core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3578908	3579633	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	1	726	GCA_000012825_1_1_2863	GCA_000012825_1_1_2863	+	5163189	.	COG3279	DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]. 	MILNCAIVDDEPLALELLRSYVEKTSFLRLVGRYSSAVQAMTEIPLHEEVHVLFLDIQMPELNGLEFSRMVSPETRIIFTTAFGQYALDSYKVNALDYLLKPISYVDFLQSVNKAVQWYELKQKADNGVDADEADDCIYVKSDYKLLRIALDRILYIEGLKDYIKIHVEDEPKAILSLISMKAMEEKLPSSRFIRVHRSFIVQKSKIKVLDRGRIVFGKEYIPISDSYKQELQIYLNSHSV*	mmseqs_cdd	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0001	persistent	direct	high	725	0.999	GCA_000012825.1_02896
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3580012	3581193	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	1105	2286	GCA_000012825_1_1_2864	GCA_000012825_1_1_2864	+	5163189	.	PDB:1Z19_B	Integrase	MANFSLVIVPAKVLTGGKHKVRVMVSHNGQTRYIPTDIIIDSISEFKEGRVVKRPDKDILNLRLKKICDKYFERYMELEFSNCLTCSQLVRLITDNGRDKCHTFEEVVDEYLSQIDEEDRGKTYKLYRLAANKFIQFTGTGAPMEHITPIRINGYISALKKQRLSNTTINIYITLLKVLINYAKKMQYVNFKVDPFVTAKVPSSRKRETFITVEQLKRLRDLDVKKHNMMIVRDIFMLTYYLAGMNLVDMLDYNFKNTDEVNYIRRKTRNTKEGNSMVCFTIPDEAMPLIMKYMDKKTGKLVFGKYRTYVSCYNTLTRKMKNLALEVGIRHDFTLYSARKSFVQHGFDLGIPLSTLEYCIGQSMKEDRPIFNYVSIMKVHADKAIRMILDNLK*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0002	shell	direct	high	1181	0.999	GCA_000012825.1_02897
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3581303	3581464	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	2396	2557	GCA_000012825_1_1_2865	GCA_000012825_1_1_2865	+	5163189	.	.	hypothetical protein	MTDEELKQEIEKVKKMISDYESLKTVIAPTSEEYERQMNILLDRLGNLLKMKD*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0003	shell	direct	high	161	0.994	GCA_000012825.1_02898
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3581478	3581927	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	2571	3020	GCA_000012825_1_1_2866	GCA_000012825_1_1_2866	+	5163189	.	PF16476.5	Domain of unknown function (DUF5053)	MGGVLKLYDMDNLQEKLAELKTYIGKTDEESKARFDSLSAEIKAMKLTDEEKTIFSNFMMQGLEDISNSMDVIERELRIREQLKEAVEILPLAYIARNYFGKSASWLYQRINGYKVRGKVYTLNHEEIGIFNRALKEIGEKIGSLSITG*	hhsuite_tools	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0004	shell	direct	high	449	0.998	GCA_000012825.1_02899
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3582203	3582427	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	3296	3520	GCA_000012825_1_1_2867	GCA_000012825_1_1_2867	+	5163189	.	.	hypothetical protein	MSRIIKNCPCTLEVWSGPDEPILKEWNMYFNCKNEIKEYLNSKLQEFKGNMVECYVYQLHKGKLSEVSVCLEVK*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0005	shell	direct	high	224	0.996	GCA_000012825.1_02900
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3582705	3585209	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	3798	6302	GCA_000012825_1_1_2868	GCA_000012825_1_1_2868	+	5163189	.	.	hypothetical protein	MKISIFSYALLCLLGISLACCESKDENLKSGSSPNDKWEFAYEKNFVDSLDAIYNKKEGVIALFGYKDIPTGLNITNEDFIVNKGRIICITRVNKDTQTLDESMATIIVCDSTLFPIRIANKDINIIASKRDEYHFDCIFYNLQKDEWIECNNLEYNLKNIEEVSSTRALATGGYSEFNPNSVLKVISIATNIVNGIRKGWSDDVLGFFYENLQILSQYNDEVGLAVGVIATPGWFKLLPVAEYLTAKLDKLILKEMGKVHFTLEDPKIIDGTTCEIFYEIDGLHQYGIVNTEIGMEIYNKSGYFNYSSLKSGNYKGSQIWANLSTGQYTVELYVRSKKFQWLEFRAMKTIYMFELELDHYDINPKIKYVNDEVTFDIDVYLKGDNNELNEWIKRGVQFGYYIKYSNNTPEYYPVANFSSIFEMTPLTCKLIINKNNFPEEYKNYSTYEAIAIDYYIGTYATFSKDNITHLDEKPIDGLIYKEKPFTITQETISTTETSATLVCEYGNNSFWNLTCGVEYYWKGNKSEIDLGPLEDGEHKITLTGLKPSTTYTYRSFMKHGNKYLYADNEKTFTTNSGCHIDFNIEYPNYSDSKADEVVCRIALLPVYENEDQRNSIIKKYAVLYKDGKEVTRSSYEYSDRIILTHVFKREELSVDYVNYTAVPKDGHWQASMEFEKLNEKGEIITMPTDVMKDVNLKYDTKPVMVIYKCDIGRCDAYPDPNYTHDEHRFLIKMSSFTRGSFWRKSWIGISSNEVIDGKVHWFGDDFSLGGNWGVDYTNNNKPNQLLMEFKDYNGNVIKSNSIPIQTNEKGCVIESHYDNTSEVISKYGKQWNF*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0006	shell	direct	high	2504	1.0	GCA_000012825.1_02901
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3585381	3585626	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	6474	6719	GCA_000012825_1_1_2869	GCA_000012825_1_1_2869	-	5163189	.	.	hypothetical protein	MAEKKESYSEEELNEMIVWFNNHADELPKEMQINKAAFTPDLKLTVESCIMQAKQCLGNYKMAEAFRMLQQIRENLENAVE*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0007	persistent	direct	high	245	0.996	GCA_000012825.1_02902
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3585722	3586216	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	6815	7309	GCA_000012825_1_1_2870	GCA_000012825_1_1_2870	-	5163189	.	.	hypothetical protein	MLAPFMCLFLLFGSCGSSYKSVNSDTEIIQKDSTRESVNIIHGSSTSLSELITTNSNYVIDFRIYDTRKPPDSLTGKPPLLADGHVEGDFSKNRKKETATKDSTEVKADKETTSNTREENRSETIKEKKESTLLKQIGFACVCVTVLIIVGLVTKKHWRNNDSS*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0008	persistent	direct	high	494	0.998	GCA_000012825.1_02903
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3586259	3586657	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	7352	7750	GCA_000012825_1_1_2871	GCA_000012825_1_1_2871	-	5163189	.	PFAM:PF08291.10	Peptidase-M15	MKFFTIAELCKSTTADRLGINNRCRQEHVTALTALVDNVLDPLRTWWGKPITVNSGYRCPELNAAVKGSKTSQHMKGEAADIDTGDRQQNKLLFEYIRKNLPYDQLIDESNFAWVHVSYRADGNNRMQVLKL*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0009	cloud	direct	high	398	0.997	GCA_000012825.1_02904
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3586654	3587040	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	7747	8133	GCA_000012825_1_1_2872	GCA_000012825_1_1_2872	-	5163189	.	.	hypothetical protein	MELNDWLAIIGAFGGLEAVRWGVTFWVNRKTNARKEDASADSMEDENERKQVDWLEERIAQRDAKIDALYVELRNEQSDKLAWIHKCHELELQLKDAEHNRCDRPDSECGRRIPPRRATLIKDKEEKK*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0010	shell	direct	high	386	0.997	GCA_000012825.1_02905
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3587322	3588545	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	8415	9638	GCA_000012825_1_1_2873	GCA_000012825_1_1_2873	-	5163189	.	PDB:1Z19_B	Integrase	MLEKIRYRLVFNRQKKLNKQGTALVQVEAYLNQRKIYLKTNVYLKPECWSREGAQVINHPQSNELNAMLYEYILYLQGIELGYWKRGIPATLSLLKDAVKKKSAVNVSFSTFAKSAIDNSDKKQSTKDNLHSTLAVLNDFRSGLDFKDLTYTFLRDFEQYLREKGNAVNTIAKHMRQLRTLVNEAINQGYMHADAYPFRKYKIKQEKGRHEFLTPDELKKLETVEVEEKSMRHVLDAFLFCCYTGLRYSDFCQLTPENFIRVNGKRWLYFKSVKTGVEIRLPLHLLFESRALGILDRYPDIGSLVSLPCNSEVNKQLRKLTGLCGIKKRITYHVSRHTCATLLVHQGVAITTVQKLLGHTSVKTTQIYSEVLSSTIVRDLKNVQRKRKKVKMFPDKGLRTSDFIDNR*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0011	persistent	direct	high	1223	0.999	GCA_000012825.1_02906
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3589713	3589982	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	10806	11075	GCA_000012825_1_1_2874	GCA_000012825_1_1_2874	-	5163189	.	.	hypothetical protein	MNSLKLFPFMPKGILSTDEEVNSATASGMYHVFGRDGISVVSNYSIMIVFNDGQGYVIQMTFRLGEDVVGFRRNYNGVWGDFRSFVLAS*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0012	cloud	direct	high	269	0.996	GCA_000012825.1_02909
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3590019	3590591	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	11112	11684	GCA_000012825_1_1_2875	GCA_000012825_1_1_2875	-	5163189	.	.	hypothetical protein	MSDLNLENIVGFKAVDKNGNERQVTVDEMTELVSARIVSAASEISTFAAAAAAGTDEFEDQLPQSDTFSWLRTLDGSKNPTLTSSSAAAKVLGELLGNPKGTKSFSSWSEFTDFVNEMPIKTIQPFVSNFNAFAGEGFYGNVVQGLVIKQLEDAVFIFGIAIDGTLIFRKRNYPDVSTWEDPKIIIHSNN*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0013	cloud	direct	high	572	0.998	GCA_000012825.1_02910
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3590604	3591101	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	11697	12194	GCA_000012825_1_1_2876	GCA_000012825_1_1_2876	-	5163189	.	PFAM:PF13699.5	protease	MKELWQLIKMLFSSKPGDFDTPELLPMKHYPFKRYRFMMWCGRMIYRAENKENIDRYMQTYAGKESMTHETIHLRQAQVIGSWVKYYWRYFVEWVKGNPICHPASSAYYTISYEMEAYANEGNLDYPVNYDGSNLSRYKIKGGRKKLYKSIGGTSKAWKTYIRTL*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0014	cloud	direct	high	497	0.998	GCA_000012825.1_02911
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3591103	3591375	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	12196	12468	GCA_000012825_1_1_2877	GCA_000012825_1_1_2877	-	5163189	.	.	hypothetical protein	MRINFAQFPIYDGIKKEKLIASNITEAFGDWIYKNVAGLKAHLLAEKIFKSTVDGVELDEEEVDIIRRSTSMLPGLLADSLNDYLDKKKE*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0015	cloud	direct	high	272	0.996	GCA_000012825.1_02912
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3591390	3595472	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	12483	16565	GCA_000012825_1_1_2878	GCA_000012825_1_1_2878	-	5163189	.	PDB:3GS9_A	tail-protein	MTELELQELTDKIIAKLKADSLTIDQLTQTNVLTGMDFLELNSGRKVSLDDLRKFIRGYGIYLEIISKLDNETIPTDNNVFSSLRVLFEISKALEELKKIYLRKDQDDETKYLLKLLGGAKIGKSLTVGDFITGVQGGYIGEDARAELEALVLRSSLSVPELRFNRQTYFEGYNTISPGGGLKIKSFVANSDGSYTVTPDLEDGVPLGQKPDDILLGFWHDKSVTTGDFIGFRKIQYRITSADYDENTFVMVPRPGYEFVPHNEMRLGQTGNFTDKERQTYIIIDVRDGNCCITLVDNANTWDPEPAQMKSWFGKKKGMTINGINCDRFSAVLQDIIMTGLIFQIDEITGSTVRVPIDFPSWEPGRKYAYYSRVPHNGSTWLCVNDKGTTSEPSENNPDWLVSAAKGDKGDPGLSVIGGGHWESSKTPYEVNTMVTLAGCVFISKVKTSNPPIKIARFRNGNYRKKKDGGYILAGKSADWTVHEDWEMLLDGRELKGESITFLGEFASHPSNPKEGDSYRNTADHCTYIYRNGLWMVMVKDGTDGKDGKGYEWIYTRTNIIGLTPDKPDSKQQDDYIPEGWTDDFLGVDADHQVEWACKRVKRDGVWSEWSTPAPVHRWSKDGESNIMADLDNEMVSVALTSTGVTTSAQSWTTHVSMWYGTEKLTLETLTVSTPAGFTASTSKATGAVAISVAAGKSVPEQNTVTITLAAMKNGQLYTRELTFKITGVRGGADGSDAVIYSLVTSATMVSKNKNGGYSVASVSCRRMKTVGAVTTATTDGELKYSRDGAAEVPIGDGVGVASGNFTSSLKFVFYVNGQAVDVETVPMVVDGSDGKDGESITAAGHWESANTPYAKNSTVSFAGGSYLSKVETSNPPIKIAKFRNGRLRRKRDGGYILAGRSANRTVHADWQEMVAPVGPSASYWLDSPVSVINFTSTGTPSPSGFLVTCKQNVAGNVSTCSTLYLAARKYNGSWLAHVGATLSNQISVPATAGYTQFAVRAYKSASDANAWNNNFVAEKGVGVANDGSIGATGATGAFPRDRGVWASGQTYVWNADYRDKVIYLIGGVYYNFLVKNYGASVTAAPTSVNGDSNWEAMQKFVNIATDTLFADGANVAGFMFKDKVLKSFNDKGETLLINGVTGYFKCKNAEITGTITADKGRIGPFSIASGILSSKILYENETNKYVGFNLSAGQIEFYNERTFANVRIGGNTQFVTIEGIKYDAGIDIQSPNAMIGMHIKTPSIPLFVEGGNIFLHPNNDSYVSLRGIVGNWRNISVKASLNNNDDNVMFINRDNIEVTLPPDVPGHTIYFKRMSGGVRLTGGRILPAPGGQEVSYIDLDFASGFIKCMGNYWVMFYCG*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0016	cloud	direct	high	4082	1.0	GCA_000012825.1_02913
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3595469	3596296	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	16562	17389	GCA_000012825_1_1_2879	GCA_000012825_1_1_2879	-	5163189	.	.	hypothetical protein	MYIVSPFTPIFFKPSTDMCRASGKYMQIFAPSDEVMIQVITRSESRPITGKVINIVTGHETVIDWQIWSMNHTDKIYYHVLTALAEGCYRIDINGMVSEPFRITSDTSELSRTTLIQYSMKDNRQRQDAVFWISDTQYFFDWRAPGGFMDDNWVFGVNNEQFTTYDNNLSEIYALETTQKTFTLGNAQGCPVWFGELLNRILCCTYVYFEGERFIRADANVPEMSQPIEGYKSYIFKQILQDIKIVDYTESENLIKIRRVDDKSFRKVANKILTV*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0017	shell	direct	high	827	0.999	GCA_000012825.1_02914
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3596300	3598978	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	17393	20071	GCA_000012825_1_1_2880	GCA_000012825_1_1_2880	-	5163189	.	.	hypothetical protein	MICKYYLMIGSDTVDTAGNSCIDVSRMIANISDIKTTYSRVDLGGVVRKCGSTIEFVEEARERFISLYNKDKLKSLASFAVYGISNNWTYNKLFECPHDFSTFRYDSYRARIGCIDNSAAALIKANKGTIYEYPVSEMREDIPLNYDGVRIRNEVSFQIIGETVEDKEYMEKFIPKDAWWWIPYVNYTVTNEVNNRSFVTMDQEETFLKFGTDCGWGFPANSCTSSFFLECIEDNYVTVDFSNFYIESKKFGHVLCKITTSGNIQLLTCGYSNLLGLDANTNTSAVKWSGKLLAGERLQYAIFNHQRMSVQDGRTVRIHNNTGITSWNDLGDPVNIDVISPLKLLSRLLESISANSERIYCSIKPTIRTYISNAFTEKDNWRLNGSRLVAAESIRNFEKAKIYSSFSKFCEWMETVFGYVYTIEMKSRPNTDLPYADILNNSHDFEGFTTYKANITSITDNFTLHFSTTDGYFLAIVYASITLDRSPNFPGYERYQVYDNANKSYKVHEDRYYHDTVDDMYYHAVYDDGSKKTSLLECQLYDIGLSDYEGVQTFGGTIISVETDSGSFTGPVDESNILYVRRSKQFMYSDNDKYYSSFTGSSNYNIADRARTDMVFFTNEQYYVIVGTSLMKCTLKENVNEGEKVPYVVFKHRDEVFGSTNLKTIHSISEPEYSVDSSRIYSEIEIGYEKQDYDLGNNGNDEFNFSTTYTTGVTLNNSKLSLISPYRADCYGFEELIGKRGEETSSSDSDKQVFAVKCINNGGKYIVDRTIMVEGAYTNSVFNAPLAPVYMIEANKRYLASFTSLLKFASTEGNAGIKLDDRAVNTDVSLDDPLFGPGNIKFSTDSFIFPEDWNNTIVQIEWNGMIFKGNLMSLDVKPQETEALKYELIEIV*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0018	shell	direct	high	2678	1.0	GCA_000012825.1_02915
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3599139	3599471	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	20232	20564	GCA_000012825_1_1_2881	GCA_000012825_1_1_2881	-	5163189	.	pfam10902	WYL_2, Sm-like SH3 beta-barrel fold. WYL_2 is a family of Sm-like SH3 beta-barrel fold containing domains. WYL is named for three conserved amino acids found in a subset of domains of this superfamily. These residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system	METRTNFRVRVMKYAHQLLKATGKSWRYCMLKAWELYRLAKKMRTETVRFAYEKTDGSIRYTEGTLMNLPAGATVRGKRITKPSYKTFAYFDARKNEMRCFRIENLITVY*	mmseqs_cdd	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0019	shell	direct	high	332	0.997	GCA_000012825.1_02916
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3599577	3600062	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	20670	21155	GCA_000012825_1_1_2882	GCA_000012825_1_1_2882	-	5163189	.	PRK11924	RNA polymerase sigma factor; Provisional	MTDFNREIADLYPWLFKIARRYCSSVCDIEDLVGDTIYKVLSNKEKFKEGRALKPWCEVIMLNTYITAYNRRSLIRFVGCDNIKEIFSHNQASDDLMVHDIQAAIRRCHNRTCCMDCVVYYAHGYSYKEIGKMVGIPVNTVRSRISYGRELLRNELDLTVK*	mmseqs_cdd	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0020	shell	direct	high	485	0.998	GCA_000012825.1_02917
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3600059	3600328	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	21152	21421	GCA_000012825_1_1_2883	GCA_000012825_1_1_2883	-	5163189	.	.	hypothetical protein	MNNKRIVNALAALILPGLDRLDQKCNRIISELSELKSTLRHSERNIDTLIDKLENSASELLKQAQMYHLELEKNLSEELSLFTLKIVKK*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0021	shell	direct	high	269	0.996	GCA_000012825.1_02918
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3600429	3600998	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	21522	22091	GCA_000012825_1_1_2884	GCA_000012825_1_1_2884	-	5163189	.	.	hypothetical protein	MIERLNQLSLAQFIELSCGDNSVLLEENENASEKEMKQLASRFILEYRTLMNPTGVKAIMAEKENALKIDARIFLLKLCKSLCILEGYEQVREALKESLPANLTDDRLKKAVENMLHEAEFYKKRTEDMAVADNPAINENAIRASFDSEIAFVMTYFKMQIDIHTINAAVYANIVQRANTEIRLRTRSR*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0022	shell	direct	high	569	0.998	GCA_000012825.1_02919
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3600995	3604858	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	22088	25951	GCA_000012825_1_1_2885	GCA_000012825_1_1_2885	-	5163189	.	PFAM:PF10145.8	minor-tail-protein	MTELKITDLVDEKEIEQVKQLGLEIEKVKSIYGDAAKELAKGLKMNVEVVGDLDKLNAVIITQAKKADGATNDLNAALKKQSELAERVAKSLDEQIKSGNLSATQMKKLTDASKKNAESLEKLAKAEATVEKAQRTSNTAKKSANVTEQERQKIITDAIAATYKEIHSIQEANDMNRLLRKAVKLVRDTDEEYIQTIGRLNSTIGVNTDYVKRNSDRYTQQKMTVGDYTESIKRAWMEIQRGNSAMKNMGIIAKSTGNLLKTSFNSGISQVTIGVGSMIKGMLGAQAVIAGIQKLTGAIRQGVNTAIDFEAANSKLAAILGTTKGEIKDLTADARRLGEATKYTASEATNLQIELSKLGFSKTEILDMTEGVLKFAQATGAELPEAAALAGAALRMFGADTEETERYVSAMAVATTKSALSFSYLQTAMPIVGPVAKAFNFTIEDTLALLGKLADAGFDASMSATATRNILLNLADGSGKLAQALGGPVKTLPELVDGLKRLKEQGIDLNSTLEMTDKRSVAAFNAFLTASDKIVPLRDQITGVEDDLNKMADTMGNNVQGALYNLSSAWESLMLTIMDNTGAMKDFIDMATNGIRKINEWLMNAEQLADKQVETAKRAASPYAEESIKSEIIAINRLKDEYLKAGNDETTALEKAKNERIAILEQELSKQQSLRNKFYNENQQLWKDMGDASFFKQAFGLEKTNAEFSEEQTKTWNEYLDKVTKVTSLEKQIADIRKISNSTDVTIGTTRLTDKEKKALEKAEKERLAIKEKYQQSELALMDEGLEKQIKSISLNYSRQIAAIRGNSEEESATRNNLAEKMEKEISDAKIKFALDAEKNNLSNRMAIIQKGTQEELDLKIKMLDLEREEEMNTAEKSGEDVFLIDEKYKKKRQGLLEEFASEQILQIADNAAAEQAVRDRQFQTDLLNLKRRKETENMSSEQYAEEEYLIKLDYVRKTTEAAIDAIEQELNVDNLSAKDRKKLTEELCKLKADLANKEADAEITAIEKINKAEEKAYKERIKNLKKWLQTASQAVSTIGDLVGTLYDGQLDKIEEESEANTDAHDSEIERIELLKEQKIISEEEAQARKRAAEDKTRKKEEELEKRRQDIQYKQAVWDKAANIANASIATALAITEALPNFVLAALVGAMGAVQVATIMATPIPKYAKGTDNHTGGPAIVGDGGKKEIVVYSGKAWITPDVPTLVDLPRGTQVLPDAGLYHLSSVDFPNISQQHVGKTENNIVVNNDYSSLNHELKGMRSDMRKMAKQQHRDAYDFNYELYKRTRL*	hallmark_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0023	shell	direct	high	3863	1.0	GCA_000012825.1_02920
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3604861	3605049	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	25954	26142	GCA_000012825_1_1_2886	GCA_000012825_1_1_2886	-	5163189	.	.	hypothetical protein	MSCGCKIKKEMSELKRVSELARKAAMLDECIYVIYLKADGSYSFDRLGTEIKGTIVEYRHYL*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0024	shell	direct	high	188	0.995	GCA_000012825.1_02921
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3605057	3605578	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	26150	26671	GCA_000012825_1_1_2887	GCA_000012825_1_1_2887	-	5163189	.	PFAM:PF05069.12	tail-protein	MANIYEVSKTINAIAAGLEEECLNCMDANKSIIRDCIQEQLYSGMDGTDRCLSPTYDNDPYFNEPGPWQNKPEKYKRWKEKITPPVVSFLLNLPPRPSEIPNLFITGTFYDSIRLERLNRSMSVFTEGFIDGPDIQKKYGDNIFALGSSAKEYFIIMHLRPWIENFFKECRYK*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0025	shell	direct	high	521	0.998	GCA_000012825.1_02922
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3605620	3605796	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	26713	26889	GCA_000012825_1_1_2888	GCA_000012825_1_1_2888	-	5163189	.	.	hypothetical protein	MKIEGVTFVENAVKSMTKEEFIERHIKVLWQDRKEASRKKMLSDTYDKIVGKEATKED*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0026	shell	direct	high	176	0.994	GCA_000012825.1_02923
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3605793	3606626	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	26886	27719	GCA_000012825_1_1_2889	GCA_000012825_1_1_2889	-	5163189	.	.	hypothetical protein	MKKIRTCAGTHINSGSSACKIDWSKVKGAILVEPGTKLPDDVTAEKLAEMCHADRPGRIYPISPFFEYAKNGGEAQISAVGYGPNQFNGLNAQTDTFTLAGFDEVLNAQLLKAANREWDVYFWNKDYMLIGYNDGTDLLAGIPMSTVYPTVTQYPASGAKSTMTISFCHMDIEDSLLNFDFIQLGFDPKYSLRGLIGVELVSMTSNKYKIIEKIGAYDRTPEFGQLIADKAAEVLDNATTATYADGVLTITPKDSGTPSLKAPSILFENNIKYIEQV*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0027	shell	direct	high	833	0.999	GCA_000012825.1_02924
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3606626	3607192	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	27719	28285	GCA_000012825_1_1_2890	GCA_000012825_1_1_2890	-	5163189	.	.	hypothetical protein	MTMDIVDIFRDVVSKASRNLKILCPDGNGGFQEVDNPPLNYIFGNSQYIKDTLDVYSQSERQLPLKFPLVALFCPISERRDSRHYYSKSKVSLVIACPSTKDWTNEEREVNSFKNILRPIYGRLLDVLLEDNRFDWGADDKVRHVYSENYSYGRYGAMTATGQEVSDPIDAIDISSMEITINNPNCRR*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0028	shell	direct	high	566	0.998	GCA_000012825.1_02925
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3607189	3607710	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	28282	28803	GCA_000012825_1_1_2891	GCA_000012825_1_1_2891	-	5163189	.	.	hypothetical protein	MSMLVDVSYFISGPRQIRNATTAKMPTAEGLSANNVIYGYIRSFQRKFLNDVVGFTLAGQITDYLKMIENESPKTKNDTVSPYEYVCRQLRESFADYVFYHILRDMNTDATVTGLIQLKSSNKHVSPLQRQVSTWNTMVERNKQFVCWASSDECPFKVNVNKNLLTPINSFNL*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0029	shell	direct	high	521	0.998	GCA_000012825.1_02926
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3607713	3608135	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	28806	29228	GCA_000012825_1_1_2892	GCA_000012825_1_1_2892	-	5163189	.	.	hypothetical protein	MKYILEGDEKELGRVLREQRIRIGRGLIKITPISGTLVHEDYALKAIEAQVKELTDTLALKDGQIESLTSERDSLRARMTEMEASGSMPETDEKEVDMKDSKTLNITDSNNLPEDDSMSIDMDNVNPSVNTSGKKTTKKK*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0030	shell	direct	high	422	0.998	GCA_000012825.1_02927
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3608141	3609829	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	29234	30922	GCA_000012825_1_1_2893	GCA_000012825_1_1_2893	-	5163189	.	PDB:1IF0_A	Major-Capsid-Protein	MKTFLKIVGKYQSLIMFAIVAVVCTVCALNGPEHVTGLLVAAPVSLISFAKQEKDMTDEEKSLLGSIQLKCKQVCDEFAEGLMTKEDIENRFKDISKNITEQLKHLSNFEDIKKSYDEQAEKVTALAEAFDKIKEKGGHMTSVNEVEKAVGEFLDSPACQDYFANRTKTSGSMNLDLKGIVSITESSNTPRSNNRSTGRVVTAVNEQKLNLRDLMMVEQGDPSALSISYEQVYDFDRNVMVVAENGMLAESSLKFKEEFTNVKRIGTHMNLSKRLLKAKQYVVSFILNRLPLWVKFSENYQIMFGDGTGDNLKGITRYEGVDCVSKFIADNYVTISAGAIESLEAANGQTIITLAAANDKIIDKMKVTLSGATVETGLNDTFDIHKINDRKFAIDFDYKGTETSVAKMSGAIKSGMFGSVEDPNMKDVVNAIFAVLNFGQYSPNALVLHPSTVFTISTAKDTTGRNLELITEVNGRKYIGNVPVIECNAIGVGKYFAGDLLNGCSLIDYTTLAIEFADDVNTKLKNMTTVMIQEELMMPVYMPWAFAYGDLDDVLEAITKSA*	hallmark_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0031	shell	direct	high	1688	0.999	GCA_000012825.1_02928
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3609855	3610904	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	30948	31997	GCA_000012825_1_1_2894	GCA_000012825_1_1_2894	-	5163189	.	PFAM:PF04586.16	head-maturation-protease	MDKELRSLQLKTKANDVDEQKGIVTIAVNGIGIKDTQGDISDSGSFNKTINEFFLKRGKHLLDHDKTKLIGCPIEAREDNMNLVIVSKMNLNKQIGRETFEDYKLYAECGKTLEHSIGVKAVRRDVNDPAHVKEWFLGEASTLQAWGSNPQTFLVDIKSDDSIDTQRAKLTSSLEMINKALNMRYSDERLNDLSMKLDLIEKALTGNSNMVTCPECGHTFDYDQQAETTFNNQVLDLAAMYQRWIVEDIVRTEMDKLKPEIREQVIAVLDAHKSLDVDLTGKSIEDIVSYVRCPHCWSRVYRTMISKIADTKPEAAVAPSDDTRQPADDKGNEKHETNLSLAAKLSQFI*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0032	shell	direct	high	1049	0.999	GCA_000012825.1_02929
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3610858	3612285	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	31951	33378	GCA_000012825_1_1_2895	GCA_000012825_1_1_2895	-	5163189	.	PDB:8CEZ_K	Portal-Protein	MTILENIFGKKKSTDISSLVAQEVDKIFSALSKRRFRLSEDIYSPYVADSNFLTLFNTVGEIFFPIDFLASRIAGGRFMLKKASDDSVVWNNKQFNDLIDRPNCLNSFQGIVYQHFVYKYATGNSYLKCVVPEAFQTLKTPIYKKCKNYWVLPSDKVTIRLKNYIPLFGNAEKEDIIDYYLLQYGLNYAEQINPNFIYHDQDGNTDYRNDNFIKGHSRLYSVKMAIDNLIPVYQARNVIYMKRGALGIFVSEKKDETGTVAMTEDEKRNLREEFNGNYGLDNSRFPYGLSDVPMDFIRTNLSIQELQPFEETLNDAIIIAGVFGVPPELVPRKDHSTFNNQKSAEKGVYTSKIIPAARRYASELTRMLGYDRDGYYIDVDFSHVDCLQEGQKEKEEVSKIISERAMGEFQNGIITLNDYRARIGESKVENSLFDKLLYEMSDKELERVKKILSITKKSNDNGQRVEKPSVEDEGE*	hallmark_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0033	shell	direct	high	1427	0.999	GCA_000012825.1_02930
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3612414	3614432	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	33507	35525	GCA_000012825_1_1_2896	GCA_000012825_1_1_2896	-	5163189	.	PDB:5OE8_A	Large-Terminase	MVINYKKLNPNCFHLLRYLQDASLRFIILYGGSSSAKSFSIAQAILIMTLQDSENTKVFRKVGAALKDSIYEAFKEASKTLNVYHLFDFKERRIVCKFNGAKITFSGLDDSEKIKGLENYKRVFLEEFSDFEHGDFKQIRKRLRGKHGQQIICSFNPIKITHWIKKEIFDKDKWHDIPMEVTLGGKRIPEELTTVKSLRMNEPKQIMNVRTKEIVEHPGDTVLIQSTYLNNFWVVGSPDGTYGYYDEQCVADFEKDRINDPDYYNVYALGEWGVIRTGSEFFGSFKRGQHSGERPYNPSLPVHLSVDNNVLPFISISYWQVDFTTGIKIWQFHETCAESPNNTVRKSSKLVAKYLKSIRYCDKLFVHGDASTKSANTFDDEKRSWMDLFIETLKNEGFDIEDKVGDRNPSVAMTGEFINAIFDFQIPGIEICIDESCTISLEDYMSVQKDSNGGILKTKVKNSTTKQSYEEHGHLSDTFRYIVHDLCHESFIEFSNRRKRNLYAGKGMLDFFNPDTVHNYTDSVVYIMPNVAGTFLLVHTRRCGNTWHLTDAMFKDTSSVDEIKKAIMCHEAKTHIFECSPVYYQMVKELRQEMKGADIRVIKEYSDVDKRISATSDFIKKNLLLSPKKFEESREYGNFVTNLMDYNVDCENKGASTVLSGWGHYIIKSRSS*	hallmark_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0034	shell	direct	high	2018	1.0	GCA_000012825.1_02931
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3614496	3615041	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	35589	36134	GCA_000012825_1_1_2897	GCA_000012825_1_1_2897	-	5163189	.	CDD:pfam03592	Terminase-small-subunit	MTSKEDRPLTLKQENFCQYYVDIEGNASEAYRMAYNASKMKAESVWTEASLLLSNPKVSQRINQIKEQRAKDSAVRREAVEKVLYDIVMADPKDLYILDSSTGKVKLKRPDQMPKRIRNAMKKITNKKGEVSYEFTGKTEAARLLGAWNGWDAEKTINVKNDGDKIGELRIGFDENDKSDK*	hallmark_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0035	shell	direct	high	545	0.998	GCA_000012825.1_02932
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3615137	3615940	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	36230	37033	GCA_000012825_1_1_2898	GCA_000012825_1_1_2898	-	5163189	.	COG0451	Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]. 	MKMIVTGSEGFIGKALCQELKRRDVEVIGIDRKNGKDAASICDILKNGDIDCVFHLAAQTSVFNGNIPQIRKDNIDTFINVADACNRYHVKLVYASSSAAHPCNTTSMYGISKYFNEQYASFYCKDATGVRLHNVYGSLPRKRTLLWFLLNRGKVKLYNYGRNIRCFTYIDDAVQGLIYAYGSHKRLVNVANMQPITVKSFAEIVGSYKSIDIELVETTREHDNSEQVVDRYIFLVPLSYTSVENGIRKIFAGRRNQTPQNSKTEEG*	mmseqs_cdd	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0036	shell	direct	high	803	0.999	GCA_000012825.1_02933
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3615992	3616771	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	37085	37864	GCA_000012825_1_1_2899	GCA_000012825_1_1_2899	-	5163189	.	PFAM:PF12083.7	primase	MNRKERQEAKTGRYRELAEKAMKESKEAYSQSHKLVENIPMGQPVLIGHHSESTHRRILDRSWNTLGKAVKLSEKAEYFEQKAKAAENNASIYLGDDDAVERLEEKLATLGKKQETMKATNKILRSKKLSEIEKHDKLKELGYSENGITQLFIPDCFGEIGFPSYIITNNGSNIRRVKEQLERARKMKMTENKEYTINGVSLVENYSENRLQLFFPSIPDADIRNQLKKNGFKWSRCNECWQSYLNHRNIDSAKKIISE*	phrogs_hmm	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0037	shell	direct	high	779	0.999	GCA_000012825.1_02934
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3616813	3617385	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	37906	38478	GCA_000012825_1_1_2900	GCA_000012825_1_1_2900	-	5163189	.	PFAM:PF12002.7	ATPase	MTIRTVGGYDFFEVSSAMQKAIRRADAAVAGFFALELWTSGYRDYVWKRLFTISAEDCYGIVTGEIEALWQGHEVVNKKATEPKGRIFVSKAVLLLCECRKNRDADHLQNFIYDRKDVDIEKWIEDIRQSPIPIPPYTFDVHTRKGKKKGRTKAEFFREEYEALQPRVPGLFDDIVPQKQQDLFNETTAH*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0038	shell	direct	high	572	0.998	GCA_000012825.1_02935
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3617499	3618251	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	38592	39344	GCA_000012825_1_1_2901	GCA_000012825_1_1_2901	-	5163189	.	PFAM:PF10111.8	beta-glucosyl-HMC-alpha-glucosyltransferase	MPCKIVIPSHKRHDRVFAKKLVNDPIVCVAESQADLYREFNPDCEIVTHPDDIIGLIPKRNWMARYFGELFMLDDDVHACKTLYAEKGESGRVKDKDKITRIILSLHEMASLMDIHLFGFTSRISPVMYNETSFLSLSKMITGCSYGIIYNKNTWWNEELRLKEDFWISCYMKYKERRVLTDLRYNFEQKNTFVNAGGLASIRNQEEERRSILFIKKNFGDSILLKSATNNGKDKTKQLVQYNITCKFKY*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0039	shell	direct	high	752	0.999	GCA_000012825.1_02936
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3618220	3618873	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	39313	39966	GCA_000012825_1_1_2902	GCA_000012825_1_1_2902	-	5163189	.	CDD:cd16403	ParB-like-protein	MTKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRYIVVCGNLRLRACKDLGYKELPCKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKAELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDEKHELFIIISGNEVDSNWLRERLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0040	shell	direct	high	653	0.998	GCA_000012825.1_02937
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3618931	3619224	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	40024	40317	GCA_000012825_1_1_2903	GCA_000012825_1_1_2903	-	5163189	.	.	hypothetical protein	MITLNKLAKRCLETAMRKGKINNYTSRRAFILLISVKWRELLEASKYHSKHLPGYSEQEIAAAGIIISTITYLSRIGCANIEQLIKDTIEFNDNKDE*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0041	shell	direct	high	293	0.997	GCA_000012825.1_02938
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3619341	3620210	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	40434	41303	GCA_000012825_1_1_2904	GCA_000012825_1_1_2904	-	5163189	.	PDB:4BWV_A	PHOSPHOADENOSINE-PHOSPHOSULPHATE-REDUCTAS	MKIIVSFSGGKDSQACLIQAAKQYGADKIEAVFCDTGWEHPDTYQHITDVCKQMGVRITTLKPEFNFIEICKKYRRFPDPIRRFCTVDLKVKPMVDYILSLQESCIIIEGIRASESYKRSSMEEECMYFKSYFTPNEKGKFASYRKKDVKEWCGMYDASVLRSVFRWTAQEVIDCILNAGQKPNPLYSRGFSRVGCFPCVMSNLQNIKMLLNDKEMCSRLKNVEDEVRALRPGASFFKSGFIPKYACANRKYPTVEDVFWYVTDKNATLDAFEPEGGYACMSMFHGLCE*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0042	shell	direct	high	869	0.999	GCA_000012825.1_02939
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3620237	3621229	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	41330	42322	GCA_000012825_1_1_2905	GCA_000012825_1_1_2905	-	5163189	.	PFAM:PF13708.5	DNA-methyltransferase	MTSKKEILIETLHGSLEPFKQLPTLIDKETIYDETGHVDTEFLTAILEWMSVNASIAIGVQKSLHRLLGIEENKESKKGTADSGKNWSVEEILRHCTLENGLLKLPNVQFNKKSYAEAKKWIEEAGGSWQGGKAQGFTFPFNPERVFSILKEGKRCNLQQEYQFFETPAEVANWLVMLAGGIHENDTVLEPSAGRGALIKAIHRACPSVTVECYELMPENREFLYTLSNVILLDEDFTKDSVGSYTKIIANPPFSGNQDIEHVRLMYDRLEQGGTLAAITSQHWKFASEKKCIDFRNWLKEVHGEVFEISAGEFKESGTSISTMAVVIKK*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0043	shell	direct	high	992	0.999	GCA_000012825.1_02940
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3621186	3622292	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	42279	43385	GCA_000012825_1_1_2906	GCA_000012825_1_1_2906	-	5163189	.	PDB:1A0P_A	Recombinase-XerD	MNSDRQKILTDYISYLYTTRRTYDTIGKYIKYVTDFLESAEDVNRRSYLAYKRENANIGARYPLMSEAICDLLHHLKIGYNRREQKIKTLERLDAISEKNRKLLNDFIVWLTDNNDYSPHTVDIYYTSLKQYFEYVNEINMENCKRFIRTLEEKSLSPQTIRLRITALEKFSKWLKKPIELKRPKMKRKLDVNNVPTEEEYNRLLDFLKTKSNKDYYFFIKVLGTTGARLSEFQQFTWEDIISGEVTLRGKGNKYRRFFFQKQLQQEAKAYAKEHGKTGIFAVGRFGPITQRGFSQHLKAWGKHCGIDSRKMHAHAFRHFFAKMFLKKNKDVIQLADLLGHGSVDTTRIYLQKSYDEQKRDFNRNVTW*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0044	shell	direct	high	1106	0.999	GCA_000012825.1_02941
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3622310	3622789	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	43403	43882	GCA_000012825_1_1_2907	GCA_000012825_1_1_2907	-	5163189	.	.	hypothetical protein	MGLSIYALKLGDKISREEYDNTGNGWYVYQAHGMEPINHIPTVEEGCYKADVLYSDCDIFYSEYSIFRDIISHVVLKHDVKYVWNNVNNFIGKPFIEFLQTSDCEGAIDYTVAEKILHDFEKYESVIKPELNEYLCRFFDHYVCVLKKTVENKGIVYYS*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0045	shell	direct	high	479	0.998	GCA_000012825.1_02942
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3622813	3623484	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	43906	44577	GCA_000012825_1_1_2908	GCA_000012825_1_1_2908	-	5163189	.	.	hypothetical protein	MKTYNMQNTPKQWIDIEGYSKYETNGERVRNKTTCRIIKPVNGRYLLYDDDTKKQRAICVNRLMYAVSHHINPNKLGRVWVVSLNGRIELKTRYDFLELARSKIKPQMTSKEVVQCNLNALDWLQKVKLYYDTEDITDIALELSKYKKRICAYIVKRKFTNRPQMLEEVWSYIYEETLCTIAERKGNVLEPFSYMSRVAASYFSKIRRMKRTVFQFDEARDIY*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0046	shell	direct	high	671	0.999	GCA_000012825.1_02943
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3623481	3623672	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	44574	44765	GCA_000012825_1_1_2909	GCA_000012825_1_1_2909	-	5163189	.	.	hypothetical protein	MKNVTKIAKKSAGLSQKCSICPLMRRCTLEIHRACFDSFVEGFKKGVKAAEKEINKKFKIRKI*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0047	shell	direct	high	191	0.995	GCA_000012825.1_02944
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3623685	3624002	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	44778	45095	GCA_000012825_1_1_2910	GCA_000012825_1_1_2910	-	5163189	.	PFAM:PF05315.10	endonuclease-VII	MNIYHTEPRFDCEKFAPCGRISLHKCRKYKGRLDECRGCTLVHRKAKTVAGTEAGRKVCPHCGRSLPLHRFYNRTVRYGDKEYQCLTSWCKMCMSEVAAERNRNN*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0048	shell	direct	high	317	0.997	GCA_000012825.1_02945
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3623999	3625348	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	45092	46441	GCA_000012825_1_1_2911	GCA_000012825_1_1_2911	-	5163189	.	pfam14284	PcfJ-like protein. The PcfJ-like protein family includes the E. faecalis PcfJ protein, which is functionally uncharacterized. It is found in bacteria and viruses, and is typically between 159 and 170 amino acids in length. There is a conserved HCV sequence motif.	MKPRTKLEKRVTGLSGKLSAVTEVQKEWAKEHIFIHEAYRCKDELWCSECGGTWIDTSNSELRTTLLGDTTECPYCHHKLDVKVSRKRKVEEEKYMSILQTAGEFQIIRHILCCKYARKRNFDLNSRQDYIHYAFFEVVQEWITVEGKRTIMAKPMNMGSSGWIYSEPLSIKGEYGSYSWNYRGDLYAIWGWIYPRKKLLPELRKRGIGKRFPDVPPSKLIRDLLKGGNDAELCIKTGQTDMLKHMYKTGYYQLRYKPSFNICNRNRYIIRDASMWNDYISLLSYFHKDLHNAKYVCPKNLKAEHDRLLRKKNEIEARQRRERDRIKAIQKEKQLKEDIASFYNRMERFFGMEIKGDGIVIRPLESVTQFYKEGKAMHHCVYANRYYRRSECLIMTAIVGEKHVETIEVNLKSFQIVQSRAVCNGTSEYHDCIIRLVEKNMSLIKKLTA*	mmseqs_cdd	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0049	shell	direct	high	1349	0.999	GCA_000012825.1_02946
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3625351	3625770	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	46444	46863	GCA_000012825_1_1_2912	GCA_000012825_1_1_2912	-	5163189	.	pfam14058	PcfK-like protein. The PcfK-like protein family includes the Enterococcus faecalis PcfK protein, which is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 137 and 257 amino acids in length. There are two completely conserved residues (D and L) that may be functionally important.	MASNESFKQAIKAYLDKRAEEDSLFAPKYANEKKSIDECCSYIMGEARKRGNAVAISDEEVYGMAVHYYDEDDIKINRLPAGEKTSVSSSAKPVELTEEDKKAARDKAIARLAEEQYQTLRKKNVRKKADDNVQQMSLF*	mmseqs_cdd	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0050	shell	direct	high	419	0.998	GCA_000012825.1_02947
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3625776	3625940	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	46869	47033	GCA_000012825_1_1_2913	GCA_000012825_1_1_2913	-	5163189	.	.	hypothetical protein	MDIKNILINKISPSPINPRKSFDGATCPDEKSGDVININDAYKMKSMIPFLTNN*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0051	shell	direct	high	164	0.994	GCA_000012825.1_02948
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3626031	3626228	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	47124	47321	GCA_000012825_1_1_2914	GCA_000012825_1_1_2914	-	5163189	.	.	hypothetical protein	MEKIRIKWSSKGMKRRKEICERFGFSSYLTLNHESEVYVRAEDLPVFNETVRRGFLTVLPSGKKA*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0052	shell	direct	high	197	0.995	GCA_000012825.1_02949
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3626210	3626686	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	47303	47779	GCA_000012825_1_1_2915	GCA_000012825_1_1_2915	-	5163189	.	.	hypothetical protein	MADCPSLMQYDALYGHGSSEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVKAYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFRSERNYELDAINRKRIQNEIENRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0053	shell	direct	high	476	0.998	GCA_000012825.1_02950
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3626751	3627710	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	47844	48803	GCA_000012825_1_1_2916	GCA_000012825_1_1_2916	-	5163189	.	PFAM:PF14297.5	replisome-organizer	MARPNKMGLDYFPFDVDFFNDEKIVAISGEFGIKGEIVVIKLLCAIYRNGYFILWNDLLKFKLLRDLPGVSSELLDSIMNRLVLWGFFDKDLFDSMGVLTSAGIQKRYFKISKRRKSVDDFRYLLIKVSGCENKEVFSSDDGDVSSDIVNVCNGGVNVCNNPFTADINVCKNTTKKRKGNNKEISLSRDKENLPPPEILGKELDECYEELSRDMSWSEIVTMNTRNSGYKDFTVDMFKTYLKHFFEKLQNEGEVRKAPKDAKSHFARWLKIELEKQRNNGNNRSCYTSKQEANAYALSLLQQHKRDLEEGLADQMERPF*	phrogs_hmm	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0054	shell	direct	high	959	0.999	GCA_000012825.1_02951
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3627722	3628096	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	48815	49189	GCA_000012825_1_1_2917	GCA_000012825_1_1_2917	-	5163189	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MYIIRGQIPSKSNCYKIVSHFDPKTRKTHSSLAKQEVLKEYEKNFYIQCPERGRMIEGYFRLRAKVYYNSKRPDLDNSLKILLDCLQMTGTIKNDRQCVYIEIEKFVDRKEPRVEYEITPVEFG*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0055	shell	direct	high	374	0.997	GCA_000012825.1_02952
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3628099	3629256	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	49192	50349	GCA_000012825_1_1_2918	GCA_000012825_1_1_2918	-	5163189	.	PDB:1RIF_B	DNA-helicase	MKYQLRDYQKKASDAAVMCFKMKSDRNGLLVLPTGAGKSLIIADIAARLEEPLIVFQPNKEILEQNFAKLQTYGIWDCSIYSASVGRKEISRITFATIGSVIRHMKDFQHFKNILIDECHLVKPSDGMYKRFFEQAERRIVGLTATPYRLYSCMNGSMLKFLTRTRPRVFSQVLYYCQVSELLAKGFLSRLKYYDVTRIDLTKVRRNSSGADFDDASLSDEFRRVDLYGYLISIVKRLLHPKVGGARKGMLVFTRFTAEAEMLAREIPDSAVVSADTTKSDRERILAEFKAGKIKVVANVGVLTTGFDYPELDTVVLCRPTMSLSLYYQMVGRVIRPCPGKNGWVIDLCGNIRTFGKVEDLRVEQPEKDKWCIKSNGKQLTNVIL*	rep_hall_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0056	shell	direct	high	1157	0.999	GCA_000012825.1_02953
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3629253	3629528	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	50346	50621	GCA_000012825_1_1_2919	GCA_000012825_1_1_2919	-	5163189	.	PFAM:PF05766.11	NinG-recombination-protein	MSRLRHKRGRKSAYALSLTRNPYWEKVAREIRIRDGHKCRHCNALYPLEVHHMRYKVNGMSIVGHELEHLDCLVTLCASCHEKVHKGVIRL*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0057	shell	ambiguous	low	5	0.018	GCA_000012825.1_02953
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3629528	3630229	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	50621	51322	GCA_000012825_1_1_2920	GCA_000012825_1_1_2920	-	5163189	.	.	hypothetical protein	MITNDYEPEELQFVLPEVVKDTFPLELTFGNAENEKEIIKAVNEHFNVMFPENELAMRYMDNFEKDEIRKKYCELVEKELPSAEAELLSAKEEAKRLKADAEEALNSVSRQIKDYAAKVTEGTKEKKLPPTKTFRIALNGYYLFYSVINGRVLLVKAEKISSYDKSSLWAQEDRNRTAMMELFGLDFPAVEKPDDDDFDNEHDMIPDDSDDELGNEDDLNDALGCVDSDEEEN*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0058	shell	direct	high	701	0.999	GCA_000012825.1_02954
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3630253	3630705	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	51346	51798	GCA_000012825_1_1_2921	GCA_000012825_1_1_2921	-	5163189	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MEATIIKKDGKATLDKPFEFMLSLLRNGEYTLTIKRKTKPRTLNQNALMWQWFRCIGACFREYTGEEYWSTADGVQDIHDLYCKKFLSKQVTIGGKTETISRGTSKLNTLEMTNFMESVKADVNNDFGIILPLPTDKYYSAFVAEYEGRY*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0059	shell	direct	high	452	0.998	GCA_000012825.1_02955
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3630705	3631082	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	51798	52175	GCA_000012825_1_1_2922	GCA_000012825_1_1_2922	-	5163189	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MSVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWRGIAETAKKYLHKGDKVYVEGEIRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSDDELPC*	common_virus_hmm	common_virus	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0060	shell	direct	high	377	0.997	GCA_000012825.1_02956
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3631069	3631989	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	52162	53082	GCA_000012825_1_1_2923	GCA_000012825_1_1_2923	-	5163189	.	PFAM:PF10926.7	RecE-like-recombination-exonuclease	MIKLVKSPVVFNEENHTYFLGEKQLRGITGMISRQLFPDKYKGVPDHVMRRAADKGSRIHSQCEFVDSTGFEPESIEAENYLRERMNAGYDALANEYTVSDEEYFASNIDCVWEKEGEISLADIKTTYRIDKESLSWQLSIYAYLFERQNPGLKVRNLYGVWLRGDKSELIPVERRSDEEVMRLMECEVKGEKYLSTEIAPAGNLQLMTAAAVQMLIDIQEELDFAKEQSEQMKEGLKNAMIENGVNVWDAGRLRASVTPATTGKSFDTKAFQTDYPDLYSKYLKSVEKKASIRITIRKEKENECE*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0061	shell	direct	high	920	0.999	GCA_000012825.1_02957
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3631986	3632768	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	53079	53861	GCA_000012825_1_1_2924	GCA_000012825_1_1_2924	-	5163189	.	PFAM:PF06420.11	Erf-like-ssDNA-annealing-protein	MAAKKEEKAQGSQIRTLLASEIECRVGTMKQNGCSLLLYKDARVDMRMLDEVYGPNNWQRSHELINGNLFCTISVWDTDKGVWVNKQDVGTESNTEKEKGQASDAFKRAAFNWGIGRELYTAPFIWITLDSSEIYEKTGYNGSKSFGTNAKFNVQSIEYNQQREISKLVIVDGRGDVRYVFGEVKEKVKEQAPARTVPKNPAQAPAAFTGAQLKQAVDEMNACKSRAQVLSVWKRYTVMQNNNEFRNACIEMGKKYPEKK*	phrogs_hmm	nonviral_gene	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0062	shell	direct	high	782	0.999	GCA_000012825.1_02958
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3633964	3634143	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	55057	55236	GCA_000012825_1_1_2925	GCA_000012825_1_1_2925	-	5163189	.	.	hypothetical protein	MWISLLAVPTLMTFTLDNEGHITYLNVIGLVYSICTAFLWERMMPGYMVRYIKKLIRED*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0063	shell	direct	high	179	0.994	GCA_000012825.1_02960
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3634161	3634421	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	55254	55514	GCA_000012825_1_1_2926	GCA_000012825_1_1_2926	-	5163189	.	.	hypothetical protein	MLMDNTADILLDNIMRVMSGEYFGQTKAAAIVGGKKKLERLIESGKIEAVKPRNSQNGKWFCNAAQVLMHCRNMRKTGKTGKKKQE*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0064	shell	direct	high	260	0.996	GCA_000012825.1_02961
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3634459	3634668	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	55552	55761	GCA_000012825_1_1_2927	GCA_000012825_1_1_2927	-	5163189	.	.	hypothetical protein	MTETTEKKEIVPTLRKMAVGECEVFPLSQARSIGSTIYGANLAVERANGYKWSAKTNIEKKTVTVTRTQ*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0065	shell	direct	high	209	0.995	GCA_000012825.1_02962
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3634782	3635234	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	55875	56327	GCA_000012825_1_1_2928	GCA_000012825_1_1_2928	+	5163189	.	.	hypothetical protein	MEKYEIEECLHKVFKNSLDMKAQWIFKIQSTILMVSSTIFAVMVSFANVSNGSLCNRVLLASAILLNSVCILFASISLFENRAMSNALSRISYNKIVEYRMGILGIDSSSSKQYVERKPIFAFCEKASYVSFLLFVLALTACAIYKICYT*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0066	shell	direct	high	452	0.998	GCA_000012825.1_02963
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3635593	3635781	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	56686	56874	GCA_000012825_1_1_2929	GCA_000012825_1_1_2929	-	5163189	.	.	hypothetical protein	MEEELRKRIEELEAQNKELKFQSDQNAKFWTEAEKRCKVLEAALESIAITAGILKDSLVQKP*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0067	shell	direct	high	188	0.995	GCA_000012825.1_02964
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3635812	3636207	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	56905	57300	GCA_000012825_1_1_2930	GCA_000012825_1_1_2930	-	5163189	.	.	hypothetical protein	MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRKAIMQRAWAFMKVYKGYTLKSAIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANPTGDMANGYATR*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0068	shell	direct	high	395	0.997	GCA_000012825.1_02965
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3636240	3636638	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	57333	57731	GCA_000012825_1_1_2931	GCA_000012825_1_1_2931	+	5163189	.	PFAM:PF10078.8	transcriptional-regulator	MVERIKSIINYYKLTDRAFAIKCNIKQNTLSRQLGGTSEVSLSTIDAILSTFEDISSEWLLRGKGTMLLSDVEHERNIIPDTNMERMNRLVDTIATLQGALNEKDKTIKLLEEKVKRLETELAMVKNEWKVG*	phrogs_hmm	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0069	shell	direct	high	398	0.997	GCA_000012825.1_02966
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3636688	3637224	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	57781	58317	GCA_000012825_1_1_2932	GCA_000012825_1_1_2932	+	5163189	.	.	hypothetical protein	MDEQLNLLSIKEGLPGMHKDLCSHYYSACMTTLHRAGHIVNGTILHLDGNRKGSIPLYWEDYFDETIDRSWKEINYCTDHAAVCMSCVLAIHETEFTIVERSCKGDGFDYWLGYKEDHLFNHAARLEISGILKESRTNTIEKRLKDKMKQTEQSDETCLPAYISIIEFGKPKALFIKK*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0070	shell	direct	high	536	0.998	GCA_000012825.1_02967
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	CDS	3637235	3638356	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	58328	59449	GCA_000012825_1_1_2933	GCA_000012825_1_1_2933	+	5163189	.	.	hypothetical protein	MDIRELHNEAMYKAELGDIQKYQGNSEYAIDLYAQAYELEKNAACIALEHHMGEPTISILLKSAASLAMRCSLNRDAEKLIGLALSGEPPRDIAEELRNMLETVNFHRHLDLRGVILQEDEVQLVIAGKGVGYGYAKSDDVLDRVDTFQKLAIRTIERKAGKSFRKAGKIPNELKDACQPFITVPSAASMAFRMKFGSVENITLSGFGTFENVIEDINDNIELIAKGDIESLKQNISDESYFNNFIGLTKQLAPDGDSVNLFGITSILKGKERRVELTSPRTEISLFIKNAGVVVGTNESDKLSVNADKNIIGVLSAADNLGKVRITTANGEKYIITVPDGLSDIVKTYWEEEVSVKYVIEKRRKILVDIDGI*	.	hypothetical_protein	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_CDS_0071	shell	direct	high	1121	0.999	GCA_000012825.1_02968
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	tRNA	3635251	3635320	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	56344	56413	tRNA-Undet	tRNA-Undet	-	5163189	.	tRNAscan-SE score: 52.3	Undet	NA	tRNAscan-SE	.	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	tRNA	3633853	3633923	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	54946	55016	tRNA-Undet	tRNA-Undet	-	5163189	.	tRNAscan-SE score: 56.0	Undet	NA	tRNAscan-SE	.	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	tRNA	3633702	3633773	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	54795	54866	tRNA-Gly	tRNA-Gly	-	5163189	.	tRNAscan-SE score: 79.8	Gly	NA	tRNAscan-SE	.	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote	cenote	tRNA	3633139	3633242	GCA_000012825.1	CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825.1_CP000139.1	GCA_000012825.1|CP000139.1	GCA_000012825_1_1	GCA_000012825_1_1@C268	54232	54335	tRNA-Undet	tRNA-Undet	-	5163189	.	tRNAscan-SE score: 31.4	Undet	NA	tRNAscan-SE	.	C268	59449	3578908	3638357	GCA_000012825.1|CP000139.1@region_3578909_3638357@tool_cenote_tRNA_0001	.	.	.	.	.	.