289_07580;product=50S ribosomal protein L17;protein_id=MDB8828512.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 47279 47587 . + . ID=gene-PN289_07585;Name=PN289_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07585 JAQMMZ010000016.1 Protein Homology CDS 47279 47587 . + 0 ID=cds-MDB8828513.1;Parent=gene-PN289_07585;Dbxref=NCBI_GP:MDB8828513.1;Name=MDB8828513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846011.1;locus_tag=PN289_07585;product=hypothetical protein;protein_id=MDB8828513.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 47751 48413 . - . ID=gene-PN289_07590;Name=PN289_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07590 JAQMMZ010000016.1 Protein Homology CDS 47751 48413 . - 0 ID=cds-MDB8828514.1;Parent=gene-PN289_07590;Dbxref=NCBI_GP:MDB8828514.1;Name=MDB8828514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844173.1;locus_tag=PN289_07590;product=YoaK family protein;protein_id=MDB8828514.1;transl_table=11 JAQMMZ010000016.1 Genbank gene 48553 49491 . + . ID=gene-PN289_07595;Name=PN289_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07595 JAQMMZ010000016.1 Protein Homology CDS 48553 49491 . + 0 ID=cds-MDB8828515.1;Parent=gene-PN289_07595;Dbxref=NCBI_GP:MDB8828515.1;Name=MDB8828515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844175.1;locus_tag=PN289_07595;product=phosphoglycerate dehydrogenase;protein_id=MDB8828515.1;transl_table=11 ##sequence-region JAQMMZ010000017.1 1 45090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000017.1 Genbank region 1 45090 . + . ID=JAQMMZ010000017.1:1..45090;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000017.1 Genbank gene 275 1390 . + . ID=gene-PN289_07600;Name=PN289_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07600 JAQMMZ010000017.1 Protein Homology CDS 275 1390 . + 0 ID=cds-MDB8828516.1;Parent=gene-PN289_07600;Dbxref=NCBI_GP:MDB8828516.1;Name=MDB8828516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843140.1;locus_tag=PN289_07600;product=cation diffusion facilitator family transporter;protein_id=MDB8828516.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 1667 3334 . + . ID=gene-PN289_07605;Name=PN289_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07605 JAQMMZ010000017.1 Protein Homology CDS 1667 3334 . + 0 ID=cds-MDB8828517.1;Parent=gene-PN289_07605;Dbxref=NCBI_GP:MDB8828517.1;Name=MDB8828517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845287.1;locus_tag=PN289_07605;product=hypothetical protein;protein_id=MDB8828517.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 3347 5638 . + . ID=gene-PN289_07610;Name=PN289_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07610 JAQMMZ010000017.1 Protein Homology CDS 3347 5638 . + 0 ID=cds-MDB8828518.1;Parent=gene-PN289_07610;Dbxref=NCBI_GP:MDB8828518.1;Name=MDB8828518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843145.1;locus_tag=PN289_07610;product=ATP-dependent helicase;protein_id=MDB8828518.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 5638 6360 . + . ID=gene-PN289_07615;Name=PN289_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07615 JAQMMZ010000017.1 Protein Homology CDS 5638 6360 . + 0 ID=cds-MDB8828519.1;Parent=gene-PN289_07615;Dbxref=NCBI_GP:MDB8828519.1;Name=MDB8828519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845285.1;locus_tag=PN289_07615;product=PD-(D/E)XK nuclease family protein;protein_id=MDB8828519.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 6478 9900 . + . ID=gene-PN289_07620;Name=PN289_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07620 JAQMMZ010000017.1 Protein Homology CDS 6478 9900 . + 0 ID=cds-MDB8828520.1;Parent=gene-PN289_07620;Dbxref=NCBI_GP:MDB8828520.1;Name=MDB8828520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845284.1;locus_tag=PN289_07620;product=exodeoxyribonuclease V subunit gamma;protein_id=MDB8828520.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 9890 14017 . + . ID=gene-PN289_07625;Name=PN289_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07625 JAQMMZ010000017.1 Protein Homology CDS 9890 14017 . + 0 ID=cds-MDB8828521.1;Parent=gene-PN289_07625;Dbxref=NCBI_GP:MDB8828521.1;Name=MDB8828521.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845283.1;locus_tag=PN289_07625;product=UvrD-helicase domain-containing protein;protein_id=MDB8828521.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 14033 15253 . + . ID=gene-PN289_07630;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PN289_07630 JAQMMZ010000017.1 Protein Homology CDS 14033 15253 . + 0 ID=cds-MDB8828522.1;Parent=gene-PN289_07630;Dbxref=NCBI_GP:MDB8828522.1;Name=MDB8828522.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843135.1;locus_tag=PN289_07630;product=exonuclease subunit SbcD;protein_id=MDB8828522.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 15240 17963 . + . ID=gene-PN289_07635;Name=PN289_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07635 JAQMMZ010000017.1 Protein Homology CDS 15240 17963 . + 0 ID=cds-MDB8828523.1;Parent=gene-PN289_07635;Dbxref=NCBI_GP:MDB8828523.1;Name=MDB8828523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595420.1;locus_tag=PN289_07635;product=SMC family ATPase;protein_id=MDB8828523.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 18147 19058 . + . ID=gene-PN289_07640;Name=PN289_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07640 JAQMMZ010000017.1 Protein Homology CDS 18147 19058 . + 0 ID=cds-MDB8828524.1;Parent=gene-PN289_07640;Dbxref=NCBI_GP:MDB8828524.1;Name=MDB8828524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843108.1;locus_tag=PN289_07640;product=MoxR family ATPase;protein_id=MDB8828524.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 19073 20854 . + . ID=gene-PN289_07645;Name=PN289_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07645 JAQMMZ010000017.1 Protein Homology CDS 19073 20854 . + 0 ID=cds-MDB8828525.1;Parent=gene-PN289_07645;Dbxref=NCBI_GP:MDB8828525.1;Name=MDB8828525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843114.1;locus_tag=PN289_07645;product=hypothetical protein;protein_id=MDB8828525.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 20976 21380 . + . ID=gene-PN289_07650;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PN289_07650 JAQMMZ010000017.1 Protein Homology CDS 20976 21380 . + 0 ID=cds-MDB8828526.1;Parent=gene-PN289_07650;Dbxref=NCBI_GP:MDB8828526.1;Name=MDB8828526.1;Ontology_term=GO:0006810,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843137.1;locus_tag=PN289_07650;product=large conductance mechanosensitive channel protein MscL;protein_id=MDB8828526.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 21542 22054 . + . ID=gene-PN289_07655;Name=PN289_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07655 JAQMMZ010000017.1 Protein Homology CDS 21542 22054 . + 0 ID=cds-MDB8828527.1;Parent=gene-PN289_07655;Dbxref=NCBI_GP:MDB8828527.1;Name=MDB8828527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843134.1;locus_tag=PN289_07655;product=transcription repressor NadR;protein_id=MDB8828527.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 22164 22928 . + . ID=gene-PN289_07660;Name=PN289_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07660 JAQMMZ010000017.1 Protein Homology CDS 22164 22928 . + 0 ID=cds-MDB8828528.1;Parent=gene-PN289_07660;Dbxref=NCBI_GP:MDB8828528.1;Name=MDB8828528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843124.1;locus_tag=PN289_07660;product=TatD family hydrolase;protein_id=MDB8828528.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 22921 24687 . + . ID=gene-PN289_07665;Name=PN289_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07665 JAQMMZ010000017.1 Protein Homology CDS 22921 24687 . + 0 ID=cds-MDB8828529.1;Parent=gene-PN289_07665;Dbxref=NCBI_GP:MDB8828529.1;Name=MDB8828529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845276.1;locus_tag=PN289_07665;product=ABC transporter ATP-binding protein;protein_id=MDB8828529.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 24843 25244 . + . ID=gene-PN289_07670;Name=PN289_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07670 JAQMMZ010000017.1 Protein Homology CDS 24843 25244 . + 0 ID=cds-MDB8828530.1;Parent=gene-PN289_07670;Dbxref=NCBI_GP:MDB8828530.1;Name=MDB8828530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843146.1;locus_tag=PN289_07670;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MDB8828530.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 25384 27753 . + . ID=gene-PN289_07675;Name=PN289_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07675 JAQMMZ010000017.1 Protein Homology CDS 25384 27753 . + 0 ID=cds-MDB8828531.1;Parent=gene-PN289_07675;Dbxref=NCBI_GP:MDB8828531.1;Name=MDB8828531.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595418.1;locus_tag=PN289_07675;product=heavy metal translocating P-type ATPase;protein_id=MDB8828531.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 28257 29126 . + . ID=gene-PN289_07680;Name=PN289_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07680 JAQMMZ010000017.1 Protein Homology CDS 28257 29126 . + 0 ID=cds-MDB8828532.1;Parent=gene-PN289_07680;Dbxref=NCBI_GP:MDB8828532.1;Name=MDB8828532.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843118.1;locus_tag=PN289_07680;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8828532.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 29288 29596 . + . ID=gene-PN289_07685;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PN289_07685 JAQMMZ010000017.1 Protein Homology CDS 29288 29596 . + 0 ID=cds-MDB8828533.1;Parent=gene-PN289_07685;Dbxref=NCBI_GP:MDB8828533.1;Name=MDB8828533.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012063435.1;locus_tag=PN289_07685;product=50S ribosomal protein L21;protein_id=MDB8828533.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 29605 29922 . + . ID=gene-PN289_07690;Name=PN289_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07690 JAQMMZ010000017.1 Protein Homology CDS 29605 29922 . + 0 ID=cds-MDB8828534.1;Parent=gene-PN289_07690;Dbxref=NCBI_GP:MDB8828534.1;Name=MDB8828534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843094.1;locus_tag=PN289_07690;product=ribosomal-processing cysteine protease Prp;protein_id=MDB8828534.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 29936 30226 . + . ID=gene-PN289_07695;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PN289_07695 JAQMMZ010000017.1 Protein Homology CDS 29936 30226 . + 0 ID=cds-MDB8828535.1;Parent=gene-PN289_07695;Dbxref=NCBI_GP:MDB8828535.1;Name=MDB8828535.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419086.1;locus_tag=PN289_07695;product=50S ribosomal protein L27;protein_id=MDB8828535.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 30350 31630 . + . ID=gene-PN289_07700;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=PN289_07700 JAQMMZ010000017.1 Protein Homology CDS 30350 31630 . + 0 ID=cds-MDB8828536.1;Parent=gene-PN289_07700;Dbxref=NCBI_GP:MDB8828536.1;Name=MDB8828536.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843122.1;locus_tag=PN289_07700;product=GTPase ObgE;protein_id=MDB8828536.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 31746 32150 . + . ID=gene-PN289_07705;Name=PN289_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07705 JAQMMZ010000017.1 Protein Homology CDS 31746 32150 . + 0 ID=cds-MDB8828537.1;Parent=gene-PN289_07705;Dbxref=NCBI_GP:MDB8828537.1;Name=MDB8828537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843098.1;locus_tag=PN289_07705;product=YhbY family RNA-binding protein;protein_id=MDB8828537.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 32454 33671 . + . ID=gene-PN289_07710;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PN289_07710 JAQMMZ010000017.1 Protein Homology CDS 32454 33671 . + 0 ID=cds-MDB8828538.1;Parent=gene-PN289_07710;Dbxref=NCBI_GP:MDB8828538.1;Name=MDB8828538.1;Ontology_term=GO:0006549,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine metabolic process|0006549||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843127.1;locus_tag=PN289_07710;product=threonine ammonia-lyase;protein_id=MDB8828538.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 33788 34162 . + . ID=gene-PN289_07715;Name=PN289_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07715 JAQMMZ010000017.1 Protein Homology CDS 33788 34162 . + 0 ID=cds-MDB8828539.1;Parent=gene-PN289_07715;Dbxref=NCBI_GP:MDB8828539.1;Name=MDB8828539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845271.1;locus_tag=PN289_07715;product=RidA family protein;protein_id=MDB8828539.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 34240 34653 . + . ID=gene-PN289_07720;Name=PN289_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07720 JAQMMZ010000017.1 Protein Homology CDS 34240 34653 . + 0 ID=cds-MDB8828540.1;Parent=gene-PN289_07720;Dbxref=NCBI_GP:MDB8828540.1;Name=MDB8828540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026041.2;locus_tag=PN289_07720;product=transposase family protein;protein_id=MDB8828540.1;transl_table=11 JAQMMZ010000017.1 Genbank pseudogene 34638 34796 . + . ID=gene-PN289_07725;Name=PN289_07725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_07725;pseudo=true JAQMMZ010000017.1 Protein Homology CDS 34638 34796 . + 0 ID=cds-PN289_07725;Parent=gene-PN289_07725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263890.1;locus_tag=PN289_07725;product=transposase;pseudo=true;transl_table=11 JAQMMZ010000017.1 Genbank gene 35036 35203 . + . ID=gene-PN289_07730;Name=PN289_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07730 JAQMMZ010000017.1 GeneMarkS-2+ CDS 35036 35203 . + 0 ID=cds-MDB8828541.1;Parent=gene-PN289_07730;Dbxref=NCBI_GP:MDB8828541.1;Name=MDB8828541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_07730;product=hypothetical protein;protein_id=MDB8828541.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 35263 35460 . + . ID=gene-PN289_07735;Name=PN289_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07735 JAQMMZ010000017.1 GeneMarkS-2+ CDS 35263 35460 . + 0 ID=cds-MDB8828542.1;Parent=gene-PN289_07735;Dbxref=NCBI_GP:MDB8828542.1;Name=MDB8828542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_07735;product=hypothetical protein;protein_id=MDB8828542.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 35534 37966 . + . ID=gene-PN289_07740;Name=PN289_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07740 JAQMMZ010000017.1 Protein Homology CDS 35534 37966 . + 0 ID=cds-MDB8828543.1;Parent=gene-PN289_07740;Dbxref=NCBI_GP:MDB8828543.1;Name=MDB8828543.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.2;locus_tag=PN289_07740;product=FtsX-like permease family protein;protein_id=MDB8828543.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 38036 38746 . + . ID=gene-PN289_07745;Name=PN289_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07745 JAQMMZ010000017.1 GeneMarkS-2+ CDS 38036 38746 . + 0 ID=cds-MDB8828544.1;Parent=gene-PN289_07745;Dbxref=NCBI_GP:MDB8828544.1;Name=MDB8828544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_07745;product=S8/S53 family peptidase;protein_id=MDB8828544.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 38746 39978 . + . ID=gene-PN289_07750;Name=PN289_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07750 JAQMMZ010000017.1 Protein Homology CDS 38746 39978 . + 0 ID=cds-MDB8828545.1;Parent=gene-PN289_07750;Dbxref=NCBI_GP:MDB8828545.1;Name=MDB8828545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=PN289_07750;product=radical SAM protein;protein_id=MDB8828545.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 39980 40981 . + . ID=gene-PN289_07755;Name=PN289_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07755 JAQMMZ010000017.1 Protein Homology CDS 39980 40981 . + 0 ID=cds-MDB8828546.1;Parent=gene-PN289_07755;Dbxref=NCBI_GP:MDB8828546.1;Name=MDB8828546.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=PN289_07755;product=radical SAM protein;protein_id=MDB8828546.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 41158 42408 . + . ID=gene-PN289_07760;Name=PN289_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07760 JAQMMZ010000017.1 Protein Homology CDS 41158 42408 . + 0 ID=cds-MDB8828547.1;Parent=gene-PN289_07760;Dbxref=NCBI_GP:MDB8828547.1;Name=MDB8828547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=PN289_07760;product=radical SAM protein;protein_id=MDB8828547.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 42470 43147 . + . ID=gene-PN289_07765;Name=PN289_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07765 JAQMMZ010000017.1 Protein Homology CDS 42470 43147 . + 0 ID=cds-MDB8828548.1;Parent=gene-PN289_07765;Dbxref=NCBI_GP:MDB8828548.1;Name=MDB8828548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788778.1;locus_tag=PN289_07765;product=ABC transporter ATP-binding protein;protein_id=MDB8828548.1;transl_table=11 JAQMMZ010000017.1 Genbank gene 43134 44882 . + . ID=gene-PN289_07770;Name=PN289_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07770 JAQMMZ010000017.1 Protein Homology CDS 43134 44882 . + 0 ID=cds-MDB8828549.1;Parent=gene-PN289_07770;Dbxref=NCBI_GP:MDB8828549.1;Name=MDB8828549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845875.1;locus_tag=PN289_07770;product=ABC transporter ATP-binding protein;protein_id=MDB8828549.1;transl_table=11 ##sequence-region JAQMMZ010000018.1 1 38255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000018.1 Genbank region 1 38255 . + . ID=JAQMMZ010000018.1:1..38255;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000018.1 Genbank gene 222 1094 . - . ID=gene-PN289_07775;Name=PN289_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07775 JAQMMZ010000018.1 Protein Homology CDS 222 1094 . - 0 ID=cds-MDB8828550.1;Parent=gene-PN289_07775;Dbxref=NCBI_GP:MDB8828550.1;Name=MDB8828550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843484.1;locus_tag=PN289_07775;product=alpha/beta hydrolase;protein_id=MDB8828550.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 1192 1437 . - . ID=gene-PN289_07780;Name=PN289_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07780 JAQMMZ010000018.1 Protein Homology CDS 1192 1437 . - 0 ID=cds-MDB8828551.1;Parent=gene-PN289_07780;Dbxref=NCBI_GP:MDB8828551.1;Name=MDB8828551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845294.1;locus_tag=PN289_07780;product=heavy-metal-associated domain-containing protein;protein_id=MDB8828551.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 1749 2162 . + . ID=gene-PN289_07785;Name=PN289_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07785 JAQMMZ010000018.1 Protein Homology CDS 1749 2162 . + 0 ID=cds-MDB8828552.1;Parent=gene-PN289_07785;Dbxref=NCBI_GP:MDB8828552.1;Name=MDB8828552.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843481.1;locus_tag=PN289_07785;product=flavodoxin domain-containing protein;protein_id=MDB8828552.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 2344 2982 . - . ID=gene-PN289_07790;Name=PN289_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07790 JAQMMZ010000018.1 Protein Homology CDS 2344 2982 . - 0 ID=cds-MDB8828553.1;Parent=gene-PN289_07790;Dbxref=NCBI_GP:MDB8828553.1;Name=MDB8828553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845296.1;locus_tag=PN289_07790;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828553.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 3227 5440 . - . ID=gene-PN289_07795;Name=PN289_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07795 JAQMMZ010000018.1 Protein Homology CDS 3227 5440 . - 0 ID=cds-MDB8828554.1;Parent=gene-PN289_07795;Dbxref=NCBI_GP:MDB8828554.1;Name=MDB8828554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842821.1;locus_tag=PN289_07795;product=cell wall-binding repeat-containing protein;protein_id=MDB8828554.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 5443 6213 . - . ID=gene-PN289_07800;Name=PN289_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07800 JAQMMZ010000018.1 Protein Homology CDS 5443 6213 . - 0 ID=cds-MDB8828555.1;Parent=gene-PN289_07800;Dbxref=NCBI_GP:MDB8828555.1;Name=MDB8828555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843483.1;locus_tag=PN289_07800;product=hypothetical protein;protein_id=MDB8828555.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 6771 7280 . - . ID=gene-PN289_07805;Name=PN289_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07805 JAQMMZ010000018.1 Protein Homology CDS 6771 7280 . - 0 ID=cds-MDB8828556.1;Parent=gene-PN289_07805;Dbxref=NCBI_GP:MDB8828556.1;Name=MDB8828556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843861.1;locus_tag=PN289_07805;product=QueT transporter family protein;protein_id=MDB8828556.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 7579 8202 . - . ID=gene-PN289_07810;Name=PN289_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07810 JAQMMZ010000018.1 Protein Homology CDS 7579 8202 . - 0 ID=cds-MDB8828557.1;Parent=gene-PN289_07810;Dbxref=NCBI_GP:MDB8828557.1;Name=MDB8828557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845298.1;locus_tag=PN289_07810;product=cyclase family protein;protein_id=MDB8828557.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 8204 9646 . - . ID=gene-PN289_07815;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PN289_07815 JAQMMZ010000018.1 Protein Homology CDS 8204 9646 . - 0 ID=cds-MDB8828558.1;Parent=gene-PN289_07815;Dbxref=NCBI_GP:MDB8828558.1;Name=MDB8828558.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843879.1;locus_tag=PN289_07815;product=glucose-6-phosphate dehydrogenase;protein_id=MDB8828558.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 9656 11062 . - . ID=gene-PN289_07820;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=PN289_07820 JAQMMZ010000018.1 Protein Homology CDS 9656 11062 . - 0 ID=cds-MDB8828559.1;Parent=gene-PN289_07820;Dbxref=NCBI_GP:MDB8828559.1;Name=MDB8828559.1;Ontology_term=GO:0006098,GO:0004616,GO:0005737;gbkey=CDS;gene=gnd;go_component=cytoplasm|0005737||IEA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843865.1;locus_tag=PN289_07820;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;protein_id=MDB8828559.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 11265 12497 . - . ID=gene-PN289_07825;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PN289_07825 JAQMMZ010000018.1 Protein Homology CDS 11265 12497 . - 0 ID=cds-MDB8828560.1;Parent=gene-PN289_07825;Dbxref=NCBI_GP:MDB8828560.1;Name=MDB8828560.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843864.1;locus_tag=PN289_07825;product=peptidase T;protein_id=MDB8828560.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 12661 13737 . + . ID=gene-PN289_07830;Name=PN289_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07830 JAQMMZ010000018.1 Protein Homology CDS 12661 13737 . + 0 ID=cds-MDB8828561.1;Parent=gene-PN289_07830;Dbxref=NCBI_GP:MDB8828561.1;Name=MDB8828561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843863.1;locus_tag=PN289_07830;product=galactose mutarotase;protein_id=MDB8828561.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 13790 13863 . + . ID=gene-PN289_07835;Name=PN289_07835;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_07835 JAQMMZ010000018.1 tRNAscan-SE tRNA 13790 13863 . + . ID=rna-PN289_07835;Parent=gene-PN289_07835;anticodon=(pos:13824..13826);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_07835;product=tRNA-Arg JAQMMZ010000018.1 tRNAscan-SE exon 13790 13863 . + . ID=exon-PN289_07835-1;Parent=rna-PN289_07835;anticodon=(pos:13824..13826);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_07835;product=tRNA-Arg JAQMMZ010000018.1 Genbank gene 13895 14296 . + . ID=gene-PN289_07840;Name=PN289_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07840 JAQMMZ010000018.1 Protein Homology CDS 13895 14296 . + 0 ID=cds-MDB8828562.1;Parent=gene-PN289_07840;Dbxref=NCBI_GP:MDB8828562.1;Name=MDB8828562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843867.1;locus_tag=PN289_07840;product=hypothetical protein;protein_id=MDB8828562.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 15197 16597 . - . ID=gene-PN289_07845;Name=PN289_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07845 JAQMMZ010000018.1 Protein Homology CDS 15197 16597 . - 0 ID=cds-MDB8828563.1;Parent=gene-PN289_07845;Dbxref=NCBI_GP:MDB8828563.1;Name=MDB8828563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843878.1;locus_tag=PN289_07845;product=PLP-dependent aminotransferase family protein;protein_id=MDB8828563.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 16788 17651 . + . ID=gene-PN289_07850;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=PN289_07850 JAQMMZ010000018.1 Protein Homology CDS 16788 17651 . + 0 ID=cds-MDB8828564.1;Parent=gene-PN289_07850;Dbxref=NCBI_GP:MDB8828564.1;Name=MDB8828564.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843869.1;locus_tag=PN289_07850;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=MDB8828564.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 17777 18901 . - . ID=gene-PN289_07855;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=PN289_07855 JAQMMZ010000018.1 Protein Homology CDS 17777 18901 . - 0 ID=cds-MDB8828565.1;Parent=gene-PN289_07855;Dbxref=NCBI_GP:MDB8828565.1;Name=MDB8828565.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843859.1;locus_tag=PN289_07855;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MDB8828565.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 18917 19558 . - . ID=gene-PN289_07860;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=PN289_07860 JAQMMZ010000018.1 Protein Homology CDS 18917 19558 . - 0 ID=cds-MDB8828566.1;Parent=gene-PN289_07860;Dbxref=NCBI_GP:MDB8828566.1;Name=MDB8828566.1;Ontology_term=GO:0046352,GO:0008801;gbkey=CDS;gene=pgmB;go_function=beta-phosphoglucomutase activity|0008801||IEA;go_process=disaccharide catabolic process|0046352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843877.1;locus_tag=PN289_07860;product=beta-phosphoglucomutase;protein_id=MDB8828566.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 19568 21226 . - . ID=gene-PN289_07865;Name=PN289_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07865 JAQMMZ010000018.1 Protein Homology CDS 19568 21226 . - 0 ID=cds-MDB8828567.1;Parent=gene-PN289_07865;Dbxref=NCBI_GP:MDB8828567.1;Name=MDB8828567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595266.1;locus_tag=PN289_07865;product=alpha-glucosidase;protein_id=MDB8828567.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 21246 23525 . - . ID=gene-PN289_07870;Name=PN289_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07870 JAQMMZ010000018.1 Protein Homology CDS 21246 23525 . - 0 ID=cds-MDB8828568.1;Parent=gene-PN289_07870;Dbxref=NCBI_GP:MDB8828568.1;Name=MDB8828568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843880.1;locus_tag=PN289_07870;product=glycoside hydrolase family 65 protein;protein_id=MDB8828568.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 23556 24377 . - . ID=gene-PN289_07875;Name=PN289_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07875 JAQMMZ010000018.1 Protein Homology CDS 23556 24377 . - 0 ID=cds-MDB8828569.1;Parent=gene-PN289_07875;Dbxref=NCBI_GP:MDB8828569.1;Name=MDB8828569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845308.1;locus_tag=PN289_07875;product=carbohydrate ABC transporter permease;protein_id=MDB8828569.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 24377 25249 . - . ID=gene-PN289_07880;Name=PN289_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07880 JAQMMZ010000018.1 Protein Homology CDS 24377 25249 . - 0 ID=cds-MDB8828570.1;Parent=gene-PN289_07880;Dbxref=NCBI_GP:MDB8828570.1;Name=MDB8828570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843866.1;locus_tag=PN289_07880;product=sugar ABC transporter permease;protein_id=MDB8828570.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 25323 26609 . - . ID=gene-PN289_07885;Name=PN289_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07885 JAQMMZ010000018.1 Protein Homology CDS 25323 26609 . - 0 ID=cds-MDB8828571.1;Parent=gene-PN289_07885;Dbxref=NCBI_GP:MDB8828571.1;Name=MDB8828571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843870.1;locus_tag=PN289_07885;product=ABC transporter substrate-binding protein;protein_id=MDB8828571.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 26651 27640 . - . ID=gene-PN289_07890;Name=PN289_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07890 JAQMMZ010000018.1 Protein Homology CDS 26651 27640 . - 0 ID=cds-MDB8828572.1;Parent=gene-PN289_07890;Dbxref=NCBI_GP:MDB8828572.1;Name=MDB8828572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845310.1;locus_tag=PN289_07890;product=LacI family DNA-binding transcriptional regulator;protein_id=MDB8828572.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 28120 29010 . + . ID=gene-PN289_07895;Name=PN289_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07895 JAQMMZ010000018.1 Protein Homology CDS 28120 29010 . + 0 ID=cds-MDB8828573.1;Parent=gene-PN289_07895;Dbxref=NCBI_GP:MDB8828573.1;Name=MDB8828573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595265.1;locus_tag=PN289_07895;product=ROK family protein;protein_id=MDB8828573.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 29260 30360 . - . ID=gene-PN289_07900;Name=PN289_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07900 JAQMMZ010000018.1 Protein Homology CDS 29260 30360 . - 0 ID=cds-MDB8828574.1;Parent=gene-PN289_07900;Dbxref=NCBI_GP:MDB8828574.1;Name=MDB8828574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595264.1;locus_tag=PN289_07900;product=cell wall-binding repeat-containing protein;protein_id=MDB8828574.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 30832 33054 . - . ID=gene-PN289_07905;Name=PN289_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07905 JAQMMZ010000018.1 Protein Homology CDS 30832 33054 . - 0 ID=cds-MDB8828575.1;Parent=gene-PN289_07905;Dbxref=NCBI_GP:MDB8828575.1;Name=MDB8828575.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003927.0;locus_tag=PN289_07905;product=RNA degradosome polyphosphate kinase;protein_id=MDB8828575.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 33070 33310 . - . ID=gene-PN289_07910;Name=PN289_07910;end_range=33310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07910;partial=true JAQMMZ010000018.1 Protein Homology CDS 33070 33310 . - 1 ID=cds-MDB8828576.1;Parent=gene-PN289_07910;Dbxref=NCBI_GP:MDB8828576.1;Name=MDB8828576.1;end_range=33310,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014587.2;locus_tag=PN289_07910;partial=true;product=phosphatase;protein_id=MDB8828576.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 33617 33928 . - . ID=gene-PN289_07915;Name=PN289_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07915 JAQMMZ010000018.1 Protein Homology CDS 33617 33928 . - 0 ID=cds-MDB8828577.1;Parent=gene-PN289_07915;Dbxref=NCBI_GP:MDB8828577.1;Name=MDB8828577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009428889.1;locus_tag=PN289_07915;product=hypothetical protein;protein_id=MDB8828577.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 34064 35380 . - . ID=gene-PN289_07920;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PN289_07920 JAQMMZ010000018.1 Protein Homology CDS 34064 35380 . - 0 ID=cds-MDB8828578.1;Parent=gene-PN289_07920;Dbxref=NCBI_GP:MDB8828578.1;Name=MDB8828578.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012102171.1;locus_tag=PN289_07920;product=phosphomethylpyrimidine synthase ThiC;protein_id=MDB8828578.1;transl_table=11 JAQMMZ010000018.1 cmsearch riboswitch 35410 35508 . - . ID=id-JAQMMZ010000018.1:35410..35508;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000018.1 Genbank gene 35588 35791 . - . ID=gene-PN289_07925;Name=PN289_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07925 JAQMMZ010000018.1 Protein Homology CDS 35588 35791 . - 0 ID=cds-MDB8828579.1;Parent=gene-PN289_07925;Dbxref=NCBI_GP:MDB8828579.1;Name=MDB8828579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009256741.1;locus_tag=PN289_07925;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828579.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 35781 36140 . - . ID=gene-PN289_07930;Name=PN289_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07930 JAQMMZ010000018.1 Protein Homology CDS 35781 36140 . - 0 ID=cds-MDB8828580.1;Parent=gene-PN289_07930;Dbxref=NCBI_GP:MDB8828580.1;Name=MDB8828580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024088.2;locus_tag=PN289_07930;product=DUF3796 domain-containing protein;protein_id=MDB8828580.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 36289 36639 . - . ID=gene-PN289_07935;Name=PN289_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07935 JAQMMZ010000018.1 GeneMarkS-2+ CDS 36289 36639 . - 0 ID=cds-MDB8828581.1;Parent=gene-PN289_07935;Dbxref=NCBI_GP:MDB8828581.1;Name=MDB8828581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_07935;product=hypothetical protein;protein_id=MDB8828581.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 36690 37127 . - . ID=gene-PN289_07940;Name=PN289_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07940 JAQMMZ010000018.1 Protein Homology CDS 36690 37127 . - 0 ID=cds-MDB8828582.1;Parent=gene-PN289_07940;Dbxref=NCBI_GP:MDB8828582.1;Name=MDB8828582.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=PN289_07940;product=MerR family transcriptional regulator;protein_id=MDB8828582.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 37247 37669 . - . ID=gene-PN289_07945;Name=PN289_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07945 JAQMMZ010000018.1 Protein Homology CDS 37247 37669 . - 0 ID=cds-MDB8828583.1;Parent=gene-PN289_07945;Dbxref=NCBI_GP:MDB8828583.1;Name=MDB8828583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019214836.1;locus_tag=PN289_07945;product=histidine kinase;protein_id=MDB8828583.1;transl_table=11 JAQMMZ010000018.1 Genbank gene 37679 37882 . - . ID=gene-PN289_07950;Name=PN289_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07950 JAQMMZ010000018.1 Protein Homology CDS 37679 37882 . - 0 ID=cds-MDB8828584.1;Parent=gene-PN289_07950;Dbxref=NCBI_GP:MDB8828584.1;Name=MDB8828584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019189396.1;locus_tag=PN289_07950;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828584.1;transl_table=11 ##sequence-region JAQMMZ010000019.1 1 33482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000019.1 Genbank region 1 33482 . + . ID=JAQMMZ010000019.1:1..33482;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000019.1 Genbank gene 163 1410 . + . ID=gene-PN289_07955;Name=PN289_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07955 JAQMMZ010000019.1 Protein Homology CDS 163 1410 . + 0 ID=cds-MDB8828585.1;Parent=gene-PN289_07955;Dbxref=NCBI_GP:MDB8828585.1;Name=MDB8828585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846365.1;locus_tag=PN289_07955;product=DNA polymerase IV;protein_id=MDB8828585.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 1618 2541 . + . ID=gene-PN289_07960;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PN289_07960 JAQMMZ010000019.1 Protein Homology CDS 1618 2541 . + 0 ID=cds-MDB8828586.1;Parent=gene-PN289_07960;Dbxref=NCBI_GP:MDB8828586.1;Name=MDB8828586.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843916.1;locus_tag=PN289_07960;product=thioredoxin-disulfide reductase;protein_id=MDB8828586.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 2919 3470 . + . ID=gene-PN289_07965;Name=PN289_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07965 JAQMMZ010000019.1 Protein Homology CDS 2919 3470 . + 0 ID=cds-MDB8828587.1;Parent=gene-PN289_07965;Dbxref=NCBI_GP:MDB8828587.1;Name=MDB8828587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846362.1;locus_tag=PN289_07965;product=NAD(P)H-dependent oxidoreductase;protein_id=MDB8828587.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 3838 4914 . + . ID=gene-PN289_07970;Name=PN289_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07970 JAQMMZ010000019.1 Protein Homology CDS 3838 4914 . + 0 ID=cds-MDB8828588.1;Parent=gene-PN289_07970;Dbxref=NCBI_GP:MDB8828588.1;Name=MDB8828588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843904.1;locus_tag=PN289_07970;product=Ldh family oxidoreductase;protein_id=MDB8828588.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 5441 6013 . + . ID=gene-PN289_07975;Name=PN289_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07975 JAQMMZ010000019.1 Protein Homology CDS 5441 6013 . + 0 ID=cds-MDB8828589.1;Parent=gene-PN289_07975;Dbxref=NCBI_GP:MDB8828589.1;Name=MDB8828589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843921.1;locus_tag=PN289_07975;product=hypothetical protein;protein_id=MDB8828589.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 6025 6414 . + . ID=gene-PN289_07980;Name=PN289_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07980 JAQMMZ010000019.1 Protein Homology CDS 6025 6414 . + 0 ID=cds-MDB8828590.1;Parent=gene-PN289_07980;Dbxref=NCBI_GP:MDB8828590.1;Name=MDB8828590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843931.1;locus_tag=PN289_07980;product=heavy-metal-associated domain-containing protein;protein_id=MDB8828590.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 6464 8671 . + . ID=gene-PN289_07985;Name=PN289_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07985 JAQMMZ010000019.1 Protein Homology CDS 6464 8671 . + 0 ID=cds-MDB8828591.1;Parent=gene-PN289_07985;Dbxref=NCBI_GP:MDB8828591.1;Name=MDB8828591.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843934.1;locus_tag=PN289_07985;product=heavy metal translocating P-type ATPase;protein_id=MDB8828591.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 8684 9448 . + . ID=gene-PN289_07990;Name=PN289_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07990 JAQMMZ010000019.1 Protein Homology CDS 8684 9448 . + 0 ID=cds-MDB8828592.1;Parent=gene-PN289_07990;Dbxref=NCBI_GP:MDB8828592.1;Name=MDB8828592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843914.1;locus_tag=PN289_07990;product=hypothetical protein;protein_id=MDB8828592.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 9547 9822 . + . ID=gene-PN289_07995;Name=PN289_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_07995 JAQMMZ010000019.1 Protein Homology CDS 9547 9822 . + 0 ID=cds-MDB8828593.1;Parent=gene-PN289_07995;Dbxref=NCBI_GP:MDB8828593.1;Name=MDB8828593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843939.1;locus_tag=PN289_07995;product=hypothetical protein;protein_id=MDB8828593.1;transl_table=11 JAQMMZ010000019.1 cmsearch riboswitch 9894 10009 . + . ID=id-JAQMMZ010000019.1:9894..10009;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000019.1 Genbank gene 10144 11445 . + . ID=gene-PN289_08000;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PN289_08000 JAQMMZ010000019.1 Protein Homology CDS 10144 11445 . + 0 ID=cds-MDB8828594.1;Parent=gene-PN289_08000;Dbxref=NCBI_GP:MDB8828594.1;Name=MDB8828594.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843923.1;locus_tag=PN289_08000;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=MDB8828594.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 11430 12098 . + . ID=gene-PN289_08005;Name=PN289_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08005 JAQMMZ010000019.1 Protein Homology CDS 11430 12098 . + 0 ID=cds-MDB8828595.1;Parent=gene-PN289_08005;Dbxref=NCBI_GP:MDB8828595.1;Name=MDB8828595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843922.1;locus_tag=PN289_08005;product=riboflavin synthase;protein_id=MDB8828595.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 12266 13471 . + . ID=gene-PN289_08010;Name=PN289_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08010 JAQMMZ010000019.1 Protein Homology CDS 12266 13471 . + 0 ID=cds-MDB8828596.1;Parent=gene-PN289_08010;Dbxref=NCBI_GP:MDB8828596.1;Name=MDB8828596.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843888.1;locus_tag=PN289_08010;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=MDB8828596.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 13536 14000 . + . ID=gene-PN289_08015;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PN289_08015 JAQMMZ010000019.1 Protein Homology CDS 13536 14000 . + 0 ID=cds-MDB8828597.1;Parent=gene-PN289_08015;Dbxref=NCBI_GP:MDB8828597.1;Name=MDB8828597.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843893.1;locus_tag=PN289_08015;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=MDB8828597.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 14110 14910 . + . ID=gene-PN289_08020;Name=PN289_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08020 JAQMMZ010000019.1 Protein Homology CDS 14110 14910 . + 0 ID=cds-MDB8828598.1;Parent=gene-PN289_08020;Dbxref=NCBI_GP:MDB8828598.1;Name=MDB8828598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843918.1;locus_tag=PN289_08020;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MDB8828598.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 14907 15848 . - . ID=gene-PN289_08025;Name=PN289_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08025 JAQMMZ010000019.1 Protein Homology CDS 14907 15848 . - 0 ID=cds-MDB8828599.1;Parent=gene-PN289_08025;Dbxref=NCBI_GP:MDB8828599.1;Name=MDB8828599.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846615.1;locus_tag=PN289_08025;product=diacylglycerol kinase family protein;protein_id=MDB8828599.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 16100 17659 . + . ID=gene-PN289_08030;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PN289_08030 JAQMMZ010000019.1 Protein Homology CDS 16100 17659 . + 0 ID=cds-MDB8828600.1;Parent=gene-PN289_08030;Dbxref=NCBI_GP:MDB8828600.1;Name=MDB8828600.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595561.1;locus_tag=PN289_08030;product=type I 3-dehydroquinate dehydratase;protein_id=MDB8828600.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 17853 18215 . + . ID=gene-PN289_08035;Name=PN289_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08035 JAQMMZ010000019.1 Protein Homology CDS 17853 18215 . + 0 ID=cds-MDB8828601.1;Parent=gene-PN289_08035;Dbxref=NCBI_GP:MDB8828601.1;Name=MDB8828601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843920.1;locus_tag=PN289_08035;product=YbaN family protein;protein_id=MDB8828601.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 18456 19757 . + . ID=gene-PN289_08040;Name=PN289_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08040 JAQMMZ010000019.1 Protein Homology CDS 18456 19757 . + 0 ID=cds-MDB8828602.1;Parent=gene-PN289_08040;Dbxref=NCBI_GP:MDB8828602.1;Name=MDB8828602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843933.1;locus_tag=PN289_08040;product=alkaline phosphatase family protein;protein_id=MDB8828602.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 19750 21021 . + . ID=gene-PN289_08045;Name=PN289_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08045 JAQMMZ010000019.1 Protein Homology CDS 19750 21021 . + 0 ID=cds-MDB8828603.1;Parent=gene-PN289_08045;Dbxref=NCBI_GP:MDB8828603.1;Name=MDB8828603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843902.1;locus_tag=PN289_08045;product=MFS transporter;protein_id=MDB8828603.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 21142 22395 . - . ID=gene-PN289_08050;Name=PN289_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08050 JAQMMZ010000019.1 Protein Homology CDS 21142 22395 . - 0 ID=cds-MDB8828604.1;Parent=gene-PN289_08050;Dbxref=NCBI_GP:MDB8828604.1;Name=MDB8828604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843925.1;locus_tag=PN289_08050;product=extracellular solute-binding protein;protein_id=MDB8828604.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 22640 23089 . + . ID=gene-PN289_08055;Name=PN289_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08055 JAQMMZ010000019.1 Protein Homology CDS 22640 23089 . + 0 ID=cds-MDB8828605.1;Parent=gene-PN289_08055;Dbxref=NCBI_GP:MDB8828605.1;Name=MDB8828605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843947.1;locus_tag=PN289_08055;product=hypothetical protein;protein_id=MDB8828605.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 23091 24086 . + . ID=gene-PN289_08060;Name=PN289_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08060 JAQMMZ010000019.1 Protein Homology CDS 23091 24086 . + 0 ID=cds-MDB8828606.1;Parent=gene-PN289_08060;Dbxref=NCBI_GP:MDB8828606.1;Name=MDB8828606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843943.1;locus_tag=PN289_08060;product=asparaginase;protein_id=MDB8828606.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 24141 24404 . + . ID=gene-PN289_08065;Name=PN289_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08065 JAQMMZ010000019.1 Protein Homology CDS 24141 24404 . + 0 ID=cds-MDB8828607.1;Parent=gene-PN289_08065;Dbxref=NCBI_GP:MDB8828607.1;Name=MDB8828607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843940.1;locus_tag=PN289_08065;product=iron-only hydrogenase system regulator;protein_id=MDB8828607.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 24391 25443 . + . ID=gene-PN289_08070;Name=hydE;gbkey=Gene;gene=hydE;gene_biotype=protein_coding;locus_tag=PN289_08070 JAQMMZ010000019.1 Protein Homology CDS 24391 25443 . + 0 ID=cds-MDB8828608.1;Parent=gene-PN289_08070;Dbxref=NCBI_GP:MDB8828608.1;Name=MDB8828608.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=hydE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846608.1;locus_tag=PN289_08070;product=[FeFe] hydrogenase H-cluster radical SAM maturase HydE;protein_id=MDB8828608.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 25514 26890 . + . ID=gene-PN289_08075;Name=hydG;gbkey=Gene;gene=hydG;gene_biotype=protein_coding;locus_tag=PN289_08075 JAQMMZ010000019.1 Protein Homology CDS 25514 26890 . + 0 ID=cds-MDB8828609.1;Parent=gene-PN289_08075;Dbxref=NCBI_GP:MDB8828609.1;Name=MDB8828609.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=hydG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003363896.1;locus_tag=PN289_08075;product=[FeFe] hydrogenase H-cluster radical SAM maturase HydG;protein_id=MDB8828609.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 26899 28167 . + . ID=gene-PN289_08080;Name=hydF;gbkey=Gene;gene=hydF;gene_biotype=protein_coding;locus_tag=PN289_08080 JAQMMZ010000019.1 Protein Homology CDS 26899 28167 . + 0 ID=cds-MDB8828610.1;Parent=gene-PN289_08080;Dbxref=NCBI_GP:MDB8828610.1;Name=MDB8828610.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hydF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846606.1;locus_tag=PN289_08080;product=[FeFe] hydrogenase H-cluster maturation GTPase HydF;protein_id=MDB8828610.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 28332 29381 . + . ID=gene-PN289_08085;Name=PN289_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08085 JAQMMZ010000019.1 Protein Homology CDS 28332 29381 . + 0 ID=cds-MDB8828611.1;Parent=gene-PN289_08085;Dbxref=NCBI_GP:MDB8828611.1;Name=MDB8828611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846605.1;locus_tag=PN289_08085;product=nitroreductase family protein;protein_id=MDB8828611.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 29520 30185 . + . ID=gene-PN289_08090;Name=PN289_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08090 JAQMMZ010000019.1 Protein Homology CDS 29520 30185 . + 0 ID=cds-MDB8828612.1;Parent=gene-PN289_08090;Dbxref=NCBI_GP:MDB8828612.1;Name=MDB8828612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843898.1;locus_tag=PN289_08090;product=hypothetical protein;protein_id=MDB8828612.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 30195 30758 . + . ID=gene-PN289_08095;Name=PN289_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08095 JAQMMZ010000019.1 Protein Homology CDS 30195 30758 . + 0 ID=cds-MDB8828613.1;Parent=gene-PN289_08095;Dbxref=NCBI_GP:MDB8828613.1;Name=MDB8828613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846603.1;locus_tag=PN289_08095;product=nitroreductase;protein_id=MDB8828613.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 30775 32643 . + . ID=gene-PN289_08100;Name=PN289_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08100 JAQMMZ010000019.1 Protein Homology CDS 30775 32643 . + 0 ID=cds-MDB8828614.1;Parent=gene-PN289_08100;Dbxref=NCBI_GP:MDB8828614.1;Name=MDB8828614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843889.1;locus_tag=PN289_08100;product=sodium:proton antiporter;protein_id=MDB8828614.1;transl_table=11 JAQMMZ010000019.1 Genbank gene 32939 33289 . + . ID=gene-PN289_08105;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PN289_08105 JAQMMZ010000019.1 cmsearch tmRNA 32939 33289 . + . ID=rna-PN289_08105;Parent=gene-PN289_08105;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_08105;product=transfer-messenger RNA JAQMMZ010000019.1 cmsearch exon 32939 33289 . + . ID=exon-PN289_08105-1;Parent=rna-PN289_08105;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_08105;product=transfer-messenger RNA ##sequence-region JAQMMZ010000001.1 1 312246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000001.1 Genbank region 1 312246 . + . ID=JAQMMZ010000001.1:1..312246;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000001.1 Genbank gene 335 1552 . + . ID=gene-PN289_00005;Name=PN289_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00005 JAQMMZ010000001.1 Protein Homology CDS 335 1552 . + 0 ID=cds-MDB8827019.1;Parent=gene-PN289_00005;Dbxref=NCBI_GP:MDB8827019.1;Name=MDB8827019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843810.1;locus_tag=PN289_00005;product=carboxylate--amine ligase;protein_id=MDB8827019.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 1628 2350 . + . ID=gene-PN289_00010;Name=PN289_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00010 JAQMMZ010000001.1 Protein Homology CDS 1628 2350 . + 0 ID=cds-MDB8827020.1;Parent=gene-PN289_00010;Dbxref=NCBI_GP:MDB8827020.1;Name=MDB8827020.1;Ontology_term=GO:0006520,GO:0047689;gbkey=CDS;go_function=aspartate racemase activity|0047689||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843769.1;locus_tag=PN289_00010;product=amino acid racemase;protein_id=MDB8827020.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 2365 3858 . + . ID=gene-PN289_00015;Name=PN289_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00015 JAQMMZ010000001.1 Protein Homology CDS 2365 3858 . + 0 ID=cds-MDB8827021.1;Parent=gene-PN289_00015;Dbxref=NCBI_GP:MDB8827021.1;Name=MDB8827021.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844779.1;locus_tag=PN289_00015;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=MDB8827021.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 4036 5133 . + . ID=gene-PN289_00020;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PN289_00020 JAQMMZ010000001.1 Protein Homology CDS 4036 5133 . + 0 ID=cds-MDB8827022.1;Parent=gene-PN289_00020;Dbxref=NCBI_GP:MDB8827022.1;Name=MDB8827022.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844781.1;locus_tag=PN289_00020;product=redox-regulated ATPase YchF;protein_id=MDB8827022.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 5240 5695 . + . ID=gene-PN289_00025;Name=PN289_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00025 JAQMMZ010000001.1 Protein Homology CDS 5240 5695 . + 0 ID=cds-MDB8827023.1;Parent=gene-PN289_00025;Dbxref=NCBI_GP:MDB8827023.1;Name=MDB8827023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843741.1;locus_tag=PN289_00025;product=leucine-rich repeat domain-containing protein;protein_id=MDB8827023.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 5746 7005 . + . ID=gene-PN289_00030;Name=PN289_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00030 JAQMMZ010000001.1 Protein Homology CDS 5746 7005 . + 0 ID=cds-MDB8827024.1;Parent=gene-PN289_00030;Dbxref=NCBI_GP:MDB8827024.1;Name=MDB8827024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844783.1;locus_tag=PN289_00030;product=pitrilysin family protein;protein_id=MDB8827024.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 7016 8308 . + . ID=gene-PN289_00035;Name=PN289_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00035 JAQMMZ010000001.1 Protein Homology CDS 7016 8308 . + 0 ID=cds-MDB8827025.1;Parent=gene-PN289_00035;Dbxref=NCBI_GP:MDB8827025.1;Name=MDB8827025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844784.1;locus_tag=PN289_00035;product=pitrilysin family protein;protein_id=MDB8827025.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 8472 9209 . + . ID=gene-PN289_00040;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PN289_00040 JAQMMZ010000001.1 Protein Homology CDS 8472 9209 . + 0 ID=cds-MDB8827026.1;Parent=gene-PN289_00040;Dbxref=NCBI_GP:MDB8827026.1;Name=MDB8827026.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843817.1;locus_tag=PN289_00040;product=prolipoprotein diacylglyceryl transferase;protein_id=MDB8827026.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 9199 10134 . + . ID=gene-PN289_00045;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PN289_00045 JAQMMZ010000001.1 Protein Homology CDS 9199 10134 . + 0 ID=cds-MDB8827027.1;Parent=gene-PN289_00045;Dbxref=NCBI_GP:MDB8827027.1;Name=MDB8827027.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843851.1;locus_tag=PN289_00045;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=MDB8827027.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 10171 11574 . + . ID=gene-PN289_00050;Name=PN289_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00050 JAQMMZ010000001.1 Protein Homology CDS 10171 11574 . + 0 ID=cds-MDB8827028.1;Parent=gene-PN289_00050;Dbxref=NCBI_GP:MDB8827028.1;Name=MDB8827028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844787.1;locus_tag=PN289_00050;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=MDB8827028.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 11578 12543 . + . ID=gene-PN289_00055;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PN289_00055 JAQMMZ010000001.1 Protein Homology CDS 11578 12543 . + 0 ID=cds-MDB8827029.1;Parent=gene-PN289_00055;Dbxref=NCBI_GP:MDB8827029.1;Name=MDB8827029.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843721.1;locus_tag=PN289_00055;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=MDB8827029.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 12856 13143 . + . ID=gene-PN289_00060;Name=PN289_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00060 JAQMMZ010000001.1 GeneMarkS-2+ CDS 12856 13143 . + 0 ID=cds-MDB8827030.1;Parent=gene-PN289_00060;Dbxref=NCBI_GP:MDB8827030.1;Name=MDB8827030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00060;product=hypothetical protein;protein_id=MDB8827030.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 13419 14792 . + . ID=gene-PN289_00065;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PN289_00065 JAQMMZ010000001.1 Protein Homology CDS 13419 14792 . + 0 ID=cds-MDB8827031.1;Parent=gene-PN289_00065;Dbxref=NCBI_GP:MDB8827031.1;Name=MDB8827031.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844806.1;locus_tag=PN289_00065;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=MDB8827031.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 14837 15940 . + . ID=gene-PN289_00070;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PN289_00070 JAQMMZ010000001.1 Protein Homology CDS 14837 15940 . + 0 ID=cds-MDB8827032.1;Parent=gene-PN289_00070;Dbxref=NCBI_GP:MDB8827032.1;Name=MDB8827032.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844808.1;locus_tag=PN289_00070;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=MDB8827032.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 16150 17304 . + . ID=gene-PN289_00075;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PN289_00075 JAQMMZ010000001.1 Protein Homology CDS 16150 17304 . + 0 ID=cds-MDB8827033.1;Parent=gene-PN289_00075;Dbxref=NCBI_GP:MDB8827033.1;Name=MDB8827033.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843760.1;locus_tag=PN289_00075;product=cell division protein FtsZ;protein_id=MDB8827033.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 17457 17936 . + . ID=gene-PN289_00080;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PN289_00080 JAQMMZ010000001.1 Protein Homology CDS 17457 17936 . + 0 ID=cds-MDB8827034.1;Parent=gene-PN289_00080;Dbxref=NCBI_GP:MDB8827034.1;Name=MDB8827034.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843806.1;locus_tag=PN289_00080;product=transcriptional regulator NrdR;protein_id=MDB8827034.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 17920 18732 . + . ID=gene-PN289_00085;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=PN289_00085 JAQMMZ010000001.1 Protein Homology CDS 17920 18732 . + 0 ID=cds-MDB8827035.1;Parent=gene-PN289_00085;Dbxref=NCBI_GP:MDB8827035.1;Name=MDB8827035.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844811.1;locus_tag=PN289_00085;product=peptidoglycan editing factor PgeF;protein_id=MDB8827035.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 18749 19444 . + . ID=gene-PN289_00090;Name=PN289_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00090 JAQMMZ010000001.1 Protein Homology CDS 18749 19444 . + 0 ID=cds-MDB8827036.1;Parent=gene-PN289_00090;Dbxref=NCBI_GP:MDB8827036.1;Name=MDB8827036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843814.1;locus_tag=PN289_00090;product=response regulator transcription factor;protein_id=MDB8827036.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 19506 20813 . + . ID=gene-PN289_00095;Name=PN289_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00095 JAQMMZ010000001.1 Protein Homology CDS 19506 20813 . + 0 ID=cds-MDB8827037.1;Parent=gene-PN289_00095;Dbxref=NCBI_GP:MDB8827037.1;Name=MDB8827037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844815.1;locus_tag=PN289_00095;product=ATP-binding protein;protein_id=MDB8827037.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 20930 22249 . + . ID=gene-PN289_00100;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PN289_00100 JAQMMZ010000001.1 Protein Homology CDS 20930 22249 . + 0 ID=cds-MDB8827038.1;Parent=gene-PN289_00100;Dbxref=NCBI_GP:MDB8827038.1;Name=MDB8827038.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843744.1;locus_tag=PN289_00100;product=ribosome biogenesis GTPase Der;protein_id=MDB8827038.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 22265 22873 . + . ID=gene-PN289_00105;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PN289_00105 JAQMMZ010000001.1 Protein Homology CDS 22265 22873 . + 0 ID=cds-MDB8827039.1;Parent=gene-PN289_00105;Dbxref=NCBI_GP:MDB8827039.1;Name=MDB8827039.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844819.1;locus_tag=PN289_00105;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=MDB8827039.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 22983 23993 . + . ID=gene-PN289_00110;Name=PN289_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00110 JAQMMZ010000001.1 Protein Homology CDS 22983 23993 . + 0 ID=cds-MDB8827040.1;Parent=gene-PN289_00110;Dbxref=NCBI_GP:MDB8827040.1;Name=MDB8827040.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844821.1;locus_tag=PN289_00110;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MDB8827040.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 24098 24799 . + . ID=gene-PN289_00115;Name=PN289_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00115 JAQMMZ010000001.1 Protein Homology CDS 24098 24799 . + 0 ID=cds-MDB8827041.1;Parent=gene-PN289_00115;Dbxref=NCBI_GP:MDB8827041.1;Name=MDB8827041.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595354.1;locus_tag=PN289_00115;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=MDB8827041.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 24879 25379 . + . ID=gene-PN289_00120;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=PN289_00120 JAQMMZ010000001.1 Protein Homology CDS 24879 25379 . + 0 ID=cds-MDB8827042.1;Parent=gene-PN289_00120;Dbxref=NCBI_GP:MDB8827042.1;Name=MDB8827042.1;Ontology_term=GO:0090529;gbkey=CDS;gene=sepF;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843826.1;locus_tag=PN289_00120;product=cell division protein SepF;protein_id=MDB8827042.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 25389 25646 . + . ID=gene-PN289_00125;Name=PN289_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00125 JAQMMZ010000001.1 Protein Homology CDS 25389 25646 . + 0 ID=cds-MDB8827043.1;Parent=gene-PN289_00125;Dbxref=NCBI_GP:MDB8827043.1;Name=MDB8827043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844826.1;locus_tag=PN289_00125;product=YggT family protein;protein_id=MDB8827043.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 25655 26437 . + . ID=gene-PN289_00130;Name=PN289_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00130 JAQMMZ010000001.1 Protein Homology CDS 25655 26437 . + 0 ID=cds-MDB8827044.1;Parent=gene-PN289_00130;Dbxref=NCBI_GP:MDB8827044.1;Name=MDB8827044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844828.1;locus_tag=PN289_00130;product=RNA-binding protein;protein_id=MDB8827044.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 26525 27172 . + . ID=gene-PN289_00135;Name=PN289_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00135 JAQMMZ010000001.1 Protein Homology CDS 26525 27172 . + 0 ID=cds-MDB8827045.1;Parent=gene-PN289_00135;Dbxref=NCBI_GP:MDB8827045.1;Name=MDB8827045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843797.1;locus_tag=PN289_00135;product=DivIVA domain-containing protein;protein_id=MDB8827045.1;transl_table=11 JAQMMZ010000001.1 cmsearch binding_site 27262 27483 . + . ID=id-JAQMMZ010000001.1:27262..27483;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000001.1 Genbank gene 27577 30702 . + . ID=gene-PN289_00140;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PN289_00140 JAQMMZ010000001.1 Protein Homology CDS 27577 30702 . + 0 ID=cds-MDB8827046.1;Parent=gene-PN289_00140;Dbxref=NCBI_GP:MDB8827046.1;Name=MDB8827046.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843762.1;locus_tag=PN289_00140;product=isoleucine--tRNA ligase;protein_id=MDB8827046.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 30836 31324 . + . ID=gene-PN289_00145;Name=PN289_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00145 JAQMMZ010000001.1 Protein Homology CDS 30836 31324 . + 0 ID=cds-MDB8827047.1;Parent=gene-PN289_00145;Dbxref=NCBI_GP:MDB8827047.1;Name=MDB8827047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595356.1;locus_tag=PN289_00145;product=GNAT family protein;protein_id=MDB8827047.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 31342 31806 . - . ID=gene-PN289_00150;Name=PN289_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00150 JAQMMZ010000001.1 Protein Homology CDS 31342 31806 . - 0 ID=cds-MDB8827048.1;Parent=gene-PN289_00150;Dbxref=NCBI_GP:MDB8827048.1;Name=MDB8827048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843770.1;locus_tag=PN289_00150;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=MDB8827048.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 32182 33381 . + . ID=gene-PN289_00155;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=PN289_00155 JAQMMZ010000001.1 Protein Homology CDS 32182 33381 . + 0 ID=cds-MDB8827049.1;Parent=gene-PN289_00155;Dbxref=NCBI_GP:MDB8827049.1;Name=MDB8827049.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844837.1;locus_tag=PN289_00155;product=exodeoxyribonuclease VII large subunit;protein_id=MDB8827049.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 33372 33671 . + . ID=gene-PN289_00160;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PN289_00160 JAQMMZ010000001.1 Protein Homology CDS 33372 33671 . + 0 ID=cds-MDB8827050.1;Parent=gene-PN289_00160;Dbxref=NCBI_GP:MDB8827050.1;Name=MDB8827050.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843813.1;locus_tag=PN289_00160;product=exodeoxyribonuclease VII small subunit;protein_id=MDB8827050.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 33671 34558 . + . ID=gene-PN289_00165;Name=PN289_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00165 JAQMMZ010000001.1 Protein Homology CDS 33671 34558 . + 0 ID=cds-MDB8827051.1;Parent=gene-PN289_00165;Dbxref=NCBI_GP:MDB8827051.1;Name=MDB8827051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843794.1;locus_tag=PN289_00165;product=polyprenyl synthetase family protein;protein_id=MDB8827051.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 34603 35037 . + . ID=gene-PN289_00170;Name=PN289_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00170 JAQMMZ010000001.1 Protein Homology CDS 34603 35037 . + 0 ID=cds-MDB8827052.1;Parent=gene-PN289_00170;Dbxref=NCBI_GP:MDB8827052.1;Name=MDB8827052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844841.1;locus_tag=PN289_00170;product=divergent PAP2 family protein;protein_id=MDB8827052.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 35064 37028 . + . ID=gene-PN289_00175;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=PN289_00175 JAQMMZ010000001.1 Protein Homology CDS 35064 37028 . + 0 ID=cds-MDB8827053.1;Parent=gene-PN289_00175;Dbxref=NCBI_GP:MDB8827053.1;Name=MDB8827053.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843742.1;locus_tag=PN289_00175;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=MDB8827053.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 37038 37916 . + . ID=gene-PN289_00180;Name=PN289_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00180 JAQMMZ010000001.1 Protein Homology CDS 37038 37916 . + 0 ID=cds-MDB8827054.1;Parent=gene-PN289_00180;Dbxref=NCBI_GP:MDB8827054.1;Name=MDB8827054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595357.1;locus_tag=PN289_00180;product=TlyA family RNA methyltransferase;protein_id=MDB8827054.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 37949 39658 . + . ID=gene-PN289_00185;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PN289_00185 JAQMMZ010000001.1 Protein Homology CDS 37949 39658 . + 0 ID=cds-MDB8827055.1;Parent=gene-PN289_00185;Dbxref=NCBI_GP:MDB8827055.1;Name=MDB8827055.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844844.1;locus_tag=PN289_00185;product=DNA repair protein RecN;protein_id=MDB8827055.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 39649 40770 . + . ID=gene-PN289_00190;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=PN289_00190 JAQMMZ010000001.1 Protein Homology CDS 39649 40770 . + 0 ID=cds-MDB8827056.1;Parent=gene-PN289_00190;Dbxref=NCBI_GP:MDB8827056.1;Name=MDB8827056.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003428389.1;locus_tag=PN289_00190;product=putative cytokinetic ring protein SteA;protein_id=MDB8827056.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 40783 41649 . + . ID=gene-PN289_00195;Name=PN289_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00195 JAQMMZ010000001.1 Protein Homology CDS 40783 41649 . + 0 ID=cds-MDB8827057.1;Parent=gene-PN289_00195;Dbxref=NCBI_GP:MDB8827057.1;Name=MDB8827057.1;Ontology_term=GO:0055070,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843780.1;locus_tag=PN289_00195;product=copper transporter;protein_id=MDB8827057.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 41740 42429 . + . ID=gene-PN289_00200;Name=PN289_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00200 JAQMMZ010000001.1 Protein Homology CDS 41740 42429 . + 0 ID=cds-MDB8827058.1;Parent=gene-PN289_00200;Dbxref=NCBI_GP:MDB8827058.1;Name=MDB8827058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843808.1;locus_tag=PN289_00200;product=glycosyltransferase family 2 protein;protein_id=MDB8827058.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 42432 43259 . + . ID=gene-PN289_00205;Name=PN289_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00205 JAQMMZ010000001.1 Protein Homology CDS 42432 43259 . + 0 ID=cds-MDB8827059.1;Parent=gene-PN289_00205;Dbxref=NCBI_GP:MDB8827059.1;Name=MDB8827059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843805.1;locus_tag=PN289_00205;product=glycosyl transferase;protein_id=MDB8827059.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 43273 44346 . + . ID=gene-PN289_00210;Name=PN289_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00210 JAQMMZ010000001.1 Protein Homology CDS 43273 44346 . + 0 ID=cds-MDB8827060.1;Parent=gene-PN289_00210;Dbxref=NCBI_GP:MDB8827060.1;Name=MDB8827060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843800.1;locus_tag=PN289_00210;product=DUF3866 family protein;protein_id=MDB8827060.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 44355 45173 . + . ID=gene-PN289_00215;Name=PN289_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00215 JAQMMZ010000001.1 Protein Homology CDS 44355 45173 . + 0 ID=cds-MDB8827061.1;Parent=gene-PN289_00215;Dbxref=NCBI_GP:MDB8827061.1;Name=MDB8827061.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843839.1;locus_tag=PN289_00215;product=purine-nucleoside phosphorylase;protein_id=MDB8827061.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 45240 46406 . + . ID=gene-PN289_00220;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=PN289_00220 JAQMMZ010000001.1 Protein Homology CDS 45240 46406 . + 0 ID=cds-MDB8827062.1;Parent=gene-PN289_00220;Dbxref=NCBI_GP:MDB8827062.1;Name=MDB8827062.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843745.1;locus_tag=PN289_00220;product=endolytic transglycosylase MltG;protein_id=MDB8827062.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 46504 47148 . + . ID=gene-PN289_00225;Name=PN289_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00225 JAQMMZ010000001.1 Protein Homology CDS 46504 47148 . + 0 ID=cds-MDB8827063.1;Parent=gene-PN289_00225;Dbxref=NCBI_GP:MDB8827063.1;Name=MDB8827063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843827.1;locus_tag=PN289_00225;product=O-methyltransferase;protein_id=MDB8827063.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 47162 48433 . + . ID=gene-PN289_00230;Name=PN289_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00230 JAQMMZ010000001.1 Protein Homology CDS 47162 48433 . + 0 ID=cds-MDB8827064.1;Parent=gene-PN289_00230;Dbxref=NCBI_GP:MDB8827064.1;Name=MDB8827064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844853.1;locus_tag=PN289_00230;product=U32 family peptidase;protein_id=MDB8827064.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 48511 49056 . - . ID=gene-PN289_00235;Name=PN289_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00235 JAQMMZ010000001.1 Protein Homology CDS 48511 49056 . - 0 ID=cds-MDB8827065.1;Parent=gene-PN289_00235;Dbxref=NCBI_GP:MDB8827065.1;Name=MDB8827065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595360.1;locus_tag=PN289_00235;product=hypothetical protein;protein_id=MDB8827065.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 49210 49734 . - . ID=gene-PN289_00240;Name=PN289_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00240 JAQMMZ010000001.1 Protein Homology CDS 49210 49734 . - 0 ID=cds-MDB8827066.1;Parent=gene-PN289_00240;Dbxref=NCBI_GP:MDB8827066.1;Name=MDB8827066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843784.1;locus_tag=PN289_00240;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=MDB8827066.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 49700 50305 . - . ID=gene-PN289_00245;Name=PN289_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00245 JAQMMZ010000001.1 Protein Homology CDS 49700 50305 . - 0 ID=cds-MDB8827067.1;Parent=gene-PN289_00245;Dbxref=NCBI_GP:MDB8827067.1;Name=MDB8827067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843854.1;locus_tag=PN289_00245;product=hypothetical protein;protein_id=MDB8827067.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 50344 50817 . - . ID=gene-PN289_00250;Name=PN289_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00250 JAQMMZ010000001.1 Protein Homology CDS 50344 50817 . - 0 ID=cds-MDB8827068.1;Parent=gene-PN289_00250;Dbxref=NCBI_GP:MDB8827068.1;Name=MDB8827068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844860.1;locus_tag=PN289_00250;product=hypothetical protein;protein_id=MDB8827068.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 51188 52789 . + . ID=gene-PN289_00255;Name=PN289_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00255 JAQMMZ010000001.1 GeneMarkS-2+ CDS 51188 52789 . + 0 ID=cds-MDB8827069.1;Parent=gene-PN289_00255;Dbxref=NCBI_GP:MDB8827069.1;Name=MDB8827069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00255;product=hypothetical protein;protein_id=MDB8827069.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 52770 53381 . + . ID=gene-PN289_00260;Name=PN289_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00260 JAQMMZ010000001.1 Protein Homology CDS 52770 53381 . + 0 ID=cds-MDB8827070.1;Parent=gene-PN289_00260;Dbxref=NCBI_GP:MDB8827070.1;Name=MDB8827070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PN289_00260;product=response regulator transcription factor;protein_id=MDB8827070.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 53963 55213 . + . ID=gene-PN289_00265;Name=PN289_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00265 JAQMMZ010000001.1 Protein Homology CDS 53963 55213 . + 0 ID=cds-MDB8827071.1;Parent=gene-PN289_00265;Dbxref=NCBI_GP:MDB8827071.1;Name=MDB8827071.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=PN289_00265;product=radical SAM protein;protein_id=MDB8827071.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 55724 57382 . + . ID=gene-PN289_00270;Name=PN289_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00270 JAQMMZ010000001.1 Protein Homology CDS 55724 57382 . + 0 ID=cds-MDB8827072.1;Parent=gene-PN289_00270;Dbxref=NCBI_GP:MDB8827072.1;Name=MDB8827072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012869.2;locus_tag=PN289_00270;product=ABC transporter ATP-binding protein;protein_id=MDB8827072.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 57887 58351 . + . ID=gene-PN289_00275;Name=PN289_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00275 JAQMMZ010000001.1 Protein Homology CDS 57887 58351 . + 0 ID=cds-MDB8827073.1;Parent=gene-PN289_00275;Dbxref=NCBI_GP:MDB8827073.1;Name=MDB8827073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844886.1;locus_tag=PN289_00275;product=ribosome maturation factor RimP;protein_id=MDB8827073.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 58372 59646 . + . ID=gene-PN289_00280;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=PN289_00280 JAQMMZ010000001.1 Protein Homology CDS 58372 59646 . + 0 ID=cds-MDB8827074.1;Parent=gene-PN289_00280;Dbxref=NCBI_GP:MDB8827074.1;Name=MDB8827074.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844885.1;locus_tag=PN289_00280;product=transcription termination factor NusA;protein_id=MDB8827074.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 59661 59942 . + . ID=gene-PN289_00285;Name=PN289_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00285 JAQMMZ010000001.1 Protein Homology CDS 59661 59942 . + 0 ID=cds-MDB8827075.1;Parent=gene-PN289_00285;Dbxref=NCBI_GP:MDB8827075.1;Name=MDB8827075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843724.1;locus_tag=PN289_00285;product=YlxR family protein;protein_id=MDB8827075.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 59945 60262 . + . ID=gene-PN289_00290;Name=PN289_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00290 JAQMMZ010000001.1 Protein Homology CDS 59945 60262 . + 0 ID=cds-MDB8827076.1;Parent=gene-PN289_00290;Dbxref=NCBI_GP:MDB8827076.1;Name=MDB8827076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843740.1;locus_tag=PN289_00290;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=MDB8827076.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 60290 62230 . + . ID=gene-PN289_00295;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PN289_00295 JAQMMZ010000001.1 Protein Homology CDS 60290 62230 . + 0 ID=cds-MDB8827077.1;Parent=gene-PN289_00295;Dbxref=NCBI_GP:MDB8827077.1;Name=MDB8827077.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595631.1;locus_tag=PN289_00295;product=translation initiation factor IF-2;protein_id=MDB8827077.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 62253 62600 . + . ID=gene-PN289_00300;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PN289_00300 JAQMMZ010000001.1 Protein Homology CDS 62253 62600 . + 0 ID=cds-MDB8827078.1;Parent=gene-PN289_00300;Dbxref=NCBI_GP:MDB8827078.1;Name=MDB8827078.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788291.1;locus_tag=PN289_00300;product=30S ribosome-binding factor RbfA;protein_id=MDB8827078.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 62770 63789 . + . ID=gene-PN289_00305;Name=PN289_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00305 JAQMMZ010000001.1 Protein Homology CDS 62770 63789 . + 0 ID=cds-MDB8827079.1;Parent=gene-PN289_00305;Dbxref=NCBI_GP:MDB8827079.1;Name=MDB8827079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595632.1;locus_tag=PN289_00305;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=MDB8827079.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 63823 64794 . + . ID=gene-PN289_00310;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PN289_00310 JAQMMZ010000001.1 Protein Homology CDS 63823 64794 . + 0 ID=cds-MDB8827080.1;Parent=gene-PN289_00310;Dbxref=NCBI_GP:MDB8827080.1;Name=MDB8827080.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844880.1;locus_tag=PN289_00310;product=tRNA pseudouridine(55) synthase TruB;protein_id=MDB8827080.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 64865 65791 . + . ID=gene-PN289_00315;Name=PN289_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00315 JAQMMZ010000001.1 Protein Homology CDS 64865 65791 . + 0 ID=cds-MDB8827081.1;Parent=gene-PN289_00315;Dbxref=NCBI_GP:MDB8827081.1;Name=MDB8827081.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595633.1;locus_tag=PN289_00315;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=MDB8827081.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 66087 66344 . + . ID=gene-PN289_00320;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PN289_00320 JAQMMZ010000001.1 Protein Homology CDS 66087 66344 . + 0 ID=cds-MDB8827082.1;Parent=gene-PN289_00320;Dbxref=NCBI_GP:MDB8827082.1;Name=MDB8827082.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843739.1;locus_tag=PN289_00320;product=30S ribosomal protein S15;protein_id=MDB8827082.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 66508 67350 . + . ID=gene-PN289_00325;Name=PN289_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00325 JAQMMZ010000001.1 Protein Homology CDS 66508 67350 . + 0 ID=cds-MDB8827083.1;Parent=gene-PN289_00325;Dbxref=NCBI_GP:MDB8827083.1;Name=MDB8827083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843737.1;locus_tag=PN289_00325;product=DegV family protein;protein_id=MDB8827083.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 67428 69518 . + . ID=gene-PN289_00330;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PN289_00330 JAQMMZ010000001.1 Protein Homology CDS 67428 69518 . + 0 ID=cds-MDB8827084.1;Parent=gene-PN289_00330;Dbxref=NCBI_GP:MDB8827084.1;Name=MDB8827084.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843726.1;locus_tag=PN289_00330;product=polyribonucleotide nucleotidyltransferase;protein_id=MDB8827084.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 69628 69843 . + . ID=gene-PN289_00335;Name=PN289_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00335 JAQMMZ010000001.1 Protein Homology CDS 69628 69843 . + 0 ID=cds-MDB8827085.1;Parent=gene-PN289_00335;Dbxref=NCBI_GP:MDB8827085.1;Name=MDB8827085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844874.1;locus_tag=PN289_00335;product=hypothetical protein;protein_id=MDB8827085.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 70039 71898 . + . ID=gene-PN289_00340;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PN289_00340 JAQMMZ010000001.1 Protein Homology CDS 70039 71898 . + 0 ID=cds-MDB8827086.1;Parent=gene-PN289_00340;Dbxref=NCBI_GP:MDB8827086.1;Name=MDB8827086.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844872.1;locus_tag=PN289_00340;product=asparagine synthase (glutamine-hydrolyzing);protein_id=MDB8827086.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 71925 73493 . + . ID=gene-PN289_00345;Name=PN289_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00345 JAQMMZ010000001.1 Protein Homology CDS 71925 73493 . + 0 ID=cds-MDB8827087.1;Parent=gene-PN289_00345;Dbxref=NCBI_GP:MDB8827087.1;Name=MDB8827087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844870.1;locus_tag=PN289_00345;product=hypothetical protein;protein_id=MDB8827087.1;transl_table=11 JAQMMZ010000001.1 cmsearch binding_site 73533 73751 . + . ID=id-JAQMMZ010000001.1:73533..73751;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000001.1 Genbank gene 73868 75268 . + . ID=gene-PN289_00350;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PN289_00350 JAQMMZ010000001.1 Protein Homology CDS 73868 75268 . + 0 ID=cds-MDB8827088.1;Parent=gene-PN289_00350;Dbxref=NCBI_GP:MDB8827088.1;Name=MDB8827088.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003423318.1;locus_tag=PN289_00350;product=asparagine--tRNA ligase;protein_id=MDB8827088.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 75393 76295 . + . ID=gene-PN289_00355;Name=PN289_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00355 JAQMMZ010000001.1 Protein Homology CDS 75393 76295 . + 0 ID=cds-MDB8827089.1;Parent=gene-PN289_00355;Dbxref=NCBI_GP:MDB8827089.1;Name=MDB8827089.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595325.1;locus_tag=PN289_00355;product=alpha/beta hydrolase;protein_id=MDB8827089.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 76313 78511 . + . ID=gene-PN289_00360;Name=PN289_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00360 JAQMMZ010000001.1 Protein Homology CDS 76313 78511 . + 0 ID=cds-MDB8827090.1;Parent=gene-PN289_00360;Dbxref=NCBI_GP:MDB8827090.1;Name=MDB8827090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844741.1;locus_tag=PN289_00360;product=AMP-binding protein;protein_id=MDB8827090.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 78670 79752 . - . ID=gene-PN289_00365;Name=PN289_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00365 JAQMMZ010000001.1 Protein Homology CDS 78670 79752 . - 0 ID=cds-MDB8827091.1;Parent=gene-PN289_00365;Dbxref=NCBI_GP:MDB8827091.1;Name=MDB8827091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845739.1;locus_tag=PN289_00365;product=PTS sugar transporter subunit IIC;protein_id=MDB8827091.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 79910 81535 . + . ID=gene-PN289_00370;Name=PN289_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00370 JAQMMZ010000001.1 Protein Homology CDS 79910 81535 . + 0 ID=cds-MDB8827092.1;Parent=gene-PN289_00370;Dbxref=NCBI_GP:MDB8827092.1;Name=MDB8827092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844673.1;locus_tag=PN289_00370;product=M3 family oligoendopeptidase;protein_id=MDB8827092.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 81560 82411 . + . ID=gene-PN289_00375;Name=PN289_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00375 JAQMMZ010000001.1 Protein Homology CDS 81560 82411 . + 0 ID=cds-MDB8827093.1;Parent=gene-PN289_00375;Dbxref=NCBI_GP:MDB8827093.1;Name=MDB8827093.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844744.1;locus_tag=PN289_00375;product=uroporphyrinogen decarboxylase family protein;protein_id=MDB8827093.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 82458 83117 . + . ID=gene-PN289_00380;Name=PN289_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00380 JAQMMZ010000001.1 Protein Homology CDS 82458 83117 . + 0 ID=cds-MDB8827094.1;Parent=gene-PN289_00380;Dbxref=NCBI_GP:MDB8827094.1;Name=MDB8827094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845734.1;locus_tag=PN289_00380;product=corrinoid protein;protein_id=MDB8827094.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 83122 84756 . + . ID=gene-PN289_00385;Name=PN289_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00385 JAQMMZ010000001.1 Protein Homology CDS 83122 84756 . + 0 ID=cds-MDB8827095.1;Parent=gene-PN289_00385;Dbxref=NCBI_GP:MDB8827095.1;Name=MDB8827095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844733.1;locus_tag=PN289_00385;product=ASKHA domain-containing protein;protein_id=MDB8827095.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 84766 85830 . + . ID=gene-PN289_00390;Name=PN289_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00390 JAQMMZ010000001.1 Protein Homology CDS 84766 85830 . + 0 ID=cds-MDB8827096.1;Parent=gene-PN289_00390;Dbxref=NCBI_GP:MDB8827096.1;Name=MDB8827096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844671.1;locus_tag=PN289_00390;product=methylcobamide--CoM methyltransferase;protein_id=MDB8827096.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 85916 86419 . - . ID=gene-PN289_00395;Name=PN289_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00395 JAQMMZ010000001.1 Protein Homology CDS 85916 86419 . - 0 ID=cds-MDB8827097.1;Parent=gene-PN289_00395;Dbxref=NCBI_GP:MDB8827097.1;Name=MDB8827097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844732.1;locus_tag=PN289_00395;product=DNA-binding protein;protein_id=MDB8827097.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 86650 87321 . + . ID=gene-PN289_00400;Name=PN289_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00400 JAQMMZ010000001.1 Protein Homology CDS 86650 87321 . + 0 ID=cds-MDB8827098.1;Parent=gene-PN289_00400;Dbxref=NCBI_GP:MDB8827098.1;Name=MDB8827098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016729560.1;locus_tag=PN289_00400;product=response regulator transcription factor;protein_id=MDB8827098.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 87311 88561 . + . ID=gene-PN289_00405;Name=PN289_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00405 JAQMMZ010000001.1 Protein Homology CDS 87311 88561 . + 0 ID=cds-MDB8827099.1;Parent=gene-PN289_00405;Dbxref=NCBI_GP:MDB8827099.1;Name=MDB8827099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845726.1;locus_tag=PN289_00405;product=HAMP domain-containing sensor histidine kinase;protein_id=MDB8827099.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 88679 88996 . + . ID=gene-PN289_00410;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PN289_00410 JAQMMZ010000001.1 Protein Homology CDS 88679 88996 . + 0 ID=cds-MDB8827100.1;Parent=gene-PN289_00410;Dbxref=NCBI_GP:MDB8827100.1;Name=MDB8827100.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844672.1;locus_tag=PN289_00410;product=thioredoxin;protein_id=MDB8827100.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 89155 90849 . + . ID=gene-PN289_00415;Name=PN289_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00415 JAQMMZ010000001.1 Protein Homology CDS 89155 90849 . + 0 ID=cds-MDB8827101.1;Parent=gene-PN289_00415;Dbxref=NCBI_GP:MDB8827101.1;Name=MDB8827101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595321.1;locus_tag=PN289_00415;product=phospho-sugar mutase;protein_id=MDB8827101.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 90915 91763 . - . ID=gene-PN289_00420;Name=PN289_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00420 JAQMMZ010000001.1 Protein Homology CDS 90915 91763 . - 0 ID=cds-MDB8827102.1;Parent=gene-PN289_00420;Dbxref=NCBI_GP:MDB8827102.1;Name=MDB8827102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844685.1;locus_tag=PN289_00420;product=YihY/virulence factor BrkB family protein;protein_id=MDB8827102.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 91921 93363 . + . ID=gene-PN289_00425;Name=PN289_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00425 JAQMMZ010000001.1 Protein Homology CDS 91921 93363 . + 0 ID=cds-MDB8827103.1;Parent=gene-PN289_00425;Dbxref=NCBI_GP:MDB8827103.1;Name=MDB8827103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844683.1;locus_tag=PN289_00425;product=3'-5' exonuclease;protein_id=MDB8827103.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 93509 94258 . + . ID=gene-PN289_00430;Name=PN289_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00430 JAQMMZ010000001.1 Protein Homology CDS 93509 94258 . + 0 ID=cds-MDB8827104.1;Parent=gene-PN289_00430;Dbxref=NCBI_GP:MDB8827104.1;Name=MDB8827104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844737.1;locus_tag=PN289_00430;product=alpha/beta hydrolase;protein_id=MDB8827104.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 94292 94957 . + . ID=gene-PN289_00435;Name=PN289_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00435 JAQMMZ010000001.1 Protein Homology CDS 94292 94957 . + 0 ID=cds-MDB8827105.1;Parent=gene-PN289_00435;Dbxref=NCBI_GP:MDB8827105.1;Name=MDB8827105.1;Ontology_term=GO:0009058,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844719.1;locus_tag=PN289_00435;product=TIGR04282 family arsenosugar biosynthesis glycosyltransferase;protein_id=MDB8827105.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 94984 96144 . + . ID=gene-PN289_00440;Name=PN289_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00440 JAQMMZ010000001.1 Protein Homology CDS 94984 96144 . + 0 ID=cds-MDB8827106.1;Parent=gene-PN289_00440;Dbxref=NCBI_GP:MDB8827106.1;Name=MDB8827106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844702.1;locus_tag=PN289_00440;product=phosphotransferase;protein_id=MDB8827106.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 96247 96972 . + . ID=gene-PN289_00445;Name=PN289_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00445 JAQMMZ010000001.1 Protein Homology CDS 96247 96972 . + 0 ID=cds-MDB8827107.1;Parent=gene-PN289_00445;Dbxref=NCBI_GP:MDB8827107.1;Name=MDB8827107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595320.1;locus_tag=PN289_00445;product=glycosyltransferase family 2 protein;protein_id=MDB8827107.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 97337 98356 . + . ID=gene-PN289_00450;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PN289_00450 JAQMMZ010000001.1 Protein Homology CDS 97337 98356 . + 0 ID=cds-MDB8827108.1;Parent=gene-PN289_00450;Dbxref=NCBI_GP:MDB8827108.1;Name=MDB8827108.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011948756.1;locus_tag=PN289_00450;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MDB8827108.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 98570 102814 . + . ID=gene-PN289_00455;Name=PN289_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00455 JAQMMZ010000001.1 Protein Homology CDS 98570 102814 . + 0 ID=cds-MDB8827109.1;Parent=gene-PN289_00455;Dbxref=NCBI_GP:MDB8827109.1;Name=MDB8827109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844728.1;locus_tag=PN289_00455;product=acyl-CoA dehydratase activase-related protein;protein_id=MDB8827109.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 102836 104158 . + . ID=gene-PN289_00460;Name=PN289_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00460 JAQMMZ010000001.1 Protein Homology CDS 102836 104158 . + 0 ID=cds-MDB8827110.1;Parent=gene-PN289_00460;Dbxref=NCBI_GP:MDB8827110.1;Name=MDB8827110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845714.1;locus_tag=PN289_00460;product=hypothetical protein;protein_id=MDB8827110.1;transl_table=11 JAQMMZ010000001.1 cmsearch binding_site 104290 104538 . + . ID=id-JAQMMZ010000001.1:104290..104538;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000001.1 Genbank gene 104656 105450 . + . ID=gene-PN289_00465;Name=PN289_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00465 JAQMMZ010000001.1 Protein Homology CDS 104656 105450 . + 0 ID=cds-MDB8827111.1;Parent=gene-PN289_00465;Dbxref=NCBI_GP:MDB8827111.1;Name=MDB8827111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845713.1;locus_tag=PN289_00465;product=amino acid ABC transporter substrate-binding protein;protein_id=MDB8827111.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 105477 106094 . + . ID=gene-PN289_00470;Name=PN289_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00470 JAQMMZ010000001.1 Protein Homology CDS 105477 106094 . + 0 ID=cds-MDB8827112.1;Parent=gene-PN289_00470;Dbxref=NCBI_GP:MDB8827112.1;Name=MDB8827112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844731.1;locus_tag=PN289_00470;product=amino acid ABC transporter permease;protein_id=MDB8827112.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 106116 106766 . + . ID=gene-PN289_00475;Name=PN289_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00475 JAQMMZ010000001.1 Protein Homology CDS 106116 106766 . + 0 ID=cds-MDB8827113.1;Parent=gene-PN289_00475;Dbxref=NCBI_GP:MDB8827113.1;Name=MDB8827113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844674.1;locus_tag=PN289_00475;product=amino acid ABC transporter ATP-binding protein;protein_id=MDB8827113.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 106911 108164 . + . ID=gene-PN289_00480;Name=PN289_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00480 JAQMMZ010000001.1 Protein Homology CDS 106911 108164 . + 0 ID=cds-MDB8827114.1;Parent=gene-PN289_00480;Dbxref=NCBI_GP:MDB8827114.1;Name=MDB8827114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844743.1;locus_tag=PN289_00480;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=MDB8827114.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 108151 109278 . + . ID=gene-PN289_00485;Name=PN289_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00485 JAQMMZ010000001.1 Protein Homology CDS 108151 109278 . + 0 ID=cds-MDB8827115.1;Parent=gene-PN289_00485;Dbxref=NCBI_GP:MDB8827115.1;Name=MDB8827115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844734.1;locus_tag=PN289_00485;product=toxic anion resistance protein;protein_id=MDB8827115.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 109287 110435 . + . ID=gene-PN289_00490;Name=PN289_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00490 JAQMMZ010000001.1 Protein Homology CDS 109287 110435 . + 0 ID=cds-MDB8827116.1;Parent=gene-PN289_00490;Dbxref=NCBI_GP:MDB8827116.1;Name=MDB8827116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844680.1;locus_tag=PN289_00490;product=class I SAM-dependent RNA methyltransferase;protein_id=MDB8827116.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 110446 111825 . + . ID=gene-PN289_00495;Name=PN289_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00495 JAQMMZ010000001.1 Protein Homology CDS 110446 111825 . + 0 ID=cds-MDB8827117.1;Parent=gene-PN289_00495;Dbxref=NCBI_GP:MDB8827117.1;Name=MDB8827117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844703.1;locus_tag=PN289_00495;product=hypothetical protein;protein_id=MDB8827117.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 111845 112540 . + . ID=gene-PN289_00500;Name=PN289_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00500 JAQMMZ010000001.1 Protein Homology CDS 111845 112540 . + 0 ID=cds-MDB8827118.1;Parent=gene-PN289_00500;Dbxref=NCBI_GP:MDB8827118.1;Name=MDB8827118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844668.1;locus_tag=PN289_00500;product=response regulator transcription factor;protein_id=MDB8827118.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 112540 113979 . + . ID=gene-PN289_00505;Name=PN289_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00505 JAQMMZ010000001.1 Protein Homology CDS 112540 113979 . + 0 ID=cds-MDB8827119.1;Parent=gene-PN289_00505;Dbxref=NCBI_GP:MDB8827119.1;Name=MDB8827119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845708.1;locus_tag=PN289_00505;product=ATP-binding protein;protein_id=MDB8827119.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 114005 115381 . + . ID=gene-PN289_00510;Name=PN289_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00510 JAQMMZ010000001.1 Protein Homology CDS 114005 115381 . + 0 ID=cds-MDB8827120.1;Parent=gene-PN289_00510;Dbxref=NCBI_GP:MDB8827120.1;Name=MDB8827120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845707.1;locus_tag=PN289_00510;product=MATE family efflux transporter;protein_id=MDB8827120.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 115423 115665 . + . ID=gene-PN289_00515;Name=PN289_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00515 JAQMMZ010000001.1 Protein Homology CDS 115423 115665 . + 0 ID=cds-MDB8827121.1;Parent=gene-PN289_00515;Dbxref=NCBI_GP:MDB8827121.1;Name=MDB8827121.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844694.1;locus_tag=PN289_00515;product=glutaredoxin domain-containing protein;protein_id=MDB8827121.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 116113 116361 . + . ID=gene-PN289_00520;Name=PN289_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00520 JAQMMZ010000001.1 Protein Homology CDS 116113 116361 . + 0 ID=cds-MDB8827122.1;Parent=gene-PN289_00520;Dbxref=NCBI_GP:MDB8827122.1;Name=MDB8827122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844677.1;locus_tag=PN289_00520;product=hypothetical protein;protein_id=MDB8827122.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 116777 118225 . + . ID=gene-PN289_00525;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PN289_00525 JAQMMZ010000001.1 Protein Homology CDS 116777 118225 . + 0 ID=cds-MDB8827123.1;Parent=gene-PN289_00525;Dbxref=NCBI_GP:MDB8827123.1;Name=MDB8827123.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844717.1;locus_tag=PN289_00525;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=MDB8827123.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 118240 118800 . + . ID=gene-PN289_00530;Name=PN289_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00530 JAQMMZ010000001.1 Protein Homology CDS 118240 118800 . + 0 ID=cds-MDB8827124.1;Parent=gene-PN289_00530;Dbxref=NCBI_GP:MDB8827124.1;Name=MDB8827124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844689.1;locus_tag=PN289_00530;product=hypothetical protein;protein_id=MDB8827124.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 118909 120573 . + . ID=gene-PN289_00535;Name=PN289_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00535 JAQMMZ010000001.1 Protein Homology CDS 118909 120573 . + 0 ID=cds-MDB8827125.1;Parent=gene-PN289_00535;Dbxref=NCBI_GP:MDB8827125.1;Name=MDB8827125.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902971.1;locus_tag=PN289_00535;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=MDB8827125.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 120702 122066 . + . ID=gene-PN289_00540;Name=PN289_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00540 JAQMMZ010000001.1 Protein Homology CDS 120702 122066 . + 0 ID=cds-MDB8827126.1;Parent=gene-PN289_00540;Dbxref=NCBI_GP:MDB8827126.1;Name=MDB8827126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844710.1;locus_tag=PN289_00540;product=GTP pyrophosphokinase;protein_id=MDB8827126.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 122092 122967 . + . ID=gene-PN289_00545;Name=PN289_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00545 JAQMMZ010000001.1 Protein Homology CDS 122092 122967 . + 0 ID=cds-MDB8827127.1;Parent=gene-PN289_00545;Dbxref=NCBI_GP:MDB8827127.1;Name=MDB8827127.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845591.1;locus_tag=PN289_00545;product=radical SAM protein;protein_id=MDB8827127.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 123158 124780 . + . ID=gene-PN289_00550;Name=PN289_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00550 JAQMMZ010000001.1 Protein Homology CDS 123158 124780 . + 0 ID=cds-MDB8827128.1;Parent=gene-PN289_00550;Dbxref=NCBI_GP:MDB8827128.1;Name=MDB8827128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844727.1;locus_tag=PN289_00550;product=Na/Pi cotransporter family protein;protein_id=MDB8827128.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 124837 125841 . + . ID=gene-PN289_00555;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PN289_00555 JAQMMZ010000001.1 Protein Homology CDS 124837 125841 . + 0 ID=cds-MDB8827129.1;Parent=gene-PN289_00555;Dbxref=NCBI_GP:MDB8827129.1;Name=MDB8827129.1;Ontology_term=GO:0043101,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844678.1;locus_tag=PN289_00555;product=adenosine deaminase;protein_id=MDB8827129.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 125869 126690 . + . ID=gene-PN289_00560;Name=PN289_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00560 JAQMMZ010000001.1 Protein Homology CDS 125869 126690 . + 0 ID=cds-MDB8827130.1;Parent=gene-PN289_00560;Dbxref=NCBI_GP:MDB8827130.1;Name=MDB8827130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844695.1;locus_tag=PN289_00560;product=Mrp/NBP35 family ATP-binding protein;protein_id=MDB8827130.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 126759 127001 . - . ID=gene-PN289_00565;Name=PN289_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00565 JAQMMZ010000001.1 Protein Homology CDS 126759 127001 . - 0 ID=cds-MDB8827131.1;Parent=gene-PN289_00565;Dbxref=NCBI_GP:MDB8827131.1;Name=MDB8827131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844707.1;locus_tag=PN289_00565;product=hypothetical protein;protein_id=MDB8827131.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 127116 127745 . + . ID=gene-PN289_00570;Name=PN289_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00570 JAQMMZ010000001.1 Protein Homology CDS 127116 127745 . + 0 ID=cds-MDB8827132.1;Parent=gene-PN289_00570;Dbxref=NCBI_GP:MDB8827132.1;Name=MDB8827132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844701.1;locus_tag=PN289_00570;product=NUDIX hydrolase;protein_id=MDB8827132.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 127730 128047 . + . ID=gene-PN289_00575;Name=PN289_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00575 JAQMMZ010000001.1 Protein Homology CDS 127730 128047 . + 0 ID=cds-MDB8827133.1;Parent=gene-PN289_00575;Dbxref=NCBI_GP:MDB8827133.1;Name=MDB8827133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844738.1;locus_tag=PN289_00575;product=GIY-YIG nuclease family protein;protein_id=MDB8827133.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 128092 129213 . + . ID=gene-PN289_00580;Name=PN289_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00580 JAQMMZ010000001.1 Protein Homology CDS 128092 129213 . + 0 ID=cds-MDB8827134.1;Parent=gene-PN289_00580;Dbxref=NCBI_GP:MDB8827134.1;Name=MDB8827134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844724.1;locus_tag=PN289_00580;product=DUF3810 family protein;protein_id=MDB8827134.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 129349 131199 . + . ID=gene-PN289_00585;Name=PN289_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00585 JAQMMZ010000001.1 Protein Homology CDS 129349 131199 . + 0 ID=cds-MDB8827135.1;Parent=gene-PN289_00585;Dbxref=NCBI_GP:MDB8827135.1;Name=MDB8827135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844700.1;locus_tag=PN289_00585;product=tetratricopeptide repeat protein;protein_id=MDB8827135.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 131223 132158 . + . ID=gene-PN289_00590;Name=PN289_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00590 JAQMMZ010000001.1 Protein Homology CDS 131223 132158 . + 0 ID=cds-MDB8827136.1;Parent=gene-PN289_00590;Dbxref=NCBI_GP:MDB8827136.1;Name=MDB8827136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844690.1;locus_tag=PN289_00590;product=magnesium transporter CorA family protein;protein_id=MDB8827136.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 132170 132901 . + . ID=gene-PN289_00595;Name=PN289_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00595 JAQMMZ010000001.1 Protein Homology CDS 132170 132901 . + 0 ID=cds-MDB8827137.1;Parent=gene-PN289_00595;Dbxref=NCBI_GP:MDB8827137.1;Name=MDB8827137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844721.1;locus_tag=PN289_00595;product=methyltransferase;protein_id=MDB8827137.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 132940 134778 . - . ID=gene-PN289_00600;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=PN289_00600 JAQMMZ010000001.1 Protein Homology CDS 132940 134778 . - 0 ID=cds-MDB8827138.1;Parent=gene-PN289_00600;Dbxref=NCBI_GP:MDB8827138.1;Name=MDB8827138.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844745.1;locus_tag=PN289_00600;product=translational GTPase TypA;protein_id=MDB8827138.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 134994 135197 . - . ID=gene-PN289_00605;Name=PN289_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00605 JAQMMZ010000001.1 Protein Homology CDS 134994 135197 . - 0 ID=cds-MDB8827139.1;Parent=gene-PN289_00605;Dbxref=NCBI_GP:MDB8827139.1;Name=MDB8827139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845584.1;locus_tag=PN289_00605;product=hypothetical protein;protein_id=MDB8827139.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 135533 137908 . + . ID=gene-PN289_00610;Name=PN289_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00610 JAQMMZ010000001.1 Protein Homology CDS 135533 137908 . + 0 ID=cds-MDB8827140.1;Parent=gene-PN289_00610;Dbxref=NCBI_GP:MDB8827140.1;Name=MDB8827140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844698.1;locus_tag=PN289_00610;product=heavy metal translocating P-type ATPase;protein_id=MDB8827140.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 137986 138279 . - . ID=gene-PN289_00615;Name=PN289_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00615 JAQMMZ010000001.1 Protein Homology CDS 137986 138279 . - 0 ID=cds-MDB8827141.1;Parent=gene-PN289_00615;Dbxref=NCBI_GP:MDB8827141.1;Name=MDB8827141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844688.1;locus_tag=PN289_00615;product=Dabb family protein;protein_id=MDB8827141.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 138521 139195 . + . ID=gene-PN289_00620;Name=PN289_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00620 JAQMMZ010000001.1 Protein Homology CDS 138521 139195 . + 0 ID=cds-MDB8827142.1;Parent=gene-PN289_00620;Dbxref=NCBI_GP:MDB8827142.1;Name=MDB8827142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844705.1;locus_tag=PN289_00620;product=response regulator transcription factor;protein_id=MDB8827142.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 139503 140876 . + . ID=gene-PN289_00625;Name=PN289_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00625 JAQMMZ010000001.1 Protein Homology CDS 139503 140876 . + 0 ID=cds-MDB8827143.1;Parent=gene-PN289_00625;Dbxref=NCBI_GP:MDB8827143.1;Name=MDB8827143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845582.1;locus_tag=PN289_00625;product=NCS2 family permease;protein_id=MDB8827143.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 141117 142736 . + . ID=gene-PN289_00630;Name=PN289_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00630 JAQMMZ010000001.1 Protein Homology CDS 141117 142736 . + 0 ID=cds-MDB8827144.1;Parent=gene-PN289_00630;Dbxref=NCBI_GP:MDB8827144.1;Name=MDB8827144.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007789379.1;locus_tag=PN289_00630;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827144.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 143135 143710 . + . ID=gene-PN289_00635;Name=PN289_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00635 JAQMMZ010000001.1 Protein Homology CDS 143135 143710 . + 0 ID=cds-MDB8827145.1;Parent=gene-PN289_00635;Dbxref=NCBI_GP:MDB8827145.1;Name=MDB8827145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845581.1;locus_tag=PN289_00635;product=recombinase family protein;protein_id=MDB8827145.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 143796 144419 . + . ID=gene-PN289_00640;Name=PN289_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00640 JAQMMZ010000001.1 Protein Homology CDS 143796 144419 . + 0 ID=cds-MDB8827146.1;Parent=gene-PN289_00640;Dbxref=NCBI_GP:MDB8827146.1;Name=MDB8827146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844675.1;locus_tag=PN289_00640;product=CoA pyrophosphatase;protein_id=MDB8827146.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 144670 144960 . + . ID=gene-PN289_00645;Name=PN289_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00645 JAQMMZ010000001.1 Protein Homology CDS 144670 144960 . + 0 ID=cds-MDB8827147.1;Parent=gene-PN289_00645;Dbxref=NCBI_GP:MDB8827147.1;Name=MDB8827147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003424145.1;locus_tag=PN289_00645;product=MTH1187 family thiamine-binding protein;protein_id=MDB8827147.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 144935 145735 . + . ID=gene-PN289_00650;Name=PN289_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00650 JAQMMZ010000001.1 Protein Homology CDS 144935 145735 . + 0 ID=cds-MDB8827148.1;Parent=gene-PN289_00650;Dbxref=NCBI_GP:MDB8827148.1;Name=MDB8827148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845579.1;locus_tag=PN289_00650;product=ABC transporter permease;protein_id=MDB8827148.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 145738 146757 . + . ID=gene-PN289_00655;Name=PN289_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00655 JAQMMZ010000001.1 Protein Homology CDS 145738 146757 . + 0 ID=cds-MDB8827149.1;Parent=gene-PN289_00655;Dbxref=NCBI_GP:MDB8827149.1;Name=MDB8827149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844714.1;locus_tag=PN289_00655;product=ABC transporter substrate-binding protein;protein_id=MDB8827149.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 146732 147448 . + . ID=gene-PN289_00660;Name=PN289_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00660 JAQMMZ010000001.1 Protein Homology CDS 146732 147448 . + 0 ID=cds-MDB8827150.1;Parent=gene-PN289_00660;Dbxref=NCBI_GP:MDB8827150.1;Name=MDB8827150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844718.1;locus_tag=PN289_00660;product=ABC transporter ATP-binding protein;protein_id=MDB8827150.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 147574 150249 . + . ID=gene-PN289_00665;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PN289_00665 JAQMMZ010000001.1 Protein Homology CDS 147574 150249 . + 0 ID=cds-MDB8827151.1;Parent=gene-PN289_00665;Dbxref=NCBI_GP:MDB8827151.1;Name=MDB8827151.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844716.1;locus_tag=PN289_00665;product=DNA mismatch repair protein MutS;protein_id=MDB8827151.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 150270 152153 . + . ID=gene-PN289_00670;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PN289_00670 JAQMMZ010000001.1 Protein Homology CDS 150270 152153 . + 0 ID=cds-MDB8827152.1;Parent=gene-PN289_00670;Dbxref=NCBI_GP:MDB8827152.1;Name=MDB8827152.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845576.1;locus_tag=PN289_00670;product=DNA mismatch repair endonuclease MutL;protein_id=MDB8827152.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 152156 153082 . + . ID=gene-PN289_00675;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PN289_00675 JAQMMZ010000001.1 Protein Homology CDS 152156 153082 . + 0 ID=cds-MDB8827153.1;Parent=gene-PN289_00675;Dbxref=NCBI_GP:MDB8827153.1;Name=MDB8827153.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845575.1;locus_tag=PN289_00675;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MDB8827153.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 153095 154369 . + . ID=gene-PN289_00680;Name=PN289_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00680 JAQMMZ010000001.1 Protein Homology CDS 153095 154369 . + 0 ID=cds-MDB8827154.1;Parent=gene-PN289_00680;Dbxref=NCBI_GP:MDB8827154.1;Name=MDB8827154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844699.1;locus_tag=PN289_00680;product=methionine gamma-lyase family protein;protein_id=MDB8827154.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 154468 154965 . - . ID=gene-PN289_00685;Name=PN289_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00685 JAQMMZ010000001.1 Protein Homology CDS 154468 154965 . - 0 ID=cds-MDB8827155.1;Parent=gene-PN289_00685;Dbxref=NCBI_GP:MDB8827155.1;Name=MDB8827155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844310.1;locus_tag=PN289_00685;product=prolyl-tRNA synthetase associated domain-containing protein;protein_id=MDB8827155.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 155664 157784 . + . ID=gene-PN289_00690;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PN289_00690 JAQMMZ010000001.1 Protein Homology CDS 155664 157784 . + 0 ID=cds-MDB8827156.1;Parent=gene-PN289_00690;Dbxref=NCBI_GP:MDB8827156.1;Name=MDB8827156.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844360.1;locus_tag=PN289_00690;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=MDB8827156.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 157960 158466 . + . ID=gene-PN289_00695;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PN289_00695 JAQMMZ010000001.1 Protein Homology CDS 157960 158466 . + 0 ID=cds-MDB8827157.1;Parent=gene-PN289_00695;Dbxref=NCBI_GP:MDB8827157.1;Name=MDB8827157.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;gene=nrdG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846446.1;locus_tag=PN289_00695;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=MDB8827157.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 158690 159010 . + . ID=gene-PN289_00700;Name=PN289_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00700 JAQMMZ010000001.1 Protein Homology CDS 158690 159010 . + 0 ID=cds-MDB8827158.1;Parent=gene-PN289_00700;Dbxref=NCBI_GP:MDB8827158.1;Name=MDB8827158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844304.1;locus_tag=PN289_00700;product=Fe-S cluster assembly protein HesB;protein_id=MDB8827158.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 159142 159879 . + . ID=gene-PN289_00705;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PN289_00705 JAQMMZ010000001.1 Protein Homology CDS 159142 159879 . + 0 ID=cds-MDB8827159.1;Parent=gene-PN289_00705;Dbxref=NCBI_GP:MDB8827159.1;Name=MDB8827159.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844367.1;locus_tag=PN289_00705;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=MDB8827159.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 159887 160708 . + . ID=gene-PN289_00710;Name=PN289_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00710 JAQMMZ010000001.1 Protein Homology CDS 159887 160708 . + 0 ID=cds-MDB8827160.1;Parent=gene-PN289_00710;Dbxref=NCBI_GP:MDB8827160.1;Name=MDB8827160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846443.1;locus_tag=PN289_00710;product=hypothetical protein;protein_id=MDB8827160.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 161199 164570 . - . ID=gene-PN289_00715;Name=PN289_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00715 JAQMMZ010000001.1 Protein Homology CDS 161199 164570 . - 0 ID=cds-MDB8827161.1;Parent=gene-PN289_00715;Dbxref=NCBI_GP:MDB8827161.1;Name=MDB8827161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016890.2;locus_tag=PN289_00715;product=cell wall-binding repeat-containing protein;protein_id=MDB8827161.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 164646 165686 . - . ID=gene-PN289_00720;Name=PN289_00720;end_range=165686,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00720;partial=true JAQMMZ010000001.1 GeneMarkS-2+ CDS 164646 165686 . - 0 ID=cds-MDB8827162.1;Parent=gene-PN289_00720;Dbxref=NCBI_GP:MDB8827162.1;Name=MDB8827162.1;end_range=165686,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00720;partial=true;product=hypothetical protein;protein_id=MDB8827162.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 165786 166311 . - . ID=gene-PN289_00725;Name=PN289_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00725;partial=true;start_range=.,165786 JAQMMZ010000001.1 GeneMarkS-2+ CDS 165786 166311 . - 0 ID=cds-MDB8827163.1;Parent=gene-PN289_00725;Dbxref=NCBI_GP:MDB8827163.1;Name=MDB8827163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00725;partial=true;product=hypothetical protein;protein_id=MDB8827163.1;start_range=.,165786;transl_table=11 JAQMMZ010000001.1 Genbank gene 166351 166677 . - . ID=gene-PN289_00730;Name=PN289_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00730 JAQMMZ010000001.1 GeneMarkS-2+ CDS 166351 166677 . - 0 ID=cds-MDB8827164.1;Parent=gene-PN289_00730;Dbxref=NCBI_GP:MDB8827164.1;Name=MDB8827164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00730;product=hypothetical protein;protein_id=MDB8827164.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 167033 167884 . + . ID=gene-PN289_00735;Name=PN289_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00735 JAQMMZ010000001.1 Protein Homology CDS 167033 167884 . + 0 ID=cds-MDB8827165.1;Parent=gene-PN289_00735;Dbxref=NCBI_GP:MDB8827165.1;Name=MDB8827165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844369.1;locus_tag=PN289_00735;product=DegV family protein;protein_id=MDB8827165.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 167944 168996 . - . ID=gene-PN289_00740;Name=PN289_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00740 JAQMMZ010000001.1 Protein Homology CDS 167944 168996 . - 0 ID=cds-MDB8827166.1;Parent=gene-PN289_00740;Dbxref=NCBI_GP:MDB8827166.1;Name=MDB8827166.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844358.1;locus_tag=PN289_00740;product=beta-eliminating lyase-related protein;protein_id=MDB8827166.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 169150 170283 . + . ID=gene-PN289_00745;Name=PN289_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00745 JAQMMZ010000001.1 Protein Homology CDS 169150 170283 . + 0 ID=cds-MDB8827167.1;Parent=gene-PN289_00745;Dbxref=NCBI_GP:MDB8827167.1;Name=MDB8827167.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595437.1;locus_tag=PN289_00745;product=tyrosine-type recombinase/integrase;protein_id=MDB8827167.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 170356 170991 . + . ID=gene-PN289_00750;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PN289_00750 JAQMMZ010000001.1 Protein Homology CDS 170356 170991 . + 0 ID=cds-MDB8827168.1;Parent=gene-PN289_00750;Dbxref=NCBI_GP:MDB8827168.1;Name=MDB8827168.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846437.1;locus_tag=PN289_00750;product=transcriptional repressor LexA;protein_id=MDB8827168.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 171099 171335 . - . ID=gene-PN289_00755;Name=PN289_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00755 JAQMMZ010000001.1 Protein Homology CDS 171099 171335 . - 0 ID=cds-MDB8827169.1;Parent=gene-PN289_00755;Dbxref=NCBI_GP:MDB8827169.1;Name=MDB8827169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844343.1;locus_tag=PN289_00755;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MDB8827169.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 171510 173270 . - . ID=gene-PN289_00760;Name=PN289_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00760 JAQMMZ010000001.1 Protein Homology CDS 171510 173270 . - 0 ID=cds-MDB8827170.1;Parent=gene-PN289_00760;Dbxref=NCBI_GP:MDB8827170.1;Name=MDB8827170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844364.1;locus_tag=PN289_00760;product=Na+/H+ antiporter NhaC family protein;protein_id=MDB8827170.1;transl_table=11 JAQMMZ010000001.1 cmsearch riboswitch 173404 173571 . - . ID=id-JAQMMZ010000001.1:173404..173571;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000001.1 Genbank gene 173687 174535 . - . ID=gene-PN289_00765;Name=PN289_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00765 JAQMMZ010000001.1 Protein Homology CDS 173687 174535 . - 0 ID=cds-MDB8827171.1;Parent=gene-PN289_00765;Dbxref=NCBI_GP:MDB8827171.1;Name=MDB8827171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844333.1;locus_tag=PN289_00765;product=ABC transporter ATP-binding protein;protein_id=MDB8827171.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 174529 175257 . - . ID=gene-PN289_00770;Name=PN289_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00770 JAQMMZ010000001.1 Protein Homology CDS 174529 175257 . - 0 ID=cds-MDB8827172.1;Parent=gene-PN289_00770;Dbxref=NCBI_GP:MDB8827172.1;Name=MDB8827172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846433.1;locus_tag=PN289_00770;product=ABC transporter ATP-binding protein;protein_id=MDB8827172.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 175247 175627 . - . ID=gene-PN289_00775;Name=PN289_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00775 JAQMMZ010000001.1 Protein Homology CDS 175247 175627 . - 0 ID=cds-MDB8827173.1;Parent=gene-PN289_00775;Dbxref=NCBI_GP:MDB8827173.1;Name=MDB8827173.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844294.1;locus_tag=PN289_00775;product=GntR family transcriptional regulator;protein_id=MDB8827173.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 175870 177036 . - . ID=gene-PN289_00780;Name=PN289_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00780 JAQMMZ010000001.1 Protein Homology CDS 175870 177036 . - 0 ID=cds-MDB8827174.1;Parent=gene-PN289_00780;Dbxref=NCBI_GP:MDB8827174.1;Name=MDB8827174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595434.1;locus_tag=PN289_00780;product=iron-containing alcohol dehydrogenase;protein_id=MDB8827174.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 177072 179078 . - . ID=gene-PN289_00785;Name=PN289_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00785 JAQMMZ010000001.1 Protein Homology CDS 177072 179078 . - 0 ID=cds-MDB8827175.1;Parent=gene-PN289_00785;Dbxref=NCBI_GP:MDB8827175.1;Name=MDB8827175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844356.1;locus_tag=PN289_00785;product=CPBP family intramembrane metalloprotease;protein_id=MDB8827175.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 179068 179853 . - . ID=gene-PN289_00790;Name=PN289_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00790 JAQMMZ010000001.1 Protein Homology CDS 179068 179853 . - 0 ID=cds-MDB8827176.1;Parent=gene-PN289_00790;Dbxref=NCBI_GP:MDB8827176.1;Name=MDB8827176.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844308.1;locus_tag=PN289_00790;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827176.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 180093 182288 . + . ID=gene-PN289_00795;Name=PN289_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00795 JAQMMZ010000001.1 Protein Homology CDS 180093 182288 . + 0 ID=cds-MDB8827177.1;Parent=gene-PN289_00795;Dbxref=NCBI_GP:MDB8827177.1;Name=MDB8827177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844344.1;locus_tag=PN289_00795;product=YhgE/Pip domain-containing protein;protein_id=MDB8827177.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 182457 183014 . - . ID=gene-PN289_00800;Name=PN289_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00800 JAQMMZ010000001.1 Protein Homology CDS 182457 183014 . - 0 ID=cds-MDB8827178.1;Parent=gene-PN289_00800;Dbxref=NCBI_GP:MDB8827178.1;Name=MDB8827178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846428.1;locus_tag=PN289_00800;product=tryptophan transporter;protein_id=MDB8827178.1;transl_table=11 JAQMMZ010000001.1 cmsearch binding_site 183223 183488 . - . ID=id-JAQMMZ010000001.1:183223..183488;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000001.1 Genbank gene 183564 184919 . - . ID=gene-PN289_00805;Name=PN289_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00805 JAQMMZ010000001.1 Protein Homology CDS 183564 184919 . - 0 ID=cds-MDB8827179.1;Parent=gene-PN289_00805;Dbxref=NCBI_GP:MDB8827179.1;Name=MDB8827179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846427.1;locus_tag=PN289_00805;product=cell wall-binding repeat-containing protein;protein_id=MDB8827179.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 185109 185930 . - . ID=gene-PN289_00810;Name=PN289_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00810 JAQMMZ010000001.1 Protein Homology CDS 185109 185930 . - 0 ID=cds-MDB8827180.1;Parent=gene-PN289_00810;Dbxref=NCBI_GP:MDB8827180.1;Name=MDB8827180.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846426.1;locus_tag=PN289_00810;product=Nif3-like dinuclear metal center hexameric protein;protein_id=MDB8827180.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 185967 186740 . - . ID=gene-PN289_00815;Name=PN289_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00815 JAQMMZ010000001.1 Protein Homology CDS 185967 186740 . - 0 ID=cds-MDB8827181.1;Parent=gene-PN289_00815;Dbxref=NCBI_GP:MDB8827181.1;Name=MDB8827181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846425.1;locus_tag=PN289_00815;product=class I SAM-dependent methyltransferase;protein_id=MDB8827181.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 186858 188015 . - . ID=gene-PN289_00820;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PN289_00820 JAQMMZ010000001.1 Protein Homology CDS 186858 188015 . - 0 ID=cds-MDB8827182.1;Parent=gene-PN289_00820;Dbxref=NCBI_GP:MDB8827182.1;Name=MDB8827182.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844311.1;locus_tag=PN289_00820;product=RNA polymerase sigma factor RpoD;protein_id=MDB8827182.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 188030 189868 . - . ID=gene-PN289_00825;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PN289_00825 JAQMMZ010000001.1 Protein Homology CDS 188030 189868 . - 0 ID=cds-MDB8827183.1;Parent=gene-PN289_00825;Dbxref=NCBI_GP:MDB8827183.1;Name=MDB8827183.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844345.1;locus_tag=PN289_00825;product=DNA primase;protein_id=MDB8827183.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 190150 191097 . - . ID=gene-PN289_00830;Name=PN289_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00830 JAQMMZ010000001.1 Protein Homology CDS 190150 191097 . - 0 ID=cds-MDB8827184.1;Parent=gene-PN289_00830;Dbxref=NCBI_GP:MDB8827184.1;Name=MDB8827184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844351.1;locus_tag=PN289_00830;product=hypothetical protein;protein_id=MDB8827184.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 191211 192077 . - . ID=gene-PN289_00835;Name=PN289_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00835 JAQMMZ010000001.1 Protein Homology CDS 191211 192077 . - 0 ID=cds-MDB8827185.1;Parent=gene-PN289_00835;Dbxref=NCBI_GP:MDB8827185.1;Name=MDB8827185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844349.1;locus_tag=PN289_00835;product=YitT family protein;protein_id=MDB8827185.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 192214 193656 . - . ID=gene-PN289_00840;Name=PN289_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00840 JAQMMZ010000001.1 Protein Homology CDS 192214 193656 . - 0 ID=cds-MDB8827186.1;Parent=gene-PN289_00840;Dbxref=NCBI_GP:MDB8827186.1;Name=MDB8827186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844298.1;locus_tag=PN289_00840;product=VanW family protein;protein_id=MDB8827186.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 193972 194652 . + . ID=gene-PN289_00845;Name=PN289_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00845 JAQMMZ010000001.1 Protein Homology CDS 193972 194652 . + 0 ID=cds-MDB8827187.1;Parent=gene-PN289_00845;Dbxref=NCBI_GP:MDB8827187.1;Name=MDB8827187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595431.1;locus_tag=PN289_00845;product=XRE family transcriptional regulator;protein_id=MDB8827187.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 194703 195095 . - . ID=gene-PN289_00850;Name=PN289_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00850 JAQMMZ010000001.1 Protein Homology CDS 194703 195095 . - 0 ID=cds-MDB8827188.1;Parent=gene-PN289_00850;Dbxref=NCBI_GP:MDB8827188.1;Name=MDB8827188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846410.1;locus_tag=PN289_00850;product=hypothetical protein;protein_id=MDB8827188.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 195231 195941 . - . ID=gene-PN289_00855;Name=PN289_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00855 JAQMMZ010000001.1 Protein Homology CDS 195231 195941 . - 0 ID=cds-MDB8827189.1;Parent=gene-PN289_00855;Dbxref=NCBI_GP:MDB8827189.1;Name=MDB8827189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844332.1;locus_tag=PN289_00855;product=ribonuclease H family protein;protein_id=MDB8827189.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 195976 196557 . - . ID=gene-PN289_00860;Name=PN289_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00860 JAQMMZ010000001.1 Protein Homology CDS 195976 196557 . - 0 ID=cds-MDB8827190.1;Parent=gene-PN289_00860;Dbxref=NCBI_GP:MDB8827190.1;Name=MDB8827190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844336.1;locus_tag=PN289_00860;product=VTT domain-containing protein;protein_id=MDB8827190.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 196838 197413 . - . ID=gene-PN289_00865;Name=PN289_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00865 JAQMMZ010000001.1 Protein Homology CDS 196838 197413 . - 0 ID=cds-MDB8827191.1;Parent=gene-PN289_00865;Dbxref=NCBI_GP:MDB8827191.1;Name=MDB8827191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595430.1;locus_tag=PN289_00865;product=zinc dependent phospholipase C family protein;protein_id=MDB8827191.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 197361 198365 . - . ID=gene-PN289_00870;Name=PN289_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00870 JAQMMZ010000001.1 Protein Homology CDS 197361 198365 . - 0 ID=cds-MDB8827192.1;Parent=gene-PN289_00870;Dbxref=NCBI_GP:MDB8827192.1;Name=MDB8827192.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846402.1;locus_tag=PN289_00870;product=TIGR01212 family radical SAM protein;protein_id=MDB8827192.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 198369 198923 . - . ID=gene-PN289_00875;Name=PN289_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00875 JAQMMZ010000001.1 Protein Homology CDS 198369 198923 . - 0 ID=cds-MDB8827193.1;Parent=gene-PN289_00875;Dbxref=NCBI_GP:MDB8827193.1;Name=MDB8827193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846401.1;locus_tag=PN289_00875;product=hypothetical protein;protein_id=MDB8827193.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 198984 199781 . - . ID=gene-PN289_00880;Name=PN289_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00880 JAQMMZ010000001.1 Protein Homology CDS 198984 199781 . - 0 ID=cds-MDB8827194.1;Parent=gene-PN289_00880;Dbxref=NCBI_GP:MDB8827194.1;Name=MDB8827194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844316.1;locus_tag=PN289_00880;product=HAD family hydrolase;protein_id=MDB8827194.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 199799 201061 . - . ID=gene-PN289_00885;Name=PN289_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00885 JAQMMZ010000001.1 Protein Homology CDS 199799 201061 . - 0 ID=cds-MDB8827195.1;Parent=gene-PN289_00885;Dbxref=NCBI_GP:MDB8827195.1;Name=MDB8827195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846399.1;locus_tag=PN289_00885;product=competence/damage-inducible protein A;protein_id=MDB8827195.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 201216 202118 . + . ID=gene-PN289_00890;Name=PN289_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00890 JAQMMZ010000001.1 Protein Homology CDS 201216 202118 . + 0 ID=cds-MDB8827196.1;Parent=gene-PN289_00890;Dbxref=NCBI_GP:MDB8827196.1;Name=MDB8827196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844297.1;locus_tag=PN289_00890;product=D-alanine--D-alanine ligase;protein_id=MDB8827196.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 202443 203009 . - . ID=gene-PN289_00895;Name=PN289_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00895 JAQMMZ010000001.1 Protein Homology CDS 202443 203009 . - 0 ID=cds-MDB8827197.1;Parent=gene-PN289_00895;Dbxref=NCBI_GP:MDB8827197.1;Name=MDB8827197.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844324.1;locus_tag=PN289_00895;product=thymidine kinase;protein_id=MDB8827197.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 203018 203485 . - . ID=gene-PN289_00900;Name=PN289_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00900 JAQMMZ010000001.1 Protein Homology CDS 203018 203485 . - 0 ID=cds-MDB8827198.1;Parent=gene-PN289_00900;Dbxref=NCBI_GP:MDB8827198.1;Name=MDB8827198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844339.1;locus_tag=PN289_00900;product=DUF2628 domain-containing protein;protein_id=MDB8827198.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 203520 205457 . - . ID=gene-PN289_00905;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PN289_00905 JAQMMZ010000001.1 Protein Homology CDS 203520 205457 . - 0 ID=cds-MDB8827199.1;Parent=gene-PN289_00905;Dbxref=NCBI_GP:MDB8827199.1;Name=MDB8827199.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846397.1;locus_tag=PN289_00905;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MDB8827199.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 205472 206320 . - . ID=gene-PN289_00910;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=PN289_00910 JAQMMZ010000001.1 Protein Homology CDS 205472 206320 . - 0 ID=cds-MDB8827200.1;Parent=gene-PN289_00910;Dbxref=NCBI_GP:MDB8827200.1;Name=MDB8827200.1;Ontology_term=GO:0009240,GO:0015968,GO:0046677,GO:0051745;gbkey=CDS;gene=ispH;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process|0009240||IEA,stringent response|0015968||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844331.1;locus_tag=PN289_00910;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=MDB8827200.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 206357 206962 . - . ID=gene-PN289_00915;Name=PN289_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00915 JAQMMZ010000001.1 Protein Homology CDS 206357 206962 . - 0 ID=cds-MDB8827201.1;Parent=gene-PN289_00915;Dbxref=NCBI_GP:MDB8827201.1;Name=MDB8827201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844357.1;locus_tag=PN289_00915;product=lysophospholipid acyltransferase family protein;protein_id=MDB8827201.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 206964 207626 . - . ID=gene-PN289_00920;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PN289_00920 JAQMMZ010000001.1 Protein Homology CDS 206964 207626 . - 0 ID=cds-MDB8827202.1;Parent=gene-PN289_00920;Dbxref=NCBI_GP:MDB8827202.1;Name=MDB8827202.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844303.1;locus_tag=PN289_00920;product=(d)CMP kinase;protein_id=MDB8827202.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 207656 209059 . - . ID=gene-PN289_00925;Name=PN289_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00925 JAQMMZ010000001.1 Protein Homology CDS 207656 209059 . - 0 ID=cds-MDB8827203.1;Parent=gene-PN289_00925;Dbxref=NCBI_GP:MDB8827203.1;Name=MDB8827203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844307.1;locus_tag=PN289_00925;product=aminoacetone oxidase family FAD-binding enzyme;protein_id=MDB8827203.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 209065 209709 . - . ID=gene-PN289_00930;Name=PN289_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00930 JAQMMZ010000001.1 Protein Homology CDS 209065 209709 . - 0 ID=cds-MDB8827204.1;Parent=gene-PN289_00930;Dbxref=NCBI_GP:MDB8827204.1;Name=MDB8827204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846390.1;locus_tag=PN289_00930;product=histidine phosphatase family protein;protein_id=MDB8827204.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 209795 210688 . - . ID=gene-PN289_00935;Name=PN289_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00935 JAQMMZ010000001.1 Protein Homology CDS 209795 210688 . - 0 ID=cds-MDB8827205.1;Parent=gene-PN289_00935;Dbxref=NCBI_GP:MDB8827205.1;Name=MDB8827205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595428.1;locus_tag=PN289_00935;product=MurR/RpiR family transcriptional regulator;protein_id=MDB8827205.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 210779 211495 . - . ID=gene-PN289_00940;Name=PN289_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00940 JAQMMZ010000001.1 Protein Homology CDS 210779 211495 . - 0 ID=cds-MDB8827206.1;Parent=gene-PN289_00940;Dbxref=NCBI_GP:MDB8827206.1;Name=MDB8827206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844366.1;locus_tag=PN289_00940;product=pseudouridine synthase;protein_id=MDB8827206.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 211610 212326 . - . ID=gene-PN289_00945;Name=PN289_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00945 JAQMMZ010000001.1 Protein Homology CDS 211610 212326 . - 0 ID=cds-MDB8827207.1;Parent=gene-PN289_00945;Dbxref=NCBI_GP:MDB8827207.1;Name=MDB8827207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844306.1;locus_tag=PN289_00945;product=hypothetical protein;protein_id=MDB8827207.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 212545 212967 . - . ID=gene-PN289_00950;Name=PN289_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00950 JAQMMZ010000001.1 Protein Homology CDS 212545 212967 . - 0 ID=cds-MDB8827208.1;Parent=gene-PN289_00950;Dbxref=NCBI_GP:MDB8827208.1;Name=MDB8827208.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=PN289_00950;product=integrase core domain-containing protein;protein_id=MDB8827208.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 212981 213319 . - . ID=gene-PN289_00955;Name=PN289_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00955 JAQMMZ010000001.1 GeneMarkS-2+ CDS 212981 213319 . - 0 ID=cds-MDB8827209.1;Parent=gene-PN289_00955;Dbxref=NCBI_GP:MDB8827209.1;Name=MDB8827209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_00955;product=hypothetical protein;protein_id=MDB8827209.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 213893 215287 . - . ID=gene-PN289_00960;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=PN289_00960 JAQMMZ010000001.1 Protein Homology CDS 213893 215287 . - 0 ID=cds-MDB8827210.1;Parent=gene-PN289_00960;Dbxref=NCBI_GP:MDB8827210.1;Name=MDB8827210.1;Ontology_term=GO:0006537,GO:0004355;gbkey=CDS;gene=gltA;go_function=glutamate synthase (NADPH) activity|0004355||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844292.1;locus_tag=PN289_00960;product=NADPH-dependent glutamate synthase;protein_id=MDB8827210.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 215287 216180 . - . ID=gene-PN289_00965;Name=PN289_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00965 JAQMMZ010000001.1 Protein Homology CDS 215287 216180 . - 0 ID=cds-MDB8827211.1;Parent=gene-PN289_00965;Dbxref=NCBI_GP:MDB8827211.1;Name=MDB8827211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007789384.1;locus_tag=PN289_00965;product=sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein;protein_id=MDB8827211.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 216444 217298 . + . ID=gene-PN289_00970;Name=PN289_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00970 JAQMMZ010000001.1 Protein Homology CDS 216444 217298 . + 0 ID=cds-MDB8827212.1;Parent=gene-PN289_00970;Dbxref=NCBI_GP:MDB8827212.1;Name=MDB8827212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844370.1;locus_tag=PN289_00970;product=sulfurtransferase;protein_id=MDB8827212.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 217671 218813 . + . ID=gene-PN289_00975;Name=PN289_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00975 JAQMMZ010000001.1 Protein Homology CDS 217671 218813 . + 0 ID=cds-MDB8827213.1;Parent=gene-PN289_00975;Dbxref=NCBI_GP:MDB8827213.1;Name=MDB8827213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844900.1;locus_tag=PN289_00975;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=MDB8827213.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 218830 219507 . + . ID=gene-PN289_00980;Name=PN289_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00980 JAQMMZ010000001.1 Protein Homology CDS 218830 219507 . + 0 ID=cds-MDB8827214.1;Parent=gene-PN289_00980;Dbxref=NCBI_GP:MDB8827214.1;Name=MDB8827214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844320.1;locus_tag=PN289_00980;product=ABC transporter ATP-binding protein;protein_id=MDB8827214.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 219509 220759 . + . ID=gene-PN289_00985;Name=PN289_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00985 JAQMMZ010000001.1 Protein Homology CDS 219509 220759 . + 0 ID=cds-MDB8827215.1;Parent=gene-PN289_00985;Dbxref=NCBI_GP:MDB8827215.1;Name=MDB8827215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844898.1;locus_tag=PN289_00985;product=ABC transporter permease;protein_id=MDB8827215.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 220812 222083 . + . ID=gene-PN289_00990;Name=PN289_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00990 JAQMMZ010000001.1 Protein Homology CDS 220812 222083 . + 0 ID=cds-MDB8827216.1;Parent=gene-PN289_00990;Dbxref=NCBI_GP:MDB8827216.1;Name=MDB8827216.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844341.1;locus_tag=PN289_00990;product=dihydroorotase;protein_id=MDB8827216.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 222177 222671 . - . ID=gene-PN289_00995;Name=PN289_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_00995 JAQMMZ010000001.1 Protein Homology CDS 222177 222671 . - 0 ID=cds-MDB8827217.1;Parent=gene-PN289_00995;Dbxref=NCBI_GP:MDB8827217.1;Name=MDB8827217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844354.1;locus_tag=PN289_00995;product=rubrerythrin;protein_id=MDB8827217.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 222878 223831 . + . ID=gene-PN289_01000;Name=PN289_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01000 JAQMMZ010000001.1 Protein Homology CDS 222878 223831 . + 0 ID=cds-MDB8827218.1;Parent=gene-PN289_01000;Dbxref=NCBI_GP:MDB8827218.1;Name=MDB8827218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844361.1;locus_tag=PN289_01000;product=polysaccharide deacetylase;protein_id=MDB8827218.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 223971 224426 . - . ID=gene-PN289_01005;Name=PN289_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01005 JAQMMZ010000001.1 Protein Homology CDS 223971 224426 . - 0 ID=cds-MDB8827219.1;Parent=gene-PN289_01005;Dbxref=NCBI_GP:MDB8827219.1;Name=MDB8827219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844290.1;locus_tag=PN289_01005;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=MDB8827219.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 224601 225635 . + . ID=gene-PN289_01010;Name=PN289_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01010 JAQMMZ010000001.1 Protein Homology CDS 224601 225635 . + 0 ID=cds-MDB8827220.1;Parent=gene-PN289_01010;Dbxref=NCBI_GP:MDB8827220.1;Name=MDB8827220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844317.1;locus_tag=PN289_01010;product=DUF1002 domain-containing protein;protein_id=MDB8827220.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 225760 226578 . - . ID=gene-PN289_01015;Name=PN289_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01015 JAQMMZ010000001.1 Protein Homology CDS 225760 226578 . - 0 ID=cds-MDB8827221.1;Parent=gene-PN289_01015;Dbxref=NCBI_GP:MDB8827221.1;Name=MDB8827221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011987989.1;locus_tag=PN289_01015;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=MDB8827221.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 226759 227412 . - . ID=gene-PN289_01020;Name=PN289_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01020 JAQMMZ010000001.1 Protein Homology CDS 226759 227412 . - 0 ID=cds-MDB8827222.1;Parent=gene-PN289_01020;Dbxref=NCBI_GP:MDB8827222.1;Name=MDB8827222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844325.1;locus_tag=PN289_01020;product=ABC transporter permease;protein_id=MDB8827222.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 227402 228370 . - . ID=gene-PN289_01025;Name=PN289_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01025 JAQMMZ010000001.1 Protein Homology CDS 227402 228370 . - 0 ID=cds-MDB8827223.1;Parent=gene-PN289_01025;Dbxref=NCBI_GP:MDB8827223.1;Name=MDB8827223.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844318.1;locus_tag=PN289_01025;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827223.1;transl_table=11 JAQMMZ010000001.1 cmsearch riboswitch 228436 228534 . - . ID=id-JAQMMZ010000001.1:228436..228534;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000001.1 Genbank gene 228701 229057 . - . ID=gene-PN289_01030;Name=PN289_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01030 JAQMMZ010000001.1 Protein Homology CDS 228701 229057 . - 0 ID=cds-MDB8827224.1;Parent=gene-PN289_01030;Dbxref=NCBI_GP:MDB8827224.1;Name=MDB8827224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595583.1;locus_tag=PN289_01030;product=hypothetical protein;protein_id=MDB8827224.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 229194 230498 . - . ID=gene-PN289_01035;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PN289_01035 JAQMMZ010000001.1 Protein Homology CDS 229194 230498 . - 0 ID=cds-MDB8827225.1;Parent=gene-PN289_01035;Dbxref=NCBI_GP:MDB8827225.1;Name=MDB8827225.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167377.1;locus_tag=PN289_01035;product=branched-chain amino acid transport system II carrier protein;protein_id=MDB8827225.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 231033 233627 . - . ID=gene-PN289_01040;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PN289_01040 JAQMMZ010000001.1 Protein Homology CDS 231033 233627 . - 0 ID=cds-MDB8827226.1;Parent=gene-PN289_01040;Dbxref=NCBI_GP:MDB8827226.1;Name=MDB8827226.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844048.1;locus_tag=PN289_01040;product=ATP-dependent chaperone ClpB;protein_id=MDB8827226.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 233628 234296 . - . ID=gene-PN289_01045;Name=PN289_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01045 JAQMMZ010000001.1 Protein Homology CDS 233628 234296 . - 0 ID=cds-MDB8827227.1;Parent=gene-PN289_01045;Dbxref=NCBI_GP:MDB8827227.1;Name=MDB8827227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167374.1;locus_tag=PN289_01045;product=hypothetical protein;protein_id=MDB8827227.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 234302 234721 . - . ID=gene-PN289_01050;Name=PN289_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01050 JAQMMZ010000001.1 Protein Homology CDS 234302 234721 . - 0 ID=cds-MDB8827228.1;Parent=gene-PN289_01050;Dbxref=NCBI_GP:MDB8827228.1;Name=MDB8827228.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844104.1;locus_tag=PN289_01050;product=replication/maintenance protein RepL;protein_id=MDB8827228.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 235074 236261 . + . ID=gene-PN289_01055;Name=PN289_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01055 JAQMMZ010000001.1 Protein Homology CDS 235074 236261 . + 0 ID=cds-MDB8827229.1;Parent=gene-PN289_01055;Dbxref=NCBI_GP:MDB8827229.1;Name=MDB8827229.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844114.1;locus_tag=PN289_01055;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=MDB8827229.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 236302 237315 . + . ID=gene-PN289_01060;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PN289_01060 JAQMMZ010000001.1 Protein Homology CDS 236302 237315 . + 0 ID=cds-MDB8827230.1;Parent=gene-PN289_01060;Dbxref=NCBI_GP:MDB8827230.1;Name=MDB8827230.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167372.1;locus_tag=PN289_01060;product=RIP metalloprotease RseP;protein_id=MDB8827230.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 237422 238477 . + . ID=gene-PN289_01065;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PN289_01065 JAQMMZ010000001.1 Protein Homology CDS 237422 238477 . + 0 ID=cds-MDB8827231.1;Parent=gene-PN289_01065;Dbxref=NCBI_GP:MDB8827231.1;Name=MDB8827231.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167371.1;locus_tag=PN289_01065;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=MDB8827231.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 238686 239609 . - . ID=gene-PN289_01070;Name=PN289_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01070 JAQMMZ010000001.1 Protein Homology CDS 238686 239609 . - 0 ID=cds-MDB8827232.1;Parent=gene-PN289_01070;Dbxref=NCBI_GP:MDB8827232.1;Name=MDB8827232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167370.1;locus_tag=PN289_01070;product=DUF4846 domain-containing protein;protein_id=MDB8827232.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 239629 240408 . - . ID=gene-PN289_01075;Name=PN289_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01075 JAQMMZ010000001.1 Protein Homology CDS 239629 240408 . - 0 ID=cds-MDB8827233.1;Parent=gene-PN289_01075;Dbxref=NCBI_GP:MDB8827233.1;Name=MDB8827233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844069.1;locus_tag=PN289_01075;product=phosphatidate cytidylyltransferase;protein_id=MDB8827233.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 240420 241151 . - . ID=gene-PN289_01080;Name=PN289_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01080 JAQMMZ010000001.1 Protein Homology CDS 240420 241151 . - 0 ID=cds-MDB8827234.1;Parent=gene-PN289_01080;Dbxref=NCBI_GP:MDB8827234.1;Name=MDB8827234.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844087.1;locus_tag=PN289_01080;product=isoprenyl transferase;protein_id=MDB8827234.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 241366 241923 . - . ID=gene-PN289_01085;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PN289_01085 JAQMMZ010000001.1 Protein Homology CDS 241366 241923 . - 0 ID=cds-MDB8827235.1;Parent=gene-PN289_01085;Dbxref=NCBI_GP:MDB8827235.1;Name=MDB8827235.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003430598.1;locus_tag=PN289_01085;product=ribosome recycling factor;protein_id=MDB8827235.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 242003 242710 . - . ID=gene-PN289_01090;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PN289_01090 JAQMMZ010000001.1 Protein Homology CDS 242003 242710 . - 0 ID=cds-MDB8827236.1;Parent=gene-PN289_01090;Dbxref=NCBI_GP:MDB8827236.1;Name=MDB8827236.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844026.1;locus_tag=PN289_01090;product=UMP kinase;protein_id=MDB8827236.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 242775 243683 . - . ID=gene-PN289_01095;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PN289_01095 JAQMMZ010000001.1 Protein Homology CDS 242775 243683 . - 0 ID=cds-MDB8827237.1;Parent=gene-PN289_01095;Dbxref=NCBI_GP:MDB8827237.1;Name=MDB8827237.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003424535.1;locus_tag=PN289_01095;product=translation elongation factor Ts;protein_id=MDB8827237.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 243842 244588 . - . ID=gene-PN289_01100;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PN289_01100 JAQMMZ010000001.1 Protein Homology CDS 243842 244588 . - 0 ID=cds-MDB8827238.1;Parent=gene-PN289_01100;Dbxref=NCBI_GP:MDB8827238.1;Name=MDB8827238.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844082.1;locus_tag=PN289_01100;product=30S ribosomal protein S2;protein_id=MDB8827238.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 244786 245886 . - . ID=gene-PN289_01105;Name=PN289_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01105 JAQMMZ010000001.1 Protein Homology CDS 244786 245886 . - 0 ID=cds-MDB8827239.1;Parent=gene-PN289_01105;Dbxref=NCBI_GP:MDB8827239.1;Name=MDB8827239.1;Ontology_term=GO:0006468,GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846378.1;locus_tag=PN289_01105;product=protein kinase;protein_id=MDB8827239.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 246184 246774 . + . ID=gene-PN289_01110;Name=PN289_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01110 JAQMMZ010000001.1 Protein Homology CDS 246184 246774 . + 0 ID=cds-MDB8827240.1;Parent=gene-PN289_01110;Dbxref=NCBI_GP:MDB8827240.1;Name=MDB8827240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844102.1;locus_tag=PN289_01110;product=hypothetical protein;protein_id=MDB8827240.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 246843 247874 . - . ID=gene-PN289_01115;Name=PN289_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01115 JAQMMZ010000001.1 Protein Homology CDS 246843 247874 . - 0 ID=cds-MDB8827241.1;Parent=gene-PN289_01115;Dbxref=NCBI_GP:MDB8827241.1;Name=MDB8827241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844097.1;locus_tag=PN289_01115;product=transglycosylase domain-containing protein;protein_id=MDB8827241.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 247908 248432 . - . ID=gene-PN289_01120;Name=PN289_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01120 JAQMMZ010000001.1 Protein Homology CDS 247908 248432 . - 0 ID=cds-MDB8827242.1;Parent=gene-PN289_01120;Dbxref=NCBI_GP:MDB8827242.1;Name=MDB8827242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595522.1;locus_tag=PN289_01120;product=3'-5' exonuclease;protein_id=MDB8827242.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 248442 249341 . - . ID=gene-PN289_01125;Name=PN289_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01125 JAQMMZ010000001.1 Protein Homology CDS 248442 249341 . - 0 ID=cds-MDB8827243.1;Parent=gene-PN289_01125;Dbxref=NCBI_GP:MDB8827243.1;Name=MDB8827243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845102.1;locus_tag=PN289_01125;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=MDB8827243.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 249384 251585 . - . ID=gene-PN289_01130;Name=PN289_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01130 JAQMMZ010000001.1 Protein Homology CDS 249384 251585 . - 0 ID=cds-MDB8827244.1;Parent=gene-PN289_01130;Dbxref=NCBI_GP:MDB8827244.1;Name=MDB8827244.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595521.1;locus_tag=PN289_01130;product=DNA topoisomerase;protein_id=MDB8827244.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 251790 253229 . - . ID=gene-PN289_01135;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PN289_01135 JAQMMZ010000001.1 Protein Homology CDS 251790 253229 . - 0 ID=cds-MDB8827245.1;Parent=gene-PN289_01135;Dbxref=NCBI_GP:MDB8827245.1;Name=MDB8827245.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844115.1;locus_tag=PN289_01135;product=amidophosphoribosyltransferase;protein_id=MDB8827245.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 253240 253944 . - . ID=gene-PN289_01140;Name=PN289_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01140 JAQMMZ010000001.1 Protein Homology CDS 253240 253944 . - 0 ID=cds-MDB8827246.1;Parent=gene-PN289_01140;Dbxref=NCBI_GP:MDB8827246.1;Name=MDB8827246.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844074.1;locus_tag=PN289_01140;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MDB8827246.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 254292 255938 . - . ID=gene-PN289_01145;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PN289_01145 JAQMMZ010000001.1 Protein Homology CDS 254292 255938 . - 0 ID=cds-MDB8827247.1;Parent=gene-PN289_01145;Dbxref=NCBI_GP:MDB8827247.1;Name=MDB8827247.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845108.1;locus_tag=PN289_01145;product=glutamate--tRNA ligase;protein_id=MDB8827247.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 256023 256910 . - . ID=gene-PN289_01150;Name=PN289_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01150 JAQMMZ010000001.1 Protein Homology CDS 256023 256910 . - 0 ID=cds-MDB8827248.1;Parent=gene-PN289_01150;Dbxref=NCBI_GP:MDB8827248.1;Name=MDB8827248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844101.1;locus_tag=PN289_01150;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=MDB8827248.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 256910 257716 . - . ID=gene-PN289_01155;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PN289_01155 JAQMMZ010000001.1 Protein Homology CDS 256910 257716 . - 0 ID=cds-MDB8827249.1;Parent=gene-PN289_01155;Dbxref=NCBI_GP:MDB8827249.1;Name=MDB8827249.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845110.1;locus_tag=PN289_01155;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=MDB8827249.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 257730 258548 . - . ID=gene-PN289_01160;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PN289_01160 JAQMMZ010000001.1 Protein Homology CDS 257730 258548 . - 0 ID=cds-MDB8827250.1;Parent=gene-PN289_01160;Dbxref=NCBI_GP:MDB8827250.1;Name=MDB8827250.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844066.1;locus_tag=PN289_01160;product=dihydropteroate synthase;protein_id=MDB8827250.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 258564 259139 . - . ID=gene-PN289_01165;Name=PN289_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01165 JAQMMZ010000001.1 Protein Homology CDS 258564 259139 . - 0 ID=cds-MDB8827251.1;Parent=gene-PN289_01165;Dbxref=NCBI_GP:MDB8827251.1;Name=MDB8827251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844036.1;locus_tag=PN289_01165;product=HD domain-containing protein;protein_id=MDB8827251.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 259140 259691 . - . ID=gene-PN289_01170;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PN289_01170 JAQMMZ010000001.1 Protein Homology CDS 259140 259691 . - 0 ID=cds-MDB8827252.1;Parent=gene-PN289_01170;Dbxref=NCBI_GP:MDB8827252.1;Name=MDB8827252.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002571179.1;locus_tag=PN289_01170;product=GTP cyclohydrolase I FolE;protein_id=MDB8827252.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 259876 260634 . - . ID=gene-PN289_01175;Name=PN289_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01175 JAQMMZ010000001.1 Protein Homology CDS 259876 260634 . - 0 ID=cds-MDB8827253.1;Parent=gene-PN289_01175;Dbxref=NCBI_GP:MDB8827253.1;Name=MDB8827253.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844050.1;locus_tag=PN289_01175;product=peptidylprolyl isomerase;protein_id=MDB8827253.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 261365 261835 . + . ID=gene-PN289_01180;Name=PN289_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01180 JAQMMZ010000001.1 Protein Homology CDS 261365 261835 . + 0 ID=cds-MDB8827254.1;Parent=gene-PN289_01180;Dbxref=NCBI_GP:MDB8827254.1;Name=MDB8827254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845112.1;locus_tag=PN289_01180;product=hypothetical protein;protein_id=MDB8827254.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 261928 262368 . - . ID=gene-PN289_01185;Name=PN289_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01185 JAQMMZ010000001.1 Protein Homology CDS 261928 262368 . - 0 ID=cds-MDB8827255.1;Parent=gene-PN289_01185;Dbxref=NCBI_GP:MDB8827255.1;Name=MDB8827255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844041.1;locus_tag=PN289_01185;product=CBS domain-containing protein;protein_id=MDB8827255.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 262624 262824 . - . ID=gene-PN289_01190;Name=PN289_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01190 JAQMMZ010000001.1 Protein Homology CDS 262624 262824 . - 0 ID=cds-MDB8827256.1;Parent=gene-PN289_01190;Dbxref=NCBI_GP:MDB8827256.1;Name=MDB8827256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=PN289_01190;product=cold-shock protein;protein_id=MDB8827256.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 263111 263941 . + . ID=gene-PN289_01195;Name=PN289_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01195 JAQMMZ010000001.1 Protein Homology CDS 263111 263941 . + 0 ID=cds-MDB8827257.1;Parent=gene-PN289_01195;Dbxref=NCBI_GP:MDB8827257.1;Name=MDB8827257.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844045.1;locus_tag=PN289_01195;product=pyridoxamine kinase;protein_id=MDB8827257.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 264143 264784 . - . ID=gene-PN289_01200;Name=PN289_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01200 JAQMMZ010000001.1 Protein Homology CDS 264143 264784 . - 0 ID=cds-MDB8827258.1;Parent=gene-PN289_01200;Dbxref=NCBI_GP:MDB8827258.1;Name=MDB8827258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844053.1;locus_tag=PN289_01200;product=hypothetical protein;protein_id=MDB8827258.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 265014 266510 . - . ID=gene-PN289_01205;Name=PN289_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01205 JAQMMZ010000001.1 Protein Homology CDS 265014 266510 . - 0 ID=cds-MDB8827259.1;Parent=gene-PN289_01205;Dbxref=NCBI_GP:MDB8827259.1;Name=MDB8827259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595519.1;locus_tag=PN289_01205;product=phosphomannomutase/phosphoglucomutase;protein_id=MDB8827259.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 266545 267195 . - . ID=gene-PN289_01210;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PN289_01210 JAQMMZ010000001.1 Protein Homology CDS 266545 267195 . - 0 ID=cds-MDB8827260.1;Parent=gene-PN289_01210;Dbxref=NCBI_GP:MDB8827260.1;Name=MDB8827260.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003423115.1;locus_tag=PN289_01210;product=fructose-6-phosphate aldolase;protein_id=MDB8827260.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 267539 269038 . + . ID=gene-PN289_01215;Name=PN289_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01215 JAQMMZ010000001.1 Protein Homology CDS 267539 269038 . + 0 ID=cds-MDB8827261.1;Parent=gene-PN289_01215;Dbxref=NCBI_GP:MDB8827261.1;Name=MDB8827261.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003430726.1;locus_tag=PN289_01215;product=IMP dehydrogenase;protein_id=MDB8827261.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 269203 269514 . - . ID=gene-PN289_01220;Name=PN289_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01220 JAQMMZ010000001.1 Protein Homology CDS 269203 269514 . - 0 ID=cds-MDB8827262.1;Parent=gene-PN289_01220;Dbxref=NCBI_GP:MDB8827262.1;Name=MDB8827262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844084.1;locus_tag=PN289_01220;product=hypothetical protein;protein_id=MDB8827262.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 269534 270808 . - . ID=gene-PN289_01225;Name=PN289_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01225 JAQMMZ010000001.1 Protein Homology CDS 269534 270808 . - 0 ID=cds-MDB8827263.1;Parent=gene-PN289_01225;Dbxref=NCBI_GP:MDB8827263.1;Name=MDB8827263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595518.1;locus_tag=PN289_01225;product=alanyl-tRNA editing protein;protein_id=MDB8827263.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 271004 271948 . - . ID=gene-PN289_01230;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PN289_01230 JAQMMZ010000001.1 Protein Homology CDS 271004 271948 . - 0 ID=cds-MDB8827264.1;Parent=gene-PN289_01230;Dbxref=NCBI_GP:MDB8827264.1;Name=MDB8827264.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844031.1;locus_tag=PN289_01230;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=MDB8827264.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 272057 272731 . - . ID=gene-PN289_01235;Name=PN289_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01235 JAQMMZ010000001.1 Protein Homology CDS 272057 272731 . - 0 ID=cds-MDB8827265.1;Parent=gene-PN289_01235;Dbxref=NCBI_GP:MDB8827265.1;Name=MDB8827265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844058.1;locus_tag=PN289_01235;product=Crp/Fnr family transcriptional regulator;protein_id=MDB8827265.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 272759 273922 . - . ID=gene-PN289_01240;Name=PN289_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01240 JAQMMZ010000001.1 Protein Homology CDS 272759 273922 . - 0 ID=cds-MDB8827266.1;Parent=gene-PN289_01240;Dbxref=NCBI_GP:MDB8827266.1;Name=MDB8827266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844077.1;locus_tag=PN289_01240;product=AI-2E family transporter;protein_id=MDB8827266.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 273925 275733 . - . ID=gene-PN289_01245;Name=PN289_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01245 JAQMMZ010000001.1 Protein Homology CDS 273925 275733 . - 0 ID=cds-MDB8827267.1;Parent=gene-PN289_01245;Dbxref=NCBI_GP:MDB8827267.1;Name=MDB8827267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844092.1;locus_tag=PN289_01245;product=ABC transporter ATP-binding protein;protein_id=MDB8827267.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 275717 277894 . - . ID=gene-PN289_01250;Name=PN289_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01250 JAQMMZ010000001.1 Protein Homology CDS 275717 277894 . - 0 ID=cds-MDB8827268.1;Parent=gene-PN289_01250;Dbxref=NCBI_GP:MDB8827268.1;Name=MDB8827268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844040.1;locus_tag=PN289_01250;product=ABC transporter ATP-binding protein;protein_id=MDB8827268.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 278047 279555 . - . ID=gene-PN289_01255;Name=PN289_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01255 JAQMMZ010000001.1 Protein Homology CDS 278047 279555 . - 0 ID=cds-MDB8827269.1;Parent=gene-PN289_01255;Dbxref=NCBI_GP:MDB8827269.1;Name=MDB8827269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844043.1;locus_tag=PN289_01255;product=SH3 domain-containing protein;protein_id=MDB8827269.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 279868 280632 . + . ID=gene-PN289_01260;Name=PN289_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01260 JAQMMZ010000001.1 Protein Homology CDS 279868 280632 . + 0 ID=cds-MDB8827270.1;Parent=gene-PN289_01260;Dbxref=NCBI_GP:MDB8827270.1;Name=MDB8827270.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845136.1;locus_tag=PN289_01260;product=NAD-dependent protein deacylase;protein_id=MDB8827270.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 280806 281246 . - . ID=gene-PN289_01265;Name=PN289_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01265 JAQMMZ010000001.1 Protein Homology CDS 280806 281246 . - 0 ID=cds-MDB8827271.1;Parent=gene-PN289_01265;Dbxref=NCBI_GP:MDB8827271.1;Name=MDB8827271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844071.1;locus_tag=PN289_01265;product=DUF4364 family protein;protein_id=MDB8827271.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 281469 281999 . - . ID=gene-PN289_01270;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=PN289_01270 JAQMMZ010000001.1 Protein Homology CDS 281469 281999 . - 0 ID=cds-MDB8827272.1;Parent=gene-PN289_01270;Dbxref=NCBI_GP:MDB8827272.1;Name=MDB8827272.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845953.1;locus_tag=PN289_01270;product=SMC-Scp complex subunit ScpB;protein_id=MDB8827272.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 282003 282740 . - . ID=gene-PN289_01275;Name=PN289_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01275 JAQMMZ010000001.1 Protein Homology CDS 282003 282740 . - 0 ID=cds-MDB8827273.1;Parent=gene-PN289_01275;Dbxref=NCBI_GP:MDB8827273.1;Name=MDB8827273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790304.1;locus_tag=PN289_01275;product=segregation/condensation protein A;protein_id=MDB8827273.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 282769 283380 . - . ID=gene-PN289_01280;Name=PN289_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01280 JAQMMZ010000001.1 Protein Homology CDS 282769 283380 . - 0 ID=cds-MDB8827274.1;Parent=gene-PN289_01280;Dbxref=NCBI_GP:MDB8827274.1;Name=MDB8827274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845951.1;locus_tag=PN289_01280;product=site-2 protease family protein;protein_id=MDB8827274.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 283512 285182 . - . ID=gene-PN289_01285;Name=PN289_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01285 JAQMMZ010000001.1 Protein Homology CDS 283512 285182 . - 0 ID=cds-MDB8827275.1;Parent=gene-PN289_01285;Dbxref=NCBI_GP:MDB8827275.1;Name=MDB8827275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845950.1;locus_tag=PN289_01285;product=ribonuclease J;protein_id=MDB8827275.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 285359 286108 . + . ID=gene-PN289_01290;Name=PN289_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01290 JAQMMZ010000001.1 Protein Homology CDS 285359 286108 . + 0 ID=cds-MDB8827276.1;Parent=gene-PN289_01290;Dbxref=NCBI_GP:MDB8827276.1;Name=MDB8827276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845948.1;locus_tag=PN289_01290;product=metal-dependent hydrolase;protein_id=MDB8827276.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 286300 286755 . - . ID=gene-PN289_01295;Name=PN289_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01295 JAQMMZ010000001.1 Protein Homology CDS 286300 286755 . - 0 ID=cds-MDB8827277.1;Parent=gene-PN289_01295;Dbxref=NCBI_GP:MDB8827277.1;Name=MDB8827277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844106.1;locus_tag=PN289_01295;product=Fur family transcriptional regulator;protein_id=MDB8827277.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 287031 287453 . - . ID=gene-PN289_01300;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PN289_01300 JAQMMZ010000001.1 Protein Homology CDS 287031 287453 . - 0 ID=cds-MDB8827278.1;Parent=gene-PN289_01300;Dbxref=NCBI_GP:MDB8827278.1;Name=MDB8827278.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846264.1;locus_tag=PN289_01300;product=Holliday junction resolvase RuvX;protein_id=MDB8827278.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 287447 289738 . - . ID=gene-PN289_01305;Name=PN289_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01305 JAQMMZ010000001.1 Protein Homology CDS 287447 289738 . - 0 ID=cds-MDB8827279.1;Parent=gene-PN289_01305;Dbxref=NCBI_GP:MDB8827279.1;Name=MDB8827279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595576.1;locus_tag=PN289_01305;product=hypothetical protein;protein_id=MDB8827279.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 289745 290005 . - . ID=gene-PN289_01310;Name=PN289_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01310 JAQMMZ010000001.1 Protein Homology CDS 289745 290005 . - 0 ID=cds-MDB8827280.1;Parent=gene-PN289_01310;Dbxref=NCBI_GP:MDB8827280.1;Name=MDB8827280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844039.1;locus_tag=PN289_01310;product=IreB family regulatory phosphoprotein;protein_id=MDB8827280.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 290104 290685 . - . ID=gene-PN289_01315;Name=PN289_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01315 JAQMMZ010000001.1 Protein Homology CDS 290104 290685 . - 0 ID=cds-MDB8827281.1;Parent=gene-PN289_01315;Dbxref=NCBI_GP:MDB8827281.1;Name=MDB8827281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844113.1;locus_tag=PN289_01315;product=phosphatase PAP2 family protein;protein_id=MDB8827281.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 290779 293415 . - . ID=gene-PN289_01320;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PN289_01320 JAQMMZ010000001.1 Protein Homology CDS 290779 293415 . - 0 ID=cds-MDB8827282.1;Parent=gene-PN289_01320;Dbxref=NCBI_GP:MDB8827282.1;Name=MDB8827282.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595577.1;locus_tag=PN289_01320;product=alanine--tRNA ligase;protein_id=MDB8827282.1;transl_table=11 JAQMMZ010000001.1 cmsearch binding_site 293538 293745 . - . ID=id-JAQMMZ010000001.1:293538..293745;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000001.1 Genbank gene 293855 294907 . - . ID=gene-PN289_01325;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PN289_01325 JAQMMZ010000001.1 Protein Homology CDS 293855 294907 . - 0 ID=cds-MDB8827283.1;Parent=gene-PN289_01325;Dbxref=NCBI_GP:MDB8827283.1;Name=MDB8827283.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844078.1;locus_tag=PN289_01325;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MDB8827283.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 295105 295563 . - . ID=gene-PN289_01330;Name=PN289_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01330 JAQMMZ010000001.1 Protein Homology CDS 295105 295563 . - 0 ID=cds-MDB8827284.1;Parent=gene-PN289_01330;Dbxref=NCBI_GP:MDB8827284.1;Name=MDB8827284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844070.1;locus_tag=PN289_01330;product=Rrf2 family transcriptional regulator;protein_id=MDB8827284.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 295656 296927 . - . ID=gene-PN289_01335;Name=PN289_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01335 JAQMMZ010000001.1 Protein Homology CDS 295656 296927 . - 0 ID=cds-MDB8827285.1;Parent=gene-PN289_01335;Dbxref=NCBI_GP:MDB8827285.1;Name=MDB8827285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846269.1;locus_tag=PN289_01335;product=replication-associated recombination protein A;protein_id=MDB8827285.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 297039 297815 . - . ID=gene-PN289_01340;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=PN289_01340 JAQMMZ010000001.1 Protein Homology CDS 297039 297815 . - 0 ID=cds-MDB8827286.1;Parent=gene-PN289_01340;Dbxref=NCBI_GP:MDB8827286.1;Name=MDB8827286.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844056.1;locus_tag=PN289_01340;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=MDB8827286.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 298051 300105 . - . ID=gene-PN289_01345;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PN289_01345 JAQMMZ010000001.1 Protein Homology CDS 298051 300105 . - 0 ID=cds-MDB8827287.1;Parent=gene-PN289_01345;Dbxref=NCBI_GP:MDB8827287.1;Name=MDB8827287.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844064.1;locus_tag=PN289_01345;product=type I DNA topoisomerase;protein_id=MDB8827287.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 300159 301430 . - . ID=gene-PN289_01350;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=PN289_01350 JAQMMZ010000001.1 Protein Homology CDS 300159 301430 . - 0 ID=cds-MDB8827288.1;Parent=gene-PN289_01350;Dbxref=NCBI_GP:MDB8827288.1;Name=MDB8827288.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846277.1;locus_tag=PN289_01350;product=DNA-processing protein DprA;protein_id=MDB8827288.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 301538 303133 . - . ID=gene-PN289_01355;Name=PN289_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01355 JAQMMZ010000001.1 Protein Homology CDS 301538 303133 . - 0 ID=cds-MDB8827289.1;Parent=gene-PN289_01355;Dbxref=NCBI_GP:MDB8827289.1;Name=MDB8827289.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846278.1;locus_tag=PN289_01355;product=YifB family Mg chelatase-like AAA ATPase;protein_id=MDB8827289.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 303289 303639 . - . ID=gene-PN289_01360;Name=PN289_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01360 JAQMMZ010000001.1 Protein Homology CDS 303289 303639 . - 0 ID=cds-MDB8827290.1;Parent=gene-PN289_01360;Dbxref=NCBI_GP:MDB8827290.1;Name=MDB8827290.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844080.1;locus_tag=PN289_01360;product=YraN family protein;protein_id=MDB8827290.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 303900 304919 . - . ID=gene-PN289_01365;Name=PN289_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01365 JAQMMZ010000001.1 Protein Homology CDS 303900 304919 . - 0 ID=cds-MDB8827291.1;Parent=gene-PN289_01365;Dbxref=NCBI_GP:MDB8827291.1;Name=MDB8827291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844076.1;locus_tag=PN289_01365;product=alpha-hydroxy-acid oxidizing protein;protein_id=MDB8827291.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 305039 305839 . - . ID=gene-PN289_01370;Name=PN289_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01370 JAQMMZ010000001.1 Protein Homology CDS 305039 305839 . - 0 ID=cds-MDB8827292.1;Parent=gene-PN289_01370;Dbxref=NCBI_GP:MDB8827292.1;Name=MDB8827292.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846281.1;locus_tag=PN289_01370;product=ribonuclease HII;protein_id=MDB8827292.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 305990 307153 . - . ID=gene-PN289_01375;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PN289_01375 JAQMMZ010000001.1 Protein Homology CDS 305990 307153 . - 0 ID=cds-MDB8827293.1;Parent=gene-PN289_01375;Dbxref=NCBI_GP:MDB8827293.1;Name=MDB8827293.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846282.1;locus_tag=PN289_01375;product=alanine racemase;protein_id=MDB8827293.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 307304 308191 . - . ID=gene-PN289_01380;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=PN289_01380 JAQMMZ010000001.1 Protein Homology CDS 307304 308191 . - 0 ID=cds-MDB8827294.1;Parent=gene-PN289_01380;Dbxref=NCBI_GP:MDB8827294.1;Name=MDB8827294.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844079.1;locus_tag=PN289_01380;product=ribosome biogenesis GTPase YlqF;protein_id=MDB8827294.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 308303 308659 . - . ID=gene-PN289_01385;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PN289_01385 JAQMMZ010000001.1 Protein Homology CDS 308303 308659 . - 0 ID=cds-MDB8827295.1;Parent=gene-PN289_01385;Dbxref=NCBI_GP:MDB8827295.1;Name=MDB8827295.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844108.1;locus_tag=PN289_01385;product=50S ribosomal protein L19;protein_id=MDB8827295.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 309058 310281 . + . ID=gene-PN289_01390;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PN289_01390 JAQMMZ010000001.1 Protein Homology CDS 309058 310281 . + 0 ID=cds-MDB8827296.1;Parent=gene-PN289_01390;Dbxref=NCBI_GP:MDB8827296.1;Name=MDB8827296.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846285.1;locus_tag=PN289_01390;product=tyrosine--tRNA ligase;protein_id=MDB8827296.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 310359 310742 . - . ID=gene-PN289_01395;Name=PN289_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01395 JAQMMZ010000001.1 Protein Homology CDS 310359 310742 . - 0 ID=cds-MDB8827297.1;Parent=gene-PN289_01395;Dbxref=NCBI_GP:MDB8827297.1;Name=MDB8827297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846286.1;locus_tag=PN289_01395;product=winged helix-turn-helix transcriptional regulator;protein_id=MDB8827297.1;transl_table=11 JAQMMZ010000001.1 Genbank gene 311192 312246 . - . ID=gene-PN289_01400;Name=ltrA;end_range=312246,.;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=PN289_01400;partial=true JAQMMZ010000001.1 Protein Homology CDS 311192 312246 . - 2 ID=cds-MDB8827298.1;Parent=gene-PN289_01400;Dbxref=NCBI_GP:MDB8827298.1;Name=MDB8827298.1;Ontology_term=GO:0000373,GO:0003964;end_range=312246,.;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001901474.1;locus_tag=PN289_01400;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=MDB8827298.1;transl_table=11 ##sequence-region JAQMMZ010000020.1 1 29518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000020.1 Genbank region 1 29518 . + . ID=JAQMMZ010000020.1:1..29518;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000020.1 Genbank gene 93 1142 . - . ID=gene-PN289_08110;Name=PN289_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08110 JAQMMZ010000020.1 Protein Homology CDS 93 1142 . - 0 ID=cds-MDB8828615.1;Parent=gene-PN289_08110;Dbxref=NCBI_GP:MDB8828615.1;Name=MDB8828615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846585.1;locus_tag=PN289_08110;product=FAD:protein FMN transferase;protein_id=MDB8828615.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 1255 1626 . + . ID=gene-PN289_08115;Name=PN289_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08115 JAQMMZ010000020.1 Protein Homology CDS 1255 1626 . + 0 ID=cds-MDB8828616.1;Parent=gene-PN289_08115;Dbxref=NCBI_GP:MDB8828616.1;Name=MDB8828616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846584.1;locus_tag=PN289_08115;product=NusG domain II-containing protein;protein_id=MDB8828616.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 1708 2382 . + . ID=gene-PN289_08120;Name=PN289_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08120 JAQMMZ010000020.1 Protein Homology CDS 1708 2382 . + 0 ID=cds-MDB8828617.1;Parent=gene-PN289_08120;Dbxref=NCBI_GP:MDB8828617.1;Name=MDB8828617.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416528.1;locus_tag=PN289_08120;product=uracil-DNA glycosylase;protein_id=MDB8828617.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 2476 2572 . + . ID=gene-PN289_08125;Name=PN289_08125;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_08125 JAQMMZ010000020.1 tRNAscan-SE tRNA 2476 2572 . + . ID=rna-PN289_08125;Parent=gene-PN289_08125;anticodon=(pos:2510..2512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08125;product=tRNA-Sec JAQMMZ010000020.1 tRNAscan-SE exon 2476 2572 . + . ID=exon-PN289_08125-1;Parent=rna-PN289_08125;anticodon=(pos:2510..2512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08125;product=tRNA-Sec JAQMMZ010000020.1 Genbank gene 2713 4461 . + . ID=gene-PN289_08130;Name=PN289_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08130 JAQMMZ010000020.1 Protein Homology CDS 2713 4461 . + 0 ID=cds-MDB8828618.1;Parent=gene-PN289_08130;Dbxref=NCBI_GP:MDB8828618.1;Name=MDB8828618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842705.1;locus_tag=PN289_08130;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MDB8828618.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 4722 5993 . + . ID=gene-PN289_08135;Name=PN289_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08135 JAQMMZ010000020.1 Protein Homology CDS 4722 5993 . + 0 ID=cds-MDB8828619.1;Parent=gene-PN289_08135;Dbxref=NCBI_GP:MDB8828619.1;Name=MDB8828619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842679.1;locus_tag=PN289_08135;product=double-cubane-cluster-containing anaerobic reductase;protein_id=MDB8828619.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 6088 6345 . + . ID=gene-PN289_08140;Name=PN289_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08140 JAQMMZ010000020.1 Protein Homology CDS 6088 6345 . + 0 ID=cds-MDB8828620.1;Parent=gene-PN289_08140;Dbxref=NCBI_GP:MDB8828620.1;Name=MDB8828620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006444380.1;locus_tag=PN289_08140;product=DUF3343 domain-containing protein;protein_id=MDB8828620.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 6357 7130 . + . ID=gene-PN289_08145;Name=PN289_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08145 JAQMMZ010000020.1 Protein Homology CDS 6357 7130 . + 0 ID=cds-MDB8828621.1;Parent=gene-PN289_08145;Dbxref=NCBI_GP:MDB8828621.1;Name=MDB8828621.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842695.1;locus_tag=PN289_08145;product=acyl-CoA dehydratase activase;protein_id=MDB8828621.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 7186 7899 . - . ID=gene-PN289_08150;Name=PN289_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08150 JAQMMZ010000020.1 Protein Homology CDS 7186 7899 . - 0 ID=cds-MDB8828622.1;Parent=gene-PN289_08150;Dbxref=NCBI_GP:MDB8828622.1;Name=MDB8828622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842650.1;locus_tag=PN289_08150;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=MDB8828622.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 8077 8937 . - . ID=gene-PN289_08155;Name=PN289_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08155 JAQMMZ010000020.1 Protein Homology CDS 8077 8937 . - 0 ID=cds-MDB8828623.1;Parent=gene-PN289_08155;Dbxref=NCBI_GP:MDB8828623.1;Name=MDB8828623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842658.1;locus_tag=PN289_08155;product=ComEC/Rec2 family competence protein;protein_id=MDB8828623.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 9284 10189 . + . ID=gene-PN289_08160;Name=PN289_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08160 JAQMMZ010000020.1 Protein Homology CDS 9284 10189 . + 0 ID=cds-MDB8828624.1;Parent=gene-PN289_08160;Dbxref=NCBI_GP:MDB8828624.1;Name=MDB8828624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595286.1;locus_tag=PN289_08160;product=phosphatidylglycerol lysyltransferase domain-containing protein;protein_id=MDB8828624.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 10199 11365 . + . ID=gene-PN289_08165;Name=PN289_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08165 JAQMMZ010000020.1 Protein Homology CDS 10199 11365 . + 0 ID=cds-MDB8828625.1;Parent=gene-PN289_08165;Dbxref=NCBI_GP:MDB8828625.1;Name=MDB8828625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846577.1;locus_tag=PN289_08165;product=GNAT family N-acetyltransferase;protein_id=MDB8828625.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 11501 12985 . + . ID=gene-PN289_08170;Name=PN289_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08170 JAQMMZ010000020.1 Protein Homology CDS 11501 12985 . + 0 ID=cds-MDB8828626.1;Parent=gene-PN289_08170;Dbxref=NCBI_GP:MDB8828626.1;Name=MDB8828626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842659.1;locus_tag=PN289_08170;product=ComEC/Rec2 family competence protein;protein_id=MDB8828626.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 13083 14114 . + . ID=gene-PN289_08175;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PN289_08175 JAQMMZ010000020.1 Protein Homology CDS 13083 14114 . + 0 ID=cds-MDB8828627.1;Parent=gene-PN289_08175;Dbxref=NCBI_GP:MDB8828627.1;Name=MDB8828627.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846575.1;locus_tag=PN289_08175;product=DNA polymerase III subunit delta;protein_id=MDB8828627.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 14432 14698 . - . ID=gene-PN289_08180;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PN289_08180 JAQMMZ010000020.1 Protein Homology CDS 14432 14698 . - 0 ID=cds-MDB8828628.1;Parent=gene-PN289_08180;Dbxref=NCBI_GP:MDB8828628.1;Name=MDB8828628.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890686.1;locus_tag=PN289_08180;product=30S ribosomal protein S20;protein_id=MDB8828628.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 14898 16703 . + . ID=gene-PN289_08185;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PN289_08185 JAQMMZ010000020.1 Protein Homology CDS 14898 16703 . + 0 ID=cds-MDB8828629.1;Parent=gene-PN289_08185;Dbxref=NCBI_GP:MDB8828629.1;Name=MDB8828629.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003430946.1;locus_tag=PN289_08185;product=translation elongation factor 4;protein_id=MDB8828629.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 16727 18010 . + . ID=gene-PN289_08190;Name=PN289_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08190 JAQMMZ010000020.1 Protein Homology CDS 16727 18010 . + 0 ID=cds-MDB8828630.1;Parent=gene-PN289_08190;Dbxref=NCBI_GP:MDB8828630.1;Name=MDB8828630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842652.1;locus_tag=PN289_08190;product=[cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme;protein_id=MDB8828630.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 18034 18897 . + . ID=gene-PN289_08195;Name=PN289_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08195 JAQMMZ010000020.1 Protein Homology CDS 18034 18897 . + 0 ID=cds-MDB8828631.1;Parent=gene-PN289_08195;Dbxref=NCBI_GP:MDB8828631.1;Name=MDB8828631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846573.1;locus_tag=PN289_08195;product=nitroreductase family protein;protein_id=MDB8828631.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 19022 20152 . + . ID=gene-PN289_08200;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PN289_08200 JAQMMZ010000020.1 Protein Homology CDS 19022 20152 . + 0 ID=cds-MDB8828632.1;Parent=gene-PN289_08200;Dbxref=NCBI_GP:MDB8828632.1;Name=MDB8828632.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595284.1;locus_tag=PN289_08200;product=radical SAM family heme chaperone HemW;protein_id=MDB8828632.1;transl_table=11 JAQMMZ010000020.1 cmsearch riboswitch 20452 20554 . + . ID=id-JAQMMZ010000020.1:20452..20554;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000020.1 Genbank gene 20786 21169 . + . ID=gene-PN289_08205;Name=PN289_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08205 JAQMMZ010000020.1 Protein Homology CDS 20786 21169 . + 0 ID=cds-MDB8828633.1;Parent=gene-PN289_08205;Dbxref=NCBI_GP:MDB8828633.1;Name=MDB8828633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846571.1;locus_tag=PN289_08205;product=GrdX family protein;protein_id=MDB8828633.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 21318 22262 . + . ID=gene-PN289_08210;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PN289_08210 JAQMMZ010000020.1 Protein Homology CDS 21318 22262 . + 0 ID=cds-MDB8828634.1;Parent=gene-PN289_08210;Dbxref=NCBI_GP:MDB8828634.1;Name=MDB8828634.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846569.1;locus_tag=PN289_08210;product=thioredoxin-disulfide reductase;protein_id=MDB8828634.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 22452 22769 . + . ID=gene-PN289_08215;Name=PN289_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08215 JAQMMZ010000020.1 Protein Homology CDS 22452 22769 . + 0 ID=cds-MDB8828635.1;Parent=gene-PN289_08215;Dbxref=NCBI_GP:MDB8828635.1;Name=MDB8828635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844646.1;locus_tag=PN289_08215;product=thioredoxin family protein;protein_id=MDB8828635.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 22995 24281 . + . ID=gene-PN289_08220;Name=PN289_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08220 JAQMMZ010000020.1 Protein Homology CDS 22995 24281 . + 0 ID=cds-MDB8828636.1;Parent=gene-PN289_08220;Dbxref=NCBI_GP:MDB8828636.1;Name=MDB8828636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006439082.1;locus_tag=PN289_08220;product=glycine/sarcosine/betaine reductase component B subunit;protein_id=MDB8828636.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 24590 25066 . + . ID=gene-PN289_08225;Name=grdA;gbkey=Gene;gene=grdA;gene_biotype=protein_coding;locus_tag=PN289_08225 JAQMMZ010000020.1 Protein Homology CDS 24590 25066 . + 0 ID=cds-MDB8828637.1;Parent=gene-PN289_08225;Dbxref=NCBI_GP:MDB8828637.1;Name=MDB8828637.1;gbkey=CDS;gene=grdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080547815.1;locus_tag=PN289_08225;product=glycine/sarcosine/betaine reductase complex selenoprotein A;protein_id=MDB8828637.1;transl_except=(pos:24722..24724%2Caa:Sec);transl_table=11 JAQMMZ010000020.1 Genbank gene 25086 26396 . + . ID=gene-PN289_08230;Name=grdB;gbkey=Gene;gene=grdB;gene_biotype=protein_coding;locus_tag=PN289_08230 JAQMMZ010000020.1 Protein Homology CDS 25086 26396 . + 0 ID=cds-MDB8828638.1;Parent=gene-PN289_08230;Dbxref=NCBI_GP:MDB8828638.1;Name=MDB8828638.1;Ontology_term=GO:0030699,GO:0030700;gbkey=CDS;gene=grdB;go_component=glycine reductase complex|0030700||IEA;go_function=glycine reductase activity|0030699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316653.1;locus_tag=PN289_08230;product=glycine reductase complex selenoprotein B;protein_id=MDB8828638.1;transl_except=(pos:26133..26135%2Caa:Sec);transl_table=11 JAQMMZ010000020.1 Genbank gene 26673 28205 . + . ID=gene-PN289_08235;Name=grdC;gbkey=Gene;gene=grdC;gene_biotype=protein_coding;locus_tag=PN289_08235 JAQMMZ010000020.1 Protein Homology CDS 26673 28205 . + 0 ID=cds-MDB8828639.1;Parent=gene-PN289_08235;Dbxref=NCBI_GP:MDB8828639.1;Name=MDB8828639.1;gbkey=CDS;gene=grdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014520415.1;locus_tag=PN289_08235;product=glycine/sarcosine/betaine reductase complex component C subunit beta;protein_id=MDB8828639.1;transl_table=11 JAQMMZ010000020.1 Genbank gene 28217 29359 . + . ID=gene-PN289_08240;Name=grdD;gbkey=Gene;gene=grdD;gene_biotype=protein_coding;locus_tag=PN289_08240 JAQMMZ010000020.1 Protein Homology CDS 28217 29359 . + 0 ID=cds-MDB8828640.1;Parent=gene-PN289_08240;Dbxref=NCBI_GP:MDB8828640.1;Name=MDB8828640.1;gbkey=CDS;gene=grdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844647.1;locus_tag=PN289_08240;product=glycine/sarcosine/betaine reductase complex component C subunit alpha;protein_id=MDB8828640.1;transl_table=11 ##sequence-region JAQMMZ010000021.1 1 28812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000021.1 Genbank region 1 28812 . + . ID=JAQMMZ010000021.1:1..28812;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000021.1 Genbank gene 233 790 . - . ID=gene-PN289_08245;Name=PN289_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08245 JAQMMZ010000021.1 Protein Homology CDS 233 790 . - 0 ID=cds-MDB8828641.1;Parent=gene-PN289_08245;Dbxref=NCBI_GP:MDB8828641.1;Name=MDB8828641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844753.1;locus_tag=PN289_08245;product=dihydrofolate reductase;protein_id=MDB8828641.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 799 1632 . - . ID=gene-PN289_08250;Name=PN289_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08250 JAQMMZ010000021.1 Protein Homology CDS 799 1632 . - 0 ID=cds-MDB8828642.1;Parent=gene-PN289_08250;Dbxref=NCBI_GP:MDB8828642.1;Name=MDB8828642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843727.1;locus_tag=PN289_08250;product=thymidylate synthase;protein_id=MDB8828642.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 2047 3240 . + . ID=gene-PN289_08255;Name=PN289_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08255 JAQMMZ010000021.1 Protein Homology CDS 2047 3240 . + 0 ID=cds-MDB8828643.1;Parent=gene-PN289_08255;Dbxref=NCBI_GP:MDB8828643.1;Name=MDB8828643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014520535.1;locus_tag=PN289_08255;product=iron-containing alcohol dehydrogenase;protein_id=MDB8828643.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 3545 4327 . + . ID=gene-PN289_08260;Name=PN289_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08260 JAQMMZ010000021.1 Protein Homology CDS 3545 4327 . + 0 ID=cds-MDB8828644.1;Parent=gene-PN289_08260;Dbxref=NCBI_GP:MDB8828644.1;Name=MDB8828644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844755.1;locus_tag=PN289_08260;product=hypothetical protein;protein_id=MDB8828644.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 4382 5254 . - . ID=gene-PN289_08265;Name=PN289_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08265 JAQMMZ010000021.1 Protein Homology CDS 4382 5254 . - 0 ID=cds-MDB8828645.1;Parent=gene-PN289_08265;Dbxref=NCBI_GP:MDB8828645.1;Name=MDB8828645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844756.1;locus_tag=PN289_08265;product=thermonuclease family protein;protein_id=MDB8828645.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 5377 5862 . - . ID=gene-PN289_08270;Name=PN289_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08270 JAQMMZ010000021.1 Protein Homology CDS 5377 5862 . - 0 ID=cds-MDB8828646.1;Parent=gene-PN289_08270;Dbxref=NCBI_GP:MDB8828646.1;Name=MDB8828646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844757.1;locus_tag=PN289_08270;product=GAF domain-containing protein;protein_id=MDB8828646.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 6067 9033 . + . ID=gene-PN289_08275;Name=PN289_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08275 JAQMMZ010000021.1 Protein Homology CDS 6067 9033 . + 0 ID=cds-MDB8828647.1;Parent=gene-PN289_08275;Dbxref=NCBI_GP:MDB8828647.1;Name=MDB8828647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844759.1;locus_tag=PN289_08275;product=SPOR domain-containing protein;protein_id=MDB8828647.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 9046 11028 . + . ID=gene-PN289_08280;Name=PN289_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08280 JAQMMZ010000021.1 Protein Homology CDS 9046 11028 . + 0 ID=cds-MDB8828648.1;Parent=gene-PN289_08280;Dbxref=NCBI_GP:MDB8828648.1;Name=MDB8828648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595346.1;locus_tag=PN289_08280;product=hypothetical protein;protein_id=MDB8828648.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 11028 11204 . + . ID=gene-PN289_08285;Name=PN289_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08285 JAQMMZ010000021.1 Protein Homology CDS 11028 11204 . + 0 ID=cds-MDB8828649.1;Parent=gene-PN289_08285;Dbxref=NCBI_GP:MDB8828649.1;Name=MDB8828649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843747.1;locus_tag=PN289_08285;product=hypothetical protein;protein_id=MDB8828649.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 11215 12234 . + . ID=gene-PN289_08290;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PN289_08290 JAQMMZ010000021.1 Protein Homology CDS 11215 12234 . + 0 ID=cds-MDB8828650.1;Parent=gene-PN289_08290;Dbxref=NCBI_GP:MDB8828650.1;Name=MDB8828650.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844761.1;locus_tag=PN289_08290;product=UDP-glucose 4-epimerase GalE;protein_id=MDB8828650.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 12245 13354 . + . ID=gene-PN289_08295;Name=PN289_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08295 JAQMMZ010000021.1 Protein Homology CDS 12245 13354 . + 0 ID=cds-MDB8828651.1;Parent=gene-PN289_08295;Dbxref=NCBI_GP:MDB8828651.1;Name=MDB8828651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595347.1;locus_tag=PN289_08295;product=DUF3798 domain-containing protein;protein_id=MDB8828651.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 13371 14537 . + . ID=gene-PN289_08300;Name=PN289_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08300 JAQMMZ010000021.1 Protein Homology CDS 13371 14537 . + 0 ID=cds-MDB8828652.1;Parent=gene-PN289_08300;Dbxref=NCBI_GP:MDB8828652.1;Name=MDB8828652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844765.1;locus_tag=PN289_08300;product=DUF3798 domain-containing protein;protein_id=MDB8828652.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 14655 15659 . + . ID=gene-PN289_08305;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=PN289_08305 JAQMMZ010000021.1 Protein Homology CDS 14655 15659 . + 0 ID=cds-MDB8828653.1;Parent=gene-PN289_08305;Dbxref=NCBI_GP:MDB8828653.1;Name=MDB8828653.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843785.1;locus_tag=PN289_08305;product=aspartate--ammonia ligase;protein_id=MDB8828653.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 15679 16203 . + . ID=gene-PN289_08310;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PN289_08310 JAQMMZ010000021.1 Protein Homology CDS 15679 16203 . + 0 ID=cds-MDB8828654.1;Parent=gene-PN289_08310;Dbxref=NCBI_GP:MDB8828654.1;Name=MDB8828654.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843759.1;locus_tag=PN289_08310;product=hypoxanthine phosphoribosyltransferase;protein_id=MDB8828654.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 16205 16990 . + . ID=gene-PN289_08315;Name=PN289_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08315 JAQMMZ010000021.1 Protein Homology CDS 16205 16990 . + 0 ID=cds-MDB8828655.1;Parent=gene-PN289_08315;Dbxref=NCBI_GP:MDB8828655.1;Name=MDB8828655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843819.1;locus_tag=PN289_08315;product=HAD family hydrolase;protein_id=MDB8828655.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 17000 18244 . + . ID=gene-PN289_08320;Name=PN289_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08320 JAQMMZ010000021.1 Protein Homology CDS 17000 18244 . + 0 ID=cds-MDB8828656.1;Parent=gene-PN289_08320;Dbxref=NCBI_GP:MDB8828656.1;Name=MDB8828656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844769.1;locus_tag=PN289_08320;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MDB8828656.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 18362 18823 . - . ID=gene-PN289_08325;Name=PN289_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08325 JAQMMZ010000021.1 Protein Homology CDS 18362 18823 . - 0 ID=cds-MDB8828657.1;Parent=gene-PN289_08325;Dbxref=NCBI_GP:MDB8828657.1;Name=MDB8828657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844770.1;locus_tag=PN289_08325;product=hypothetical protein;protein_id=MDB8828657.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 19108 20874 . + . ID=gene-PN289_08330;Name=PN289_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08330 JAQMMZ010000021.1 Protein Homology CDS 19108 20874 . + 0 ID=cds-MDB8828658.1;Parent=gene-PN289_08330;Dbxref=NCBI_GP:MDB8828658.1;Name=MDB8828658.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843738.1;locus_tag=PN289_08330;product=SpoIIE family protein phosphatase;protein_id=MDB8828658.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 21388 24921 . + . ID=gene-PN289_08335;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=PN289_08335 JAQMMZ010000021.1 Protein Homology CDS 21388 24921 . + 0 ID=cds-MDB8828659.1;Parent=gene-PN289_08335;Dbxref=NCBI_GP:MDB8828659.1;Name=MDB8828659.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843764.1;locus_tag=PN289_08335;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=MDB8828659.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 25246 26133 . + . ID=gene-PN289_08340;Name=PN289_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08340 JAQMMZ010000021.1 Protein Homology CDS 25246 26133 . + 0 ID=cds-MDB8828660.1;Parent=gene-PN289_08340;Dbxref=NCBI_GP:MDB8828660.1;Name=MDB8828660.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844773.1;locus_tag=PN289_08340;product=PRD domain-containing protein;protein_id=MDB8828660.1;transl_table=11 JAQMMZ010000021.1 Genbank gene 26418 28550 . + . ID=gene-PN289_08345;Name=PN289_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08345 JAQMMZ010000021.1 Protein Homology CDS 26418 28550 . + 0 ID=cds-MDB8828661.1;Parent=gene-PN289_08345;Dbxref=NCBI_GP:MDB8828661.1;Name=MDB8828661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843799.1;locus_tag=PN289_08345;product=maltose/glucose-specific PTS transporter subunit IIC;protein_id=MDB8828661.1;transl_table=11 ##sequence-region JAQMMZ010000022.1 1 25079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000022.1 Genbank region 1 25079 . + . ID=JAQMMZ010000022.1:1..25079;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000022.1 Genbank gene 458 3511 . + . ID=gene-PN289_08350;Name=PN289_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08350 JAQMMZ010000022.1 Protein Homology CDS 458 3511 . + 0 ID=cds-MDB8828662.1;Parent=gene-PN289_08350;Dbxref=NCBI_GP:MDB8828662.1;Name=MDB8828662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595581.1;locus_tag=PN289_08350;product=cell wall-binding repeat-containing protein;protein_id=MDB8828662.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 3602 4090 . - . ID=gene-PN289_08355;Name=PN289_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08355 JAQMMZ010000022.1 Protein Homology CDS 3602 4090 . - 0 ID=cds-MDB8828663.1;Parent=gene-PN289_08355;Dbxref=NCBI_GP:MDB8828663.1;Name=MDB8828663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844278.1;locus_tag=PN289_08355;product=Gx transporter family protein;protein_id=MDB8828663.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 4372 6156 . + . ID=gene-PN289_08360;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=PN289_08360 JAQMMZ010000022.1 Protein Homology CDS 4372 6156 . + 0 ID=cds-MDB8828664.1;Parent=gene-PN289_08360;Dbxref=NCBI_GP:MDB8828664.1;Name=MDB8828664.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845956.1;locus_tag=PN289_08360;product=oligoendopeptidase F;protein_id=MDB8828664.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 6147 7958 . + . ID=gene-PN289_08365;Name=PN289_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08365 JAQMMZ010000022.1 Protein Homology CDS 6147 7958 . + 0 ID=cds-MDB8828665.1;Parent=gene-PN289_08365;Dbxref=NCBI_GP:MDB8828665.1;Name=MDB8828665.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845957.1;locus_tag=PN289_08365;product=sigma 54-interacting transcriptional regulator;protein_id=MDB8828665.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 8333 9655 . + . ID=gene-PN289_08370;Name=PN289_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08370 JAQMMZ010000022.1 Protein Homology CDS 8333 9655 . + 0 ID=cds-MDB8828666.1;Parent=gene-PN289_08370;Dbxref=NCBI_GP:MDB8828666.1;Name=MDB8828666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845959.1;locus_tag=PN289_08370;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MDB8828666.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 9740 10417 . + . ID=gene-PN289_08375;Name=PN289_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08375 JAQMMZ010000022.1 Protein Homology CDS 9740 10417 . + 0 ID=cds-MDB8828667.1;Parent=gene-PN289_08375;Dbxref=NCBI_GP:MDB8828667.1;Name=MDB8828667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595393.1;locus_tag=PN289_08375;product=response regulator transcription factor;protein_id=MDB8828667.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 10419 11348 . + . ID=gene-PN289_08380;Name=PN289_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08380 JAQMMZ010000022.1 Protein Homology CDS 10419 11348 . + 0 ID=cds-MDB8828668.1;Parent=gene-PN289_08380;Dbxref=NCBI_GP:MDB8828668.1;Name=MDB8828668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PN289_08380;product=sensor histidine kinase;protein_id=MDB8828668.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 11531 12286 . + . ID=gene-PN289_08385;Name=PN289_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08385 JAQMMZ010000022.1 Protein Homology CDS 11531 12286 . + 0 ID=cds-MDB8828669.1;Parent=gene-PN289_08385;Dbxref=NCBI_GP:MDB8828669.1;Name=MDB8828669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844274.1;locus_tag=PN289_08385;product=ABC transporter ATP-binding protein;protein_id=MDB8828669.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 12287 14278 . + . ID=gene-PN289_08390;Name=PN289_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08390 JAQMMZ010000022.1 Protein Homology CDS 12287 14278 . + 0 ID=cds-MDB8828670.1;Parent=gene-PN289_08390;Dbxref=NCBI_GP:MDB8828670.1;Name=MDB8828670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845967.1;locus_tag=PN289_08390;product=ABC transporter permease;protein_id=MDB8828670.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 14718 18161 . + . ID=gene-PN289_08395;Name=PN289_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08395 JAQMMZ010000022.1 Protein Homology CDS 14718 18161 . + 0 ID=cds-MDB8828671.1;Parent=gene-PN289_08395;Dbxref=NCBI_GP:MDB8828671.1;Name=MDB8828671.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845968.1;locus_tag=PN289_08395;product=pyruvate carboxylase;protein_id=MDB8828671.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 18359 19675 . - . ID=gene-PN289_08400;Name=PN289_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08400 JAQMMZ010000022.1 Protein Homology CDS 18359 19675 . - 0 ID=cds-MDB8828672.1;Parent=gene-PN289_08400;Dbxref=NCBI_GP:MDB8828672.1;Name=MDB8828672.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845969.1;locus_tag=PN289_08400;product=amino acid permease;protein_id=MDB8828672.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 20118 22046 . + . ID=gene-PN289_08405;Name=PN289_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08405 JAQMMZ010000022.1 Protein Homology CDS 20118 22046 . + 0 ID=cds-MDB8828673.1;Parent=gene-PN289_08405;Dbxref=NCBI_GP:MDB8828673.1;Name=MDB8828673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845975.1;locus_tag=PN289_08405;product=elongation factor G;protein_id=MDB8828673.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 22207 23598 . + . ID=gene-PN289_08410;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PN289_08410 JAQMMZ010000022.1 Protein Homology CDS 22207 23598 . + 0 ID=cds-MDB8828674.1;Parent=gene-PN289_08410;Dbxref=NCBI_GP:MDB8828674.1;Name=MDB8828674.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843673.1;locus_tag=PN289_08410;product=DNA repair protein RadA;protein_id=MDB8828674.1;transl_table=11 JAQMMZ010000022.1 Genbank gene 23746 24825 . + . ID=gene-PN289_08415;Name=PN289_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08415 JAQMMZ010000022.1 Protein Homology CDS 23746 24825 . + 0 ID=cds-MDB8828675.1;Parent=gene-PN289_08415;Dbxref=NCBI_GP:MDB8828675.1;Name=MDB8828675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843672.1;locus_tag=PN289_08415;product=PIN domain-containing protein;protein_id=MDB8828675.1;transl_table=11 ##sequence-region JAQMMZ010000023.1 1 23262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000023.1 Genbank region 1 23262 . + . ID=JAQMMZ010000023.1:1..23262;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000023.1 Genbank gene 177 713 . + . ID=gene-PN289_08420;Name=PN289_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08420 JAQMMZ010000023.1 GeneMarkS-2+ CDS 177 713 . + 0 ID=cds-MDB8828676.1;Parent=gene-PN289_08420;Dbxref=NCBI_GP:MDB8828676.1;Name=MDB8828676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_08420;product=hypothetical protein;protein_id=MDB8828676.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 814 1386 . + . ID=gene-PN289_08425;Name=PN289_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08425 JAQMMZ010000023.1 GeneMarkS-2+ CDS 814 1386 . + 0 ID=cds-MDB8828677.1;Parent=gene-PN289_08425;Dbxref=NCBI_GP:MDB8828677.1;Name=MDB8828677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_08425;product=hypothetical protein;protein_id=MDB8828677.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 1502 3052 . - . ID=gene-PN289_08430;Name=PN289_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08430 JAQMMZ010000023.1 Protein Homology CDS 1502 3052 . - 0 ID=cds-MDB8828678.1;Parent=gene-PN289_08430;Dbxref=NCBI_GP:MDB8828678.1;Name=MDB8828678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018592108.1;locus_tag=PN289_08430;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MDB8828678.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 3205 5943 . + . ID=gene-PN289_08435;Name=PN289_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08435 JAQMMZ010000023.1 Protein Homology CDS 3205 5943 . + 0 ID=cds-MDB8828679.1;Parent=gene-PN289_08435;Dbxref=NCBI_GP:MDB8828679.1;Name=MDB8828679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843209.1;locus_tag=PN289_08435;product=transglycosylase domain-containing protein;protein_id=MDB8828679.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 6101 7744 . - . ID=gene-PN289_08440;Name=PN289_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08440 JAQMMZ010000023.1 Protein Homology CDS 6101 7744 . - 0 ID=cds-MDB8828680.1;Parent=gene-PN289_08440;Dbxref=NCBI_GP:MDB8828680.1;Name=MDB8828680.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845095.1;locus_tag=PN289_08440;product=DEAD/DEAH box helicase;protein_id=MDB8828680.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 7971 8981 . - . ID=gene-PN289_08445;Name=PN289_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08445 JAQMMZ010000023.1 Protein Homology CDS 7971 8981 . - 0 ID=cds-MDB8828681.1;Parent=gene-PN289_08445;Dbxref=NCBI_GP:MDB8828681.1;Name=MDB8828681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845406.1;locus_tag=PN289_08445;product=D-2-hydroxyacid dehydrogenase;protein_id=MDB8828681.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 9062 10075 . - . ID=gene-PN289_08450;Name=PN289_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08450 JAQMMZ010000023.1 Protein Homology CDS 9062 10075 . - 0 ID=cds-MDB8828682.1;Parent=gene-PN289_08450;Dbxref=NCBI_GP:MDB8828682.1;Name=MDB8828682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843234.1;locus_tag=PN289_08450;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=MDB8828682.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 10098 10883 . - . ID=gene-PN289_08455;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=protein_coding;locus_tag=PN289_08455 JAQMMZ010000023.1 Protein Homology CDS 10098 10883 . - 0 ID=cds-MDB8828683.1;Parent=gene-PN289_08455;Dbxref=NCBI_GP:MDB8828683.1;Name=MDB8828683.1;gbkey=CDS;gene=etfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012703997.1;locus_tag=PN289_08455;product=electron transfer flavoprotein subunit beta;protein_id=MDB8828683.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 10899 12041 . - . ID=gene-PN289_08460;Name=acdB;gbkey=Gene;gene=acdB;gene_biotype=protein_coding;locus_tag=PN289_08460 JAQMMZ010000023.1 Protein Homology CDS 10899 12041 . - 0 ID=cds-MDB8828684.1;Parent=gene-PN289_08460;Dbxref=NCBI_GP:MDB8828684.1;Name=MDB8828684.1;gbkey=CDS;gene=acdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014521062.1;locus_tag=PN289_08460;product=putative isocaproyl-CoA dehydrogenase AcdB;protein_id=MDB8828684.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 12065 13186 . - . ID=gene-PN289_08465;Name=PN289_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08465 JAQMMZ010000023.1 Protein Homology CDS 12065 13186 . - 0 ID=cds-MDB8828685.1;Parent=gene-PN289_08465;Dbxref=NCBI_GP:MDB8828685.1;Name=MDB8828685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845409.1;locus_tag=PN289_08465;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=MDB8828685.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 13186 14418 . - . ID=gene-PN289_08470;Name=PN289_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08470 JAQMMZ010000023.1 Protein Homology CDS 13186 14418 . - 0 ID=cds-MDB8828686.1;Parent=gene-PN289_08470;Dbxref=NCBI_GP:MDB8828686.1;Name=MDB8828686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843284.1;locus_tag=PN289_08470;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=MDB8828686.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 14527 15738 . - . ID=gene-PN289_08475;Name=PN289_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08475 JAQMMZ010000023.1 Protein Homology CDS 14527 15738 . - 0 ID=cds-MDB8828687.1;Parent=gene-PN289_08475;Dbxref=NCBI_GP:MDB8828687.1;Name=MDB8828687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843229.1;locus_tag=PN289_08475;product=CaiB/BaiF CoA-transferase family protein;protein_id=MDB8828687.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 16334 17503 . - . ID=gene-PN289_08480;Name=PN289_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08480 JAQMMZ010000023.1 Protein Homology CDS 16334 17503 . - 0 ID=cds-MDB8828688.1;Parent=gene-PN289_08480;Dbxref=NCBI_GP:MDB8828688.1;Name=MDB8828688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843243.1;locus_tag=PN289_08480;product=hypothetical protein;protein_id=MDB8828688.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 17616 19328 . - . ID=gene-PN289_08485;Name=PN289_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08485 JAQMMZ010000023.1 Protein Homology CDS 17616 19328 . - 0 ID=cds-MDB8828689.1;Parent=gene-PN289_08485;Dbxref=NCBI_GP:MDB8828689.1;Name=MDB8828689.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595241.1;locus_tag=PN289_08485;product=sigma 54-interacting transcriptional regulator;protein_id=MDB8828689.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 19823 20725 . - . ID=gene-PN289_08490;Name=PN289_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08490 JAQMMZ010000023.1 Protein Homology CDS 19823 20725 . - 0 ID=cds-MDB8828690.1;Parent=gene-PN289_08490;Dbxref=NCBI_GP:MDB8828690.1;Name=MDB8828690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845415.1;locus_tag=PN289_08490;product=patatin family protein;protein_id=MDB8828690.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 20743 21924 . - . ID=gene-PN289_08495;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PN289_08495 JAQMMZ010000023.1 Protein Homology CDS 20743 21924 . - 0 ID=cds-MDB8828691.1;Parent=gene-PN289_08495;Dbxref=NCBI_GP:MDB8828691.1;Name=MDB8828691.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845416.1;locus_tag=PN289_08495;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=MDB8828691.1;transl_table=11 JAQMMZ010000023.1 Genbank gene 21952 23115 . - . ID=gene-PN289_08500;Name=PN289_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08500 JAQMMZ010000023.1 Protein Homology CDS 21952 23115 . - 0 ID=cds-MDB8828692.1;Parent=gene-PN289_08500;Dbxref=NCBI_GP:MDB8828692.1;Name=MDB8828692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843225.1;locus_tag=PN289_08500;product=cysteine desulfurase family protein;protein_id=MDB8828692.1;transl_table=11 ##sequence-region JAQMMZ010000024.1 1 22945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000024.1 Genbank region 1 22945 . + . ID=JAQMMZ010000024.1:1..22945;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000024.1 Genbank pseudogene 223 371 . - . ID=gene-PN289_08505;Name=PN289_08505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08505;pseudo=true JAQMMZ010000024.1 Protein Homology CDS 223 371 . - 0 ID=cds-PN289_08505;Parent=gene-PN289_08505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019213953.1;locus_tag=PN289_08505;product=MobA/MobL family protein;pseudo=true;transl_table=11 JAQMMZ010000024.1 Genbank gene 655 945 . - . ID=gene-PN289_08510;Name=PN289_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08510 JAQMMZ010000024.1 Protein Homology CDS 655 945 . - 0 ID=cds-MDB8828693.1;Parent=gene-PN289_08510;Dbxref=NCBI_GP:MDB8828693.1;Name=MDB8828693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007516553.1;locus_tag=PN289_08510;product=DUF3847 domain-containing protein;protein_id=MDB8828693.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 1079 1336 . - . ID=gene-PN289_08515;Name=PN289_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08515 JAQMMZ010000024.1 Protein Homology CDS 1079 1336 . - 0 ID=cds-MDB8828694.1;Parent=gene-PN289_08515;Dbxref=NCBI_GP:MDB8828694.1;Name=MDB8828694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842962.1;locus_tag=PN289_08515;product=hypothetical protein;protein_id=MDB8828694.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 1366 1569 . - . ID=gene-PN289_08520;Name=PN289_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08520 JAQMMZ010000024.1 Protein Homology CDS 1366 1569 . - 0 ID=cds-MDB8828695.1;Parent=gene-PN289_08520;Dbxref=NCBI_GP:MDB8828695.1;Name=MDB8828695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006733062.1;locus_tag=PN289_08520;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828695.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 1572 1988 . - . ID=gene-PN289_08525;Name=PN289_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08525 JAQMMZ010000024.1 Protein Homology CDS 1572 1988 . - 0 ID=cds-MDB8828696.1;Parent=gene-PN289_08525;Dbxref=NCBI_GP:MDB8828696.1;Name=MDB8828696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000792450.1;locus_tag=PN289_08525;product=hypothetical protein;protein_id=MDB8828696.1;transl_table=11 JAQMMZ010000024.1 Genbank pseudogene 2393 2644 . - . ID=gene-PN289_08530;Name=PN289_08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08530;pseudo=true JAQMMZ010000024.1 Protein Homology CDS 2393 2644 . - 0 ID=cds-PN289_08530;Parent=gene-PN289_08530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007516553.1;locus_tag=PN289_08530;product=DUF3847 domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000024.1 Genbank gene 2866 4779 . - . ID=gene-PN289_08535;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PN289_08535 JAQMMZ010000024.1 Protein Homology CDS 2866 4779 . - 0 ID=cds-MDB8828697.1;Parent=gene-PN289_08535;Dbxref=NCBI_GP:MDB8828697.1;Name=MDB8828697.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842896.1;locus_tag=PN289_08535;product=lysine--tRNA ligase;protein_id=MDB8828697.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 4799 5284 . - . ID=gene-PN289_08540;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PN289_08540 JAQMMZ010000024.1 Protein Homology CDS 4799 5284 . - 0 ID=cds-MDB8828698.1;Parent=gene-PN289_08540;Dbxref=NCBI_GP:MDB8828698.1;Name=MDB8828698.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003422204.1;locus_tag=PN289_08540;product=transcription elongation factor GreA;protein_id=MDB8828698.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 5481 6440 . - . ID=gene-PN289_08545;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PN289_08545 JAQMMZ010000024.1 Protein Homology CDS 5481 6440 . - 0 ID=cds-MDB8828699.1;Parent=gene-PN289_08545;Dbxref=NCBI_GP:MDB8828699.1;Name=MDB8828699.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846696.1;locus_tag=PN289_08545;product=tRNA dihydrouridine synthase DusB;protein_id=MDB8828699.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 6450 7220 . - . ID=gene-PN289_08550;Name=PN289_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08550 JAQMMZ010000024.1 Protein Homology CDS 6450 7220 . - 0 ID=cds-MDB8828700.1;Parent=gene-PN289_08550;Dbxref=NCBI_GP:MDB8828700.1;Name=MDB8828700.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842908.1;locus_tag=PN289_08550;product=type III pantothenate kinase;protein_id=MDB8828700.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 7487 8470 . + . ID=gene-PN289_08555;Name=PN289_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08555 JAQMMZ010000024.1 Protein Homology CDS 7487 8470 . + 0 ID=cds-MDB8828701.1;Parent=gene-PN289_08555;Dbxref=NCBI_GP:MDB8828701.1;Name=MDB8828701.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595591.1;locus_tag=PN289_08555;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=MDB8828701.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 8545 9210 . - . ID=gene-PN289_08560;Name=PN289_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08560 JAQMMZ010000024.1 Protein Homology CDS 8545 9210 . - 0 ID=cds-MDB8828702.1;Parent=gene-PN289_08560;Dbxref=NCBI_GP:MDB8828702.1;Name=MDB8828702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895404.1;locus_tag=PN289_08560;product=ABC transporter ATP-binding protein;protein_id=MDB8828702.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 9221 11635 . - . ID=gene-PN289_08565;Name=PN289_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08565 JAQMMZ010000024.1 Protein Homology CDS 9221 11635 . - 0 ID=cds-MDB8828703.1;Parent=gene-PN289_08565;Dbxref=NCBI_GP:MDB8828703.1;Name=MDB8828703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846692.1;locus_tag=PN289_08565;product=ABC transporter permease;protein_id=MDB8828703.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 12033 12977 . + . ID=gene-PN289_08570;Name=PN289_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08570 JAQMMZ010000024.1 Protein Homology CDS 12033 12977 . + 0 ID=cds-MDB8828704.1;Parent=gene-PN289_08570;Dbxref=NCBI_GP:MDB8828704.1;Name=MDB8828704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846691.1;locus_tag=PN289_08570;product=ATP-binding protein;protein_id=MDB8828704.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 13070 13804 . + . ID=gene-PN289_08575;Name=PN289_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08575 JAQMMZ010000024.1 Protein Homology CDS 13070 13804 . + 0 ID=cds-MDB8828705.1;Parent=gene-PN289_08575;Dbxref=NCBI_GP:MDB8828705.1;Name=MDB8828705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842903.1;locus_tag=PN289_08575;product=LytTR family DNA-binding domain-containing protein;protein_id=MDB8828705.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 13807 14547 . - . ID=gene-PN289_08580;Name=PN289_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08580 JAQMMZ010000024.1 Protein Homology CDS 13807 14547 . - 0 ID=cds-MDB8828706.1;Parent=gene-PN289_08580;Dbxref=NCBI_GP:MDB8828706.1;Name=MDB8828706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595593.1;locus_tag=PN289_08580;product=MerR family transcriptional regulator;protein_id=MDB8828706.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 14755 14964 . - . ID=gene-PN289_08585;Name=PN289_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08585 JAQMMZ010000024.1 Protein Homology CDS 14755 14964 . - 0 ID=cds-MDB8828707.1;Parent=gene-PN289_08585;Dbxref=NCBI_GP:MDB8828707.1;Name=MDB8828707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005342572.1;locus_tag=PN289_08585;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828707.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 14973 15179 . - . ID=gene-PN289_08590;Name=PN289_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08590 JAQMMZ010000024.1 Protein Homology CDS 14973 15179 . - 0 ID=cds-MDB8828708.1;Parent=gene-PN289_08590;Dbxref=NCBI_GP:MDB8828708.1;Name=MDB8828708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039453.1;locus_tag=PN289_08590;product=hypothetical protein;protein_id=MDB8828708.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 15464 15859 . - . ID=gene-PN289_08595;Name=PN289_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08595 JAQMMZ010000024.1 GeneMarkS-2+ CDS 15464 15859 . - 0 ID=cds-MDB8828709.1;Parent=gene-PN289_08595;Dbxref=NCBI_GP:MDB8828709.1;Name=MDB8828709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_08595;product=hypothetical protein;protein_id=MDB8828709.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 16237 18114 . - . ID=gene-PN289_08600;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PN289_08600 JAQMMZ010000024.1 Protein Homology CDS 16237 18114 . - 0 ID=cds-MDB8828710.1;Parent=gene-PN289_08600;Dbxref=NCBI_GP:MDB8828710.1;Name=MDB8828710.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842955.1;locus_tag=PN289_08600;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MDB8828710.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 18138 19526 . - . ID=gene-PN289_08605;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PN289_08605 JAQMMZ010000024.1 Protein Homology CDS 18138 19526 . - 0 ID=cds-MDB8828711.1;Parent=gene-PN289_08605;Dbxref=NCBI_GP:MDB8828711.1;Name=MDB8828711.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595596.1;locus_tag=PN289_08605;product=tRNA lysidine(34) synthetase TilS;protein_id=MDB8828711.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 19528 19941 . - . ID=gene-PN289_08610;Name=PN289_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08610 JAQMMZ010000024.1 Protein Homology CDS 19528 19941 . - 0 ID=cds-MDB8828712.1;Parent=gene-PN289_08610;Dbxref=NCBI_GP:MDB8828712.1;Name=MDB8828712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843016.1;locus_tag=PN289_08610;product=DUF1934 domain-containing protein;protein_id=MDB8828712.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 19952 20758 . - . ID=gene-PN289_08615;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PN289_08615 JAQMMZ010000024.1 Protein Homology CDS 19952 20758 . - 0 ID=cds-MDB8828713.1;Parent=gene-PN289_08615;Dbxref=NCBI_GP:MDB8828713.1;Name=MDB8828713.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003425992.1;locus_tag=PN289_08615;product=glutamate racemase;protein_id=MDB8828713.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 20761 21438 . - . ID=gene-PN289_08620;Name=PN289_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08620 JAQMMZ010000024.1 Protein Homology CDS 20761 21438 . - 0 ID=cds-MDB8828714.1;Parent=gene-PN289_08620;Dbxref=NCBI_GP:MDB8828714.1;Name=MDB8828714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842981.1;locus_tag=PN289_08620;product=GntR family transcriptional regulator;protein_id=MDB8828714.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 21425 22321 . - . ID=gene-PN289_08625;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PN289_08625 JAQMMZ010000024.1 Protein Homology CDS 21425 22321 . - 0 ID=cds-MDB8828715.1;Parent=gene-PN289_08625;Dbxref=NCBI_GP:MDB8828715.1;Name=MDB8828715.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843079.1;locus_tag=PN289_08625;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=MDB8828715.1;transl_table=11 JAQMMZ010000024.1 Genbank gene 22486 22743 . - . ID=gene-PN289_08630;Name=PN289_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08630 JAQMMZ010000024.1 Protein Homology CDS 22486 22743 . - 0 ID=cds-MDB8828716.1;Parent=gene-PN289_08630;Dbxref=NCBI_GP:MDB8828716.1;Name=MDB8828716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846684.1;locus_tag=PN289_08630;product=Veg family protein;protein_id=MDB8828716.1;transl_table=11 ##sequence-region JAQMMZ010000025.1 1 21565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000025.1 Genbank region 1 21565 . + . ID=JAQMMZ010000025.1:1..21565;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000025.1 Genbank gene 335 775 . + . ID=gene-PN289_08635;Name=PN289_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08635 JAQMMZ010000025.1 Protein Homology CDS 335 775 . + 0 ID=cds-MDB8828717.1;Parent=gene-PN289_08635;Dbxref=NCBI_GP:MDB8828717.1;Name=MDB8828717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843480.1;locus_tag=PN289_08635;product=hypothetical protein;protein_id=MDB8828717.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 876 4394 . + . ID=gene-PN289_08640;Name=PN289_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08640 JAQMMZ010000025.1 Protein Homology CDS 876 4394 . + 0 ID=cds-MDB8828718.1;Parent=gene-PN289_08640;Dbxref=NCBI_GP:MDB8828718.1;Name=MDB8828718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843476.1;locus_tag=PN289_08640;product=cell wall-binding repeat-containing protein;protein_id=MDB8828718.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 4525 6714 . + . ID=gene-PN289_08645;Name=PN289_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08645 JAQMMZ010000025.1 Protein Homology CDS 4525 6714 . + 0 ID=cds-MDB8828719.1;Parent=gene-PN289_08645;Dbxref=NCBI_GP:MDB8828719.1;Name=MDB8828719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843464.1;locus_tag=PN289_08645;product=cell wall-binding repeat-containing protein;protein_id=MDB8828719.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 6867 7844 . + . ID=gene-PN289_08650;Name=PN289_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08650 JAQMMZ010000025.1 Protein Homology CDS 6867 7844 . + 0 ID=cds-MDB8828720.1;Parent=gene-PN289_08650;Dbxref=NCBI_GP:MDB8828720.1;Name=MDB8828720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846326.1;locus_tag=PN289_08650;product=peptidylprolyl isomerase;protein_id=MDB8828720.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 8063 9151 . + . ID=gene-PN289_08655;Name=PN289_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08655 JAQMMZ010000025.1 Protein Homology CDS 8063 9151 . + 0 ID=cds-MDB8828721.1;Parent=gene-PN289_08655;Dbxref=NCBI_GP:MDB8828721.1;Name=MDB8828721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595601.1;locus_tag=PN289_08655;product=cell wall-binding repeat-containing protein;protein_id=MDB8828721.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 9391 10479 . + . ID=gene-PN289_08660;Name=PN289_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08660 JAQMMZ010000025.1 Protein Homology CDS 9391 10479 . + 0 ID=cds-MDB8828722.1;Parent=gene-PN289_08660;Dbxref=NCBI_GP:MDB8828722.1;Name=MDB8828722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595601.1;locus_tag=PN289_08660;product=cell wall-binding repeat-containing protein;protein_id=MDB8828722.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 10577 11890 . - . ID=gene-PN289_08665;Name=prdC;gbkey=Gene;gene=prdC;gene_biotype=protein_coding;locus_tag=PN289_08665 JAQMMZ010000025.1 Protein Homology CDS 10577 11890 . - 0 ID=cds-MDB8828723.1;Parent=gene-PN289_08665;Dbxref=NCBI_GP:MDB8828723.1;Name=MDB8828723.1;gbkey=CDS;gene=prdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843473.1;locus_tag=PN289_08665;product=proline reductase-associated electron transfer protein PrdC;protein_id=MDB8828723.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 12276 14042 . + . ID=gene-PN289_08670;Name=PN289_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08670 JAQMMZ010000025.1 Protein Homology CDS 12276 14042 . + 0 ID=cds-MDB8828724.1;Parent=gene-PN289_08670;Dbxref=NCBI_GP:MDB8828724.1;Name=MDB8828724.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846323.1;locus_tag=PN289_08670;product=sigma 54-interacting transcriptional regulator;protein_id=MDB8828724.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 14894 16801 . + . ID=gene-PN289_08675;Name=prdA;gbkey=Gene;gene=prdA;gene_biotype=protein_coding;locus_tag=PN289_08675 JAQMMZ010000025.1 Protein Homology CDS 14894 16801 . + 0 ID=cds-MDB8828725.1;Parent=gene-PN289_08675;Dbxref=NCBI_GP:MDB8828725.1;Name=MDB8828725.1;Ontology_term=GO:0050002;gbkey=CDS;gene=prdA;go_function=D-proline reductase (dithiol) activity|0050002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846321.1;locus_tag=PN289_08675;product=D-proline reductase (dithiol) proprotein PrdA;protein_id=MDB8828725.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 16858 17223 . + . ID=gene-PN289_08680;Name=PN289_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08680 JAQMMZ010000025.1 Protein Homology CDS 16858 17223 . + 0 ID=cds-MDB8828726.1;Parent=gene-PN289_08680;Dbxref=NCBI_GP:MDB8828726.1;Name=MDB8828726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846319.1;locus_tag=PN289_08680;product=hypothetical protein;protein_id=MDB8828726.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 17249 17980 . + . ID=gene-PN289_08685;Name=prdB;gbkey=Gene;gene=prdB;gene_biotype=protein_coding;locus_tag=PN289_08685 JAQMMZ010000025.1 Protein Homology CDS 17249 17980 . + 0 ID=cds-MDB8828727.1;Parent=gene-PN289_08685;Dbxref=NCBI_GP:MDB8828727.1;Name=MDB8828727.1;gbkey=CDS;gene=prdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846515.1;locus_tag=PN289_08685;product=D-proline reductase (dithiol) protein PrdB;protein_id=MDB8828727.1;transl_except=(pos:17705..17707%2Caa:Sec);transl_table=11 JAQMMZ010000025.1 Genbank gene 18111 18869 . + . ID=gene-PN289_08690;Name=prdD;gbkey=Gene;gene=prdD;gene_biotype=protein_coding;locus_tag=PN289_08690 JAQMMZ010000025.1 Protein Homology CDS 18111 18869 . + 0 ID=cds-MDB8828728.1;Parent=gene-PN289_08690;Dbxref=NCBI_GP:MDB8828728.1;Name=MDB8828728.1;gbkey=CDS;gene=prdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843462.1;locus_tag=PN289_08690;product=proline reductase cluster protein PrdD;protein_id=MDB8828728.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 18881 19348 . + . ID=gene-PN289_08695;Name=PN289_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08695 JAQMMZ010000025.1 Protein Homology CDS 18881 19348 . + 0 ID=cds-MDB8828729.1;Parent=gene-PN289_08695;Dbxref=NCBI_GP:MDB8828729.1;Name=MDB8828729.1;Ontology_term=GO:0050485;gbkey=CDS;go_function=oxidoreductase activity%2C acting on X-H and Y-H to form an X-Y bond%2C with a disulfide as acceptor|0050485||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843471.1;locus_tag=PN289_08695;product=glycine/sarcosine/betaine reductase component B subunit;protein_id=MDB8828729.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 19375 20382 . + . ID=gene-PN289_08700;Name=PN289_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08700 JAQMMZ010000025.1 Protein Homology CDS 19375 20382 . + 0 ID=cds-MDB8828730.1;Parent=gene-PN289_08700;Dbxref=NCBI_GP:MDB8828730.1;Name=MDB8828730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003422090.1;locus_tag=PN289_08700;product=proline racemase;protein_id=MDB8828730.1;transl_table=11 JAQMMZ010000025.1 Genbank gene 20521 21417 . + . ID=gene-PN289_08705;Name=PN289_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08705 JAQMMZ010000025.1 Protein Homology CDS 20521 21417 . + 0 ID=cds-MDB8828731.1;Parent=gene-PN289_08705;Dbxref=NCBI_GP:MDB8828731.1;Name=MDB8828731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843465.1;locus_tag=PN289_08705;product=sulfite exporter TauE/SafE family protein;protein_id=MDB8828731.1;transl_table=11 ##sequence-region JAQMMZ010000026.1 1 20580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000026.1 Genbank region 1 20580 . + . ID=JAQMMZ010000026.1:1..20580;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000026.1 Genbank gene 3 74 . - . ID=gene-PN289_08710;Name=PN289_08710;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_08710 JAQMMZ010000026.1 tRNAscan-SE tRNA 3 74 . - . ID=rna-PN289_08710;Parent=gene-PN289_08710;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08710;product=tRNA-Thr JAQMMZ010000026.1 tRNAscan-SE exon 3 74 . - . ID=exon-PN289_08710-1;Parent=rna-PN289_08710;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08710;product=tRNA-Thr JAQMMZ010000026.1 Genbank gene 83 158 . - . ID=gene-PN289_08715;Name=PN289_08715;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_08715 JAQMMZ010000026.1 tRNAscan-SE tRNA 83 158 . - . ID=rna-PN289_08715;Parent=gene-PN289_08715;anticodon=(pos:complement(123..125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08715;product=tRNA-Val JAQMMZ010000026.1 tRNAscan-SE exon 83 158 . - . ID=exon-PN289_08715-1;Parent=rna-PN289_08715;anticodon=(pos:complement(123..125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08715;product=tRNA-Val JAQMMZ010000026.1 Genbank gene 170 241 . - . ID=gene-PN289_08720;Name=PN289_08720;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_08720 JAQMMZ010000026.1 tRNAscan-SE tRNA 170 241 . - . ID=rna-PN289_08720;Parent=gene-PN289_08720;anticodon=(pos:complement(206..208));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08720;product=tRNA-Glu JAQMMZ010000026.1 tRNAscan-SE exon 170 241 . - . ID=exon-PN289_08720-1;Parent=rna-PN289_08720;anticodon=(pos:complement(206..208));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08720;product=tRNA-Glu JAQMMZ010000026.1 Genbank gene 255 326 . - . ID=gene-PN289_08725;Name=PN289_08725;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_08725 JAQMMZ010000026.1 tRNAscan-SE tRNA 255 326 . - . ID=rna-PN289_08725;Parent=gene-PN289_08725;anticodon=(pos:complement(292..294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08725;product=tRNA-Asn JAQMMZ010000026.1 tRNAscan-SE exon 255 326 . - . ID=exon-PN289_08725-1;Parent=rna-PN289_08725;anticodon=(pos:complement(292..294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_08725;product=tRNA-Asn JAQMMZ010000026.1 Genbank gene 330 446 . - . ID=gene-PN289_08730;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PN289_08730 JAQMMZ010000026.1 cmsearch rRNA 330 446 . - . ID=rna-PN289_08730;Parent=gene-PN289_08730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_08730;product=5S ribosomal RNA JAQMMZ010000026.1 cmsearch exon 330 446 . - . ID=exon-PN289_08730-1;Parent=rna-PN289_08730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_08730;product=5S ribosomal RNA JAQMMZ010000026.1 Genbank gene 1054 3045 . - . ID=gene-PN289_08735;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PN289_08735 JAQMMZ010000026.1 Protein Homology CDS 1054 3045 . - 0 ID=cds-MDB8828732.1;Parent=gene-PN289_08735;Dbxref=NCBI_GP:MDB8828732.1;Name=MDB8828732.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846304.1;locus_tag=PN289_08735;product=transketolase;protein_id=MDB8828732.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 3216 4565 . - . ID=gene-PN289_08740;Name=PN289_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08740 JAQMMZ010000026.1 Protein Homology CDS 3216 4565 . - 0 ID=cds-MDB8828733.1;Parent=gene-PN289_08740;Dbxref=NCBI_GP:MDB8828733.1;Name=MDB8828733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843153.1;locus_tag=PN289_08740;product=MATE family efflux transporter;protein_id=MDB8828733.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 4800 5849 . - . ID=gene-PN289_08745;Name=PN289_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08745 JAQMMZ010000026.1 Protein Homology CDS 4800 5849 . - 0 ID=cds-MDB8828734.1;Parent=gene-PN289_08745;Dbxref=NCBI_GP:MDB8828734.1;Name=MDB8828734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843150.1;locus_tag=PN289_08745;product=peptidylprolyl isomerase;protein_id=MDB8828734.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 5867 9268 . - . ID=gene-PN289_08750;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PN289_08750 JAQMMZ010000026.1 Protein Homology CDS 5867 9268 . - 0 ID=cds-MDB8828735.1;Parent=gene-PN289_08750;Dbxref=NCBI_GP:MDB8828735.1;Name=MDB8828735.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843162.1;locus_tag=PN289_08750;product=transcription-repair coupling factor;protein_id=MDB8828735.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 9286 9846 . - . ID=gene-PN289_08755;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PN289_08755 JAQMMZ010000026.1 Protein Homology CDS 9286 9846 . - 0 ID=cds-MDB8828736.1;Parent=gene-PN289_08755;Dbxref=NCBI_GP:MDB8828736.1;Name=MDB8828736.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421426.1;locus_tag=PN289_08755;product=aminoacyl-tRNA hydrolase;protein_id=MDB8828736.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 10205 11053 . - . ID=gene-PN289_08760;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=PN289_08760 JAQMMZ010000026.1 Protein Homology CDS 10205 11053 . - 0 ID=cds-MDB8828737.1;Parent=gene-PN289_08760;Dbxref=NCBI_GP:MDB8828737.1;Name=MDB8828737.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846298.1;locus_tag=PN289_08760;product=pantoate--beta-alanine ligase;protein_id=MDB8828737.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 11151 11975 . - . ID=gene-PN289_08765;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PN289_08765 JAQMMZ010000026.1 Protein Homology CDS 11151 11975 . - 0 ID=cds-MDB8828738.1;Parent=gene-PN289_08765;Dbxref=NCBI_GP:MDB8828738.1;Name=MDB8828738.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843163.1;locus_tag=PN289_08765;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=MDB8828738.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 11994 12869 . - . ID=gene-PN289_08770;Name=PN289_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08770 JAQMMZ010000026.1 Protein Homology CDS 11994 12869 . - 0 ID=cds-MDB8828739.1;Parent=gene-PN289_08770;Dbxref=NCBI_GP:MDB8828739.1;Name=MDB8828739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846297.1;locus_tag=PN289_08770;product=DUF2520 domain-containing protein;protein_id=MDB8828739.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 13132 14430 . + . ID=gene-PN289_08775;Name=PN289_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08775 JAQMMZ010000026.1 Protein Homology CDS 13132 14430 . + 0 ID=cds-MDB8828740.1;Parent=gene-PN289_08775;Dbxref=NCBI_GP:MDB8828740.1;Name=MDB8828740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843151.1;locus_tag=PN289_08775;product=homoserine dehydrogenase;protein_id=MDB8828740.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 14432 15481 . + . ID=gene-PN289_08780;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PN289_08780 JAQMMZ010000026.1 Protein Homology CDS 14432 15481 . + 0 ID=cds-MDB8828741.1;Parent=gene-PN289_08780;Dbxref=NCBI_GP:MDB8828741.1;Name=MDB8828741.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843149.1;locus_tag=PN289_08780;product=threonine synthase;protein_id=MDB8828741.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 15492 16391 . + . ID=gene-PN289_08785;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PN289_08785 JAQMMZ010000026.1 Protein Homology CDS 15492 16391 . + 0 ID=cds-MDB8828742.1;Parent=gene-PN289_08785;Dbxref=NCBI_GP:MDB8828742.1;Name=MDB8828742.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843166.1;locus_tag=PN289_08785;product=homoserine kinase;protein_id=MDB8828742.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 16607 17293 . - . ID=gene-PN289_08790;Name=PN289_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08790 JAQMMZ010000026.1 Protein Homology CDS 16607 17293 . - 0 ID=cds-MDB8828743.1;Parent=gene-PN289_08790;Dbxref=NCBI_GP:MDB8828743.1;Name=MDB8828743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843159.1;locus_tag=PN289_08790;product=DUF554 domain-containing protein;protein_id=MDB8828743.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 17403 18947 . - . ID=gene-PN289_08795;Name=PN289_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08795 JAQMMZ010000026.1 Protein Homology CDS 17403 18947 . - 0 ID=cds-MDB8828744.1;Parent=gene-PN289_08795;Dbxref=NCBI_GP:MDB8828744.1;Name=MDB8828744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843165.1;locus_tag=PN289_08795;product=propionate CoA-transferase;protein_id=MDB8828744.1;transl_table=11 JAQMMZ010000026.1 Genbank gene 19427 20419 . + . ID=gene-PN289_08800;Name=PN289_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08800 JAQMMZ010000026.1 Protein Homology CDS 19427 20419 . + 0 ID=cds-MDB8828745.1;Parent=gene-PN289_08800;Dbxref=NCBI_GP:MDB8828745.1;Name=MDB8828745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843161.1;locus_tag=PN289_08800;product=LysR family transcriptional regulator;protein_id=MDB8828745.1;transl_table=11 ##sequence-region JAQMMZ010000027.1 1 20171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000027.1 Genbank region 1 20171 . + . ID=JAQMMZ010000027.1:1..20171;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000027.1 Genbank gene 171 1223 . + . ID=gene-PN289_08805;Name=PN289_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08805 JAQMMZ010000027.1 Protein Homology CDS 171 1223 . + 0 ID=cds-MDB8828746.1;Parent=gene-PN289_08805;Dbxref=NCBI_GP:MDB8828746.1;Name=MDB8828746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843279.1;locus_tag=PN289_08805;product=hypothetical protein;protein_id=MDB8828746.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 1225 2358 . + . ID=gene-PN289_08810;Name=PN289_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08810 JAQMMZ010000027.1 Protein Homology CDS 1225 2358 . + 0 ID=cds-MDB8828747.1;Parent=gene-PN289_08810;Dbxref=NCBI_GP:MDB8828747.1;Name=MDB8828747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843217.1;locus_tag=PN289_08810;product=tetratricopeptide repeat protein;protein_id=MDB8828747.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 2340 3665 . + . ID=gene-PN289_08815;Name=PN289_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08815 JAQMMZ010000027.1 Protein Homology CDS 2340 3665 . + 0 ID=cds-MDB8828748.1;Parent=gene-PN289_08815;Dbxref=NCBI_GP:MDB8828748.1;Name=MDB8828748.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845433.1;locus_tag=PN289_08815;product=cytochrome c biogenesis protein CcdA;protein_id=MDB8828748.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 3912 4496 . + . ID=gene-PN289_08820;Name=PN289_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08820 JAQMMZ010000027.1 Protein Homology CDS 3912 4496 . + 0 ID=cds-MDB8828749.1;Parent=gene-PN289_08820;Dbxref=NCBI_GP:MDB8828749.1;Name=MDB8828749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843200.1;locus_tag=PN289_08820;product=DUF3793 family protein;protein_id=MDB8828749.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 4512 4940 . + . ID=gene-PN289_08825;Name=PN289_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08825 JAQMMZ010000027.1 Protein Homology CDS 4512 4940 . + 0 ID=cds-MDB8828750.1;Parent=gene-PN289_08825;Dbxref=NCBI_GP:MDB8828750.1;Name=MDB8828750.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843287.1;locus_tag=PN289_08825;product=flavodoxin;protein_id=MDB8828750.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 5047 5259 . - . ID=gene-PN289_08830;Name=PN289_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08830 JAQMMZ010000027.1 Protein Homology CDS 5047 5259 . - 0 ID=cds-MDB8828751.1;Parent=gene-PN289_08830;Dbxref=NCBI_GP:MDB8828751.1;Name=MDB8828751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843201.1;locus_tag=PN289_08830;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828751.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 5303 6283 . - . ID=gene-PN289_08835;Name=PN289_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08835 JAQMMZ010000027.1 Protein Homology CDS 5303 6283 . - 0 ID=cds-MDB8828752.1;Parent=gene-PN289_08835;Dbxref=NCBI_GP:MDB8828752.1;Name=MDB8828752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843236.1;locus_tag=PN289_08835;product=hypothetical protein;protein_id=MDB8828752.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 6813 8489 . + . ID=gene-PN289_08840;Name=PN289_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08840 JAQMMZ010000027.1 Protein Homology CDS 6813 8489 . + 0 ID=cds-MDB8828753.1;Parent=gene-PN289_08840;Dbxref=NCBI_GP:MDB8828753.1;Name=MDB8828753.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989009.1;locus_tag=PN289_08840;product=formate--tetrahydrofolate ligase;protein_id=MDB8828753.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 8796 9419 . + . ID=gene-PN289_08845;Name=PN289_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08845 JAQMMZ010000027.1 Protein Homology CDS 8796 9419 . + 0 ID=cds-MDB8828754.1;Parent=gene-PN289_08845;Dbxref=NCBI_GP:MDB8828754.1;Name=MDB8828754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843173.1;locus_tag=PN289_08845;product=cyclodeaminase/cyclohydrolase family protein;protein_id=MDB8828754.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 9436 10353 . + . ID=gene-PN289_08850;Name=PN289_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08850 JAQMMZ010000027.1 Protein Homology CDS 9436 10353 . + 0 ID=cds-MDB8828755.1;Parent=gene-PN289_08850;Dbxref=NCBI_GP:MDB8828755.1;Name=MDB8828755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845424.1;locus_tag=PN289_08850;product=bifunctional 5%2C10-methylenetetrahydrofolate dehydrogenase/5%2C10-methenyltetrahydrofolate cyclohydrolase;protein_id=MDB8828755.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 10379 11944 . + . ID=gene-PN289_08855;Name=PN289_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08855 JAQMMZ010000027.1 Protein Homology CDS 10379 11944 . + 0 ID=cds-MDB8828756.1;Parent=gene-PN289_08855;Dbxref=NCBI_GP:MDB8828756.1;Name=MDB8828756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595242.1;locus_tag=PN289_08855;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=MDB8828756.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 11983 13860 . + . ID=gene-PN289_08860;Name=PN289_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08860 JAQMMZ010000027.1 Protein Homology CDS 11983 13860 . + 0 ID=cds-MDB8828757.1;Parent=gene-PN289_08860;Dbxref=NCBI_GP:MDB8828757.1;Name=MDB8828757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845422.1;locus_tag=PN289_08860;product=ATP-dependent helicase;protein_id=MDB8828757.1;transl_table=11 JAQMMZ010000027.1 cmsearch binding_site 13961 14163 . + . ID=id-JAQMMZ010000027.1:13961..14163;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000027.1 Genbank gene 14322 15167 . + . ID=gene-PN289_08865;Name=PN289_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08865 JAQMMZ010000027.1 Protein Homology CDS 14322 15167 . + 0 ID=cds-MDB8828758.1;Parent=gene-PN289_08865;Dbxref=NCBI_GP:MDB8828758.1;Name=MDB8828758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843187.1;locus_tag=PN289_08865;product=transporter substrate-binding domain-containing protein;protein_id=MDB8828758.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 15209 15874 . + . ID=gene-PN289_08870;Name=PN289_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08870 JAQMMZ010000027.1 Protein Homology CDS 15209 15874 . + 0 ID=cds-MDB8828759.1;Parent=gene-PN289_08870;Dbxref=NCBI_GP:MDB8828759.1;Name=MDB8828759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843292.1;locus_tag=PN289_08870;product=amino acid ABC transporter permease;protein_id=MDB8828759.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 15883 16623 . + . ID=gene-PN289_08875;Name=PN289_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08875 JAQMMZ010000027.1 Protein Homology CDS 15883 16623 . + 0 ID=cds-MDB8828760.1;Parent=gene-PN289_08875;Dbxref=NCBI_GP:MDB8828760.1;Name=MDB8828760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845420.1;locus_tag=PN289_08875;product=amino acid ABC transporter ATP-binding protein;protein_id=MDB8828760.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 16800 18362 . - . ID=gene-PN289_08880;Name=PN289_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08880 JAQMMZ010000027.1 Protein Homology CDS 16800 18362 . - 0 ID=cds-MDB8828761.1;Parent=gene-PN289_08880;Dbxref=NCBI_GP:MDB8828761.1;Name=MDB8828761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843302.1;locus_tag=PN289_08880;product=PH domain-containing protein;protein_id=MDB8828761.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 18363 18869 . - . ID=gene-PN289_08885;Name=PN289_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08885 JAQMMZ010000027.1 Protein Homology CDS 18363 18869 . - 0 ID=cds-MDB8828762.1;Parent=gene-PN289_08885;Dbxref=NCBI_GP:MDB8828762.1;Name=MDB8828762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843205.1;locus_tag=PN289_08885;product=PH domain-containing protein;protein_id=MDB8828762.1;transl_table=11 JAQMMZ010000027.1 Genbank gene 18983 19936 . - . ID=gene-PN289_08890;Name=PN289_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08890 JAQMMZ010000027.1 Protein Homology CDS 18983 19936 . - 0 ID=cds-MDB8828763.1;Parent=gene-PN289_08890;Dbxref=NCBI_GP:MDB8828763.1;Name=MDB8828763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845417.1;locus_tag=PN289_08890;product=AEC family transporter;protein_id=MDB8828763.1;transl_table=11 ##sequence-region JAQMMZ010000028.1 1 18728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000028.1 Genbank region 1 18728 . + . ID=JAQMMZ010000028.1:1..18728;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000028.1 Genbank pseudogene 156 1163 . - . ID=gene-PN289_08895;Name=PN289_08895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08895;pseudo=true JAQMMZ010000028.1 Protein Homology CDS 156 1163 . - 0 ID=cds-PN289_08895;Parent=gene-PN289_08895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797010.1;locus_tag=PN289_08895;product=ORF6N domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000028.1 Genbank gene 1235 1558 . - . ID=gene-PN289_08900;Name=PN289_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08900 JAQMMZ010000028.1 Protein Homology CDS 1235 1558 . - 0 ID=cds-MDB8828764.1;Parent=gene-PN289_08900;Dbxref=NCBI_GP:MDB8828764.1;Name=MDB8828764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222548.1;locus_tag=PN289_08900;product=hypothetical protein;protein_id=MDB8828764.1;transl_table=11 JAQMMZ010000028.1 Genbank pseudogene 1731 2337 . - . ID=gene-PN289_08905;Name=PN289_08905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08905;pseudo=true JAQMMZ010000028.1 Protein Homology CDS 1731 2337 . - 0 ID=cds-PN289_08905;Parent=gene-PN289_08905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004825155.1;locus_tag=PN289_08905;product=phage replisome organizer N-terminal domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000028.1 Genbank pseudogene 2340 3992 . - . ID=gene-PN289_08910;Name=PN289_08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08910;pseudo=true JAQMMZ010000028.1 Protein Homology CDS 2340 3992 . - 0 ID=cds-PN289_08910;Parent=gene-PN289_08910;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595625.1;locus_tag=PN289_08910;product=MobA/MobL family protein;pseudo=true;transl_table=11 JAQMMZ010000028.1 Genbank gene 4240 4569 . - . ID=gene-PN289_08915;Name=PN289_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08915 JAQMMZ010000028.1 Protein Homology CDS 4240 4569 . - 0 ID=cds-MDB8828765.1;Parent=gene-PN289_08915;Dbxref=NCBI_GP:MDB8828765.1;Name=MDB8828765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007894626.1;locus_tag=PN289_08915;product=DUF3847 domain-containing protein;protein_id=MDB8828765.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 4653 5069 . - . ID=gene-PN289_08920;Name=PN289_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08920 JAQMMZ010000028.1 Protein Homology CDS 4653 5069 . - 0 ID=cds-MDB8828766.1;Parent=gene-PN289_08920;Dbxref=NCBI_GP:MDB8828766.1;Name=MDB8828766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074477.1;locus_tag=PN289_08920;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8828766.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 5335 5919 . - . ID=gene-PN289_08925;Name=PN289_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08925 JAQMMZ010000028.1 Protein Homology CDS 5335 5919 . - 0 ID=cds-MDB8828767.1;Parent=gene-PN289_08925;Dbxref=NCBI_GP:MDB8828767.1;Name=MDB8828767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019213739.1;locus_tag=PN289_08925;product=MptD family putative ECF transporter S component;protein_id=MDB8828767.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 5930 6634 . - . ID=gene-PN289_08930;Name=PN289_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08930 JAQMMZ010000028.1 Protein Homology CDS 5930 6634 . - 0 ID=cds-MDB8828768.1;Parent=gene-PN289_08930;Dbxref=NCBI_GP:MDB8828768.1;Name=MDB8828768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009428128.1;locus_tag=PN289_08930;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8828768.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 6636 8141 . - . ID=gene-PN289_08935;Name=PN289_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08935 JAQMMZ010000028.1 Protein Homology CDS 6636 8141 . - 0 ID=cds-MDB8828769.1;Parent=gene-PN289_08935;Dbxref=NCBI_GP:MDB8828769.1;Name=MDB8828769.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015017157.1;locus_tag=PN289_08935;product=ATP-binding cassette domain-containing protein;protein_id=MDB8828769.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 8144 9853 . - . ID=gene-PN289_08940;Name=PN289_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08940 JAQMMZ010000028.1 Protein Homology CDS 8144 9853 . - 0 ID=cds-MDB8828770.1;Parent=gene-PN289_08940;Dbxref=NCBI_GP:MDB8828770.1;Name=MDB8828770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000488165.1;locus_tag=PN289_08940;product=ABC transporter ATP-binding protein;protein_id=MDB8828770.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 9846 11585 . - . ID=gene-PN289_08945;Name=PN289_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08945 JAQMMZ010000028.1 Protein Homology CDS 9846 11585 . - 0 ID=cds-MDB8828771.1;Parent=gene-PN289_08945;Dbxref=NCBI_GP:MDB8828771.1;Name=MDB8828771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114254.1;locus_tag=PN289_08945;product=ABC transporter ATP-binding protein;protein_id=MDB8828771.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 11726 12244 . - . ID=gene-PN289_08950;Name=PN289_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08950 JAQMMZ010000028.1 Protein Homology CDS 11726 12244 . - 0 ID=cds-MDB8828772.1;Parent=gene-PN289_08950;Dbxref=NCBI_GP:MDB8828772.1;Name=MDB8828772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013852041.1;locus_tag=PN289_08950;product=ClbS/DfsB family four-helix bundle protein;protein_id=MDB8828772.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 12295 12867 . - . ID=gene-PN289_08955;Name=PN289_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08955 JAQMMZ010000028.1 Protein Homology CDS 12295 12867 . - 0 ID=cds-MDB8828773.1;Parent=gene-PN289_08955;Dbxref=NCBI_GP:MDB8828773.1;Name=MDB8828773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007392010.1;locus_tag=PN289_08955;product=TetR/AcrR family transcriptional regulator;protein_id=MDB8828773.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 12943 14781 . - . ID=gene-PN289_08960;Name=PN289_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08960 JAQMMZ010000028.1 Protein Homology CDS 12943 14781 . - 0 ID=cds-MDB8828774.1;Parent=gene-PN289_08960;Dbxref=NCBI_GP:MDB8828774.1;Name=MDB8828774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243444.1;locus_tag=PN289_08960;product=recombinase family protein;protein_id=MDB8828774.1;transl_table=11 JAQMMZ010000028.1 Genbank pseudogene 14821 15051 . - . ID=gene-PN289_08965;Name=PN289_08965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_08965;pseudo=true JAQMMZ010000028.1 Protein Homology CDS 14821 15051 . - 0 ID=cds-PN289_08965;Parent=gene-PN289_08965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017919.2;locus_tag=PN289_08965;product=hypothetical protein;pseudo=true;transl_table=11 JAQMMZ010000028.1 Genbank gene 15150 15464 . - . ID=gene-PN289_08970;Name=PN289_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08970 JAQMMZ010000028.1 Protein Homology CDS 15150 15464 . - 0 ID=cds-MDB8828775.1;Parent=gene-PN289_08970;Dbxref=NCBI_GP:MDB8828775.1;Name=MDB8828775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167155.1;locus_tag=PN289_08970;product=YjcQ family protein;protein_id=MDB8828775.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 15476 15670 . - . ID=gene-PN289_08975;Name=PN289_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08975 JAQMMZ010000028.1 Protein Homology CDS 15476 15670 . - 0 ID=cds-MDB8828776.1;Parent=gene-PN289_08975;Dbxref=NCBI_GP:MDB8828776.1;Name=MDB8828776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843520.1;locus_tag=PN289_08975;product=hypothetical protein;protein_id=MDB8828776.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 15692 16150 . - . ID=gene-PN289_08980;Name=PN289_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08980 JAQMMZ010000028.1 Protein Homology CDS 15692 16150 . - 0 ID=cds-MDB8828777.1;Parent=gene-PN289_08980;Dbxref=NCBI_GP:MDB8828777.1;Name=MDB8828777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026880.2;locus_tag=PN289_08980;product=polymorphic toxin type 50 domain-containing protein;protein_id=MDB8828777.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 16432 16746 . - . ID=gene-PN289_08985;Name=PN289_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08985 JAQMMZ010000028.1 Protein Homology CDS 16432 16746 . - 0 ID=cds-MDB8828778.1;Parent=gene-PN289_08985;Dbxref=NCBI_GP:MDB8828778.1;Name=MDB8828778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167155.1;locus_tag=PN289_08985;product=YjcQ family protein;protein_id=MDB8828778.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 16746 16961 . - . ID=gene-PN289_08990;Name=PN289_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08990 JAQMMZ010000028.1 Protein Homology CDS 16746 16961 . - 0 ID=cds-MDB8828779.1;Parent=gene-PN289_08990;Dbxref=NCBI_GP:MDB8828779.1;Name=MDB8828779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167253.1;locus_tag=PN289_08990;product=CPCC family cysteine-rich protein;protein_id=MDB8828779.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 16948 17112 . - . ID=gene-PN289_08995;Name=PN289_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_08995 JAQMMZ010000028.1 Protein Homology CDS 16948 17112 . - 0 ID=cds-MDB8828780.1;Parent=gene-PN289_08995;Dbxref=NCBI_GP:MDB8828780.1;Name=MDB8828780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846341.1;locus_tag=PN289_08995;product=hypothetical protein;protein_id=MDB8828780.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 17269 17400 . - . ID=gene-PN289_09000;Name=PN289_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09000 JAQMMZ010000028.1 Protein Homology CDS 17269 17400 . - 0 ID=cds-MDB8828781.1;Parent=gene-PN289_09000;Dbxref=NCBI_GP:MDB8828781.1;Name=MDB8828781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846342.1;locus_tag=PN289_09000;product=hypothetical protein;protein_id=MDB8828781.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 17531 17890 . - . ID=gene-PN289_09005;Name=PN289_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09005 JAQMMZ010000028.1 Protein Homology CDS 17531 17890 . - 0 ID=cds-MDB8828782.1;Parent=gene-PN289_09005;Dbxref=NCBI_GP:MDB8828782.1;Name=MDB8828782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595664.1;locus_tag=PN289_09005;product=hypothetical protein;protein_id=MDB8828782.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 18087 18377 . - . ID=gene-PN289_09010;Name=PN289_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09010 JAQMMZ010000028.1 GeneMarkS-2+ CDS 18087 18377 . - 0 ID=cds-MDB8828783.1;Parent=gene-PN289_09010;Dbxref=NCBI_GP:MDB8828783.1;Name=MDB8828783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_09010;product=hypothetical protein;protein_id=MDB8828783.1;transl_table=11 JAQMMZ010000028.1 Genbank gene 18347 18526 . - . ID=gene-PN289_09015;Name=PN289_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09015 JAQMMZ010000028.1 Protein Homology CDS 18347 18526 . - 0 ID=cds-MDB8828784.1;Parent=gene-PN289_09015;Dbxref=NCBI_GP:MDB8828784.1;Name=MDB8828784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.2;locus_tag=PN289_09015;product=ParB N-terminal domain-containing protein;protein_id=MDB8828784.1;transl_table=11 ##sequence-region JAQMMZ010000029.1 1 15907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000029.1 Genbank region 1 15907 . + . ID=JAQMMZ010000029.1:1..15907;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000029.1 Genbank gene 115 411 . - . ID=gene-PN289_09020;Name=PN289_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09020 JAQMMZ010000029.1 GeneMarkS-2+ CDS 115 411 . - 0 ID=cds-MDB8828785.1;Parent=gene-PN289_09020;Dbxref=NCBI_GP:MDB8828785.1;Name=MDB8828785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_09020;product=hypothetical protein;protein_id=MDB8828785.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 558 752 . - . ID=gene-PN289_09025;Name=PN289_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09025 JAQMMZ010000029.1 Protein Homology CDS 558 752 . - 0 ID=cds-MDB8828786.1;Parent=gene-PN289_09025;Dbxref=NCBI_GP:MDB8828786.1;Name=MDB8828786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021533.2;locus_tag=PN289_09025;product=DUF2263 domain-containing protein;protein_id=MDB8828786.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 814 2166 . - . ID=gene-PN289_09030;Name=PN289_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09030 JAQMMZ010000029.1 Protein Homology CDS 814 2166 . - 0 ID=cds-MDB8828787.1;Parent=gene-PN289_09030;Dbxref=NCBI_GP:MDB8828787.1;Name=MDB8828787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846714.1;locus_tag=PN289_09030;product=hypothetical protein;protein_id=MDB8828787.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 2311 2694 . - . ID=gene-PN289_09035;Name=PN289_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09035 JAQMMZ010000029.1 Protein Homology CDS 2311 2694 . - 0 ID=cds-MDB8828788.1;Parent=gene-PN289_09035;Dbxref=NCBI_GP:MDB8828788.1;Name=MDB8828788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846713.1;locus_tag=PN289_09035;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=MDB8828788.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 2839 5895 . - . ID=gene-PN289_09040;Name=PN289_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09040 JAQMMZ010000029.1 Protein Homology CDS 2839 5895 . - 0 ID=cds-MDB8828789.1;Parent=gene-PN289_09040;Dbxref=NCBI_GP:MDB8828789.1;Name=MDB8828789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009244805.1;locus_tag=PN289_09040;product=DEAD/DEAH box helicase;protein_id=MDB8828789.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 6137 7456 . - . ID=gene-PN289_09045;Name=PN289_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09045 JAQMMZ010000029.1 Protein Homology CDS 6137 7456 . - 0 ID=cds-MDB8828790.1;Parent=gene-PN289_09045;Dbxref=NCBI_GP:MDB8828790.1;Name=MDB8828790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008392738.1;locus_tag=PN289_09045;product=HAMP domain-containing sensor histidine kinase;protein_id=MDB8828790.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 7453 8106 . - . ID=gene-PN289_09050;Name=PN289_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09050 JAQMMZ010000029.1 Protein Homology CDS 7453 8106 . - 0 ID=cds-MDB8828791.1;Parent=gene-PN289_09050;Dbxref=NCBI_GP:MDB8828791.1;Name=MDB8828791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334003.1;locus_tag=PN289_09050;product=response regulator transcription factor;protein_id=MDB8828791.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 8212 9588 . - . ID=gene-PN289_09055;Name=PN289_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09055 JAQMMZ010000029.1 Protein Homology CDS 8212 9588 . - 0 ID=cds-MDB8828792.1;Parent=gene-PN289_09055;Dbxref=NCBI_GP:MDB8828792.1;Name=MDB8828792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647836.1;locus_tag=PN289_09055;product=ABC transporter permease;protein_id=MDB8828792.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 9588 10244 . - . ID=gene-PN289_09060;Name=PN289_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09060 JAQMMZ010000029.1 Protein Homology CDS 9588 10244 . - 0 ID=cds-MDB8828793.1;Parent=gene-PN289_09060;Dbxref=NCBI_GP:MDB8828793.1;Name=MDB8828793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004612033.1;locus_tag=PN289_09060;product=ABC transporter ATP-binding protein;protein_id=MDB8828793.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 10254 11531 . - . ID=gene-PN289_09065;Name=PN289_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09065 JAQMMZ010000029.1 Protein Homology CDS 10254 11531 . - 0 ID=cds-MDB8828794.1;Parent=gene-PN289_09065;Dbxref=NCBI_GP:MDB8828794.1;Name=MDB8828794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898531.1;locus_tag=PN289_09065;product=ABC transporter permease;protein_id=MDB8828794.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 11550 12440 . - . ID=gene-PN289_09070;Name=PN289_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09070 JAQMMZ010000029.1 Protein Homology CDS 11550 12440 . - 0 ID=cds-MDB8828795.1;Parent=gene-PN289_09070;Dbxref=NCBI_GP:MDB8828795.1;Name=MDB8828795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008392734.1;locus_tag=PN289_09070;product=4Fe-4S binding protein;protein_id=MDB8828795.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 12433 12585 . - . ID=gene-PN289_09075;Name=PN289_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09075 JAQMMZ010000029.1 Protein Homology CDS 12433 12585 . - 0 ID=cds-MDB8828796.1;Parent=gene-PN289_09075;Dbxref=NCBI_GP:MDB8828796.1;Name=MDB8828796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003426158.1;locus_tag=PN289_09075;product=CD1871A family CXXC motif-containing protein;protein_id=MDB8828796.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 12607 13764 . - . ID=gene-PN289_09080;Name=PN289_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09080 JAQMMZ010000029.1 Protein Homology CDS 12607 13764 . - 0 ID=cds-MDB8828797.1;Parent=gene-PN289_09080;Dbxref=NCBI_GP:MDB8828797.1;Name=MDB8828797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893966.1;locus_tag=PN289_09080;product=TlpA disulfide reductase family protein;protein_id=MDB8828797.1;transl_table=11 JAQMMZ010000029.1 Genbank pseudogene 14122 14247 . + . ID=gene-PN289_09085;Name=PN289_09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_09085;pseudo=true JAQMMZ010000029.1 Protein Homology CDS 14122 14247 . + 0 ID=cds-PN289_09085;Parent=gene-PN289_09085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018671.1;locus_tag=PN289_09085;product=relaxase;pseudo=true;transl_table=11 JAQMMZ010000029.1 Genbank gene 14253 14759 . - . ID=gene-PN289_09090;Name=PN289_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09090 JAQMMZ010000029.1 Protein Homology CDS 14253 14759 . - 0 ID=cds-MDB8828798.1;Parent=gene-PN289_09090;Dbxref=NCBI_GP:MDB8828798.1;Name=MDB8828798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005956879.1;locus_tag=PN289_09090;product=hypothetical protein;protein_id=MDB8828798.1;transl_table=11 JAQMMZ010000029.1 Genbank gene 14817 15434 . - . ID=gene-PN289_09095;Name=PN289_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09095 JAQMMZ010000029.1 Protein Homology CDS 14817 15434 . - 0 ID=cds-MDB8828799.1;Parent=gene-PN289_09095;Dbxref=NCBI_GP:MDB8828799.1;Name=MDB8828799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886378.1;locus_tag=PN289_09095;product=class I SAM-dependent methyltransferase;protein_id=MDB8828799.1;transl_table=11 ##sequence-region JAQMMZ010000002.1 1 201080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000002.1 Genbank region 1 201080 . + . ID=JAQMMZ010000002.1:1..201080;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000002.1 Genbank gene 721 852 . + . ID=gene-PN289_01405;Name=PN289_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01405 JAQMMZ010000002.1 GeneMarkS-2+ CDS 721 852 . + 0 ID=cds-MDB8827299.1;Parent=gene-PN289_01405;Dbxref=NCBI_GP:MDB8827299.1;Name=MDB8827299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_01405;product=hypothetical protein;protein_id=MDB8827299.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 865 4917 . + . ID=gene-PN289_01410;Name=PN289_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01410 JAQMMZ010000002.1 Protein Homology CDS 865 4917 . + 0 ID=cds-MDB8827300.1;Parent=gene-PN289_01410;Dbxref=NCBI_GP:MDB8827300.1;Name=MDB8827300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016121.2;locus_tag=PN289_01410;product=cell wall-binding repeat-containing protein;protein_id=MDB8827300.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 5165 5896 . + . ID=gene-PN289_01415;Name=PN289_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01415 JAQMMZ010000002.1 Protein Homology CDS 5165 5896 . + 0 ID=cds-MDB8827301.1;Parent=gene-PN289_01415;Dbxref=NCBI_GP:MDB8827301.1;Name=MDB8827301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844256.1;locus_tag=PN289_01415;product=ferric reductase-like transmembrane domain-containing protein;protein_id=MDB8827301.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 5974 6498 . + . ID=gene-PN289_01420;Name=PN289_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01420 JAQMMZ010000002.1 Protein Homology CDS 5974 6498 . + 0 ID=cds-MDB8827302.1;Parent=gene-PN289_01420;Dbxref=NCBI_GP:MDB8827302.1;Name=MDB8827302.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790061.1;locus_tag=PN289_01420;product=FMN-binding protein;protein_id=MDB8827302.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 6498 7376 . + . ID=gene-PN289_01425;Name=PN289_01425;end_range=7376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01425;partial=true JAQMMZ010000002.1 Protein Homology CDS 6498 7376 . + 0 ID=cds-MDB8827303.1;Parent=gene-PN289_01425;Dbxref=NCBI_GP:MDB8827303.1;Name=MDB8827303.1;Ontology_term=GO:0010181,GO:0016020;end_range=7376,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844264.1;locus_tag=PN289_01425;partial=true;product=FMN-binding protein;protein_id=MDB8827303.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 7475 8674 . + . ID=gene-PN289_01430;Name=PN289_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01430;partial=true;start_range=.,7475 JAQMMZ010000002.1 Protein Homology CDS 7475 8674 . + 0 ID=cds-MDB8827304.1;Parent=gene-PN289_01430;Dbxref=NCBI_GP:MDB8827304.1;Name=MDB8827304.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844264.1;locus_tag=PN289_01430;partial=true;product=FMN-binding protein;protein_id=MDB8827304.1;start_range=.,7475;transl_table=11 JAQMMZ010000002.1 Genbank gene 8972 9370 . + . ID=gene-PN289_01435;Name=PN289_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01435 JAQMMZ010000002.1 Protein Homology CDS 8972 9370 . + 0 ID=cds-MDB8827305.1;Parent=gene-PN289_01435;Dbxref=NCBI_GP:MDB8827305.1;Name=MDB8827305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844261.1;locus_tag=PN289_01435;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=MDB8827305.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 9475 9981 . - . ID=gene-PN289_01440;Name=PN289_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01440 JAQMMZ010000002.1 Protein Homology CDS 9475 9981 . - 0 ID=cds-MDB8827306.1;Parent=gene-PN289_01440;Dbxref=NCBI_GP:MDB8827306.1;Name=MDB8827306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844255.1;locus_tag=PN289_01440;product=ferritin family protein;protein_id=MDB8827306.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 10394 11581 . + . ID=gene-PN289_01445;Name=PN289_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01445 JAQMMZ010000002.1 Protein Homology CDS 10394 11581 . + 0 ID=cds-MDB8827307.1;Parent=gene-PN289_01445;Dbxref=NCBI_GP:MDB8827307.1;Name=MDB8827307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844258.1;locus_tag=PN289_01445;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=MDB8827307.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 11590 13314 . + . ID=gene-PN289_01450;Name=PN289_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01450 JAQMMZ010000002.1 Protein Homology CDS 11590 13314 . + 0 ID=cds-MDB8827308.1;Parent=gene-PN289_01450;Dbxref=NCBI_GP:MDB8827308.1;Name=MDB8827308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844265.1;locus_tag=PN289_01450;product=ABC transporter permease subunit;protein_id=MDB8827308.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 13341 13976 . + . ID=gene-PN289_01455;Name=PN289_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01455 JAQMMZ010000002.1 Protein Homology CDS 13341 13976 . + 0 ID=cds-MDB8827309.1;Parent=gene-PN289_01455;Dbxref=NCBI_GP:MDB8827309.1;Name=MDB8827309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846716.1;locus_tag=PN289_01455;product=ABC transporter permease;protein_id=MDB8827309.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 14279 15754 . + . ID=gene-PN289_01460;Name=PN289_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01460 JAQMMZ010000002.1 Protein Homology CDS 14279 15754 . + 0 ID=cds-MDB8827310.1;Parent=gene-PN289_01460;Dbxref=NCBI_GP:MDB8827310.1;Name=MDB8827310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844253.1;locus_tag=PN289_01460;product=aldehyde dehydrogenase family protein;protein_id=MDB8827310.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 16043 17425 . + . ID=gene-PN289_01465;Name=PN289_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01465 JAQMMZ010000002.1 Protein Homology CDS 16043 17425 . + 0 ID=cds-MDB8827311.1;Parent=gene-PN289_01465;Dbxref=NCBI_GP:MDB8827311.1;Name=MDB8827311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846719.1;locus_tag=PN289_01465;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MDB8827311.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 17542 18732 . + . ID=gene-PN289_01470;Name=PN289_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01470 JAQMMZ010000002.1 Protein Homology CDS 17542 18732 . + 0 ID=cds-MDB8827312.1;Parent=gene-PN289_01470;Dbxref=NCBI_GP:MDB8827312.1;Name=MDB8827312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790100.1;locus_tag=PN289_01470;product=coenzyme F420-0:L-glutamate ligase;protein_id=MDB8827312.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 18816 19916 . + . ID=gene-PN289_01475;Name=PN289_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01475 JAQMMZ010000002.1 Protein Homology CDS 18816 19916 . + 0 ID=cds-MDB8827313.1;Parent=gene-PN289_01475;Dbxref=NCBI_GP:MDB8827313.1;Name=MDB8827313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844251.1;locus_tag=PN289_01475;product=glycerol dehydrogenase;protein_id=MDB8827313.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 19939 20115 . + . ID=gene-PN289_01480;Name=PN289_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01480 JAQMMZ010000002.1 Protein Homology CDS 19939 20115 . + 0 ID=cds-MDB8827314.1;Parent=gene-PN289_01480;Dbxref=NCBI_GP:MDB8827314.1;Name=MDB8827314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844260.1;locus_tag=PN289_01480;product=rubredoxin;protein_id=MDB8827314.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 20223 20954 . - . ID=gene-PN289_01485;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PN289_01485 JAQMMZ010000002.1 Protein Homology CDS 20223 20954 . - 0 ID=cds-MDB8827315.1;Parent=gene-PN289_01485;Dbxref=NCBI_GP:MDB8827315.1;Name=MDB8827315.1;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842558.1;locus_tag=PN289_01485;product=glucosamine-6-phosphate deaminase;protein_id=MDB8827315.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 21342 22040 . + . ID=gene-PN289_01490;Name=PN289_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01490 JAQMMZ010000002.1 Protein Homology CDS 21342 22040 . + 0 ID=cds-MDB8827316.1;Parent=gene-PN289_01490;Dbxref=NCBI_GP:MDB8827316.1;Name=MDB8827316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842525.1;locus_tag=PN289_01490;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MDB8827316.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 22148 23068 . + . ID=gene-PN289_01495;Name=PN289_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01495 JAQMMZ010000002.1 Protein Homology CDS 22148 23068 . + 0 ID=cds-MDB8827317.1;Parent=gene-PN289_01495;Dbxref=NCBI_GP:MDB8827317.1;Name=MDB8827317.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842580.1;locus_tag=PN289_01495;product=dihydrodipicolinate synthase family protein;protein_id=MDB8827317.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 23082 24593 . + . ID=gene-PN289_01500;Name=PN289_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01500 JAQMMZ010000002.1 Protein Homology CDS 23082 24593 . + 0 ID=cds-MDB8827318.1;Parent=gene-PN289_01500;Dbxref=NCBI_GP:MDB8827318.1;Name=MDB8827318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842556.1;locus_tag=PN289_01500;product=sodium:solute symporter;protein_id=MDB8827318.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 24607 25056 . + . ID=gene-PN289_01505;Name=PN289_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01505 JAQMMZ010000002.1 Protein Homology CDS 24607 25056 . + 0 ID=cds-MDB8827319.1;Parent=gene-PN289_01505;Dbxref=NCBI_GP:MDB8827319.1;Name=MDB8827319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846722.1;locus_tag=PN289_01505;product=YhcH/YjgK/YiaL family protein;protein_id=MDB8827319.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 25173 26084 . + . ID=gene-PN289_01510;Name=PN289_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01510 JAQMMZ010000002.1 Protein Homology CDS 25173 26084 . + 0 ID=cds-MDB8827320.1;Parent=gene-PN289_01510;Dbxref=NCBI_GP:MDB8827320.1;Name=MDB8827320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842520.1;locus_tag=PN289_01510;product=ROK family protein;protein_id=MDB8827320.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 26095 26919 . + . ID=gene-PN289_01515;Name=PN289_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01515 JAQMMZ010000002.1 Protein Homology CDS 26095 26919 . + 0 ID=cds-MDB8827321.1;Parent=gene-PN289_01515;Dbxref=NCBI_GP:MDB8827321.1;Name=MDB8827321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842532.1;locus_tag=PN289_01515;product=MurR/RpiR family transcriptional regulator;protein_id=MDB8827321.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 26997 28145 . + . ID=gene-PN289_01520;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PN289_01520 JAQMMZ010000002.1 Protein Homology CDS 26997 28145 . + 0 ID=cds-MDB8827322.1;Parent=gene-PN289_01520;Dbxref=NCBI_GP:MDB8827322.1;Name=MDB8827322.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846725.1;locus_tag=PN289_01520;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=MDB8827322.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 28371 29141 . - . ID=gene-PN289_01525;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PN289_01525 JAQMMZ010000002.1 Protein Homology CDS 28371 29141 . - 0 ID=cds-MDB8827323.1;Parent=gene-PN289_01525;Dbxref=NCBI_GP:MDB8827323.1;Name=MDB8827323.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846726.1;locus_tag=PN289_01525;product=peroxide stress protein YaaA;protein_id=MDB8827323.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 29584 30060 . + . ID=gene-PN289_01530;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PN289_01530 JAQMMZ010000002.1 Protein Homology CDS 29584 30060 . + 0 ID=cds-MDB8827324.1;Parent=gene-PN289_01530;Dbxref=NCBI_GP:MDB8827324.1;Name=MDB8827324.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846727.1;locus_tag=PN289_01530;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MDB8827324.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 30172 31248 . + . ID=gene-PN289_01535;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PN289_01535 JAQMMZ010000002.1 Protein Homology CDS 30172 31248 . + 0 ID=cds-MDB8827325.1;Parent=gene-PN289_01535;Dbxref=NCBI_GP:MDB8827325.1;Name=MDB8827325.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842489.1;locus_tag=PN289_01535;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=MDB8827325.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 31275 31868 . + . ID=gene-PN289_01540;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PN289_01540 JAQMMZ010000002.1 Protein Homology CDS 31275 31868 . + 0 ID=cds-MDB8827326.1;Parent=gene-PN289_01540;Dbxref=NCBI_GP:MDB8827326.1;Name=MDB8827326.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842557.1;locus_tag=PN289_01540;product=phosphoribosylglycinamide formyltransferase;protein_id=MDB8827326.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 31884 33413 . + . ID=gene-PN289_01545;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PN289_01545 JAQMMZ010000002.1 Protein Homology CDS 31884 33413 . + 0 ID=cds-MDB8827327.1;Parent=gene-PN289_01545;Dbxref=NCBI_GP:MDB8827327.1;Name=MDB8827327.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846731.1;locus_tag=PN289_01545;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=MDB8827327.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 33482 34750 . + . ID=gene-PN289_01550;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PN289_01550 JAQMMZ010000002.1 Protein Homology CDS 33482 34750 . + 0 ID=cds-MDB8827328.1;Parent=gene-PN289_01550;Dbxref=NCBI_GP:MDB8827328.1;Name=MDB8827328.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842528.1;locus_tag=PN289_01550;product=phosphoribosylamine--glycine ligase;protein_id=MDB8827328.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 34734 38516 . + . ID=gene-PN289_01555;Name=PN289_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01555 JAQMMZ010000002.1 Protein Homology CDS 34734 38516 . + 0 ID=cds-MDB8827329.1;Parent=gene-PN289_01555;Dbxref=NCBI_GP:MDB8827329.1;Name=MDB8827329.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842565.1;locus_tag=PN289_01555;product=phosphoribosylformylglycinamidine synthase;protein_id=MDB8827329.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 38772 39056 . + . ID=gene-PN289_01560;Name=PN289_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01560 JAQMMZ010000002.1 Protein Homology CDS 38772 39056 . + 0 ID=cds-MDB8827330.1;Parent=gene-PN289_01560;Dbxref=NCBI_GP:MDB8827330.1;Name=MDB8827330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842538.1;locus_tag=PN289_01560;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MDB8827330.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 39093 40823 . + . ID=gene-PN289_01565;Name=PN289_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01565 JAQMMZ010000002.1 Protein Homology CDS 39093 40823 . + 0 ID=cds-MDB8827331.1;Parent=gene-PN289_01565;Dbxref=NCBI_GP:MDB8827331.1;Name=MDB8827331.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842505.1;locus_tag=PN289_01565;product=CoA-disulfide reductase;protein_id=MDB8827331.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 41052 41420 . + . ID=gene-PN289_01570;Name=PN289_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01570 JAQMMZ010000002.1 Protein Homology CDS 41052 41420 . + 0 ID=cds-MDB8827332.1;Parent=gene-PN289_01570;Dbxref=NCBI_GP:MDB8827332.1;Name=MDB8827332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842563.1;locus_tag=PN289_01570;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=MDB8827332.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 41552 42925 . - . ID=gene-PN289_01575;Name=PN289_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01575 JAQMMZ010000002.1 Protein Homology CDS 41552 42925 . - 0 ID=cds-MDB8827333.1;Parent=gene-PN289_01575;Dbxref=NCBI_GP:MDB8827333.1;Name=MDB8827333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842567.1;locus_tag=PN289_01575;product=MATE family efflux transporter;protein_id=MDB8827333.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 42906 43391 . - . ID=gene-PN289_01580;Name=PN289_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01580 JAQMMZ010000002.1 Protein Homology CDS 42906 43391 . - 0 ID=cds-MDB8827334.1;Parent=gene-PN289_01580;Dbxref=NCBI_GP:MDB8827334.1;Name=MDB8827334.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842570.1;locus_tag=PN289_01580;product=MarR family transcriptional regulator;protein_id=MDB8827334.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 43596 44075 . + . ID=gene-PN289_01585;Name=PN289_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01585 JAQMMZ010000002.1 Protein Homology CDS 43596 44075 . + 0 ID=cds-MDB8827335.1;Parent=gene-PN289_01585;Dbxref=NCBI_GP:MDB8827335.1;Name=MDB8827335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842518.1;locus_tag=PN289_01585;product=8-oxo-dGTP diphosphatase;protein_id=MDB8827335.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 44092 45666 . + . ID=gene-PN289_01590;Name=PN289_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01590 JAQMMZ010000002.1 Protein Homology CDS 44092 45666 . + 0 ID=cds-MDB8827336.1;Parent=gene-PN289_01590;Dbxref=NCBI_GP:MDB8827336.1;Name=MDB8827336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846671.1;locus_tag=PN289_01590;product=YdiU family protein;protein_id=MDB8827336.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 45790 46323 . + . ID=gene-PN289_01595;Name=PN289_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01595 JAQMMZ010000002.1 Protein Homology CDS 45790 46323 . + 0 ID=cds-MDB8827337.1;Parent=gene-PN289_01595;Dbxref=NCBI_GP:MDB8827337.1;Name=MDB8827337.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013380575.1;locus_tag=PN289_01595;product=ribonuclease domain-containing protein;protein_id=MDB8827337.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 46323 46538 . + . ID=gene-PN289_01600;Name=PN289_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01600 JAQMMZ010000002.1 Protein Homology CDS 46323 46538 . + 0 ID=cds-MDB8827338.1;Parent=gene-PN289_01600;Dbxref=NCBI_GP:MDB8827338.1;Name=MDB8827338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842578.1;locus_tag=PN289_01600;product=barstar family protein;protein_id=MDB8827338.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 46579 46770 . + . ID=gene-PN289_01605;Name=PN289_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01605 JAQMMZ010000002.1 Protein Homology CDS 46579 46770 . + 0 ID=cds-MDB8827339.1;Parent=gene-PN289_01605;Dbxref=NCBI_GP:MDB8827339.1;Name=MDB8827339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842560.1;locus_tag=PN289_01605;product=XRE family transcriptional regulator;protein_id=MDB8827339.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 46835 47350 . - . ID=gene-PN289_01610;Name=PN289_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01610 JAQMMZ010000002.1 Protein Homology CDS 46835 47350 . - 0 ID=cds-MDB8827340.1;Parent=gene-PN289_01610;Dbxref=NCBI_GP:MDB8827340.1;Name=MDB8827340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842531.1;locus_tag=PN289_01610;product=ECF transporter S component;protein_id=MDB8827340.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 47465 47881 . - . ID=gene-PN289_01615;Name=PN289_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01615 JAQMMZ010000002.1 Protein Homology CDS 47465 47881 . - 0 ID=cds-MDB8827341.1;Parent=gene-PN289_01615;Dbxref=NCBI_GP:MDB8827341.1;Name=MDB8827341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846599.1;locus_tag=PN289_01615;product=MarR family transcriptional regulator;protein_id=MDB8827341.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 48216 48962 . + . ID=gene-PN289_01620;Name=PN289_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01620 JAQMMZ010000002.1 Protein Homology CDS 48216 48962 . + 0 ID=cds-MDB8827342.1;Parent=gene-PN289_01620;Dbxref=NCBI_GP:MDB8827342.1;Name=MDB8827342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846598.1;locus_tag=PN289_01620;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MDB8827342.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 49160 50092 . + . ID=gene-PN289_01625;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PN289_01625 JAQMMZ010000002.1 Protein Homology CDS 49160 50092 . + 0 ID=cds-MDB8827343.1;Parent=gene-PN289_01625;Dbxref=NCBI_GP:MDB8827343.1;Name=MDB8827343.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595702.1;locus_tag=PN289_01625;product=1-phosphofructokinase;protein_id=MDB8827343.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 50113 52011 . + . ID=gene-PN289_01630;Name=PN289_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01630 JAQMMZ010000002.1 Protein Homology CDS 50113 52011 . + 0 ID=cds-MDB8827344.1;Parent=gene-PN289_01630;Dbxref=NCBI_GP:MDB8827344.1;Name=MDB8827344.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846596.1;locus_tag=PN289_01630;product=fructose-specific PTS transporter subunit EIIC;protein_id=MDB8827344.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 52175 52618 . - . ID=gene-PN289_01635;Name=PN289_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01635 JAQMMZ010000002.1 Protein Homology CDS 52175 52618 . - 0 ID=cds-MDB8827345.1;Parent=gene-PN289_01635;Dbxref=NCBI_GP:MDB8827345.1;Name=MDB8827345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846595.1;locus_tag=PN289_01635;product=C-GCAxxG-C-C family protein;protein_id=MDB8827345.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 52806 53648 . + . ID=gene-PN289_01640;Name=PN289_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01640 JAQMMZ010000002.1 Protein Homology CDS 52806 53648 . + 0 ID=cds-MDB8827346.1;Parent=gene-PN289_01640;Dbxref=NCBI_GP:MDB8827346.1;Name=MDB8827346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846594.1;locus_tag=PN289_01640;product=DUF5685 family protein;protein_id=MDB8827346.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 53664 55031 . + . ID=gene-PN289_01645;Name=PN289_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01645 JAQMMZ010000002.1 Protein Homology CDS 53664 55031 . + 0 ID=cds-MDB8827347.1;Parent=gene-PN289_01645;Dbxref=NCBI_GP:MDB8827347.1;Name=MDB8827347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846593.1;locus_tag=PN289_01645;product=MATE family efflux transporter;protein_id=MDB8827347.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 55061 55735 . - . ID=gene-PN289_01650;Name=PN289_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01650 JAQMMZ010000002.1 Protein Homology CDS 55061 55735 . - 0 ID=cds-MDB8827348.1;Parent=gene-PN289_01650;Dbxref=NCBI_GP:MDB8827348.1;Name=MDB8827348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01076.1;locus_tag=PN289_01650;product=class A sortase;protein_id=MDB8827348.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 56013 57254 . + . ID=gene-PN289_01655;Name=PN289_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01655 JAQMMZ010000002.1 Protein Homology CDS 56013 57254 . + 0 ID=cds-MDB8827349.1;Parent=gene-PN289_01655;Dbxref=NCBI_GP:MDB8827349.1;Name=MDB8827349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842544.1;locus_tag=PN289_01655;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDB8827349.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 57478 58269 . + . ID=gene-PN289_01660;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PN289_01660 JAQMMZ010000002.1 Protein Homology CDS 57478 58269 . + 0 ID=cds-MDB8827350.1;Parent=gene-PN289_01660;Dbxref=NCBI_GP:MDB8827350.1;Name=MDB8827350.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845041.1;locus_tag=PN289_01660;product=Fe-S cluster assembly ATPase SufC;protein_id=MDB8827350.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 58259 59671 . + . ID=gene-PN289_01665;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PN289_01665 JAQMMZ010000002.1 Protein Homology CDS 58259 59671 . + 0 ID=cds-MDB8827351.1;Parent=gene-PN289_01665;Dbxref=NCBI_GP:MDB8827351.1;Name=MDB8827351.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595329.1;locus_tag=PN289_01665;product=Fe-S cluster assembly protein SufB;protein_id=MDB8827351.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 59683 60513 . + . ID=gene-PN289_01670;Name=PN289_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01670 JAQMMZ010000002.1 Protein Homology CDS 59683 60513 . + 0 ID=cds-MDB8827352.1;Parent=gene-PN289_01670;Dbxref=NCBI_GP:MDB8827352.1;Name=MDB8827352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842539.1;locus_tag=PN289_01670;product=SufD family Fe-S cluster assembly protein;protein_id=MDB8827352.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 60625 61860 . + . ID=gene-PN289_01675;Name=PN289_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01675 JAQMMZ010000002.1 Protein Homology CDS 60625 61860 . + 0 ID=cds-MDB8827353.1;Parent=gene-PN289_01675;Dbxref=NCBI_GP:MDB8827353.1;Name=MDB8827353.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842524.1;locus_tag=PN289_01675;product=SufS family cysteine desulfurase;protein_id=MDB8827353.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 61850 62296 . + . ID=gene-PN289_01680;Name=PN289_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01680 JAQMMZ010000002.1 Protein Homology CDS 61850 62296 . + 0 ID=cds-MDB8827354.1;Parent=gene-PN289_01680;Dbxref=NCBI_GP:MDB8827354.1;Name=MDB8827354.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845038.1;locus_tag=PN289_01680;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=MDB8827354.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 62497 63147 . + . ID=gene-PN289_01685;Name=PN289_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01685 JAQMMZ010000002.1 Protein Homology CDS 62497 63147 . + 0 ID=cds-MDB8827355.1;Parent=gene-PN289_01685;Dbxref=NCBI_GP:MDB8827355.1;Name=MDB8827355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842536.1;locus_tag=PN289_01685;product=hypothetical protein;protein_id=MDB8827355.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 63159 63707 . + . ID=gene-PN289_01690;Name=PN289_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01690 JAQMMZ010000002.1 Protein Homology CDS 63159 63707 . + 0 ID=cds-MDB8827356.1;Parent=gene-PN289_01690;Dbxref=NCBI_GP:MDB8827356.1;Name=MDB8827356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842551.1;locus_tag=PN289_01690;product=chromate transporter;protein_id=MDB8827356.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 63708 64265 . + . ID=gene-PN289_01695;Name=PN289_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01695 JAQMMZ010000002.1 Protein Homology CDS 63708 64265 . + 0 ID=cds-MDB8827357.1;Parent=gene-PN289_01695;Dbxref=NCBI_GP:MDB8827357.1;Name=MDB8827357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842508.1;locus_tag=PN289_01695;product=chromate transporter;protein_id=MDB8827357.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 64330 64887 . - . ID=gene-PN289_01700;Name=PN289_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01700 JAQMMZ010000002.1 Protein Homology CDS 64330 64887 . - 0 ID=cds-MDB8827358.1;Parent=gene-PN289_01700;Dbxref=NCBI_GP:MDB8827358.1;Name=MDB8827358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845035.1;locus_tag=PN289_01700;product=hypothetical protein;protein_id=MDB8827358.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 64898 65308 . - . ID=gene-PN289_01705;Name=PN289_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01705 JAQMMZ010000002.1 Protein Homology CDS 64898 65308 . - 0 ID=cds-MDB8827359.1;Parent=gene-PN289_01705;Dbxref=NCBI_GP:MDB8827359.1;Name=MDB8827359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842579.1;locus_tag=PN289_01705;product=hypothetical protein;protein_id=MDB8827359.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 65366 66097 . - . ID=gene-PN289_01710;Name=PN289_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01710 JAQMMZ010000002.1 Protein Homology CDS 65366 66097 . - 0 ID=cds-MDB8827360.1;Parent=gene-PN289_01710;Dbxref=NCBI_GP:MDB8827360.1;Name=MDB8827360.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842561.1;locus_tag=PN289_01710;product=HAD-IB family hydrolase;protein_id=MDB8827360.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 66249 67397 . + . ID=gene-PN289_01715;Name=PN289_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01715 JAQMMZ010000002.1 Protein Homology CDS 66249 67397 . + 0 ID=cds-MDB8827361.1;Parent=gene-PN289_01715;Dbxref=NCBI_GP:MDB8827361.1;Name=MDB8827361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845031.1;locus_tag=PN289_01715;product=hypothetical protein;protein_id=MDB8827361.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 67521 68177 . + . ID=gene-PN289_01720;Name=PN289_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01720 JAQMMZ010000002.1 Protein Homology CDS 67521 68177 . + 0 ID=cds-MDB8827362.1;Parent=gene-PN289_01720;Dbxref=NCBI_GP:MDB8827362.1;Name=MDB8827362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845030.1;locus_tag=PN289_01720;product=PAS domain-containing protein;protein_id=MDB8827362.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 68481 68720 . + . ID=gene-PN289_01725;Name=PN289_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01725 JAQMMZ010000002.1 GeneMarkS-2+ CDS 68481 68720 . + 0 ID=cds-MDB8827363.1;Parent=gene-PN289_01725;Dbxref=NCBI_GP:MDB8827363.1;Name=MDB8827363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_01725;product=hypothetical protein;protein_id=MDB8827363.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 68837 69784 . + . ID=gene-PN289_01730;Name=PN289_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01730 JAQMMZ010000002.1 Protein Homology CDS 68837 69784 . + 0 ID=cds-MDB8827364.1;Parent=gene-PN289_01730;Dbxref=NCBI_GP:MDB8827364.1;Name=MDB8827364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842573.1;locus_tag=PN289_01730;product=hypothetical protein;protein_id=MDB8827364.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 69879 70133 . - . ID=gene-PN289_01735;Name=PN289_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01735 JAQMMZ010000002.1 Protein Homology CDS 69879 70133 . - 0 ID=cds-MDB8827365.1;Parent=gene-PN289_01735;Dbxref=NCBI_GP:MDB8827365.1;Name=MDB8827365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842548.1;locus_tag=PN289_01735;product=hypothetical protein;protein_id=MDB8827365.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 70267 71178 . + . ID=gene-PN289_01740;Name=PN289_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01740 JAQMMZ010000002.1 Protein Homology CDS 70267 71178 . + 0 ID=cds-MDB8827366.1;Parent=gene-PN289_01740;Dbxref=NCBI_GP:MDB8827366.1;Name=MDB8827366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842522.1;locus_tag=PN289_01740;product=MBL fold metallo-hydrolase;protein_id=MDB8827366.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 71201 72007 . + . ID=gene-PN289_01745;Name=PN289_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01745 JAQMMZ010000002.1 Protein Homology CDS 71201 72007 . + 0 ID=cds-MDB8827367.1;Parent=gene-PN289_01745;Dbxref=NCBI_GP:MDB8827367.1;Name=MDB8827367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595331.1;locus_tag=PN289_01745;product=GTP pyrophosphokinase family protein;protein_id=MDB8827367.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 72009 72704 . + . ID=gene-PN289_01750;Name=PN289_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01750 JAQMMZ010000002.1 Protein Homology CDS 72009 72704 . + 0 ID=cds-MDB8827368.1;Parent=gene-PN289_01750;Dbxref=NCBI_GP:MDB8827368.1;Name=MDB8827368.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842496.1;locus_tag=PN289_01750;product=metallophosphoesterase;protein_id=MDB8827368.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 72701 73264 . + . ID=gene-PN289_01755;Name=PN289_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01755 JAQMMZ010000002.1 Protein Homology CDS 72701 73264 . + 0 ID=cds-MDB8827369.1;Parent=gene-PN289_01755;Dbxref=NCBI_GP:MDB8827369.1;Name=MDB8827369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842491.1;locus_tag=PN289_01755;product=haloacid dehalogenase-like hydrolase;protein_id=MDB8827369.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 73358 74281 . - . ID=gene-PN289_01760;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=PN289_01760 JAQMMZ010000002.1 Protein Homology CDS 73358 74281 . - 0 ID=cds-MDB8827370.1;Parent=gene-PN289_01760;Dbxref=NCBI_GP:MDB8827370.1;Name=MDB8827370.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845023.1;locus_tag=PN289_01760;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=MDB8827370.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 74536 75693 . + . ID=gene-PN289_01765;Name=PN289_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01765 JAQMMZ010000002.1 Protein Homology CDS 74536 75693 . + 0 ID=cds-MDB8827371.1;Parent=gene-PN289_01765;Dbxref=NCBI_GP:MDB8827371.1;Name=MDB8827371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842537.1;locus_tag=PN289_01765;product=galactosyldiacylglycerol synthase;protein_id=MDB8827371.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 75821 76510 . + . ID=gene-PN289_01770;Name=PN289_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01770 JAQMMZ010000002.1 Protein Homology CDS 75821 76510 . + 0 ID=cds-MDB8827372.1;Parent=gene-PN289_01770;Dbxref=NCBI_GP:MDB8827372.1;Name=MDB8827372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845020.1;locus_tag=PN289_01770;product=polysaccharide deacetylase family protein;protein_id=MDB8827372.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 76522 77556 . + . ID=gene-PN289_01775;Name=PN289_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01775 JAQMMZ010000002.1 Protein Homology CDS 76522 77556 . + 0 ID=cds-MDB8827373.1;Parent=gene-PN289_01775;Dbxref=NCBI_GP:MDB8827373.1;Name=MDB8827373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842566.1;locus_tag=PN289_01775;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=MDB8827373.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 78023 83176 . + . ID=gene-PN289_01780;Name=PN289_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01780 JAQMMZ010000002.1 Protein Homology CDS 78023 83176 . + 0 ID=cds-MDB8827374.1;Parent=gene-PN289_01780;Dbxref=NCBI_GP:MDB8827374.1;Name=MDB8827374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842540.1;locus_tag=PN289_01780;product=cell wall-binding repeat-containing protein;protein_id=MDB8827374.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 83572 83877 . + . ID=gene-PN289_01785;Name=PN289_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01785 JAQMMZ010000002.1 GeneMarkS-2+ CDS 83572 83877 . + 0 ID=cds-MDB8827375.1;Parent=gene-PN289_01785;Dbxref=NCBI_GP:MDB8827375.1;Name=MDB8827375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_01785;product=hypothetical protein;protein_id=MDB8827375.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 83965 86316 . + . ID=gene-PN289_01790;Name=PN289_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01790 JAQMMZ010000002.1 GeneMarkS-2+ CDS 83965 86316 . + 0 ID=cds-MDB8827376.1;Parent=gene-PN289_01790;Dbxref=NCBI_GP:MDB8827376.1;Name=MDB8827376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_01790;product=hypothetical protein;protein_id=MDB8827376.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 86400 87041 . + . ID=gene-PN289_01795;Name=PN289_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01795 JAQMMZ010000002.1 Protein Homology CDS 86400 87041 . + 0 ID=cds-MDB8827377.1;Parent=gene-PN289_01795;Dbxref=NCBI_GP:MDB8827377.1;Name=MDB8827377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845011.1;locus_tag=PN289_01795;product=hypothetical protein;protein_id=MDB8827377.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 87119 92242 . + . ID=gene-PN289_01800;Name=PN289_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01800 JAQMMZ010000002.1 Protein Homology CDS 87119 92242 . + 0 ID=cds-MDB8827378.1;Parent=gene-PN289_01800;Dbxref=NCBI_GP:MDB8827378.1;Name=MDB8827378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595334.1;locus_tag=PN289_01800;product=cell wall-binding repeat-containing protein;protein_id=MDB8827378.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 92544 98078 . + . ID=gene-PN289_01805;Name=PN289_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01805 JAQMMZ010000002.1 Protein Homology CDS 92544 98078 . + 0 ID=cds-MDB8827379.1;Parent=gene-PN289_01805;Dbxref=NCBI_GP:MDB8827379.1;Name=MDB8827379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595335.1;locus_tag=PN289_01805;product=cell wall-binding repeat-containing protein;protein_id=MDB8827379.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 98368 100443 . + . ID=gene-PN289_01810;Name=PN289_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01810 JAQMMZ010000002.1 Protein Homology CDS 98368 100443 . + 0 ID=cds-MDB8827380.1;Parent=gene-PN289_01810;Dbxref=NCBI_GP:MDB8827380.1;Name=MDB8827380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845008.1;locus_tag=PN289_01810;product=NEAT domain-containing protein;protein_id=MDB8827380.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 100430 101527 . + . ID=gene-PN289_01815;Name=PN289_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01815 JAQMMZ010000002.1 Protein Homology CDS 100430 101527 . + 0 ID=cds-MDB8827381.1;Parent=gene-PN289_01815;Dbxref=NCBI_GP:MDB8827381.1;Name=MDB8827381.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843598.1;locus_tag=PN289_01815;product=heme-binding Shp domain-containing protein;protein_id=MDB8827381.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 101520 102440 . + . ID=gene-PN289_01820;Name=isdE;gbkey=Gene;gene=isdE;gene_biotype=protein_coding;locus_tag=PN289_01820 JAQMMZ010000002.1 Protein Homology CDS 101520 102440 . + 0 ID=cds-MDB8827382.1;Parent=gene-PN289_01820;Dbxref=NCBI_GP:MDB8827382.1;Name=MDB8827382.1;Ontology_term=GO:0015886,GO:0020037,GO:0016020;gbkey=CDS;gene=isdE;go_component=membrane|0016020||IEA;go_function=heme binding|0020037||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843570.1;locus_tag=PN289_01820;product=heme ABC transporter substrate-binding protein IsdE;protein_id=MDB8827382.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 102440 103504 . + . ID=gene-PN289_01825;Name=PN289_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01825 JAQMMZ010000002.1 Protein Homology CDS 102440 103504 . + 0 ID=cds-MDB8827383.1;Parent=gene-PN289_01825;Dbxref=NCBI_GP:MDB8827383.1;Name=MDB8827383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845006.1;locus_tag=PN289_01825;product=iron ABC transporter permease;protein_id=MDB8827383.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 103494 104258 . + . ID=gene-PN289_01830;Name=PN289_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01830 JAQMMZ010000002.1 Protein Homology CDS 103494 104258 . + 0 ID=cds-MDB8827384.1;Parent=gene-PN289_01830;Dbxref=NCBI_GP:MDB8827384.1;Name=MDB8827384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845005.1;locus_tag=PN289_01830;product=ABC transporter ATP-binding protein;protein_id=MDB8827384.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 104386 105861 . + . ID=gene-PN289_01835;Name=PN289_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01835 JAQMMZ010000002.1 Protein Homology CDS 104386 105861 . + 0 ID=cds-MDB8827385.1;Parent=gene-PN289_01835;Dbxref=NCBI_GP:MDB8827385.1;Name=MDB8827385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843559.1;locus_tag=PN289_01835;product=cell wall-binding repeat-containing protein;protein_id=MDB8827385.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 106108 107448 . + . ID=gene-PN289_01840;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PN289_01840 JAQMMZ010000002.1 Protein Homology CDS 106108 107448 . + 0 ID=cds-MDB8827386.1;Parent=gene-PN289_01840;Dbxref=NCBI_GP:MDB8827386.1;Name=MDB8827386.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843600.1;locus_tag=PN289_01840;product=RNA polymerase factor sigma-54;protein_id=MDB8827386.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 107603 108547 . + . ID=gene-PN289_01845;Name=PN289_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01845 JAQMMZ010000002.1 Protein Homology CDS 107603 108547 . + 0 ID=cds-MDB8827387.1;Parent=gene-PN289_01845;Dbxref=NCBI_GP:MDB8827387.1;Name=MDB8827387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845002.1;locus_tag=PN289_01845;product=NTP transferase domain-containing protein;protein_id=MDB8827387.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 108554 109120 . + . ID=gene-PN289_01850;Name=PN289_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01850 JAQMMZ010000002.1 Protein Homology CDS 108554 109120 . + 0 ID=cds-MDB8827388.1;Parent=gene-PN289_01850;Dbxref=NCBI_GP:MDB8827388.1;Name=MDB8827388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845001.1;locus_tag=PN289_01850;product=histidine phosphatase family protein;protein_id=MDB8827388.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 109127 110155 . + . ID=gene-PN289_01855;Name=PN289_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01855 JAQMMZ010000002.1 Protein Homology CDS 109127 110155 . + 0 ID=cds-MDB8827389.1;Parent=gene-PN289_01855;Dbxref=NCBI_GP:MDB8827389.1;Name=MDB8827389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845000.1;locus_tag=PN289_01855;product=XdhC family protein;protein_id=MDB8827389.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 110142 111188 . + . ID=gene-PN289_01860;Name=PN289_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01860 JAQMMZ010000002.1 Protein Homology CDS 110142 111188 . + 0 ID=cds-MDB8827390.1;Parent=gene-PN289_01860;Dbxref=NCBI_GP:MDB8827390.1;Name=MDB8827390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004077679.1;locus_tag=PN289_01860;product=molybdopterin-binding protein;protein_id=MDB8827390.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 111211 111684 . + . ID=gene-PN289_01865;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PN289_01865 JAQMMZ010000002.1 Protein Homology CDS 111211 111684 . + 0 ID=cds-MDB8827391.1;Parent=gene-PN289_01865;Dbxref=NCBI_GP:MDB8827391.1;Name=MDB8827391.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008371850.1;locus_tag=PN289_01865;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=MDB8827391.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 111672 112658 . + . ID=gene-PN289_01870;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PN289_01870 JAQMMZ010000002.1 Protein Homology CDS 111672 112658 . + 0 ID=cds-MDB8827392.1;Parent=gene-PN289_01870;Dbxref=NCBI_GP:MDB8827392.1;Name=MDB8827392.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595339.1;locus_tag=PN289_01870;product=GTP 3'%2C8-cyclase MoaA;protein_id=MDB8827392.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 112718 113653 . + . ID=gene-PN289_01875;Name=PN289_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01875 JAQMMZ010000002.1 Protein Homology CDS 112718 113653 . + 0 ID=cds-MDB8827393.1;Parent=gene-PN289_01875;Dbxref=NCBI_GP:MDB8827393.1;Name=MDB8827393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844996.1;locus_tag=PN289_01875;product=molybdopterin-binding protein;protein_id=MDB8827393.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 113821 114696 . + . ID=gene-PN289_01880;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PN289_01880 JAQMMZ010000002.1 Protein Homology CDS 113821 114696 . + 0 ID=cds-MDB8827394.1;Parent=gene-PN289_01880;Dbxref=NCBI_GP:MDB8827394.1;Name=MDB8827394.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844995.1;locus_tag=PN289_01880;product=molybdate ABC transporter substrate-binding protein;protein_id=MDB8827394.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 114750 115433 . + . ID=gene-PN289_01885;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PN289_01885 JAQMMZ010000002.1 Protein Homology CDS 114750 115433 . + 0 ID=cds-MDB8827395.1;Parent=gene-PN289_01885;Dbxref=NCBI_GP:MDB8827395.1;Name=MDB8827395.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844994.1;locus_tag=PN289_01885;product=molybdate ABC transporter permease subunit;protein_id=MDB8827395.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 115569 116723 . + . ID=gene-PN289_01890;Name=PN289_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01890 JAQMMZ010000002.1 Protein Homology CDS 115569 116723 . + 0 ID=cds-MDB8827396.1;Parent=gene-PN289_01890;Dbxref=NCBI_GP:MDB8827396.1;Name=MDB8827396.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844993.1;locus_tag=PN289_01890;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827396.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 116913 117794 . + . ID=gene-PN289_01895;Name=PN289_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01895 JAQMMZ010000002.1 Protein Homology CDS 116913 117794 . + 0 ID=cds-MDB8827397.1;Parent=gene-PN289_01895;Dbxref=NCBI_GP:MDB8827397.1;Name=MDB8827397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844992.1;locus_tag=PN289_01895;product=xanthine dehydrogenase family protein subunit M;protein_id=MDB8827397.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 117797 118282 . + . ID=gene-PN289_01900;Name=PN289_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01900 JAQMMZ010000002.1 Protein Homology CDS 117797 118282 . + 0 ID=cds-MDB8827398.1;Parent=gene-PN289_01900;Dbxref=NCBI_GP:MDB8827398.1;Name=MDB8827398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844991.1;locus_tag=PN289_01900;product=(2Fe-2S)-binding protein;protein_id=MDB8827398.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 118284 120629 . + . ID=gene-PN289_01905;Name=PN289_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01905 JAQMMZ010000002.1 Protein Homology CDS 118284 120629 . + 0 ID=cds-MDB8827399.1;Parent=gene-PN289_01905;Dbxref=NCBI_GP:MDB8827399.1;Name=MDB8827399.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844990.1;locus_tag=PN289_01905;product=molybdopterin-dependent oxidoreductase;protein_id=MDB8827399.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 120712 121119 . + . ID=gene-PN289_01910;Name=PN289_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01910 JAQMMZ010000002.1 Protein Homology CDS 120712 121119 . + 0 ID=cds-MDB8827400.1;Parent=gene-PN289_01910;Dbxref=NCBI_GP:MDB8827400.1;Name=MDB8827400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844989.1;locus_tag=PN289_01910;product=YopX family protein;protein_id=MDB8827400.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 121129 121671 . + . ID=gene-PN289_01915;Name=PN289_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01915 JAQMMZ010000002.1 Protein Homology CDS 121129 121671 . + 0 ID=cds-MDB8827401.1;Parent=gene-PN289_01915;Dbxref=NCBI_GP:MDB8827401.1;Name=MDB8827401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844988.1;locus_tag=PN289_01915;product=hypothetical protein;protein_id=MDB8827401.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 121673 122116 . + . ID=gene-PN289_01920;Name=PN289_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01920 JAQMMZ010000002.1 GeneMarkS-2+ CDS 121673 122116 . + 0 ID=cds-MDB8827402.1;Parent=gene-PN289_01920;Dbxref=NCBI_GP:MDB8827402.1;Name=MDB8827402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_01920;product=hypothetical protein;protein_id=MDB8827402.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 122131 122709 . + . ID=gene-PN289_01925;Name=PN289_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01925 JAQMMZ010000002.1 Protein Homology CDS 122131 122709 . + 0 ID=cds-MDB8827403.1;Parent=gene-PN289_01925;Dbxref=NCBI_GP:MDB8827403.1;Name=MDB8827403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844986.1;locus_tag=PN289_01925;product=HD domain-containing protein;protein_id=MDB8827403.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 123120 124148 . + . ID=gene-PN289_01930;Name=PN289_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01930 JAQMMZ010000002.1 Protein Homology CDS 123120 124148 . + 0 ID=cds-MDB8827404.1;Parent=gene-PN289_01930;Dbxref=NCBI_GP:MDB8827404.1;Name=MDB8827404.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844985.1;locus_tag=PN289_01930;product=sugar-binding domain-containing protein;protein_id=MDB8827404.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 124183 125190 . + . ID=gene-PN289_01935;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PN289_01935 JAQMMZ010000002.1 Protein Homology CDS 124183 125190 . + 0 ID=cds-MDB8827405.1;Parent=gene-PN289_01935;Dbxref=NCBI_GP:MDB8827405.1;Name=MDB8827405.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843571.1;locus_tag=PN289_01935;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MDB8827405.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 125413 126612 . + . ID=gene-PN289_01940;Name=PN289_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01940 JAQMMZ010000002.1 Protein Homology CDS 125413 126612 . + 0 ID=cds-MDB8827406.1;Parent=gene-PN289_01940;Dbxref=NCBI_GP:MDB8827406.1;Name=MDB8827406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003429565.1;locus_tag=PN289_01940;product=phosphoglycerate kinase;protein_id=MDB8827406.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 126769 127509 . + . ID=gene-PN289_01945;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PN289_01945 JAQMMZ010000002.1 Protein Homology CDS 126769 127509 . + 0 ID=cds-MDB8827407.1;Parent=gene-PN289_01945;Dbxref=NCBI_GP:MDB8827407.1;Name=MDB8827407.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007791163.1;locus_tag=PN289_01945;product=triose-phosphate isomerase;protein_id=MDB8827407.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 127583 129109 . + . ID=gene-PN289_01950;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=PN289_01950 JAQMMZ010000002.1 Protein Homology CDS 127583 129109 . + 0 ID=cds-MDB8827408.1;Parent=gene-PN289_01950;Dbxref=NCBI_GP:MDB8827408.1;Name=MDB8827408.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843588.1;locus_tag=PN289_01950;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=MDB8827408.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 129367 130653 . + . ID=gene-PN289_01955;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PN289_01955 JAQMMZ010000002.1 Protein Homology CDS 129367 130653 . + 0 ID=cds-MDB8827409.1;Parent=gene-PN289_01955;Dbxref=NCBI_GP:MDB8827409.1;Name=MDB8827409.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898301.1;locus_tag=PN289_01955;product=phosphopyruvate hydratase;protein_id=MDB8827409.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 130914 131147 . + . ID=gene-PN289_01960;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PN289_01960 JAQMMZ010000002.1 Protein Homology CDS 130914 131147 . + 0 ID=cds-MDB8827410.1;Parent=gene-PN289_01960;Dbxref=NCBI_GP:MDB8827410.1;Name=MDB8827410.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843596.1;locus_tag=PN289_01960;product=preprotein translocase subunit SecG;protein_id=MDB8827410.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 131266 133377 . + . ID=gene-PN289_01965;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PN289_01965 JAQMMZ010000002.1 Protein Homology CDS 131266 133377 . + 0 ID=cds-MDB8827411.1;Parent=gene-PN289_01965;Dbxref=NCBI_GP:MDB8827411.1;Name=MDB8827411.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843587.1;locus_tag=PN289_01965;product=ribonuclease R;protein_id=MDB8827411.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 133390 133845 . + . ID=gene-PN289_01970;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PN289_01970 JAQMMZ010000002.1 Protein Homology CDS 133390 133845 . + 0 ID=cds-MDB8827412.1;Parent=gene-PN289_01970;Dbxref=NCBI_GP:MDB8827412.1;Name=MDB8827412.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421925.1;locus_tag=PN289_01970;product=SsrA-binding protein SmpB;protein_id=MDB8827412.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 134038 135072 . + . ID=gene-PN289_01975;Name=PN289_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01975 JAQMMZ010000002.1 Protein Homology CDS 134038 135072 . + 0 ID=cds-MDB8827413.1;Parent=gene-PN289_01975;Dbxref=NCBI_GP:MDB8827413.1;Name=MDB8827413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843579.1;locus_tag=PN289_01975;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827413.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 135111 136505 . + . ID=gene-PN289_01980;Name=PN289_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01980 JAQMMZ010000002.1 Protein Homology CDS 135111 136505 . + 0 ID=cds-MDB8827414.1;Parent=gene-PN289_01980;Dbxref=NCBI_GP:MDB8827414.1;Name=MDB8827414.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844973.1;locus_tag=PN289_01980;product=aminopeptidase;protein_id=MDB8827414.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 136688 137374 . + . ID=gene-PN289_01985;Name=PN289_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01985 JAQMMZ010000002.1 Protein Homology CDS 136688 137374 . + 0 ID=cds-MDB8827415.1;Parent=gene-PN289_01985;Dbxref=NCBI_GP:MDB8827415.1;Name=MDB8827415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843562.1;locus_tag=PN289_01985;product=YdjY domain-containing protein;protein_id=MDB8827415.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 137804 138577 . + . ID=gene-PN289_01990;Name=PN289_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01990 JAQMMZ010000002.1 Protein Homology CDS 137804 138577 . + 0 ID=cds-MDB8827416.1;Parent=gene-PN289_01990;Dbxref=NCBI_GP:MDB8827416.1;Name=MDB8827416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009247834.1;locus_tag=PN289_01990;product=TVP38/TMEM64 family protein;protein_id=MDB8827416.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 138612 139298 . + . ID=gene-PN289_01995;Name=PN289_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_01995 JAQMMZ010000002.1 Protein Homology CDS 138612 139298 . + 0 ID=cds-MDB8827417.1;Parent=gene-PN289_01995;Dbxref=NCBI_GP:MDB8827417.1;Name=MDB8827417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844970.1;locus_tag=PN289_01995;product=TVP38/TMEM64 family protein;protein_id=MDB8827417.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 139348 140331 . + . ID=gene-PN289_02000;Name=PN289_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02000 JAQMMZ010000002.1 Protein Homology CDS 139348 140331 . + 0 ID=cds-MDB8827418.1;Parent=gene-PN289_02000;Dbxref=NCBI_GP:MDB8827418.1;Name=MDB8827418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595343.1;locus_tag=PN289_02000;product=(Fe-S)-binding protein;protein_id=MDB8827418.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 140412 141740 . + . ID=gene-PN289_02005;Name=PN289_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02005 JAQMMZ010000002.1 Protein Homology CDS 140412 141740 . + 0 ID=cds-MDB8827419.1;Parent=gene-PN289_02005;Dbxref=NCBI_GP:MDB8827419.1;Name=MDB8827419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843581.1;locus_tag=PN289_02005;product=hemolysin family protein;protein_id=MDB8827419.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 141894 142742 . - . ID=gene-PN289_02010;Name=PN289_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02010 JAQMMZ010000002.1 Protein Homology CDS 141894 142742 . - 0 ID=cds-MDB8827420.1;Parent=gene-PN289_02010;Dbxref=NCBI_GP:MDB8827420.1;Name=MDB8827420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843595.1;locus_tag=PN289_02010;product=NAD(+)/NADH kinase;protein_id=MDB8827420.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 142870 143793 . + . ID=gene-PN289_02015;Name=PN289_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02015 JAQMMZ010000002.1 Protein Homology CDS 142870 143793 . + 0 ID=cds-MDB8827421.1;Parent=gene-PN289_02015;Dbxref=NCBI_GP:MDB8827421.1;Name=MDB8827421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843582.1;locus_tag=PN289_02015;product=RluA family pseudouridine synthase;protein_id=MDB8827421.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 143865 144875 . + . ID=gene-PN289_02020;Name=PN289_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02020 JAQMMZ010000002.1 Protein Homology CDS 143865 144875 . + 0 ID=cds-MDB8827422.1;Parent=gene-PN289_02020;Dbxref=NCBI_GP:MDB8827422.1;Name=MDB8827422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843593.1;locus_tag=PN289_02020;product=nucleoid-associated protein;protein_id=MDB8827422.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 144965 145192 . - . ID=gene-PN289_02025;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PN289_02025 JAQMMZ010000002.1 Protein Homology CDS 144965 145192 . - 0 ID=cds-MDB8827423.1;Parent=gene-PN289_02025;Dbxref=NCBI_GP:MDB8827423.1;Name=MDB8827423.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843564.1;locus_tag=PN289_02025;product=acyl carrier protein;protein_id=MDB8827423.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 145459 146484 . + . ID=gene-PN289_02030;Name=PN289_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02030 JAQMMZ010000002.1 Protein Homology CDS 145459 146484 . + 0 ID=cds-MDB8827424.1;Parent=gene-PN289_02030;Dbxref=NCBI_GP:MDB8827424.1;Name=MDB8827424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843560.1;locus_tag=PN289_02030;product=LacI family DNA-binding transcriptional regulator;protein_id=MDB8827424.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 146565 146756 . + . ID=gene-PN289_02035;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PN289_02035 JAQMMZ010000002.1 cmsearch ncRNA 146565 146756 . + . ID=rna-PN289_02035;Parent=gene-PN289_02035;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_02035;product=6S RNA JAQMMZ010000002.1 cmsearch exon 146565 146756 . + . ID=exon-PN289_02035-1;Parent=rna-PN289_02035;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_02035;product=6S RNA JAQMMZ010000002.1 Genbank gene 146819 148210 . + . ID=gene-PN289_02040;Name=PN289_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02040 JAQMMZ010000002.1 Protein Homology CDS 146819 148210 . + 0 ID=cds-MDB8827425.1;Parent=gene-PN289_02040;Dbxref=NCBI_GP:MDB8827425.1;Name=MDB8827425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843580.1;locus_tag=PN289_02040;product=PLP-dependent aminotransferase family protein;protein_id=MDB8827425.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 148320 148520 . + . ID=gene-PN289_02045;Name=PN289_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02045 JAQMMZ010000002.1 Protein Homology CDS 148320 148520 . + 0 ID=cds-MDB8827426.1;Parent=gene-PN289_02045;Dbxref=NCBI_GP:MDB8827426.1;Name=MDB8827426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843589.1;locus_tag=PN289_02045;product=DUF896 domain-containing protein;protein_id=MDB8827426.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 148561 149475 . - . ID=gene-PN289_02050;Name=PN289_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02050 JAQMMZ010000002.1 Protein Homology CDS 148561 149475 . - 0 ID=cds-MDB8827427.1;Parent=gene-PN289_02050;Dbxref=NCBI_GP:MDB8827427.1;Name=MDB8827427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844618.1;locus_tag=PN289_02050;product=selenium metabolism-associated LysR family transcriptional regulator;protein_id=MDB8827427.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 150055 150849 . - . ID=gene-PN289_02055;Name=PN289_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02055 JAQMMZ010000002.1 Protein Homology CDS 150055 150849 . - 0 ID=cds-MDB8827428.1;Parent=gene-PN289_02055;Dbxref=NCBI_GP:MDB8827428.1;Name=MDB8827428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844619.1;locus_tag=PN289_02055;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=MDB8827428.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 151077 151742 . + . ID=gene-PN289_02060;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PN289_02060 JAQMMZ010000002.1 Protein Homology CDS 151077 151742 . + 0 ID=cds-MDB8827429.1;Parent=gene-PN289_02060;Dbxref=NCBI_GP:MDB8827429.1;Name=MDB8827429.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844624.1;locus_tag=PN289_02060;product=deoxyribose-phosphate aldolase;protein_id=MDB8827429.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 151726 152916 . + . ID=gene-PN289_02065;Name=PN289_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02065 JAQMMZ010000002.1 Protein Homology CDS 151726 152916 . + 0 ID=cds-MDB8827430.1;Parent=gene-PN289_02065;Dbxref=NCBI_GP:MDB8827430.1;Name=MDB8827430.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844961.1;locus_tag=PN289_02065;product=phosphopentomutase;protein_id=MDB8827430.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 152944 154146 . + . ID=gene-PN289_02070;Name=PN289_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02070 JAQMMZ010000002.1 Protein Homology CDS 152944 154146 . + 0 ID=cds-MDB8827431.1;Parent=gene-PN289_02070;Dbxref=NCBI_GP:MDB8827431.1;Name=MDB8827431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844611.1;locus_tag=PN289_02070;product=nucleoside transporter C-terminal domain-containing protein;protein_id=MDB8827431.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 154253 155554 . + . ID=gene-PN289_02075;Name=PN289_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02075 JAQMMZ010000002.1 Protein Homology CDS 154253 155554 . + 0 ID=cds-MDB8827432.1;Parent=gene-PN289_02075;Dbxref=NCBI_GP:MDB8827432.1;Name=MDB8827432.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844597.1;locus_tag=PN289_02075;product=pyrimidine-nucleoside phosphorylase;protein_id=MDB8827432.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 155735 157078 . + . ID=gene-PN289_02080;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PN289_02080 JAQMMZ010000002.1 Protein Homology CDS 155735 157078 . + 0 ID=cds-MDB8827433.1;Parent=gene-PN289_02080;Dbxref=NCBI_GP:MDB8827433.1;Name=MDB8827433.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844616.1;locus_tag=PN289_02080;product=electron transport complex subunit RsxC;protein_id=MDB8827433.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 157097 158083 . + . ID=gene-PN289_02085;Name=PN289_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02085 JAQMMZ010000002.1 Protein Homology CDS 157097 158083 . + 0 ID=cds-MDB8827434.1;Parent=gene-PN289_02085;Dbxref=NCBI_GP:MDB8827434.1;Name=MDB8827434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419041.1;locus_tag=PN289_02085;product=RnfABCDGE type electron transport complex subunit D;protein_id=MDB8827434.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 158083 158649 . + . ID=gene-PN289_02090;Name=PN289_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02090 JAQMMZ010000002.1 Protein Homology CDS 158083 158649 . + 0 ID=cds-MDB8827435.1;Parent=gene-PN289_02090;Dbxref=NCBI_GP:MDB8827435.1;Name=MDB8827435.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846141.1;locus_tag=PN289_02090;product=RnfABCDGE type electron transport complex subunit G;protein_id=MDB8827435.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 158661 159254 . + . ID=gene-PN289_02095;Name=PN289_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02095 JAQMMZ010000002.1 Protein Homology CDS 158661 159254 . + 0 ID=cds-MDB8827436.1;Parent=gene-PN289_02095;Dbxref=NCBI_GP:MDB8827436.1;Name=MDB8827436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844610.1;locus_tag=PN289_02095;product=electron transport complex subunit E;protein_id=MDB8827436.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 159268 159843 . + . ID=gene-PN289_02100;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PN289_02100 JAQMMZ010000002.1 Protein Homology CDS 159268 159843 . + 0 ID=cds-MDB8827437.1;Parent=gene-PN289_02100;Dbxref=NCBI_GP:MDB8827437.1;Name=MDB8827437.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419046.1;locus_tag=PN289_02100;product=electron transport complex subunit RsxA;protein_id=MDB8827437.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 159859 160776 . + . ID=gene-PN289_02105;Name=PN289_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02105 JAQMMZ010000002.1 Protein Homology CDS 159859 160776 . + 0 ID=cds-MDB8827438.1;Parent=gene-PN289_02105;Dbxref=NCBI_GP:MDB8827438.1;Name=MDB8827438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595463.1;locus_tag=PN289_02105;product=Fe-S cluster domain-containing protein;protein_id=MDB8827438.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 161009 161668 . + . ID=gene-PN289_02110;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PN289_02110 JAQMMZ010000002.1 Protein Homology CDS 161009 161668 . + 0 ID=cds-MDB8827439.1;Parent=gene-PN289_02110;Dbxref=NCBI_GP:MDB8827439.1;Name=MDB8827439.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905331.1;locus_tag=PN289_02110;product=DNA repair protein RadC;protein_id=MDB8827439.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 161911 162960 . + . ID=gene-PN289_02115;Name=PN289_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02115 JAQMMZ010000002.1 Protein Homology CDS 161911 162960 . + 0 ID=cds-MDB8827440.1;Parent=gene-PN289_02115;Dbxref=NCBI_GP:MDB8827440.1;Name=MDB8827440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844587.1;locus_tag=PN289_02115;product=rod shape-determining protein;protein_id=MDB8827440.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 162973 163854 . + . ID=gene-PN289_02120;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PN289_02120 JAQMMZ010000002.1 Protein Homology CDS 162973 163854 . + 0 ID=cds-MDB8827441.1;Parent=gene-PN289_02120;Dbxref=NCBI_GP:MDB8827441.1;Name=MDB8827441.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844594.1;locus_tag=PN289_02120;product=rod shape-determining protein MreC;protein_id=MDB8827441.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 163864 164349 . + . ID=gene-PN289_02125;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PN289_02125 JAQMMZ010000002.1 Protein Homology CDS 163864 164349 . + 0 ID=cds-MDB8827442.1;Parent=gene-PN289_02125;Dbxref=NCBI_GP:MDB8827442.1;Name=MDB8827442.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844586.1;locus_tag=PN289_02125;product=rod shape-determining protein MreD;protein_id=MDB8827442.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 164359 167397 . + . ID=gene-PN289_02130;Name=PN289_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02130 JAQMMZ010000002.1 Protein Homology CDS 164359 167397 . + 0 ID=cds-MDB8827443.1;Parent=gene-PN289_02130;Dbxref=NCBI_GP:MDB8827443.1;Name=MDB8827443.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844613.1;locus_tag=PN289_02130;product=penicillin-binding transpeptidase domain-containing protein;protein_id=MDB8827443.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 167414 168535 . + . ID=gene-PN289_02135;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=PN289_02135 JAQMMZ010000002.1 Protein Homology CDS 167414 168535 . + 0 ID=cds-MDB8827444.1;Parent=gene-PN289_02135;Dbxref=NCBI_GP:MDB8827444.1;Name=MDB8827444.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846132.1;locus_tag=PN289_02135;product=rod shape-determining protein RodA;protein_id=MDB8827444.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 168569 170443 . + . ID=gene-PN289_02140;Name=PN289_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02140 JAQMMZ010000002.1 Protein Homology CDS 168569 170443 . + 0 ID=cds-MDB8827445.1;Parent=gene-PN289_02140;Dbxref=NCBI_GP:MDB8827445.1;Name=MDB8827445.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844592.1;locus_tag=PN289_02140;product=TIGR03960 family B12-binding radical SAM protein;protein_id=MDB8827445.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 170443 171144 . + . ID=gene-PN289_02145;Name=PN289_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02145 JAQMMZ010000002.1 Protein Homology CDS 170443 171144 . + 0 ID=cds-MDB8827446.1;Parent=gene-PN289_02145;Dbxref=NCBI_GP:MDB8827446.1;Name=MDB8827446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844589.1;locus_tag=PN289_02145;product=TIGR03936 family radical SAM-associated protein;protein_id=MDB8827446.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 171148 172530 . + . ID=gene-PN289_02150;Name=PN289_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02150 JAQMMZ010000002.1 Protein Homology CDS 171148 172530 . + 0 ID=cds-MDB8827447.1;Parent=gene-PN289_02150;Dbxref=NCBI_GP:MDB8827447.1;Name=MDB8827447.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844628.1;locus_tag=PN289_02150;product=ribonuclease E/G;protein_id=MDB8827447.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 172560 172931 . + . ID=gene-PN289_02155;Name=PN289_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02155 JAQMMZ010000002.1 Protein Homology CDS 172560 172931 . + 0 ID=cds-MDB8827448.1;Parent=gene-PN289_02155;Dbxref=NCBI_GP:MDB8827448.1;Name=MDB8827448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846129.1;locus_tag=PN289_02155;product=CrcB family protein;protein_id=MDB8827448.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 172957 173355 . + . ID=gene-PN289_02160;Name=PN289_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02160 JAQMMZ010000002.1 Protein Homology CDS 172957 173355 . + 0 ID=cds-MDB8827449.1;Parent=gene-PN289_02160;Dbxref=NCBI_GP:MDB8827449.1;Name=MDB8827449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844591.1;locus_tag=PN289_02160;product=CrcB family protein;protein_id=MDB8827449.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 173374 174291 . + . ID=gene-PN289_02165;Name=PN289_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02165 JAQMMZ010000002.1 Protein Homology CDS 173374 174291 . + 0 ID=cds-MDB8827450.1;Parent=gene-PN289_02165;Dbxref=NCBI_GP:MDB8827450.1;Name=MDB8827450.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844588.1;locus_tag=PN289_02165;product=ribonuclease Z;protein_id=MDB8827450.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 174592 176424 . + . ID=gene-PN289_02170;Name=PN289_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02170 JAQMMZ010000002.1 Protein Homology CDS 174592 176424 . + 0 ID=cds-MDB8827451.1;Parent=gene-PN289_02170;Dbxref=NCBI_GP:MDB8827451.1;Name=MDB8827451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595464.1;locus_tag=PN289_02170;product=NAD(P)-binding protein;protein_id=MDB8827451.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 176418 178187 . + . ID=gene-PN289_02175;Name=PN289_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02175 JAQMMZ010000002.1 Protein Homology CDS 176418 178187 . + 0 ID=cds-MDB8827452.1;Parent=gene-PN289_02175;Dbxref=NCBI_GP:MDB8827452.1;Name=MDB8827452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844596.1;locus_tag=PN289_02175;product=NADH-dependent [FeFe] hydrogenase%2C group A6;protein_id=MDB8827452.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 178364 179005 . + . ID=gene-PN289_02180;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PN289_02180 JAQMMZ010000002.1 Protein Homology CDS 178364 179005 . + 0 ID=cds-MDB8827453.1;Parent=gene-PN289_02180;Dbxref=NCBI_GP:MDB8827453.1;Name=MDB8827453.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844631.1;locus_tag=PN289_02180;product=recombination regulator RecX;protein_id=MDB8827453.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 179152 179841 . + . ID=gene-PN289_02185;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PN289_02185 JAQMMZ010000002.1 Protein Homology CDS 179152 179841 . + 0 ID=cds-MDB8827454.1;Parent=gene-PN289_02185;Dbxref=NCBI_GP:MDB8827454.1;Name=MDB8827454.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846123.1;locus_tag=PN289_02185;product=nicotinate-nucleotide adenylyltransferase;protein_id=MDB8827454.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 179842 180456 . + . ID=gene-PN289_02190;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=PN289_02190 JAQMMZ010000002.1 Protein Homology CDS 179842 180456 . + 0 ID=cds-MDB8827455.1;Parent=gene-PN289_02190;Dbxref=NCBI_GP:MDB8827455.1;Name=MDB8827455.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846122.1;locus_tag=PN289_02190;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=MDB8827455.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 180547 180900 . + . ID=gene-PN289_02195;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PN289_02195 JAQMMZ010000002.1 Protein Homology CDS 180547 180900 . + 0 ID=cds-MDB8827456.1;Parent=gene-PN289_02195;Dbxref=NCBI_GP:MDB8827456.1;Name=MDB8827456.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846120.1;locus_tag=PN289_02195;product=ribosome silencing factor;protein_id=MDB8827456.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 180922 181947 . + . ID=gene-PN289_02200;Name=PN289_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02200 JAQMMZ010000002.1 Protein Homology CDS 180922 181947 . + 0 ID=cds-MDB8827457.1;Parent=gene-PN289_02200;Dbxref=NCBI_GP:MDB8827457.1;Name=MDB8827457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844607.1;locus_tag=PN289_02200;product=glycosyltransferase;protein_id=MDB8827457.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 182047 184467 . + . ID=gene-PN289_02205;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PN289_02205 JAQMMZ010000002.1 Protein Homology CDS 182047 184467 . + 0 ID=cds-MDB8827458.1;Parent=gene-PN289_02205;Dbxref=NCBI_GP:MDB8827458.1;Name=MDB8827458.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844582.1;locus_tag=PN289_02205;product=leucine--tRNA ligase;protein_id=MDB8827458.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 184662 185579 . + . ID=gene-PN289_02210;Name=PN289_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02210 JAQMMZ010000002.1 Protein Homology CDS 184662 185579 . + 0 ID=cds-MDB8827459.1;Parent=gene-PN289_02210;Dbxref=NCBI_GP:MDB8827459.1;Name=MDB8827459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846116.1;locus_tag=PN289_02210;product=DMT family transporter;protein_id=MDB8827459.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 185910 187109 . + . ID=gene-PN289_02215;Name=PN289_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02215 JAQMMZ010000002.1 Protein Homology CDS 185910 187109 . + 0 ID=cds-MDB8827460.1;Parent=gene-PN289_02215;Dbxref=NCBI_GP:MDB8827460.1;Name=MDB8827460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844583.1;locus_tag=PN289_02215;product=dicarboxylate/amino acid:cation symporter;protein_id=MDB8827460.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 187441 190152 . + . ID=gene-PN289_02220;Name=PN289_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02220 JAQMMZ010000002.1 Protein Homology CDS 187441 190152 . + 0 ID=cds-MDB8827461.1;Parent=gene-PN289_02220;Dbxref=NCBI_GP:MDB8827461.1;Name=MDB8827461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846114.1;locus_tag=PN289_02220;product=cation-translocating P-type ATPase;protein_id=MDB8827461.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 190355 190693 . + . ID=gene-PN289_02225;Name=PN289_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02225 JAQMMZ010000002.1 Protein Homology CDS 190355 190693 . + 0 ID=cds-MDB8827462.1;Parent=gene-PN289_02225;Dbxref=NCBI_GP:MDB8827462.1;Name=MDB8827462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844595.1;locus_tag=PN289_02225;product=DUF2325 domain-containing protein;protein_id=MDB8827462.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 190930 191754 . + . ID=gene-PN289_02230;Name=PN289_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02230 JAQMMZ010000002.1 Protein Homology CDS 190930 191754 . + 0 ID=cds-MDB8827463.1;Parent=gene-PN289_02230;Dbxref=NCBI_GP:MDB8827463.1;Name=MDB8827463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595465.1;locus_tag=PN289_02230;product=hypothetical protein;protein_id=MDB8827463.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 191813 193498 . - . ID=gene-PN289_02235;Name=PN289_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02235 JAQMMZ010000002.1 Protein Homology CDS 191813 193498 . - 0 ID=cds-MDB8827464.1;Parent=gene-PN289_02235;Dbxref=NCBI_GP:MDB8827464.1;Name=MDB8827464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846111.1;locus_tag=PN289_02235;product=D-alanyl-D-alanine carboxypeptidase;protein_id=MDB8827464.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 193760 194491 . + . ID=gene-PN289_02240;Name=PN289_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02240 JAQMMZ010000002.1 Protein Homology CDS 193760 194491 . + 0 ID=cds-MDB8827465.1;Parent=gene-PN289_02240;Dbxref=NCBI_GP:MDB8827465.1;Name=MDB8827465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843330.1;locus_tag=PN289_02240;product=helix-hairpin-helix domain-containing protein;protein_id=MDB8827465.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 194635 195618 . + . ID=gene-PN289_02245;Name=PN289_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02245 JAQMMZ010000002.1 Protein Homology CDS 194635 195618 . + 0 ID=cds-MDB8827466.1;Parent=gene-PN289_02245;Dbxref=NCBI_GP:MDB8827466.1;Name=MDB8827466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846110.1;locus_tag=PN289_02245;product=NAD(P)-binding domain-containing protein;protein_id=MDB8827466.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 195628 196680 . + . ID=gene-PN289_02250;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PN289_02250 JAQMMZ010000002.1 Protein Homology CDS 195628 196680 . + 0 ID=cds-MDB8827467.1;Parent=gene-PN289_02250;Dbxref=NCBI_GP:MDB8827467.1;Name=MDB8827467.1;Ontology_term=GO:0001887,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenium compound metabolic process|0001887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006315658.1;locus_tag=PN289_02250;product=selenide%2C water dikinase SelD;protein_id=MDB8827467.1;transl_except=(pos:195676..195678%2Caa:Sec);transl_table=11 JAQMMZ010000002.1 Genbank gene 196769 198190 . + . ID=gene-PN289_02255;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PN289_02255 JAQMMZ010000002.1 Protein Homology CDS 196769 198190 . + 0 ID=cds-MDB8827468.1;Parent=gene-PN289_02255;Dbxref=NCBI_GP:MDB8827468.1;Name=MDB8827468.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843332.1;locus_tag=PN289_02255;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=MDB8827468.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 198192 200081 . + . ID=gene-PN289_02260;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PN289_02260 JAQMMZ010000002.1 Protein Homology CDS 198192 200081 . + 0 ID=cds-MDB8827469.1;Parent=gene-PN289_02260;Dbxref=NCBI_GP:MDB8827469.1;Name=MDB8827469.1;Ontology_term=GO:0001514,GO:0006414,GO:0003746;gbkey=CDS;gene=selB;go_function=translation elongation factor activity|0003746||IEA;go_process=selenocysteine incorporation|0001514||IEA,translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843328.1;locus_tag=PN289_02260;product=selenocysteine-specific translation elongation factor;protein_id=MDB8827469.1;transl_table=11 JAQMMZ010000002.1 Genbank gene 200633 200833 . + . ID=gene-PN289_02265;Name=PN289_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02265 JAQMMZ010000002.1 Protein Homology CDS 200633 200833 . + 0 ID=cds-MDB8827470.1;Parent=gene-PN289_02265;Dbxref=NCBI_GP:MDB8827470.1;Name=MDB8827470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288163.1;locus_tag=PN289_02265;product=CsbD family protein;protein_id=MDB8827470.1;transl_table=11 ##sequence-region JAQMMZ010000030.1 1 9369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000030.1 Genbank region 1 9369 . + . ID=JAQMMZ010000030.1:1..9369;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000030.1 Genbank gene 665 5356 . + . ID=gene-PN289_09100;Name=PN289_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09100 JAQMMZ010000030.1 Protein Homology CDS 665 5356 . + 0 ID=cds-MDB8828800.1;Parent=gene-PN289_09100;Dbxref=NCBI_GP:MDB8828800.1;Name=MDB8828800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845533.1;locus_tag=PN289_09100;product=cell wall-binding repeat-containing protein;protein_id=MDB8828800.1;transl_table=11 JAQMMZ010000030.1 Genbank gene 5439 9149 . + . ID=gene-PN289_09105;Name=PN289_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09105 JAQMMZ010000030.1 Protein Homology CDS 5439 9149 . + 0 ID=cds-MDB8828801.1;Parent=gene-PN289_09105;Dbxref=NCBI_GP:MDB8828801.1;Name=MDB8828801.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=PN289_09105;product=S8 family serine peptidase;protein_id=MDB8828801.1;transl_table=11 ##sequence-region JAQMMZ010000031.1 1 8759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000031.1 Genbank region 1 8759 . + . ID=JAQMMZ010000031.1:1..8759;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000031.1 Genbank gene 3 76 . - . ID=gene-PN289_09110;Name=PN289_09110;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09110 JAQMMZ010000031.1 tRNAscan-SE tRNA 3 76 . - . ID=rna-PN289_09110;Parent=gene-PN289_09110;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09110;product=tRNA-Gly JAQMMZ010000031.1 tRNAscan-SE exon 3 76 . - . ID=exon-PN289_09110-1;Parent=rna-PN289_09110;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09110;product=tRNA-Gly JAQMMZ010000031.1 Genbank gene 88 159 . - . ID=gene-PN289_09115;Name=PN289_09115;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09115 JAQMMZ010000031.1 tRNAscan-SE tRNA 88 159 . - . ID=rna-PN289_09115;Parent=gene-PN289_09115;anticodon=(pos:complement(124..126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09115;product=tRNA-Glu JAQMMZ010000031.1 tRNAscan-SE exon 88 159 . - . ID=exon-PN289_09115-1;Parent=rna-PN289_09115;anticodon=(pos:complement(124..126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09115;product=tRNA-Glu JAQMMZ010000031.1 Genbank gene 611 1810 . + . ID=gene-PN289_09120;Name=PN289_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09120 JAQMMZ010000031.1 Protein Homology CDS 611 1810 . + 0 ID=cds-MDB8828802.1;Parent=gene-PN289_09120;Dbxref=NCBI_GP:MDB8828802.1;Name=MDB8828802.1;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845333.1;locus_tag=PN289_09120;product=glycosyltransferase;protein_id=MDB8828802.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 1859 2041 . - . ID=gene-PN289_09125;Name=PN289_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09125 JAQMMZ010000031.1 Protein Homology CDS 1859 2041 . - 0 ID=cds-MDB8828803.1;Parent=gene-PN289_09125;Dbxref=NCBI_GP:MDB8828803.1;Name=MDB8828803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843550.1;locus_tag=PN289_09125;product=hypothetical protein;protein_id=MDB8828803.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 2057 2656 . - . ID=gene-PN289_09130;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PN289_09130 JAQMMZ010000031.1 Protein Homology CDS 2057 2656 . - 0 ID=cds-MDB8828804.1;Parent=gene-PN289_09130;Dbxref=NCBI_GP:MDB8828804.1;Name=MDB8828804.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012634696.1;locus_tag=PN289_09130;product=recombination mediator RecR;protein_id=MDB8828804.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 2669 3013 . - . ID=gene-PN289_09135;Name=PN289_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09135 JAQMMZ010000031.1 Protein Homology CDS 2669 3013 . - 0 ID=cds-MDB8828805.1;Parent=gene-PN289_09135;Dbxref=NCBI_GP:MDB8828805.1;Name=MDB8828805.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843551.1;locus_tag=PN289_09135;product=YbaB/EbfC family nucleoid-associated protein;protein_id=MDB8828805.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 3133 4842 . - . ID=gene-PN289_09140;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PN289_09140 JAQMMZ010000031.1 Protein Homology CDS 3133 4842 . - 0 ID=cds-MDB8828806.1;Parent=gene-PN289_09140;Dbxref=NCBI_GP:MDB8828806.1;Name=MDB8828806.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845335.1;locus_tag=PN289_09140;product=DNA polymerase III subunit gamma/tau;protein_id=MDB8828806.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 4911 5174 . - . ID=gene-PN289_09145;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PN289_09145 JAQMMZ010000031.1 cmsearch SRP_RNA 4911 5174 . - . ID=rna-PN289_09145;Parent=gene-PN289_09145;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09145;product=signal recognition particle sRNA large type JAQMMZ010000031.1 cmsearch exon 4911 5174 . - . ID=exon-PN289_09145-1;Parent=rna-PN289_09145;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09145;product=signal recognition particle sRNA large type JAQMMZ010000031.1 Genbank gene 5505 6395 . - . ID=gene-PN289_09150;Name=PN289_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09150 JAQMMZ010000031.1 Protein Homology CDS 5505 6395 . - 0 ID=cds-MDB8828807.1;Parent=gene-PN289_09150;Dbxref=NCBI_GP:MDB8828807.1;Name=MDB8828807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=PN289_09150;product=MBL fold metallo-hydrolase;protein_id=MDB8828807.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 6600 7943 . - . ID=gene-PN289_09155;Name=PN289_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09155 JAQMMZ010000031.1 Protein Homology CDS 6600 7943 . - 0 ID=cds-MDB8828808.1;Parent=gene-PN289_09155;Dbxref=NCBI_GP:MDB8828808.1;Name=MDB8828808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845337.1;locus_tag=PN289_09155;product=Na+/H+ antiporter NhaC family protein;protein_id=MDB8828808.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 8230 8463 . - . ID=gene-PN289_09160;Name=PN289_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09160 JAQMMZ010000031.1 GeneMarkS-2+ CDS 8230 8463 . - 0 ID=cds-MDB8828809.1;Parent=gene-PN289_09160;Dbxref=NCBI_GP:MDB8828809.1;Name=MDB8828809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_09160;product=hypothetical protein;protein_id=MDB8828809.1;transl_table=11 JAQMMZ010000031.1 Genbank gene 8539 8626 . - . ID=gene-PN289_09165;Name=PN289_09165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09165 JAQMMZ010000031.1 tRNAscan-SE tRNA 8539 8626 . - . ID=rna-PN289_09165;Parent=gene-PN289_09165;anticodon=(pos:complement(8589..8591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09165;product=tRNA-Ser JAQMMZ010000031.1 tRNAscan-SE exon 8539 8626 . - . ID=exon-PN289_09165-1;Parent=rna-PN289_09165;anticodon=(pos:complement(8589..8591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09165;product=tRNA-Ser ##sequence-region JAQMMZ010000032.1 1 7674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000032.1 Genbank region 1 7674 . + . ID=JAQMMZ010000032.1:1..7674;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000032.1 Genbank gene 165 1142 . + . ID=gene-PN289_09170;Name=PN289_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09170 JAQMMZ010000032.1 Protein Homology CDS 165 1142 . + 0 ID=cds-MDB8828810.1;Parent=gene-PN289_09170;Dbxref=NCBI_GP:MDB8828810.1;Name=MDB8828810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845248.1;locus_tag=PN289_09170;product=AraC family transcriptional regulator;protein_id=MDB8828810.1;transl_table=11 JAQMMZ010000032.1 Genbank gene 1250 1840 . + . ID=gene-PN289_09175;Name=PN289_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09175 JAQMMZ010000032.1 Protein Homology CDS 1250 1840 . + 0 ID=cds-MDB8828811.1;Parent=gene-PN289_09175;Dbxref=NCBI_GP:MDB8828811.1;Name=MDB8828811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019115691.1;locus_tag=PN289_09175;product=MptD family putative ECF transporter S component;protein_id=MDB8828811.1;transl_table=11 JAQMMZ010000032.1 Genbank gene 1840 2514 . + . ID=gene-PN289_09180;Name=PN289_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09180 JAQMMZ010000032.1 Protein Homology CDS 1840 2514 . + 0 ID=cds-MDB8828812.1;Parent=gene-PN289_09180;Dbxref=NCBI_GP:MDB8828812.1;Name=MDB8828812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=PN289_09180;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8828812.1;transl_table=11 JAQMMZ010000032.1 Genbank gene 2511 3965 . + . ID=gene-PN289_09185;Name=PN289_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09185 JAQMMZ010000032.1 Protein Homology CDS 2511 3965 . + 0 ID=cds-MDB8828813.1;Parent=gene-PN289_09185;Dbxref=NCBI_GP:MDB8828813.1;Name=MDB8828813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845244.1;locus_tag=PN289_09185;product=ABC transporter ATP-binding protein;protein_id=MDB8828813.1;transl_table=11 JAQMMZ010000032.1 Genbank gene 3958 5697 . + . ID=gene-PN289_09190;Name=PN289_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09190 JAQMMZ010000032.1 Protein Homology CDS 3958 5697 . + 0 ID=cds-MDB8828814.1;Parent=gene-PN289_09190;Dbxref=NCBI_GP:MDB8828814.1;Name=MDB8828814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845243.1;locus_tag=PN289_09190;product=ABC transporter ATP-binding protein;protein_id=MDB8828814.1;transl_table=11 JAQMMZ010000032.1 Genbank gene 5699 7420 . + . ID=gene-PN289_09195;Name=PN289_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09195 JAQMMZ010000032.1 Protein Homology CDS 5699 7420 . + 0 ID=cds-MDB8828815.1;Parent=gene-PN289_09195;Dbxref=NCBI_GP:MDB8828815.1;Name=MDB8828815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595745.1;locus_tag=PN289_09195;product=ABC transporter ATP-binding protein;protein_id=MDB8828815.1;transl_table=11 ##sequence-region JAQMMZ010000033.1 1 7145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000033.1 Genbank region 1 7145 . + . ID=JAQMMZ010000033.1:1..7145;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000033.1 Genbank gene 212 1024 . - . ID=gene-PN289_09200;Name=PN289_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09200 JAQMMZ010000033.1 Protein Homology CDS 212 1024 . - 0 ID=cds-MDB8828816.1;Parent=gene-PN289_09200;Dbxref=NCBI_GP:MDB8828816.1;Name=MDB8828816.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595410.1;locus_tag=PN289_09200;product=undecaprenyl-diphosphate phosphatase;protein_id=MDB8828816.1;transl_table=11 JAQMMZ010000033.1 Genbank gene 1651 2103 . + . ID=gene-PN289_09205;Name=PN289_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09205 JAQMMZ010000033.1 Protein Homology CDS 1651 2103 . + 0 ID=cds-MDB8828817.1;Parent=gene-PN289_09205;Dbxref=NCBI_GP:MDB8828817.1;Name=MDB8828817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844044.1;locus_tag=PN289_09205;product=MarR family transcriptional regulator;protein_id=MDB8828817.1;transl_table=11 JAQMMZ010000033.1 Genbank gene 2250 3449 . - . ID=gene-PN289_09210;Name=PN289_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09210 JAQMMZ010000033.1 Protein Homology CDS 2250 3449 . - 0 ID=cds-MDB8828818.1;Parent=gene-PN289_09210;Dbxref=NCBI_GP:MDB8828818.1;Name=MDB8828818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595757.1;locus_tag=PN289_09210;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MDB8828818.1;transl_table=11 JAQMMZ010000033.1 Genbank gene 3863 4813 . + . ID=gene-PN289_09215;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=PN289_09215 JAQMMZ010000033.1 Protein Homology CDS 3863 4813 . + 0 ID=cds-MDB8828819.1;Parent=gene-PN289_09215;Dbxref=NCBI_GP:MDB8828819.1;Name=MDB8828819.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846061.1;locus_tag=PN289_09215;product=galactose-1-phosphate uridylyltransferase;protein_id=MDB8828819.1;transl_table=11 JAQMMZ010000033.1 Genbank gene 5068 6969 . + . ID=gene-PN289_09220;Name=PN289_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09220 JAQMMZ010000033.1 Protein Homology CDS 5068 6969 . + 0 ID=cds-MDB8828820.1;Parent=gene-PN289_09220;Dbxref=NCBI_GP:MDB8828820.1;Name=MDB8828820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846060.1;locus_tag=PN289_09220;product=glutamine synthetase;protein_id=MDB8828820.1;transl_table=11 ##sequence-region JAQMMZ010000034.1 1 5625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000034.1 Genbank region 1 5625 . + . ID=JAQMMZ010000034.1:1..5625;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000034.1 Genbank gene 456 1016 . - . ID=gene-PN289_09225;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PN289_09225 JAQMMZ010000034.1 Protein Homology CDS 456 1016 . - 0 ID=cds-MDB8828821.1;Parent=gene-PN289_09225;Dbxref=NCBI_GP:MDB8828821.1;Name=MDB8828821.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846314.1;locus_tag=PN289_09225;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=MDB8828821.1;transl_table=11 JAQMMZ010000034.1 Genbank gene 1221 2402 . + . ID=gene-PN289_09230;Name=PN289_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09230 JAQMMZ010000034.1 Protein Homology CDS 1221 2402 . + 0 ID=cds-MDB8828822.1;Parent=gene-PN289_09230;Dbxref=NCBI_GP:MDB8828822.1;Name=MDB8828822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843514.1;locus_tag=PN289_09230;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MDB8828822.1;transl_table=11 JAQMMZ010000034.1 Genbank gene 2409 3500 . + . ID=gene-PN289_09235;Name=PN289_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09235 JAQMMZ010000034.1 Protein Homology CDS 2409 3500 . + 0 ID=cds-MDB8828823.1;Parent=gene-PN289_09235;Dbxref=NCBI_GP:MDB8828823.1;Name=MDB8828823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846311.1;locus_tag=PN289_09235;product=hypothetical protein;protein_id=MDB8828823.1;transl_table=11 JAQMMZ010000034.1 Genbank pseudogene 3559 3812 . - . ID=gene-PN289_09240;Name=PN289_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_09240;pseudo=true JAQMMZ010000034.1 Protein Homology CDS 3559 3812 . - 0 ID=cds-PN289_09240;Parent=gene-PN289_09240;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167118.1;locus_tag=PN289_09240;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000034.1 Genbank pseudogene 3815 4036 . - . ID=gene-PN289_09245;Name=PN289_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_09245;pseudo=true JAQMMZ010000034.1 Protein Homology CDS 3815 4036 . - 0 ID=cds-PN289_09245;Parent=gene-PN289_09245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007516553.1;locus_tag=PN289_09245;product=DUF3847 domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000034.1 Genbank gene 4132 4557 . - . ID=gene-PN289_09250;Name=PN289_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09250 JAQMMZ010000034.1 Protein Homology CDS 4132 4557 . - 0 ID=cds-MDB8828824.1;Parent=gene-PN289_09250;Dbxref=NCBI_GP:MDB8828824.1;Name=MDB8828824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846307.1;locus_tag=PN289_09250;product=DUF3021 domain-containing protein;protein_id=MDB8828824.1;transl_table=11 JAQMMZ010000034.1 Genbank gene 4567 5007 . - . ID=gene-PN289_09255;Name=PN289_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09255 JAQMMZ010000034.1 Protein Homology CDS 4567 5007 . - 0 ID=cds-MDB8828825.1;Parent=gene-PN289_09255;Dbxref=NCBI_GP:MDB8828825.1;Name=MDB8828825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843950.1;locus_tag=PN289_09255;product=LytTR family DNA-binding domain-containing protein;protein_id=MDB8828825.1;transl_table=11 JAQMMZ010000034.1 Genbank gene 5257 5421 . - . ID=gene-PN289_09260;Name=PN289_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09260 JAQMMZ010000034.1 Protein Homology CDS 5257 5421 . - 0 ID=cds-MDB8828826.1;Parent=gene-PN289_09260;Dbxref=NCBI_GP:MDB8828826.1;Name=MDB8828826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843957.1;locus_tag=PN289_09260;product=hypothetical protein;protein_id=MDB8828826.1;transl_table=11 ##sequence-region JAQMMZ010000035.1 1 5367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000035.1 Genbank region 1 5367 . + . ID=JAQMMZ010000035.1:1..5367;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000035.1 Genbank gene 154 780 . + . ID=gene-PN289_09265;Name=PN289_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09265 JAQMMZ010000035.1 GeneMarkS-2+ CDS 154 780 . + 0 ID=cds-MDB8828827.1;Parent=gene-PN289_09265;Dbxref=NCBI_GP:MDB8828827.1;Name=MDB8828827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_09265;product=hypothetical protein;protein_id=MDB8828827.1;transl_table=11 JAQMMZ010000035.1 Genbank pseudogene 885 1469 . + . ID=gene-PN289_09270;Name=PN289_09270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_09270;pseudo=true JAQMMZ010000035.1 Protein Homology CDS 885 1469 . + 0 ID=cds-PN289_09270;Parent=gene-PN289_09270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=PN289_09270;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JAQMMZ010000035.1 Genbank gene 1632 2390 . + . ID=gene-PN289_09275;Name=PN289_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09275 JAQMMZ010000035.1 Protein Homology CDS 1632 2390 . + 0 ID=cds-MDB8828828.1;Parent=gene-PN289_09275;Dbxref=NCBI_GP:MDB8828828.1;Name=MDB8828828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006597913.1;locus_tag=PN289_09275;product=class I SAM-dependent methyltransferase;protein_id=MDB8828828.1;transl_table=11 JAQMMZ010000035.1 Genbank gene 2443 3072 . + . ID=gene-PN289_09280;Name=PN289_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09280 JAQMMZ010000035.1 Protein Homology CDS 2443 3072 . + 0 ID=cds-MDB8828829.1;Parent=gene-PN289_09280;Dbxref=NCBI_GP:MDB8828829.1;Name=MDB8828829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006861533.1;locus_tag=PN289_09280;product=L-2-amino-thiazoline-4-carboxylic acid hydrolase;protein_id=MDB8828829.1;transl_table=11 JAQMMZ010000035.1 Genbank gene 3129 3875 . + . ID=gene-PN289_09285;Name=PN289_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09285 JAQMMZ010000035.1 Protein Homology CDS 3129 3875 . + 0 ID=cds-MDB8828830.1;Parent=gene-PN289_09285;Dbxref=NCBI_GP:MDB8828830.1;Name=MDB8828830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019214905.1;locus_tag=PN289_09285;product=alpha/beta hydrolase;protein_id=MDB8828830.1;transl_table=11 JAQMMZ010000035.1 Genbank gene 3886 4392 . + . ID=gene-PN289_09290;Name=PN289_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09290 JAQMMZ010000035.1 Protein Homology CDS 3886 4392 . + 0 ID=cds-MDB8828831.1;Parent=gene-PN289_09290;Dbxref=NCBI_GP:MDB8828831.1;Name=MDB8828831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008901979.1;locus_tag=PN289_09290;product=hypothetical protein;protein_id=MDB8828831.1;transl_table=11 JAQMMZ010000035.1 Genbank gene 4556 4891 . + . ID=gene-PN289_09295;Name=PN289_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09295 JAQMMZ010000035.1 Protein Homology CDS 4556 4891 . + 0 ID=cds-MDB8828832.1;Parent=gene-PN289_09295;Dbxref=NCBI_GP:MDB8828832.1;Name=MDB8828832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022867.2;locus_tag=PN289_09295;product=helix-turn-helix domain-containing protein;protein_id=MDB8828832.1;transl_table=11 JAQMMZ010000035.1 Genbank gene 4834 5313 . + . ID=gene-PN289_09300;Name=PN289_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09300 JAQMMZ010000035.1 Protein Homology CDS 4834 5313 . + 0 ID=cds-MDB8828833.1;Parent=gene-PN289_09300;Dbxref=NCBI_GP:MDB8828833.1;Name=MDB8828833.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PN289_09300;product=IS30 family transposase;protein_id=MDB8828833.1;transl_table=11 ##sequence-region JAQMMZ010000036.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000036.1 Genbank region 1 841 . + . ID=JAQMMZ010000036.1:1..841;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 ##sequence-region JAQMMZ010000037.1 1 4149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000037.1 Genbank region 1 4149 . + . ID=JAQMMZ010000037.1:1..4149;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000037.1 Genbank gene 229 2475 . - . ID=gene-PN289_09305;Name=PN289_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09305 JAQMMZ010000037.1 Protein Homology CDS 229 2475 . - 0 ID=cds-MDB8828834.1;Parent=gene-PN289_09305;Dbxref=NCBI_GP:MDB8828834.1;Name=MDB8828834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240513.1;locus_tag=PN289_09305;product=MobA/MobL family protein;protein_id=MDB8828834.1;transl_table=11 JAQMMZ010000037.1 Genbank gene 2567 2821 . + . ID=gene-PN289_09310;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=PN289_09310 JAQMMZ010000037.1 Protein Homology CDS 2567 2821 . + 0 ID=cds-MDB8828835.1;Parent=gene-PN289_09310;Dbxref=NCBI_GP:MDB8828835.1;Name=MDB8828835.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091747.1;locus_tag=PN289_09310;product=relaxase accessory protein MobC;protein_id=MDB8828835.1;transl_table=11 JAQMMZ010000037.1 Genbank gene 3353 4045 . + . ID=gene-PN289_09315;Name=PN289_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09315 JAQMMZ010000037.1 Protein Homology CDS 3353 4045 . + 0 ID=cds-MDB8828836.1;Parent=gene-PN289_09315;Dbxref=NCBI_GP:MDB8828836.1;Name=MDB8828836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281399.1;locus_tag=PN289_09315;product=replication initiation protein;protein_id=MDB8828836.1;transl_table=11 ##sequence-region JAQMMZ010000038.1 1 2828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000038.1 Genbank region 1 2828 . + . ID=JAQMMZ010000038.1:1..2828;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000038.1 Genbank gene 1 813 . + . ID=gene-PN289_09320;Name=PN289_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09320;partial=true;start_range=.,1 JAQMMZ010000038.1 Protein Homology CDS 1 813 . + 0 ID=cds-MDB8828837.1;Parent=gene-PN289_09320;Dbxref=NCBI_GP:MDB8828837.1;Name=MDB8828837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004295514.1;locus_tag=PN289_09320;partial=true;product=mobilization protein;protein_id=MDB8828837.1;start_range=.,1;transl_table=11 JAQMMZ010000038.1 Genbank gene 1219 1842 . + . ID=gene-PN289_09325;Name=PN289_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09325 JAQMMZ010000038.1 Protein Homology CDS 1219 1842 . + 0 ID=cds-MDB8828838.1;Parent=gene-PN289_09325;Dbxref=NCBI_GP:MDB8828838.1;Name=MDB8828838.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005648621.1;locus_tag=PN289_09325;product=replication/maintenance protein RepL;protein_id=MDB8828838.1;transl_table=11 JAQMMZ010000038.1 Genbank gene 2461 2828 . + . ID=gene-PN289_09330;Name=PN289_09330;end_range=2828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09330;partial=true JAQMMZ010000038.1 Protein Homology CDS 2461 2828 . + 0 ID=cds-MDB8828839.1;Parent=gene-PN289_09330;Dbxref=NCBI_GP:MDB8828839.1;Name=MDB8828839.1;end_range=2828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004295514.1;locus_tag=PN289_09330;partial=true;product=mobilization protein;protein_id=MDB8828839.1;transl_table=11 ##sequence-region JAQMMZ010000039.1 1 2494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000039.1 Genbank region 1 2494 . + . ID=JAQMMZ010000039.1:1..2494;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000039.1 Genbank gene 628 1830 . + . ID=gene-PN289_09335;Name=PN289_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09335 JAQMMZ010000039.1 Protein Homology CDS 628 1830 . + 0 ID=cds-MDB8828840.1;Parent=gene-PN289_09335;Dbxref=NCBI_GP:MDB8828840.1;Name=MDB8828840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843538.1;locus_tag=PN289_09335;product=FprA family A-type flavoprotein;protein_id=MDB8828840.1;transl_table=11 JAQMMZ010000039.1 Genbank gene 1836 2300 . + . ID=gene-PN289_09340;Name=PN289_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09340 JAQMMZ010000039.1 Protein Homology CDS 1836 2300 . + 0 ID=cds-MDB8828841.1;Parent=gene-PN289_09340;Dbxref=NCBI_GP:MDB8828841.1;Name=MDB8828841.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843536.1;locus_tag=PN289_09340;product=dUTP diphosphatase;protein_id=MDB8828841.1;transl_table=11 ##sequence-region JAQMMZ010000003.1 1 149068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000003.1 Genbank region 1 149068 . + . ID=JAQMMZ010000003.1:1..149068;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000003.1 Genbank gene 341 1795 . - . ID=gene-PN289_02270;Name=PN289_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02270 JAQMMZ010000003.1 Protein Homology CDS 341 1795 . - 0 ID=cds-MDB8827471.1;Parent=gene-PN289_02270;Dbxref=NCBI_GP:MDB8827471.1;Name=MDB8827471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843233.1;locus_tag=PN289_02270;product=carbon starvation protein A;protein_id=MDB8827471.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 2123 3835 . - . ID=gene-PN289_02275;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PN289_02275 JAQMMZ010000003.1 Protein Homology CDS 2123 3835 . - 0 ID=cds-MDB8827472.1;Parent=gene-PN289_02275;Dbxref=NCBI_GP:MDB8827472.1;Name=MDB8827472.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595245.1;locus_tag=PN289_02275;product=arginine--tRNA ligase;protein_id=MDB8827472.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 3958 4434 . - . ID=gene-PN289_02280;Name=PN289_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02280 JAQMMZ010000003.1 Protein Homology CDS 3958 4434 . - 0 ID=cds-MDB8827473.1;Parent=gene-PN289_02280;Dbxref=NCBI_GP:MDB8827473.1;Name=MDB8827473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845439.1;locus_tag=PN289_02280;product=DUF523 domain-containing protein;protein_id=MDB8827473.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 4452 6875 . - . ID=gene-PN289_02285;Name=PN289_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02285 JAQMMZ010000003.1 Protein Homology CDS 4452 6875 . - 0 ID=cds-MDB8827474.1;Parent=gene-PN289_02285;Dbxref=NCBI_GP:MDB8827474.1;Name=MDB8827474.1;Ontology_term=GO:0006298,GO:0004519,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595246.1;locus_tag=PN289_02285;product=endonuclease MutS2;protein_id=MDB8827474.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 7083 8534 . + . ID=gene-PN289_02290;Name=PN289_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02290 JAQMMZ010000003.1 Protein Homology CDS 7083 8534 . + 0 ID=cds-MDB8827475.1;Parent=gene-PN289_02290;Dbxref=NCBI_GP:MDB8827475.1;Name=MDB8827475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845441.1;locus_tag=PN289_02290;product=aminoacyl-histidine dipeptidase;protein_id=MDB8827475.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 8947 9795 . - . ID=gene-PN289_02295;Name=PN289_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02295 JAQMMZ010000003.1 Protein Homology CDS 8947 9795 . - 0 ID=cds-MDB8827476.1;Parent=gene-PN289_02295;Dbxref=NCBI_GP:MDB8827476.1;Name=MDB8827476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843183.1;locus_tag=PN289_02295;product=DegV family protein;protein_id=MDB8827476.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 9808 10278 . - . ID=gene-PN289_02300;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PN289_02300 JAQMMZ010000003.1 Protein Homology CDS 9808 10278 . - 0 ID=cds-MDB8827477.1;Parent=gene-PN289_02300;Dbxref=NCBI_GP:MDB8827477.1;Name=MDB8827477.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003429657.1;locus_tag=PN289_02300;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=MDB8827477.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 10268 10948 . - . ID=gene-PN289_02305;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PN289_02305 JAQMMZ010000003.1 Protein Homology CDS 10268 10948 . - 0 ID=cds-MDB8827478.1;Parent=gene-PN289_02305;Dbxref=NCBI_GP:MDB8827478.1;Name=MDB8827478.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843203.1;locus_tag=PN289_02305;product=endonuclease III;protein_id=MDB8827478.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 10948 12600 . - . ID=gene-PN289_02310;Name=PN289_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02310 JAQMMZ010000003.1 Protein Homology CDS 10948 12600 . - 0 ID=cds-MDB8827479.1;Parent=gene-PN289_02310;Dbxref=NCBI_GP:MDB8827479.1;Name=MDB8827479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843274.1;locus_tag=PN289_02310;product=nucleoside kinase;protein_id=MDB8827479.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 12704 13306 . - . ID=gene-PN289_02315;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PN289_02315 JAQMMZ010000003.1 Protein Homology CDS 12704 13306 . - 0 ID=cds-MDB8827480.1;Parent=gene-PN289_02315;Dbxref=NCBI_GP:MDB8827480.1;Name=MDB8827480.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843246.1;locus_tag=PN289_02315;product=signal peptidase I;protein_id=MDB8827480.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 13340 14758 . - . ID=gene-PN289_02320;Name=PN289_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02320 JAQMMZ010000003.1 Protein Homology CDS 13340 14758 . - 0 ID=cds-MDB8827481.1;Parent=gene-PN289_02320;Dbxref=NCBI_GP:MDB8827481.1;Name=MDB8827481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845445.1;locus_tag=PN289_02320;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=MDB8827481.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 14745 15350 . - . ID=gene-PN289_02325;Name=PN289_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02325 JAQMMZ010000003.1 Protein Homology CDS 14745 15350 . - 0 ID=cds-MDB8827482.1;Parent=gene-PN289_02325;Dbxref=NCBI_GP:MDB8827482.1;Name=MDB8827482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843216.1;locus_tag=PN289_02325;product=DUF3867 family protein;protein_id=MDB8827482.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 15353 15568 . - . ID=gene-PN289_02330;Name=PN289_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02330 JAQMMZ010000003.1 GeneMarkS-2+ CDS 15353 15568 . - 0 ID=cds-MDB8827483.1;Parent=gene-PN289_02330;Dbxref=NCBI_GP:MDB8827483.1;Name=MDB8827483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02330;product=hypothetical protein;protein_id=MDB8827483.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 15513 16391 . - . ID=gene-PN289_02335;Name=PN289_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02335 JAQMMZ010000003.1 Protein Homology CDS 15513 16391 . - 0 ID=cds-MDB8827484.1;Parent=gene-PN289_02335;Dbxref=NCBI_GP:MDB8827484.1;Name=MDB8827484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017927.2;locus_tag=PN289_02335;product=DUF975 family protein;protein_id=MDB8827484.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 16481 17311 . - . ID=gene-PN289_02340;Name=PN289_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02340 JAQMMZ010000003.1 Protein Homology CDS 16481 17311 . - 0 ID=cds-MDB8827485.1;Parent=gene-PN289_02340;Dbxref=NCBI_GP:MDB8827485.1;Name=MDB8827485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843263.1;locus_tag=PN289_02340;product=carbon-nitrogen hydrolase family protein;protein_id=MDB8827485.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 17452 18876 . - . ID=gene-PN289_02345;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PN289_02345 JAQMMZ010000003.1 Protein Homology CDS 17452 18876 . - 0 ID=cds-MDB8827486.1;Parent=gene-PN289_02345;Dbxref=NCBI_GP:MDB8827486.1;Name=MDB8827486.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595251.1;locus_tag=PN289_02345;product=adenylosuccinate lyase;protein_id=MDB8827486.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 18989 20266 . - . ID=gene-PN289_02350;Name=PN289_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02350 JAQMMZ010000003.1 Protein Homology CDS 18989 20266 . - 0 ID=cds-MDB8827487.1;Parent=gene-PN289_02350;Dbxref=NCBI_GP:MDB8827487.1;Name=MDB8827487.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843211.1;locus_tag=PN289_02350;product=adenylosuccinate synthase;protein_id=MDB8827487.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 20598 22049 . - . ID=gene-PN289_02355;Name=PN289_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02355 JAQMMZ010000003.1 Protein Homology CDS 20598 22049 . - 0 ID=cds-MDB8827488.1;Parent=gene-PN289_02355;Dbxref=NCBI_GP:MDB8827488.1;Name=MDB8827488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843244.1;locus_tag=PN289_02355;product=TrkH family potassium uptake protein;protein_id=MDB8827488.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 22060 23415 . - . ID=gene-PN289_02360;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PN289_02360 JAQMMZ010000003.1 Protein Homology CDS 22060 23415 . - 0 ID=cds-MDB8827489.1;Parent=gene-PN289_02360;Dbxref=NCBI_GP:MDB8827489.1;Name=MDB8827489.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845452.1;locus_tag=PN289_02360;product=Trk system potassium transporter TrkA;protein_id=MDB8827489.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 23665 24384 . + . ID=gene-PN289_02365;Name=PN289_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02365 JAQMMZ010000003.1 Protein Homology CDS 23665 24384 . + 0 ID=cds-MDB8827490.1;Parent=gene-PN289_02365;Dbxref=NCBI_GP:MDB8827490.1;Name=MDB8827490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845453.1;locus_tag=PN289_02365;product=PepSY domain-containing protein;protein_id=MDB8827490.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 24463 25521 . - . ID=gene-PN289_02370;Name=PN289_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02370 JAQMMZ010000003.1 Protein Homology CDS 24463 25521 . - 0 ID=cds-MDB8827491.1;Parent=gene-PN289_02370;Dbxref=NCBI_GP:MDB8827491.1;Name=MDB8827491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843295.1;locus_tag=PN289_02370;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=MDB8827491.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 25620 26660 . - . ID=gene-PN289_02375;Name=PN289_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02375 JAQMMZ010000003.1 Protein Homology CDS 25620 26660 . - 0 ID=cds-MDB8827492.1;Parent=gene-PN289_02375;Dbxref=NCBI_GP:MDB8827492.1;Name=MDB8827492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595253.1;locus_tag=PN289_02375;product=zinc-binding dehydrogenase;protein_id=MDB8827492.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 26849 28123 . - . ID=gene-PN289_02380;Name=PN289_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02380 JAQMMZ010000003.1 Protein Homology CDS 26849 28123 . - 0 ID=cds-MDB8827493.1;Parent=gene-PN289_02380;Dbxref=NCBI_GP:MDB8827493.1;Name=MDB8827493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843259.1;locus_tag=PN289_02380;product=PTS galactitol transporter subunit IIC;protein_id=MDB8827493.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 28197 28475 . - . ID=gene-PN289_02385;Name=PN289_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02385 JAQMMZ010000003.1 Protein Homology CDS 28197 28475 . - 0 ID=cds-MDB8827494.1;Parent=gene-PN289_02385;Dbxref=NCBI_GP:MDB8827494.1;Name=MDB8827494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843240.1;locus_tag=PN289_02385;product=PTS sugar transporter subunit IIB;protein_id=MDB8827494.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 28494 28952 . - . ID=gene-PN289_02390;Name=PN289_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02390 JAQMMZ010000003.1 Protein Homology CDS 28494 28952 . - 0 ID=cds-MDB8827495.1;Parent=gene-PN289_02390;Dbxref=NCBI_GP:MDB8827495.1;Name=MDB8827495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843207.1;locus_tag=PN289_02390;product=PTS sugar transporter subunit IIA;protein_id=MDB8827495.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 29199 32120 . - . ID=gene-PN289_02395;Name=PN289_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02395 JAQMMZ010000003.1 Protein Homology CDS 29199 32120 . - 0 ID=cds-MDB8827496.1;Parent=gene-PN289_02395;Dbxref=NCBI_GP:MDB8827496.1;Name=MDB8827496.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167090.1;locus_tag=PN289_02395;product=sigma 54-interacting transcriptional regulator;protein_id=MDB8827496.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 32222 35308 . - . ID=gene-PN289_02400;Name=PN289_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02400 JAQMMZ010000003.1 Protein Homology CDS 32222 35308 . - 0 ID=cds-MDB8827497.1;Parent=gene-PN289_02400;Dbxref=NCBI_GP:MDB8827497.1;Name=MDB8827497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845461.1;locus_tag=PN289_02400;product=ABC transporter permease;protein_id=MDB8827497.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 35319 36020 . - . ID=gene-PN289_02405;Name=PN289_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02405 JAQMMZ010000003.1 Protein Homology CDS 35319 36020 . - 0 ID=cds-MDB8827498.1;Parent=gene-PN289_02405;Dbxref=NCBI_GP:MDB8827498.1;Name=MDB8827498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003452930.1;locus_tag=PN289_02405;product=ABC transporter ATP-binding protein;protein_id=MDB8827498.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 36178 36924 . - . ID=gene-PN289_02410;Name=PN289_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02410 JAQMMZ010000003.1 Protein Homology CDS 36178 36924 . - 0 ID=cds-MDB8827499.1;Parent=gene-PN289_02410;Dbxref=NCBI_GP:MDB8827499.1;Name=MDB8827499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845143.1;locus_tag=PN289_02410;product=nucleotidyltransferase domain-containing protein;protein_id=MDB8827499.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 37119 37409 . - . ID=gene-PN289_02415;Name=PN289_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02415 JAQMMZ010000003.1 GeneMarkS-2+ CDS 37119 37409 . - 0 ID=cds-MDB8827500.1;Parent=gene-PN289_02415;Dbxref=NCBI_GP:MDB8827500.1;Name=MDB8827500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02415;product=hypothetical protein;protein_id=MDB8827500.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 37489 38421 . - . ID=gene-PN289_02420;Name=PN289_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02420 JAQMMZ010000003.1 Protein Homology CDS 37489 38421 . - 0 ID=cds-MDB8827501.1;Parent=gene-PN289_02420;Dbxref=NCBI_GP:MDB8827501.1;Name=MDB8827501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845144.1;locus_tag=PN289_02420;product=sel1 repeat family protein;protein_id=MDB8827501.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 38418 38825 . - . ID=gene-PN289_02425;Name=PN289_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02425 JAQMMZ010000003.1 Protein Homology CDS 38418 38825 . - 0 ID=cds-MDB8827502.1;Parent=gene-PN289_02425;Dbxref=NCBI_GP:MDB8827502.1;Name=MDB8827502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595530.1;locus_tag=PN289_02425;product=ORF6N domain-containing protein;protein_id=MDB8827502.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 38977 39156 . + . ID=gene-PN289_02430;Name=PN289_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02430 JAQMMZ010000003.1 Protein Homology CDS 38977 39156 . + 0 ID=cds-MDB8827503.1;Parent=gene-PN289_02430;Dbxref=NCBI_GP:MDB8827503.1;Name=MDB8827503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595509.1;locus_tag=PN289_02430;product=hypothetical protein;protein_id=MDB8827503.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 39266 40555 . - . ID=gene-PN289_02435;Name=PN289_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02435 JAQMMZ010000003.1 Protein Homology CDS 39266 40555 . - 0 ID=cds-MDB8827504.1;Parent=gene-PN289_02435;Dbxref=NCBI_GP:MDB8827504.1;Name=MDB8827504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845148.1;locus_tag=PN289_02435;product=DUF2254 domain-containing protein;protein_id=MDB8827504.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 40759 42294 . - . ID=gene-PN289_02440;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PN289_02440 JAQMMZ010000003.1 Protein Homology CDS 40759 42294 . - 0 ID=cds-MDB8827505.1;Parent=gene-PN289_02440;Dbxref=NCBI_GP:MDB8827505.1;Name=MDB8827505.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007789015.1;locus_tag=PN289_02440;product=glutamine-hydrolyzing GMP synthase;protein_id=MDB8827505.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 42640 43269 . - . ID=gene-PN289_02445;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PN289_02445 JAQMMZ010000003.1 Protein Homology CDS 42640 43269 . - 0 ID=cds-MDB8827506.1;Parent=gene-PN289_02445;Dbxref=NCBI_GP:MDB8827506.1;Name=MDB8827506.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003437840.1;locus_tag=PN289_02445;product=uracil phosphoribosyltransferase;protein_id=MDB8827506.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 43314 43760 . - . ID=gene-PN289_02450;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=PN289_02450 JAQMMZ010000003.1 Protein Homology CDS 43314 43760 . - 0 ID=cds-MDB8827507.1;Parent=gene-PN289_02450;Dbxref=NCBI_GP:MDB8827507.1;Name=MDB8827507.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595527.1;locus_tag=PN289_02450;product=ribose 5-phosphate isomerase B;protein_id=MDB8827507.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 43782 44831 . - . ID=gene-PN289_02455;Name=PN289_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02455 JAQMMZ010000003.1 Protein Homology CDS 43782 44831 . - 0 ID=cds-MDB8827508.1;Parent=gene-PN289_02455;Dbxref=NCBI_GP:MDB8827508.1;Name=MDB8827508.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167142.1;locus_tag=PN289_02455;product=L-threonylcarbamoyladenylate synthase;protein_id=MDB8827508.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 44853 45917 . - . ID=gene-PN289_02460;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PN289_02460 JAQMMZ010000003.1 Protein Homology CDS 44853 45917 . - 0 ID=cds-MDB8827509.1;Parent=gene-PN289_02460;Dbxref=NCBI_GP:MDB8827509.1;Name=MDB8827509.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421389.1;locus_tag=PN289_02460;product=peptide chain release factor 1;protein_id=MDB8827509.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 46257 46844 . - . ID=gene-PN289_02465;Name=PN289_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02465 JAQMMZ010000003.1 GeneMarkS-2+ CDS 46257 46844 . - 0 ID=cds-MDB8827510.1;Parent=gene-PN289_02465;Dbxref=NCBI_GP:MDB8827510.1;Name=MDB8827510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02465;product=toxin regulator;protein_id=MDB8827510.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 46938 47081 . - . ID=gene-PN289_02470;Name=PN289_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02470 JAQMMZ010000003.1 Protein Homology CDS 46938 47081 . - 0 ID=cds-MDB8827511.1;Parent=gene-PN289_02470;Dbxref=NCBI_GP:MDB8827511.1;Name=MDB8827511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024637.2;locus_tag=PN289_02470;product=zinc-ribbon domain-containing protein;protein_id=MDB8827511.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 47292 47870 . - . ID=gene-PN289_02475;Name=PN289_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02475 JAQMMZ010000003.1 Protein Homology CDS 47292 47870 . - 0 ID=cds-MDB8827512.1;Parent=gene-PN289_02475;Dbxref=NCBI_GP:MDB8827512.1;Name=MDB8827512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845157.1;locus_tag=PN289_02475;product=hypothetical protein;protein_id=MDB8827512.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 47889 48146 . - . ID=gene-PN289_02480;Name=PN289_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02480 JAQMMZ010000003.1 Protein Homology CDS 47889 48146 . - 0 ID=cds-MDB8827513.1;Parent=gene-PN289_02480;Dbxref=NCBI_GP:MDB8827513.1;Name=MDB8827513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845160.1;locus_tag=PN289_02480;product=F0F1 ATP synthase subunit epsilon;protein_id=MDB8827513.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 48146 49543 . - . ID=gene-PN289_02485;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PN289_02485 JAQMMZ010000003.1 Protein Homology CDS 48146 49543 . - 0 ID=cds-MDB8827514.1;Parent=gene-PN289_02485;Dbxref=NCBI_GP:MDB8827514.1;Name=MDB8827514.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845162.1;locus_tag=PN289_02485;product=F0F1 ATP synthase subunit beta;protein_id=MDB8827514.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 49554 50552 . - . ID=gene-PN289_02490;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PN289_02490 JAQMMZ010000003.1 Protein Homology CDS 49554 50552 . - 0 ID=cds-MDB8827515.1;Parent=gene-PN289_02490;Dbxref=NCBI_GP:MDB8827515.1;Name=MDB8827515.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845163.1;locus_tag=PN289_02490;product=ATP synthase F1 subunit gamma;protein_id=MDB8827515.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 50581 52077 . - . ID=gene-PN289_02495;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PN289_02495 JAQMMZ010000003.1 Protein Homology CDS 50581 52077 . - 0 ID=cds-MDB8827516.1;Parent=gene-PN289_02495;Dbxref=NCBI_GP:MDB8827516.1;Name=MDB8827516.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845166.1;locus_tag=PN289_02495;product=F0F1 ATP synthase subunit alpha;protein_id=MDB8827516.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 52094 52636 . - . ID=gene-PN289_02500;Name=PN289_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02500 JAQMMZ010000003.1 Protein Homology CDS 52094 52636 . - 0 ID=cds-MDB8827517.1;Parent=gene-PN289_02500;Dbxref=NCBI_GP:MDB8827517.1;Name=MDB8827517.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845168.1;locus_tag=PN289_02500;product=F0F1 ATP synthase subunit delta;protein_id=MDB8827517.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 52636 53136 . - . ID=gene-PN289_02505;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PN289_02505 JAQMMZ010000003.1 Protein Homology CDS 52636 53136 . - 0 ID=cds-MDB8827518.1;Parent=gene-PN289_02505;Dbxref=NCBI_GP:MDB8827518.1;Name=MDB8827518.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167096.1;locus_tag=PN289_02505;product=F0F1 ATP synthase subunit B;protein_id=MDB8827518.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 53179 53442 . - . ID=gene-PN289_02510;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PN289_02510 JAQMMZ010000003.1 Protein Homology CDS 53179 53442 . - 0 ID=cds-MDB8827519.1;Parent=gene-PN289_02510;Dbxref=NCBI_GP:MDB8827519.1;Name=MDB8827519.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167126.1;locus_tag=PN289_02510;product=ATP synthase F0 subunit C;protein_id=MDB8827519.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 53560 54264 . - . ID=gene-PN289_02515;Name=PN289_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02515 JAQMMZ010000003.1 Protein Homology CDS 53560 54264 . - 0 ID=cds-MDB8827520.1;Parent=gene-PN289_02515;Dbxref=NCBI_GP:MDB8827520.1;Name=MDB8827520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003437836.1;locus_tag=PN289_02515;product=F0F1 ATP synthase subunit A;protein_id=MDB8827520.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 54281 54670 . - . ID=gene-PN289_02520;Name=PN289_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02520 JAQMMZ010000003.1 Protein Homology CDS 54281 54670 . - 0 ID=cds-MDB8827521.1;Parent=gene-PN289_02520;Dbxref=NCBI_GP:MDB8827521.1;Name=MDB8827521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845173.1;locus_tag=PN289_02520;product=ATP synthase subunit I;protein_id=MDB8827521.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 54663 54896 . - . ID=gene-PN289_02525;Name=PN289_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02525 JAQMMZ010000003.1 Protein Homology CDS 54663 54896 . - 0 ID=cds-MDB8827522.1;Parent=gene-PN289_02525;Dbxref=NCBI_GP:MDB8827522.1;Name=MDB8827522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845174.1;locus_tag=PN289_02525;product=AtpZ/AtpI family protein;protein_id=MDB8827522.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 55071 56099 . - . ID=gene-PN289_02530;Name=PN289_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02530 JAQMMZ010000003.1 Protein Homology CDS 55071 56099 . - 0 ID=cds-MDB8827523.1;Parent=gene-PN289_02530;Dbxref=NCBI_GP:MDB8827523.1;Name=MDB8827523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845175.1;locus_tag=PN289_02530;product=YeiH family protein;protein_id=MDB8827523.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 56344 57966 . - . ID=gene-PN289_02535;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PN289_02535 JAQMMZ010000003.1 Protein Homology CDS 56344 57966 . - 0 ID=cds-MDB8827524.1;Parent=gene-PN289_02535;Dbxref=NCBI_GP:MDB8827524.1;Name=MDB8827524.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167116.1;locus_tag=PN289_02535;product=chaperonin GroEL;protein_id=MDB8827524.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 57986 58270 . - . ID=gene-PN289_02540;Name=PN289_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02540 JAQMMZ010000003.1 Protein Homology CDS 57986 58270 . - 0 ID=cds-MDB8827525.1;Parent=gene-PN289_02540;Dbxref=NCBI_GP:MDB8827525.1;Name=MDB8827525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845177.1;locus_tag=PN289_02540;product=co-chaperone GroES;protein_id=MDB8827525.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 58349 59830 . - . ID=gene-PN289_02545;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PN289_02545 JAQMMZ010000003.1 Protein Homology CDS 58349 59830 . - 0 ID=cds-MDB8827526.1;Parent=gene-PN289_02545;Dbxref=NCBI_GP:MDB8827526.1;Name=MDB8827526.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845178.1;locus_tag=PN289_02545;product=cardiolipin synthase;protein_id=MDB8827526.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 59839 60729 . - . ID=gene-PN289_02550;Name=PN289_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02550 JAQMMZ010000003.1 Protein Homology CDS 59839 60729 . - 0 ID=cds-MDB8827527.1;Parent=gene-PN289_02550;Dbxref=NCBI_GP:MDB8827527.1;Name=MDB8827527.1;Ontology_term=GO:0006289,GO:0003684,GO:0008534;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167139.1;locus_tag=PN289_02550;product=DNA glycosylase;protein_id=MDB8827527.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 60802 61194 . - . ID=gene-PN289_02555;Name=PN289_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02555 JAQMMZ010000003.1 Protein Homology CDS 60802 61194 . - 0 ID=cds-MDB8827528.1;Parent=gene-PN289_02555;Dbxref=NCBI_GP:MDB8827528.1;Name=MDB8827528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167099.1;locus_tag=PN289_02555;product=Asp23/Gls24 family envelope stress response protein;protein_id=MDB8827528.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 61284 61850 . - . ID=gene-PN289_02560;Name=PN289_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02560 JAQMMZ010000003.1 Protein Homology CDS 61284 61850 . - 0 ID=cds-MDB8827529.1;Parent=gene-PN289_02560;Dbxref=NCBI_GP:MDB8827529.1;Name=MDB8827529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595525.1;locus_tag=PN289_02560;product=DUF2273 domain-containing protein;protein_id=MDB8827529.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 61863 62474 . - . ID=gene-PN289_02565;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=PN289_02565 JAQMMZ010000003.1 Protein Homology CDS 61863 62474 . - 0 ID=cds-MDB8827530.1;Parent=gene-PN289_02565;Dbxref=NCBI_GP:MDB8827530.1;Name=MDB8827530.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167094.1;locus_tag=PN289_02565;product=alkaline shock response membrane anchor protein AmaP;protein_id=MDB8827530.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 62658 63239 . - . ID=gene-PN289_02570;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PN289_02570 JAQMMZ010000003.1 Protein Homology CDS 62658 63239 . - 0 ID=cds-MDB8827531.1;Parent=gene-PN289_02570;Dbxref=NCBI_GP:MDB8827531.1;Name=MDB8827531.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167083.1;locus_tag=PN289_02570;product=orotate phosphoribosyltransferase;protein_id=MDB8827531.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 63364 64266 . - . ID=gene-PN289_02575;Name=PN289_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02575 JAQMMZ010000003.1 Protein Homology CDS 63364 64266 . - 0 ID=cds-MDB8827532.1;Parent=gene-PN289_02575;Dbxref=NCBI_GP:MDB8827532.1;Name=MDB8827532.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845186.1;locus_tag=PN289_02575;product=dihydroorotate dehydrogenase;protein_id=MDB8827532.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 64266 64955 . - . ID=gene-PN289_02580;Name=PN289_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02580 JAQMMZ010000003.1 Protein Homology CDS 64266 64955 . - 0 ID=cds-MDB8827533.1;Parent=gene-PN289_02580;Dbxref=NCBI_GP:MDB8827533.1;Name=MDB8827533.1;Ontology_term=GO:0006221,GO:0016491,GO:0050660,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845187.1;locus_tag=PN289_02580;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=MDB8827533.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 64955 65878 . - . ID=gene-PN289_02585;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PN289_02585 JAQMMZ010000003.1 Protein Homology CDS 64955 65878 . - 0 ID=cds-MDB8827534.1;Parent=gene-PN289_02585;Dbxref=NCBI_GP:MDB8827534.1;Name=MDB8827534.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167120.1;locus_tag=PN289_02585;product=aspartate carbamoyltransferase;protein_id=MDB8827534.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 66072 66215 . - . ID=gene-PN289_02590;Name=PN289_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02590 JAQMMZ010000003.1 Protein Homology CDS 66072 66215 . - 0 ID=cds-MDB8827535.1;Parent=gene-PN289_02590;Dbxref=NCBI_GP:MDB8827535.1;Name=MDB8827535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845189.1;locus_tag=PN289_02590;product=FeoB-associated Cys-rich membrane protein;protein_id=MDB8827535.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 66391 68550 . - . ID=gene-PN289_02595;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PN289_02595 JAQMMZ010000003.1 Protein Homology CDS 66391 68550 . - 0 ID=cds-MDB8827536.1;Parent=gene-PN289_02595;Dbxref=NCBI_GP:MDB8827536.1;Name=MDB8827536.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845190.1;locus_tag=PN289_02595;product=ferrous iron transport protein B;protein_id=MDB8827536.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 68799 69032 . - . ID=gene-PN289_02600;Name=PN289_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02600 JAQMMZ010000003.1 Protein Homology CDS 68799 69032 . - 0 ID=cds-MDB8827537.1;Parent=gene-PN289_02600;Dbxref=NCBI_GP:MDB8827537.1;Name=MDB8827537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788880.1;locus_tag=PN289_02600;product=ferrous iron transport protein A;protein_id=MDB8827537.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 69215 69433 . - . ID=gene-PN289_02605;Name=PN289_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02605 JAQMMZ010000003.1 Protein Homology CDS 69215 69433 . - 0 ID=cds-MDB8827538.1;Parent=gene-PN289_02605;Dbxref=NCBI_GP:MDB8827538.1;Name=MDB8827538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167114.1;locus_tag=PN289_02605;product=FeoA family protein;protein_id=MDB8827538.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 69858 71111 . - . ID=gene-PN289_02610;Name=gluD;gbkey=Gene;gene=gluD;gene_biotype=protein_coding;locus_tag=PN289_02610 JAQMMZ010000003.1 Protein Homology CDS 69858 71111 . - 0 ID=cds-MDB8827539.1;Parent=gene-PN289_02610;Dbxref=NCBI_GP:MDB8827539.1;Name=MDB8827539.1;gbkey=CDS;gene=gluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012342769.1;locus_tag=PN289_02610;product=NAD-specific glutamate dehydrogenase;protein_id=MDB8827539.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 71639 71806 . - . ID=gene-PN289_02615;Name=PN289_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02615 JAQMMZ010000003.1 Protein Homology CDS 71639 71806 . - 0 ID=cds-MDB8827540.1;Parent=gene-PN289_02615;Dbxref=NCBI_GP:MDB8827540.1;Name=MDB8827540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009525956.1;locus_tag=PN289_02615;product=4Fe-4S binding protein;protein_id=MDB8827540.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 72233 72511 . + . ID=gene-PN289_02620;Name=PN289_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02620 JAQMMZ010000003.1 Protein Homology CDS 72233 72511 . + 0 ID=cds-MDB8827541.1;Parent=gene-PN289_02620;Dbxref=NCBI_GP:MDB8827541.1;Name=MDB8827541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845772.1;locus_tag=PN289_02620;product=HU family DNA-binding protein;protein_id=MDB8827541.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 72681 72920 . + . ID=gene-PN289_02625;Name=PN289_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02625 JAQMMZ010000003.1 Protein Homology CDS 72681 72920 . + 0 ID=cds-MDB8827542.1;Parent=gene-PN289_02625;Dbxref=NCBI_GP:MDB8827542.1;Name=MDB8827542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167137.1;locus_tag=PN289_02625;product=RNA-binding S4 domain-containing protein;protein_id=MDB8827542.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 73050 74585 . + . ID=gene-PN289_02630;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PN289_02630 JAQMMZ010000003.1 Protein Homology CDS 73050 74585 . + 0 ID=cds-MDB8827543.1;Parent=gene-PN289_02630;Dbxref=NCBI_GP:MDB8827543.1;Name=MDB8827543.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845769.1;locus_tag=PN289_02630;product=transcription termination factor Rho;protein_id=MDB8827543.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 74743 75381 . - . ID=gene-PN289_02635;Name=PN289_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02635 JAQMMZ010000003.1 Protein Homology CDS 74743 75381 . - 0 ID=cds-MDB8827544.1;Parent=gene-PN289_02635;Dbxref=NCBI_GP:MDB8827544.1;Name=MDB8827544.1;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845768.1;locus_tag=PN289_02635;product=redox-sensing transcriptional repressor Rex;protein_id=MDB8827544.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 75570 77498 . - . ID=gene-PN289_02640;Name=PN289_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02640 JAQMMZ010000003.1 Protein Homology CDS 75570 77498 . - 0 ID=cds-MDB8827545.1;Parent=gene-PN289_02640;Dbxref=NCBI_GP:MDB8827545.1;Name=MDB8827545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845767.1;locus_tag=PN289_02640;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=MDB8827545.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 77510 78529 . - . ID=gene-PN289_02645;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PN289_02645 JAQMMZ010000003.1 Protein Homology CDS 77510 78529 . - 0 ID=cds-MDB8827546.1;Parent=gene-PN289_02645;Dbxref=NCBI_GP:MDB8827546.1;Name=MDB8827546.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845766.1;locus_tag=PN289_02645;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MDB8827546.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 78529 78975 . - . ID=gene-PN289_02650;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PN289_02650 JAQMMZ010000003.1 Protein Homology CDS 78529 78975 . - 0 ID=cds-MDB8827547.1;Parent=gene-PN289_02650;Dbxref=NCBI_GP:MDB8827547.1;Name=MDB8827547.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845761.1;locus_tag=PN289_02650;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=MDB8827547.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 78965 79696 . - . ID=gene-PN289_02655;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PN289_02655 JAQMMZ010000003.1 Protein Homology CDS 78965 79696 . - 0 ID=cds-MDB8827548.1;Parent=gene-PN289_02655;Dbxref=NCBI_GP:MDB8827548.1;Name=MDB8827548.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845760.1;locus_tag=PN289_02655;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MDB8827548.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 79693 80151 . - . ID=gene-PN289_02660;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PN289_02660 JAQMMZ010000003.1 Protein Homology CDS 79693 80151 . - 0 ID=cds-MDB8827549.1;Parent=gene-PN289_02660;Dbxref=NCBI_GP:MDB8827549.1;Name=MDB8827549.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167125.1;locus_tag=PN289_02660;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=MDB8827549.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 80470 81465 . + . ID=gene-PN289_02665;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PN289_02665 JAQMMZ010000003.1 Protein Homology CDS 80470 81465 . + 0 ID=cds-MDB8827550.1;Parent=gene-PN289_02665;Dbxref=NCBI_GP:MDB8827550.1;Name=MDB8827550.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167080.1;locus_tag=PN289_02665;product=biotin synthase BioB;protein_id=MDB8827550.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 81595 82509 . - . ID=gene-PN289_02670;Name=PN289_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02670 JAQMMZ010000003.1 Protein Homology CDS 81595 82509 . - 0 ID=cds-MDB8827551.1;Parent=gene-PN289_02670;Dbxref=NCBI_GP:MDB8827551.1;Name=MDB8827551.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845756.1;locus_tag=PN289_02670;product=bifunctional enoyl-CoA hydratase/phosphate acetyltransferase;protein_id=MDB8827551.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 82899 83510 . - . ID=gene-PN289_02675;Name=PN289_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02675 JAQMMZ010000003.1 Protein Homology CDS 82899 83510 . - 0 ID=cds-MDB8827552.1;Parent=gene-PN289_02675;Dbxref=NCBI_GP:MDB8827552.1;Name=MDB8827552.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167093.1;locus_tag=PN289_02675;product=ECF transporter S component;protein_id=MDB8827552.1;transl_table=11 JAQMMZ010000003.1 cmsearch riboswitch 83586 83702 . - . ID=id-JAQMMZ010000003.1:83586..83702;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000003.1 Genbank gene 83735 86380 . - . ID=gene-PN289_02680;Name=PN289_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02680 JAQMMZ010000003.1 Protein Homology CDS 83735 86380 . - 0 ID=cds-MDB8827553.1;Parent=gene-PN289_02680;Dbxref=NCBI_GP:MDB8827553.1;Name=MDB8827553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167136.1;locus_tag=PN289_02680;product=YfhO family protein;protein_id=MDB8827553.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 86386 87315 . - . ID=gene-PN289_02685;Name=PN289_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02685 JAQMMZ010000003.1 Protein Homology CDS 86386 87315 . - 0 ID=cds-MDB8827554.1;Parent=gene-PN289_02685;Dbxref=NCBI_GP:MDB8827554.1;Name=MDB8827554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595422.1;locus_tag=PN289_02685;product=glycosyltransferase family 2 protein;protein_id=MDB8827554.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 87474 89624 . - . ID=gene-PN289_02690;Name=PN289_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02690 JAQMMZ010000003.1 Protein Homology CDS 87474 89624 . - 0 ID=cds-MDB8827555.1;Parent=gene-PN289_02690;Dbxref=NCBI_GP:MDB8827555.1;Name=MDB8827555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846629.1;locus_tag=PN289_02690;product=Tex family protein;protein_id=MDB8827555.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 89641 90757 . - . ID=gene-PN289_02695;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PN289_02695 JAQMMZ010000003.1 Protein Homology CDS 90683 90757 . - 0 ID=cds-MDB8827556.1;Parent=gene-PN289_02695;Dbxref=NCBI_GP:MDB8827556.1;Name=MDB8827556.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154645703.1;locus_tag=PN289_02695;product=peptide chain release factor 2;protein_id=MDB8827556.1;transl_table=11 JAQMMZ010000003.1 Protein Homology CDS 89641 90681 . - 0 ID=cds-MDB8827556.1;Parent=gene-PN289_02695;Dbxref=NCBI_GP:MDB8827556.1;Name=MDB8827556.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154645703.1;locus_tag=PN289_02695;product=peptide chain release factor 2;protein_id=MDB8827556.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 90866 93550 . - . ID=gene-PN289_02700;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PN289_02700 JAQMMZ010000003.1 Protein Homology CDS 90866 93550 . - 0 ID=cds-MDB8827557.1;Parent=gene-PN289_02700;Dbxref=NCBI_GP:MDB8827557.1;Name=MDB8827557.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595423.1;locus_tag=PN289_02700;product=preprotein translocase subunit SecA;protein_id=MDB8827557.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 94045 95889 . - . ID=gene-PN289_02705;Name=PN289_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02705 JAQMMZ010000003.1 Protein Homology CDS 94045 95889 . - 0 ID=cds-MDB8827558.1;Parent=gene-PN289_02705;Dbxref=NCBI_GP:MDB8827558.1;Name=MDB8827558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846632.1;locus_tag=PN289_02705;product=cell wall-binding repeat-containing protein;protein_id=MDB8827558.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 96193 96825 . - . ID=gene-PN289_02710;Name=PN289_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02710 JAQMMZ010000003.1 Protein Homology CDS 96193 96825 . - 0 ID=cds-MDB8827559.1;Parent=gene-PN289_02710;Dbxref=NCBI_GP:MDB8827559.1;Name=MDB8827559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846633.1;locus_tag=PN289_02710;product=prepilin peptidase;protein_id=MDB8827559.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 96819 97886 . - . ID=gene-PN289_02715;Name=PN289_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02715 JAQMMZ010000003.1 Protein Homology CDS 96819 97886 . - 0 ID=cds-MDB8827560.1;Parent=gene-PN289_02715;Dbxref=NCBI_GP:MDB8827560.1;Name=MDB8827560.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846635.1;locus_tag=PN289_02715;product=PilT/PilU family type 4a pilus ATPase;protein_id=MDB8827560.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 98031 98198 . - . ID=gene-PN289_02720;Name=PN289_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02720 JAQMMZ010000003.1 GeneMarkS-2+ CDS 98031 98198 . - 0 ID=cds-MDB8827561.1;Parent=gene-PN289_02720;Dbxref=NCBI_GP:MDB8827561.1;Name=MDB8827561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02720;product=ABC transporter ATP-binding protein/permease;protein_id=MDB8827561.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 98182 98862 . - . ID=gene-PN289_02725;Name=PN289_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02725 JAQMMZ010000003.1 Protein Homology CDS 98182 98862 . - 0 ID=cds-MDB8827562.1;Parent=gene-PN289_02725;Dbxref=NCBI_GP:MDB8827562.1;Name=MDB8827562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167118.1;locus_tag=PN289_02725;product=ABC transporter ATP-binding protein;protein_id=MDB8827562.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 98888 101428 . - . ID=gene-PN289_02730;Name=PN289_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02730 JAQMMZ010000003.1 Protein Homology CDS 98888 101428 . - 0 ID=cds-MDB8827563.1;Parent=gene-PN289_02730;Dbxref=NCBI_GP:MDB8827563.1;Name=MDB8827563.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167108.1;locus_tag=PN289_02730;product=FtsX-like permease family protein;protein_id=MDB8827563.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 101406 101582 . - . ID=gene-PN289_02735;Name=PN289_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02735 JAQMMZ010000003.1 Protein Homology CDS 101406 101582 . - 0 ID=cds-MDB8827564.1;Parent=gene-PN289_02735;Dbxref=NCBI_GP:MDB8827564.1;Name=MDB8827564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846641.1;locus_tag=PN289_02735;product=hypothetical protein;protein_id=MDB8827564.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 101960 102508 . - . ID=gene-PN289_02740;Name=PN289_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02740 JAQMMZ010000003.1 Protein Homology CDS 101960 102508 . - 0 ID=cds-MDB8827565.1;Parent=gene-PN289_02740;Dbxref=NCBI_GP:MDB8827565.1;Name=MDB8827565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846643.1;locus_tag=PN289_02740;product=Mpv17/PMP22 family protein;protein_id=MDB8827565.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 102689 103645 . - . ID=gene-PN289_02745;Name=PN289_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02745 JAQMMZ010000003.1 Protein Homology CDS 102689 103645 . - 0 ID=cds-MDB8827566.1;Parent=gene-PN289_02745;Dbxref=NCBI_GP:MDB8827566.1;Name=MDB8827566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421448.1;locus_tag=PN289_02745;product=ribose-phosphate pyrophosphokinase;protein_id=MDB8827566.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 103789 105165 . - . ID=gene-PN289_02750;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PN289_02750 JAQMMZ010000003.1 Protein Homology CDS 103789 105165 . - 0 ID=cds-MDB8827567.1;Parent=gene-PN289_02750;Dbxref=NCBI_GP:MDB8827567.1;Name=MDB8827567.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167091.1;locus_tag=PN289_02750;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=MDB8827567.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 105212 105868 . - . ID=gene-PN289_02755;Name=PN289_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02755 JAQMMZ010000003.1 Protein Homology CDS 105212 105868 . - 0 ID=cds-MDB8827568.1;Parent=gene-PN289_02755;Dbxref=NCBI_GP:MDB8827568.1;Name=MDB8827568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846646.1;locus_tag=PN289_02755;product=C39 family peptidase;protein_id=MDB8827568.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 105865 106713 . - . ID=gene-PN289_02760;Name=PN289_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02760 JAQMMZ010000003.1 Protein Homology CDS 105865 106713 . - 0 ID=cds-MDB8827569.1;Parent=gene-PN289_02760;Dbxref=NCBI_GP:MDB8827569.1;Name=MDB8827569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846647.1;locus_tag=PN289_02760;product=hypothetical protein;protein_id=MDB8827569.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 106707 107588 . - . ID=gene-PN289_02765;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PN289_02765 JAQMMZ010000003.1 Protein Homology CDS 106707 107588 . - 0 ID=cds-MDB8827570.1;Parent=gene-PN289_02765;Dbxref=NCBI_GP:MDB8827570.1;Name=MDB8827570.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846648.1;locus_tag=PN289_02765;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=MDB8827570.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 107628 108158 . - . ID=gene-PN289_02770;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=PN289_02770 JAQMMZ010000003.1 Protein Homology CDS 107628 108158 . - 0 ID=cds-MDB8827571.1;Parent=gene-PN289_02770;Dbxref=NCBI_GP:MDB8827571.1;Name=MDB8827571.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846650.1;locus_tag=PN289_02770;product=ribonuclease M5;protein_id=MDB8827571.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 108385 109539 . - . ID=gene-PN289_02775;Name=PN289_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02775 JAQMMZ010000003.1 Protein Homology CDS 108385 109539 . - 0 ID=cds-MDB8827572.1;Parent=gene-PN289_02775;Dbxref=NCBI_GP:MDB8827572.1;Name=MDB8827572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846651.1;locus_tag=PN289_02775;product=trypsin-like peptidase domain-containing protein;protein_id=MDB8827572.1;transl_table=11 JAQMMZ010000003.1 Genbank pseudogene 109579 109758 . - . ID=gene-PN289_02780;Name=PN289_02780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_02780;pseudo=true JAQMMZ010000003.1 Protein Homology CDS 109579 109758 . - 0 ID=cds-PN289_02780;Parent=gene-PN289_02780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846652.1;locus_tag=PN289_02780;product=polysaccharide biosynthesis C-terminal domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000003.1 Genbank gene 109839 110342 . - . ID=gene-PN289_02785;Name=PN289_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02785 JAQMMZ010000003.1 Protein Homology CDS 109839 110342 . - 0 ID=cds-MDB8827573.1;Parent=gene-PN289_02785;Dbxref=NCBI_GP:MDB8827573.1;Name=MDB8827573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846656.1;locus_tag=PN289_02785;product=DUF1097 domain-containing protein;protein_id=MDB8827573.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 110762 112108 . - . ID=gene-PN289_02790;Name=PN289_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02790 JAQMMZ010000003.1 Protein Homology CDS 110762 112108 . - 0 ID=cds-MDB8827574.1;Parent=gene-PN289_02790;Dbxref=NCBI_GP:MDB8827574.1;Name=MDB8827574.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003512317.1;locus_tag=PN289_02790;product=glucose-6-phosphate isomerase;protein_id=MDB8827574.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 112317 113915 . - . ID=gene-PN289_02795;Name=PN289_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02795 JAQMMZ010000003.1 Protein Homology CDS 112317 113915 . - 0 ID=cds-MDB8827575.1;Parent=gene-PN289_02795;Dbxref=NCBI_GP:MDB8827575.1;Name=MDB8827575.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846659.1;locus_tag=PN289_02795;product=FAD-dependent oxidoreductase;protein_id=MDB8827575.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 113969 114343 . - . ID=gene-PN289_02800;Name=PN289_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02800 JAQMMZ010000003.1 Protein Homology CDS 113969 114343 . - 0 ID=cds-MDB8827576.1;Parent=gene-PN289_02800;Dbxref=NCBI_GP:MDB8827576.1;Name=MDB8827576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843440.1;locus_tag=PN289_02800;product=hypothetical protein;protein_id=MDB8827576.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 114354 115463 . - . ID=gene-PN289_02805;Name=PN289_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02805 JAQMMZ010000003.1 Protein Homology CDS 114354 115463 . - 0 ID=cds-MDB8827577.1;Parent=gene-PN289_02805;Dbxref=NCBI_GP:MDB8827577.1;Name=MDB8827577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843415.1;locus_tag=PN289_02805;product=SEC-C domain-containing protein;protein_id=MDB8827577.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 115622 116428 . - . ID=gene-PN289_02810;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PN289_02810 JAQMMZ010000003.1 Protein Homology CDS 115622 116428 . - 0 ID=cds-MDB8827578.1;Parent=gene-PN289_02810;Dbxref=NCBI_GP:MDB8827578.1;Name=MDB8827578.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846102.1;locus_tag=PN289_02810;product=pyrroline-5-carboxylate reductase;protein_id=MDB8827578.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 116461 117126 . - . ID=gene-PN289_02815;Name=PN289_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02815 JAQMMZ010000003.1 Protein Homology CDS 116461 117126 . - 0 ID=cds-MDB8827579.1;Parent=gene-PN289_02815;Dbxref=NCBI_GP:MDB8827579.1;Name=MDB8827579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846101.1;locus_tag=PN289_02815;product=HAD family phosphatase;protein_id=MDB8827579.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 117156 117941 . - . ID=gene-PN289_02820;Name=PN289_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02820 JAQMMZ010000003.1 Protein Homology CDS 117156 117941 . - 0 ID=cds-MDB8827580.1;Parent=gene-PN289_02820;Dbxref=NCBI_GP:MDB8827580.1;Name=MDB8827580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843435.1;locus_tag=PN289_02820;product=TatD family hydrolase;protein_id=MDB8827580.1;transl_table=11 JAQMMZ010000003.1 Genbank pseudogene 117941 119887 . - . ID=gene-PN289_02825;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=PN289_02825;pseudo=true JAQMMZ010000003.1 Protein Homology CDS 117941 119887 . - 0 ID=cds-PN289_02825;Parent=gene-PN289_02825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846100.1;locus_tag=PN289_02825;product=methionine--tRNA ligase;pseudo=true;transl_table=11 JAQMMZ010000003.1 Genbank gene 120323 120778 . - . ID=gene-PN289_02830;Name=PN289_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02830 JAQMMZ010000003.1 Protein Homology CDS 120323 120778 . - 0 ID=cds-MDB8827581.1;Parent=gene-PN289_02830;Dbxref=NCBI_GP:MDB8827581.1;Name=MDB8827581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843425.1;locus_tag=PN289_02830;product=Lrp/AsnC family transcriptional regulator;protein_id=MDB8827581.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 120811 122241 . - . ID=gene-PN289_02835;Name=PN289_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02835 JAQMMZ010000003.1 Protein Homology CDS 120811 122241 . - 0 ID=cds-MDB8827582.1;Parent=gene-PN289_02835;Dbxref=NCBI_GP:MDB8827582.1;Name=MDB8827582.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843420.1;locus_tag=PN289_02835;product=nicotinate phosphoribosyltransferase;protein_id=MDB8827582.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 122638 123477 . - . ID=gene-PN289_02840;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PN289_02840 JAQMMZ010000003.1 Protein Homology CDS 122638 123477 . - 0 ID=cds-MDB8827583.1;Parent=gene-PN289_02840;Dbxref=NCBI_GP:MDB8827583.1;Name=MDB8827583.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003435873.1;locus_tag=PN289_02840;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=MDB8827583.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 123487 124236 . - . ID=gene-PN289_02845;Name=PN289_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02845 JAQMMZ010000003.1 Protein Homology CDS 123487 124236 . - 0 ID=cds-MDB8827584.1;Parent=gene-PN289_02845;Dbxref=NCBI_GP:MDB8827584.1;Name=MDB8827584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846098.1;locus_tag=PN289_02845;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=MDB8827584.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 124245 125144 . - . ID=gene-PN289_02850;Name=PN289_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02850 JAQMMZ010000003.1 Protein Homology CDS 124245 125144 . - 0 ID=cds-MDB8827585.1;Parent=gene-PN289_02850;Dbxref=NCBI_GP:MDB8827585.1;Name=MDB8827585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843409.1;locus_tag=PN289_02850;product=stage 0 sporulation family protein;protein_id=MDB8827585.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 125138 126082 . - . ID=gene-PN289_02855;Name=PN289_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02855 JAQMMZ010000003.1 Protein Homology CDS 125138 126082 . - 0 ID=cds-MDB8827586.1;Parent=gene-PN289_02855;Dbxref=NCBI_GP:MDB8827586.1;Name=MDB8827586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843414.1;locus_tag=PN289_02855;product=DNA polymerase III subunit;protein_id=MDB8827586.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 126101 126781 . - . ID=gene-PN289_02860;Name=PN289_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02860 JAQMMZ010000003.1 Protein Homology CDS 126101 126781 . - 0 ID=cds-MDB8827587.1;Parent=gene-PN289_02860;Dbxref=NCBI_GP:MDB8827587.1;Name=MDB8827587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843419.1;locus_tag=PN289_02860;product=thymidylate kinase;protein_id=MDB8827587.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 126781 128367 . - . ID=gene-PN289_02865;Name=PN289_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02865 JAQMMZ010000003.1 Protein Homology CDS 126781 128367 . - 0 ID=cds-MDB8827588.1;Parent=gene-PN289_02865;Dbxref=NCBI_GP:MDB8827588.1;Name=MDB8827588.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846096.1;locus_tag=PN289_02865;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MDB8827588.1;transl_table=11 JAQMMZ010000003.1 Genbank pseudogene 128539 128955 . - . ID=gene-PN289_02870;Name=PN289_02870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_02870;pseudo=true JAQMMZ010000003.1 Protein Homology CDS 128539 128955 . - 0 ID=cds-PN289_02870;Parent=gene-PN289_02870;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004840981.1;locus_tag=PN289_02870;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 JAQMMZ010000003.1 Genbank gene 128951 129373 . - . ID=gene-PN289_02875;Name=PN289_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02875 JAQMMZ010000003.1 Protein Homology CDS 128951 129373 . - 0 ID=cds-MDB8827589.1;Parent=gene-PN289_02875;Dbxref=NCBI_GP:MDB8827589.1;Name=MDB8827589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008396559.1;locus_tag=PN289_02875;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=MDB8827589.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 130278 130739 . - . ID=gene-PN289_02880;Name=PN289_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02880 JAQMMZ010000003.1 Protein Homology CDS 130278 130739 . - 0 ID=cds-MDB8827590.1;Parent=gene-PN289_02880;Dbxref=NCBI_GP:MDB8827590.1;Name=MDB8827590.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=PN289_02880;product=AAA family ATPase;protein_id=MDB8827590.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 130965 131666 . - . ID=gene-PN289_02885;Name=PN289_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02885 JAQMMZ010000003.1 Protein Homology CDS 130965 131666 . - 0 ID=cds-MDB8827591.1;Parent=gene-PN289_02885;Dbxref=NCBI_GP:MDB8827591.1;Name=MDB8827591.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843442.1;locus_tag=PN289_02885;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=MDB8827591.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 131672 133216 . - . ID=gene-PN289_02890;Name=PN289_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02890 JAQMMZ010000003.1 Protein Homology CDS 131672 133216 . - 0 ID=cds-MDB8827592.1;Parent=gene-PN289_02890;Dbxref=NCBI_GP:MDB8827592.1;Name=MDB8827592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608565.1;locus_tag=PN289_02890;product=FAD-binding protein;protein_id=MDB8827592.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 133213 133752 . - . ID=gene-PN289_02895;Name=PN289_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02895 JAQMMZ010000003.1 Protein Homology CDS 133213 133752 . - 0 ID=cds-MDB8827593.1;Parent=gene-PN289_02895;Dbxref=NCBI_GP:MDB8827593.1;Name=MDB8827593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019189341.1;locus_tag=PN289_02895;product=pilus assembly protein PilX;protein_id=MDB8827593.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 133763 134281 . - . ID=gene-PN289_02900;Name=PN289_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02900 JAQMMZ010000003.1 Protein Homology CDS 133763 134281 . - 0 ID=cds-MDB8827594.1;Parent=gene-PN289_02900;Dbxref=NCBI_GP:MDB8827594.1;Name=MDB8827594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008703789.1;locus_tag=PN289_02900;product=hypothetical protein;protein_id=MDB8827594.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 134298 136652 . - . ID=gene-PN289_02905;Name=PN289_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02905 JAQMMZ010000003.1 Protein Homology CDS 134298 136652 . - 0 ID=cds-MDB8827595.1;Parent=gene-PN289_02905;Dbxref=NCBI_GP:MDB8827595.1;Name=MDB8827595.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007392024.1;locus_tag=PN289_02905;product=heavy metal translocating P-type ATPase;protein_id=MDB8827595.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 136712 137071 . - . ID=gene-PN289_02910;Name=PN289_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02910 JAQMMZ010000003.1 Protein Homology CDS 136712 137071 . - 0 ID=cds-MDB8827596.1;Parent=gene-PN289_02910;Dbxref=NCBI_GP:MDB8827596.1;Name=MDB8827596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005330964.1;locus_tag=PN289_02910;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MDB8827596.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 137297 137674 . - . ID=gene-PN289_02915;Name=PN289_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02915 JAQMMZ010000003.1 Protein Homology CDS 137297 137674 . - 0 ID=cds-MDB8827597.1;Parent=gene-PN289_02915;Dbxref=NCBI_GP:MDB8827597.1;Name=MDB8827597.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=PN289_02915;product=integrase core domain-containing protein;protein_id=MDB8827597.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 138366 138566 . + . ID=gene-PN289_02920;Name=PN289_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02920 JAQMMZ010000003.1 GeneMarkS-2+ CDS 138366 138566 . + 0 ID=cds-MDB8827598.1;Parent=gene-PN289_02920;Dbxref=NCBI_GP:MDB8827598.1;Name=MDB8827598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02920;product=hypothetical protein;protein_id=MDB8827598.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 138709 139752 . + . ID=gene-PN289_02925;Name=PN289_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02925 JAQMMZ010000003.1 Protein Homology CDS 138709 139752 . + 0 ID=cds-MDB8827599.1;Parent=gene-PN289_02925;Dbxref=NCBI_GP:MDB8827599.1;Name=MDB8827599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005965117.1;locus_tag=PN289_02925;product=Fic family protein;protein_id=MDB8827599.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 140045 140404 . + . ID=gene-PN289_02930;Name=PN289_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02930 JAQMMZ010000003.1 Protein Homology CDS 140045 140404 . + 0 ID=cds-MDB8827600.1;Parent=gene-PN289_02930;Dbxref=NCBI_GP:MDB8827600.1;Name=MDB8827600.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.2;locus_tag=PN289_02930;product=transposase;protein_id=MDB8827600.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 140675 140917 . + . ID=gene-PN289_02935;Name=PN289_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02935 JAQMMZ010000003.1 Protein Homology CDS 140675 140917 . + 0 ID=cds-MDB8827601.1;Parent=gene-PN289_02935;Dbxref=NCBI_GP:MDB8827601.1;Name=MDB8827601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015516013.1;locus_tag=PN289_02935;product=DUF6061 family protein;protein_id=MDB8827601.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 140929 142017 . - . ID=gene-PN289_02940;Name=PN289_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02940 JAQMMZ010000003.1 Protein Homology CDS 140929 142017 . - 0 ID=cds-MDB8827602.1;Parent=gene-PN289_02940;Dbxref=NCBI_GP:MDB8827602.1;Name=MDB8827602.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=PN289_02940;product=restriction endonuclease subunit S;protein_id=MDB8827602.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 142014 144419 . - . ID=gene-PN289_02945;Name=PN289_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02945 JAQMMZ010000003.1 Protein Homology CDS 142014 144419 . - 0 ID=cds-MDB8827603.1;Parent=gene-PN289_02945;Dbxref=NCBI_GP:MDB8827603.1;Name=MDB8827603.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=PN289_02945;product=N-6 DNA methylase;protein_id=MDB8827603.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 144765 145649 . - . ID=gene-PN289_02950;Name=PN289_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02950 JAQMMZ010000003.1 GeneMarkS-2+ CDS 144765 145649 . - 0 ID=cds-MDB8827604.1;Parent=gene-PN289_02950;Dbxref=NCBI_GP:MDB8827604.1;Name=MDB8827604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02950;product=hypothetical protein;protein_id=MDB8827604.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 145574 146134 . - . ID=gene-PN289_02955;Name=PN289_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02955 JAQMMZ010000003.1 Protein Homology CDS 145574 146134 . - 0 ID=cds-MDB8827605.1;Parent=gene-PN289_02955;Dbxref=NCBI_GP:MDB8827605.1;Name=MDB8827605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013258.2;locus_tag=PN289_02955;product=plasmid recombination protein;protein_id=MDB8827605.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 146368 146610 . - . ID=gene-PN289_02960;Name=PN289_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02960 JAQMMZ010000003.1 Protein Homology CDS 146368 146610 . - 0 ID=cds-MDB8827606.1;Parent=gene-PN289_02960;Dbxref=NCBI_GP:MDB8827606.1;Name=MDB8827606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013280038.1;locus_tag=PN289_02960;product=hypothetical protein;protein_id=MDB8827606.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 146758 147192 . + . ID=gene-PN289_02965;Name=PN289_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02965 JAQMMZ010000003.1 Protein Homology CDS 146758 147192 . + 0 ID=cds-MDB8827607.1;Parent=gene-PN289_02965;Dbxref=NCBI_GP:MDB8827607.1;Name=MDB8827607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014078575.1;locus_tag=PN289_02965;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827607.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 147249 148034 . + . ID=gene-PN289_02970;Name=PN289_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02970 JAQMMZ010000003.1 GeneMarkS-2+ CDS 147249 148034 . + 0 ID=cds-MDB8827608.1;Parent=gene-PN289_02970;Dbxref=NCBI_GP:MDB8827608.1;Name=MDB8827608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_02970;product=hypothetical protein;protein_id=MDB8827608.1;transl_table=11 JAQMMZ010000003.1 Genbank gene 148014 149068 . - . ID=gene-PN289_02975;Name=ltrA;end_range=149068,.;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=PN289_02975;partial=true JAQMMZ010000003.1 Protein Homology CDS 148014 149068 . - 2 ID=cds-MDB8827609.1;Parent=gene-PN289_02975;Dbxref=NCBI_GP:MDB8827609.1;Name=MDB8827609.1;Ontology_term=GO:0000373,GO:0003964;end_range=149068,.;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001901474.1;locus_tag=PN289_02975;partial=true;product=group II intron reverse transcriptase/maturase;protein_id=MDB8827609.1;transl_table=11 ##sequence-region JAQMMZ010000040.1 1 2209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000040.1 Genbank region 1 2209 . + . ID=JAQMMZ010000040.1:1..2209;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000040.1 Genbank gene 1 2209 . + . ID=gene-PN289_09345;Name=PN289_09345;gbkey=Gene;gene_biotype=rRNA;locus_tag=PN289_09345;partial=true;start_range=.,1 JAQMMZ010000040.1 cmsearch rRNA 1 2209 . + . ID=rna-PN289_09345;Parent=gene-PN289_09345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09345;partial=true;product=23S ribosomal RNA;start_range=.,1 JAQMMZ010000040.1 cmsearch exon 1 2209 . + . ID=exon-PN289_09345-1;Parent=rna-PN289_09345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09345;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region JAQMMZ010000041.1 1 1775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000041.1 Genbank region 1 1775 . + . ID=JAQMMZ010000041.1:1..1775;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000041.1 Genbank gene 1 1091 . - . ID=gene-PN289_09350;Name=PN289_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09350;partial=true;start_range=.,1 JAQMMZ010000041.1 Protein Homology CDS 1 1091 . - 0 ID=cds-MDB8828842.1;Parent=gene-PN289_09350;Dbxref=NCBI_GP:MDB8828842.1;Name=MDB8828842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595264.1;locus_tag=PN289_09350;partial=true;product=cell wall-binding repeat-containing protein;protein_id=MDB8828842.1;start_range=.,1;transl_table=11 JAQMMZ010000041.1 Genbank gene 1274 1347 . - . ID=gene-PN289_09355;Name=PN289_09355;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09355 JAQMMZ010000041.1 tRNAscan-SE tRNA 1274 1347 . - . ID=rna-PN289_09355;Parent=gene-PN289_09355;anticodon=(pos:complement(1311..1313));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09355;product=tRNA-Arg JAQMMZ010000041.1 tRNAscan-SE exon 1274 1347 . - . ID=exon-PN289_09355-1;Parent=rna-PN289_09355;anticodon=(pos:complement(1311..1313));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09355;product=tRNA-Arg JAQMMZ010000041.1 Genbank gene 1358 1428 . - . ID=gene-PN289_09360;Name=PN289_09360;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09360 JAQMMZ010000041.1 tRNAscan-SE tRNA 1358 1428 . - . ID=rna-PN289_09360;Parent=gene-PN289_09360;anticodon=(pos:complement(1394..1396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09360;product=tRNA-Cys JAQMMZ010000041.1 tRNAscan-SE exon 1358 1428 . - . ID=exon-PN289_09360-1;Parent=rna-PN289_09360;anticodon=(pos:complement(1394..1396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09360;product=tRNA-Cys JAQMMZ010000041.1 Genbank gene 1445 1517 . - . ID=gene-PN289_09365;Name=PN289_09365;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09365 JAQMMZ010000041.1 tRNAscan-SE tRNA 1445 1517 . - . ID=rna-PN289_09365;Parent=gene-PN289_09365;anticodon=(pos:complement(1482..1484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09365;product=tRNA-Lys JAQMMZ010000041.1 tRNAscan-SE exon 1445 1517 . - . ID=exon-PN289_09365-1;Parent=rna-PN289_09365;anticodon=(pos:complement(1482..1484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09365;product=tRNA-Lys JAQMMZ010000041.1 Genbank gene 1538 1611 . - . ID=gene-PN289_09370;Name=PN289_09370;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09370 JAQMMZ010000041.1 tRNAscan-SE tRNA 1538 1611 . - . ID=rna-PN289_09370;Parent=gene-PN289_09370;anticodon=(pos:complement(1575..1577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09370;product=tRNA-Met JAQMMZ010000041.1 tRNAscan-SE exon 1538 1611 . - . ID=exon-PN289_09370-1;Parent=rna-PN289_09370;anticodon=(pos:complement(1575..1577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09370;product=tRNA-Met JAQMMZ010000041.1 Genbank gene 1619 1694 . - . ID=gene-PN289_09375;Name=PN289_09375;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_09375 JAQMMZ010000041.1 tRNAscan-SE tRNA 1619 1694 . - . ID=rna-PN289_09375;Parent=gene-PN289_09375;anticodon=(pos:complement(1659..1661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09375;product=tRNA-Phe JAQMMZ010000041.1 tRNAscan-SE exon 1619 1694 . - . ID=exon-PN289_09375-1;Parent=rna-PN289_09375;anticodon=(pos:complement(1659..1661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_09375;product=tRNA-Phe ##sequence-region JAQMMZ010000042.1 1 1434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000042.1 Genbank region 1 1434 . + . ID=JAQMMZ010000042.1:1..1434;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000042.1 Genbank gene 53 1434 . - . ID=gene-PN289_09380;Name=PN289_09380;end_range=1434,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=PN289_09380;partial=true JAQMMZ010000042.1 cmsearch rRNA 53 1434 . - . ID=rna-PN289_09380;Parent=gene-PN289_09380;Dbxref=RFAM:RF00177;end_range=1434,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09380;partial=true;product=16S ribosomal RNA JAQMMZ010000042.1 cmsearch exon 53 1434 . - . ID=exon-PN289_09380-1;Parent=rna-PN289_09380;Dbxref=RFAM:RF00177;end_range=1434,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_09380;partial=true;product=16S ribosomal RNA ##sequence-region JAQMMZ010000043.1 1 1346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000043.1 Genbank region 1 1346 . + . ID=JAQMMZ010000043.1:1..1346;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000043.1 Genbank gene 76 309 . - . ID=gene-PN289_09385;Name=PN289_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09385 JAQMMZ010000043.1 Protein Homology CDS 76 309 . - 0 ID=cds-MDB8828843.1;Parent=gene-PN289_09385;Dbxref=NCBI_GP:MDB8828843.1;Name=MDB8828843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021178.2;locus_tag=PN289_09385;product=YjcQ family protein;protein_id=MDB8828843.1;transl_table=11 JAQMMZ010000043.1 Genbank gene 321 515 . - . ID=gene-PN289_09390;Name=PN289_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09390 JAQMMZ010000043.1 Protein Homology CDS 321 515 . - 0 ID=cds-MDB8828844.1;Parent=gene-PN289_09390;Dbxref=NCBI_GP:MDB8828844.1;Name=MDB8828844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843520.1;locus_tag=PN289_09390;product=hypothetical protein;protein_id=MDB8828844.1;transl_table=11 JAQMMZ010000043.1 Genbank gene 484 1023 . - . ID=gene-PN289_09395;Name=PN289_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09395 JAQMMZ010000043.1 Protein Homology CDS 484 1023 . - 0 ID=cds-MDB8828845.1;Parent=gene-PN289_09395;Dbxref=NCBI_GP:MDB8828845.1;Name=MDB8828845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843521.1;locus_tag=PN289_09395;product=polymorphic toxin type 50 domain-containing protein;protein_id=MDB8828845.1;transl_table=11 JAQMMZ010000043.1 Genbank gene 1059 1244 . - . ID=gene-PN289_09400;Name=PN289_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09400 JAQMMZ010000043.1 Protein Homology CDS 1059 1244 . - 0 ID=cds-MDB8828846.1;Parent=gene-PN289_09400;Dbxref=NCBI_GP:MDB8828846.1;Name=MDB8828846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002584978.1;locus_tag=PN289_09400;product=transposon-encoded TnpW family protein;protein_id=MDB8828846.1;transl_table=11 ##sequence-region JAQMMZ010000044.1 1 1340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000044.1 Genbank region 1 1340 . + . ID=JAQMMZ010000044.1:1..1340;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000044.1 Genbank gene 293 1006 . + . ID=gene-PN289_09405;Name=PN289_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09405 JAQMMZ010000044.1 Protein Homology CDS 293 1006 . + 0 ID=cds-MDB8828847.1;Parent=gene-PN289_09405;Dbxref=NCBI_GP:MDB8828847.1;Name=MDB8828847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PN289_09405;product=LytTR family DNA-binding domain-containing protein;protein_id=MDB8828847.1;transl_table=11 ##sequence-region JAQMMZ010000045.1 1 1240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000045.1 Genbank region 1 1240 . + . ID=JAQMMZ010000045.1:1..1240;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000045.1 Genbank gene 1 1154 . - . ID=gene-PN289_09410;Name=PN289_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09410;partial=true;start_range=.,1 JAQMMZ010000045.1 Protein Homology CDS 1 1154 . - 0 ID=cds-MDB8828848.1;Parent=gene-PN289_09410;Dbxref=NCBI_GP:MDB8828848.1;Name=MDB8828848.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844533.1;locus_tag=PN289_09410;partial=true;product=ISL3 family transposase;protein_id=MDB8828848.1;start_range=.,1;transl_table=11 ##sequence-region JAQMMZ010000046.1 1 1120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000046.1 Genbank region 1 1120 . + . ID=JAQMMZ010000046.1:1..1120;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000046.1 Genbank gene 104 1090 . + . ID=gene-PN289_09415;Name=PN289_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_09415 JAQMMZ010000046.1 Protein Homology CDS 104 1090 . + 0 ID=cds-MDB8828849.1;Parent=gene-PN289_09415;Dbxref=NCBI_GP:MDB8828849.1;Name=MDB8828849.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PN289_09415;product=IS30 family transposase;protein_id=MDB8828849.1;transl_table=11 ##sequence-region JAQMMZ010000004.1 1 119628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000004.1 Genbank region 1 119628 . + . ID=JAQMMZ010000004.1:1..119628;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000004.1 Genbank gene 215 1315 . - . ID=gene-PN289_02980;Name=PN289_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02980 JAQMMZ010000004.1 Protein Homology CDS 215 1315 . - 0 ID=cds-MDB8827610.1;Parent=gene-PN289_02980;Dbxref=NCBI_GP:MDB8827610.1;Name=MDB8827610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845227.1;locus_tag=PN289_02980;product=DEAD/DEAH box helicase;protein_id=MDB8827610.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 1786 2958 . + . ID=gene-PN289_02985;Name=nifV;gbkey=Gene;gene=nifV;gene_biotype=protein_coding;locus_tag=PN289_02985 JAQMMZ010000004.1 Protein Homology CDS 1786 2958 . + 0 ID=cds-MDB8827611.1;Parent=gene-PN289_02985;Dbxref=NCBI_GP:MDB8827611.1;Name=MDB8827611.1;Ontology_term=GO:0004410;gbkey=CDS;gene=nifV;go_function=homocitrate synthase activity|0004410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842477.1;locus_tag=PN289_02985;product=homocitrate synthase;protein_id=MDB8827611.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 3011 4942 . + . ID=gene-PN289_02990;Name=PN289_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02990 JAQMMZ010000004.1 Protein Homology CDS 3011 4942 . + 0 ID=cds-MDB8827612.1;Parent=gene-PN289_02990;Dbxref=NCBI_GP:MDB8827612.1;Name=MDB8827612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595475.1;locus_tag=PN289_02990;product=aconitate hydratase;protein_id=MDB8827612.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 4952 5986 . + . ID=gene-PN289_02995;Name=PN289_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_02995 JAQMMZ010000004.1 Protein Homology CDS 4952 5986 . + 0 ID=cds-MDB8827613.1;Parent=gene-PN289_02995;Dbxref=NCBI_GP:MDB8827613.1;Name=MDB8827613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842480.1;locus_tag=PN289_02995;product=isocitrate/isopropylmalate dehydrogenase family protein;protein_id=MDB8827613.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 6122 8227 . + . ID=gene-PN289_03000;Name=PN289_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03000 JAQMMZ010000004.1 Protein Homology CDS 6122 8227 . + 0 ID=cds-MDB8827614.1;Parent=gene-PN289_03000;Dbxref=NCBI_GP:MDB8827614.1;Name=MDB8827614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842471.1;locus_tag=PN289_03000;product=glycosyltransferase family 4 protein;protein_id=MDB8827614.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 8267 8989 . + . ID=gene-PN289_03005;Name=PN289_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03005 JAQMMZ010000004.1 Protein Homology CDS 8267 8989 . + 0 ID=cds-MDB8827615.1;Parent=gene-PN289_03005;Dbxref=NCBI_GP:MDB8827615.1;Name=MDB8827615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845231.1;locus_tag=PN289_03005;product=hypothetical protein;protein_id=MDB8827615.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 9057 9668 . + . ID=gene-PN289_03010;Name=PN289_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03010 JAQMMZ010000004.1 Protein Homology CDS 9057 9668 . + 0 ID=cds-MDB8827616.1;Parent=gene-PN289_03010;Dbxref=NCBI_GP:MDB8827616.1;Name=MDB8827616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595477.1;locus_tag=PN289_03010;product=DUF445 family protein;protein_id=MDB8827616.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 9843 11219 . - . ID=gene-PN289_03015;Name=PN289_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03015 JAQMMZ010000004.1 Protein Homology CDS 9843 11219 . - 0 ID=cds-MDB8827617.1;Parent=gene-PN289_03015;Dbxref=NCBI_GP:MDB8827617.1;Name=MDB8827617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845233.1;locus_tag=PN289_03015;product=alanine/glycine:cation symporter family protein;protein_id=MDB8827617.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 11846 13633 . + . ID=gene-PN289_03020;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=PN289_03020 JAQMMZ010000004.1 Protein Homology CDS 11846 13633 . + 0 ID=cds-MDB8827618.1;Parent=gene-PN289_03020;Dbxref=NCBI_GP:MDB8827618.1;Name=MDB8827618.1;Ontology_term=GO:0043805;gbkey=CDS;gene=iorA;go_function=indolepyruvate ferredoxin oxidoreductase activity|0043805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842473.1;locus_tag=PN289_03020;product=indolepyruvate ferredoxin oxidoreductase subunit alpha;protein_id=MDB8827618.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 13635 14207 . + . ID=gene-PN289_03025;Name=PN289_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03025 JAQMMZ010000004.1 Protein Homology CDS 13635 14207 . + 0 ID=cds-MDB8827619.1;Parent=gene-PN289_03025;Dbxref=NCBI_GP:MDB8827619.1;Name=MDB8827619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845235.1;locus_tag=PN289_03025;product=indolepyruvate oxidoreductase subunit beta;protein_id=MDB8827619.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 14380 15276 . + . ID=gene-PN289_03030;Name=PN289_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03030 JAQMMZ010000004.1 Protein Homology CDS 14380 15276 . + 0 ID=cds-MDB8827620.1;Parent=gene-PN289_03030;Dbxref=NCBI_GP:MDB8827620.1;Name=MDB8827620.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842468.1;locus_tag=PN289_03030;product=bifunctional enoyl-CoA hydratase/phosphate acetyltransferase;protein_id=MDB8827620.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 15318 16376 . + . ID=gene-PN289_03035;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=PN289_03035 JAQMMZ010000004.1 Protein Homology CDS 15318 16376 . + 0 ID=cds-MDB8827621.1;Parent=gene-PN289_03035;Dbxref=NCBI_GP:MDB8827621.1;Name=MDB8827621.1;Ontology_term=GO:0006113,GO:0047761;gbkey=CDS;gene=buk;go_function=butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845237.1;locus_tag=PN289_03035;product=butyrate kinase;protein_id=MDB8827621.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 16768 18693 . + . ID=gene-PN289_03040;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PN289_03040 JAQMMZ010000004.1 Protein Homology CDS 16768 18693 . + 0 ID=cds-MDB8827622.1;Parent=gene-PN289_03040;Dbxref=NCBI_GP:MDB8827622.1;Name=MDB8827622.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842761.1;locus_tag=PN289_03040;product=threonine--tRNA ligase;protein_id=MDB8827622.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 18865 19377 . - . ID=gene-PN289_03045;Name=PN289_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03045 JAQMMZ010000004.1 Protein Homology CDS 18865 19377 . - 0 ID=cds-MDB8827623.1;Parent=gene-PN289_03045;Dbxref=NCBI_GP:MDB8827623.1;Name=MDB8827623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003448431.1;locus_tag=PN289_03045;product=ferritin;protein_id=MDB8827623.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 19639 19722 . - . ID=gene-PN289_03050;Name=PN289_03050;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_03050 JAQMMZ010000004.1 tRNAscan-SE tRNA 19639 19722 . - . ID=rna-PN289_03050;Parent=gene-PN289_03050;anticodon=(pos:complement(19686..19688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_03050;product=tRNA-Leu JAQMMZ010000004.1 tRNAscan-SE exon 19639 19722 . - . ID=exon-PN289_03050-1;Parent=rna-PN289_03050;anticodon=(pos:complement(19686..19688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_03050;product=tRNA-Leu JAQMMZ010000004.1 Genbank gene 19780 20397 . - . ID=gene-PN289_03055;Name=PN289_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03055 JAQMMZ010000004.1 Protein Homology CDS 19780 20397 . - 0 ID=cds-MDB8827624.1;Parent=gene-PN289_03055;Dbxref=NCBI_GP:MDB8827624.1;Name=MDB8827624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842757.1;locus_tag=PN289_03055;product=ECF transporter S component;protein_id=MDB8827624.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 20631 21497 . + . ID=gene-PN289_03060;Name=PN289_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03060 JAQMMZ010000004.1 Protein Homology CDS 20631 21497 . + 0 ID=cds-MDB8827625.1;Parent=gene-PN289_03060;Dbxref=NCBI_GP:MDB8827625.1;Name=MDB8827625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842763.1;locus_tag=PN289_03060;product=methionyl aminopeptidase;protein_id=MDB8827625.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 21912 22424 . + . ID=gene-PN289_03065;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PN289_03065 JAQMMZ010000004.1 Protein Homology CDS 21912 22424 . + 0 ID=cds-MDB8827626.1;Parent=gene-PN289_03065;Dbxref=NCBI_GP:MDB8827626.1;Name=MDB8827626.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009528606.1;locus_tag=PN289_03065;product=translation initiation factor IF-3;protein_id=MDB8827626.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 22451 22648 . + . ID=gene-PN289_03070;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PN289_03070 JAQMMZ010000004.1 Protein Homology CDS 22451 22648 . + 0 ID=cds-MDB8827627.1;Parent=gene-PN289_03070;Dbxref=NCBI_GP:MDB8827627.1;Name=MDB8827627.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842818.1;locus_tag=PN289_03070;product=50S ribosomal protein L35;protein_id=MDB8827627.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 22673 23029 . + . ID=gene-PN289_03075;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PN289_03075 JAQMMZ010000004.1 Protein Homology CDS 22673 23029 . + 0 ID=cds-MDB8827628.1;Parent=gene-PN289_03075;Dbxref=NCBI_GP:MDB8827628.1;Name=MDB8827628.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003423569.1;locus_tag=PN289_03075;product=50S ribosomal protein L20;protein_id=MDB8827628.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 23212 23871 . + . ID=gene-PN289_03080;Name=PN289_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03080 JAQMMZ010000004.1 Protein Homology CDS 23212 23871 . + 0 ID=cds-MDB8827629.1;Parent=gene-PN289_03080;Dbxref=NCBI_GP:MDB8827629.1;Name=MDB8827629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842786.1;locus_tag=PN289_03080;product=TetR/AcrR family transcriptional regulator;protein_id=MDB8827629.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 23925 24242 . - . ID=gene-PN289_03085;Name=PN289_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03085 JAQMMZ010000004.1 Protein Homology CDS 23925 24242 . - 0 ID=cds-MDB8827630.1;Parent=gene-PN289_03085;Dbxref=NCBI_GP:MDB8827630.1;Name=MDB8827630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842808.1;locus_tag=PN289_03085;product=hypothetical protein;protein_id=MDB8827630.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 24259 24963 . - . ID=gene-PN289_03090;Name=PN289_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03090 JAQMMZ010000004.1 Protein Homology CDS 24259 24963 . - 0 ID=cds-MDB8827631.1;Parent=gene-PN289_03090;Dbxref=NCBI_GP:MDB8827631.1;Name=MDB8827631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842810.1;locus_tag=PN289_03090;product=hypothetical protein;protein_id=MDB8827631.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 25354 26046 . + . ID=gene-PN289_03095;Name=PN289_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03095 JAQMMZ010000004.1 Protein Homology CDS 25354 26046 . + 0 ID=cds-MDB8827632.1;Parent=gene-PN289_03095;Dbxref=NCBI_GP:MDB8827632.1;Name=MDB8827632.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595482.1;locus_tag=PN289_03095;product=3D domain-containing protein;protein_id=MDB8827632.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 26206 26790 . - . ID=gene-PN289_03100;Name=PN289_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03100 JAQMMZ010000004.1 Protein Homology CDS 26206 26790 . - 0 ID=cds-MDB8827633.1;Parent=gene-PN289_03100;Dbxref=NCBI_GP:MDB8827633.1;Name=MDB8827633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167306.1;locus_tag=PN289_03100;product=XRE family transcriptional regulator;protein_id=MDB8827633.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 27182 27676 . + . ID=gene-PN289_03105;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PN289_03105 JAQMMZ010000004.1 Protein Homology CDS 27182 27676 . + 0 ID=cds-MDB8827634.1;Parent=gene-PN289_03105;Dbxref=NCBI_GP:MDB8827634.1;Name=MDB8827634.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167307.1;locus_tag=PN289_03105;product=crossover junction endodeoxyribonuclease RuvC;protein_id=MDB8827634.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 27812 28435 . + . ID=gene-PN289_03110;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PN289_03110 JAQMMZ010000004.1 Protein Homology CDS 27812 28435 . + 0 ID=cds-MDB8827635.1;Parent=gene-PN289_03110;Dbxref=NCBI_GP:MDB8827635.1;Name=MDB8827635.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167309.1;locus_tag=PN289_03110;product=Holliday junction branch migration protein RuvA;protein_id=MDB8827635.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 28449 29465 . + . ID=gene-PN289_03115;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PN289_03115 JAQMMZ010000004.1 Protein Homology CDS 28449 29465 . + 0 ID=cds-MDB8827636.1;Parent=gene-PN289_03115;Dbxref=NCBI_GP:MDB8827636.1;Name=MDB8827636.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842794.1;locus_tag=PN289_03115;product=Holliday junction branch migration DNA helicase RuvB;protein_id=MDB8827636.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 29484 30506 . + . ID=gene-PN289_03120;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PN289_03120 JAQMMZ010000004.1 Protein Homology CDS 29484 30506 . + 0 ID=cds-MDB8827637.1;Parent=gene-PN289_03120;Dbxref=NCBI_GP:MDB8827637.1;Name=MDB8827637.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842764.1;locus_tag=PN289_03120;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=MDB8827637.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 30603 31721 . + . ID=gene-PN289_03125;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PN289_03125 JAQMMZ010000004.1 Protein Homology CDS 30603 31721 . + 0 ID=cds-MDB8827638.1;Parent=gene-PN289_03125;Dbxref=NCBI_GP:MDB8827638.1;Name=MDB8827638.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842759.1;locus_tag=PN289_03125;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=MDB8827638.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 31777 32097 . + . ID=gene-PN289_03130;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PN289_03130 JAQMMZ010000004.1 Protein Homology CDS 31777 32097 . + 0 ID=cds-MDB8827639.1;Parent=gene-PN289_03130;Dbxref=NCBI_GP:MDB8827639.1;Name=MDB8827639.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842802.1;locus_tag=PN289_03130;product=preprotein translocase subunit YajC;protein_id=MDB8827639.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 32173 32316 . + . ID=gene-PN289_03135;Name=scfA;gbkey=Gene;gene=scfA;gene_biotype=protein_coding;locus_tag=PN289_03135 JAQMMZ010000004.1 Protein Homology CDS 32173 32316 . + 0 ID=cds-MDB8827640.1;Parent=gene-PN289_03135;Dbxref=NCBI_GP:MDB8827640.1;Name=MDB8827640.1;gbkey=CDS;gene=scfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891067.1;locus_tag=PN289_03135;product=six-cysteine ranthipeptide SCIFF;protein_id=MDB8827640.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 32382 33341 . + . ID=gene-PN289_03140;Name=PN289_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03140 JAQMMZ010000004.1 Protein Homology CDS 32382 33341 . + 0 ID=cds-MDB8827641.1;Parent=gene-PN289_03140;Dbxref=NCBI_GP:MDB8827641.1;Name=MDB8827641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842758.1;locus_tag=PN289_03140;product=cell wall-binding repeat-containing protein;protein_id=MDB8827641.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 33344 35407 . + . ID=gene-PN289_03145;Name=PN289_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03145 JAQMMZ010000004.1 Protein Homology CDS 33344 35407 . + 0 ID=cds-MDB8827642.1;Parent=gene-PN289_03145;Dbxref=NCBI_GP:MDB8827642.1;Name=MDB8827642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842811.1;locus_tag=PN289_03145;product=LTA synthase family protein;protein_id=MDB8827642.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 35623 36990 . + . ID=gene-PN289_03150;Name=PN289_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03150 JAQMMZ010000004.1 Protein Homology CDS 35623 36990 . + 0 ID=cds-MDB8827643.1;Parent=gene-PN289_03150;Dbxref=NCBI_GP:MDB8827643.1;Name=MDB8827643.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167317.1;locus_tag=PN289_03150;product=potassium transporter TrkG;protein_id=MDB8827643.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 37088 37741 . + . ID=gene-PN289_03155;Name=PN289_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03155 JAQMMZ010000004.1 Protein Homology CDS 37088 37741 . + 0 ID=cds-MDB8827644.1;Parent=gene-PN289_03155;Dbxref=NCBI_GP:MDB8827644.1;Name=MDB8827644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842830.1;locus_tag=PN289_03155;product=TrkA family potassium uptake protein;protein_id=MDB8827644.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 37753 38535 . + . ID=gene-PN289_03160;Name=PN289_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03160 JAQMMZ010000004.1 Protein Homology CDS 37753 38535 . + 0 ID=cds-MDB8827645.1;Parent=gene-PN289_03160;Dbxref=NCBI_GP:MDB8827645.1;Name=MDB8827645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167318.1;locus_tag=PN289_03160;product=RNA methyltransferase;protein_id=MDB8827645.1;transl_table=11 JAQMMZ010000004.1 cmsearch binding_site 38693 38961 . + . ID=id-JAQMMZ010000004.1:38693..38961;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000004.1 Genbank gene 39007 40038 . + . ID=gene-PN289_03165;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PN289_03165 JAQMMZ010000004.1 Protein Homology CDS 39007 40038 . + 0 ID=cds-MDB8827646.1;Parent=gene-PN289_03165;Dbxref=NCBI_GP:MDB8827646.1;Name=MDB8827646.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003436795.1;locus_tag=PN289_03165;product=phenylalanine--tRNA ligase subunit alpha;protein_id=MDB8827646.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 40051 42444 . + . ID=gene-PN289_03170;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PN289_03170 JAQMMZ010000004.1 Protein Homology CDS 40051 42444 . + 0 ID=cds-MDB8827647.1;Parent=gene-PN289_03170;Dbxref=NCBI_GP:MDB8827647.1;Name=MDB8827647.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842766.1;locus_tag=PN289_03170;product=phenylalanine--tRNA ligase subunit beta;protein_id=MDB8827647.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 43298 43873 . + . ID=gene-PN289_03175;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PN289_03175 JAQMMZ010000004.1 Protein Homology CDS 43298 43873 . + 0 ID=cds-MDB8827648.1;Parent=gene-PN289_03175;Dbxref=NCBI_GP:MDB8827648.1;Name=MDB8827648.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845400.1;locus_tag=PN289_03175;product=cell division protein ZapA;protein_id=MDB8827648.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 43942 46425 . + . ID=gene-PN289_03180;Name=PN289_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03180 JAQMMZ010000004.1 Protein Homology CDS 43942 46425 . + 0 ID=cds-MDB8827649.1;Parent=gene-PN289_03180;Dbxref=NCBI_GP:MDB8827649.1;Name=MDB8827649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845399.1;locus_tag=PN289_03180;product=DUF3656 domain-containing protein;protein_id=MDB8827649.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 46459 48075 . + . ID=gene-PN289_03185;Name=PN289_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03185 JAQMMZ010000004.1 Protein Homology CDS 46459 48075 . + 0 ID=cds-MDB8827650.1;Parent=gene-PN289_03185;Dbxref=NCBI_GP:MDB8827650.1;Name=MDB8827650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842790.1;locus_tag=PN289_03185;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=MDB8827650.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 48097 48555 . + . ID=gene-PN289_03190;Name=PN289_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03190 JAQMMZ010000004.1 Protein Homology CDS 48097 48555 . + 0 ID=cds-MDB8827651.1;Parent=gene-PN289_03190;Dbxref=NCBI_GP:MDB8827651.1;Name=MDB8827651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842768.1;locus_tag=PN289_03190;product=NfeD family protein;protein_id=MDB8827651.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 48574 49521 . + . ID=gene-PN289_03195;Name=PN289_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03195 JAQMMZ010000004.1 Protein Homology CDS 48574 49521 . + 0 ID=cds-MDB8827652.1;Parent=gene-PN289_03195;Dbxref=NCBI_GP:MDB8827652.1;Name=MDB8827652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842825.1;locus_tag=PN289_03195;product=SPFH/Band 7/PHB domain protein;protein_id=MDB8827652.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 49639 49980 . + . ID=gene-PN289_03200;Name=PN289_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03200 JAQMMZ010000004.1 Protein Homology CDS 49639 49980 . + 0 ID=cds-MDB8827653.1;Parent=gene-PN289_03200;Dbxref=NCBI_GP:MDB8827653.1;Name=MDB8827653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842798.1;locus_tag=PN289_03200;product=DUF6483 family protein;protein_id=MDB8827653.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 50193 51695 . + . ID=gene-PN289_03205;Name=PN289_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03205 JAQMMZ010000004.1 Protein Homology CDS 50193 51695 . + 0 ID=cds-MDB8827654.1;Parent=gene-PN289_03205;Dbxref=NCBI_GP:MDB8827654.1;Name=MDB8827654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595486.1;locus_tag=PN289_03205;product=DUF1846 domain-containing protein;protein_id=MDB8827654.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 51904 53142 . + . ID=gene-PN289_03210;Name=PN289_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03210 JAQMMZ010000004.1 Protein Homology CDS 51904 53142 . + 0 ID=cds-MDB8827655.1;Parent=gene-PN289_03210;Dbxref=NCBI_GP:MDB8827655.1;Name=MDB8827655.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595487.1;locus_tag=PN289_03210;product=S1 RNA-binding domain-containing protein;protein_id=MDB8827655.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 53297 54799 . + . ID=gene-PN289_03215;Name=PN289_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03215 JAQMMZ010000004.1 Protein Homology CDS 53297 54799 . + 0 ID=cds-MDB8827656.1;Parent=gene-PN289_03215;Dbxref=NCBI_GP:MDB8827656.1;Name=MDB8827656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845395.1;locus_tag=PN289_03215;product=DUF6056 family protein;protein_id=MDB8827656.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 54812 55297 . + . ID=gene-PN289_03220;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PN289_03220 JAQMMZ010000004.1 Protein Homology CDS 54812 55297 . + 0 ID=cds-MDB8827657.1;Parent=gene-PN289_03220;Dbxref=NCBI_GP:MDB8827657.1;Name=MDB8827657.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595488.1;locus_tag=PN289_03220;product=Cys-tRNA(Pro) deacylase;protein_id=MDB8827657.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 55309 56148 . + . ID=gene-PN289_03225;Name=PN289_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03225 JAQMMZ010000004.1 Protein Homology CDS 55309 56148 . + 0 ID=cds-MDB8827658.1;Parent=gene-PN289_03225;Dbxref=NCBI_GP:MDB8827658.1;Name=MDB8827658.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845393.1;locus_tag=PN289_03225;product=fumarate hydratase;protein_id=MDB8827658.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 56158 56697 . + . ID=gene-PN289_03230;Name=PN289_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03230 JAQMMZ010000004.1 Protein Homology CDS 56158 56697 . + 0 ID=cds-MDB8827659.1;Parent=gene-PN289_03230;Dbxref=NCBI_GP:MDB8827659.1;Name=MDB8827659.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842820.1;locus_tag=PN289_03230;product=Fe-S-containing hydro-lyase;protein_id=MDB8827659.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 56707 57882 . + . ID=gene-PN289_03235;Name=PN289_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03235 JAQMMZ010000004.1 Protein Homology CDS 56707 57882 . + 0 ID=cds-MDB8827660.1;Parent=gene-PN289_03235;Dbxref=NCBI_GP:MDB8827660.1;Name=MDB8827660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845391.1;locus_tag=PN289_03235;product=NAD-dependent malic enzyme;protein_id=MDB8827660.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 57892 58740 . + . ID=gene-PN289_03240;Name=PN289_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03240 JAQMMZ010000004.1 Protein Homology CDS 57892 58740 . + 0 ID=cds-MDB8827661.1;Parent=gene-PN289_03240;Dbxref=NCBI_GP:MDB8827661.1;Name=MDB8827661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595489.1;locus_tag=PN289_03240;product=S1-like domain-containing RNA-binding protein;protein_id=MDB8827661.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 59131 61488 . + . ID=gene-PN289_03245;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PN289_03245 JAQMMZ010000004.1 Protein Homology CDS 59131 61488 . + 0 ID=cds-MDB8827662.1;Parent=gene-PN289_03245;Dbxref=NCBI_GP:MDB8827662.1;Name=MDB8827662.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842775.1;locus_tag=PN289_03245;product=preprotein translocase subunit SecA;protein_id=MDB8827662.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 61510 62901 . + . ID=gene-PN289_03250;Name=PN289_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03250 JAQMMZ010000004.1 Protein Homology CDS 61510 62901 . + 0 ID=cds-MDB8827663.1;Parent=gene-PN289_03250;Dbxref=NCBI_GP:MDB8827663.1;Name=MDB8827663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845388.1;locus_tag=PN289_03250;product=hypothetical protein;protein_id=MDB8827663.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 62914 64401 . + . ID=gene-PN289_03255;Name=PN289_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03255 JAQMMZ010000004.1 Protein Homology CDS 62914 64401 . + 0 ID=cds-MDB8827664.1;Parent=gene-PN289_03255;Dbxref=NCBI_GP:MDB8827664.1;Name=MDB8827664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842785.1;locus_tag=PN289_03255;product=stalk domain-containing protein;protein_id=MDB8827664.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 64584 66431 . + . ID=gene-PN289_03260;Name=PN289_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03260 JAQMMZ010000004.1 Protein Homology CDS 64584 66431 . + 0 ID=cds-MDB8827665.1;Parent=gene-PN289_03260;Dbxref=NCBI_GP:MDB8827665.1;Name=MDB8827665.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595491.1;locus_tag=PN289_03260;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDB8827665.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 66643 67758 . + . ID=gene-PN289_03265;Name=PN289_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03265 JAQMMZ010000004.1 Protein Homology CDS 66643 67758 . + 0 ID=cds-MDB8827666.1;Parent=gene-PN289_03265;Dbxref=NCBI_GP:MDB8827666.1;Name=MDB8827666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842834.1;locus_tag=PN289_03265;product=cell wall-binding repeat-containing protein;protein_id=MDB8827666.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 67774 68436 . + . ID=gene-PN289_03270;Name=PN289_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03270 JAQMMZ010000004.1 Protein Homology CDS 67774 68436 . + 0 ID=cds-MDB8827667.1;Parent=gene-PN289_03270;Dbxref=NCBI_GP:MDB8827667.1;Name=MDB8827667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845380.1;locus_tag=PN289_03270;product=sugar transferase;protein_id=MDB8827667.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 68450 69220 . + . ID=gene-PN289_03275;Name=PN289_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03275 JAQMMZ010000004.1 Protein Homology CDS 68450 69220 . + 0 ID=cds-MDB8827668.1;Parent=gene-PN289_03275;Dbxref=NCBI_GP:MDB8827668.1;Name=MDB8827668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842838.1;locus_tag=PN289_03275;product=glycosyltransferase family 2 protein;protein_id=MDB8827668.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 69320 70132 . + . ID=gene-PN289_03280;Name=PN289_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03280 JAQMMZ010000004.1 Protein Homology CDS 69320 70132 . + 0 ID=cds-MDB8827669.1;Parent=gene-PN289_03280;Dbxref=NCBI_GP:MDB8827669.1;Name=MDB8827669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842845.1;locus_tag=PN289_03280;product=glycosyltransferase family 2 protein;protein_id=MDB8827669.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 70153 71340 . + . ID=gene-PN289_03285;Name=PN289_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03285 JAQMMZ010000004.1 Protein Homology CDS 70153 71340 . + 0 ID=cds-MDB8827670.1;Parent=gene-PN289_03285;Dbxref=NCBI_GP:MDB8827670.1;Name=MDB8827670.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842837.1;locus_tag=PN289_03285;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=MDB8827670.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 71428 72522 . + . ID=gene-PN289_03290;Name=PN289_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03290 JAQMMZ010000004.1 Protein Homology CDS 71428 72522 . + 0 ID=cds-MDB8827671.1;Parent=gene-PN289_03290;Dbxref=NCBI_GP:MDB8827671.1;Name=MDB8827671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842833.1;locus_tag=PN289_03290;product=hypothetical protein;protein_id=MDB8827671.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 72581 73354 . + . ID=gene-PN289_03295;Name=PN289_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03295 JAQMMZ010000004.1 Protein Homology CDS 72581 73354 . + 0 ID=cds-MDB8827672.1;Parent=gene-PN289_03295;Dbxref=NCBI_GP:MDB8827672.1;Name=MDB8827672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842843.1;locus_tag=PN289_03295;product=glycosyltransferase family 2 protein;protein_id=MDB8827672.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 73382 74677 . + . ID=gene-PN289_03300;Name=PN289_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03300 JAQMMZ010000004.1 Protein Homology CDS 73382 74677 . + 0 ID=cds-MDB8827673.1;Parent=gene-PN289_03300;Dbxref=NCBI_GP:MDB8827673.1;Name=MDB8827673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842842.1;locus_tag=PN289_03300;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=MDB8827673.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 74745 76190 . + . ID=gene-PN289_03305;Name=PN289_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03305 JAQMMZ010000004.1 Protein Homology CDS 74745 76190 . + 0 ID=cds-MDB8827674.1;Parent=gene-PN289_03305;Dbxref=NCBI_GP:MDB8827674.1;Name=MDB8827674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845376.1;locus_tag=PN289_03305;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=MDB8827674.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 76206 77765 . + . ID=gene-PN289_03310;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PN289_03310 JAQMMZ010000004.1 Protein Homology CDS 76206 77765 . + 0 ID=cds-MDB8827675.1;Parent=gene-PN289_03310;Dbxref=NCBI_GP:MDB8827675.1;Name=MDB8827675.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842832.1;locus_tag=PN289_03310;product=murein biosynthesis integral membrane protein MurJ;protein_id=MDB8827675.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 77875 79347 . + . ID=gene-PN289_03315;Name=PN289_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03315 JAQMMZ010000004.1 Protein Homology CDS 77875 79347 . + 0 ID=cds-MDB8827676.1;Parent=gene-PN289_03315;Dbxref=NCBI_GP:MDB8827676.1;Name=MDB8827676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595493.1;locus_tag=PN289_03315;product=NlpC/P60 family protein;protein_id=MDB8827676.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 79695 81821 . + . ID=gene-PN289_03320;Name=PN289_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03320 JAQMMZ010000004.1 Protein Homology CDS 79695 81821 . + 0 ID=cds-MDB8827677.1;Parent=gene-PN289_03320;Dbxref=NCBI_GP:MDB8827677.1;Name=MDB8827677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842835.1;locus_tag=PN289_03320;product=family 10 glycosylhydrolase;protein_id=MDB8827677.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 81924 83261 . + . ID=gene-PN289_03325;Name=PN289_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03325 JAQMMZ010000004.1 Protein Homology CDS 81924 83261 . + 0 ID=cds-MDB8827678.1;Parent=gene-PN289_03325;Dbxref=NCBI_GP:MDB8827678.1;Name=MDB8827678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842840.1;locus_tag=PN289_03325;product=sodium:alanine symporter family protein;protein_id=MDB8827678.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 83370 84338 . - . ID=gene-PN289_03330;Name=PN289_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03330 JAQMMZ010000004.1 Protein Homology CDS 83370 84338 . - 0 ID=cds-MDB8827679.1;Parent=gene-PN289_03330;Dbxref=NCBI_GP:MDB8827679.1;Name=MDB8827679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845225.1;locus_tag=PN289_03330;product=LCP family protein;protein_id=MDB8827679.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 84602 85648 . - . ID=gene-PN289_03335;Name=PN289_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03335 JAQMMZ010000004.1 Protein Homology CDS 84602 85648 . - 0 ID=cds-MDB8827680.1;Parent=gene-PN289_03335;Dbxref=NCBI_GP:MDB8827680.1;Name=MDB8827680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843798.1;locus_tag=PN289_03335;product=LCP family protein;protein_id=MDB8827680.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 85829 86617 . + . ID=gene-PN289_03340;Name=PN289_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03340 JAQMMZ010000004.1 Protein Homology CDS 85829 86617 . + 0 ID=cds-MDB8827681.1;Parent=gene-PN289_03340;Dbxref=NCBI_GP:MDB8827681.1;Name=MDB8827681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843786.1;locus_tag=PN289_03340;product=HAD family hydrolase;protein_id=MDB8827681.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 86651 87637 . + . ID=gene-PN289_03345;Name=PN289_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03345 JAQMMZ010000004.1 Protein Homology CDS 86651 87637 . + 0 ID=cds-MDB8827682.1;Parent=gene-PN289_03345;Dbxref=NCBI_GP:MDB8827682.1;Name=MDB8827682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843791.1;locus_tag=PN289_03345;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDB8827682.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 87801 88064 . + . ID=gene-PN289_03350;Name=PN289_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03350 JAQMMZ010000004.1 Protein Homology CDS 87801 88064 . + 0 ID=cds-MDB8827683.1;Parent=gene-PN289_03350;Dbxref=NCBI_GP:MDB8827683.1;Name=MDB8827683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845223.1;locus_tag=PN289_03350;product=HPr family phosphocarrier protein;protein_id=MDB8827683.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 88218 89933 . + . ID=gene-PN289_03355;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PN289_03355 JAQMMZ010000004.1 Protein Homology CDS 88218 89933 . + 0 ID=cds-MDB8827684.1;Parent=gene-PN289_03355;Dbxref=NCBI_GP:MDB8827684.1;Name=MDB8827684.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595257.1;locus_tag=PN289_03355;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=MDB8827684.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 90555 91211 . + . ID=gene-PN289_03360;Name=PN289_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03360 JAQMMZ010000004.1 Protein Homology CDS 90555 91211 . + 0 ID=cds-MDB8827685.1;Parent=gene-PN289_03360;Dbxref=NCBI_GP:MDB8827685.1;Name=MDB8827685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843749.1;locus_tag=PN289_03360;product=hypothetical protein;protein_id=MDB8827685.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 91385 92563 . - . ID=gene-PN289_03365;Name=PN289_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03365 JAQMMZ010000004.1 Protein Homology CDS 91385 92563 . - 0 ID=cds-MDB8827686.1;Parent=gene-PN289_03365;Dbxref=NCBI_GP:MDB8827686.1;Name=MDB8827686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843796.1;locus_tag=PN289_03365;product=cation:proton antiporter;protein_id=MDB8827686.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 92724 93722 . - . ID=gene-PN289_03370;Name=PN289_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03370 JAQMMZ010000004.1 Protein Homology CDS 92724 93722 . - 0 ID=cds-MDB8827687.1;Parent=gene-PN289_03370;Dbxref=NCBI_GP:MDB8827687.1;Name=MDB8827687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845218.1;locus_tag=PN289_03370;product=hypothetical protein;protein_id=MDB8827687.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 94052 95425 . + . ID=gene-PN289_03375;Name=scfB;gbkey=Gene;gene=scfB;gene_biotype=protein_coding;locus_tag=PN289_03375 JAQMMZ010000004.1 Protein Homology CDS 94052 95425 . + 0 ID=cds-MDB8827688.1;Parent=gene-PN289_03375;Dbxref=NCBI_GP:MDB8827688.1;Name=MDB8827688.1;Ontology_term=GO:0031179,GO:0051539,GO:1904047;gbkey=CDS;gene=scfB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptide modification|0031179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595258.1;locus_tag=PN289_03375;product=thioether cross-link-forming SCIFF peptide maturase;protein_id=MDB8827688.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 95465 97132 . + . ID=gene-PN289_03380;Name=PN289_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03380 JAQMMZ010000004.1 Protein Homology CDS 95465 97132 . + 0 ID=cds-MDB8827689.1;Parent=gene-PN289_03380;Dbxref=NCBI_GP:MDB8827689.1;Name=MDB8827689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843730.1;locus_tag=PN289_03380;product=AarF/UbiB family protein;protein_id=MDB8827689.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 97235 99682 . + . ID=gene-PN289_03385;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PN289_03385 JAQMMZ010000004.1 Protein Homology CDS 97235 99682 . + 0 ID=cds-MDB8827690.1;Parent=gene-PN289_03385;Dbxref=NCBI_GP:MDB8827690.1;Name=MDB8827690.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843850.1;locus_tag=PN289_03385;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=MDB8827690.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 99697 100218 . + . ID=gene-PN289_03390;Name=PN289_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03390 JAQMMZ010000004.1 Protein Homology CDS 99697 100218 . + 0 ID=cds-MDB8827691.1;Parent=gene-PN289_03390;Dbxref=NCBI_GP:MDB8827691.1;Name=MDB8827691.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843852.1;locus_tag=PN289_03390;product=adenine phosphoribosyltransferase;protein_id=MDB8827691.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 100300 102519 . + . ID=gene-PN289_03395;Name=PN289_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03395 JAQMMZ010000004.1 Protein Homology CDS 100300 102519 . + 0 ID=cds-MDB8827692.1;Parent=gene-PN289_03395;Dbxref=NCBI_GP:MDB8827692.1;Name=MDB8827692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843834.1;locus_tag=PN289_03395;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=MDB8827692.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 102529 102978 . + . ID=gene-PN289_03400;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PN289_03400 JAQMMZ010000004.1 Protein Homology CDS 102529 102978 . + 0 ID=cds-MDB8827693.1;Parent=gene-PN289_03400;Dbxref=NCBI_GP:MDB8827693.1;Name=MDB8827693.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003517065.1;locus_tag=PN289_03400;product=D-aminoacyl-tRNA deacylase;protein_id=MDB8827693.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 102988 103614 . + . ID=gene-PN289_03405;Name=PN289_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03405 JAQMMZ010000004.1 Protein Homology CDS 102988 103614 . + 0 ID=cds-MDB8827694.1;Parent=gene-PN289_03405;Dbxref=NCBI_GP:MDB8827694.1;Name=MDB8827694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843782.1;locus_tag=PN289_03405;product=MBL fold metallo-hydrolase;protein_id=MDB8827694.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 103621 105192 . + . ID=gene-PN289_03410;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=PN289_03410 JAQMMZ010000004.1 Protein Homology CDS 103621 105192 . + 0 ID=cds-MDB8827695.1;Parent=gene-PN289_03410;Dbxref=NCBI_GP:MDB8827695.1;Name=MDB8827695.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemZ;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845204.1;locus_tag=PN289_03410;product=coproporphyrinogen dehydrogenase HemZ;protein_id=MDB8827695.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 105182 106444 . + . ID=gene-PN289_03415;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PN289_03415 JAQMMZ010000004.1 Protein Homology CDS 105182 106444 . + 0 ID=cds-MDB8827696.1;Parent=gene-PN289_03415;Dbxref=NCBI_GP:MDB8827696.1;Name=MDB8827696.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003422928.1;locus_tag=PN289_03415;product=histidine--tRNA ligase;protein_id=MDB8827696.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 106456 108237 . + . ID=gene-PN289_03420;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PN289_03420 JAQMMZ010000004.1 Protein Homology CDS 106456 108237 . + 0 ID=cds-MDB8827697.1;Parent=gene-PN289_03420;Dbxref=NCBI_GP:MDB8827697.1;Name=MDB8827697.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595261.1;locus_tag=PN289_03420;product=aspartate--tRNA ligase;protein_id=MDB8827697.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 108286 108603 . + . ID=gene-PN289_03425;Name=PN289_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03425 JAQMMZ010000004.1 Protein Homology CDS 108286 108603 . + 0 ID=cds-MDB8827698.1;Parent=gene-PN289_03425;Dbxref=NCBI_GP:MDB8827698.1;Name=MDB8827698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845201.1;locus_tag=PN289_03425;product=metal-sensitive transcriptional regulator;protein_id=MDB8827698.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 108639 109097 . + . ID=gene-PN289_03430;Name=PN289_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03430 JAQMMZ010000004.1 Protein Homology CDS 108639 109097 . + 0 ID=cds-MDB8827699.1;Parent=gene-PN289_03430;Dbxref=NCBI_GP:MDB8827699.1;Name=MDB8827699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843838.1;locus_tag=PN289_03430;product=SoxR reducing system RseC family protein;protein_id=MDB8827699.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 109140 110108 . + . ID=gene-PN289_03435;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PN289_03435 JAQMMZ010000004.1 Protein Homology CDS 109140 110108 . + 0 ID=cds-MDB8827700.1;Parent=gene-PN289_03435;Dbxref=NCBI_GP:MDB8827700.1;Name=MDB8827700.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845199.1;locus_tag=PN289_03435;product=phosphate acetyltransferase;protein_id=MDB8827700.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 110341 112044 . + . ID=gene-PN289_03440;Name=PN289_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03440 JAQMMZ010000004.1 GeneMarkS-2+ CDS 110341 112044 . + 0 ID=cds-MDB8827701.1;Parent=gene-PN289_03440;Dbxref=NCBI_GP:MDB8827701.1;Name=MDB8827701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_03440;product=hypothetical protein;protein_id=MDB8827701.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 112008 115790 . + . ID=gene-PN289_03445;Name=PN289_03445;end_range=115790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03445;partial=true JAQMMZ010000004.1 GeneMarkS-2+ CDS 112008 115790 . + 0 ID=cds-MDB8827702.1;Parent=gene-PN289_03445;Dbxref=NCBI_GP:MDB8827702.1;Name=MDB8827702.1;end_range=115790,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_03445;partial=true;product=InlB B-repeat-containing protein;protein_id=MDB8827702.1;transl_table=11 JAQMMZ010000004.1 Genbank gene 115890 119519 . + . ID=gene-PN289_03450;Name=PN289_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03450;partial=true;start_range=.,115890 JAQMMZ010000004.1 Protein Homology CDS 115890 119519 . + 0 ID=cds-MDB8827703.1;Parent=gene-PN289_03450;Dbxref=NCBI_GP:MDB8827703.1;Name=MDB8827703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843778.1;locus_tag=PN289_03450;partial=true;product=cell wall-binding repeat-containing protein;protein_id=MDB8827703.1;start_range=.,115890;transl_table=11 ##sequence-region JAQMMZ010000005.1 1 110825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000005.1 Genbank region 1 110825 . + . ID=JAQMMZ010000005.1:1..110825;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000005.1 Genbank gene 180 1220 . - . ID=gene-PN289_03455;Name=PN289_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03455 JAQMMZ010000005.1 Protein Homology CDS 180 1220 . - 0 ID=cds-MDB8827704.1;Parent=gene-PN289_03455;Dbxref=NCBI_GP:MDB8827704.1;Name=MDB8827704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842901.1;locus_tag=PN289_03455;product=GTP-binding protein;protein_id=MDB8827704.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 1375 3024 . + . ID=gene-PN289_03460;Name=PN289_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03460 JAQMMZ010000005.1 Protein Homology CDS 1375 3024 . + 0 ID=cds-MDB8827705.1;Parent=gene-PN289_03460;Dbxref=NCBI_GP:MDB8827705.1;Name=MDB8827705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843044.1;locus_tag=PN289_03460;product=permease;protein_id=MDB8827705.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 3017 3763 . + . ID=gene-PN289_03465;Name=PN289_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03465 JAQMMZ010000005.1 Protein Homology CDS 3017 3763 . + 0 ID=cds-MDB8827706.1;Parent=gene-PN289_03465;Dbxref=NCBI_GP:MDB8827706.1;Name=MDB8827706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842887.1;locus_tag=PN289_03465;product=TIGR03943 family protein;protein_id=MDB8827706.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 3952 6417 . + . ID=gene-PN289_03470;Name=PN289_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03470 JAQMMZ010000005.1 Protein Homology CDS 3952 6417 . + 0 ID=cds-MDB8827707.1;Parent=gene-PN289_03470;Dbxref=NCBI_GP:MDB8827707.1;Name=MDB8827707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595364.1;locus_tag=PN289_03470;product=cell wall-binding repeat-containing protein;protein_id=MDB8827707.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 6437 7840 . + . ID=gene-PN289_03475;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PN289_03475 JAQMMZ010000005.1 Protein Homology CDS 6437 7840 . + 0 ID=cds-MDB8827708.1;Parent=gene-PN289_03475;Dbxref=NCBI_GP:MDB8827708.1;Name=MDB8827708.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842983.1;locus_tag=PN289_03475;product=cysteine--tRNA ligase;protein_id=MDB8827708.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 7825 8232 . + . ID=gene-PN289_03480;Name=PN289_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03480 JAQMMZ010000005.1 Protein Homology CDS 7825 8232 . + 0 ID=cds-MDB8827709.1;Parent=gene-PN289_03480;Dbxref=NCBI_GP:MDB8827709.1;Name=MDB8827709.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842866.1;locus_tag=PN289_03480;product=ribonuclease III domain-containing protein;protein_id=MDB8827709.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 8245 8979 . + . ID=gene-PN289_03485;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PN289_03485 JAQMMZ010000005.1 Protein Homology CDS 8245 8979 . + 0 ID=cds-MDB8827710.1;Parent=gene-PN289_03485;Dbxref=NCBI_GP:MDB8827710.1;Name=MDB8827710.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846462.1;locus_tag=PN289_03485;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=MDB8827710.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 8945 9505 . + . ID=gene-PN289_03490;Name=PN289_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03490 JAQMMZ010000005.1 Protein Homology CDS 8945 9505 . + 0 ID=cds-MDB8827711.1;Parent=gene-PN289_03490;Dbxref=NCBI_GP:MDB8827711.1;Name=MDB8827711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843075.1;locus_tag=PN289_03490;product=NYN domain-containing protein;protein_id=MDB8827711.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 9523 10176 . + . ID=gene-PN289_03495;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=PN289_03495 JAQMMZ010000005.1 Protein Homology CDS 9523 10176 . + 0 ID=cds-MDB8827712.1;Parent=gene-PN289_03495;Dbxref=NCBI_GP:MDB8827712.1;Name=MDB8827712.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846464.1;locus_tag=PN289_03495;product=RNA polymerase sporulation sigma factor SigH;protein_id=MDB8827712.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 10335 10408 . - . ID=gene-PN289_03500;Name=PN289_03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=PN289_03500 JAQMMZ010000005.1 tRNAscan-SE tRNA 10335 10408 . - . ID=rna-PN289_03500;Parent=gene-PN289_03500;anticodon=(pos:complement(10372..10374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_03500;product=tRNA-Arg JAQMMZ010000005.1 tRNAscan-SE exon 10335 10408 . - . ID=exon-PN289_03500-1;Parent=rna-PN289_03500;anticodon=(pos:complement(10372..10374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PN289_03500;product=tRNA-Arg JAQMMZ010000005.1 Genbank gene 10555 11877 . + . ID=gene-PN289_03505;Name=PN289_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03505 JAQMMZ010000005.1 Protein Homology CDS 10555 11877 . + 0 ID=cds-MDB8827713.1;Parent=gene-PN289_03505;Dbxref=NCBI_GP:MDB8827713.1;Name=MDB8827713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846465.1;locus_tag=PN289_03505;product=metallophosphoesterase;protein_id=MDB8827713.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 12301 14934 . + . ID=gene-PN289_03510;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=PN289_03510 JAQMMZ010000005.1 Protein Homology CDS 12301 14934 . + 0 ID=cds-MDB8827714.1;Parent=gene-PN289_03510;Dbxref=NCBI_GP:MDB8827714.1;Name=MDB8827714.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843033.1;locus_tag=PN289_03510;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=MDB8827714.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 15286 17073 . + . ID=gene-PN289_03515;Name=PN289_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03515 JAQMMZ010000005.1 Protein Homology CDS 15286 17073 . + 0 ID=cds-MDB8827715.1;Parent=gene-PN289_03515;Dbxref=NCBI_GP:MDB8827715.1;Name=MDB8827715.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843063.1;locus_tag=PN289_03515;product=thiamine pyrophosphate-dependent enzyme;protein_id=MDB8827715.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 17093 17677 . + . ID=gene-PN289_03520;Name=PN289_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03520 JAQMMZ010000005.1 Protein Homology CDS 17093 17677 . + 0 ID=cds-MDB8827716.1;Parent=gene-PN289_03520;Dbxref=NCBI_GP:MDB8827716.1;Name=MDB8827716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842870.1;locus_tag=PN289_03520;product=indolepyruvate oxidoreductase subunit beta;protein_id=MDB8827716.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 17865 18305 . - . ID=gene-PN289_03525;Name=PN289_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03525 JAQMMZ010000005.1 Protein Homology CDS 17865 18305 . - 0 ID=cds-MDB8827717.1;Parent=gene-PN289_03525;Dbxref=NCBI_GP:MDB8827717.1;Name=MDB8827717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846470.1;locus_tag=PN289_03525;product=hypothetical protein;protein_id=MDB8827717.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 18435 18743 . - . ID=gene-PN289_03530;Name=PN289_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03530 JAQMMZ010000005.1 Protein Homology CDS 18435 18743 . - 0 ID=cds-MDB8827718.1;Parent=gene-PN289_03530;Dbxref=NCBI_GP:MDB8827718.1;Name=MDB8827718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846471.1;locus_tag=PN289_03530;product=hypothetical protein;protein_id=MDB8827718.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 19003 19710 . + . ID=gene-PN289_03535;Name=PN289_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03535 JAQMMZ010000005.1 Protein Homology CDS 19003 19710 . + 0 ID=cds-MDB8827719.1;Parent=gene-PN289_03535;Dbxref=NCBI_GP:MDB8827719.1;Name=MDB8827719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842916.1;locus_tag=PN289_03535;product=response regulator transcription factor;protein_id=MDB8827719.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 19843 20400 . + . ID=gene-PN289_03540;Name=PN289_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03540 JAQMMZ010000005.1 Protein Homology CDS 19843 20400 . + 0 ID=cds-MDB8827720.1;Parent=gene-PN289_03540;Dbxref=NCBI_GP:MDB8827720.1;Name=MDB8827720.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842925.1;locus_tag=PN289_03540;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827720.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 20424 20756 . + . ID=gene-PN289_03545;Name=PN289_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03545 JAQMMZ010000005.1 Protein Homology CDS 20424 20756 . + 0 ID=cds-MDB8827721.1;Parent=gene-PN289_03545;Dbxref=NCBI_GP:MDB8827721.1;Name=MDB8827721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843045.1;locus_tag=PN289_03545;product=bacitracin ABC transporter ATP-binding protein;protein_id=MDB8827721.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 20749 21585 . + . ID=gene-PN289_03550;Name=PN289_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03550 JAQMMZ010000005.1 Protein Homology CDS 20749 21585 . + 0 ID=cds-MDB8827722.1;Parent=gene-PN289_03550;Dbxref=NCBI_GP:MDB8827722.1;Name=MDB8827722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846472.1;locus_tag=PN289_03550;product=ABC transporter permease;protein_id=MDB8827722.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 21624 22568 . + . ID=gene-PN289_03555;Name=PN289_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03555 JAQMMZ010000005.1 Protein Homology CDS 21624 22568 . + 0 ID=cds-MDB8827723.1;Parent=gene-PN289_03555;Dbxref=NCBI_GP:MDB8827723.1;Name=MDB8827723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842974.1;locus_tag=PN289_03555;product=HAMP domain-containing sensor histidine kinase;protein_id=MDB8827723.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 22655 23194 . - . ID=gene-PN289_03560;Name=PN289_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03560 JAQMMZ010000005.1 Protein Homology CDS 22655 23194 . - 0 ID=cds-MDB8827724.1;Parent=gene-PN289_03560;Dbxref=NCBI_GP:MDB8827724.1;Name=MDB8827724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842849.1;locus_tag=PN289_03560;product=hypothetical protein;protein_id=MDB8827724.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 23222 23767 . - . ID=gene-PN289_03565;Name=PN289_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03565 JAQMMZ010000005.1 GeneMarkS-2+ CDS 23222 23767 . - 0 ID=cds-MDB8827725.1;Parent=gene-PN289_03565;Dbxref=NCBI_GP:MDB8827725.1;Name=MDB8827725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_03565;product=hypothetical protein;protein_id=MDB8827725.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 23935 25230 . - . ID=gene-PN289_03570;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=PN289_03570 JAQMMZ010000005.1 Protein Homology CDS 23935 25230 . - 0 ID=cds-MDB8827726.1;Parent=gene-PN289_03570;Dbxref=NCBI_GP:MDB8827726.1;Name=MDB8827726.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846474.1;locus_tag=PN289_03570;product=diaminopimelate decarboxylase;protein_id=MDB8827726.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 25254 26372 . - . ID=gene-PN289_03575;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PN289_03575 JAQMMZ010000005.1 Protein Homology CDS 25254 26372 . - 0 ID=cds-MDB8827727.1;Parent=gene-PN289_03575;Dbxref=NCBI_GP:MDB8827727.1;Name=MDB8827727.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846475.1;locus_tag=PN289_03575;product=alanine racemase;protein_id=MDB8827727.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 26392 27549 . - . ID=gene-PN289_03580;Name=PN289_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03580 JAQMMZ010000005.1 Protein Homology CDS 26392 27549 . - 0 ID=cds-MDB8827728.1;Parent=gene-PN289_03580;Dbxref=NCBI_GP:MDB8827728.1;Name=MDB8827728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842872.1;locus_tag=PN289_03580;product=M20 family metallopeptidase;protein_id=MDB8827728.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 27718 28437 . - . ID=gene-PN289_03585;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PN289_03585 JAQMMZ010000005.1 Protein Homology CDS 27718 28437 . - 0 ID=cds-MDB8827729.1;Parent=gene-PN289_03585;Dbxref=NCBI_GP:MDB8827729.1;Name=MDB8827729.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846477.1;locus_tag=PN289_03585;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=MDB8827729.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 28460 28660 . - . ID=gene-PN289_03590;Name=PN289_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03590 JAQMMZ010000005.1 Protein Homology CDS 28460 28660 . - 0 ID=cds-MDB8827730.1;Parent=gene-PN289_03590;Dbxref=NCBI_GP:MDB8827730.1;Name=MDB8827730.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846478.1;locus_tag=PN289_03590;product=dihydrodipicolinate synthase family protein;protein_id=MDB8827730.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 28801 29784 . - . ID=gene-PN289_03595;Name=PN289_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03595 JAQMMZ010000005.1 Protein Homology CDS 28801 29784 . - 0 ID=cds-MDB8827731.1;Parent=gene-PN289_03595;Dbxref=NCBI_GP:MDB8827731.1;Name=MDB8827731.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846479.1;locus_tag=PN289_03595;product=aspartate-semialdehyde dehydrogenase;protein_id=MDB8827731.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 29875 31080 . - . ID=gene-PN289_03600;Name=PN289_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03600 JAQMMZ010000005.1 Protein Homology CDS 29875 31080 . - 0 ID=cds-MDB8827732.1;Parent=gene-PN289_03600;Dbxref=NCBI_GP:MDB8827732.1;Name=MDB8827732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595366.1;locus_tag=PN289_03600;product=aspartate kinase;protein_id=MDB8827732.1;transl_table=11 JAQMMZ010000005.1 cmsearch riboswitch 31189 31365 . - . ID=id-JAQMMZ010000005.1:31189..31365;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000005.1 cmsearch binding_site 31656 31915 . + . ID=id-JAQMMZ010000005.1:31656..31915;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000005.1 Genbank gene 32061 33116 . + . ID=gene-PN289_03605;Name=PN289_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03605 JAQMMZ010000005.1 Protein Homology CDS 32061 33116 . + 0 ID=cds-MDB8827733.1;Parent=gene-PN289_03605;Dbxref=NCBI_GP:MDB8827733.1;Name=MDB8827733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842852.1;locus_tag=PN289_03605;product=methionine ABC transporter ATP-binding protein;protein_id=MDB8827733.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 33103 33768 . + . ID=gene-PN289_03610;Name=PN289_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03610 JAQMMZ010000005.1 Protein Homology CDS 33103 33768 . + 0 ID=cds-MDB8827734.1;Parent=gene-PN289_03610;Dbxref=NCBI_GP:MDB8827734.1;Name=MDB8827734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843022.1;locus_tag=PN289_03610;product=ABC transporter permease;protein_id=MDB8827734.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 33953 34795 . + . ID=gene-PN289_03615;Name=PN289_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03615 JAQMMZ010000005.1 Protein Homology CDS 33953 34795 . + 0 ID=cds-MDB8827735.1;Parent=gene-PN289_03615;Dbxref=NCBI_GP:MDB8827735.1;Name=MDB8827735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846483.1;locus_tag=PN289_03615;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=MDB8827735.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 34927 36192 . + . ID=gene-PN289_03620;Name=PN289_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03620 JAQMMZ010000005.1 Protein Homology CDS 34927 36192 . + 0 ID=cds-MDB8827736.1;Parent=gene-PN289_03620;Dbxref=NCBI_GP:MDB8827736.1;Name=MDB8827736.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842884.1;locus_tag=PN289_03620;product=amidohydrolase;protein_id=MDB8827736.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 36739 37050 . + . ID=gene-PN289_03625;Name=PN289_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03625 JAQMMZ010000005.1 Protein Homology CDS 36739 37050 . + 0 ID=cds-MDB8827737.1;Parent=gene-PN289_03625;Dbxref=NCBI_GP:MDB8827737.1;Name=MDB8827737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843059.1;locus_tag=PN289_03625;product=hypothetical protein;protein_id=MDB8827737.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 37115 39025 . + . ID=gene-PN289_03630;Name=PN289_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03630 JAQMMZ010000005.1 Protein Homology CDS 37115 39025 . + 0 ID=cds-MDB8827738.1;Parent=gene-PN289_03630;Dbxref=NCBI_GP:MDB8827738.1;Name=MDB8827738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595368.1;locus_tag=PN289_03630;product=V-type ATP synthase subunit I;protein_id=MDB8827738.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 39212 39697 . + . ID=gene-PN289_03635;Name=PN289_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03635 JAQMMZ010000005.1 Protein Homology CDS 39212 39697 . + 0 ID=cds-MDB8827739.1;Parent=gene-PN289_03635;Dbxref=NCBI_GP:MDB8827739.1;Name=MDB8827739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843018.1;locus_tag=PN289_03635;product=V-type ATP synthase subunit K;protein_id=MDB8827739.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 39735 40280 . + . ID=gene-PN289_03640;Name=PN289_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03640 JAQMMZ010000005.1 Protein Homology CDS 39735 40280 . + 0 ID=cds-MDB8827740.1;Parent=gene-PN289_03640;Dbxref=NCBI_GP:MDB8827740.1;Name=MDB8827740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842933.1;locus_tag=PN289_03640;product=V-type ATP synthase subunit E;protein_id=MDB8827740.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 40291 41292 . + . ID=gene-PN289_03645;Name=PN289_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03645 JAQMMZ010000005.1 Protein Homology CDS 40291 41292 . + 0 ID=cds-MDB8827741.1;Parent=gene-PN289_03645;Dbxref=NCBI_GP:MDB8827741.1;Name=MDB8827741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846490.1;locus_tag=PN289_03645;product=V-type ATP synthase subunit C;protein_id=MDB8827741.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 41292 41615 . + . ID=gene-PN289_03650;Name=PN289_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03650 JAQMMZ010000005.1 Protein Homology CDS 41292 41615 . + 0 ID=cds-MDB8827742.1;Parent=gene-PN289_03650;Dbxref=NCBI_GP:MDB8827742.1;Name=MDB8827742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843068.1;locus_tag=PN289_03650;product=V-type ATP synthase subunit F;protein_id=MDB8827742.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 41632 43407 . + . ID=gene-PN289_03655;Name=PN289_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03655 JAQMMZ010000005.1 Protein Homology CDS 41632 43407 . + 0 ID=cds-MDB8827743.1;Parent=gene-PN289_03655;Dbxref=NCBI_GP:MDB8827743.1;Name=MDB8827743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843065.1;locus_tag=PN289_03655;product=V-type ATP synthase subunit A;protein_id=MDB8827743.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 43400 44785 . + . ID=gene-PN289_03660;Name=PN289_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03660 JAQMMZ010000005.1 Protein Homology CDS 43400 44785 . + 0 ID=cds-MDB8827744.1;Parent=gene-PN289_03660;Dbxref=NCBI_GP:MDB8827744.1;Name=MDB8827744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846491.1;locus_tag=PN289_03660;product=V-type ATP synthase subunit B;protein_id=MDB8827744.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 44787 45422 . + . ID=gene-PN289_03665;Name=PN289_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03665 JAQMMZ010000005.1 Protein Homology CDS 44787 45422 . + 0 ID=cds-MDB8827745.1;Parent=gene-PN289_03665;Dbxref=NCBI_GP:MDB8827745.1;Name=MDB8827745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842976.1;locus_tag=PN289_03665;product=V-type ATP synthase subunit D;protein_id=MDB8827745.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 45709 46644 . + . ID=gene-PN289_03670;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PN289_03670 JAQMMZ010000005.1 Protein Homology CDS 45709 46644 . + 0 ID=cds-MDB8827746.1;Parent=gene-PN289_03670;Dbxref=NCBI_GP:MDB8827746.1;Name=MDB8827746.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846493.1;locus_tag=PN289_03670;product=quinolinate synthase NadA;protein_id=MDB8827746.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 46646 47956 . + . ID=gene-PN289_03675;Name=PN289_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03675 JAQMMZ010000005.1 Protein Homology CDS 46646 47956 . + 0 ID=cds-MDB8827747.1;Parent=gene-PN289_03675;Dbxref=NCBI_GP:MDB8827747.1;Name=MDB8827747.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843087.1;locus_tag=PN289_03675;product=L-aspartate oxidase;protein_id=MDB8827747.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 47925 48773 . + . ID=gene-PN289_03680;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PN289_03680 JAQMMZ010000005.1 Protein Homology CDS 47925 48773 . + 0 ID=cds-MDB8827748.1;Parent=gene-PN289_03680;Dbxref=NCBI_GP:MDB8827748.1;Name=MDB8827748.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842952.1;locus_tag=PN289_03680;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=MDB8827748.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 48909 49070 . + . ID=gene-PN289_03685;Name=PN289_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03685 JAQMMZ010000005.1 Protein Homology CDS 48909 49070 . + 0 ID=cds-MDB8827749.1;Parent=gene-PN289_03685;Dbxref=NCBI_GP:MDB8827749.1;Name=MDB8827749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843017.1;locus_tag=PN289_03685;product=hypothetical protein;protein_id=MDB8827749.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 49197 49847 . - . ID=gene-PN289_03690;Name=PN289_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03690 JAQMMZ010000005.1 Protein Homology CDS 49197 49847 . - 0 ID=cds-MDB8827750.1;Parent=gene-PN289_03690;Dbxref=NCBI_GP:MDB8827750.1;Name=MDB8827750.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842986.1;locus_tag=PN289_03690;product=hemolysin III family protein;protein_id=MDB8827750.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 49896 50885 . - . ID=gene-PN289_03695;Name=PN289_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03695 JAQMMZ010000005.1 Protein Homology CDS 49896 50885 . - 0 ID=cds-MDB8827751.1;Parent=gene-PN289_03695;Dbxref=NCBI_GP:MDB8827751.1;Name=MDB8827751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595370.1;locus_tag=PN289_03695;product=NADH:flavin oxidoreductase;protein_id=MDB8827751.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 51145 51438 . + . ID=gene-PN289_03700;Name=PN289_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03700 JAQMMZ010000005.1 Protein Homology CDS 51145 51438 . + 0 ID=cds-MDB8827752.1;Parent=gene-PN289_03700;Dbxref=NCBI_GP:MDB8827752.1;Name=MDB8827752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843070.1;locus_tag=PN289_03700;product=hypothetical protein;protein_id=MDB8827752.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 51583 52983 . + . ID=gene-PN289_03705;Name=PN289_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03705 JAQMMZ010000005.1 Protein Homology CDS 51583 52983 . + 0 ID=cds-MDB8827753.1;Parent=gene-PN289_03705;Dbxref=NCBI_GP:MDB8827753.1;Name=MDB8827753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842898.1;locus_tag=PN289_03705;product=peptide MFS transporter;protein_id=MDB8827753.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 53130 54209 . - . ID=gene-PN289_03710;Name=PN289_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03710 JAQMMZ010000005.1 Protein Homology CDS 53130 54209 . - 0 ID=cds-MDB8827754.1;Parent=gene-PN289_03710;Dbxref=NCBI_GP:MDB8827754.1;Name=MDB8827754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843014.1;locus_tag=PN289_03710;product=aminopeptidase P family protein;protein_id=MDB8827754.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 54551 55513 . + . ID=gene-PN289_03715;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=PN289_03715 JAQMMZ010000005.1 Protein Homology CDS 54551 55513 . + 0 ID=cds-MDB8827755.1;Parent=gene-PN289_03715;Dbxref=NCBI_GP:MDB8827755.1;Name=MDB8827755.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843077.1;locus_tag=PN289_03715;product=prolyl aminopeptidase;protein_id=MDB8827755.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 55527 57317 . + . ID=gene-PN289_03720;Name=PN289_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03720 JAQMMZ010000005.1 Protein Homology CDS 55527 57317 . + 0 ID=cds-MDB8827756.1;Parent=gene-PN289_03720;Dbxref=NCBI_GP:MDB8827756.1;Name=MDB8827756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846500.1;locus_tag=PN289_03720;product=aminopeptidase P family protein;protein_id=MDB8827756.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 57490 57639 . + . ID=gene-PN289_03725;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PN289_03725 JAQMMZ010000005.1 Protein Homology CDS 57490 57639 . + 0 ID=cds-MDB8827757.1;Parent=gene-PN289_03725;Dbxref=NCBI_GP:MDB8827757.1;Name=MDB8827757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402360.1;locus_tag=PN289_03725;product=50S ribosomal protein L33;protein_id=MDB8827757.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 57660 57866 . + . ID=gene-PN289_03730;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PN289_03730 JAQMMZ010000005.1 Protein Homology CDS 57660 57866 . + 0 ID=cds-MDB8827758.1;Parent=gene-PN289_03730;Dbxref=NCBI_GP:MDB8827758.1;Name=MDB8827758.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842917.1;locus_tag=PN289_03730;product=preprotein translocase subunit SecE;protein_id=MDB8827758.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 57894 58436 . + . ID=gene-PN289_03735;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PN289_03735 JAQMMZ010000005.1 Protein Homology CDS 57894 58436 . + 0 ID=cds-MDB8827759.1;Parent=gene-PN289_03735;Dbxref=NCBI_GP:MDB8827759.1;Name=MDB8827759.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421190.1;locus_tag=PN289_03735;product=transcription termination/antitermination protein NusG;protein_id=MDB8827759.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 58451 58876 . + . ID=gene-PN289_03740;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=PN289_03740 JAQMMZ010000005.1 Protein Homology CDS 58451 58876 . + 0 ID=cds-MDB8827760.1;Parent=gene-PN289_03740;Dbxref=NCBI_GP:MDB8827760.1;Name=MDB8827760.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012158357.1;locus_tag=PN289_03740;product=50S ribosomal protein L11;protein_id=MDB8827760.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 59005 59703 . + . ID=gene-PN289_03745;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PN289_03745 JAQMMZ010000005.1 Protein Homology CDS 59005 59703 . + 0 ID=cds-MDB8827761.1;Parent=gene-PN289_03745;Dbxref=NCBI_GP:MDB8827761.1;Name=MDB8827761.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003421188.1;locus_tag=PN289_03745;product=50S ribosomal protein L1;protein_id=MDB8827761.1;transl_table=11 JAQMMZ010000005.1 cmsearch sequence_feature 59753 59876 . + . ID=id-JAQMMZ010000005.1:59753..59876;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000005.1 Genbank gene 59918 60436 . + . ID=gene-PN289_03750;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PN289_03750 JAQMMZ010000005.1 Protein Homology CDS 59918 60436 . + 0 ID=cds-MDB8827762.1;Parent=gene-PN289_03750;Dbxref=NCBI_GP:MDB8827762.1;Name=MDB8827762.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843085.1;locus_tag=PN289_03750;product=50S ribosomal protein L10;protein_id=MDB8827762.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 60545 60910 . + . ID=gene-PN289_03755;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PN289_03755 JAQMMZ010000005.1 Protein Homology CDS 60545 60910 . + 0 ID=cds-MDB8827763.1;Parent=gene-PN289_03755;Dbxref=NCBI_GP:MDB8827763.1;Name=MDB8827763.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842856.1;locus_tag=PN289_03755;product=50S ribosomal protein L7/L12;protein_id=MDB8827763.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 61200 61934 . + . ID=gene-PN289_03760;Name=PN289_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03760 JAQMMZ010000005.1 Protein Homology CDS 61200 61934 . + 0 ID=cds-MDB8827764.1;Parent=gene-PN289_03760;Dbxref=NCBI_GP:MDB8827764.1;Name=MDB8827764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842996.1;locus_tag=PN289_03760;product=GDSL-type esterase/lipase family protein;protein_id=MDB8827764.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 61946 62581 . + . ID=gene-PN289_03765;Name=PN289_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03765 JAQMMZ010000005.1 Protein Homology CDS 61946 62581 . + 0 ID=cds-MDB8827765.1;Parent=gene-PN289_03765;Dbxref=NCBI_GP:MDB8827765.1;Name=MDB8827765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846504.1;locus_tag=PN289_03765;product=DUF4358 domain-containing protein;protein_id=MDB8827765.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 62595 64001 . + . ID=gene-PN289_03770;Name=PN289_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03770 JAQMMZ010000005.1 Protein Homology CDS 62595 64001 . + 0 ID=cds-MDB8827766.1;Parent=gene-PN289_03770;Dbxref=NCBI_GP:MDB8827766.1;Name=MDB8827766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595371.1;locus_tag=PN289_03770;product=MBOAT family protein;protein_id=MDB8827766.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 64019 65692 . + . ID=gene-PN289_03775;Name=PN289_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03775 JAQMMZ010000005.1 Protein Homology CDS 64019 65692 . + 0 ID=cds-MDB8827767.1;Parent=gene-PN289_03775;Dbxref=NCBI_GP:MDB8827767.1;Name=MDB8827767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842889.1;locus_tag=PN289_03775;product=DHHW family protein;protein_id=MDB8827767.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 65795 66100 . - . ID=gene-PN289_03780;Name=PN289_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03780 JAQMMZ010000005.1 Protein Homology CDS 65795 66100 . - 0 ID=cds-MDB8827768.1;Parent=gene-PN289_03780;Dbxref=NCBI_GP:MDB8827768.1;Name=MDB8827768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843012.1;locus_tag=PN289_03780;product=hypothetical protein;protein_id=MDB8827768.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 66081 66995 . - . ID=gene-PN289_03785;Name=PN289_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03785 JAQMMZ010000005.1 Protein Homology CDS 66081 66995 . - 0 ID=cds-MDB8827769.1;Parent=gene-PN289_03785;Dbxref=NCBI_GP:MDB8827769.1;Name=MDB8827769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843046.1;locus_tag=PN289_03785;product=ParM/StbA family protein;protein_id=MDB8827769.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 67535 68152 . + . ID=gene-PN289_03790;Name=PN289_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03790 JAQMMZ010000005.1 Protein Homology CDS 67535 68152 . + 0 ID=cds-MDB8827770.1;Parent=gene-PN289_03790;Dbxref=NCBI_GP:MDB8827770.1;Name=MDB8827770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843004.1;locus_tag=PN289_03790;product=DUF2628 domain-containing protein;protein_id=MDB8827770.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 68314 69255 . - . ID=gene-PN289_03795;Name=PN289_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03795 JAQMMZ010000005.1 Protein Homology CDS 68314 69255 . - 0 ID=cds-MDB8827771.1;Parent=gene-PN289_03795;Dbxref=NCBI_GP:MDB8827771.1;Name=MDB8827771.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843052.1;locus_tag=PN289_03795;product=NAD-dependent epimerase/dehydratase family protein;protein_id=MDB8827771.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 69358 71265 . - . ID=gene-PN289_03800;Name=PN289_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03800 JAQMMZ010000005.1 Protein Homology CDS 69358 71265 . - 0 ID=cds-MDB8827772.1;Parent=gene-PN289_03800;Dbxref=NCBI_GP:MDB8827772.1;Name=MDB8827772.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016047.2;locus_tag=PN289_03800;product=cell wall-binding repeat-containing protein;protein_id=MDB8827772.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 72035 75724 . + . ID=gene-PN289_03805;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PN289_03805 JAQMMZ010000005.1 Protein Homology CDS 72035 75724 . + 0 ID=cds-MDB8827773.1;Parent=gene-PN289_03805;Dbxref=NCBI_GP:MDB8827773.1;Name=MDB8827773.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595377.1;locus_tag=PN289_03805;product=DNA-directed RNA polymerase subunit beta;protein_id=MDB8827773.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 75893 79456 . + . ID=gene-PN289_03810;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PN289_03810 JAQMMZ010000005.1 Protein Homology CDS 75893 79456 . + 0 ID=cds-MDB8827774.1;Parent=gene-PN289_03810;Dbxref=NCBI_GP:MDB8827774.1;Name=MDB8827774.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595378.1;locus_tag=PN289_03810;product=DNA-directed RNA polymerase subunit beta';protein_id=MDB8827774.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 79698 80723 . - . ID=gene-PN289_03815;Name=PN289_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03815 JAQMMZ010000005.1 Protein Homology CDS 79698 80723 . - 0 ID=cds-MDB8827775.1;Parent=gene-PN289_03815;Dbxref=NCBI_GP:MDB8827775.1;Name=MDB8827775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016047.2;locus_tag=PN289_03815;product=cell wall-binding repeat-containing protein;protein_id=MDB8827775.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 81314 82714 . + . ID=gene-PN289_03820;Name=PN289_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03820 JAQMMZ010000005.1 Protein Homology CDS 81314 82714 . + 0 ID=cds-MDB8827776.1;Parent=gene-PN289_03820;Dbxref=NCBI_GP:MDB8827776.1;Name=MDB8827776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845850.1;locus_tag=PN289_03820;product=sodium:alanine symporter family protein;protein_id=MDB8827776.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 82969 84795 . - . ID=gene-PN289_03825;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=PN289_03825 JAQMMZ010000005.1 Protein Homology CDS 82969 84795 . - 0 ID=cds-MDB8827777.1;Parent=gene-PN289_03825;Dbxref=NCBI_GP:MDB8827777.1;Name=MDB8827777.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843083.1;locus_tag=PN289_03825;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=MDB8827777.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 85388 85759 . - . ID=gene-PN289_03830;Name=PN289_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03830 JAQMMZ010000005.1 Protein Homology CDS 85388 85759 . - 0 ID=cds-MDB8827778.1;Parent=gene-PN289_03830;Dbxref=NCBI_GP:MDB8827778.1;Name=MDB8827778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017519.2;locus_tag=PN289_03830;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=MDB8827778.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 85996 87075 . - . ID=gene-PN289_03835;Name=PN289_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03835 JAQMMZ010000005.1 Protein Homology CDS 85996 87075 . - 0 ID=cds-MDB8827779.1;Parent=gene-PN289_03835;Dbxref=NCBI_GP:MDB8827779.1;Name=MDB8827779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845847.1;locus_tag=PN289_03835;product=ABC transporter permease;protein_id=MDB8827779.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 87397 88290 . + . ID=gene-PN289_03840;Name=PN289_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03840 JAQMMZ010000005.1 Protein Homology CDS 87397 88290 . + 0 ID=cds-MDB8827780.1;Parent=gene-PN289_03840;Dbxref=NCBI_GP:MDB8827780.1;Name=MDB8827780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842968.1;locus_tag=PN289_03840;product=substrate-binding domain-containing protein;protein_id=MDB8827780.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 88291 89184 . + . ID=gene-PN289_03845;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PN289_03845 JAQMMZ010000005.1 Protein Homology CDS 88291 89184 . + 0 ID=cds-MDB8827781.1;Parent=gene-PN289_03845;Dbxref=NCBI_GP:MDB8827781.1;Name=MDB8827781.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842992.1;locus_tag=PN289_03845;product=phosphate ABC transporter permease subunit PstC;protein_id=MDB8827781.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 89177 90037 . + . ID=gene-PN289_03850;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PN289_03850 JAQMMZ010000005.1 Protein Homology CDS 89177 90037 . + 0 ID=cds-MDB8827782.1;Parent=gene-PN289_03850;Dbxref=NCBI_GP:MDB8827782.1;Name=MDB8827782.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842864.1;locus_tag=PN289_03850;product=phosphate ABC transporter permease PstA;protein_id=MDB8827782.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 90057 90806 . + . ID=gene-PN289_03855;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PN289_03855 JAQMMZ010000005.1 Protein Homology CDS 90057 90806 . + 0 ID=cds-MDB8827783.1;Parent=gene-PN289_03855;Dbxref=NCBI_GP:MDB8827783.1;Name=MDB8827783.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004841676.1;locus_tag=PN289_03855;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MDB8827783.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 90808 91467 . + . ID=gene-PN289_03860;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PN289_03860 JAQMMZ010000005.1 Protein Homology CDS 90808 91467 . + 0 ID=cds-MDB8827784.1;Parent=gene-PN289_03860;Dbxref=NCBI_GP:MDB8827784.1;Name=MDB8827784.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845845.1;locus_tag=PN289_03860;product=phosphate signaling complex protein PhoU;protein_id=MDB8827784.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 91592 92272 . + . ID=gene-PN289_03865;Name=PN289_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03865 JAQMMZ010000005.1 Protein Homology CDS 91592 92272 . + 0 ID=cds-MDB8827785.1;Parent=gene-PN289_03865;Dbxref=NCBI_GP:MDB8827785.1;Name=MDB8827785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843049.1;locus_tag=PN289_03865;product=response regulator transcription factor;protein_id=MDB8827785.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 92262 93578 . + . ID=gene-PN289_03870;Name=PN289_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03870 JAQMMZ010000005.1 Protein Homology CDS 92262 93578 . + 0 ID=cds-MDB8827786.1;Parent=gene-PN289_03870;Dbxref=NCBI_GP:MDB8827786.1;Name=MDB8827786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845843.1;locus_tag=PN289_03870;product=ATP-binding protein;protein_id=MDB8827786.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 93568 94500 . - . ID=gene-PN289_03875;Name=PN289_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03875 JAQMMZ010000005.1 Protein Homology CDS 93568 94500 . - 0 ID=cds-MDB8827787.1;Parent=gene-PN289_03875;Dbxref=NCBI_GP:MDB8827787.1;Name=MDB8827787.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845842.1;locus_tag=PN289_03875;product=EamA family transporter;protein_id=MDB8827787.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 94490 95959 . - . ID=gene-PN289_03880;Name=PN289_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03880 JAQMMZ010000005.1 Protein Homology CDS 94490 95959 . - 0 ID=cds-MDB8827788.1;Parent=gene-PN289_03880;Dbxref=NCBI_GP:MDB8827788.1;Name=MDB8827788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595539.1;locus_tag=PN289_03880;product=shikimate kinase;protein_id=MDB8827788.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 96177 96908 . + . ID=gene-PN289_03885;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PN289_03885 JAQMMZ010000005.1 Protein Homology CDS 96177 96908 . + 0 ID=cds-MDB8827789.1;Parent=gene-PN289_03885;Dbxref=NCBI_GP:MDB8827789.1;Name=MDB8827789.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595540.1;locus_tag=PN289_03885;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=MDB8827789.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 97121 98308 . + . ID=gene-PN289_03890;Name=PN289_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03890 JAQMMZ010000005.1 Protein Homology CDS 97121 98308 . + 0 ID=cds-MDB8827790.1;Parent=gene-PN289_03890;Dbxref=NCBI_GP:MDB8827790.1;Name=MDB8827790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845839.1;locus_tag=PN289_03890;product=ATP-binding protein;protein_id=MDB8827790.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 98452 99009 . - . ID=gene-PN289_03895;Name=PN289_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03895 JAQMMZ010000005.1 Protein Homology CDS 98452 99009 . - 0 ID=cds-MDB8827791.1;Parent=gene-PN289_03895;Dbxref=NCBI_GP:MDB8827791.1;Name=MDB8827791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845838.1;locus_tag=PN289_03895;product=biotin transporter BioY;protein_id=MDB8827791.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 99218 100024 . - . ID=gene-PN289_03900;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PN289_03900 JAQMMZ010000005.1 Protein Homology CDS 99218 100024 . - 0 ID=cds-MDB8827792.1;Parent=gene-PN289_03900;Dbxref=NCBI_GP:MDB8827792.1;Name=MDB8827792.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;gene=aroF;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843001.1;locus_tag=PN289_03900;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MDB8827792.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 100207 101445 . - . ID=gene-PN289_03905;Name=PN289_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03905 JAQMMZ010000005.1 Protein Homology CDS 100207 101445 . - 0 ID=cds-MDB8827793.1;Parent=gene-PN289_03905;Dbxref=NCBI_GP:MDB8827793.1;Name=MDB8827793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843024.1;locus_tag=PN289_03905;product=DUF1015 family protein;protein_id=MDB8827793.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 101692 102033 . + . ID=gene-PN289_03910;Name=PN289_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03910 JAQMMZ010000005.1 Protein Homology CDS 101692 102033 . + 0 ID=cds-MDB8827794.1;Parent=gene-PN289_03910;Dbxref=NCBI_GP:MDB8827794.1;Name=MDB8827794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842954.1;locus_tag=PN289_03910;product=arsenosugar biosynthesis-associated peroxidase-like protein;protein_id=MDB8827794.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 102065 103045 . + . ID=gene-PN289_03915;Name=arsS;gbkey=Gene;gene=arsS;gene_biotype=protein_coding;locus_tag=PN289_03915 JAQMMZ010000005.1 Protein Homology CDS 102065 103045 . + 0 ID=cds-MDB8827795.1;Parent=gene-PN289_03915;Dbxref=NCBI_GP:MDB8827795.1;Name=MDB8827795.1;Note=Some members of this family are selenoproteins.;Ontology_term=GO:0051536;gbkey=CDS;gene=arsS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845833.1;locus_tag=PN289_03915;product=arsenosugar biosynthesis radical SAM protein ArsS;protein_id=MDB8827795.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 103104 104459 . - . ID=gene-PN289_03920;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PN289_03920 JAQMMZ010000005.1 Protein Homology CDS 103104 104459 . - 0 ID=cds-MDB8827796.1;Parent=gene-PN289_03920;Dbxref=NCBI_GP:MDB8827796.1;Name=MDB8827796.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845831.1;locus_tag=PN289_03920;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=MDB8827796.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 104667 105515 . + . ID=gene-PN289_03925;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PN289_03925 JAQMMZ010000005.1 Protein Homology CDS 104667 105515 . + 0 ID=cds-MDB8827797.1;Parent=gene-PN289_03925;Dbxref=NCBI_GP:MDB8827797.1;Name=MDB8827797.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595543.1;locus_tag=PN289_03925;product=pur operon repressor;protein_id=MDB8827797.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 105518 106159 . + . ID=gene-PN289_03930;Name=PN289_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03930 JAQMMZ010000005.1 Protein Homology CDS 105518 106159 . + 0 ID=cds-MDB8827798.1;Parent=gene-PN289_03930;Dbxref=NCBI_GP:MDB8827798.1;Name=MDB8827798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845827.1;locus_tag=PN289_03930;product=pentapeptide repeat-containing protein;protein_id=MDB8827798.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 106233 107105 . + . ID=gene-PN289_03935;Name=PN289_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03935 JAQMMZ010000005.1 Protein Homology CDS 106233 107105 . + 0 ID=cds-MDB8827799.1;Parent=gene-PN289_03935;Dbxref=NCBI_GP:MDB8827799.1;Name=MDB8827799.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003422265.1;locus_tag=PN289_03935;product=class I SAM-dependent methyltransferase;protein_id=MDB8827799.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 107090 107794 . + . ID=gene-PN289_03940;Name=PN289_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03940 JAQMMZ010000005.1 Protein Homology CDS 107090 107794 . + 0 ID=cds-MDB8827800.1;Parent=gene-PN289_03940;Dbxref=NCBI_GP:MDB8827800.1;Name=MDB8827800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842967.1;locus_tag=PN289_03940;product=RluA family pseudouridine synthase;protein_id=MDB8827800.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 107848 108546 . + . ID=gene-PN289_03945;Name=PN289_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03945 JAQMMZ010000005.1 Protein Homology CDS 107848 108546 . + 0 ID=cds-MDB8827801.1;Parent=gene-PN289_03945;Dbxref=NCBI_GP:MDB8827801.1;Name=MDB8827801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842920.1;locus_tag=PN289_03945;product=UPF0489 family protein;protein_id=MDB8827801.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 108614 109108 . + . ID=gene-PN289_03950;Name=PN289_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03950 JAQMMZ010000005.1 Protein Homology CDS 108614 109108 . + 0 ID=cds-MDB8827802.1;Parent=gene-PN289_03950;Dbxref=NCBI_GP:MDB8827802.1;Name=MDB8827802.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843061.1;locus_tag=PN289_03950;product=SEC-C metal-binding domain-containing protein;protein_id=MDB8827802.1;transl_table=11 JAQMMZ010000005.1 Genbank gene 109256 110701 . + . ID=gene-PN289_03955;Name=PN289_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03955 JAQMMZ010000005.1 Protein Homology CDS 109256 110701 . + 0 ID=cds-MDB8827803.1;Parent=gene-PN289_03955;Dbxref=NCBI_GP:MDB8827803.1;Name=MDB8827803.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845824.1;locus_tag=PN289_03955;product=6-phospho-beta-glucosidase;protein_id=MDB8827803.1;transl_table=11 ##sequence-region JAQMMZ010000006.1 1 106073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000006.1 Genbank region 1 106073 . + . ID=JAQMMZ010000006.1:1..106073;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000006.1 Genbank pseudogene 58 198 . - . ID=gene-PN289_03960;Name=PN289_03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_03960;pseudo=true JAQMMZ010000006.1 Protein Homology CDS 58 198 . - 0 ID=cds-PN289_03960;Parent=gene-PN289_03960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263890.1;locus_tag=PN289_03960;product=transposase;pseudo=true;transl_table=11 JAQMMZ010000006.1 Genbank gene 374 682 . - . ID=gene-PN289_03965;Name=PN289_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03965 JAQMMZ010000006.1 Protein Homology CDS 374 682 . - 0 ID=cds-MDB8827804.1;Parent=gene-PN289_03965;Dbxref=NCBI_GP:MDB8827804.1;Name=MDB8827804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026041.2;locus_tag=PN289_03965;product=transposase family protein;protein_id=MDB8827804.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 936 3179 . - . ID=gene-PN289_03970;Name=PN289_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03970 JAQMMZ010000006.1 Protein Homology CDS 936 3179 . - 0 ID=cds-MDB8827805.1;Parent=gene-PN289_03970;Dbxref=NCBI_GP:MDB8827805.1;Name=MDB8827805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016047.2;locus_tag=PN289_03970;product=cell wall-binding repeat-containing protein;protein_id=MDB8827805.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 3586 4488 . - . ID=gene-PN289_03975;Name=PN289_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03975 JAQMMZ010000006.1 Protein Homology CDS 3586 4488 . - 0 ID=cds-MDB8827806.1;Parent=gene-PN289_03975;Dbxref=NCBI_GP:MDB8827806.1;Name=MDB8827806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595408.1;locus_tag=PN289_03975;product=hypothetical protein;protein_id=MDB8827806.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 4844 4999 . - . ID=gene-PN289_03980;Name=PN289_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03980 JAQMMZ010000006.1 Protein Homology CDS 4844 4999 . - 0 ID=cds-MDB8827807.1;Parent=gene-PN289_03980;Dbxref=NCBI_GP:MDB8827807.1;Name=MDB8827807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024249.2;locus_tag=PN289_03980;product=YvrJ family protein;protein_id=MDB8827807.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 5003 5233 . - . ID=gene-PN289_03985;Name=PN289_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03985 JAQMMZ010000006.1 Protein Homology CDS 5003 5233 . - 0 ID=cds-MDB8827808.1;Parent=gene-PN289_03985;Dbxref=NCBI_GP:MDB8827808.1;Name=MDB8827808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844553.1;locus_tag=PN289_03985;product=DUF2922 domain-containing protein;protein_id=MDB8827808.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 5277 5483 . - . ID=gene-PN289_03990;Name=PN289_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03990 JAQMMZ010000006.1 Protein Homology CDS 5277 5483 . - 0 ID=cds-MDB8827809.1;Parent=gene-PN289_03990;Dbxref=NCBI_GP:MDB8827809.1;Name=MDB8827809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844471.1;locus_tag=PN289_03990;product=DUF1659 domain-containing protein;protein_id=MDB8827809.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 5861 7201 . - . ID=gene-PN289_03995;Name=PN289_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_03995 JAQMMZ010000006.1 Protein Homology CDS 5861 7201 . - 0 ID=cds-MDB8827810.1;Parent=gene-PN289_03995;Dbxref=NCBI_GP:MDB8827810.1;Name=MDB8827810.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009663360.1;locus_tag=PN289_03995;product=FAD-dependent oxidoreductase;protein_id=MDB8827810.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 7375 8289 . - . ID=gene-PN289_04000;Name=PN289_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04000 JAQMMZ010000006.1 Protein Homology CDS 7375 8289 . - 0 ID=cds-MDB8827811.1;Parent=gene-PN289_04000;Dbxref=NCBI_GP:MDB8827811.1;Name=MDB8827811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844502.1;locus_tag=PN289_04000;product=carbohydrate ABC transporter permease;protein_id=MDB8827811.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 8290 9174 . - . ID=gene-PN289_04005;Name=PN289_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04005 JAQMMZ010000006.1 Protein Homology CDS 8290 9174 . - 0 ID=cds-MDB8827812.1;Parent=gene-PN289_04005;Dbxref=NCBI_GP:MDB8827812.1;Name=MDB8827812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845479.1;locus_tag=PN289_04005;product=sugar ABC transporter permease;protein_id=MDB8827812.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 9258 10487 . - . ID=gene-PN289_04010;Name=PN289_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04010 JAQMMZ010000006.1 Protein Homology CDS 9258 10487 . - 0 ID=cds-MDB8827813.1;Parent=gene-PN289_04010;Dbxref=NCBI_GP:MDB8827813.1;Name=MDB8827813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844521.1;locus_tag=PN289_04010;product=sugar ABC transporter substrate-binding protein;protein_id=MDB8827813.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 10707 12542 . + . ID=gene-PN289_04015;Name=PN289_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04015 JAQMMZ010000006.1 Protein Homology CDS 10707 12542 . + 0 ID=cds-MDB8827814.1;Parent=gene-PN289_04015;Dbxref=NCBI_GP:MDB8827814.1;Name=MDB8827814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845481.1;locus_tag=PN289_04015;product=DUF4091 domain-containing protein;protein_id=MDB8827814.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 12677 14458 . - . ID=gene-PN289_04020;Name=PN289_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04020 JAQMMZ010000006.1 Protein Homology CDS 12677 14458 . - 0 ID=cds-MDB8827815.1;Parent=gene-PN289_04020;Dbxref=NCBI_GP:MDB8827815.1;Name=MDB8827815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844440.1;locus_tag=PN289_04020;product=AAA family ATPase;protein_id=MDB8827815.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 14665 16212 . - . ID=gene-PN289_04025;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=PN289_04025 JAQMMZ010000006.1 Protein Homology CDS 14665 16212 . - 0 ID=cds-MDB8827816.1;Parent=gene-PN289_04025;Dbxref=NCBI_GP:MDB8827816.1;Name=MDB8827816.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844445.1;locus_tag=PN289_04025;product=ribonuclease Y;protein_id=MDB8827816.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 16569 17624 . - . ID=gene-PN289_04030;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PN289_04030 JAQMMZ010000006.1 Protein Homology CDS 16569 17624 . - 0 ID=cds-MDB8827817.1;Parent=gene-PN289_04030;Dbxref=NCBI_GP:MDB8827817.1;Name=MDB8827817.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844480.1;locus_tag=PN289_04030;product=recombinase RecA;protein_id=MDB8827817.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 17915 18454 . - . ID=gene-PN289_04035;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PN289_04035 JAQMMZ010000006.1 Protein Homology CDS 17915 18454 . - 0 ID=cds-MDB8827818.1;Parent=gene-PN289_04035;Dbxref=NCBI_GP:MDB8827818.1;Name=MDB8827818.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595405.1;locus_tag=PN289_04035;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=MDB8827818.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 18467 19816 . - . ID=gene-PN289_04040;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PN289_04040 JAQMMZ010000006.1 Protein Homology CDS 18467 19816 . - 0 ID=cds-MDB8827819.1;Parent=gene-PN289_04040;Dbxref=NCBI_GP:MDB8827819.1;Name=MDB8827819.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595404.1;locus_tag=PN289_04040;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=MDB8827819.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 19856 22285 . - . ID=gene-PN289_04045;Name=PN289_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04045 JAQMMZ010000006.1 Protein Homology CDS 19856 22285 . - 0 ID=cds-MDB8827820.1;Parent=gene-PN289_04045;Dbxref=NCBI_GP:MDB8827820.1;Name=MDB8827820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844468.1;locus_tag=PN289_04045;product=DNA translocase FtsK;protein_id=MDB8827820.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 22285 23538 . - . ID=gene-PN289_04050;Name=PN289_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04050 JAQMMZ010000006.1 Protein Homology CDS 22285 23538 . - 0 ID=cds-MDB8827821.1;Parent=gene-PN289_04050;Dbxref=NCBI_GP:MDB8827821.1;Name=MDB8827821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844486.1;locus_tag=PN289_04050;product=pitrilysin family protein;protein_id=MDB8827821.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 23770 24693 . - . ID=gene-PN289_04055;Name=PN289_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04055 JAQMMZ010000006.1 Protein Homology CDS 23770 24693 . - 0 ID=cds-MDB8827822.1;Parent=gene-PN289_04055;Dbxref=NCBI_GP:MDB8827822.1;Name=MDB8827822.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844494.1;locus_tag=PN289_04055;product=sugar phosphate nucleotidyltransferase;protein_id=MDB8827822.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 24789 25259 . - . ID=gene-PN289_04060;Name=PN289_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04060 JAQMMZ010000006.1 Protein Homology CDS 24789 25259 . - 0 ID=cds-MDB8827823.1;Parent=gene-PN289_04060;Dbxref=NCBI_GP:MDB8827823.1;Name=MDB8827823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844496.1;locus_tag=PN289_04060;product=small multi-drug export protein;protein_id=MDB8827823.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 25400 25861 . - . ID=gene-PN289_04065;Name=PN289_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04065 JAQMMZ010000006.1 Protein Homology CDS 25400 25861 . - 0 ID=cds-MDB8827824.1;Parent=gene-PN289_04065;Dbxref=NCBI_GP:MDB8827824.1;Name=MDB8827824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845492.1;locus_tag=PN289_04065;product=GtrA family protein;protein_id=MDB8827824.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 26110 28755 . - . ID=gene-PN289_04070;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=PN289_04070 JAQMMZ010000006.1 Protein Homology CDS 26110 28755 . - 0 ID=cds-MDB8827825.1;Parent=gene-PN289_04070;Dbxref=NCBI_GP:MDB8827825.1;Name=MDB8827825.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845493.1;locus_tag=PN289_04070;product=pyruvate%2C phosphate dikinase;protein_id=MDB8827825.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 28773 29612 . - . ID=gene-PN289_04075;Name=PN289_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04075 JAQMMZ010000006.1 Protein Homology CDS 28773 29612 . - 0 ID=cds-MDB8827826.1;Parent=gene-PN289_04075;Dbxref=NCBI_GP:MDB8827826.1;Name=MDB8827826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844464.1;locus_tag=PN289_04075;product=kinase/pyrophosphorylase;protein_id=MDB8827826.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 29626 30258 . - . ID=gene-PN289_04080;Name=PN289_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04080 JAQMMZ010000006.1 Protein Homology CDS 29626 30258 . - 0 ID=cds-MDB8827827.1;Parent=gene-PN289_04080;Dbxref=NCBI_GP:MDB8827827.1;Name=MDB8827827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845494.1;locus_tag=PN289_04080;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827827.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 30547 32610 . - . ID=gene-PN289_04085;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PN289_04085 JAQMMZ010000006.1 Protein Homology CDS 30547 32610 . - 0 ID=cds-MDB8827828.1;Parent=gene-PN289_04085;Dbxref=NCBI_GP:MDB8827828.1;Name=MDB8827828.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595401.1;locus_tag=PN289_04085;product=glycine--tRNA ligase subunit beta;protein_id=MDB8827828.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 32603 33487 . - . ID=gene-PN289_04090;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PN289_04090 JAQMMZ010000006.1 Protein Homology CDS 32603 33487 . - 0 ID=cds-MDB8827829.1;Parent=gene-PN289_04090;Dbxref=NCBI_GP:MDB8827829.1;Name=MDB8827829.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788980.1;locus_tag=PN289_04090;product=glycine--tRNA ligase subunit alpha;protein_id=MDB8827829.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 33591 34196 . - . ID=gene-PN289_04095;Name=PN289_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04095 JAQMMZ010000006.1 Protein Homology CDS 33591 34196 . - 0 ID=cds-MDB8827830.1;Parent=gene-PN289_04095;Dbxref=NCBI_GP:MDB8827830.1;Name=MDB8827830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595400.1;locus_tag=PN289_04095;product=DUF4342 domain-containing protein;protein_id=MDB8827830.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 34208 34954 . - . ID=gene-PN289_04100;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PN289_04100 JAQMMZ010000006.1 Protein Homology CDS 34208 34954 . - 0 ID=cds-MDB8827831.1;Parent=gene-PN289_04100;Dbxref=NCBI_GP:MDB8827831.1;Name=MDB8827831.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844451.1;locus_tag=PN289_04100;product=DNA repair protein RecO;protein_id=MDB8827831.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 35056 36435 . - . ID=gene-PN289_04105;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=PN289_04105 JAQMMZ010000006.1 Protein Homology CDS 35056 36435 . - 0 ID=cds-MDB8827832.1;Parent=gene-PN289_04105;Dbxref=NCBI_GP:MDB8827832.1;Name=MDB8827832.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844495.1;locus_tag=PN289_04105;product=magnesium transporter;protein_id=MDB8827832.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 36464 37363 . - . ID=gene-PN289_04110;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=PN289_04110 JAQMMZ010000006.1 Protein Homology CDS 36464 37363 . - 0 ID=cds-MDB8827833.1;Parent=gene-PN289_04110;Dbxref=NCBI_GP:MDB8827833.1;Name=MDB8827833.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845501.1;locus_tag=PN289_04110;product=GTPase Era;protein_id=MDB8827833.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 37478 38227 . - . ID=gene-PN289_04115;Name=PN289_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04115 JAQMMZ010000006.1 Protein Homology CDS 37478 38227 . - 0 ID=cds-MDB8827834.1;Parent=gene-PN289_04115;Dbxref=NCBI_GP:MDB8827834.1;Name=MDB8827834.1;Ontology_term=GO:0008654,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595399.1;locus_tag=PN289_04115;product=diacylglycerol kinase;protein_id=MDB8827834.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 38217 38693 . - . ID=gene-PN289_04120;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PN289_04120 JAQMMZ010000006.1 Protein Homology CDS 38217 38693 . - 0 ID=cds-MDB8827835.1;Parent=gene-PN289_04120;Dbxref=NCBI_GP:MDB8827835.1;Name=MDB8827835.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844469.1;locus_tag=PN289_04120;product=rRNA maturation RNase YbeY;protein_id=MDB8827835.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 38700 39710 . - . ID=gene-PN289_04125;Name=PN289_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04125 JAQMMZ010000006.1 Protein Homology CDS 38700 39710 . - 0 ID=cds-MDB8827836.1;Parent=gene-PN289_04125;Dbxref=NCBI_GP:MDB8827836.1;Name=MDB8827836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844410.1;locus_tag=PN289_04125;product=PhoH family protein;protein_id=MDB8827836.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 39860 40411 . - . ID=gene-PN289_04130;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PN289_04130 JAQMMZ010000006.1 Protein Homology CDS 39860 40411 . - 0 ID=cds-MDB8827837.1;Parent=gene-PN289_04130;Dbxref=NCBI_GP:MDB8827837.1;Name=MDB8827837.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845506.1;locus_tag=PN289_04130;product=ribosome-associated translation inhibitor RaiA;protein_id=MDB8827837.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 40535 41680 . - . ID=gene-PN289_04135;Name=PN289_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04135 JAQMMZ010000006.1 Protein Homology CDS 40535 41680 . - 0 ID=cds-MDB8827838.1;Parent=gene-PN289_04135;Dbxref=NCBI_GP:MDB8827838.1;Name=MDB8827838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845507.1;locus_tag=PN289_04135;product=hypothetical protein;protein_id=MDB8827838.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 41834 43198 . - . ID=gene-PN289_04140;Name=PN289_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04140 JAQMMZ010000006.1 Protein Homology CDS 41834 43198 . - 0 ID=cds-MDB8827839.1;Parent=gene-PN289_04140;Dbxref=NCBI_GP:MDB8827839.1;Name=MDB8827839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845508.1;locus_tag=PN289_04140;product=hypothetical protein;protein_id=MDB8827839.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 43191 44078 . - . ID=gene-PN289_04145;Name=PN289_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04145 JAQMMZ010000006.1 Protein Homology CDS 43191 44078 . - 0 ID=cds-MDB8827840.1;Parent=gene-PN289_04145;Dbxref=NCBI_GP:MDB8827840.1;Name=MDB8827840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844511.1;locus_tag=PN289_04145;product=hypothetical protein;protein_id=MDB8827840.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 44091 44894 . - . ID=gene-PN289_04150;Name=PN289_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04150 JAQMMZ010000006.1 Protein Homology CDS 44091 44894 . - 0 ID=cds-MDB8827841.1;Parent=gene-PN289_04150;Dbxref=NCBI_GP:MDB8827841.1;Name=MDB8827841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595398.1;locus_tag=PN289_04150;product=hypothetical protein;protein_id=MDB8827841.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 44887 45606 . - . ID=gene-PN289_04155;Name=PN289_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04155 JAQMMZ010000006.1 Protein Homology CDS 44887 45606 . - 0 ID=cds-MDB8827842.1;Parent=gene-PN289_04155;Dbxref=NCBI_GP:MDB8827842.1;Name=MDB8827842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845512.1;locus_tag=PN289_04155;product=ABC transporter ATP-binding protein;protein_id=MDB8827842.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 45644 46072 . - . ID=gene-PN289_04160;Name=PN289_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04160 JAQMMZ010000006.1 Protein Homology CDS 45644 46072 . - 0 ID=cds-MDB8827843.1;Parent=gene-PN289_04160;Dbxref=NCBI_GP:MDB8827843.1;Name=MDB8827843.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844408.1;locus_tag=PN289_04160;product=GntR family transcriptional regulator;protein_id=MDB8827843.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 46269 47348 . - . ID=gene-PN289_04165;Name=PN289_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04165 JAQMMZ010000006.1 Protein Homology CDS 46269 47348 . - 0 ID=cds-MDB8827844.1;Parent=gene-PN289_04165;Dbxref=NCBI_GP:MDB8827844.1;Name=MDB8827844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845513.1;locus_tag=PN289_04165;product=DUF2871 domain-containing protein;protein_id=MDB8827844.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 47345 47908 . - . ID=gene-PN289_04170;Name=PN289_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04170 JAQMMZ010000006.1 Protein Homology CDS 47345 47908 . - 0 ID=cds-MDB8827845.1;Parent=gene-PN289_04170;Dbxref=NCBI_GP:MDB8827845.1;Name=MDB8827845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844552.1;locus_tag=PN289_04170;product=TetR/AcrR family transcriptional regulator;protein_id=MDB8827845.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 48067 48351 . - . ID=gene-PN289_04175;Name=PN289_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04175 JAQMMZ010000006.1 Protein Homology CDS 48067 48351 . - 0 ID=cds-MDB8827846.1;Parent=gene-PN289_04175;Dbxref=NCBI_GP:MDB8827846.1;Name=MDB8827846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845514.1;locus_tag=PN289_04175;product=hypothetical protein;protein_id=MDB8827846.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 49008 49139 . - . ID=gene-PN289_04180;Name=PN289_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04180 JAQMMZ010000006.1 GeneMarkS-2+ CDS 49008 49139 . - 0 ID=cds-MDB8827847.1;Parent=gene-PN289_04180;Dbxref=NCBI_GP:MDB8827847.1;Name=MDB8827847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04180;product=hypothetical protein;protein_id=MDB8827847.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 49338 50666 . - . ID=gene-PN289_04185;Name=PN289_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04185 JAQMMZ010000006.1 Protein Homology CDS 49338 50666 . - 0 ID=cds-MDB8827848.1;Parent=gene-PN289_04185;Dbxref=NCBI_GP:MDB8827848.1;Name=MDB8827848.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013954.2;locus_tag=PN289_04185;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDB8827848.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 50729 50980 . - . ID=gene-PN289_04190;Name=PN289_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04190 JAQMMZ010000006.1 Protein Homology CDS 50729 50980 . - 0 ID=cds-MDB8827849.1;Parent=gene-PN289_04190;Dbxref=NCBI_GP:MDB8827849.1;Name=MDB8827849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027405.2;locus_tag=PN289_04190;product=phage holin family protein;protein_id=MDB8827849.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 50982 51323 . - . ID=gene-PN289_04195;Name=PN289_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04195 JAQMMZ010000006.1 GeneMarkS-2+ CDS 50982 51323 . - 0 ID=cds-MDB8827850.1;Parent=gene-PN289_04195;Dbxref=NCBI_GP:MDB8827850.1;Name=MDB8827850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04195;product=hypothetical protein;protein_id=MDB8827850.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 51335 52510 . - . ID=gene-PN289_04200;Name=PN289_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04200 JAQMMZ010000006.1 GeneMarkS-2+ CDS 51335 52510 . - 0 ID=cds-MDB8827851.1;Parent=gene-PN289_04200;Dbxref=NCBI_GP:MDB8827851.1;Name=MDB8827851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04200;product=hypothetical protein;protein_id=MDB8827851.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 52527 52715 . - . ID=gene-PN289_04205;Name=PN289_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04205 JAQMMZ010000006.1 GeneMarkS-2+ CDS 52527 52715 . - 0 ID=cds-MDB8827852.1;Parent=gene-PN289_04205;Dbxref=NCBI_GP:MDB8827852.1;Name=MDB8827852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04205;product=hypothetical protein;protein_id=MDB8827852.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 52715 53278 . - . ID=gene-PN289_04210;Name=PN289_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04210 JAQMMZ010000006.1 Protein Homology CDS 52715 53278 . - 0 ID=cds-MDB8827853.1;Parent=gene-PN289_04210;Dbxref=NCBI_GP:MDB8827853.1;Name=MDB8827853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021583.2;locus_tag=PN289_04210;product=DUF2313 domain-containing protein;protein_id=MDB8827853.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 53265 54326 . - . ID=gene-PN289_04215;Name=PN289_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04215 JAQMMZ010000006.1 Protein Homology CDS 53265 54326 . - 0 ID=cds-MDB8827854.1;Parent=gene-PN289_04215;Dbxref=NCBI_GP:MDB8827854.1;Name=MDB8827854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PN289_04215;product=baseplate J/gp47 family protein;protein_id=MDB8827854.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 54319 54744 . - . ID=gene-PN289_04220;Name=PN289_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04220 JAQMMZ010000006.1 Protein Homology CDS 54319 54744 . - 0 ID=cds-MDB8827855.1;Parent=gene-PN289_04220;Dbxref=NCBI_GP:MDB8827855.1;Name=MDB8827855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022387.2;locus_tag=PN289_04220;product=DUF2634 domain-containing protein;protein_id=MDB8827855.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 54741 55091 . - . ID=gene-PN289_04225;Name=PN289_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04225 JAQMMZ010000006.1 Protein Homology CDS 54741 55091 . - 0 ID=cds-MDB8827856.1;Parent=gene-PN289_04225;Dbxref=NCBI_GP:MDB8827856.1;Name=MDB8827856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022300.2;locus_tag=PN289_04225;product=DUF2577 family protein;protein_id=MDB8827856.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 55103 57160 . - . ID=gene-PN289_04230;Name=PN289_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04230 JAQMMZ010000006.1 Protein Homology CDS 55103 57160 . - 0 ID=cds-MDB8827857.1;Parent=gene-PN289_04230;Dbxref=NCBI_GP:MDB8827857.1;Name=MDB8827857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017102.2;locus_tag=PN289_04230;product=CHAP domain-containing protein;protein_id=MDB8827857.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 57169 57918 . - . ID=gene-PN289_04235;Name=PN289_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04235 JAQMMZ010000006.1 GeneMarkS-2+ CDS 57169 57918 . - 0 ID=cds-MDB8827858.1;Parent=gene-PN289_04235;Dbxref=NCBI_GP:MDB8827858.1;Name=MDB8827858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04235;product=SH3 domain-containing protein;protein_id=MDB8827858.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 57930 60089 . - . ID=gene-PN289_04240;Name=PN289_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04240 JAQMMZ010000006.1 Protein Homology CDS 57930 60089 . - 0 ID=cds-MDB8827859.1;Parent=gene-PN289_04240;Dbxref=NCBI_GP:MDB8827859.1;Name=MDB8827859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=PN289_04240;product=tape measure protein;protein_id=MDB8827859.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 60093 60230 . - . ID=gene-PN289_04245;Name=PN289_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04245 JAQMMZ010000006.1 GeneMarkS-2+ CDS 60093 60230 . - 0 ID=cds-MDB8827860.1;Parent=gene-PN289_04245;Dbxref=NCBI_GP:MDB8827860.1;Name=MDB8827860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04245;product=hypothetical protein;protein_id=MDB8827860.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 60272 60676 . - . ID=gene-PN289_04250;Name=PN289_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04250 JAQMMZ010000006.1 Protein Homology CDS 60272 60676 . - 0 ID=cds-MDB8827861.1;Parent=gene-PN289_04250;Dbxref=NCBI_GP:MDB8827861.1;Name=MDB8827861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020464.2;locus_tag=PN289_04250;product=hypothetical protein;protein_id=MDB8827861.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 60771 61259 . - . ID=gene-PN289_04255;Name=PN289_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04255 JAQMMZ010000006.1 Protein Homology CDS 60771 61259 . - 0 ID=cds-MDB8827862.1;Parent=gene-PN289_04255;Dbxref=NCBI_GP:MDB8827862.1;Name=MDB8827862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020949.2;locus_tag=PN289_04255;product=phage tail tube protein;protein_id=MDB8827862.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 61269 62606 . - . ID=gene-PN289_04260;Name=PN289_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04260 JAQMMZ010000006.1 Protein Homology CDS 61269 62606 . - 0 ID=cds-MDB8827863.1;Parent=gene-PN289_04260;Dbxref=NCBI_GP:MDB8827863.1;Name=MDB8827863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016845.2;locus_tag=PN289_04260;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=MDB8827863.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 62606 62842 . - . ID=gene-PN289_04265;Name=PN289_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04265 JAQMMZ010000006.1 GeneMarkS-2+ CDS 62606 62842 . - 0 ID=cds-MDB8827864.1;Parent=gene-PN289_04265;Dbxref=NCBI_GP:MDB8827864.1;Name=MDB8827864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04265;product=hypothetical protein;protein_id=MDB8827864.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 62835 63260 . - . ID=gene-PN289_04270;Name=PN289_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04270 JAQMMZ010000006.1 GeneMarkS-2+ CDS 62835 63260 . - 0 ID=cds-MDB8827865.1;Parent=gene-PN289_04270;Dbxref=NCBI_GP:MDB8827865.1;Name=MDB8827865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04270;product=hypothetical protein;protein_id=MDB8827865.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 63253 63732 . - . ID=gene-PN289_04275;Name=PN289_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04275 JAQMMZ010000006.1 Protein Homology CDS 63253 63732 . - 0 ID=cds-MDB8827866.1;Parent=gene-PN289_04275;Dbxref=NCBI_GP:MDB8827866.1;Name=MDB8827866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016754.2;locus_tag=PN289_04275;product=HK97 gp10 family phage protein;protein_id=MDB8827866.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 63732 64091 . - . ID=gene-PN289_04280;Name=PN289_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04280 JAQMMZ010000006.1 GeneMarkS-2+ CDS 63732 64091 . - 0 ID=cds-MDB8827867.1;Parent=gene-PN289_04280;Dbxref=NCBI_GP:MDB8827867.1;Name=MDB8827867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04280;product=hypothetical protein;protein_id=MDB8827867.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 64100 64477 . - . ID=gene-PN289_04285;Name=PN289_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04285 JAQMMZ010000006.1 GeneMarkS-2+ CDS 64100 64477 . - 0 ID=cds-MDB8827868.1;Parent=gene-PN289_04285;Dbxref=NCBI_GP:MDB8827868.1;Name=MDB8827868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04285;product=hypothetical protein;protein_id=MDB8827868.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 64486 64767 . - . ID=gene-PN289_04290;Name=PN289_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04290 JAQMMZ010000006.1 GeneMarkS-2+ CDS 64486 64767 . - 0 ID=cds-MDB8827869.1;Parent=gene-PN289_04290;Dbxref=NCBI_GP:MDB8827869.1;Name=MDB8827869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04290;product=hypothetical protein;protein_id=MDB8827869.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 64771 65733 . - . ID=gene-PN289_04295;Name=PN289_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04295 JAQMMZ010000006.1 Protein Homology CDS 64771 65733 . - 0 ID=cds-MDB8827870.1;Parent=gene-PN289_04295;Dbxref=NCBI_GP:MDB8827870.1;Name=MDB8827870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002589156.1;locus_tag=PN289_04295;product=phage capsid protein;protein_id=MDB8827870.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 65751 66302 . - . ID=gene-PN289_04300;Name=PN289_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04300 JAQMMZ010000006.1 GeneMarkS-2+ CDS 65751 66302 . - 0 ID=cds-MDB8827871.1;Parent=gene-PN289_04300;Dbxref=NCBI_GP:MDB8827871.1;Name=MDB8827871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04300;product=hypothetical protein;protein_id=MDB8827871.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 66716 67033 . - . ID=gene-PN289_04305;Name=PN289_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04305 JAQMMZ010000006.1 Protein Homology CDS 66716 67033 . - 0 ID=cds-MDB8827872.1;Parent=gene-PN289_04305;Dbxref=NCBI_GP:MDB8827872.1;Name=MDB8827872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039396.1;locus_tag=PN289_04305;product=DUF6275 family protein;protein_id=MDB8827872.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 67030 67245 . - . ID=gene-PN289_04310;Name=PN289_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04310 JAQMMZ010000006.1 GeneMarkS-2+ CDS 67030 67245 . - 0 ID=cds-MDB8827873.1;Parent=gene-PN289_04310;Dbxref=NCBI_GP:MDB8827873.1;Name=MDB8827873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04310;product=hypothetical protein;protein_id=MDB8827873.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 67258 67458 . - . ID=gene-PN289_04315;Name=PN289_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04315 JAQMMZ010000006.1 GeneMarkS-2+ CDS 67258 67458 . - 0 ID=cds-MDB8827874.1;Parent=gene-PN289_04315;Dbxref=NCBI_GP:MDB8827874.1;Name=MDB8827874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04315;product=hypothetical protein;protein_id=MDB8827874.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 67499 68092 . - . ID=gene-PN289_04320;Name=PN289_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04320 JAQMMZ010000006.1 GeneMarkS-2+ CDS 67499 68092 . - 0 ID=cds-MDB8827875.1;Parent=gene-PN289_04320;Dbxref=NCBI_GP:MDB8827875.1;Name=MDB8827875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04320;product=hypothetical protein;protein_id=MDB8827875.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 68232 68405 . - . ID=gene-PN289_04325;Name=PN289_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04325 JAQMMZ010000006.1 Protein Homology CDS 68232 68405 . - 0 ID=cds-MDB8827876.1;Parent=gene-PN289_04325;Dbxref=NCBI_GP:MDB8827876.1;Name=MDB8827876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167253.1;locus_tag=PN289_04325;product=CPCC family cysteine-rich protein;protein_id=MDB8827876.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 68406 69926 . - . ID=gene-PN289_04330;Name=PN289_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04330 JAQMMZ010000006.1 Protein Homology CDS 68406 69926 . - 0 ID=cds-MDB8827877.1;Parent=gene-PN289_04330;Dbxref=NCBI_GP:MDB8827877.1;Name=MDB8827877.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01641.1;locus_tag=PN289_04330;product=minor capsid protein;protein_id=MDB8827877.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 69913 71364 . - . ID=gene-PN289_04335;Name=PN289_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04335 JAQMMZ010000006.1 Protein Homology CDS 69913 71364 . - 0 ID=cds-MDB8827878.1;Parent=gene-PN289_04335;Dbxref=NCBI_GP:MDB8827878.1;Name=MDB8827878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016988.2;locus_tag=PN289_04335;product=phage portal protein;protein_id=MDB8827878.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 71376 72635 . - . ID=gene-PN289_04340;Name=PN289_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04340 JAQMMZ010000006.1 Protein Homology CDS 71376 72635 . - 0 ID=cds-MDB8827879.1;Parent=gene-PN289_04340;Dbxref=NCBI_GP:MDB8827879.1;Name=MDB8827879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007780425.1;locus_tag=PN289_04340;product=PBSX family phage terminase large subunit;protein_id=MDB8827879.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 72625 73044 . - . ID=gene-PN289_04345;Name=PN289_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04345 JAQMMZ010000006.1 Protein Homology CDS 72625 73044 . - 0 ID=cds-MDB8827880.1;Parent=gene-PN289_04345;Dbxref=NCBI_GP:MDB8827880.1;Name=MDB8827880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457818.1;locus_tag=PN289_04345;product=terminase small subunit;protein_id=MDB8827880.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 73104 73739 . - . ID=gene-PN289_04350;Name=PN289_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04350 JAQMMZ010000006.1 GeneMarkS-2+ CDS 73104 73739 . - 0 ID=cds-MDB8827881.1;Parent=gene-PN289_04350;Dbxref=NCBI_GP:MDB8827881.1;Name=MDB8827881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04350;product=hypothetical protein;protein_id=MDB8827881.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 74083 74580 . - . ID=gene-PN289_04355;Name=PN289_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04355 JAQMMZ010000006.1 GeneMarkS-2+ CDS 74083 74580 . - 0 ID=cds-MDB8827882.1;Parent=gene-PN289_04355;Dbxref=NCBI_GP:MDB8827882.1;Name=MDB8827882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04355;product=hypothetical protein;protein_id=MDB8827882.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 74660 75346 . - . ID=gene-PN289_04360;Name=PN289_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04360 JAQMMZ010000006.1 Protein Homology CDS 74660 75346 . - 0 ID=cds-MDB8827883.1;Parent=gene-PN289_04360;Dbxref=NCBI_GP:MDB8827883.1;Name=MDB8827883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595306.1;locus_tag=PN289_04360;product=hypothetical protein;protein_id=MDB8827883.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 75356 76312 . - . ID=gene-PN289_04365;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PN289_04365 JAQMMZ010000006.1 Protein Homology CDS 75356 76312 . - 0 ID=cds-MDB8827884.1;Parent=gene-PN289_04365;Dbxref=NCBI_GP:MDB8827884.1;Name=MDB8827884.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845660.1;locus_tag=PN289_04365;product=dUTP diphosphatase;protein_id=MDB8827884.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 76325 76651 . - . ID=gene-PN289_04370;Name=PN289_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04370 JAQMMZ010000006.1 Protein Homology CDS 76325 76651 . - 0 ID=cds-MDB8827885.1;Parent=gene-PN289_04370;Dbxref=NCBI_GP:MDB8827885.1;Name=MDB8827885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845661.1;locus_tag=PN289_04370;product=hypothetical protein;protein_id=MDB8827885.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 76633 77205 . - . ID=gene-PN289_04375;Name=PN289_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04375 JAQMMZ010000006.1 Protein Homology CDS 76633 77205 . - 0 ID=cds-MDB8827886.1;Parent=gene-PN289_04375;Dbxref=NCBI_GP:MDB8827886.1;Name=MDB8827886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845662.1;locus_tag=PN289_04375;product=helix-turn-helix domain-containing protein;protein_id=MDB8827886.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 77223 77720 . - . ID=gene-PN289_04380;Name=PN289_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04380 JAQMMZ010000006.1 Protein Homology CDS 77223 77720 . - 0 ID=cds-MDB8827887.1;Parent=gene-PN289_04380;Dbxref=NCBI_GP:MDB8827887.1;Name=MDB8827887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845668.1;locus_tag=PN289_04380;product=hypothetical protein;protein_id=MDB8827887.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 77779 78168 . - . ID=gene-PN289_04385;Name=PN289_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04385 JAQMMZ010000006.1 Protein Homology CDS 77779 78168 . - 0 ID=cds-MDB8827888.1;Parent=gene-PN289_04385;Dbxref=NCBI_GP:MDB8827888.1;Name=MDB8827888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845671.1;locus_tag=PN289_04385;product=single-stranded DNA-binding protein;protein_id=MDB8827888.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 78173 78928 . - . ID=gene-PN289_04390;Name=PN289_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04390 JAQMMZ010000006.1 Protein Homology CDS 78173 78928 . - 0 ID=cds-MDB8827889.1;Parent=gene-PN289_04390;Dbxref=NCBI_GP:MDB8827889.1;Name=MDB8827889.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018597630.1;locus_tag=PN289_04390;product=phage antirepressor KilAC domain-containing protein;protein_id=MDB8827889.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 78973 79275 . - . ID=gene-PN289_04395;Name=PN289_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04395 JAQMMZ010000006.1 GeneMarkS-2+ CDS 78973 79275 . - 0 ID=cds-MDB8827890.1;Parent=gene-PN289_04395;Dbxref=NCBI_GP:MDB8827890.1;Name=MDB8827890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04395;product=hypothetical protein;protein_id=MDB8827890.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 79460 79840 . - . ID=gene-PN289_04400;Name=PN289_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04400 JAQMMZ010000006.1 Protein Homology CDS 79460 79840 . - 0 ID=cds-MDB8827891.1;Parent=gene-PN289_04400;Dbxref=NCBI_GP:MDB8827891.1;Name=MDB8827891.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009528463.1;locus_tag=PN289_04400;product=RusA family crossover junction endodeoxyribonuclease;protein_id=MDB8827891.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 79833 80603 . - . ID=gene-PN289_04405;Name=PN289_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04405 JAQMMZ010000006.1 Protein Homology CDS 79833 80603 . - 0 ID=cds-MDB8827892.1;Parent=gene-PN289_04405;Dbxref=NCBI_GP:MDB8827892.1;Name=MDB8827892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595308.1;locus_tag=PN289_04405;product=DnaA/Hda family protein;protein_id=MDB8827892.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 80509 81174 . - . ID=gene-PN289_04410;Name=PN289_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04410 JAQMMZ010000006.1 GeneMarkS-2+ CDS 80509 81174 . - 0 ID=cds-MDB8827893.1;Parent=gene-PN289_04410;Dbxref=NCBI_GP:MDB8827893.1;Name=MDB8827893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04410;product=hypothetical protein;protein_id=MDB8827893.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 81368 81553 . - . ID=gene-PN289_04415;Name=PN289_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04415 JAQMMZ010000006.1 GeneMarkS-2+ CDS 81368 81553 . - 0 ID=cds-MDB8827894.1;Parent=gene-PN289_04415;Dbxref=NCBI_GP:MDB8827894.1;Name=MDB8827894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04415;product=hypothetical protein;protein_id=MDB8827894.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 81550 82191 . - . ID=gene-PN289_04420;Name=PN289_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04420 JAQMMZ010000006.1 Protein Homology CDS 81550 82191 . - 0 ID=cds-MDB8827895.1;Parent=gene-PN289_04420;Dbxref=NCBI_GP:MDB8827895.1;Name=MDB8827895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013725403.1;locus_tag=PN289_04420;product=ERF family protein;protein_id=MDB8827895.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 82200 82724 . - . ID=gene-PN289_04425;Name=PN289_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04425 JAQMMZ010000006.1 Protein Homology CDS 82200 82724 . - 0 ID=cds-MDB8827896.1;Parent=gene-PN289_04425;Dbxref=NCBI_GP:MDB8827896.1;Name=MDB8827896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017386.2;locus_tag=PN289_04425;product=siphovirus Gp157 family protein;protein_id=MDB8827896.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 82751 82951 . - . ID=gene-PN289_04430;Name=PN289_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04430 JAQMMZ010000006.1 GeneMarkS-2+ CDS 82751 82951 . - 0 ID=cds-MDB8827897.1;Parent=gene-PN289_04430;Dbxref=NCBI_GP:MDB8827897.1;Name=MDB8827897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04430;product=hypothetical protein;protein_id=MDB8827897.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 83007 83141 . - . ID=gene-PN289_04435;Name=PN289_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04435 JAQMMZ010000006.1 GeneMarkS-2+ CDS 83007 83141 . - 0 ID=cds-MDB8827898.1;Parent=gene-PN289_04435;Dbxref=NCBI_GP:MDB8827898.1;Name=MDB8827898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04435;product=hypothetical protein;protein_id=MDB8827898.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 83154 83528 . - . ID=gene-PN289_04440;Name=PN289_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04440 JAQMMZ010000006.1 GeneMarkS-2+ CDS 83154 83528 . - 0 ID=cds-MDB8827899.1;Parent=gene-PN289_04440;Dbxref=NCBI_GP:MDB8827899.1;Name=MDB8827899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04440;product=hypothetical protein;protein_id=MDB8827899.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 83914 84108 . - . ID=gene-PN289_04445;Name=PN289_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04445 JAQMMZ010000006.1 GeneMarkS-2+ CDS 83914 84108 . - 0 ID=cds-MDB8827900.1;Parent=gene-PN289_04445;Dbxref=NCBI_GP:MDB8827900.1;Name=MDB8827900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04445;product=hypothetical protein;protein_id=MDB8827900.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 84201 84404 . + . ID=gene-PN289_04450;Name=PN289_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04450 JAQMMZ010000006.1 GeneMarkS-2+ CDS 84201 84404 . + 0 ID=cds-MDB8827901.1;Parent=gene-PN289_04450;Dbxref=NCBI_GP:MDB8827901.1;Name=MDB8827901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04450;product=hypothetical protein;protein_id=MDB8827901.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 84510 84743 . - . ID=gene-PN289_04455;Name=PN289_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04455 JAQMMZ010000006.1 Protein Homology CDS 84510 84743 . - 0 ID=cds-MDB8827902.1;Parent=gene-PN289_04455;Dbxref=NCBI_GP:MDB8827902.1;Name=MDB8827902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=PN289_04455;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827902.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 84911 85552 . + . ID=gene-PN289_04460;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PN289_04460 JAQMMZ010000006.1 Protein Homology CDS 84911 85552 . + 0 ID=cds-MDB8827903.1;Parent=gene-PN289_04460;Dbxref=NCBI_GP:MDB8827903.1;Name=MDB8827903.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR00498.1;locus_tag=PN289_04460;product=transcriptional repressor LexA;protein_id=MDB8827903.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 85754 86788 . + . ID=gene-PN289_04465;Name=PN289_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04465 JAQMMZ010000006.1 Protein Homology CDS 85754 86788 . + 0 ID=cds-MDB8827904.1;Parent=gene-PN289_04465;Dbxref=NCBI_GP:MDB8827904.1;Name=MDB8827904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788421.1;locus_tag=PN289_04465;product=cell wall-binding repeat-containing protein;protein_id=MDB8827904.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 86841 87488 . + . ID=gene-PN289_04470;Name=PN289_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04470 JAQMMZ010000006.1 GeneMarkS-2+ CDS 86841 87488 . + 0 ID=cds-MDB8827905.1;Parent=gene-PN289_04470;Dbxref=NCBI_GP:MDB8827905.1;Name=MDB8827905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04470;product=hypothetical protein;protein_id=MDB8827905.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 87475 87819 . + . ID=gene-PN289_04475;Name=PN289_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04475 JAQMMZ010000006.1 GeneMarkS-2+ CDS 87475 87819 . + 0 ID=cds-MDB8827906.1;Parent=gene-PN289_04475;Dbxref=NCBI_GP:MDB8827906.1;Name=MDB8827906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_04475;product=hypothetical protein;protein_id=MDB8827906.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 87944 89002 . + . ID=gene-PN289_04480;Name=PN289_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04480 JAQMMZ010000006.1 Protein Homology CDS 87944 89002 . + 0 ID=cds-MDB8827907.1;Parent=gene-PN289_04480;Dbxref=NCBI_GP:MDB8827907.1;Name=MDB8827907.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PN289_04480;product=site-specific integrase;protein_id=MDB8827907.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 89081 89521 . - . ID=gene-PN289_04485;Name=PN289_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04485 JAQMMZ010000006.1 Protein Homology CDS 89081 89521 . - 0 ID=cds-MDB8827908.1;Parent=gene-PN289_04485;Dbxref=NCBI_GP:MDB8827908.1;Name=MDB8827908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790175.1;locus_tag=PN289_04485;product=GatB/YqeY domain-containing protein;protein_id=MDB8827908.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 89545 89724 . - . ID=gene-PN289_04490;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PN289_04490 JAQMMZ010000006.1 Protein Homology CDS 89545 89724 . - 0 ID=cds-MDB8827909.1;Parent=gene-PN289_04490;Dbxref=NCBI_GP:MDB8827909.1;Name=MDB8827909.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416618.1;locus_tag=PN289_04490;product=30S ribosomal protein S21;protein_id=MDB8827909.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 89847 90191 . - . ID=gene-PN289_04495;Name=PN289_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04495 JAQMMZ010000006.1 Protein Homology CDS 89847 90191 . - 0 ID=cds-MDB8827910.1;Parent=gene-PN289_04495;Dbxref=NCBI_GP:MDB8827910.1;Name=MDB8827910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844485.1;locus_tag=PN289_04495;product=histidine triad nucleotide-binding protein;protein_id=MDB8827910.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 90224 90544 . - . ID=gene-PN289_04500;Name=PN289_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04500 JAQMMZ010000006.1 Protein Homology CDS 90224 90544 . - 0 ID=cds-MDB8827911.1;Parent=gene-PN289_04500;Dbxref=NCBI_GP:MDB8827911.1;Name=MDB8827911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008980221.1;locus_tag=PN289_04500;product=putative heavy metal-binding protein;protein_id=MDB8827911.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 90721 91899 . - . ID=gene-PN289_04505;Name=PN289_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04505 JAQMMZ010000006.1 Protein Homology CDS 90721 91899 . - 0 ID=cds-MDB8827912.1;Parent=gene-PN289_04505;Dbxref=NCBI_GP:MDB8827912.1;Name=MDB8827912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845522.1;locus_tag=PN289_04505;product=transposase;protein_id=MDB8827912.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 91984 93312 . - . ID=gene-PN289_04510;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=PN289_04510 JAQMMZ010000006.1 Protein Homology CDS 91984 93312 . - 0 ID=cds-MDB8827913.1;Parent=gene-PN289_04510;Dbxref=NCBI_GP:MDB8827913.1;Name=MDB8827913.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845523.1;locus_tag=PN289_04510;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=MDB8827913.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 93315 94091 . - . ID=gene-PN289_04515;Name=PN289_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04515 JAQMMZ010000006.1 Protein Homology CDS 93315 94091 . - 0 ID=cds-MDB8827914.1;Parent=gene-PN289_04515;Dbxref=NCBI_GP:MDB8827914.1;Name=MDB8827914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844420.1;locus_tag=PN289_04515;product=RsmE family RNA methyltransferase;protein_id=MDB8827914.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 94133 95077 . - . ID=gene-PN289_04520;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PN289_04520 JAQMMZ010000006.1 Protein Homology CDS 94133 95077 . - 0 ID=cds-MDB8827915.1;Parent=gene-PN289_04520;Dbxref=NCBI_GP:MDB8827915.1;Name=MDB8827915.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845525.1;locus_tag=PN289_04520;product=50S ribosomal protein L11 methyltransferase;protein_id=MDB8827915.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 95088 95915 . - . ID=gene-PN289_04525;Name=PN289_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04525 JAQMMZ010000006.1 Protein Homology CDS 95088 95915 . - 0 ID=cds-MDB8827916.1;Parent=gene-PN289_04525;Dbxref=NCBI_GP:MDB8827916.1;Name=MDB8827916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844541.1;locus_tag=PN289_04525;product=exodeoxyribonuclease III;protein_id=MDB8827916.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 96160 97317 . + . ID=gene-PN289_04530;Name=PN289_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04530 JAQMMZ010000006.1 Protein Homology CDS 96160 97317 . + 0 ID=cds-MDB8827917.1;Parent=gene-PN289_04530;Dbxref=NCBI_GP:MDB8827917.1;Name=MDB8827917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595396.1;locus_tag=PN289_04530;product=acyltransferase;protein_id=MDB8827917.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 97416 98594 . - . ID=gene-PN289_04535;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PN289_04535 JAQMMZ010000006.1 Protein Homology CDS 97416 98594 . - 0 ID=cds-MDB8827918.1;Parent=gene-PN289_04535;Dbxref=NCBI_GP:MDB8827918.1;Name=MDB8827918.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595395.1;locus_tag=PN289_04535;product=molecular chaperone DnaJ;protein_id=MDB8827918.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 98735 100573 . - . ID=gene-PN289_04540;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PN289_04540 JAQMMZ010000006.1 Protein Homology CDS 98735 100573 . - 0 ID=cds-MDB8827919.1;Parent=gene-PN289_04540;Dbxref=NCBI_GP:MDB8827919.1;Name=MDB8827919.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003430934.1;locus_tag=PN289_04540;product=molecular chaperone DnaK;protein_id=MDB8827919.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 100651 101286 . - . ID=gene-PN289_04545;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PN289_04545 JAQMMZ010000006.1 Protein Homology CDS 100651 101286 . - 0 ID=cds-MDB8827920.1;Parent=gene-PN289_04545;Dbxref=NCBI_GP:MDB8827920.1;Name=MDB8827920.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844452.1;locus_tag=PN289_04545;product=nucleotide exchange factor GrpE;protein_id=MDB8827920.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 101309 102325 . - . ID=gene-PN289_04550;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=PN289_04550 JAQMMZ010000006.1 Protein Homology CDS 101309 102325 . - 0 ID=cds-MDB8827921.1;Parent=gene-PN289_04550;Dbxref=NCBI_GP:MDB8827921.1;Name=MDB8827921.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845531.1;locus_tag=PN289_04550;product=heat-inducible transcriptional repressor HrcA;protein_id=MDB8827921.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 102617 103492 . - . ID=gene-PN289_04555;Name=PN289_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04555 JAQMMZ010000006.1 Protein Homology CDS 102617 103492 . - 0 ID=cds-MDB8827922.1;Parent=gene-PN289_04555;Dbxref=NCBI_GP:MDB8827922.1;Name=MDB8827922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844508.1;locus_tag=PN289_04555;product=YitT family protein;protein_id=MDB8827922.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 103663 105026 . - . ID=gene-PN289_04560;Name=PN289_04560;end_range=105026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04560;partial=true JAQMMZ010000006.1 Protein Homology CDS 103663 105026 . - 2 ID=cds-MDB8827923.1;Parent=gene-PN289_04560;Dbxref=NCBI_GP:MDB8827923.1;Name=MDB8827923.1;end_range=105026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844906.1;locus_tag=PN289_04560;partial=true;product=cell wall-binding repeat-containing protein;protein_id=MDB8827923.1;transl_table=11 JAQMMZ010000006.1 Genbank gene 105125 106073 . - . ID=gene-PN289_04565;Name=PN289_04565;end_range=106073,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04565;partial=true;start_range=.,105125 JAQMMZ010000006.1 Protein Homology CDS 105125 106073 . - 1 ID=cds-MDB8827924.1;Parent=gene-PN289_04565;Dbxref=NCBI_GP:MDB8827924.1;Name=MDB8827924.1;end_range=106073,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040145.1;locus_tag=PN289_04565;partial=true;product=adhesin;protein_id=MDB8827924.1;start_range=.,105125;transl_table=11 ##sequence-region JAQMMZ010000007.1 1 75910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000007.1 Genbank region 1 75910 . + . ID=JAQMMZ010000007.1:1..75910;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000007.1 Genbank gene 173 937 . + . ID=gene-PN289_04570;Name=PN289_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04570 JAQMMZ010000007.1 Protein Homology CDS 173 937 . + 0 ID=cds-MDB8827925.1;Parent=gene-PN289_04570;Dbxref=NCBI_GP:MDB8827925.1;Name=MDB8827925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843309.1;locus_tag=PN289_04570;product=class I SAM-dependent methyltransferase;protein_id=MDB8827925.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 1078 1953 . + . ID=gene-PN289_04575;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PN289_04575 JAQMMZ010000007.1 Protein Homology CDS 1078 1953 . + 0 ID=cds-MDB8827926.1;Parent=gene-PN289_04575;Dbxref=NCBI_GP:MDB8827926.1;Name=MDB8827926.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843323.1;locus_tag=PN289_04575;product=Hsp33 family molecular chaperone HslO;protein_id=MDB8827926.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 2039 2773 . + . ID=gene-PN289_04580;Name=PN289_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04580 JAQMMZ010000007.1 Protein Homology CDS 2039 2773 . + 0 ID=cds-MDB8827927.1;Parent=gene-PN289_04580;Dbxref=NCBI_GP:MDB8827927.1;Name=MDB8827927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843314.1;locus_tag=PN289_04580;product=pseudouridine synthase;protein_id=MDB8827927.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 2881 4254 . + . ID=gene-PN289_04585;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PN289_04585 JAQMMZ010000007.1 Protein Homology CDS 2881 4254 . + 0 ID=cds-MDB8827928.1;Parent=gene-PN289_04585;Dbxref=NCBI_GP:MDB8827928.1;Name=MDB8827928.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790813.1;locus_tag=PN289_04585;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MDB8827928.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 4663 5394 . + . ID=gene-PN289_04590;Name=erm(A);gbkey=Gene;gene=erm(A);gene_biotype=protein_coding;locus_tag=PN289_04590 JAQMMZ010000007.1 Protein Homology CDS 4663 5394 . + 0 ID=cds-MDB8827929.1;Parent=gene-PN289_04590;Dbxref=NCBI_GP:MDB8827929.1;Name=MDB8827929.1;gbkey=CDS;gene=erm(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810833.1;locus_tag=PN289_04590;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A);protein_id=MDB8827929.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 5611 6135 . + . ID=gene-PN289_04595;Name=PN289_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04595 JAQMMZ010000007.1 Protein Homology CDS 5611 6135 . + 0 ID=cds-MDB8827930.1;Parent=gene-PN289_04595;Dbxref=NCBI_GP:MDB8827930.1;Name=MDB8827930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176020.1;locus_tag=PN289_04595;product=phosphotransferase;protein_id=MDB8827930.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 6181 6570 . + . ID=gene-PN289_04600;Name=PN289_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04600 JAQMMZ010000007.1 Protein Homology CDS 6181 6570 . + 0 ID=cds-MDB8827931.1;Parent=gene-PN289_04600;Dbxref=NCBI_GP:MDB8827931.1;Name=MDB8827931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019117958.1;locus_tag=PN289_04600;product=cytidine deaminase;protein_id=MDB8827931.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 6561 7253 . + . ID=gene-PN289_04605;Name=PN289_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04605 JAQMMZ010000007.1 Protein Homology CDS 6561 7253 . + 0 ID=cds-MDB8827932.1;Parent=gene-PN289_04605;Dbxref=NCBI_GP:MDB8827932.1;Name=MDB8827932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019108018.1;locus_tag=PN289_04605;product=MBL fold metallo-hydrolase;protein_id=MDB8827932.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 7413 8309 . + . ID=gene-PN289_04610;Name=PN289_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04610 JAQMMZ010000007.1 Protein Homology CDS 7413 8309 . + 0 ID=cds-MDB8827933.1;Parent=gene-PN289_04610;Dbxref=NCBI_GP:MDB8827933.1;Name=MDB8827933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843318.1;locus_tag=PN289_04610;product=GIY-YIG nuclease family protein;protein_id=MDB8827933.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 8566 8880 . - . ID=gene-PN289_04615;Name=PN289_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04615 JAQMMZ010000007.1 Protein Homology CDS 8566 8880 . - 0 ID=cds-MDB8827934.1;Parent=gene-PN289_04615;Dbxref=NCBI_GP:MDB8827934.1;Name=MDB8827934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846677.1;locus_tag=PN289_04615;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MDB8827934.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 8867 9139 . - . ID=gene-PN289_04620;Name=PN289_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04620 JAQMMZ010000007.1 Protein Homology CDS 8867 9139 . - 0 ID=cds-MDB8827935.1;Parent=gene-PN289_04620;Dbxref=NCBI_GP:MDB8827935.1;Name=MDB8827935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846676.1;locus_tag=PN289_04620;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=MDB8827935.1;transl_table=11 JAQMMZ010000007.1 Genbank pseudogene 9431 9589 . - . ID=gene-PN289_04625;Name=PN289_04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04625;pseudo=true JAQMMZ010000007.1 Protein Homology CDS 9431 9589 . - 0 ID=cds-PN289_04625;Parent=gene-PN289_04625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016207469.1;locus_tag=PN289_04625;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000007.1 Genbank gene 10022 10336 . + . ID=gene-PN289_04630;Name=PN289_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04630 JAQMMZ010000007.1 Protein Homology CDS 10022 10336 . + 0 ID=cds-MDB8827936.1;Parent=gene-PN289_04630;Dbxref=NCBI_GP:MDB8827936.1;Name=MDB8827936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.2;locus_tag=PN289_04630;product=DUF2326 domain-containing protein;protein_id=MDB8827936.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 10353 10580 . + . ID=gene-PN289_04635;Name=PN289_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04635 JAQMMZ010000007.1 Protein Homology CDS 10353 10580 . + 0 ID=cds-MDB8827937.1;Parent=gene-PN289_04635;Dbxref=NCBI_GP:MDB8827937.1;Name=MDB8827937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015566129.1;locus_tag=PN289_04635;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827937.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 10601 11230 . + . ID=gene-PN289_04640;Name=PN289_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04640 JAQMMZ010000007.1 Protein Homology CDS 10601 11230 . + 0 ID=cds-MDB8827938.1;Parent=gene-PN289_04640;Dbxref=NCBI_GP:MDB8827938.1;Name=MDB8827938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015566130.1;locus_tag=PN289_04640;product=DUF1819 family protein;protein_id=MDB8827938.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 11245 11802 . + . ID=gene-PN289_04645;Name=PN289_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04645 JAQMMZ010000007.1 Protein Homology CDS 11245 11802 . + 0 ID=cds-MDB8827939.1;Parent=gene-PN289_04645;Dbxref=NCBI_GP:MDB8827939.1;Name=MDB8827939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002585534.1;locus_tag=PN289_04645;product=DUF1788 domain-containing protein;protein_id=MDB8827939.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 11815 15369 . + . ID=gene-PN289_04650;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=protein_coding;locus_tag=PN289_04650 JAQMMZ010000007.1 Protein Homology CDS 11815 15369 . + 0 ID=cds-MDB8827940.1;Parent=gene-PN289_04650;Dbxref=NCBI_GP:MDB8827940.1;Name=MDB8827940.1;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002585535.1;locus_tag=PN289_04650;product=BREX system P-loop protein BrxC;protein_id=MDB8827940.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 15380 18934 . + . ID=gene-PN289_04655;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=PN289_04655 JAQMMZ010000007.1 Protein Homology CDS 15380 18934 . + 0 ID=cds-MDB8827941.1;Parent=gene-PN289_04655;Dbxref=NCBI_GP:MDB8827941.1;Name=MDB8827941.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=pglX;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002585537.1;locus_tag=PN289_04655;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=MDB8827941.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 18949 20004 . + . ID=gene-PN289_04660;Name=PN289_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04660 JAQMMZ010000007.1 Protein Homology CDS 18949 20004 . + 0 ID=cds-MDB8827942.1;Parent=gene-PN289_04660;Dbxref=NCBI_GP:MDB8827942.1;Name=MDB8827942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=PN289_04660;product=toll/interleukin-1 receptor domain-containing protein;protein_id=MDB8827942.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 20026 22623 . + . ID=gene-PN289_04665;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=PN289_04665 JAQMMZ010000007.1 Protein Homology CDS 20026 22623 . + 0 ID=cds-MDB8827943.1;Parent=gene-PN289_04665;Dbxref=NCBI_GP:MDB8827943.1;Name=MDB8827943.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pglZ;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009243536.1;locus_tag=PN289_04665;product=BREX-1 system phosphatase PglZ type A;protein_id=MDB8827943.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 22647 24713 . + . ID=gene-PN289_04670;Name=brxL;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=PN289_04670 JAQMMZ010000007.1 Protein Homology CDS 22647 24713 . + 0 ID=cds-MDB8827944.1;Parent=gene-PN289_04670;Dbxref=NCBI_GP:MDB8827944.1;Name=MDB8827944.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;gene=brxL;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015566138.1;locus_tag=PN289_04670;product=protease Lon-related BREX system protein BrxL;protein_id=MDB8827944.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 24728 25738 . + . ID=gene-PN289_04675;Name=PN289_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04675 JAQMMZ010000007.1 Protein Homology CDS 24728 25738 . + 0 ID=cds-MDB8827945.1;Parent=gene-PN289_04675;Dbxref=NCBI_GP:MDB8827945.1;Name=MDB8827945.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014314877.1;locus_tag=PN289_04675;product=restriction endonuclease;protein_id=MDB8827945.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 26501 26629 . + . ID=gene-PN289_04680;Name=PN289_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04680 JAQMMZ010000007.1 Protein Homology CDS 26501 26629 . + 0 ID=cds-MDB8827946.1;Parent=gene-PN289_04680;Dbxref=NCBI_GP:MDB8827946.1;Name=MDB8827946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009219267.1;locus_tag=PN289_04680;product=hypothetical protein;protein_id=MDB8827946.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 26817 27227 . - . ID=gene-PN289_04685;Name=PN289_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04685 JAQMMZ010000007.1 Protein Homology CDS 26817 27227 . - 0 ID=cds-MDB8827947.1;Parent=gene-PN289_04685;Dbxref=NCBI_GP:MDB8827947.1;Name=MDB8827947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595223.1;locus_tag=PN289_04685;product=TOBE domain-containing protein;protein_id=MDB8827947.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 27598 28308 . + . ID=gene-PN289_04690;Name=PN289_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04690 JAQMMZ010000007.1 Protein Homology CDS 27598 28308 . + 0 ID=cds-MDB8827948.1;Parent=gene-PN289_04690;Dbxref=NCBI_GP:MDB8827948.1;Name=MDB8827948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595222.1;locus_tag=PN289_04690;product=ABC transporter ATP-binding protein;protein_id=MDB8827948.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 28319 30775 . + . ID=gene-PN289_04695;Name=PN289_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04695 JAQMMZ010000007.1 Protein Homology CDS 28319 30775 . + 0 ID=cds-MDB8827949.1;Parent=gene-PN289_04695;Dbxref=NCBI_GP:MDB8827949.1;Name=MDB8827949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845563.1;locus_tag=PN289_04695;product=ABC transporter permease;protein_id=MDB8827949.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 30835 31422 . + . ID=gene-PN289_04700;Name=PN289_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04700 JAQMMZ010000007.1 Protein Homology CDS 30835 31422 . + 0 ID=cds-MDB8827950.1;Parent=gene-PN289_04700;Dbxref=NCBI_GP:MDB8827950.1;Name=MDB8827950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595221.1;locus_tag=PN289_04700;product=hypothetical protein;protein_id=MDB8827950.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 31424 32305 . + . ID=gene-PN289_04705;Name=PN289_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04705 JAQMMZ010000007.1 Protein Homology CDS 31424 32305 . + 0 ID=cds-MDB8827951.1;Parent=gene-PN289_04705;Dbxref=NCBI_GP:MDB8827951.1;Name=MDB8827951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845560.1;locus_tag=PN289_04705;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=MDB8827951.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 32462 33043 . + . ID=gene-PN289_04710;Name=PN289_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04710 JAQMMZ010000007.1 Protein Homology CDS 32462 33043 . + 0 ID=cds-MDB8827952.1;Parent=gene-PN289_04710;Dbxref=NCBI_GP:MDB8827952.1;Name=MDB8827952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843360.1;locus_tag=PN289_04710;product=glycerol-3-phosphate responsive antiterminator;protein_id=MDB8827952.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 33214 33915 . + . ID=gene-PN289_04715;Name=PN289_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04715 JAQMMZ010000007.1 Protein Homology CDS 33214 33915 . + 0 ID=cds-MDB8827953.1;Parent=gene-PN289_04715;Dbxref=NCBI_GP:MDB8827953.1;Name=MDB8827953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845559.1;locus_tag=PN289_04715;product=aquaporin family protein;protein_id=MDB8827953.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 34041 35546 . + . ID=gene-PN289_04720;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PN289_04720 JAQMMZ010000007.1 Protein Homology CDS 34041 35546 . + 0 ID=cds-MDB8827954.1;Parent=gene-PN289_04720;Dbxref=NCBI_GP:MDB8827954.1;Name=MDB8827954.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844018.1;locus_tag=PN289_04720;product=glycerol kinase GlpK;protein_id=MDB8827954.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 35711 37144 . + . ID=gene-PN289_04725;Name=PN289_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04725 JAQMMZ010000007.1 Protein Homology CDS 35711 37144 . + 0 ID=cds-MDB8827955.1;Parent=gene-PN289_04725;Dbxref=NCBI_GP:MDB8827955.1;Name=MDB8827955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845557.1;locus_tag=PN289_04725;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=MDB8827955.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 37153 38412 . + . ID=gene-PN289_04730;Name=PN289_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04730 JAQMMZ010000007.1 Protein Homology CDS 37153 38412 . + 0 ID=cds-MDB8827956.1;Parent=gene-PN289_04730;Dbxref=NCBI_GP:MDB8827956.1;Name=MDB8827956.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845556.1;locus_tag=PN289_04730;product=FAD-dependent oxidoreductase;protein_id=MDB8827956.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 38402 38767 . + . ID=gene-PN289_04735;Name=PN289_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04735 JAQMMZ010000007.1 Protein Homology CDS 38402 38767 . + 0 ID=cds-MDB8827957.1;Parent=gene-PN289_04735;Dbxref=NCBI_GP:MDB8827957.1;Name=MDB8827957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844000.1;locus_tag=PN289_04735;product=DUF1667 domain-containing protein;protein_id=MDB8827957.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 38913 39584 . + . ID=gene-PN289_04740;Name=PN289_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04740 JAQMMZ010000007.1 Protein Homology CDS 38913 39584 . + 0 ID=cds-MDB8827958.1;Parent=gene-PN289_04740;Dbxref=NCBI_GP:MDB8827958.1;Name=MDB8827958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845554.1;locus_tag=PN289_04740;product=Crp/Fnr family transcriptional regulator;protein_id=MDB8827958.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 39673 40293 . - . ID=gene-PN289_04745;Name=PN289_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04745 JAQMMZ010000007.1 Protein Homology CDS 39673 40293 . - 0 ID=cds-MDB8827959.1;Parent=gene-PN289_04745;Dbxref=NCBI_GP:MDB8827959.1;Name=MDB8827959.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845553.1;locus_tag=PN289_04745;product=ECF transporter S component;protein_id=MDB8827959.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 40304 41014 . - . ID=gene-PN289_04750;Name=PN289_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04750 JAQMMZ010000007.1 Protein Homology CDS 40304 41014 . - 0 ID=cds-MDB8827960.1;Parent=gene-PN289_04750;Dbxref=NCBI_GP:MDB8827960.1;Name=MDB8827960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843978.1;locus_tag=PN289_04750;product=TIGR02206 family membrane protein;protein_id=MDB8827960.1;transl_table=11 JAQMMZ010000007.1 cmsearch riboswitch 41370 41466 . + . ID=id-JAQMMZ010000007.1:41370..41466;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000007.1 Genbank gene 41534 42862 . + . ID=gene-PN289_04755;Name=PN289_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04755 JAQMMZ010000007.1 Protein Homology CDS 41534 42862 . + 0 ID=cds-MDB8827961.1;Parent=gene-PN289_04755;Dbxref=NCBI_GP:MDB8827961.1;Name=MDB8827961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845551.1;locus_tag=PN289_04755;product=nucleobase:cation symporter-2 family protein;protein_id=MDB8827961.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 42884 43456 . + . ID=gene-PN289_04760;Name=PN289_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04760 JAQMMZ010000007.1 Protein Homology CDS 42884 43456 . + 0 ID=cds-MDB8827962.1;Parent=gene-PN289_04760;Dbxref=NCBI_GP:MDB8827962.1;Name=MDB8827962.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844015.1;locus_tag=PN289_04760;product=xanthine phosphoribosyltransferase;protein_id=MDB8827962.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 43827 44219 . + . ID=gene-PN289_04765;Name=PN289_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04765 JAQMMZ010000007.1 Protein Homology CDS 43827 44219 . + 0 ID=cds-MDB8827963.1;Parent=gene-PN289_04765;Dbxref=NCBI_GP:MDB8827963.1;Name=MDB8827963.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843974.1;locus_tag=PN289_04765;product=GntR family transcriptional regulator;protein_id=MDB8827963.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 44289 45743 . + . ID=gene-PN289_04770;Name=PN289_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04770 JAQMMZ010000007.1 Protein Homology CDS 44289 45743 . + 0 ID=cds-MDB8827964.1;Parent=gene-PN289_04770;Dbxref=NCBI_GP:MDB8827964.1;Name=MDB8827964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844011.1;locus_tag=PN289_04770;product=hypothetical protein;protein_id=MDB8827964.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 45912 46475 . + . ID=gene-PN289_04775;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PN289_04775 JAQMMZ010000007.1 Protein Homology CDS 45912 46475 . + 0 ID=cds-MDB8827965.1;Parent=gene-PN289_04775;Dbxref=NCBI_GP:MDB8827965.1;Name=MDB8827965.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477110.1;locus_tag=PN289_04775;product=alkyl hydroperoxide reductase subunit C;protein_id=MDB8827965.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 46647 47645 . + . ID=gene-PN289_04780;Name=PN289_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04780 JAQMMZ010000007.1 Protein Homology CDS 46647 47645 . + 0 ID=cds-MDB8827966.1;Parent=gene-PN289_04780;Dbxref=NCBI_GP:MDB8827966.1;Name=MDB8827966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843976.1;locus_tag=PN289_04780;product=ABC transporter substrate-binding protein;protein_id=MDB8827966.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 47617 48405 . + . ID=gene-PN289_04785;Name=PN289_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04785 JAQMMZ010000007.1 Protein Homology CDS 47617 48405 . + 0 ID=cds-MDB8827967.1;Parent=gene-PN289_04785;Dbxref=NCBI_GP:MDB8827967.1;Name=MDB8827967.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845546.1;locus_tag=PN289_04785;product=ABC transporter permease subunit;protein_id=MDB8827967.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 48446 49030 . + . ID=gene-PN289_04790;Name=PN289_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04790 JAQMMZ010000007.1 Protein Homology CDS 48446 49030 . + 0 ID=cds-MDB8827968.1;Parent=gene-PN289_04790;Dbxref=NCBI_GP:MDB8827968.1;Name=MDB8827968.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843990.1;locus_tag=PN289_04790;product=ATP-binding cassette domain-containing protein;protein_id=MDB8827968.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 49139 50065 . + . ID=gene-PN289_04795;Name=PN289_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04795 JAQMMZ010000007.1 Protein Homology CDS 49139 50065 . + 0 ID=cds-MDB8827969.1;Parent=gene-PN289_04795;Dbxref=NCBI_GP:MDB8827969.1;Name=MDB8827969.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844008.1;locus_tag=PN289_04795;product=AEC family transporter;protein_id=MDB8827969.1;transl_table=11 JAQMMZ010000007.1 cmsearch riboswitch 50192 50297 . + . ID=id-JAQMMZ010000007.1:50192..50297;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch JAQMMZ010000007.1 Genbank gene 50404 51234 . + . ID=gene-PN289_04800;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PN289_04800 JAQMMZ010000007.1 Protein Homology CDS 50404 51234 . + 0 ID=cds-MDB8827970.1;Parent=gene-PN289_04800;Dbxref=NCBI_GP:MDB8827970.1;Name=MDB8827970.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844022.1;locus_tag=PN289_04800;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=MDB8827970.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 51283 51912 . + . ID=gene-PN289_04805;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PN289_04805 JAQMMZ010000007.1 Protein Homology CDS 51283 51912 . + 0 ID=cds-MDB8827971.1;Parent=gene-PN289_04805;Dbxref=NCBI_GP:MDB8827971.1;Name=MDB8827971.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844004.1;locus_tag=PN289_04805;product=thiamine phosphate synthase;protein_id=MDB8827971.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 52032 53342 . + . ID=gene-PN289_04810;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PN289_04810 JAQMMZ010000007.1 Protein Homology CDS 52032 53342 . + 0 ID=cds-MDB8827972.1;Parent=gene-PN289_04810;Dbxref=NCBI_GP:MDB8827972.1;Name=MDB8827972.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843993.1;locus_tag=PN289_04810;product=phosphomethylpyrimidine synthase ThiC;protein_id=MDB8827972.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 53619 54056 . + . ID=gene-PN289_04815;Name=PN289_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04815 JAQMMZ010000007.1 Protein Homology CDS 53619 54056 . + 0 ID=cds-MDB8827973.1;Parent=gene-PN289_04815;Dbxref=NCBI_GP:MDB8827973.1;Name=MDB8827973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845540.1;locus_tag=PN289_04815;product=Rrf2 family transcriptional regulator;protein_id=MDB8827973.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 54121 56100 . + . ID=gene-PN289_04820;Name=PN289_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04820 JAQMMZ010000007.1 Protein Homology CDS 54121 56100 . + 0 ID=cds-MDB8827974.1;Parent=gene-PN289_04820;Dbxref=NCBI_GP:MDB8827974.1;Name=MDB8827974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844001.1;locus_tag=PN289_04820;product=C39 family peptidase;protein_id=MDB8827974.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 56801 58096 . + . ID=gene-PN289_04825;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PN289_04825 JAQMMZ010000007.1 Protein Homology CDS 56801 58096 . + 0 ID=cds-MDB8827975.1;Parent=gene-PN289_04825;Dbxref=NCBI_GP:MDB8827975.1;Name=MDB8827975.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845536.1;locus_tag=PN289_04825;product=branched-chain amino acid transport system II carrier protein;protein_id=MDB8827975.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 58286 58834 . + . ID=gene-PN289_04830;Name=PN289_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04830 JAQMMZ010000007.1 Protein Homology CDS 58286 58834 . + 0 ID=cds-MDB8827976.1;Parent=gene-PN289_04830;Dbxref=NCBI_GP:MDB8827976.1;Name=MDB8827976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844006.1;locus_tag=PN289_04830;product=hypothetical protein;protein_id=MDB8827976.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 58884 59183 . + . ID=gene-PN289_04835;Name=PN289_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04835 JAQMMZ010000007.1 Protein Homology CDS 58884 59183 . + 0 ID=cds-MDB8827977.1;Parent=gene-PN289_04835;Dbxref=NCBI_GP:MDB8827977.1;Name=MDB8827977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844003.1;locus_tag=PN289_04835;product=MTH1187 family thiamine-binding protein;protein_id=MDB8827977.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 59342 60520 . + . ID=gene-PN289_04840;Name=PN289_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04840 JAQMMZ010000007.1 Protein Homology CDS 59342 60520 . + 0 ID=cds-MDB8827978.1;Parent=gene-PN289_04840;Dbxref=NCBI_GP:MDB8827978.1;Name=MDB8827978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844020.1;locus_tag=PN289_04840;product=SAM-dependent methyltransferase;protein_id=MDB8827978.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 60733 61938 . + . ID=gene-PN289_04845;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=PN289_04845 JAQMMZ010000007.1 Protein Homology CDS 60733 61938 . + 0 ID=cds-MDB8827979.1;Parent=gene-PN289_04845;Dbxref=NCBI_GP:MDB8827979.1;Name=MDB8827979.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843980.1;locus_tag=PN289_04845;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=MDB8827979.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 62024 62146 . + . ID=gene-PN289_04850;Name=PN289_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04850 JAQMMZ010000007.1 Protein Homology CDS 62024 62146 . + 0 ID=cds-MDB8827980.1;Parent=gene-PN289_04850;Dbxref=NCBI_GP:MDB8827980.1;Name=MDB8827980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018590837.1;locus_tag=PN289_04850;product=hypothetical protein;protein_id=MDB8827980.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 62155 63738 . + . ID=gene-PN289_04855;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=PN289_04855 JAQMMZ010000007.1 Protein Homology CDS 62155 63738 . + 0 ID=cds-MDB8827981.1;Parent=gene-PN289_04855;Dbxref=NCBI_GP:MDB8827981.1;Name=MDB8827981.1;gbkey=CDS;gene=dltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843986.1;locus_tag=PN289_04855;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=MDB8827981.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 63748 64938 . + . ID=gene-PN289_04860;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=PN289_04860 JAQMMZ010000007.1 Protein Homology CDS 63748 64938 . + 0 ID=cds-MDB8827982.1;Parent=gene-PN289_04860;Dbxref=NCBI_GP:MDB8827982.1;Name=MDB8827982.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844007.1;locus_tag=PN289_04860;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=MDB8827982.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 65021 65248 . + . ID=gene-PN289_04865;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=PN289_04865 JAQMMZ010000007.1 Protein Homology CDS 65021 65248 . + 0 ID=cds-MDB8827983.1;Parent=gene-PN289_04865;Dbxref=NCBI_GP:MDB8827983.1;Name=MDB8827983.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltC;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003374498.1;locus_tag=PN289_04865;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=MDB8827983.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 65558 67930 . + . ID=gene-PN289_04870;Name=PN289_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04870 JAQMMZ010000007.1 Protein Homology CDS 65558 67930 . + 0 ID=cds-MDB8827984.1;Parent=gene-PN289_04870;Dbxref=NCBI_GP:MDB8827984.1;Name=MDB8827984.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595653.1;locus_tag=PN289_04870;product=L%2CD-transpeptidase family protein;protein_id=MDB8827984.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 68288 70402 . + . ID=gene-PN289_04875;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PN289_04875 JAQMMZ010000007.1 Protein Homology CDS 68288 70402 . + 0 ID=cds-MDB8827985.1;Parent=gene-PN289_04875;Dbxref=NCBI_GP:MDB8827985.1;Name=MDB8827985.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843995.1;locus_tag=PN289_04875;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=MDB8827985.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 70417 71430 . + . ID=gene-PN289_04880;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PN289_04880 JAQMMZ010000007.1 Protein Homology CDS 70417 71430 . + 0 ID=cds-MDB8827986.1;Parent=gene-PN289_04880;Dbxref=NCBI_GP:MDB8827986.1;Name=MDB8827986.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843991.1;locus_tag=PN289_04880;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=MDB8827986.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 71713 72444 . - . ID=gene-PN289_04885;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PN289_04885 JAQMMZ010000007.1 Protein Homology CDS 71713 72444 . - 0 ID=cds-MDB8827987.1;Parent=gene-PN289_04885;Dbxref=NCBI_GP:MDB8827987.1;Name=MDB8827987.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843982.1;locus_tag=PN289_04885;product=pyruvate formate-lyase-activating protein;protein_id=MDB8827987.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 72517 74748 . - . ID=gene-PN289_04890;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=PN289_04890 JAQMMZ010000007.1 Protein Homology CDS 72517 74748 . - 0 ID=cds-MDB8827988.1;Parent=gene-PN289_04890;Dbxref=NCBI_GP:MDB8827988.1;Name=MDB8827988.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888568.1;locus_tag=PN289_04890;product=formate C-acetyltransferase;protein_id=MDB8827988.1;transl_table=11 JAQMMZ010000007.1 Genbank gene 75698 75910 . + . ID=gene-PN289_04895;Name=PN289_04895;end_range=75910,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=PN289_04895;partial=true JAQMMZ010000007.1 cmsearch rRNA 75698 75910 . + . ID=rna-PN289_04895;Parent=gene-PN289_04895;Dbxref=RFAM:RF00177;end_range=75910,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_04895;partial=true;product=16S ribosomal RNA JAQMMZ010000007.1 cmsearch exon 75698 75910 . + . ID=exon-PN289_04895-1;Parent=rna-PN289_04895;Dbxref=RFAM:RF00177;end_range=75910,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PN289_04895;partial=true;product=16S ribosomal RNA ##sequence-region JAQMMZ010000008.1 1 75780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000008.1 Genbank region 1 75780 . + . ID=JAQMMZ010000008.1:1..75780;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000008.1 Genbank gene 859 1269 . - . ID=gene-PN289_04900;Name=PN289_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04900 JAQMMZ010000008.1 Protein Homology CDS 859 1269 . - 0 ID=cds-MDB8827989.1;Parent=gene-PN289_04900;Dbxref=NCBI_GP:MDB8827989.1;Name=MDB8827989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004634151.1;locus_tag=PN289_04900;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8827989.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 1501 3249 . - . ID=gene-PN289_04905;Name=PN289_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04905 JAQMMZ010000008.1 Protein Homology CDS 1501 3249 . - 0 ID=cds-MDB8827990.1;Parent=gene-PN289_04905;Dbxref=NCBI_GP:MDB8827990.1;Name=MDB8827990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270455.1;locus_tag=PN289_04905;product=ABC transporter ATP-binding protein;protein_id=MDB8827990.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 3249 5018 . - . ID=gene-PN289_04910;Name=PN289_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04910 JAQMMZ010000008.1 Protein Homology CDS 3249 5018 . - 0 ID=cds-MDB8827991.1;Parent=gene-PN289_04910;Dbxref=NCBI_GP:MDB8827991.1;Name=MDB8827991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009082842.1;locus_tag=PN289_04910;product=ABC transporter ATP-binding protein;protein_id=MDB8827991.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 5115 6071 . - . ID=gene-PN289_04915;Name=PN289_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04915 JAQMMZ010000008.1 Protein Homology CDS 5115 6071 . - 0 ID=cds-MDB8827992.1;Parent=gene-PN289_04915;Dbxref=NCBI_GP:MDB8827992.1;Name=MDB8827992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270430.1;locus_tag=PN289_04915;product=AraC family transcriptional regulator;protein_id=MDB8827992.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 6074 7546 . - . ID=gene-PN289_04920;Name=PN289_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04920 JAQMMZ010000008.1 Protein Homology CDS 6074 7546 . - 0 ID=cds-MDB8827993.1;Parent=gene-PN289_04920;Dbxref=NCBI_GP:MDB8827993.1;Name=MDB8827993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270441.1;locus_tag=PN289_04920;product=ABC transporter ATP-binding protein;protein_id=MDB8827993.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 7556 8272 . - . ID=gene-PN289_04925;Name=PN289_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04925 JAQMMZ010000008.1 Protein Homology CDS 7556 8272 . - 0 ID=cds-MDB8827994.1;Parent=gene-PN289_04925;Dbxref=NCBI_GP:MDB8827994.1;Name=MDB8827994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009083000.1;locus_tag=PN289_04925;product=energy-coupling factor transporter transmembrane component T;protein_id=MDB8827994.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 8272 8859 . - . ID=gene-PN289_04930;Name=PN289_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04930 JAQMMZ010000008.1 Protein Homology CDS 8272 8859 . - 0 ID=cds-MDB8827995.1;Parent=gene-PN289_04930;Dbxref=NCBI_GP:MDB8827995.1;Name=MDB8827995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004623794.1;locus_tag=PN289_04930;product=MptD family putative ECF transporter S component;protein_id=MDB8827995.1;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 9225 9580 . + . ID=gene-PN289_04935;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=pseudogene;locus_tag=PN289_04935;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 9225 9580 . + 0 ID=cds-PN289_04935;Parent=gene-PN289_04935;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026808.1;locus_tag=PN289_04935;product=plasmid mobilization relaxosome protein MobC;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 9582 9731 . + . ID=gene-PN289_04940;Name=PN289_04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04940;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 9582 9731 . + 0 ID=cds-PN289_04940;Parent=gene-PN289_04940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018671.1;locus_tag=PN289_04940;product=endonuclease;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 9966 10243 . - . ID=gene-PN289_04945;Name=PN289_04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04945;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 9966 10243 . - 0 ID=cds-PN289_04945;Parent=gene-PN289_04945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019213943.1;locus_tag=PN289_04945;product=type II toxin-antitoxin system YafQ family toxin;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank gene 10233 10505 . - . ID=gene-PN289_04950;Name=PN289_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04950 JAQMMZ010000008.1 Protein Homology CDS 10233 10505 . - 0 ID=cds-MDB8827996.1;Parent=gene-PN289_04950;Dbxref=NCBI_GP:MDB8827996.1;Name=MDB8827996.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019213944.1;locus_tag=PN289_04950;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MDB8827996.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 11337 11690 . - . ID=gene-PN289_04955;Name=PN289_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04955 JAQMMZ010000008.1 Protein Homology CDS 11337 11690 . - 0 ID=cds-MDB8827997.1;Parent=gene-PN289_04955;Dbxref=NCBI_GP:MDB8827997.1;Name=MDB8827997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009265988.1;locus_tag=PN289_04955;product=helix-turn-helix transcriptional regulator;protein_id=MDB8827997.1;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 12065 12244 . + . ID=gene-PN289_04960;Name=PN289_04960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04960;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 12065 12244 . + 0 ID=cds-PN289_04960;Parent=gene-PN289_04960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558081.1;locus_tag=PN289_04960;product=IS30 family transposase;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank gene 12418 14154 . - . ID=gene-PN289_04965;Name=PN289_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04965 JAQMMZ010000008.1 Protein Homology CDS 12418 14154 . - 0 ID=cds-MDB8827998.1;Parent=gene-PN289_04965;Dbxref=NCBI_GP:MDB8827998.1;Name=MDB8827998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008901351.1;locus_tag=PN289_04965;product=ABC transporter ATP-binding protein;protein_id=MDB8827998.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 14158 16068 . - . ID=gene-PN289_04970;Name=PN289_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04970 JAQMMZ010000008.1 Protein Homology CDS 14158 16068 . - 0 ID=cds-MDB8827999.1;Parent=gene-PN289_04970;Dbxref=NCBI_GP:MDB8827999.1;Name=MDB8827999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008901350.1;locus_tag=PN289_04970;product=ABC transporter ATP-binding protein;protein_id=MDB8827999.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 16120 16725 . - . ID=gene-PN289_04975;Name=PN289_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04975 JAQMMZ010000008.1 Protein Homology CDS 16120 16725 . - 0 ID=cds-MDB8828000.1;Parent=gene-PN289_04975;Dbxref=NCBI_GP:MDB8828000.1;Name=MDB8828000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008901349.1;locus_tag=PN289_04975;product=TetR/AcrR family transcriptional regulator;protein_id=MDB8828000.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 16955 17896 . - . ID=gene-PN289_04980;Name=PN289_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04980 JAQMMZ010000008.1 Protein Homology CDS 16955 17896 . - 0 ID=cds-MDB8828001.1;Parent=gene-PN289_04980;Dbxref=NCBI_GP:MDB8828001.1;Name=MDB8828001.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843857.1;locus_tag=PN289_04980;product=DDE-type integrase/transposase/recombinase;protein_id=MDB8828001.1;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 18158 18685 . + . ID=gene-PN289_04985;Name=PN289_04985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04985;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 18158 18685 . + 0 ID=cds-PN289_04985;Parent=gene-PN289_04985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=PN289_04985;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank gene 18642 19046 . + . ID=gene-PN289_04990;Name=PN289_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_04990 JAQMMZ010000008.1 Protein Homology CDS 18642 19046 . + 0 ID=cds-MDB8828002.1;Parent=gene-PN289_04990;Dbxref=NCBI_GP:MDB8828002.1;Name=MDB8828002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PN289_04990;product=helix-turn-helix domain-containing protein;protein_id=MDB8828002.1;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 19070 20023 . + . ID=gene-PN289_04995;Name=PN289_04995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_04995;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 19070 20023 . + 0 ID=cds-PN289_04995;Parent=gene-PN289_04995;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019161214.1;locus_tag=PN289_04995;product=IS3 family transposase;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank gene 20374 21243 . - . ID=gene-PN289_05000;Name=PN289_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05000 JAQMMZ010000008.1 Protein Homology CDS 20374 21243 . - 0 ID=cds-MDB8828003.1;Parent=gene-PN289_05000;Dbxref=NCBI_GP:MDB8828003.1;Name=MDB8828003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006000091.1;locus_tag=PN289_05000;product=ketopantoate reductase family protein;protein_id=MDB8828003.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 21344 21844 . - . ID=gene-PN289_05005;Name=PN289_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05005 JAQMMZ010000008.1 Protein Homology CDS 21344 21844 . - 0 ID=cds-MDB8828004.1;Parent=gene-PN289_05005;Dbxref=NCBI_GP:MDB8828004.1;Name=MDB8828004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008901979.1;locus_tag=PN289_05005;product=hypothetical protein;protein_id=MDB8828004.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 21860 22933 . + . ID=gene-PN289_05010;Name=PN289_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05010 JAQMMZ010000008.1 Protein Homology CDS 21860 22933 . + 0 ID=cds-MDB8828005.1;Parent=gene-PN289_05010;Dbxref=NCBI_GP:MDB8828005.1;Name=MDB8828005.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790652.1;locus_tag=PN289_05010;product=IS30 family transposase;protein_id=MDB8828005.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 23033 23710 . - . ID=gene-PN289_05015;Name=PN289_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05015 JAQMMZ010000008.1 Protein Homology CDS 23033 23710 . - 0 ID=cds-MDB8828006.1;Parent=gene-PN289_05015;Dbxref=NCBI_GP:MDB8828006.1;Name=MDB8828006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004804271.1;locus_tag=PN289_05015;product=class I SAM-dependent methyltransferase;protein_id=MDB8828006.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 23864 24193 . - . ID=gene-PN289_05020;Name=PN289_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05020 JAQMMZ010000008.1 Protein Homology CDS 23864 24193 . - 0 ID=cds-MDB8828007.1;Parent=gene-PN289_05020;Dbxref=NCBI_GP:MDB8828007.1;Name=MDB8828007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009537682.1;locus_tag=PN289_05020;product=23S rRNA methyltransferase;protein_id=MDB8828007.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 24260 24739 . - . ID=gene-PN289_05025;Name=PN289_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05025 JAQMMZ010000008.1 Protein Homology CDS 24260 24739 . - 0 ID=cds-MDB8828008.1;Parent=gene-PN289_05025;Dbxref=NCBI_GP:MDB8828008.1;Name=MDB8828008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005956877.1;locus_tag=PN289_05025;product=(2Fe-2S)-binding protein;protein_id=MDB8828008.1;transl_table=11 JAQMMZ010000008.1 Genbank pseudogene 25138 26072 . - . ID=gene-PN289_05030;Name=PN289_05030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_05030;pseudo=true JAQMMZ010000008.1 Protein Homology CDS 25138 26072 . - 0 ID=cds-PN289_05030;Parent=gene-PN289_05030;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611149.1;locus_tag=PN289_05030;product=IS3 family transposase;pseudo=true;transl_table=11 JAQMMZ010000008.1 Genbank gene 26445 28079 . - . ID=gene-PN289_05035;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PN289_05035 JAQMMZ010000008.1 Protein Homology CDS 26445 28079 . - 0 ID=cds-MDB8828009.1;Parent=gene-PN289_05035;Dbxref=NCBI_GP:MDB8828009.1;Name=MDB8828009.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790031.1;locus_tag=PN289_05035;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=MDB8828009.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 28654 30390 . - . ID=gene-PN289_05040;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PN289_05040 JAQMMZ010000008.1 Protein Homology CDS 28654 30390 . - 0 ID=cds-MDB8828010.1;Parent=gene-PN289_05040;Dbxref=NCBI_GP:MDB8828010.1;Name=MDB8828010.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845806.1;locus_tag=PN289_05040;product=pyruvate kinase;protein_id=MDB8828010.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 30472 31443 . - . ID=gene-PN289_05045;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PN289_05045 JAQMMZ010000008.1 Protein Homology CDS 30472 31443 . - 0 ID=cds-MDB8828011.1;Parent=gene-PN289_05045;Dbxref=NCBI_GP:MDB8828011.1;Name=MDB8828011.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416974.1;locus_tag=PN289_05045;product=6-phosphofructokinase;protein_id=MDB8828011.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 31795 35376 . - . ID=gene-PN289_05050;Name=PN289_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05050 JAQMMZ010000008.1 Protein Homology CDS 31795 35376 . - 0 ID=cds-MDB8828012.1;Parent=gene-PN289_05050;Dbxref=NCBI_GP:MDB8828012.1;Name=MDB8828012.1;Ontology_term=GO:0006260,GO:0008408;gbkey=CDS;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842608.1;locus_tag=PN289_05050;product=DNA polymerase III subunit alpha;protein_id=MDB8828012.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 35485 36450 . - . ID=gene-PN289_05055;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=PN289_05055 JAQMMZ010000008.1 Protein Homology CDS 35485 36450 . - 0 ID=cds-MDB8828013.1;Parent=gene-PN289_05055;Dbxref=NCBI_GP:MDB8828013.1;Name=MDB8828013.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842614.1;locus_tag=PN289_05055;product=DNA-binding protein WhiA;protein_id=MDB8828013.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 36455 36868 . - . ID=gene-PN289_05060;Name=PN289_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05060 JAQMMZ010000008.1 Protein Homology CDS 36455 36868 . - 0 ID=cds-MDB8828014.1;Parent=gene-PN289_05060;Dbxref=NCBI_GP:MDB8828014.1;Name=MDB8828014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842623.1;locus_tag=PN289_05060;product=NUDIX hydrolase;protein_id=MDB8828014.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 36900 38039 . - . ID=gene-PN289_05065;Name=PN289_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05065 JAQMMZ010000008.1 Protein Homology CDS 36900 38039 . - 0 ID=cds-MDB8828015.1;Parent=gene-PN289_05065;Dbxref=NCBI_GP:MDB8828015.1;Name=MDB8828015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842642.1;locus_tag=PN289_05065;product=YvcK family protein;protein_id=MDB8828015.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 38051 38935 . - . ID=gene-PN289_05070;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PN289_05070 JAQMMZ010000008.1 Protein Homology CDS 38051 38935 . - 0 ID=cds-MDB8828016.1;Parent=gene-PN289_05070;Dbxref=NCBI_GP:MDB8828016.1;Name=MDB8828016.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842610.1;locus_tag=PN289_05070;product=RNase adapter RapZ;protein_id=MDB8828016.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 38949 39686 . - . ID=gene-PN289_05075;Name=PN289_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05075 JAQMMZ010000008.1 Protein Homology CDS 38949 39686 . - 0 ID=cds-MDB8828017.1;Parent=gene-PN289_05075;Dbxref=NCBI_GP:MDB8828017.1;Name=MDB8828017.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842597.1;locus_tag=PN289_05075;product=PHP domain-containing protein;protein_id=MDB8828017.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 39703 40623 . - . ID=gene-PN289_05080;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PN289_05080 JAQMMZ010000008.1 Protein Homology CDS 39703 40623 . - 0 ID=cds-MDB8828018.1;Parent=gene-PN289_05080;Dbxref=NCBI_GP:MDB8828018.1;Name=MDB8828018.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842633.1;locus_tag=PN289_05080;product=UDP-N-acetylmuramate dehydrogenase;protein_id=MDB8828018.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 40715 41662 . - . ID=gene-PN289_05085;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=PN289_05085 JAQMMZ010000008.1 Protein Homology CDS 40715 41662 . - 0 ID=cds-MDB8828019.1;Parent=gene-PN289_05085;Dbxref=NCBI_GP:MDB8828019.1;Name=MDB8828019.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842638.1;locus_tag=PN289_05085;product=HPr(Ser) kinase/phosphatase;protein_id=MDB8828019.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 41655 43478 . - . ID=gene-PN289_05090;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PN289_05090 JAQMMZ010000008.1 Protein Homology CDS 41655 43478 . - 0 ID=cds-MDB8828020.1;Parent=gene-PN289_05090;Dbxref=NCBI_GP:MDB8828020.1;Name=MDB8828020.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845802.1;locus_tag=PN289_05090;product=excinuclease ABC subunit UvrC;protein_id=MDB8828020.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 43747 45015 . - . ID=gene-PN289_05095;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=PN289_05095 JAQMMZ010000008.1 Protein Homology CDS 43747 45015 . - 0 ID=cds-MDB8828021.1;Parent=gene-PN289_05095;Dbxref=NCBI_GP:MDB8828021.1;Name=MDB8828021.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843908.1;locus_tag=PN289_05095;product=serine/threonine transporter SstT;protein_id=MDB8828021.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 45295 48120 . - . ID=gene-PN289_05100;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PN289_05100 JAQMMZ010000008.1 Protein Homology CDS 45295 48120 . - 0 ID=cds-MDB8828022.1;Parent=gene-PN289_05100;Dbxref=NCBI_GP:MDB8828022.1;Name=MDB8828022.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843906.1;locus_tag=PN289_05100;product=excinuclease ABC subunit UvrA;protein_id=MDB8828022.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 48152 50131 . - . ID=gene-PN289_05105;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PN289_05105 JAQMMZ010000008.1 Protein Homology CDS 48152 50131 . - 0 ID=cds-MDB8828023.1;Parent=gene-PN289_05105;Dbxref=NCBI_GP:MDB8828023.1;Name=MDB8828023.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843903.1;locus_tag=PN289_05105;product=excinuclease ABC subunit UvrB;protein_id=MDB8828023.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 50243 50638 . - . ID=gene-PN289_05110;Name=PN289_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05110 JAQMMZ010000008.1 Protein Homology CDS 50243 50638 . - 0 ID=cds-MDB8828024.1;Parent=gene-PN289_05110;Dbxref=NCBI_GP:MDB8828024.1;Name=MDB8828024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843915.1;locus_tag=PN289_05110;product=hypothetical protein;protein_id=MDB8828024.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 50773 52047 . + . ID=gene-PN289_05115;Name=PN289_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05115 JAQMMZ010000008.1 Protein Homology CDS 50773 52047 . + 0 ID=cds-MDB8828025.1;Parent=gene-PN289_05115;Dbxref=NCBI_GP:MDB8828025.1;Name=MDB8828025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844929.1;locus_tag=PN289_05115;product=AI-2E family transporter;protein_id=MDB8828025.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 52177 52659 . - . ID=gene-PN289_05120;Name=PN289_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05120 JAQMMZ010000008.1 Protein Homology CDS 52177 52659 . - 0 ID=cds-MDB8828026.1;Parent=gene-PN289_05120;Dbxref=NCBI_GP:MDB8828026.1;Name=MDB8828026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844928.1;locus_tag=PN289_05120;product=hypothetical protein;protein_id=MDB8828026.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 52774 54270 . - . ID=gene-PN289_05125;Name=PN289_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05125 JAQMMZ010000008.1 Protein Homology CDS 52774 54270 . - 0 ID=cds-MDB8828027.1;Parent=gene-PN289_05125;Dbxref=NCBI_GP:MDB8828027.1;Name=MDB8828027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843930.1;locus_tag=PN289_05125;product=hypothetical protein;protein_id=MDB8828027.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 54438 54926 . - . ID=gene-PN289_05130;Name=PN289_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05130 JAQMMZ010000008.1 Protein Homology CDS 54438 54926 . - 0 ID=cds-MDB8828028.1;Parent=gene-PN289_05130;Dbxref=NCBI_GP:MDB8828028.1;Name=MDB8828028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844926.1;locus_tag=PN289_05130;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=MDB8828028.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 54968 56017 . - . ID=gene-PN289_05135;Name=PN289_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05135 JAQMMZ010000008.1 Protein Homology CDS 54968 56017 . - 0 ID=cds-MDB8828029.1;Parent=gene-PN289_05135;Dbxref=NCBI_GP:MDB8828029.1;Name=MDB8828029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843942.1;locus_tag=PN289_05135;product=type II secretion system F family protein;protein_id=MDB8828029.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 55986 57224 . - . ID=gene-PN289_05140;Name=PN289_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05140 JAQMMZ010000008.1 Protein Homology CDS 55986 57224 . - 0 ID=cds-MDB8828030.1;Parent=gene-PN289_05140;Dbxref=NCBI_GP:MDB8828030.1;Name=MDB8828030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843891.1;locus_tag=PN289_05140;product=GspE/PulE family protein;protein_id=MDB8828030.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 57470 58354 . - . ID=gene-PN289_05145;Name=PN289_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05145 JAQMMZ010000008.1 Protein Homology CDS 57470 58354 . - 0 ID=cds-MDB8828031.1;Parent=gene-PN289_05145;Dbxref=NCBI_GP:MDB8828031.1;Name=MDB8828031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843900.1;locus_tag=PN289_05145;product=DMT family transporter;protein_id=MDB8828031.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 58611 59795 . - . ID=gene-PN289_05150;Name=PN289_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05150 JAQMMZ010000008.1 Protein Homology CDS 58611 59795 . - 0 ID=cds-MDB8828032.1;Parent=gene-PN289_05150;Dbxref=NCBI_GP:MDB8828032.1;Name=MDB8828032.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843919.1;locus_tag=PN289_05150;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MDB8828032.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 59932 61257 . - . ID=gene-PN289_05155;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PN289_05155 JAQMMZ010000008.1 Protein Homology CDS 59932 61257 . - 0 ID=cds-MDB8828033.1;Parent=gene-PN289_05155;Dbxref=NCBI_GP:MDB8828033.1;Name=MDB8828033.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595547.1;locus_tag=PN289_05155;product=branched-chain amino acid transport system II carrier protein;protein_id=MDB8828033.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 61302 62294 . - . ID=gene-PN289_05160;Name=PN289_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05160 JAQMMZ010000008.1 Protein Homology CDS 61302 62294 . - 0 ID=cds-MDB8828034.1;Parent=gene-PN289_05160;Dbxref=NCBI_GP:MDB8828034.1;Name=MDB8828034.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007791224.1;locus_tag=PN289_05160;product=NAD(P)-dependent oxidoreductase;protein_id=MDB8828034.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 62625 63632 . - . ID=gene-PN289_05165;Name=PN289_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05165 JAQMMZ010000008.1 Protein Homology CDS 62625 63632 . - 0 ID=cds-MDB8828035.1;Parent=gene-PN289_05165;Dbxref=NCBI_GP:MDB8828035.1;Name=MDB8828035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843909.1;locus_tag=PN289_05165;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=MDB8828035.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 63689 64480 . - . ID=gene-PN289_05170;Name=PN289_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05170 JAQMMZ010000008.1 Protein Homology CDS 63689 64480 . - 0 ID=cds-MDB8828036.1;Parent=gene-PN289_05170;Dbxref=NCBI_GP:MDB8828036.1;Name=MDB8828036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007791160.1;locus_tag=PN289_05170;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=MDB8828036.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 64497 65630 . - . ID=gene-PN289_05175;Name=PN289_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05175 JAQMMZ010000008.1 Protein Homology CDS 64497 65630 . - 0 ID=cds-MDB8828037.1;Parent=gene-PN289_05175;Dbxref=NCBI_GP:MDB8828037.1;Name=MDB8828037.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101011.1;locus_tag=PN289_05175;product=acyl-CoA dehydrogenase family protein;protein_id=MDB8828037.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 65662 66780 . - . ID=gene-PN289_05180;Name=PN289_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05180 JAQMMZ010000008.1 Protein Homology CDS 65662 66780 . - 0 ID=cds-MDB8828038.1;Parent=gene-PN289_05180;Dbxref=NCBI_GP:MDB8828038.1;Name=MDB8828038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843926.1;locus_tag=PN289_05180;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=MDB8828038.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 66781 68016 . - . ID=gene-PN289_05185;Name=PN289_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05185 JAQMMZ010000008.1 Protein Homology CDS 66781 68016 . - 0 ID=cds-MDB8828039.1;Parent=gene-PN289_05185;Dbxref=NCBI_GP:MDB8828039.1;Name=MDB8828039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843897.1;locus_tag=PN289_05185;product=2-hydroxyacyl-CoA dehydratase;protein_id=MDB8828039.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 68031 68822 . - . ID=gene-PN289_05190;Name=PN289_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05190 JAQMMZ010000008.1 Protein Homology CDS 68031 68822 . - 0 ID=cds-MDB8828040.1;Parent=gene-PN289_05190;Dbxref=NCBI_GP:MDB8828040.1;Name=MDB8828040.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007788836.1;locus_tag=PN289_05190;product=acyl-CoA dehydratase activase;protein_id=MDB8828040.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 68862 70100 . - . ID=gene-PN289_05195;Name=PN289_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05195 JAQMMZ010000008.1 Protein Homology CDS 68862 70100 . - 0 ID=cds-MDB8828041.1;Parent=gene-PN289_05195;Dbxref=NCBI_GP:MDB8828041.1;Name=MDB8828041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843885.1;locus_tag=PN289_05195;product=CoA transferase;protein_id=MDB8828041.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 70154 71716 . - . ID=gene-PN289_05200;Name=PN289_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05200 JAQMMZ010000008.1 Protein Homology CDS 70154 71716 . - 0 ID=cds-MDB8828042.1;Parent=gene-PN289_05200;Dbxref=NCBI_GP:MDB8828042.1;Name=MDB8828042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595545.1;locus_tag=PN289_05200;product=AMP-binding protein;protein_id=MDB8828042.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 72025 72696 . - . ID=gene-PN289_05205;Name=PN289_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05205 JAQMMZ010000008.1 Protein Homology CDS 72025 72696 . - 0 ID=cds-MDB8828043.1;Parent=gene-PN289_05205;Dbxref=NCBI_GP:MDB8828043.1;Name=MDB8828043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843928.1;locus_tag=PN289_05205;product=GntR family transcriptional regulator;protein_id=MDB8828043.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 72855 73301 . - . ID=gene-PN289_05210;Name=PN289_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05210 JAQMMZ010000008.1 Protein Homology CDS 72855 73301 . - 0 ID=cds-MDB8828044.1;Parent=gene-PN289_05210;Dbxref=NCBI_GP:MDB8828044.1;Name=MDB8828044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843905.1;locus_tag=PN289_05210;product=hypothetical protein;protein_id=MDB8828044.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 73361 74743 . - . ID=gene-PN289_05215;Name=PN289_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05215 JAQMMZ010000008.1 Protein Homology CDS 73361 74743 . - 0 ID=cds-MDB8828045.1;Parent=gene-PN289_05215;Dbxref=NCBI_GP:MDB8828045.1;Name=MDB8828045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843890.1;locus_tag=PN289_05215;product=YjiH family protein;protein_id=MDB8828045.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 74945 75352 . + . ID=gene-PN289_05220;Name=PN289_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05220 JAQMMZ010000008.1 Protein Homology CDS 74945 75352 . + 0 ID=cds-MDB8828046.1;Parent=gene-PN289_05220;Dbxref=NCBI_GP:MDB8828046.1;Name=MDB8828046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843886.1;locus_tag=PN289_05220;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=MDB8828046.1;transl_table=11 JAQMMZ010000008.1 Genbank gene 75529 75780 . - . ID=gene-PN289_05225;Name=PN289_05225;end_range=75780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05225;partial=true JAQMMZ010000008.1 Protein Homology CDS 75529 75780 . - 0 ID=cds-MDB8828047.1;Parent=gene-PN289_05225;Dbxref=NCBI_GP:MDB8828047.1;Name=MDB8828047.1;end_range=75780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595544.1;locus_tag=PN289_05225;partial=true;product=transposase;protein_id=MDB8828047.1;transl_table=11 ##sequence-region JAQMMZ010000009.1 1 72294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261 JAQMMZ010000009.1 Genbank region 1 72294 . + . ID=JAQMMZ010000009.1:1..72294;Dbxref=taxon:1261;collection-date=2020-11-21;country=USA;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=F12_m1001271B151109d1_201121 JAQMMZ010000009.1 Genbank gene 292 1485 . - . ID=gene-PN289_05230;Name=PN289_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05230 JAQMMZ010000009.1 Protein Homology CDS 292 1485 . - 0 ID=cds-MDB8828048.1;Parent=gene-PN289_05230;Dbxref=NCBI_GP:MDB8828048.1;Name=MDB8828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790779.1;locus_tag=PN289_05230;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MDB8828048.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 1767 2066 . + . ID=gene-PN289_05235;Name=PN289_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05235 JAQMMZ010000009.1 Protein Homology CDS 1767 2066 . + 0 ID=cds-MDB8828049.1;Parent=gene-PN289_05235;Dbxref=NCBI_GP:MDB8828049.1;Name=MDB8828049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=PN289_05235;product=helix-turn-helix domain-containing protein;protein_id=MDB8828049.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 2824 3138 . + . ID=gene-PN289_05240;Name=PN289_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05240 JAQMMZ010000009.1 Protein Homology CDS 2824 3138 . + 0 ID=cds-MDB8828050.1;Parent=gene-PN289_05240;Dbxref=NCBI_GP:MDB8828050.1;Name=MDB8828050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148869.1;locus_tag=PN289_05240;product=YdcP family protein;protein_id=MDB8828050.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 3157 3540 . + . ID=gene-PN289_05245;Name=PN289_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05245 JAQMMZ010000009.1 Protein Homology CDS 3157 3540 . + 0 ID=cds-MDB8828051.1;Parent=gene-PN289_05245;Dbxref=NCBI_GP:MDB8828051.1;Name=MDB8828051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234286.1;locus_tag=PN289_05245;product=YdcP family protein;protein_id=MDB8828051.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 3569 4954 . + . ID=gene-PN289_05250;Name=PN289_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05250 JAQMMZ010000009.1 Protein Homology CDS 3569 4954 . + 0 ID=cds-MDB8828052.1;Parent=gene-PN289_05250;Dbxref=NCBI_GP:MDB8828052.1;Name=MDB8828052.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813487.1;locus_tag=PN289_05250;product=FtsK/SpoIIIE domain-containing protein;protein_id=MDB8828052.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 4957 5109 . + . ID=gene-PN289_05255;Name=PN289_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05255 JAQMMZ010000009.1 Protein Homology CDS 4957 5109 . + 0 ID=cds-MDB8828053.1;Parent=gene-PN289_05255;Dbxref=NCBI_GP:MDB8828053.1;Name=MDB8828053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000879507.1;locus_tag=PN289_05255;product=conjugal transfer protein;protein_id=MDB8828053.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 5132 6337 . + . ID=gene-PN289_05260;Name=PN289_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05260 JAQMMZ010000009.1 Protein Homology CDS 5132 6337 . + 0 ID=cds-MDB8828054.1;Parent=gene-PN289_05260;Dbxref=NCBI_GP:MDB8828054.1;Name=MDB8828054.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398284.1;locus_tag=PN289_05260;product=replication initiation factor domain-containing protein;protein_id=MDB8828054.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 6380 6601 . + . ID=gene-PN289_05265;Name=PN289_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05265 JAQMMZ010000009.1 Protein Homology CDS 6380 6601 . + 0 ID=cds-MDB8828055.1;Parent=gene-PN289_05265;Dbxref=NCBI_GP:MDB8828055.1;Name=MDB8828055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002570387.1;locus_tag=PN289_05265;product=hypothetical protein;protein_id=MDB8828055.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 6718 7215 . + . ID=gene-PN289_05270;Name=PN289_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05270 JAQMMZ010000009.1 Protein Homology CDS 6718 7215 . + 0 ID=cds-MDB8828056.1;Parent=gene-PN289_05270;Dbxref=NCBI_GP:MDB8828056.1;Name=MDB8828056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342537.1;locus_tag=PN289_05270;product=antirestriction protein ArdA;protein_id=MDB8828056.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 7304 7696 . + . ID=gene-PN289_05275;Name=PN289_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05275 JAQMMZ010000009.1 Protein Homology CDS 7304 7696 . + 0 ID=cds-MDB8828057.1;Parent=gene-PN289_05275;Dbxref=NCBI_GP:MDB8828057.1;Name=MDB8828057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345009.1;locus_tag=PN289_05275;product=conjugal transfer protein;protein_id=MDB8828057.1;transl_table=11 JAQMMZ010000009.1 Genbank pseudogene 7680 10004 . + . ID=gene-PN289_05280;Name=PN289_05280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_05280;pseudo=true JAQMMZ010000009.1 Protein Homology CDS 7680 10004 . + 0 ID=cds-PN289_05280;Parent=gene-PN289_05280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331151.1;locus_tag=PN289_05280;product=ATP-binding protein;pseudo=true;transl_table=11 JAQMMZ010000009.1 Genbank gene 10132 10812 . + . ID=gene-PN289_05285;Name=PN289_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05285 JAQMMZ010000009.1 Protein Homology CDS 10132 10812 . + 0 ID=cds-MDB8828058.1;Parent=gene-PN289_05285;Dbxref=NCBI_GP:MDB8828058.1;Name=MDB8828058.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611709.1;locus_tag=PN289_05285;product=IS6-like element ISEnfa1 family transposase;protein_id=MDB8828058.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 11009 11839 . - . ID=gene-PN289_05290;Name=PN289_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05290 JAQMMZ010000009.1 Protein Homology CDS 11009 11839 . - 0 ID=cds-MDB8828059.1;Parent=gene-PN289_05290;Dbxref=NCBI_GP:MDB8828059.1;Name=MDB8828059.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368564.1;locus_tag=PN289_05290;product=undecaprenyl-diphosphate phosphatase;protein_id=MDB8828059.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 11839 12588 . - . ID=gene-PN289_05295;Name=PN289_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05295 JAQMMZ010000009.1 Protein Homology CDS 11839 12588 . - 0 ID=cds-MDB8828060.1;Parent=gene-PN289_05295;Dbxref=NCBI_GP:MDB8828060.1;Name=MDB8828060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933358.1;locus_tag=PN289_05295;product=ABC transporter permease;protein_id=MDB8828060.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 12581 13498 . - . ID=gene-PN289_05300;Name=PN289_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05300 JAQMMZ010000009.1 Protein Homology CDS 12581 13498 . - 0 ID=cds-MDB8828061.1;Parent=gene-PN289_05300;Dbxref=NCBI_GP:MDB8828061.1;Name=MDB8828061.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368562.1;locus_tag=PN289_05300;product=ATP-binding cassette domain-containing protein;protein_id=MDB8828061.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 13681 14295 . - . ID=gene-PN289_05305;Name=PN289_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05305 JAQMMZ010000009.1 Protein Homology CDS 13681 14295 . - 0 ID=cds-MDB8828062.1;Parent=gene-PN289_05305;Dbxref=NCBI_GP:MDB8828062.1;Name=MDB8828062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016897369.1;locus_tag=PN289_05305;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828062.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 14285 14611 . - . ID=gene-PN289_05310;Name=PN289_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05310 JAQMMZ010000009.1 Protein Homology CDS 14285 14611 . - 0 ID=cds-MDB8828063.1;Parent=gene-PN289_05310;Dbxref=NCBI_GP:MDB8828063.1;Name=MDB8828063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387760.1;locus_tag=PN289_05310;product=DNA-binding protein;protein_id=MDB8828063.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 14648 14812 . + . ID=gene-PN289_05315;Name=PN289_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05315 JAQMMZ010000009.1 Protein Homology CDS 14648 14812 . + 0 ID=cds-MDB8828064.1;Parent=gene-PN289_05315;Dbxref=NCBI_GP:MDB8828064.1;Name=MDB8828064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=PN289_05315;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828064.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 14851 15531 . + . ID=gene-PN289_05320;Name=PN289_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05320 JAQMMZ010000009.1 Protein Homology CDS 14851 15531 . + 0 ID=cds-MDB8828065.1;Parent=gene-PN289_05320;Dbxref=NCBI_GP:MDB8828065.1;Name=MDB8828065.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611709.1;locus_tag=PN289_05320;product=IS6-like element ISEnfa1 family transposase;protein_id=MDB8828065.1;transl_table=11 JAQMMZ010000009.1 Genbank pseudogene 15586 16248 . + . ID=gene-PN289_05325;Name=PN289_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PN289_05325;pseudo=true JAQMMZ010000009.1 Protein Homology CDS 15586 16248 . + 0 ID=cds-PN289_05325;Parent=gene-PN289_05325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331151.1;locus_tag=PN289_05325;product=ATP-binding protein;pseudo=true;transl_table=11 JAQMMZ010000009.1 Genbank gene 16251 18428 . + . ID=gene-PN289_05330;Name=PN289_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05330 JAQMMZ010000009.1 Protein Homology CDS 16251 18428 . + 0 ID=cds-MDB8828066.1;Parent=gene-PN289_05330;Dbxref=NCBI_GP:MDB8828066.1;Name=MDB8828066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646277.1;locus_tag=PN289_05330;product=YtxH domain-containing protein;protein_id=MDB8828066.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 18425 19426 . + . ID=gene-PN289_05335;Name=PN289_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05335 JAQMMZ010000009.1 Protein Homology CDS 18425 19426 . + 0 ID=cds-MDB8828067.1;Parent=gene-PN289_05335;Dbxref=NCBI_GP:MDB8828067.1;Name=MDB8828067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368130.1;locus_tag=PN289_05335;product=bifunctional lysozyme/C40 family peptidase;protein_id=MDB8828067.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 19423 20355 . + . ID=gene-PN289_05340;Name=PN289_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05340 JAQMMZ010000009.1 Protein Homology CDS 19423 20355 . + 0 ID=cds-MDB8828068.1;Parent=gene-PN289_05340;Dbxref=NCBI_GP:MDB8828068.1;Name=MDB8828068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002989471.1;locus_tag=PN289_05340;product=conjugal transfer protein;protein_id=MDB8828068.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 20600 20716 . + . ID=gene-PN289_05345;Name=PN289_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05345 JAQMMZ010000009.1 Protein Homology CDS 20600 20716 . + 0 ID=cds-MDB8828069.1;Parent=gene-PN289_05345;Dbxref=NCBI_GP:MDB8828069.1;Name=MDB8828069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001814923.1;locus_tag=PN289_05345;product=tetracycline resistance determinant leader peptide;protein_id=MDB8828069.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 20732 22651 . + . ID=gene-PN289_05350;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=PN289_05350 JAQMMZ010000009.1 Protein Homology CDS 20732 22651 . + 0 ID=cds-MDB8828070.1;Parent=gene-PN289_05350;Dbxref=NCBI_GP:MDB8828070.1;Name=MDB8828070.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=PN289_05350;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=MDB8828070.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 22770 22937 . + . ID=gene-PN289_05355;Name=PN289_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05355 JAQMMZ010000009.1 Protein Homology CDS 22770 22937 . + 0 ID=cds-MDB8828071.1;Parent=gene-PN289_05355;Dbxref=NCBI_GP:MDB8828071.1;Name=MDB8828071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319681.1;locus_tag=PN289_05355;product=cysteine-rich KTR domain-containing protein;protein_id=MDB8828071.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 22997 23350 . - . ID=gene-PN289_05360;Name=PN289_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05360 JAQMMZ010000009.1 Protein Homology CDS 22997 23350 . - 0 ID=cds-MDB8828072.1;Parent=gene-PN289_05360;Dbxref=NCBI_GP:MDB8828072.1;Name=MDB8828072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227347.1;locus_tag=PN289_05360;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828072.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 23855 24277 . + . ID=gene-PN289_05365;Name=PN289_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05365 JAQMMZ010000009.1 Protein Homology CDS 23855 24277 . + 0 ID=cds-MDB8828073.1;Parent=gene-PN289_05365;Dbxref=NCBI_GP:MDB8828073.1;Name=MDB8828073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006733729.1;locus_tag=PN289_05365;product=sigma-70 family RNA polymerase sigma factor;protein_id=MDB8828073.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 24274 24504 . + . ID=gene-PN289_05370;Name=PN289_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05370 JAQMMZ010000009.1 Protein Homology CDS 24274 24504 . + 0 ID=cds-MDB8828074.1;Parent=gene-PN289_05370;Dbxref=NCBI_GP:MDB8828074.1;Name=MDB8828074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002411750.1;locus_tag=PN289_05370;product=helix-turn-helix domain-containing protein;protein_id=MDB8828074.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 24730 24981 . - . ID=gene-PN289_05375;Name=PN289_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05375 JAQMMZ010000009.1 Protein Homology CDS 24730 24981 . - 0 ID=cds-MDB8828075.1;Parent=gene-PN289_05375;Dbxref=NCBI_GP:MDB8828075.1;Name=MDB8828075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845478.1;locus_tag=PN289_05375;product=hypothetical protein;protein_id=MDB8828075.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 24965 25168 . + . ID=gene-PN289_05380;Name=PN289_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05380 JAQMMZ010000009.1 Protein Homology CDS 24965 25168 . + 0 ID=cds-MDB8828076.1;Parent=gene-PN289_05380;Dbxref=NCBI_GP:MDB8828076.1;Name=MDB8828076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006730246.1;locus_tag=PN289_05380;product=excisionase;protein_id=MDB8828076.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 25250 26467 . + . ID=gene-PN289_05385;Name=PN289_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05385 JAQMMZ010000009.1 Protein Homology CDS 25250 26467 . + 0 ID=cds-MDB8828077.1;Parent=gene-PN289_05385;Dbxref=NCBI_GP:MDB8828077.1;Name=MDB8828077.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220015.1;locus_tag=PN289_05385;product=tyrosine-type recombinase/integrase;protein_id=MDB8828077.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 26829 27386 . - . ID=gene-PN289_05390;Name=PN289_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05390 JAQMMZ010000009.1 Protein Homology CDS 26829 27386 . - 0 ID=cds-MDB8828078.1;Parent=gene-PN289_05390;Dbxref=NCBI_GP:MDB8828078.1;Name=MDB8828078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843235.1;locus_tag=PN289_05390;product=hypothetical protein;protein_id=MDB8828078.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 27865 28083 . - . ID=gene-PN289_05395;Name=PN289_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05395 JAQMMZ010000009.1 Protein Homology CDS 27865 28083 . - 0 ID=cds-MDB8828079.1;Parent=gene-PN289_05395;Dbxref=NCBI_GP:MDB8828079.1;Name=MDB8828079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843172.1;locus_tag=PN289_05395;product=helix-turn-helix transcriptional regulator;protein_id=MDB8828079.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 29257 30141 . + . ID=gene-PN289_05400;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PN289_05400 JAQMMZ010000009.1 Protein Homology CDS 29257 30141 . + 0 ID=cds-MDB8828080.1;Parent=gene-PN289_05400;Dbxref=NCBI_GP:MDB8828080.1;Name=MDB8828080.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843189.1;locus_tag=PN289_05400;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=MDB8828080.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 30231 30449 . - . ID=gene-PN289_05405;Name=PN289_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05405 JAQMMZ010000009.1 Protein Homology CDS 30231 30449 . - 0 ID=cds-MDB8828081.1;Parent=gene-PN289_05405;Dbxref=NCBI_GP:MDB8828081.1;Name=MDB8828081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843301.1;locus_tag=PN289_05405;product=hypothetical protein;protein_id=MDB8828081.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 30676 31221 . + . ID=gene-PN289_05410;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PN289_05410 JAQMMZ010000009.1 Protein Homology CDS 30676 31221 . + 0 ID=cds-MDB8828082.1;Parent=gene-PN289_05410;Dbxref=NCBI_GP:MDB8828082.1;Name=MDB8828082.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843192.1;locus_tag=PN289_05410;product=hypoxanthine phosphoribosyltransferase;protein_id=MDB8828082.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 31363 31986 . - . ID=gene-PN289_05415;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PN289_05415 JAQMMZ010000009.1 Protein Homology CDS 31363 31986 . - 0 ID=cds-MDB8828083.1;Parent=gene-PN289_05415;Dbxref=NCBI_GP:MDB8828083.1;Name=MDB8828083.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891775.1;locus_tag=PN289_05415;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=MDB8828083.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 32152 34524 . - . ID=gene-PN289_05420;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PN289_05420 JAQMMZ010000009.1 Protein Homology CDS 32152 34524 . - 0 ID=cds-MDB8828084.1;Parent=gene-PN289_05420;Dbxref=NCBI_GP:MDB8828084.1;Name=MDB8828084.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845050.1;locus_tag=PN289_05420;product=endopeptidase La;protein_id=MDB8828084.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 34768 36036 . - . ID=gene-PN289_05425;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PN289_05425 JAQMMZ010000009.1 Protein Homology CDS 34768 36036 . - 0 ID=cds-MDB8828085.1;Parent=gene-PN289_05425;Dbxref=NCBI_GP:MDB8828085.1;Name=MDB8828085.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843242.1;locus_tag=PN289_05425;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=MDB8828085.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 36061 36645 . - . ID=gene-PN289_05430;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PN289_05430 JAQMMZ010000009.1 Protein Homology CDS 36061 36645 . - 0 ID=cds-MDB8828086.1;Parent=gene-PN289_05430;Dbxref=NCBI_GP:MDB8828086.1;Name=MDB8828086.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843239.1;locus_tag=PN289_05430;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=MDB8828086.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 36844 38127 . - . ID=gene-PN289_05435;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PN289_05435 JAQMMZ010000009.1 Protein Homology CDS 36844 38127 . - 0 ID=cds-MDB8828087.1;Parent=gene-PN289_05435;Dbxref=NCBI_GP:MDB8828087.1;Name=MDB8828087.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845052.1;locus_tag=PN289_05435;product=trigger factor;protein_id=MDB8828087.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 38239 38715 . - . ID=gene-PN289_05440;Name=PN289_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05440 JAQMMZ010000009.1 Protein Homology CDS 38239 38715 . - 0 ID=cds-MDB8828088.1;Parent=gene-PN289_05440;Dbxref=NCBI_GP:MDB8828088.1;Name=MDB8828088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843291.1;locus_tag=PN289_05440;product=metallophosphoesterase;protein_id=MDB8828088.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 38861 40288 . - . ID=gene-PN289_05445;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PN289_05445 JAQMMZ010000009.1 Protein Homology CDS 38861 40288 . - 0 ID=cds-MDB8828089.1;Parent=gene-PN289_05445;Dbxref=NCBI_GP:MDB8828089.1;Name=MDB8828089.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845054.1;locus_tag=PN289_05445;product=ribonuclease PH;protein_id=MDB8828089.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 40394 42496 . - . ID=gene-PN289_05450;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PN289_05450 JAQMMZ010000009.1 Protein Homology CDS 40394 42496 . - 0 ID=cds-MDB8828090.1;Parent=gene-PN289_05450;Dbxref=NCBI_GP:MDB8828090.1;Name=MDB8828090.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845056.1;locus_tag=PN289_05450;product=NAD-dependent DNA ligase LigA;protein_id=MDB8828090.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 42498 42983 . - . ID=gene-PN289_05455;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PN289_05455 JAQMMZ010000009.1 Protein Homology CDS 42498 42983 . - 0 ID=cds-MDB8828091.1;Parent=gene-PN289_05455;Dbxref=NCBI_GP:MDB8828091.1;Name=MDB8828091.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845058.1;locus_tag=PN289_05455;product=thioredoxin-dependent thiol peroxidase;protein_id=MDB8828091.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 43131 43400 . - . ID=gene-PN289_05460;Name=PN289_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05460 JAQMMZ010000009.1 Protein Homology CDS 43131 43400 . - 0 ID=cds-MDB8828092.1;Parent=gene-PN289_05460;Dbxref=NCBI_GP:MDB8828092.1;Name=MDB8828092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843178.1;locus_tag=PN289_05460;product=hypothetical protein;protein_id=MDB8828092.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 43416 44141 . - . ID=gene-PN289_05465;Name=PN289_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05465 JAQMMZ010000009.1 Protein Homology CDS 43416 44141 . - 0 ID=cds-MDB8828093.1;Parent=gene-PN289_05465;Dbxref=NCBI_GP:MDB8828093.1;Name=MDB8828093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843289.1;locus_tag=PN289_05465;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=MDB8828093.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 44324 45082 . - . ID=gene-PN289_05470;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PN289_05470 JAQMMZ010000009.1 Protein Homology CDS 44324 45082 . - 0 ID=cds-MDB8828094.1;Parent=gene-PN289_05470;Dbxref=NCBI_GP:MDB8828094.1;Name=MDB8828094.1;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843231.1;locus_tag=PN289_05470;product=NAD(+) synthase;protein_id=MDB8828094.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 45203 45847 . - . ID=gene-PN289_05475;Name=PN289_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05475 JAQMMZ010000009.1 Protein Homology CDS 45203 45847 . - 0 ID=cds-MDB8828095.1;Parent=gene-PN289_05475;Dbxref=NCBI_GP:MDB8828095.1;Name=MDB8828095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843222.1;locus_tag=PN289_05475;product=YigZ family protein;protein_id=MDB8828095.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 46084 46506 . - . ID=gene-PN289_05480;Name=PN289_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05480 JAQMMZ010000009.1 Protein Homology CDS 46084 46506 . - 0 ID=cds-MDB8828096.1;Parent=gene-PN289_05480;Dbxref=NCBI_GP:MDB8828096.1;Name=MDB8828096.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595231.1;locus_tag=PN289_05480;product=NUDIX domain-containing protein;protein_id=MDB8828096.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 46564 47241 . - . ID=gene-PN289_05485;Name=PN289_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05485 JAQMMZ010000009.1 Protein Homology CDS 46564 47241 . - 0 ID=cds-MDB8828097.1;Parent=gene-PN289_05485;Dbxref=NCBI_GP:MDB8828097.1;Name=MDB8828097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845066.1;locus_tag=PN289_05485;product=HEAT repeat domain-containing protein;protein_id=MDB8828097.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 47359 47490 . - . ID=gene-PN289_05490;Name=PN289_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05490 JAQMMZ010000009.1 GeneMarkS-2+ CDS 47359 47490 . - 0 ID=cds-MDB8828098.1;Parent=gene-PN289_05490;Dbxref=NCBI_GP:MDB8828098.1;Name=MDB8828098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PN289_05490;product=hypothetical protein;protein_id=MDB8828098.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 47625 48230 . - . ID=gene-PN289_05495;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PN289_05495 JAQMMZ010000009.1 Protein Homology CDS 47625 48230 . - 0 ID=cds-MDB8828099.1;Parent=gene-PN289_05495;Dbxref=NCBI_GP:MDB8828099.1;Name=MDB8828099.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843206.1;locus_tag=PN289_05495;product=30S ribosomal protein S4;protein_id=MDB8828099.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 48493 48963 . - . ID=gene-PN289_05500;Name=PN289_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05500 JAQMMZ010000009.1 Protein Homology CDS 48493 48963 . - 0 ID=cds-MDB8828100.1;Parent=gene-PN289_05500;Dbxref=NCBI_GP:MDB8828100.1;Name=MDB8828100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845068.1;locus_tag=PN289_05500;product=YbaK/EbsC family protein;protein_id=MDB8828100.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 48992 50698 . - . ID=gene-PN289_05505;Name=PN289_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05505 JAQMMZ010000009.1 Protein Homology CDS 48992 50698 . - 0 ID=cds-MDB8828101.1;Parent=gene-PN289_05505;Dbxref=NCBI_GP:MDB8828101.1;Name=MDB8828101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843237.1;locus_tag=PN289_05505;product=phospholipase D-like domain-containing protein;protein_id=MDB8828101.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 50703 50963 . - . ID=gene-PN289_05510;Name=PN289_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05510 JAQMMZ010000009.1 Protein Homology CDS 50703 50963 . - 0 ID=cds-MDB8828102.1;Parent=gene-PN289_05510;Dbxref=NCBI_GP:MDB8828102.1;Name=MDB8828102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006440721.1;locus_tag=PN289_05510;product=cysteine-rich small domain-containing protein;protein_id=MDB8828102.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 51135 52448 . + . ID=gene-PN289_05515;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PN289_05515 JAQMMZ010000009.1 Protein Homology CDS 51135 52448 . + 0 ID=cds-MDB8828103.1;Parent=gene-PN289_05515;Dbxref=NCBI_GP:MDB8828103.1;Name=MDB8828103.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845071.1;locus_tag=PN289_05515;product=GTPase HflX;protein_id=MDB8828103.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 52462 53754 . + . ID=gene-PN289_05520;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PN289_05520 JAQMMZ010000009.1 Protein Homology CDS 52462 53754 . + 0 ID=cds-MDB8828104.1;Parent=gene-PN289_05520;Dbxref=NCBI_GP:MDB8828104.1;Name=MDB8828104.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843297.1;locus_tag=PN289_05520;product=GTPase HflX;protein_id=MDB8828104.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 53860 54468 . - . ID=gene-PN289_05525;Name=PN289_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05525 JAQMMZ010000009.1 Protein Homology CDS 53860 54468 . - 0 ID=cds-MDB8828105.1;Parent=gene-PN289_05525;Dbxref=NCBI_GP:MDB8828105.1;Name=MDB8828105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843226.1;locus_tag=PN289_05525;product=Maf family protein;protein_id=MDB8828105.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 54470 55741 . - . ID=gene-PN289_05530;Name=PN289_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05530 JAQMMZ010000009.1 Protein Homology CDS 54470 55741 . - 0 ID=cds-MDB8828106.1;Parent=gene-PN289_05530;Dbxref=NCBI_GP:MDB8828106.1;Name=MDB8828106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019595234.1;locus_tag=PN289_05530;product=D-alanyl-D-alanine carboxypeptidase;protein_id=MDB8828106.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 56049 56570 . + . ID=gene-PN289_05535;Name=PN289_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05535 JAQMMZ010000009.1 Protein Homology CDS 56049 56570 . + 0 ID=cds-MDB8828107.1;Parent=gene-PN289_05535;Dbxref=NCBI_GP:MDB8828107.1;Name=MDB8828107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843179.1;locus_tag=PN289_05535;product=DUF4364 family protein;protein_id=MDB8828107.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 56658 57272 . - . ID=gene-PN289_05540;Name=PN289_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05540 JAQMMZ010000009.1 Protein Homology CDS 56658 57272 . - 0 ID=cds-MDB8828108.1;Parent=gene-PN289_05540;Dbxref=NCBI_GP:MDB8828108.1;Name=MDB8828108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845078.1;locus_tag=PN289_05540;product=hypothetical protein;protein_id=MDB8828108.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 57506 59152 . - . ID=gene-PN289_05545;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PN289_05545 JAQMMZ010000009.1 Protein Homology CDS 57506 59152 . - 0 ID=cds-MDB8828109.1;Parent=gene-PN289_05545;Dbxref=NCBI_GP:MDB8828109.1;Name=MDB8828109.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843280.1;locus_tag=PN289_05545;product=hydroxylamine reductase;protein_id=MDB8828109.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 59299 59898 . - . ID=gene-PN289_05550;Name=PN289_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05550 JAQMMZ010000009.1 Protein Homology CDS 59299 59898 . - 0 ID=cds-MDB8828110.1;Parent=gene-PN289_05550;Dbxref=NCBI_GP:MDB8828110.1;Name=MDB8828110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843265.1;locus_tag=PN289_05550;product=response regulator transcription factor;protein_id=MDB8828110.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 59898 60677 . - . ID=gene-PN289_05555;Name=PN289_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05555 JAQMMZ010000009.1 Protein Homology CDS 59898 60677 . - 0 ID=cds-MDB8828111.1;Parent=gene-PN289_05555;Dbxref=NCBI_GP:MDB8828111.1;Name=MDB8828111.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.2;locus_tag=PN289_05555;product=histidine kinase;protein_id=MDB8828111.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 60984 61715 . - . ID=gene-PN289_05560;Name=PN289_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05560 JAQMMZ010000009.1 Protein Homology CDS 60984 61715 . - 0 ID=cds-MDB8828112.1;Parent=gene-PN289_05560;Dbxref=NCBI_GP:MDB8828112.1;Name=MDB8828112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843220.1;locus_tag=PN289_05560;product=ABC transporter permease;protein_id=MDB8828112.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 61718 62590 . - . ID=gene-PN289_05565;Name=PN289_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05565 JAQMMZ010000009.1 Protein Homology CDS 61718 62590 . - 0 ID=cds-MDB8828113.1;Parent=gene-PN289_05565;Dbxref=NCBI_GP:MDB8828113.1;Name=MDB8828113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843174.1;locus_tag=PN289_05565;product=ABC transporter ATP-binding protein;protein_id=MDB8828113.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 62826 64238 . - . ID=gene-PN289_05570;Name=PN289_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05570 JAQMMZ010000009.1 Protein Homology CDS 62826 64238 . - 0 ID=cds-MDB8828114.1;Parent=gene-PN289_05570;Dbxref=NCBI_GP:MDB8828114.1;Name=MDB8828114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843176.1;locus_tag=PN289_05570;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MDB8828114.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 64389 65819 . - . ID=gene-PN289_05575;Name=PN289_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05575 JAQMMZ010000009.1 Protein Homology CDS 64389 65819 . - 0 ID=cds-MDB8828115.1;Parent=gene-PN289_05575;Dbxref=NCBI_GP:MDB8828115.1;Name=MDB8828115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843184.1;locus_tag=PN289_05575;product=aminoacyl-histidine dipeptidase;protein_id=MDB8828115.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 65970 66596 . - . ID=gene-PN289_05580;Name=PN289_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05580 JAQMMZ010000009.1 Protein Homology CDS 65970 66596 . - 0 ID=cds-MDB8828116.1;Parent=gene-PN289_05580;Dbxref=NCBI_GP:MDB8828116.1;Name=MDB8828116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843254.1;locus_tag=PN289_05580;product=GntR family transcriptional regulator;protein_id=MDB8828116.1;transl_table=11 JAQMMZ010000009.1 Genbank gene 66854 69505 . - . ID=gene-PN289_05585;Name=PN289_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05585 JAQMMZ010000009.1 Protein Homology CDS 66854 69505 . - 0 ID=cds-MDB8828117.1;Parent=gene-PN289_05585;Dbxref=NCBI_GP:MDB8828117.1;Name=MDB8828117.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011861890.1;locus_tag=PN289_05585;product=valine--tRNA ligase;protein_id=MDB8828117.1;transl_table=11 JAQMMZ010000009.1 cmsearch binding_site 69573 69862 . - . ID=id-JAQMMZ010000009.1:69573..69862;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 JAQMMZ010000009.1 Genbank gene 70401 71948 . + . ID=gene-PN289_05590;Name=PN289_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PN289_05590 JAQMMZ010000009.1 Protein Homology CDS 70401 71948 . + 0 ID=cds-MDB8828118.1;Parent=gene-PN289_05590;Dbxref=NCBI_GP:MDB8828118.1;Name=MDB8828118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843191.1;locus_tag=PN289_05590;product=4Fe-4S dicluster domain-containing protein;protein_id=MDB8828118.1;transl_table=11 ###