##gff-version 3 #!gff-spec-version 1.20 #!processor NCBI annotwriter ##sequence-region NC_013438.1 1 31045 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=668336 NC_013438.1 RefSeq region 1 31045 . + . ID=id0;Dbxref=taxon:668336;Is_circular=true;gbkey=Src;genome=plasmid;mol_type=genomic DNA;old-name=Aggregatibacter actinomycetemcomitans;plasmid-name=S25;strain=D11S-1 NC_013438.1 RefSeq gene 21 437 . + . ID=gene0;Name=D11S_2274;Dbxref=GeneID:8537998;gbkey=Gene;locus_tag=D11S_2274 NC_013438.1 RefSeq CDS 21 437 . + 0 ID=cds0;Name=YP_003264481.1;Parent=gene0;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264481.1,GeneID:8537998;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264481.1;transl_table=11 NC_013438.1 RefSeq gene 431 568 . + . ID=gene1;Name=D11S_2275;Dbxref=GeneID:8537956;gbkey=Gene;locus_tag=D11S_2275 NC_013438.1 RefSeq CDS 431 568 . + 0 ID=cds1;Name=YP_003264482.1;Parent=gene1;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264482.1,GeneID:8537956;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264482.1;transl_table=11 NC_013438.1 RefSeq gene 652 819 . + . ID=gene2;Name=D11S_2276;Dbxref=GeneID:8537957;gbkey=Gene;locus_tag=D11S_2276 NC_013438.1 RefSeq CDS 652 819 . + 0 ID=cds2;Name=YP_003264483.1;Parent=gene2;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264483.1,GeneID:8537957;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264483.1;transl_table=11 NC_013438.1 RefSeq gene 1029 1154 . - . ID=gene3;Name=D11S_2277;Dbxref=GeneID:8537958;gbkey=Gene;locus_tag=D11S_2277 NC_013438.1 RefSeq CDS 1029 1154 . - 0 ID=cds3;Name=YP_003264484.1;Parent=gene3;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264484.1,GeneID:8537958;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264484.1;transl_table=11 NC_013438.1 RefSeq gene 1554 2531 . + . ID=gene4;Name=D11S_2278;Dbxref=GeneID:8537959;gbkey=Gene;locus_tag=D11S_2278 NC_013438.1 RefSeq CDS 1554 2531 . + 0 ID=cds4;Name=YP_003264485.1;Parent=gene4;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264485.1,GeneID:8537959;gbkey=CDS;product=replication initiator protein;protein_id=YP_003264485.1;transl_table=11 NC_013438.1 RefSeq gene 2714 2902 . + . ID=gene5;Name=D11S_2279;Dbxref=GeneID:8537960;gbkey=Gene;locus_tag=D11S_2279 NC_013438.1 RefSeq CDS 2714 2902 . + 0 ID=cds5;Name=YP_003264486.1;Parent=gene5;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264486.1,GeneID:8537960;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264486.1;transl_table=11 NC_013438.1 RefSeq gene 2902 3564 . + . ID=gene6;Name=D11S_2280;Dbxref=GeneID:8537961;gbkey=Gene;locus_tag=D11S_2280 NC_013438.1 RefSeq CDS 2902 3564 . + 0 ID=cds6;Name=YP_003264487.1;Parent=gene6;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264487.1,GeneID:8537961;gbkey=CDS;product=VirB1;protein_id=YP_003264487.1;transl_table=11 NC_013438.1 RefSeq gene 3577 3909 . + . ID=gene7;Name=D11S_2281;Dbxref=GeneID:8537962;gbkey=Gene;locus_tag=D11S_2281 NC_013438.1 RefSeq CDS 3577 3909 . + 0 ID=cds7;Name=YP_003264488.1;Parent=gene7;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264488.1,GeneID:8537962;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264488.1;transl_table=11 NC_013438.1 RefSeq gene 4049 6832 . + . ID=gene8;Name=D11S_2282;Dbxref=GeneID:8537963;gbkey=Gene;locus_tag=D11S_2282 NC_013438.1 RefSeq CDS 4049 6832 . + 0 ID=cds8;Name=YP_003264489.1;Parent=gene8;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264489.1,GeneID:8537963;gbkey=CDS;product=ATPase;protein_id=YP_003264489.1;transl_table=11 NC_013438.1 RefSeq gene 6918 7649 . + . ID=gene9;Name=D11S_2283;Dbxref=GeneID:8537964;gbkey=Gene;locus_tag=D11S_2283 NC_013438.1 RefSeq CDS 6918 7649 . + 0 ID=cds9;Name=YP_003264490.1;Parent=gene9;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264490.1,GeneID:8537964;gbkey=CDS;product=Cmgb5;protein_id=YP_003264490.1;transl_table=11 NC_013438.1 RefSeq gene 7659 7850 . + . ID=gene10;Name=D11S_2284;Dbxref=GeneID:8537965;gbkey=Gene;locus_tag=D11S_2284 NC_013438.1 RefSeq CDS 7659 7850 . + 0 ID=cds10;Name=YP_003264491.1;Parent=gene10;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264491.1,GeneID:8537965;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264491.1;transl_table=11 NC_013438.1 RefSeq gene 7869 8795 . + . ID=gene11;Name=D11S_2285;Dbxref=GeneID:8537966;gbkey=Gene;locus_tag=D11S_2285 NC_013438.1 RefSeq CDS 7869 8795 . + 0 ID=cds11;Name=YP_003264492.1;Parent=gene11;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264492.1,GeneID:8537966;gbkey=CDS;product=TriE protein;protein_id=YP_003264492.1;transl_table=11 NC_013438.1 RefSeq gene 8808 8987 . + . ID=gene12;Name=D11S_2286;Dbxref=GeneID:8537967;gbkey=Gene;locus_tag=D11S_2286 NC_013438.1 RefSeq CDS 8808 8987 . + 0 ID=cds12;Name=YP_003264493.1;Parent=gene12;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264493.1,GeneID:8537967;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264493.1;transl_table=11 NC_013438.1 RefSeq gene 8991 9698 . + . ID=gene13;Name=D11S_2287;Dbxref=GeneID:8537968;gbkey=Gene;locus_tag=D11S_2287 NC_013438.1 RefSeq CDS 8991 9698 . + 0 ID=cds13;Name=YP_003264494.1;Parent=gene13;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264494.1,GeneID:8537968;gbkey=CDS;product=CmgB8;protein_id=YP_003264494.1;transl_table=11 NC_013438.1 RefSeq gene 9710 10597 . + . ID=gene14;Name=D11S_2288;Dbxref=GeneID:8537969;gbkey=Gene;locus_tag=D11S_2288 NC_013438.1 RefSeq CDS 9710 10597 . + 0 ID=cds14;Name=YP_003264495.1;Parent=gene14;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264495.1,GeneID:8537969;gbkey=CDS;product=Cmgb9;protein_id=YP_003264495.1;transl_table=11 NC_013438.1 RefSeq gene 10608 11792 . + . ID=gene15;Name=D11S_2289;Dbxref=GeneID:8537970;gbkey=Gene;locus_tag=D11S_2289 NC_013438.1 RefSeq CDS 10608 11792 . + 0 ID=cds15;Name=YP_003264496.1;Parent=gene15;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264496.1,GeneID:8537970;gbkey=CDS;product=conjugal transfer protein TrbI%2FVirB10;protein_id=YP_003264496.1;transl_table=11 NC_013438.1 RefSeq gene 11857 12891 . + . ID=gene16;Name=D11S_2290;Dbxref=GeneID:8537971;gbkey=Gene;locus_tag=D11S_2290 NC_013438.1 RefSeq CDS 11857 12891 . + 0 ID=cds16;Name=YP_003264497.1;Parent=gene16;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264497.1,GeneID:8537971;gbkey=CDS;product=ATPase;protein_id=YP_003264497.1;transl_table=11 NC_013438.1 RefSeq gene 12888 13286 . + . ID=gene17;Name=D11S_2291;Dbxref=GeneID:8537972;gbkey=Gene;locus_tag=D11S_2291 NC_013438.1 RefSeq CDS 12888 13286 . + 0 ID=cds17;Name=YP_003264498.1;Parent=gene17;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264498.1,GeneID:8537972;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264498.1;transl_table=11 NC_013438.1 RefSeq gene 13333 13713 . + . ID=gene18;Name=D11S_2292;Dbxref=GeneID:8537973;gbkey=Gene;locus_tag=D11S_2292 NC_013438.1 RefSeq CDS 13333 13713 . + 0 ID=cds18;Name=YP_003264499.1;Parent=gene18;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264499.1,GeneID:8537973;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264499.1;transl_table=11 NC_013438.1 RefSeq gene 13706 15607 . + . ID=gene19;Name=D11S_2293;Dbxref=GeneID:8537974;gbkey=Gene;locus_tag=D11S_2293 NC_013438.1 RefSeq CDS 13706 15607 . + 0 ID=cds19;Name=YP_003264500.1;Parent=gene19;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264500.1,GeneID:8537974;gbkey=CDS;product=conjugal transfer protein TraG%2FVirD4;protein_id=YP_003264500.1;transl_table=11 NC_013438.1 RefSeq gene 15620 16036 . + . ID=gene20;Name=D11S_2294;Dbxref=GeneID:8537975;gbkey=Gene;locus_tag=D11S_2294 NC_013438.1 RefSeq CDS 15620 16036 . + 0 ID=cds20;Name=YP_003264501.1;Parent=gene20;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264501.1,GeneID:8537975;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264501.1;transl_table=11 NC_013438.1 RefSeq gene 16048 16371 . + . ID=gene21;Name=D11S_2295;Dbxref=GeneID:8537976;gbkey=Gene;locus_tag=D11S_2295 NC_013438.1 RefSeq CDS 16048 16371 . + 0 ID=cds21;Name=YP_003264502.1;Parent=gene21;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264502.1,GeneID:8537976;gbkey=CDS;product=TraR protein;protein_id=YP_003264502.1;transl_table=11 NC_013438.1 RefSeq gene 16380 16949 . + . ID=gene22;Name=D11S_2296;Dbxref=GeneID:8537977;gbkey=Gene;locus_tag=D11S_2296 NC_013438.1 RefSeq CDS 16380 16949 . + 0 ID=cds22;Name=YP_003264503.1;Parent=gene22;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264503.1,GeneID:8537977;gbkey=CDS;product=TrbM mating pair formation protein-like protein;protein_id=YP_003264503.1;transl_table=11 NC_013438.1 RefSeq gene 17274 17417 . + . ID=gene23;Name=D11S_2297;Dbxref=GeneID:8537978;gbkey=Gene;locus_tag=D11S_2297 NC_013438.1 RefSeq CDS 17274 17417 . + 0 ID=cds23;Name=YP_003264504.1;Parent=gene23;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264504.1,GeneID:8537978;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264504.1;transl_table=11 NC_013438.1 RefSeq gene 17731 17991 . + . ID=gene24;Name=D11S_2298;Dbxref=GeneID:8537979;gbkey=Gene;locus_tag=D11S_2298 NC_013438.1 RefSeq CDS 17731 17991 . + 0 ID=cds24;Name=YP_003264505.1;Parent=gene24;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264505.1,GeneID:8537979;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264505.1;transl_table=11 NC_013438.1 RefSeq gene 18006 18578 . + . ID=gene25;Name=D11S_2299;Dbxref=GeneID:8537980;gbkey=Gene;locus_tag=D11S_2299 NC_013438.1 RefSeq CDS 18006 18578 . + 0 ID=cds25;Name=YP_003264506.1;Parent=gene25;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264506.1,GeneID:8537980;gbkey=CDS;product=resolvase%2Fintegrase-like protein;protein_id=YP_003264506.1;transl_table=11 NC_013438.1 RefSeq gene 18688 18927 . + . ID=gene26;Name=D11S_2300;Dbxref=GeneID:8537981;gbkey=Gene;locus_tag=D11S_2300 NC_013438.1 RefSeq CDS 18688 18927 . + 0 ID=cds26;Name=YP_003264507.1;Parent=gene26;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264507.1,GeneID:8537981;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264507.1;transl_table=11 NC_013438.1 RefSeq gene 18937 21219 . + . ID=gene27;Name=D11S_2301;Dbxref=GeneID:8537982;gbkey=Gene;locus_tag=D11S_2301 NC_013438.1 RefSeq CDS 18937 21219 . + 0 ID=cds27;Name=YP_003264508.1;Parent=gene27;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264508.1,GeneID:8537982;gbkey=CDS;product=TraE-like protein;protein_id=YP_003264508.1;transl_table=11 NC_013438.1 RefSeq gene 21239 21550 . + . ID=gene28;Name=D11S_2302;Dbxref=GeneID:8537983;gbkey=Gene;locus_tag=D11S_2302 NC_013438.1 RefSeq CDS 21239 21550 . + 0 ID=cds28;Name=YP_003264509.1;Parent=gene28;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264509.1,GeneID:8537983;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264509.1;transl_table=11 NC_013438.1 RefSeq gene 21551 21748 . + . ID=gene29;Name=D11S_2303;Dbxref=GeneID:8537984;gbkey=Gene;locus_tag=D11S_2303 NC_013438.1 RefSeq CDS 21551 21748 . + 0 ID=cds29;Name=YP_003264510.1;Parent=gene29;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264510.1,GeneID:8537984;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264510.1;transl_table=11 NC_013438.1 RefSeq gene 21778 22182 . + . ID=gene30;Name=D11S_2304;Dbxref=GeneID:8537985;gbkey=Gene;locus_tag=D11S_2304 NC_013438.1 RefSeq CDS 21778 22182 . + 0 ID=cds30;Name=YP_003264511.1;Parent=gene30;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264511.1,GeneID:8537985;gbkey=CDS;product=single-strand binding protein;protein_id=YP_003264511.1;transl_table=11 NC_013438.1 RefSeq gene 22229 22465 . - . ID=gene31;Name=D11S_2305;Dbxref=GeneID:8537986;gbkey=Gene;locus_tag=D11S_2305 NC_013438.1 RefSeq CDS 22229 22465 . - 0 ID=cds31;Name=YP_003264512.1;Parent=gene31;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264512.1,GeneID:8537986;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264512.1;transl_table=11 NC_013438.1 RefSeq gene 22742 22897 . + . ID=gene32;Name=D11S_2306;Dbxref=GeneID:8537987;gbkey=Gene;locus_tag=D11S_2306 NC_013438.1 RefSeq CDS 22742 22897 . + 0 ID=cds32;Name=YP_003264513.1;Parent=gene32;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264513.1,GeneID:8537987;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264513.1;transl_table=11 NC_013438.1 RefSeq gene 22906 23523 . + . ID=gene33;Name=D11S_2307;Dbxref=GeneID:8537988;gbkey=Gene;locus_tag=D11S_2307 NC_013438.1 RefSeq CDS 22906 23523 . + 0 ID=cds33;Name=YP_003264514.1;Parent=gene33;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264514.1,GeneID:8537988;gbkey=CDS;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=YP_003264514.1;transl_table=11 NC_013438.1 RefSeq gene 23565 23738 . + . ID=gene34;Name=D11S_2308;Dbxref=GeneID:8537989;gbkey=Gene;locus_tag=D11S_2308 NC_013438.1 RefSeq CDS 23565 23738 . + 0 ID=cds34;Name=YP_003264515.1;Parent=gene34;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264515.1,GeneID:8537989;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264515.1;transl_table=11 NC_013438.1 RefSeq gene 23832 23957 . + . ID=gene35;Name=D11S_2309;Dbxref=GeneID:8537990;gbkey=Gene;locus_tag=D11S_2309 NC_013438.1 RefSeq CDS 23832 23957 . + 0 ID=cds35;Name=YP_003264516.1;Parent=gene35;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264516.1,GeneID:8537990;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264516.1;transl_table=11 NC_013438.1 RefSeq gene 23959 25239 . - . ID=gene36;Name=D11S_2310;Dbxref=GeneID:8537991;gbkey=Gene;locus_tag=D11S_2310 NC_013438.1 RefSeq CDS 23959 25239 . - 0 ID=cds36;Name=YP_003264517.1;Parent=gene36;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264517.1,GeneID:8537991;gbkey=CDS;product=nickase;protein_id=YP_003264517.1;transl_table=11 NC_013438.1 RefSeq gene 25246 25746 . - . ID=gene37;Name=D11S_2311;Dbxref=GeneID:8537992;gbkey=Gene;locus_tag=D11S_2311 NC_013438.1 RefSeq CDS 25246 25746 . - 0 ID=cds37;Name=YP_003264518.1;Parent=gene37;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264518.1,GeneID:8537992;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264518.1;transl_table=11 NC_013438.1 RefSeq gene 25917 26159 . + . ID=gene38;Name=D11S_2312;Dbxref=GeneID:8537993;gbkey=Gene;locus_tag=D11S_2312 NC_013438.1 RefSeq CDS 25917 26159 . + 0 ID=cds38;Name=YP_003264519.1;Parent=gene38;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264519.1,GeneID:8537993;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264519.1;transl_table=11 NC_013438.1 RefSeq gene 26170 27489 . + . ID=gene39;Name=D11S_2313;Dbxref=GeneID:8537994;gbkey=Gene;locus_tag=D11S_2313 NC_013438.1 RefSeq CDS 26170 27489 . + 0 ID=cds39;Name=YP_003264520.1;Parent=gene39;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264520.1,GeneID:8537994;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264520.1;transl_table=11 NC_013438.1 RefSeq gene 27514 28977 . + . ID=gene40;Name=D11S_2314;Dbxref=GeneID:8537995;gbkey=Gene;locus_tag=D11S_2314 NC_013438.1 RefSeq CDS 27514 28977 . + 0 ID=cds40;Name=YP_003264521.1;Parent=gene40;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264521.1,GeneID:8537995;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264521.1;transl_table=11 NC_013438.1 RefSeq gene 29041 30354 . + . ID=gene41;Name=D11S_2315;Dbxref=GeneID:8537996;gbkey=Gene;locus_tag=D11S_2315 NC_013438.1 RefSeq CDS 29041 30354 . + 0 ID=cds41;Name=YP_003264522.1;Parent=gene41;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264522.1,GeneID:8537996;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264522.1;transl_table=11 NC_013438.1 RefSeq gene 30474 30926 . + . ID=gene42;Name=D11S_2316;Dbxref=GeneID:8537997;gbkey=Gene;locus_tag=D11S_2316 NC_013438.1 RefSeq CDS 30474 30926 . + 0 ID=cds42;Name=YP_003264523.1;Parent=gene42;Note=identified by Glimmer3%3B putative;Dbxref=Genbank:YP_003264523.1,GeneID:8537997;gbkey=CDS;product=hypothetical protein;protein_id=YP_003264523.1;transl_table=11 ###