core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	98669	98914	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	1	246	GCA_000016485_1_1_104	GCA_000016485_1_1_104	-	1887192	.	.	hypothetical protein	MKKTTALFLLIFSLIACQSLELSPNSDLPFDPNIQHGKLSNGLQYFVLKNTEPKERVYIRLVINAGSMHEDDDQKRHCPFS*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0001	persistent	direct	high	245	0.996	GCA_000016485.1_00101
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	99018	100895	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	350	2227	GCA_000016485_1_1_105	GCA_000016485_1_1_105	-	1887192	.	6OFR_A	Putative TonB-dependent outer membrane receptor	MGGAVIAKTKQYSGTDSIKLKYRTTNSSWAKMEAGDSVQKILKQVRPDDSGAAELQPKYNKQTFNILAEKRLNDNLGMVFGYSRRTSSIEQNRLIGYKTATTEAQLDKQNHQRLSDNLLLNFNWTPQEKERIELGLRYSNYKELKYFKENIGNNVSDYHQALGTTLAWVHSFDSGVWTNTLAYDRFKDKRKSSSNNVETTSVSDDDGELLYNFEKGGYGNSRLTQDNLHFSTEYVMEPFNLGSTEHSISIGSIYQATKYQFYRPQDVHQKVTLIIGNLRTETNSTTSKGRVKTTYQNIVAYAEDLIKWNKFELRPGIRIERDDYLKNNNIAPRFVARYHPWDDTGFTLGLNRYYGRSFASLKLANRILKINDDSTRQHQNFSSLKTPYADELSLSFDQNMGNLALKLGYIHRDNKNRIILKRDTVNSMNKSSYINGRPFGVDIYTFQLNNIEPWKLGKTYWTTSLGFDWLNTKRADGEEFDLNKLVSLDGKLMTYREMLRQVNSNTEDWIARLGIDMTIPDYDITWSNKVYMKAPIRSYEELDSDNNNDDISRFRSYHYGRHTQWDSSIRWQPTIRGKHSVYLQVDILNVLNKTRKNKVTTISTNDEYGVYTPGREFWLEIGYQF*	hhsuite_tools	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0002	persistent	direct	high	1877	0.999	GCA_000016485.1_00102
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	100841	101437	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	2173	2769	GCA_000016485_1_1_106	GCA_000016485_1_1_106	-	1887192	.	6FOK_A	metalloprotein, TonB dependent transporter, outer	MYQKKPLMLLLCSTFASPFIMGQTAETTNNQQPTTNNQQPTTNKNILPEIVVYGDNNKSLSSVKTLSSDEISKTPTSNGNITDYLRSNPHIRYENSDQNGFQRGEIKPENISINGADPNQTAYFVDNVNINNDLAIDNSIFDGAMQVVPGISHTQAYFFDATMLSKVEVQDSNISASLGGLWVVPLLLKRNNIAALIA*	hhsuite_tools	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0003	persistent	direct	high	596	0.998	GCA_000016485.1_00103
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	101600	101809	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	2932	3141	GCA_000016485_1_1_107	GCA_000016485_1_1_107	-	1887192	.	TIGR00638	molybdenum-pterin binding domain. This model describes a multigene family of molybdenum-pterin binding proteins of about 70 amino acids in Clostridium pasteurianum, as a tandemly-repeated domain C-terminal to an unrelated domain in ModE, a molybdate transport gene repressor of E. coli, and in single or tandemly paired domains in several related proteins. [Transport and binding proteins, Anions]	MKISARNQLKGKVVSIENGSVNAIVHIDIGGGNVLSSTVSLAAVKELNLEVGKEAYAIIKATSVMVGVE*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0004	persistent	direct	high	209	0.995	GCA_000016485.1_00104
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	101927	102256	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	3259	3588	GCA_000016485_1_1_108	GCA_000016485_1_1_108	-	1887192	.	TIGR03342	sulfur relay protein, TusE/DsrC/DsvC family. Members of this protein family may be described as TusE, a partner to TusBCD in a sulfur relay system for 2-thiouridine biosynthesis, a tRNA base modification process. Other members are DsrC, a functionally similar protein in species where the sulfur relay system exists primarily for sulfur metabolism rather than tRNA base modification. Some members of this family are known explicitly as the gamma subunit of sulfite reductases.	MLNINEMEVETDKDGYLLNSQQWNEDVAQAIAQLENIELTDAHWEVIYFVRDFYQEYNTSPAIRMLVKAMAEKLGADKGNSRYLQRLFPEGPAKQATKLAGLPKPAKCL*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0005	persistent	direct	high	329	0.997	GCA_000016485.1_00105
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	102258	102707	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	3590	4039	GCA_000016485_1_1_109	GCA_000016485_1_1_109	-	1887192	.	PRK10696	tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	MFYGGKMKSMPPKLISDDGKQIVIRPLTYCKEKDIEKYAIAKEFPIIPCNLCGSQPNLQRQVVKEMLNTWDRQYPGRLETMFSAMQNITLSHMCDPKLFDFKGIKHGQLIDGIEGDTAFDEEQITPMQFEDEDQTDFSNNEMINFKEVN*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0006	persistent	direct	moderate	432	0.96	GCA_000016485.1_00106
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	102710	103198	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	4042	4530	GCA_000016485_1_1_110	GCA_000016485_1_1_110	-	1887192	.	PRK10696	tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	MSELTQLAQQEKKQSYNFNKLQKRLRRNVGNAIADFGMIEDGDKVMVCLSGGKDSYTLLDILLNLQQSAPIKFDIVAVNLDQKQPGFPEHVLPEYLESIRVDYKIVQENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLATLF*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0007	persistent	direct	high	488	0.998	GCA_000016485.1_00107
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	103347	104681	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	4679	6013	GCA_000016485_1_1_111	GCA_000016485_1_1_111	+	1887192	.	PRK05260	chromosome partition protein MukF. 	MIETSQTIPELVSWAKDREFSLNLPTERLVFLLAIAIYNNERLDGEMLEADLVDIFRHTMNAFEQSTDAIATRANNAINELVKQRLLNRFSSEFTEGLAIYRLTPLGVGVSDYYIRQREFSALRLSVQLSIVADEIQRASDSAEEGVENNESEHYWRRNVFAPLKYSVAEIFDSIDLSQRIMDENQQSIKNEIAELLTKDWQAAISSCERLLDETSGNLRELQDTLNAAGDKLQAQLLRIQDCVIGRDDLYFIDQLITDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFSQRLRNSIHHYFDHPWFLWTAQAERLVDLRDEEMVLREDDALGELPEELQYESLSDLHDQIVEHMQGLLIAYRENNRPIDLSLVLKEQLENYPLSRHFDVARIIVDQAVRLGMANDDLSGIYPDWQAINKRGAEVQAHVIDKY*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0008	persistent	direct	high	1334	0.999	GCA_000016485.1_00108
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	104694	105650	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	6026	6982	GCA_000016485_1_1_112	GCA_000016485_1_1_112	+	1887192	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MKEYKTIDLFAGIGGIRLGFEAFGCKNVFSSEWDKYAQSMYEVNFGEKPFGDINDISPSDIPDHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIEAILKAKKPKAFLLENVKRLTTHDNGNTFKVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVGFLDKLHFEFPKPIGKYEELSNILESDDVVPNNYFLSDELKRKRLSSITKDVPYPSIWHENISGNVSALPYSCALRAGGSYNYLVVNGVRRLTGREMLRLQGFPDTFEINIPYSQVRKVAGNSVSVPVIRAIAGSMINSLNMAMPKINQAIQLSLLD*	common_virus_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0009	shell	direct	high	956	0.999	GCA_000016485.1_00109
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	105653	105982	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	6985	7314	GCA_000016485_1_1_113	GCA_000016485_1_1_113	+	1887192	.	pfam09554	HaeII restriction endonuclease. This family includes the HaeII (recognizes and cleaves RGCGC^Y) restriction endonuclease.	MNDIQVAKESLDKIIKKARVHLYKPIQIAEILYQDRVNKNINLLDKETYRNISKKWRDVICIRFLGRVSTSSAKYQDDLFNDNAMPPKHLNILGEMNRKTKWWSRKLYL*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0010	shell	direct	high	329	0.997	GCA_000016485.1_00110
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	106008	106712	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	7340	8044	GCA_000016485_1_1_114	GCA_000016485_1_1_114	+	1887192	.	pfam09554	HaeII restriction endonuclease. This family includes the HaeII (recognizes and cleaves RGCGC^Y) restriction endonuclease.	MSSALEYSYSRTPDNFHLSEFLALFWLEPGLKRSIDKVYEIVVYALFSSLIEALGVKVKIDLDLSNIDLLKEFEDFTRQIISLDSENTSLELNAKINRVGVTNASDRGLDMWANFGMAIQIKHLSLTEELAENIVSSVSSDRIVIVCKESEEKLILSLLNQIGWRSKIQSIITEADLIKWYDKALRGKSAYLVGSKILEHIRNEISLEFPATDIVDFNHFFHEREYNKALDIEK*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0011	shell	direct	high	704	0.999	GCA_000016485.1_00111
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	106716	106871	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	8048	8203	GCA_000016485_1_1_115	GCA_000016485_1_1_115	+	1887192	.	COG3095	Chromosome condensin MukBEF, MukE localization factor [Cell cycle control, cell division, chromosome partitioning]. 	MTDNLQDVISPKLAVAIANPIFPAVDSLLRSGRHISTEHLDNHAFFNGFPK*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0012	persistent	direct	high	155	0.994	GCA_000016485.1_00112
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	106843	107451	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	8175	8783	GCA_000016485_1_1_116	GCA_000016485_1_1_116	+	1887192	.	pfam04288	MukE-like family. Bacterial protein involved in chromosome partitioning, MukE	MPFLMDFQNELDGFYRRYNVELIRAPEGFFYLRPKATTLIARSVLSELEMLVGKVLCYLYLSPERLAQQGIFSTQEVYDELLNLADEGKLLKAVNQRSSGSDLDKQKLAEKVRAAIGRLRRLGMIQTVGEQNSGKFTISESVFRFGAEVRSGDDPLEAQARLIRDGEAATPESLALEKQAQLMENDTKSADEIDEEFDGEQE*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0013	persistent	direct	high	608	0.998	GCA_000016485.1_00113
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	107451	111983	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	8783	13315	GCA_000016485_1_1_117	GCA_000016485_1_1_117	+	1887192	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MSDVFELENEIELESDEVIMENENVEEIVDAPIPFSMTTNNGVERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLHFRNTTEAGSTGGSRDKGLHGKLRPGVCYAVLDTINSRHQRILVGVRLQQIAGRDKKVDLKTFSIQGVELSQNPTALFTETVGERQARVLNLNELKDKIENIGAQFKQYHSITDYHGMMFDLGIIPKRLRSASDRSKFYKLIEASLYGGISSAITRSLRDYLLPENLGVRKAFQDMESALRENRMTLEAIKVTQSDRDLFKHLITETTNYVASDYMRNANERRGNIEAALESRREWYKAKAEQNLSQHRLVDLSREAAELAENERTLEVDHQSAVDHLNLVLNALRHQEKITRYQEDIAELTERLEEQKMVVEDANDALEESQAQFEQTEIEIDAVRAQLADYQKALDAQQTRALQYQQAIAALEKAKTLCGLADLSVKNVEDYHAEFEAHAESLTETVLELEHKMSISEAAKSQFDKAYQLVCKIAGEMPRSAAWESAKELLREYPSQKLQAQQTPQLRTKLHELEQRYAQQQSAVKLLNDFNQRTNLSLQTAEELEDYHAEQEALIEDISAGLSEQVENRSTLRQKRENLTALYDENARKAPAWLTAQAALERLEQQSGETFEHSQDVMNFMQSQLVKERELTMQRDQLEQKRLQLDEQISRLSQPDGSEDPRLNMLAERFGGVLLSELYDDVTIEDAPYFSALYGPSRHAIVVRDLNAVREQLAQLEDCPDDLYLIEGDPTAFDDSVLSAQELELGVVVQVSDRELRYSRFPEIPLFGSAAREKRLEELQIERDEVAEQHAQIAFDVQKYQRLHEHFSQFVGLHLALAFQPNPEALMSEINRERNEIDRELNQFNNGEQQLRIQLDNAKEKLQLLNKLIPQLNVLADEDLIDRIEECREQLDIAEQDEYFIRQYGVTLSQLEPIANSLQSDPENYEGLKNELTQAIERQKQVQQRVFALADVVQRKPHFGYEDAGQAETSELNEKLRQRLEQMQAQRDTQREQVRQKQSQFAEYNRVLIQLQSSYDSKYQLLNELIGEISDLGVRADDGAEERARIRRDELHQQLSTSRQRRSYVEKQLTLIESEADNLNRLIRKTERDYKTQRELVVAAKVSWCVVLRLSRNSDMEKRLNRRELAYLSADELRSMSDKALGALRTAVADNEYLRDSLRVSEDSRKPENKVRFFIAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTAELTGREKKLAISSESVANIMRKTIQREQNRIRMLNQGLQNIAFGQVKSVRLVVNIRDTHAMLLDALSGQQNEYQDLFNDNRITFSEAMAKLYQRINPHIDMGQRTAQTIGEELLDYRNYLELEVEVFRGADGWLRAESGALSTGEAIGTGMSILLMVVQSWEEESRRIRGKDIVPCRLLFLDEAARLDGKSISTLFELCERLDMQLLIAAPENISPEKGTTYKLVRKIAGNQEHVHVVGLRGFGATE*	common_virus_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0014	persistent	direct	high	4532	1.0	GCA_000016485.1_00114
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	112053	112961	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	13385	14293	GCA_000016485_1_1_118	GCA_000016485_1_1_118	+	1887192	.	COG3586	Predicted transport protein [Function unknown]. 	MKIFTSKKGQLSQLKQQKFKLEKDIQRLFEENLTLLSGYIFIRSEFSIKNSRIDTLAFDPETQAFVIIEYKRQQNSSVVDQGISYLNLMLEYKADFIVEYNEKQKFPLKRNDVDWSQSKVIFVSPAFNDFQIQATNFKDLPIELWEVNRFDNDIITLNIINKSKSAPNIKAVSNEKREEFSILKEIKVYQESDHLSDKSDFIQELYEDFKQGILNLDPDIEINTRKLYIAFKKDRNIADIRIQQKNLKIWINLPYGELDDPKNLAKNVSNTGHWGNGDYEITIESTQYLEYIMSLIKQAIKD*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0015	persistent	direct	high	908	0.999	GCA_000016485.1_00115
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	112965	113126	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	14297	14458	GCA_000016485_1_1_119	GCA_000016485_1_1_119	+	1887192	.	.	hypothetical protein	MHNLIFAILCSVAVSVLLKIARKKISLLNKLSHSTTLQPSLSVISYLNLILKV*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	113186	113839	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	14518	15171	GCA_000016485_1_1_120	GCA_000016485_1_1_120	+	1887192	.	PF06027.12	Solute carrier family 35	MLPSVFIIMSKAVEFAGIIRSDAAQRLSLFLPILAAFLIFHETLSQSKIIGVVLAFIGLFCLLTKPTQGQSAVNFKGVLGLIGVWFGYGVIDILFKQVAKSGGAFPATLFISFSLAACVMFIYLFLKRAQWTSSSVIGGIVLGVLNFFNILFYIKAHQSFAGNPTLVFAGMNIGVICLGTITGALVFKERISKLNWLGIIFSLSAIFCLYYLDKIIA*	hhsuite_tools	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0017	persistent	direct	high	653	0.998	GCA_000016485.1_00116
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	113852	115273	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	15184	16605	GCA_000016485_1_1_121	GCA_000016485_1_1_121	+	1887192	.	PRK11779	exonuclease I; Provisional	MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEFSANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGTMTPLVHVSGMLGNYRGNCTWVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0018	persistent	direct	high	1421	0.999	GCA_000016485.1_00117
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	115681	115968	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	17013	17300	GCA_000016485_1_1_122	GCA_000016485_1_1_122	+	1887192	.	.	hypothetical protein	MSNITIQHITPRHFYEAVKLLKQTEHNIRFSYDTVEIRFVFDRLETAEQTQARFEQMEHLGEFLKELTNSSVPIDLDEFIKNYRYQPRNKFFNTR*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0019	cloud	direct	high	287	0.997	GCA_000016485.1_00118
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	115955	116149	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	17287	17481	GCA_000016485_1_1_123	GCA_000016485_1_1_123	-	1887192	.	COG5475	Uncharacterized conserved protein YodC, DUF2158 family [Function unknown]. 	MEEIKVGTIVQLKSGSPLMTVVLVRDNEQVVCKWFEQNKSNEDTFPKAALDIYHENSGSFVTEY*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0020	cloud	direct	high	194	0.995	GCA_000016485.1_00119
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	116338	116799	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	17670	18131	GCA_000016485_1_1_124	GCA_000016485_1_1_124	-	1887192	.	.	hypothetical protein	MRYFRLSYDTRQLSKKNIELINQTVIKKLGEEGFFVPEESQITLDFPIPEALHQEQNIFFSIPNNLCNEEKELFFRKMAREYFELISSNVGISGMRTYDLYPDEDSYQRQLKLIIDNYLIATADYEDKDYIKSILDSNEFLKNWLEDTGRLPI*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0021	cloud	direct	high	461	0.998	GCA_000016485.1_00120
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	116796	116981	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	18128	18313	GCA_000016485_1_1_125	GCA_000016485_1_1_125	-	1887192	.	.	hypothetical protein	MPTKHIDDLTWKKVQEEHVKAVVLTKMSIKDTEILKILIKKGLDNVTDDDYINFANKKESK*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0022	cloud	direct	high	185	0.995	GCA_000016485.1_00121
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	117134	118282	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	18466	19614	GCA_000016485_1_1_126	GCA_000016485_1_1_126	+	1887192	.	PFAM:PF05144.13	Phage-replication-protein	MNLFIDWLEIEQDFGIEIPEELLLSIYGQYLMVVTEGGEIQKSRVTGKYHHKGSYCDEVSIKISGSVIRMAGNPSRWGRVENVFGFDTVDSCVSCFNSILSSLKLPIFTRCTEIFYRQGEDGSKVSKFSNGAIIKRLDITTNKAVGKGNERTFLKALSQMRYRNSIGRLHTNGCTTDWLSEKGNANLIYPSCYIKHEEMRVHSYDKIKRKFGEESKEFRYYRSVYEYCRENGVVRFEQKLKSRYLQRENLCYWGISDFSVLENLQKEFTDMYKKLNVSQYDLETIAEQLVSQGIVDTLRKATTSAYYAMLWASGKELGLKSRQYETHRARLRKIGIDIANPCDVEKFQAVRVIACENIMVRPFKAPDFYQFPSNAPQLRFVV*	rep_hall_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0023	cloud	direct	high	1148	0.999	GCA_000016485.1_00122
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	118322	118648	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	19654	19980	GCA_000016485_1_1_127	GCA_000016485_1_1_127	+	1887192	.	pfam17426	Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303	MRTGFYIVGILKGYKSSSFTNRETGEVKDRHNMGVQLQEPDGYGGYNTSIQEIKIDDRSMNDALRNTINRLKDKTVMVLVYPREWAMENGRKGITYNFDESSIIEELK*	mmseqs_cdd	nonviral_gene	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0024	cloud	direct	high	326	0.997	GCA_000016485.1_00123
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	118648	118737	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	19980	20069	GCA_000016485_1_1_128	GCA_000016485_1_1_128	+	1887192	.	.	hypothetical protein	MREFIEMVGASFIGCSLALTIFYLLVFHL*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0025	cloud	direct	moderate	89	0.989	GCA_000016485.1_00124
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	118734	119006	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	20066	20338	GCA_000016485_1_1_129	GCA_000016485_1_1_129	+	1887192	.	.	hypothetical protein	MSNEIEITTKFCHPYMNFGGDGCNQIVLKIPQTEAEKLVESAQVYGTSNKGGAQEFQYYPEIFAASFSITLGFWLIAKFGGLILETIKKA*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0026	cloud	direct	high	272	0.996	GCA_000016485.1_00125
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	119025	119255	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	20357	20587	GCA_000016485_1_1_130	GCA_000016485_1_1_130	+	1887192	.	CDD:PHA00979	putative-major-coat-protein	MFKFLKSATTKVALGAVALVPALAMAEQQAVDYTALTSKIDFSGAITAVLSVIGIIIGALVAWKGGQWIIKAVRGA*	hallmark_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0027	cloud	direct	high	230	0.996	GCA_000016485.1_00126
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	119339	120706	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	20671	22038	GCA_000016485_1_1_131	GCA_000016485_1_1_131	+	1887192	.	.	hypothetical protein	MRLGSYSWHRWVIFPFIFLSFSAFADSTITKDNIAKILTKDLLERSYSTTKNLPMTLDDAQKLQRANALRKIAQKSTKMAEILGKRNPWGAVMVAAGAGLLVDGAIDKAFEMFTDAEKDEKGYFVWVVNPTTNLKEKYYLEGEKPTKIAPIFVYKTKTEVFIFWKSLAYPECGNENIDDVIECAVENYANSGFLEMRNPTIKNKNLISQSETNRIYQVTFDYEFGENKHEESVSTFIFNGEKQEREVTKKYELGTPDALIKNLPSDKPLVMGESNIERLLKELVTLQSKEFDSDERRIIDFAFSHVNAMQSDILKGREYLTKEDLLNFNYSPDMFDDKKTQKPINPSRPSNPGGSSNNTHSNKHDEDNYGDPNYPNLEPPTAHQILEPFKKFFPEFQNLTIQGKAAQCPTWSFNALNRTYTIDSHCPILEQNRAILGALFTLIWSIIAIRKLLSA*	.	hypothetical_protein	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0028	cloud	direct	high	1367	0.999	GCA_000016485.1_00127
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	120715	121011	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	22047	22343	GCA_000016485_1_1_132	GCA_000016485_1_1_132	+	1887192	.	CDD:PHA01081	putative-minor-coat-protein	MGGLILRLFSGFLGFVFKGIVAKFFVFFAVFFVTTEFIPVVIELFIPENLRVNFQTLFNNLPSDMWYFLELLKVPFGVTLFISAMLARFIIRRIPVIG*	hallmark_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0029	cloud	direct	high	296	0.997	GCA_000016485.1_00128
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	121015	122055	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	22347	23387	GCA_000016485_1_1_133	GCA_000016485_1_1_133	+	1887192	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAILAYVGIPGSGKSYEVVSSVILEHFKKGRRIVSNIVGLTQSKLFDYCVSKGANPEDLGEFISVSDEQCQQADFFPYKGSENSICRAGDLICLDEVWRIFPSEKIHENHRSFLAEHRHFTNPDTGECCDLVVINQSVAQLPRFIKDRIETTYRMSKLSALGMSNRYRVDVFTGAKTTKSNKTLQLQRKYNKDIFPLYQSYDGINGKENTVDGRGNIFKSFQFKAMVVLMILLISAGFYGFNSFFNMGKVDKDKASVKANSSAEMAESLPIEKRLIQPVVNYTPPRISEKWRVTGELSKDGESFVILSDAVGRLRFEPRSSFSYSGRMLEGLIDGEVVNYYSGAMQ*	hallmark_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0030	cloud	direct	high	1040	0.999	GCA_000016485.1_00129
GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote	cenote	CDS	122052	123185	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C7	23384	24517	GCA_000016485_1_1_134	GCA_000016485_1_1_134	+	1887192	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLSFHTTEEQDFNEFLTRYFENINIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYLSQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVPSREVVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKSGSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRSKSNSKTDIVILLQVKEI*	common_virus_hmm	common_virus	C7	24517	98669	123186	GCA_000016485.1|CP000672.1@region_98670_123186@tool_cenote_CDS_0031	cloud	direct	high	1133	0.999	GCA_000016485.1_00130
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	145208	146227	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	1	1020	GCA_000016485_1_1_158	GCA_000016485_1_1_158	-	1887192	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHDFTIQCLKLAGNPLFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAIDGFGALGFGFLEVGTVTPVAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELVQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0001	persistent	direct	high	1019	0.999	GCA_000016485.1_00154
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	146690	147355	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	1483	2148	GCA_000016485_1_1_159	GCA_000016485_1_1_159	-	1887192	.	PDB:2FKK_A	Baseplate-protein-	MALVNKPDESIFASSAKQGEVDNFPDLLRGWGITFDQTQGIPPMEWFNFLFKRLDEKHTYLMQRGLPEWSATQDYTKGSCVQFDGISYRALKNSKNNSPNESDSQYWVRWGFALSEITRATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTAESKVGLRGNESIQGTKSFESKIIGFRGIGVADSQTYANANHLLNMGANDGDGWIEYKKN*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0002	cloud	direct	high	665	0.998	GCA_000016485.1_00155
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	147365	147820	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	2158	2613	GCA_000016485_1_1_160	GCA_000016485_1_1_160	-	1887192	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINGYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPNAITSDFKKFAINHLDILPRQAGVQYLFNLI*	mmseqs_cdd	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0003	shell	direct	high	455	0.998	GCA_000016485.1_00156
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	147833	148933	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	2626	3726	GCA_000016485_1_1_161	GCA_000016485_1_1_161	-	1887192	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKIGVFDYLATELGLKEDGIKKVARTEKSLFNDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDEQAIKTVQEHGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILNAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGEQPTELKEKQSEPENKKEDDVEKEELEKRLKAKDEEIQALKEAQAKRDAEVKQAAVLADAKTAFKEVNFADNATVREIQESTVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAEPKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0004	shell	direct	high	1100	0.999	GCA_000016485.1_00157
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	149074	150258	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	3867	5051	GCA_000016485_1_1_162	GCA_000016485_1_1_162	-	1887192	.	PFAM:PF06152.10	minor-capsid-protein	MMTNDVERALQQPQGSFFMDDAKGFQAISARALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRAQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKRAMFIARDQSSKLNAALTQVRHEEVGIKKYMWSASLDERVRESYAEKDGQIFEYANPPADTGHPGHDVNCRCVQIPVLDDVVNLKSEETELSYQAAEPNKTGKMDLDELFESSIGGGGNKSFSNFGGVNSELIALAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSSA*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0005	shell	direct	high	1184	0.999	GCA_000016485.1_00158
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	150354	151310	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	5147	6103	GCA_000016485_1_1_163	GCA_000016485_1_1_163	-	1887192	.	PDB:8HDS_J	Portal-Protein	MGLLLVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDFEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELAQKF*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0006	shell	direct	high	956	0.999	GCA_000016485.1_00159
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	151402	151617	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	6195	6410	GCA_000016485_1_1_164	GCA_000016485_1_1_164	-	1887192	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKI*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0007	shell	direct	high	215	0.995	GCA_000016485.1_00160
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	151862	152962	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	6655	7755	GCA_000016485_1_1_165	GCA_000016485_1_1_165	-	1887192	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFKPLFESIWRFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLRAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIEYAVDAHLKLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTY*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0008	shell	direct	high	1100	0.999	GCA_000016485.1_00161
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	152949	153464	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	7742	8257	GCA_000016485_1_1_166	GCA_000016485_1_1_166	-	1887192	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_000016485.1_00162
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	153509	153787	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	8302	8580	GCA_000016485_1_1_167	GCA_000016485_1_1_167	+	1887192	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0010	shell	direct	high	278	0.996	GCA_000016485.1_00163
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	153789	154070	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	8582	8863	GCA_000016485_1_1_168	GCA_000016485_1_1_168	-	1887192	.	PDB:5CYB_A	Lipoprotein	MLNQLKQSLRLNLALTLVCLSLFLTDCTKKITTKAEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0011	cloud	direct	high	281	0.996	GCA_000016485.1_00164
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	154156	154305	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	8949	9098	GCA_000016485_1_1_169	GCA_000016485_1_1_169	-	1887192	.	PFAM:PF10828.7	Rz-like-spanin	MTKYIYIALAGVVVVLIGVLRYQSGVIDELEIMTKQQENTIQQQEDANK*	phrogs_hmm	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0012	shell	ambiguous	low	7	0.047	GCA_000016485.1_00165
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	154298	154900	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	9091	9693	GCA_000016485_1_1_170	GCA_000016485_1_1_170	-	1887192	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPYAVKGVYQAISAQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0013	shell	direct	high	602	0.998	GCA_000016485.1_00165
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	154869	155225	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	9662	10018	GCA_000016485_1_1_171	GCA_000016485_1_1_171	-	1887192	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0014	shell	direct	high	356	0.997	GCA_000016485.1_00166
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	155448	156302	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	10241	11095	GCA_000016485_1_1_172	GCA_000016485_1_1_172	-	1887192	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTTQTKQLSTFNFENHSIRALVINNQPWFVAKDLCDTLGITNPSKAILNLDDDEKMISTDSNLKLGSAGNGAQSLALVSESGMYTLILRCRDAVKKGSIPHRFRKWVTSEVLPTIRKTGKYQLQPQQKTTVDDRAGLRNAISFLVNKKGLIYSEVYQLIHQQFGVEHIDELSQEQLSQAIKYIHFLTLNLDGLFKKGEEVIIPEYIFDAIMKHAKLAQKLAEKVICYQEKQFALLGIARHYRSNELTRRANSLLSEFSYFLHEGEKLLAQQIENPSLTQIKNIF*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0015	cloud	direct	high	854	0.999	GCA_000016485.1_00167
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	156615	157073	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	11408	11866	GCA_000016485_1_1_173	GCA_000016485_1_1_173	-	1887192	.	PF04352.13	ProQ/FINO family	MGRRDNIKANLAKLKERFPNVFFDTKPLVPTIIDDMLAVLGDDELSKVVRGAMRYYLDSPSYLKRFVRRKWIRDVNGSKVRLITAEEKQLARERLNQINEHNSKANAEYRFAIALARETNIEYKKVELLEQKNPEKSKVVVIHRRTPKIKSE*	hhsuite_tools	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0016	cloud	direct	high	458	0.998	GCA_000016485.1_00169
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	157183	157722	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	11976	12515	GCA_000016485_1_1_174	GCA_000016485_1_1_174	-	1887192	.	.	hypothetical protein	MKKLLLIGVMVAFLSGCAVQQQKKESLSEKWAKQDELALKGKITDKTDKFTGEREIKWQVSGIVSSQYTQTIVPEKFSVIKNKKQYNELLITKKGRTPVKCDETHWLVDGKKFNLKLYNSGLTATRDFYLQLNIYRPTNEQLKQLANANQIDIKICNNEYSFTQNEINGLKALVKAVGL*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0017	shell	direct	high	539	0.998	GCA_000016485.1_00170
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	157900	158268	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	12693	13061	GCA_000016485_1_1_175	GCA_000016485_1_1_175	-	1887192	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MSYSVERVLEKWGNCWGRDRIGTEYPSTTISIPVLPTVRKAHIRFLTDDECLKIEEQIMNLHEDSLLQYQILMALYVQQANERDICTALHISPACMYRERAKGVRFLKGAFTGAKIKFMFLG*	phrogs_hmm	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0018	shell	direct	high	368	0.997	GCA_000016485.1_00171
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	158331	158894	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	13124	13687	GCA_000016485_1_1_176	GCA_000016485_1_1_176	-	1887192	.	PFAM:PF05551.10	homing-endonuclease	MRNGTYDLLPKPIRKYRRHNGKGYQLIFEPRHQLAMSDGYVYEHRFVIYSIYQNNLPNCKLCGCKLTWSSCHIDHIDNDITNNMPENLRPICRACNVMRSHTLIPKYTHKGHSKITFNGLTMTAAEWSRQDGVTVAGNTILRRIRDGWSIERALFETSSTHPNAAVKHTTTKYKNRFEVKSTGISLD*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0019	shell	direct	high	563	0.998	GCA_000016485.1_00172
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	158959	159525	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	13752	14318	GCA_000016485_1_1_177	GCA_000016485_1_1_177	-	1887192	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLAREQSRKRQKKAEKQEQIERKKRLLDGDRGHWLKALQKEVNKFVRLRDKGQPCIACGTVWKPSFQASHFIPQGRSSFLRFDERNIHSGCIRCNLFVGGGNIHGYRPRLVEKIGEQEVEWLEENQHRIKKWEISELKEILKLYRLKNKELENEMQD*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0020	shell	direct	high	566	0.998	GCA_000016485.1_00173
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	159614	159877	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	14407	14670	GCA_000016485_1_1_178	GCA_000016485_1_1_178	-	1887192	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWGFK*	mmseqs_cdd	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0021	shell	direct	high	263	0.996	GCA_000016485.1_00175
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	160069	160293	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	14862	15086	GCA_000016485_1_1_179	GCA_000016485_1_1_179	-	1887192	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKFSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0022	shell	direct	high	224	0.996	GCA_000016485.1_00176
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	160280	160930	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	15073	15723	GCA_000016485_1_1_180	GCA_000016485_1_1_180	-	1887192	.	PFAM:PF06992.10	Replication-protein-P	MTNVIPMQAVKSAVKKSDIPDNAVRLIDRMFIRLKSIFPAWKQAFASEVEYNETKQVWLEELFKAGVVEPMKLKHGLDLAAKSTSPFFPSVGQFIAWCSEDYHVLGLPNEAELYQRYKTFLGYARFNRDEFQYRSKEEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPSFYDKAKADRARDSLMAMMKEHCNDKL*	rep_hall_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0023	shell	direct	high	650	0.998	GCA_000016485.1_00177
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	160927	161673	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	15720	16466	GCA_000016485_1_1_181	GCA_000016485_1_1_181	-	1887192	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGENISLGSEKFALGGSEKFAPITSHSLEPVNEPKKTTQKSESEMLLERFGITGQLAKDFITHRKAKKAPITETAMNGFLREANKVRLSVAESVAISIERNWQGFKATWYLKDKELQSIKQPQSSNTFADDGSWAIGRQLNIDPDLIPEELR*	mmseqs_cdd	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0024	cloud	direct	high	746	0.999	GCA_000016485.1_00178
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	161670	162338	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	16463	17131	GCA_000016485_1_1_182	GCA_000016485_1_1_182	-	1887192	.	COG3645	Phage antirepressor protein YoqD, KilAC domain [Mobilome: prophages, transposons]. 	MNQLLTMTKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENQQKPTALIPQSFSEALMLSAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTSEHGHNYTQTRVTSKGIEFIASHYASELML*	mmseqs_cdd	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0025	shell	direct	high	668	0.999	GCA_000016485.1_00179
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	162385	162732	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	17178	17525	GCA_000016485_1_1_183	GCA_000016485_1_1_183	-	1887192	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MNNRLYQTKGQRFKNEELIALQLEYGCTDFIDELCRNAGGRFVPDVAEDELDKVELANLQLRELSARGLLFAALEKALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0026	shell	direct	high	347	0.997	GCA_000016485.1_00180
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	162873	163061	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	17666	17854	GCA_000016485_1_1_184	GCA_000016485_1_1_184	-	1887192	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MLPIEKAYEIVGGISAMARHFNLTPWAVSKWREKVPAERCAKIEELTDGKVKKSELRPDLWD*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0027	shell	direct	high	188	0.995	GCA_000016485.1_00181
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	163172	163264	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	17965	18057	GCA_000016485_1_1_185	GCA_000016485_1_1_185	+	1887192	.	.	hypothetical protein	MTDLASRLNELMDKQGKKYCGFTKSCWRNL*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0028	cloud	direct	moderate	92	0.989	GCA_000016485.1_00182
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	163230	163871	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	18023	18664	GCA_000016485_1_1_186	GCA_000016485_1_1_186	+	1887192	.	PDB:2FJR_A	Repressor-protein-CI	MDLQKAVGVTYEMARRYTLGTATPRDNKIEAIAKYFGVTPAHLKYGTVDPLENQVTSNVKDVGSFDLWDRNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKSTLRKQGVQYENAVCVIADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNSEEHPDEIADMQDISVIGKVFWYSVLL*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0029	shell	direct	high	641	0.998	GCA_000016485.1_00183
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	163926	165008	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	18719	19801	GCA_000016485_1_1_187	GCA_000016485_1_1_187	+	1887192	.	pfam14350	Beta protein. This family includes the beta protein from Bacteriophage T4. Beta protein prevents the gop protein from killing the bacterial host cell.	MINVNFQNYSYYPFLHTRNSEEEAFVNLSQEDKLSILPSFVLHNRKGTALTASLEKIISSYNGPFILFPPLSEKILNHITNEEKNIFDSSQYYINWQEFTSRYENAIPAILFNNNEKYLRNIIRQTINLENQKGKVAFRIRSTREAELAMNALAAMDDPLNAIIFIDSGYISDLTESYNISNEVLQTFKNGIESLNIVSLSTSFPSSPAIGMTNLDDLSTSNIKAGYIQQKEVDLYLKLSEKYEVLYGDYASIHPIPIDSHDSDGRWSARIDFATDEDFWAIFRMPSEHGDGYQQIANYIANNHIFSHIPESWGKEKILQASEGGVFGRSPSKWVGVRANTHMRRQILQTSFRDELDESF*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0030	cloud	direct	high	1082	0.999	GCA_000016485.1_00184
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	164935	165543	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	19728	20336	GCA_000016485_1_1_188	GCA_000016485_1_1_188	-	1887192	.	NF033832	sce7726 family protein. This family of uncharacterized proteins is named for founding member sce7726 from Sorangium cellulosum, from the Deltaproteobacteria. It belongs a gene pair found sporadically in genera as diverse as Enterococcus, Lactobacillus, Staphylococcus, Streptococcus, Acinetobacter, and Klebsiella, or in phage from those lineages. The partner in each gene pair is a member of the sce7725 family.	MANGSLSGFEIKSEQDSLKRLGGQLETYMQYFENVTVVCATKHLQGVMNIASKNVGIWEFDGKKIIKHRNAIKNQLTKQKWLSFLNIIGLKAILRENKIKVSGLKSELIKRAMILPLDKIKLFILDYLKQQFPLMEKHRQDRQERKLSITNKASSSVINEKMDEPQALSSAEIYRRKKIKMIRQAHHERMFAIFGDAYEYLP*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0031	cloud	direct	high	608	0.998	GCA_000016485.1_00185
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	166025	166195	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	20818	20988	GCA_000016485_1_1_189	GCA_000016485_1_1_189	-	1887192	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFQGVNNQWYWRLKAANHETIAVSEGYTTKQNCLHCIGLVMDTDRKTPIYES*	mmseqs_cdd	nonviral_gene	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0032	shell	direct	high	170	0.994	GCA_000016485.1_00186
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	166210	166431	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	21003	21224	GCA_000016485_1_1_190	GCA_000016485_1_1_190	+	1887192	.	.	hypothetical protein	MQEEMKRYAISYHFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0033	shell	direct	high	221	0.995	GCA_000016485.1_00187
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	166641	166919	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	21434	21712	GCA_000016485_1_1_191	GCA_000016485_1_1_191	+	1887192	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRFKYGRKTRKKAYLIKIKNLIKQAVLESAAKNTNLTPSELAESVCSAVMFIDSYGR*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0034	cloud	direct	high	278	0.996	GCA_000016485.1_00188
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	166897	167100	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	21690	21893	GCA_000016485_1_1_192	GCA_000016485_1_1_192	-	1887192	.	.	hypothetical protein	MKKIAADKIALVMARDILKTNSQYLREVNEYVAEDIARFVSTLSSRLQESIDDSISSSDIFNAHKNQ*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0035	shell	direct	high	203	0.995	GCA_000016485.1_00189
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	167701	167946	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	22494	22739	GCA_000016485_1_1_193	GCA_000016485_1_1_193	+	1887192	.	.	hypothetical protein	MKTVKARLTELKNLINTKINEDYEWMGEIKSPEIIKEIEQLYPLIEKIEKSGKSLEISYAKYISLQLIKKIIRILNKKKSE*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0036	shell	direct	high	245	0.996	GCA_000016485.1_00190
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	168002	168973	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	22795	23766	GCA_000016485_1_1_194	GCA_000016485_1_1_194	+	1887192	.	.	hypothetical protein	MTIKELYLIEVKGELRTEEELNAIAADISKAKLNLEEHISLEEQLVENKKEFENLKNSLITLKKSYNDAQEQITEISQWHEQSEKLSGDISNYEFTAQNNLTKITTLATTAETNKPQIEKYHEDIEGMIKLFNKQKEEIEMIIEDANRASMAGSFKTQSENIDSKMKAVDKILLGSLVATSVISLFNYSTSLSAADSLNILQFLAKSIVTIPLLVIAWLKAKERAYLFRLREDYNYKYSSAMAFEGYKKQVQEQDPKLHQQLLQIAVDNLGINPTKVFDKDLKSTPLETIIDGVGKRLDKAVDGIKGEVNDIPKKTKELIDDE*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0037	shell	direct	high	971	0.999	GCA_000016485.1_00191
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	169311	169562	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	24104	24355	GCA_000016485_1_1_195	GCA_000016485_1_1_195	+	1887192	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQLCNARELHAFVKSKQEYATWIKNRINEYGFIQDEDYFVITERTNGRPRKEYHITLDMGKELRN*	mmseqs_cdd	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0038	shell	direct	high	251	0.996	GCA_000016485.1_00193
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	169707	169826	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	24500	24619	GCA_000016485_1_1_196	GCA_000016485_1_1_196	+	1887192	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDCDGKICHTEQTQQY*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0039	shell	direct	high	119	0.992	GCA_000016485.1_00194
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	169868	170155	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	24661	24948	GCA_000016485_1_1_197	GCA_000016485_1_1_197	+	1887192	.	.	hypothetical protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGRHYQTVAKIISKLPNFPKPVTPVTVDQQNSRPRYIAGEVVRWGRINAKRIS*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0040	shell	direct	high	287	0.997	GCA_000016485.1_00195
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	170152	170811	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	24945	25604	GCA_000016485_1_1_198	GCA_000016485_1_1_198	-	1887192	.	PDB:1Z19_B	Integrase	METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIVAISGYVDTLKTAKARTVAAMLFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD*	common_virus_hmm	common_virus	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0041	shell	direct	high	659	0.998	GCA_000016485.1_00196
GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote	cenote	CDS	170830	171048	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C9	25623	25841	GCA_000016485_1_1_199	GCA_000016485_1_1_199	-	1887192	.	.	hypothetical protein	MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDI*	.	hypothetical_protein	C9	25841	145208	171049	GCA_000016485.1|CP000672.1@region_145209_171049@tool_cenote_CDS_0042	.	unmatched_CDS	none	0	0	.
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	759049	759327	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	1	279	GCA_000016485_1_1_787	GCA_000016485_1_1_787	-	1887192	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MEKQTETTEFLLNELESLKARVQAIENQYAQADQIWTPHDIAAYAKVSYGYVIQTLIKLPGFPTTLGDSRPRAPKKYLTAEVIAFFKNRNKA*	phrogs_hmm	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0001	shell	direct	high	278	0.996	GCA_000016485.1_00811
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	759336	759560	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	288	512	GCA_000016485_1_1_788	GCA_000016485_1_1_788	-	1887192	.	.	hypothetical protein	MMTHKITLPDGTIIEIFTNADEVGQTDLDVQALWREAEQKAQRKMKLDEHIKHKSIQRKKKRRTPQKQARRKQR*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0002	shell	direct	high	224	0.996	GCA_000016485.1_00812
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	759557	760381	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	509	1333	GCA_000016485_1_1_789	GCA_000016485_1_1_789	-	1887192	.	PFAM:PF10554.8	transcriptional-repressor	MNYLNDNLPFNAVACNLFTRKNKPFLQNGLTDKTRLNYINLALAKSRAGRDKLNILQANDSTPFNRAFFVRSVYASIQNNLSFDRLFSMVARNGQPLAVGCFPVKAVCHPVTCYRPTVTSLAVVPKNYLQDTAEMIYKFLCINRTHPHFNLCIQTIHANTEESARLSLNADFRHLVTVAKINPKFNRTLAMKGGFMRNLSLHLIDEIQSEITRFDTLNTCLEMVGATFYLKDESELKGFMLNMSHFYALQCAHIQQKLDECFPKKQPQSQGGEK*	phrogs_hmm	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0003	cloud	direct	high	824	0.999	GCA_000016485.1_00813
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	760441	760671	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	1393	1623	GCA_000016485_1_1_790	GCA_000016485_1_1_790	-	1887192	.	PFAM:PF04216.11	transcriptional-regulator	MAGLRLNCPECGKALQIRSSVRPCATVTIAYVYCSHCELKGVYKAGFEQGQFARFQPIEQPHQWAQDRPPQLESKK*	phrogs_hmm	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_000016485.1_00815
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	760652	760867	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	1604	1819	GCA_000016485_1_1_791	GCA_000016485_1_1_791	-	1887192	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MTLKTLLTIQELEEMGIAKRTKIYYMMKRGNFPKPLKYDRTNRWAREDVQAWLDKQNPNRKQEAQHGGLTA*	mmseqs_cdd	nonviral_gene	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0005	shell	direct	high	215	0.995	GCA_000016485.1_00816
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	760935	761099	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	1887	2051	GCA_000016485_1_1_792	GCA_000016485_1_1_792	-	1887192	.	.	hypothetical protein	MNKALSVMTELSRLPISTQRRFIHEIAREFSQGKIPLHSSILPRYDELNHNEKR*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0006	shell	direct	high	164	0.994	GCA_000016485.1_00817
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	761092	761355	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	2044	2307	GCA_000016485_1_1_793	GCA_000016485_1_1_793	-	1887192	.	CDD:TIGR01551	phage-major-capsid-protein,-P2-family	MNNLYLSNYFGGMPSIIPPQFPKKCAVVTTLKNLSIYTQKTSCHRSIYNEENTGDYINAYYRQECYVVENLNLMTAIEHKNVVFENE*	hallmark_hmm	common_virus	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0007	shell	direct	high	263	0.996	GCA_000016485.1_00818
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	761352	762089	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	2304	3041	GCA_000016485_1_1_794	GCA_000016485_1_1_794	-	1887192	.	CDD:TIGR01551	phage-major-capsid-protein,-P2-family	MKDSQIKQYASQLATKYQGQPSKQSDVVLSITLNEKALQSLMTDFKARSDFLGALNWLPVKNVEGKKFLGALKGTTTGRKQEGRNRSIMKYDETYKTCEIDSGVQINWRLIDELEVTQENFEELFTRLTENQFILDMLKIGWHGESQAANTQAEDLSDVTKGWLAQLKEQNPANIITGGKSAGKIALFTENADYKNLDELATALRNKLPAEYQERNDLVFLVGAELASKANANIQGHTFILKITA*	hallmark_hmm	common_virus	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0008	shell	direct	high	737	0.999	GCA_000016485.1_00819
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	762572	762997	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	3524	3949	GCA_000016485_1_1_795	GCA_000016485_1_1_795	-	1887192	.	.	hypothetical protein	MVIKTSLINIFIPNYLDKLKIAPLKDLYISKDDIEKIRKDLNLLSILDTRPPQIPEKITQEIEKLKDDNALLYSIIDSKNQEILALEEKNKELIKHKNKSALIERDKMLSSHQTIIKGLLLVIDKMHNKNGYLPLLKKNFP*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0009	shell	direct	high	425	0.998	GCA_000016485.1_00820
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	762972	763391	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	3924	4343	GCA_000016485_1_1_796	GCA_000016485_1_1_796	-	1887192	.	.	hypothetical protein	MEKINDGLFQFNRKDYIKEDYTSLYSEENIFHNISGITNNKLFYKKLSEKTSTNLYTKKKEKINLWEEQEIHILEDCFYSGYFKIPQSRINLGFLLEPEMIPEKVRVIIEHLLPELELYSHYEITGNEDTEDGYKNVFN*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0010	shell	direct	high	419	0.998	GCA_000016485.1_00821
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	763561	763653	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	4513	4605	GCA_000016485_1_1_797	GCA_000016485_1_1_797	-	1887192	.	.	hypothetical protein	MGLYSAEQDFLTIEQFISNFKREHDKKTLN*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0011	shell	direct	moderate	92	0.989	GCA_000016485.1_00822
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	763950	764495	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	4902	5447	GCA_000016485_1_1_798	GCA_000016485_1_1_798	-	1887192	.	.	hypothetical protein	MKLQNQDKQAELEQLIGNLNVSNQVFYEIQDKALSIKENISRNKKLIEALESDNQEAQKEIDNLQVSDTGEINFNGFDELSERISKNTRKIDTIRKVVEKFEIQLEILLMTEYEQHLKICNESALKCFSLIGDELLNEFISGGIAEELSRILTIFDKGGRYADVLKYSTDSNIRDYFLLMN*	.	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0012	shell	direct	high	545	0.998	GCA_000016485.1_00823
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	764497	764712	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	5449	5664	GCA_000016485_1_1_799	GCA_000016485_1_1_799	-	1887192	.	pfam05930	Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	MNEKMPQAERFIKLPEVMNKTGLGRSSIYRKMNTGDFPRSIQLNKNNIVWLESEVNAWMQAQIEKRNQKEK*	mmseqs_cdd	common_virus	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0013	shell	direct	high	215	0.995	GCA_000016485.1_00824
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	765187	765432	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	6139	6384	GCA_000016485_1_1_800	GCA_000016485_1_1_800	+	1887192	.	pfam04606	Ogr/Delta-like zinc finger. This is a viral family of phage zinc-binding transcriptional activators, which also contains cryptic members in some bacterial genomes. The P4 phage delta protein contains two such domains attached covalently, while the P2 phage Ogr proteins possess one domain but function as dimers. All the members of this family have the following consensus sequence: C-X(2)-C-X(3)-A-(X)2-R-X(15)-C-X(4)-C-X(3)-F. This family also includes zinc fingers in recombinase proteins.	MIFCKICGYKAVINRSKREHKEFTKLYCTCKNKDCAHKFVIHLTFSHTTKPSKLEEQNYFKYIITNLPDDKKQELRSMLSA*	mmseqs_cdd	common_virus	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0014	.	unmatched_CDS	none	0	0	.
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	765438	766622	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	6390	7574	GCA_000016485_1_1_801	GCA_000016485_1_1_801	-	1887192	.	PDB:1Z19_B	Integrase	MSKIVKPLTNTTLQNLKPISKEYIKSDGNGLYIRIKPNGTKIWYFAYKWHKKHRKMSLGAFPDLSLAYAREIATEYRGLILRNIDPLEYRNSSNIEEKKTTFAEMAIRWRDKRLKLGKLKPETVNDAFRRVELHLFPKIADLPIDQANYKTLEPVLSPLKNSNTLYKINIAINQIFRMAEDEDLIVKNPFRKIHDEFTYVETKNHPTLAPEELPRLFEVMQGANLEKPTALLIEWQLLSILRSSEAVSIEWADIDWDAKALHIPAERMKGGKRSHSVPLSRQALNILEQMRRYNGNRKYVFCSRIAPYNRPMNSGAANVALKRMGFKGLLVAHGLRSIASTYLHELDRFSSEAIELCLSHENRGKVRAAYDKSKKWRSRQEIMQTWGIMWRNAK*	common_virus_hmm	common_virus	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0015	shell	direct	high	1184	0.999	GCA_000016485.1_00825
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	767079	767606	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	8031	8558	GCA_000016485_1_1_802	GCA_000016485_1_1_802	-	1887192	.	cd04194	A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis  adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	MAACRDTFIDVKNEAYKKSIGLEGYSYFNAGILLINLNKWKEENIFQKSINWMNKYNNVMKYQDQDILNGICKGKVKFINNRFNFTPTDRGLIKKKNLLHVKMPIIISHYCGPYKFWHKKCGHLNCHIGNLLLKEMDKIIDVPSSWYDHFEKIPFLIKIKRLRKRIKDKLIYGIY*	mmseqs_cdd	nonviral_gene	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0016	persistent	direct	high	527	0.998	GCA_000016485.1_00827
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	CDS	767578	768135	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	8530	9087	GCA_000016485_1_1_803	GCA_000016485_1_1_803	-	1887192	.	5GVV_A	Glycosyl transferase family 8	MTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDRQTDMNIIFSSDNYYATYLAVSIFSIIKNTPEKINFYILDMKINQENKTIINNLASAYSCKVFFLPVCEADFQNFPKTIDYISLATYARLNLTKYIKNKEYRKSYLYRCRYINKLFTSRTLGYRYNELLFGSMSRYFY*	hhsuite_tools	hypothetical_protein	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_CDS_0017	cloud	direct	high	557	0.998	GCA_000016485.1_00828
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	880366	880824	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	1	459	GCA_000016485_1_1_928	GCA_000016485_1_1_928	-	1887192	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MTEGKVYLALYKGKKTGWTPKAILARLSDWLTRKLTKGLYSHCEIVVNKGFKVCYSSSIRDGGVRSKIMYLEHEKWDLIELQNITEERIKAYFEQTKNMRYDWWGALGIVLGLKQKRSKFFCSEWCFNAIKNSDEGWRFSPNQLGAMFKHDD*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0001	shell	direct	high	458	0.998	GCA_000016485.1_00961
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	880821	881420	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	456	1055	GCA_000016485_1_1_929	GCA_000016485_1_1_929	-	1887192	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNNFIEIEIENESELETKQLIYFKGKHILVDRQPTELHKWNGSWIVDEKKKTEIKRELIKRLVDSIDDTAANISARWTRFAEEYKERESAALAFKEANFTGEVSIYISSFATVAGLDNKSATLLILKQAEGLRTLQEQLAVQRMRKYELKHEELSEEKLQQIHNDIIRKMKALTEVQQ*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0002	shell	direct	high	599	0.998	GCA_000016485.1_00962
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	881432	881890	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	1067	1525	GCA_000016485_1_1_930	GCA_000016485_1_1_930	-	1887192	.	PFAM:PF12571.7	tail-fiber-protein	MQALSARVEQKIEENKQSTLREITNAKADINQQFLQAQKNLSQIGTLKKVWQGSVNSGSITLSEKCFGKTLIFYIYVSSEYSNYNESIEIVSFEAGAEDEDGGRLTSIREVIYNDRYRNTIPKEFTAYIAGDGKTINIGQIDNRYIKRIYIR*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0003	cloud	direct	high	458	0.998	GCA_000016485.1_00963
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	881989	883497	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	1624	3132	GCA_000016485_1_1_931	GCA_000016485_1_1_931	-	1887192	.	PDB:1OCY_A	Tail-fiber	MKLKLIDLFKRITWAKNGDLTDFSQTNYEAGWAHLGDDTPTVQDFNYVQQMNDKKDQWLFNQLKAVLEKANIEPTEENVNSLRDAILALSKGYSHPKSLTADTVNFVDEQGHTHEIAKATLQQQGITQLYTGYNSQREDLALTPKTAYQLKQLIDSNTRSLDNVIPNSKKSSAVNSNSADTVANSAAVKTAYDKAVEAKTTADNAQRTANSKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRAVTNPVGFLKADGSTFNQQTFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPSGWIAFDEIATQVTEQRYPELYRHLVGKYGSLSNVPLAEDRFIRNASNNLSVGETQSDEIKKHVHKVRTHWVNSNDSNIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGELKQDRERLLSNFV*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0004	cloud	direct	high	1508	0.999	GCA_000016485.1_00964
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	883507	884121	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	3142	3756	GCA_000016485_1_1_932	GCA_000016485_1_1_932	-	1887192	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MKDILTALNDDFKQLGRERLLSQFNYSPNLNAFLSLLLLPHHEIQATLKQMLTERHIDTAIGKQLDGVGDIVGMPRPFARVNGDWYFGFSGQSKAKPFSRAPIRDLATQTNSRDFNYMLDEHYRRLIKWKVIANHSHGTLDDVIEACRAIFLAERVSITEGQDADVHITITRMAKNRLDAVEQEPVLWIPTAAGVKVTVEFINA*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0005	shell	direct	high	614	0.998	GCA_000016485.1_00965
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	884130	885566	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	3765	5201	GCA_000016485_1_1_933	GCA_000016485_1_1_933	-	1887192	.	PDB:5IV5_GD	Baseplate-wedge-protein	MANYGLTRSGFVRKRMPEQLKELYENAKKMFGEDIDLSPETVMGMMLNIESERFAALWELIESVYSAMYPMSATGANLDRAVSFTGVTRLQAEHSTVPVIFYGNAGVEIPQYTAVRNAATQTLYYSDEDARIDSNQAAYARIELNSNTINTGDVFSVVVNGVTYRFTAMRSSSASIIQGLANQLKAISYADVSNDNVIIEISAQSIPHFSISVSQNLTLSRLGVRCMLSTESPSEDKADIGQMIELVNMIDGVVEVNNVVEGASGRLEESDIELYQRYHRGVWQNGAGTIDSLYANLSKVAGVHSLRIYENDADQTINGIPKRSLYAVVKGGLDTDIASTLLKFKPLGIGTHGQTEVTVRDSQNQPHLIKFSRPTKCYIWLKVTIETFVDEDEIARAGYIVSALNNILKYGKSLGVGADVIHQRLIAACIAVQGVGKVTVQIGKTNNITDPEPRYQEQNITIAPDEEAIFDPSIIVMS*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0006	shell	direct	high	1436	0.999	GCA_000016485.1_00966
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	885559	885924	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	5194	5559	GCA_000016485_1_1_934	GCA_000016485_1_1_934	-	1887192	.	PDB:5IV5_BD	Baseplate-wedge-protein	MIDLKLSGQHDLMIKDRKLVLVDGVNQKAQQIKVVLLTFLGEWFLDTTIGLPYFDEILTKNPDNARIQSIFRKKIMGVKGILAVERLSLEFHLKDRVLAVQFSARTNEGVVKDKVSIKRNG*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0007	shell	direct	high	365	0.997	GCA_000016485.1_00967
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	885921	886592	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	5556	6227	GCA_000016485_1_1_935	GCA_000016485_1_1_935	-	1887192	.	PDB:4RU3_A	phage-baseplate	MTDILTALSEINVSLPGKIVSYDAETVRATVQPSIPKRLANGEVLNAPQIVNVPVMFPMADINGAVAQVTLPVKVGDGCLLIFSQRSLENWLSGSNDAPDDPRMFDLSDAFCVMGGNSRSPNADVENLCIKYGSGKIKIAPNGNITINSPDVRVTTDNFTVTATTSTFNGNVIVNGGISTAGNSGSVSVSGSLTTTGDVMADGVSLQSHKHKGDSGGTTGAPL*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0008	shell	direct	high	671	0.999	GCA_000016485.1_00968
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	886595	887551	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	6230	7186	GCA_000016485_1_1_936	GCA_000016485_1_1_936	-	1887192	.	PDB:1WRU_A	tail-protein	MSYRFLRSYKLMIGKKGQKDAIVIEPPMRIEFDIEKDCEAEPNENTIKIYNLASTTRKTIEQPDMRCVLYAGYEQEGNVLLCSGDIATAYSYHQGADWVTELYVLDGLVEIRDTAVSLGYVGGVSSTQITNDIAAKMGVTVVGADNLKSRTWANGFSFYGAARKALDKVVAGTGLEWSIQNGELQIVNRNGVTKRSGYVLAKDSGLIGFPERTREAARSKKQDTPNKKQDEKFAFDRQARDGWNVKSLLLPMVNPCDKIKLESVTVTNWFRVEKIKHSGDSHSSDWQSELHLVDLNAPTKTQMETQSKHRKKRKKKDD*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0009	shell	direct	high	956	0.999	GCA_000016485.1_00969
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	887548	887862	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	7183	7497	GCA_000016485_1_1_937	GCA_000016485_1_1_937	-	1887192	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MITINLANKNDFITEVNLDDEVFFLHFSWNDTIGFWSLTIENAYNDELVSSIVILPNRPLIAPVRRDELPLGELIAVRDDNLQTIGRDDFINGKAVLIYIGVDE*	hhsuite_tools	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0010	shell	direct	high	314	0.997	GCA_000016485.1_00970
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	887859	888440	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	7494	8075	GCA_000016485_1_1_938	GCA_000016485_1_1_938	-	1887192	.	PFAM:PF06995.10	tail-fiber-protein	MSIVNLLFSALAGKRTTIGVLELDALLTENTSLSSQITEYPIEDGTVISDHITRESERLSLSGVITGTGTLFNVGLGKYKLIAAKETLRELHAKRELVTIVTGLDVYEDFAIESLDIERNSDDGERLNISAEFRKIQKVTLRKEEVPPDKAAPNAKGKAGQTKAKTGKAQTGKPTNTQAQKITKLGEWSGKKQ*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0011	shell	direct	high	581	0.998	GCA_000016485.1_00971
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	888531	890861	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	8166	10496	GCA_000016485_1_1_939	GCA_000016485_1_1_939	-	1887192	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MNAIRELVTLLRYKVDNSGLKAYVVQTQQAAKGIRSNLNNAVDGLRAKFSGAAVSVKEVGNNLKDAKNQMLSLRNLVAGYFAMIAGGNVIKIADDWAAVDSRVKLATKSVEEHKYALSQIFDLSQRSGQDYLASADLFSKVNRSAGDLGLSLDDTLNLTEIIGQTMTIGGGDQGAQQAALMQLGQALGSGALRGDELNSIIEQAPRLANAIADSFGVPIGQLKDLGKEGKLTSKELAQGLLKQADKIQKEFDQMPKTFGRGMTILKNKAGQLIDVAVNKVSKLGAAFYNAAEWVTENIRLVGFLAGTVIGGKLMFALAAAKKSLRQLLMMGARAVAPYLAMAAAAGVVALVLEDIYGWTQGDLSFTGALVGRYEVWADKFAALGKLADKLWINVRGLLKDLSRMAGVEINFDSWQAFATDVLEYIIAAVRNLINTVSGMVRIIRALINGDYAGAWSSAGDMIDGLSLKFLPLYSVGLMVLGGILSAVWALFSPFRAFFGLLKGGFRSVMFVAKPFIKVAKGIASPFIWAQKHFKLFSRVGSGAFSLLKRGAVKFGVIFKSVVGTVVKGIFAIGRAMFMAVASNPILLAISAVIGLVILLVVYWDEVKAFAIAAWEAISTKAAEIWQSIITGASEMWDNITNKAAESWDNVKKDAGEKWNSVTTMFKNAWQKSIDTVVGWFNSLIPSWIRDLFSDGAKAEVKLSGEALTTPVSGHVSPQRLGYGGRPIFAPNQNMTQTNNFNIQGSANPSGVANAVSDKLSRGSSTSFGMGAIEYAG*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0012	shell	direct	high	2330	1.0	GCA_000016485.1_00972
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	890858	891010	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	10493	10645	GCA_000016485_1_1_940	GCA_000016485_1_1_940	-	1887192	.	.	hypothetical protein	MIAWRPFLAGKVTLTELNTAGLTDMGELLKINRLLDAVDAMEAKQMEKNR*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0013	shell	direct	high	152	0.993	GCA_000016485.1_00973
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	891046	891528	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	10681	11163	GCA_000016485_1_1_941	GCA_000016485_1_1_941	-	1887192	.	PFAM:PF10876.7	Tail-assembly-chaperone	MARSEIQIGESTFFVQKFSVMDQLRIFGDLQKTLVPSLAKVIGFSDEKPKDATSAQLAELAQKSAANFAQGLQDLSQLLSGQELVKLADMLIKPELVTVQRDDFNNGTDKKLSKTDFDLVFDDMSELIELVIFILQLNFSSFFTKFLARLGSVQELVKKA*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0014	shell	direct	high	482	0.998	GCA_000016485.1_00974
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	891515	891952	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	11150	11587	GCA_000016485_1_1_942	GCA_000016485_1_1_942	-	1887192	.	PFAM:PF11681.7	virion-structural-protein	MALATYAPDEVSIVIGAVIVSGFADGTFIDIEEMSDGVSSVAGADGEVARATSADPRKKVTLTLLQTSDTNDVLSELYAADKVSKNATFPIAVKDLRGRSLFAASTAWVVKSAKLELGKEVGSREWTLETADGKLFVGEMTDGTQ*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0015	shell	direct	high	437	0.998	GCA_000016485.1_00975
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	891998	893077	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	11633	12712	GCA_000016485_1_1_943	GCA_000016485_1_1_943	-	1887192	.	PDB:3J9Q_Q	tail-sheath	MKMAKIDRLVNVAIDLNTTTIAGKSFSDLLILGEHTLNNSARLLVVTDPNELLDLGLKSNNPLYIAVATAFAQPSHVAQVFIGRKAQDESVTDALAAVARENNSWYGLALVSREDADVMLAAAWAEANGKLFVTASADEKLPQSVEKTDIASKLEAKQYYRSAVMYSHKATEEYPEIALMSYSFTFYPGSETWNLKKLAGVSYSPLMEGEYLACSKKNATTFEKFNDSFAVTQGGKVVAGEWIDIIRFRDWLVQEVQINVTSVLINAYGKVPYTDKGIQLIGAAVRQALDLGVARGGIAPTELDDNNKEIPSYVISLPLAAKVSNNNKGKRLLQDVKFSARLAGAIHLTEIKGNLAYSL*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0016	shell	direct	high	1079	0.999	GCA_000016485.1_00976
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	893058	893567	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	12693	13202	GCA_000016485_1_1_944	GCA_000016485_1_1_944	-	1887192	.	PDB:5A21_G	tail-completion-protein	MLERLYDLLGDLSDRPFIRAYENGREPEKPFFTYELKFERTPEHFHYSAVNDEGNQTVKTHIDAVLELNYFGGNSLQILRDVCMRLSTQSCRERWLNDGVALIRIGRITHLAFLNEQREYEDRAMVELEIRYAASVQDIVGIIEQVEVTANIGRASEKNLIGVNENGEN*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0017	shell	direct	high	509	0.998	GCA_000016485.1_00977
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	893569	893928	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	13204	13563	GCA_000016485_1_1_945	GCA_000016485_1_1_945	-	1887192	.	PFAM:PF10665.8	Minor-capsid-protein	MQIFSSQSSFRKPYKILVRSDGEYVKGKWVNGGEIEQMLMASIQPLNGAEMDRLVVSMQGRRVSSAVKIYTDQKLTVAGENAHNGAVVLFDGERYEVISRASYHSGVLSHHRYVAIRVK*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0018	shell	direct	high	359	0.997	GCA_000016485.1_00978
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	893928	894386	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	13563	14021	GCA_000016485_1_1_946	GCA_000016485_1_1_946	-	1887192	.	PFAM:PF05069.12	Virion-morphogenesis-family	MSSVVKVKINNKGLEKELELINKIGKARVKVGVQADAGVHSESGENLVDIGIWNEYGTAHIPSRPFIRQTFEDNQQAVAQYLGRVVANVAKGGDLVQELSKLGQWYQDKQKKTLTSYPWTPNAPSTRKRKKSSKPLVDTSQLVNSIRYKVEI*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0019	shell	direct	high	458	0.998	GCA_000016485.1_00979
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	894432	894728	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	14067	14363	GCA_000016485_1_1_947	GCA_000016485_1_1_947	-	1887192	.	PFAM:PF13262.5	head-to-tail-adaptor	MSAYSLLNLFYPLSQQMPEDMVNKALSVADNKRPDCLSDDKQDEAVAWYAAYLLAQSIESGVNAAGLRREREGDLEREYFSGAIKAATLNAFWRSITS*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0020	shell	direct	high	296	0.997	GCA_000016485.1_00980
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	894732	894920	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	14367	14555	GCA_000016485_1_1_948	GCA_000016485_1_1_948	-	1887192	.	.	hypothetical protein	MIVRNIEARLIRVGGEFIAPNQEVEIADDAVGLDRLIERGVLIDVTPKAEEPKKDGKSKKQE*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0021	shell	direct	high	188	0.995	GCA_000016485.1_00981
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	894923	895870	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	14558	15505	GCA_000016485_1_1_949	GCA_000016485_1_1_949	-	1887192	.	PDB:8HDT_C	Major-Capsid-Protein	MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSESPEWAETVTERIYDMVGMAKVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGFINHPNLGETSVTGGWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHPNLTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEV*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0022	shell	direct	high	947	0.999	GCA_000016485.1_00982
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	895932	896351	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	15567	15986	GCA_000016485_1_1_950	GCA_000016485_1_1_950	-	1887192	.	PFAM:PF11133.7	virion-structural-protein	MSMYDQLQQKAFAGMKGDSRYDLVETFAAENEIPFGVVITQGTSATQAKLGGTKPIGIALHSHAVVGGYAKFDAVSVLRKGVAWCVVKDSEAITAGSAVSFDPASGKVAKTGTALPNATFKTAVVDCGKYGKLALVELA*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0023	shell	direct	high	419	0.998	GCA_000016485.1_00983
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	896364	897437	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	15999	17072	GCA_000016485_1_1_951	GCA_000016485_1_1_951	-	1887192	.	PFAM:PF09979.8	head-maturation-protease	MVMRYDRRGIQARRDDNGFIYDTPILTRSGVFVYELPNGKTRREYRPPDEVFKADSLRAYKGLPITEDHHGLVTKNNAHLVVGSILTEGKQDGQNLTADIVIYNTKAVDFGKKELSVGYKVDIDETSGTTEDGEPYDVIQRNIRPNHLAIVTVGRAGNAALNLDAADAVEFNEDGENPMSNTQTTLSDIRLDSGITYQAAPEVIVELNKLKQDAKDAVTAKDKEAARADAAEAKVKELETQVEQIKQDAVSQAKVRVELENVAKVHKVEVKADSTDRALREAVIKAIRQDNADLSQKSDGYIEAAFDIAVSDAKQRADVAGVQRQQLTPSATNQPTFTQDSQTKLTGRAAMIASRNQ*	phrogs_hmm	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0024	shell	direct	high	1073	0.999	GCA_000016485.1_00984
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	897563	898780	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	17198	18415	GCA_000016485_1_1_952	GCA_000016485_1_1_952	-	1887192	.	PFAM:PF04233.13	Minor-capsid-component	MFPHAIEREYVGYLRGVARNINTMVNQKLVEIRPHFQANIRQDSFSDTLERWLIELLQAVLIFVDEKEIAQFVRGYIHQTENFNGKQFHKVLKSVYSVDVFTTEPWLDDALKIAEWENIRLIKSLPTQTLEKLRSRFTQAVRGGWRWESVVDDVKSILNTNEKRATLIARDQIGKLNGHLTKLRQQNIGVKSYIWRGMLDERERAHHVDREGKQFDWDNPPDDGHPGEPILCRCYAEAVFPEFEDLGRDDAEPIDPISTIKTGKMNLDELFDNSLSGGGNKSFSNFGSVGPALVTLAKESIGLDISGWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKADILMLPQIVSSFDSIDYTGTSDAGSETFLLRKEIGDEIFCVQEVRKRHKKIAVKTMWIRKKKKP*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0025	shell	direct	high	1217	0.999	GCA_000016485.1_00985
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	898761	900077	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	18396	19712	GCA_000016485_1_1_953	GCA_000016485_1_1_953	-	1887192	.	PFAM:PF06381.11	Portal	MAFNQDGYAEALGINHFARNSANSTALFDLTLYELGGLAARVVDMPADAAISRSIEIQGDQDDAISNEIERLKILPALADMVRWSRFFGGAVMVLLTDDGARLSEPLEPSRITRIDEVRVFDLSQISPTANRYSDPTKPNYGRYSSYRLNIGTIAGSLDSQVEIHESRLLFMGGDSLPERLKNGLHWIGRSAVRSVYPKIRDYQKSLMWASLILERKQQAVHKMKGLALAIDNGLEPVIRERINLVERGRSLLNGVAVDSEDDYNILNADLSGIVDVLDEFKVAISADVNIPVAILFGQSAKGMNATGQSDFESYYDLVESIQQHKIKPVLEKLIELLMFQKHIKPFENWKIKFPSLNTPTDKEIADVRKTNADAAKIELDRLINLVDSGALSTEELRVQIAGEFGIQADKLPQVDDDDVEKYQEEQKAKGVVVSSRN*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0026	shell	direct	high	1316	0.999	GCA_000016485.1_00986
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	900079	901428	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	19714	21063	GCA_000016485_1_1_954	GCA_000016485_1_1_954	-	1887192	.	PDB:4IDH_A	Large-Terminase	MRQTLIKPLKPMIKPCRYKILYGGRGSGKSWGVAQLLVEIAVRTKVRVFCGRELQNSMSDSVIKLIADTIEDLGYLEEFEVQRNAIYCLKTGSEFMFYGIKNNPNKIKSLEGIDLVWIEEAENVSNESWDILIPTIRKERSEIWVTFNPKNILDPTYQRFVIAPPKNSFVRKINYDENPYFPETLRLEMEECKERDYELYRHIWLGEPVADSDKVIIKPVWIECAVDAHKKLGFLPAGRKIVGFDVADDGVDSNANAFVHGSVVLRVDEWHGEDVIGSADRTRLNALEFGANEIVYDSIGVGAGVKAHYHRLDDKSIRINGFNAGGAVFEPDAEYVYGKTNRDMFANIKAQAWWCLRDRFYKTYRAITYEEQYPVDEMISLSSDIRDLEYLKAELARPYVDYDGNGRVKVESKKDMKKRGIPSPNKADALVMCFAPKEDVLSRFIGLGS*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0027	shell	direct	high	1349	0.999	GCA_000016485.1_00987
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	901409	901777	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	21044	21412	GCA_000016485_1_1_955	GCA_000016485_1_1_955	-	1887192	.	PFAM:PF07141.10	Small-Terminase	MSKKKTKPKIEIDLSMVESLAAQGLTNQQIADSLGISERTLQNRKKDNAEFAEAIKKGKAKGIAVVTNALMKKIKSGNVTAMIFFLKTQGGWKENNQLEIEMKKEKKLPTLAELFGDETDPD*	hallmark_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0028	cloud	direct	high	368	0.997	GCA_000016485.1_00988
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	901835	902056	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	21470	21691	GCA_000016485_1_1_956	GCA_000016485_1_1_956	+	1887192	.	.	hypothetical protein	MMKKIDVLKDLMAKNEWKKAISLASKFPRLGNAKDAIKSAQMAYTNPNFVRQIKKDPDKLIYQGIQTLIAKYG*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0029	cloud	direct	high	221	0.995	GCA_000016485.1_00989
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	902053	903411	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	21688	23046	GCA_000016485_1_1_957	GCA_000016485_1_1_957	-	1887192	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MMNKDLNIEYISTDVLKPYVNNSRTHSDEQIDQICESIEEFGFTNPILIDENNGIIAGHGRLLAAIKLNLYTVPTIRLTGLSDIQKKAYVIADNSLALNAGWNFELLSLELNELKDLGFDIDLLGFDDDFLKSLDGDLLADISGDSNSKEKLDLKQAFLAPPFSILNSREGWWQDRKRKWKALGIDSGSGRDSGMQRGMNSMARYNSKEDTSMSESDDSIFDPVLCEILYSWFSPKGCQILDPFAGGSVRGIVASKLNRNYIGVDLRAEQIEANLKQRNLVCSNDELQPIWICGDSINIDKLANGVSADLVFSCPPYADLEVYSNNPNDLSNMDYDNFKKAYFEIIKKSCDMLKDNRFACFVVGEVRDKKGNYYNFVGDTIQAFLEAGLSYYNEMILVNVCGTMPMRAATPFKGSRKIGKVHQNVLVFVKGNPKIAAEYCGDVDVYIPNEDN*	rep_hall_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0030	cloud	direct	high	1358	0.999	GCA_000016485.1_00990
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	903625	904014	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	23260	23649	GCA_000016485_1_1_958	GCA_000016485_1_1_958	-	1887192	.	PFAM:PF10828.7	Rz-like-spanin	MTWWLFVIKKLGLNVLSHGCKHFNKVVAVFAGVFILALLYMQHTNKLNIERQSAVIDSMHEKVIKRDKIIDELHEDVDEQRKIAEKRLAQEQLIREQSYAQIQSIKKILESNQCSRTVLPNGVADELRK*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0031	cloud	direct	high	389	0.997	GCA_000016485.1_00991
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	904011	904481	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	23646	24116	GCA_000016485_1_1_959	GCA_000016485_1_1_959	-	1887192	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MVVARCLMPFGGGSLRLNWGLKMSKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWNDREPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHFYDGPHFELLRSVYP*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0032	cloud	direct	moderate	405	0.86	GCA_000016485.1_00992
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	904921	905691	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	24556	25326	GCA_000016485_1_1_960	GCA_000016485_1_1_960	-	1887192	.	PDB:2FJR_A	Repressor-protein-CI	MTTLAERLKRTLLERNLTQNDLAEMVGTTQGAISNIVKGETQKPRNILEIANALGVDPNWLRNGGDMIVSHSTLENSQINNNQGQTVNNFFDSGSDELREMLHKQQISLKTKPTEEWVFALDVNRLAETDIINAHFPRPFEALHLSQDGMMDLLKLRSTANVAMITMFNESMSPVINKKDLMFVDTNCKQYAGEGIYLFVMNNELYVRRLYQTPSGVLNAVAENERVGSSFEIDDLSRLNVLGRCVRKFSIIAEDL*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0033	shell	direct	high	770	0.999	GCA_000016485.1_00994
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	905816	906022	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	25451	25657	GCA_000016485_1_1_961	GCA_000016485_1_1_961	+	1887192	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MQNETINLAIQECGTQKKLANACGVTQGAVALWLKGGGINGKYIPLIAKASNGKVTETDILRSLTKSQ*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0034	shell	direct	high	206	0.995	GCA_000016485.1_00995
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	906066	906518	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	25701	26153	GCA_000016485_1_1_962	GCA_000016485_1_1_962	+	1887192	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MNSKDIQRTLHRDCKNASGGITTLALTLGKSPNILGNKLNVECENNHLSFIEALDLIEITNSTRTVAAIADKIDHLIVPMPKCASCCADVVQGFLDITTNAGKIGEQIKSAVHPNSDLGRELSNKEKQTISASIDALIESALCLKWELEQ*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0035	shell	direct	high	452	0.998	GCA_000016485.1_00996
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	906564	906797	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	26199	26432	GCA_000016485_1_1_963	GCA_000016485_1_1_963	+	1887192	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MENTNPNEKISQSQCDRILRYLQSGKRLTSLEALDKFGCLRLSARILDLKNRWHQISDEFVHDARTGKVYKAYFMAV*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0036	cloud	direct	high	233	0.996	GCA_000016485.1_00997
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	906751	907581	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	26386	27216	GCA_000016485_1_1_964	GCA_000016485_1_1_964	+	1887192	.	PFAM:PF06970.10	replication-initiation-O-like	MHAQAKYIKRILWRYEMSVELMTKAFKSKTGNPLTKLVLVKLADNANDDGVCYPSYKRIAIQCEVSRPTAISHVKKLEAMKYLSIRERKTENGNATNVYILHPENWEILEPFTSKAALPPLVNELNHPSKAALPPLVNELNPEPSIEPSDNHHIKKTTQKSESEILLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNLPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	phrogs_hmm	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0037	cloud	direct	high	830	0.999	GCA_000016485.1_00998
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	907566	908096	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	27201	27731	GCA_000016485_1_1_965	GCA_000016485_1_1_965	+	1887192	.	PFAM:PF06992.10	Replication-protein-P	MANSITENQINTLPRERAQRAEETINWLFNELKSIFPGWRAAFETEADYLSAKKTWLRVLAREKITRPQLENGLCEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTFENYSEITHRSGRKSAVEFSF*	rep_hall_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0038	shell	direct	high	530	0.998	GCA_000016485.1_00999
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	908199	908423	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	27834	28058	GCA_000016485_1_1_966	GCA_000016485_1_1_966	+	1887192	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0039	shell	direct	high	224	0.996	GCA_000016485.1_01001
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	908460	908876	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	28095	28511	GCA_000016485_1_1_967	GCA_000016485_1_1_967	+	1887192	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWCVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0040	shell	direct	high	416	0.998	GCA_000016485.1_01002
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	908969	909580	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	28604	29215	GCA_000016485_1_1_968	GCA_000016485_1_1_968	+	1887192	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKMCGNYFIKTVSSLQKVCSPECAIKLSREQTRKAREKKDKQARIENRKKMTALKEKNKTKHELTKEAQAAVNKYIRLRDMGKECISCGTPLVAEQLGGGFDAGHYRSRGAAPHLRFYTLNIHGQCKKCNRYYGGNVQQYRLGLLDRLGSEKVEQIEADNRPRHYFPDDLRRIKQIFNKKMPINRKKKGIICRPNTS*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0041	shell	direct	high	611	0.998	GCA_000016485.1_01003
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	909559	909924	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	29194	29559	GCA_000016485_1_1_969	GCA_000016485_1_1_969	+	1887192	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MQTKHILDIKLTARRYGKWAREGEGINYPSIQPFLRKATPDHGIPMLDDETAMRIHDATLIMRNVTPELYQVFMLRYVSNLSQGDVGREMRVSVPTIKSYLYAAHQSLKLLLTQNKCIFLA*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0042	shell	direct	high	365	0.997	GCA_000016485.1_01004
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	910047	910847	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	29682	30482	GCA_000016485_1_1_970	GCA_000016485_1_1_970	+	1887192	.	pfam12869	tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	MKKAVLSSLILVALPFSTLAEDKIYNPSPQEIELMKLVIKEEIDVYFQGGKTAYKYGDYVFTTISELEKEYDKNEARANKKFKGKNLIVSGTIGSIETDLFDHPYIVFKSKNEFNFNATQAKFKKSAYDKVIDLNKSDKVNLVCEGAGEVAGTPMLDNCQFRADVIKSITDQYLADYNNLLTKGVDTSKVFLNKIVYIVARRAYITNGFSKCSKKITSDCLDKGVDKKKEKAIEDAAENNDFIPELKPLAEYLDFHYTPKDQRNNQ*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0043	shell	direct	high	800	0.999	GCA_000016485.1_01005
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	910858	912006	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	30493	31641	GCA_000016485_1_1_971	GCA_000016485_1_1_971	+	1887192	.	PFAM:PF13588.5	endonuclease	MTDAILKDKILSHAQHVLRAGPHCTTEETTKQALILPFLDILGFTSYDPTKVKAEYTADFVGAKNGERVDYALFCHNVPVMFIEAKSYNEDLSNHAPQLARYFNATPEVAVAAITNGKEWRFFTDLKDKNIMDSTPFLRINFSSLDETKIPQLAQFCHDKFQPEALRTLAEESVYLSAFTKVISSSLKDVDSDFVRYIAGRSNIGRQLNQRFIESITPIVKQAVEKAVSEMVVSGLSKQPVMEQLEEPASEMIDETAPVVDPNNSKIVTTYTERLLSEYVSLILGEEVELIAKDTESYFSILYQGKTNRWILRYYDNKQRPSIVIPIELNDENRKEIVRAGLEISGSQIIIDCPENILRLSGIIRDCLEYCQDDENFRVKKK*	phrogs_hmm	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0044	shell	direct	high	1148	0.999	GCA_000016485.1_01006
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	912156	912341	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	31791	31976	GCA_000016485_1_1_972	GCA_000016485_1_1_972	+	1887192	.	.	hypothetical protein	MNINSPAELKAFFITEVLERYAEKTGKALEALADLFMTNEDFRNLIMDEVEVEAKQVVAHI*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0045	shell	direct	high	185	0.995	GCA_000016485.1_01007
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	912731	913042	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	32366	32677	GCA_000016485_1_1_973	GCA_000016485_1_1_973	+	1887192	.	.	hypothetical protein	MATIIVKRDAGSRKFTEKGEILQRGKAGRLERMFDKQRRINAAFEKMVVKESAADRAIKFAANRQKEQFIDIANYHCCKGKPAGTNTVHAVQKRRLGVRELIR*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0046	shell	direct	high	311	0.997	GCA_000016485.1_01008
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	913162	913413	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	32797	33048	GCA_000016485_1_1_974	GCA_000016485_1_1_974	+	1887192	.	.	hypothetical protein	MKNKITDLNNHLFSQLEKLLDEDLTDEELNREIKRANAVSGIAANIIASNAISLKAMTLFENRQIERESPDFLRISKAQGDDL*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0047	shell	direct	high	251	0.996	GCA_000016485.1_01009
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	913403	914434	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	33038	34069	GCA_000016485_1_1_975	GCA_000016485_1_1_975	+	1887192	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTSNAERFKFTDEHIAFIRLHWDKKPSDLIKLFQQQFDLLINRNVFYKLKKKHNIPSLKHANRYSKEELAFIKANCTLNERILAQKMEVYFNKPFNPHALKVLRVKRQWLTGRSGRFEKGENLKPIGFERYCKNAKCWLIKASIKRYERKSHYLWRKAGRKIPRGHIIDYKDGNSRNCTLENLELISRVEMAWRKKLQYHQLNDEIKPTFSAFVKLKEGINQRKKEKDMEENQSPNIATQEPTTFTFEFTEHELQTMAWAWFALLRGTELCQVLHPALKQIGSHYAASVYDIAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKYLRAYDPKKTGFQLEIL*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0048	shell	direct	high	1031	0.999	GCA_000016485.1_01010
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	914525	915256	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	34160	34891	GCA_000016485_1_1_976	GCA_000016485_1_1_976	+	1887192	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKTELFNDHFQNYKRYHIPKAQLVIADIPYNLGNNAYASNPEWYVNGDNKNGESDKANSSFFDTDKDFRIAEFMHFCSKMLIKEPKERGKAPCMIVFCAFQQISMVIDYAKQHGFKNHIPLVFIKSSSPQVLKANMKVVGATEYALILYRDKLPKFNNNGKMIKNWFEWEKDNRKEIPKLHPTQKPIAVLKRLIEIFTDEGDVVIDPVAGSASTLRAARELNRPSYGFEIKKDSCKIAKRKNA*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0049	shell	direct	high	731	0.999	GCA_000016485.1_01011
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	915277	915621	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	34912	35256	GCA_000016485_1_1_977	GCA_000016485_1_1_977	+	1887192	.	.	hypothetical protein	MKHSKTPLRQEKQSFTHFMKGSEKWLNRICYFLAALIIAMIVGGISLHANAHPTDWHDNELSQQIQQETRCELKGGIYENGVCLPPNLTLAAEKELQDYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0050	shell	direct	high	344	0.997	GCA_000016485.1_01012
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	915618	915911	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	35253	35546	GCA_000016485_1_1_978	GCA_000016485_1_1_978	+	1887192	.	.	hypothetical protein	MKPYADHYAQLDAAHQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELNDRMNDYDPD*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0051	shell	direct	high	293	0.997	GCA_000016485.1_01013
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	915924	916844	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	35559	36479	GCA_000016485_1_1_979	GCA_000016485_1_1_979	+	1887192	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0052	shell	direct	high	920	0.999	GCA_000016485.1_01014
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	916819	917469	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	36454	37104	GCA_000016485_1_1_980	GCA_000016485_1_1_980	+	1887192	.	PDB:3SZ4_A	Exonuclease	MEMYQLKAKCSGLADLMVKPKSGNGISATAKSAVRKIVKFDLFGYRDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCDEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKVIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0053	shell	direct	high	650	0.998	GCA_000016485.1_01015
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	917469	917903	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	37104	37538	GCA_000016485_1_1_981	GCA_000016485_1_1_981	+	1887192	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDTKSGDETQQPSKSKEKPDPLSAAAEQDGLDDDIPF*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0054	shell	direct	high	434	0.998	GCA_000016485.1_01016
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	917966	918745	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	37601	38380	GCA_000016485_1_1_982	GCA_000016485_1_1_982	+	1887192	.	.	hypothetical protein	MTEENKEIIAYKGFNQDWTCRGYQYEIGKTYEHKGDVKACKSGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMVKKAVEWIKGKVDWDAAEKSNTGNGSVATNTGYQSVATNTGDLSVATNTGDLSAATNTGDRSVATNTGYQSVATNTGDLSAATNTGDLSAVEVSGKQSIAVALGWQSKAKASIDGAIVCVYRNHEGELIHIKASKVGENNIKADTWYTLDEIGKFVEVKDD*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0055	cloud	direct	high	779	0.999	GCA_000016485.1_01017
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	918851	919762	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	38486	39397	GCA_000016485_1_1_983	GCA_000016485_1_1_983	+	1887192	.	PRK00321	recombination associated protein; Reviewed	MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQADGRILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQAFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLKFVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0056	shell	direct	high	911	0.999	GCA_000016485.1_01018
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	919759	920004	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	39394	39639	GCA_000016485_1_1_984	GCA_000016485_1_1_984	+	1887192	.	.	hypothetical protein	MRLLKRLAEKVLIDDLRRLDKHIDKSIELHELKLRKLGELIKSLEAENNQLKRENATLETELRAIKQERIFSKRKKKSKRK*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0057	shell	direct	high	245	0.996	GCA_000016485.1_01019
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	920001	920360	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	39636	39995	GCA_000016485_1_1_985	GCA_000016485_1_1_985	+	1887192	.	.	hypothetical protein	MNEINIKLPLHKFQNLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWASDRNNAFHKLDYDSWEELFDWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0058	shell	direct	high	359	0.997	GCA_000016485.1_01020
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	920368	921642	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	40003	41277	GCA_000016485_1_1_986	GCA_000016485_1_1_986	+	1887192	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLGKPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIAGLRNSLDDERGNLTLMLIHILEAIDYVRYQDGKQPCILLWENVPGVLSTKDNAFGHFLAGLAQEREPLQPAGARWANSGYVHSARTIAWRILDAQYFGVAQRRRRVFVVASARPRSVAQILIERKSLCGDIETGKSAEKNITAYTESSFGTYIRSTVGGVVTASGGALGGGSEILVVHGTQDPIISSTTAHCLGRNGGRENILFDIAHRSDVVRIQDDDTTPTLTARMGTGGNNIPCIALAGNTIGRQPHNGGNGNGFDDSGVSYTLTTTDIHGVFNGLTVRKLTPSECEKLQGFPPGYTQIPYRNKLANDCPDSPRYKAIGNSMAVPVIKWIGERMINYLNK*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0059	shell	direct	high	1274	0.999	GCA_000016485.1_01021
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	921693	922214	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	41328	41849	GCA_000016485_1_1_987	GCA_000016485_1_1_987	+	1887192	.	.	hypothetical protein	MKEFNLDAALNGEPVKLRNGLKAIVYYRIPDEFSYPGGSTEIYPLLGIIFNKDGTIKGASENWKDCGAYCSCQGGLDIVGMWEEHKLTSEQVLEKAYKENFLVLCDGNPDLPLKVIAKTKNGEFVMQPEDGIIQPWLANLTMEWFFVKNLIQNSTQALYLSRLNHILAMSFSI*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0060	shell	direct	high	521	0.998	GCA_000016485.1_01022
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	922349	922765	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	41984	42400	GCA_000016485_1_1_988	GCA_000016485_1_1_988	+	1887192	.	.	hypothetical protein	MDIINLIKQQTPEERQTLFNEFIKLLNQKREYVDIPERIVCSACQVFVDERDGTNEDGGEIIHEVYGLRHYDPFMRKQIKELEKQYKYALLDWEQGFLTNKGRFVGRKEAMEIAKAQNQVIRLSGSPNSDILFSEDLY*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0061	shell	direct	high	416	0.998	GCA_000016485.1_01023
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	922837	923370	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	42472	43005	GCA_000016485_1_1_989	GCA_000016485_1_1_989	+	1887192	.	.	hypothetical protein	MFGAVVRDENEIGEDMKVLDEHILEYIWDETLDRIAQHTLVTYIGGSVGTYSDDHAEKRAEDFAILGVSQLIAGSGLSGSQFRRRVKKLMAQGVLLQRVGPNSFVINSEVVKNVAVQAARCWRSIGVPYGMDDTGRACKTLPINALPRSIFELKTNCYRILRSEYPSYKGKGVGNEQ*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0062	shell	direct	high	533	0.998	GCA_000016485.1_01024
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	923360	923683	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	42995	43318	GCA_000016485_1_1_990	GCA_000016485_1_1_990	+	1887192	.	.	hypothetical protein	MSNEITQKVRITIEVEMDDYQRDQLKISKNTQVLGGNIVRLDWEGGVFNEVDGYRKLFNAVDSNLMGIAFDNMEDEDFIDELQLAIKRVVTPIIKAKRKAILEDENE*	.	hypothetical_protein	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0063	shell	direct	high	323	0.997	GCA_000016485.1_01025
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	923676	924020	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	43311	43655	GCA_000016485_1_1_991	GCA_000016485_1_1_991	+	1887192	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSENNGWIKCTESLPEPGIKCLVFDAETQCVSMNFLMKDAKWYVGYNIKHWMPLPKPPNDETSANIADKLKALQSNPDKEVAHNQADKILCDLLNSLGYHDVVKEFENLEKWYA*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0064	cloud	direct	high	344	0.997	GCA_000016485.1_01026
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	924284	925309	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	43919	44944	GCA_000016485_1_1_992	GCA_000016485_1_1_992	+	1887192	.	PDB:1Z19_B	Integrase	MPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVEQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMTWDKINFANKMAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0065	shell	direct	high	1025	0.999	GCA_000016485.1_01027
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	925743	926204	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	45378	45839	GCA_000016485_1_1_993	GCA_000016485_1_1_993	-	1887192	.	PRK10802	peptidoglycan-associated lipoprotein Pal. 	MNKFVKSLLVAGSVAALAACSSSNNDAAGNGVAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0066	persistent	direct	high	461	0.998	GCA_000016485.1_01030
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	926228	927511	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	45863	47146	GCA_000016485_1_1_994	GCA_000016485_1_1_994	-	1887192	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKLLKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVGSAPEDISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEVNPEAWSNIGIDAIVIGQVVPSGNGYSITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGYNQFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGSRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGNATAVGGRGSAQISADGKTLVMINGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKASLPGSDGQVKFPAWSPYLTK*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0067	persistent	direct	high	1283	0.999	GCA_000016485.1_01031
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	927553	928785	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	47188	48420	GCA_000016485_1_1_995	GCA_000016485_1_1_995	-	1887192	.	PRK09510	cell envelope integrity inner membrane protein TolA; Provisional	MQNNRQKKGINAFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKKGQSDKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEIKKQQEQARQEALEKQKQAEEARAKQAAEAAKLKADAEAKRLAAAAKQAEEEAKAKAAEIAAQKAKQEAEAKAKLEAEAKAKAVAEAKAKAEAEAKAKAAAEAKAKAEAEAKAKAEAKAKAEAKAKAEAEAKAKAEAEAKAKAAAEAKAKADAEAKAATEAKRKADQASLDDFLNGGDIGGGSASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGKVCRIKIQLGRDGTILGYQKISGSDDICSAALSAVARTKKVPAAPSDEIYEKYKSPIIDFDIR*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0068	persistent	direct	high	1232	0.999	GCA_000016485.1_01032
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	928801	929220	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	48436	48855	GCA_000016485_1_1_996	GCA_000016485_1_1_996	-	1887192	.	PRK11024	colicin uptake protein TolR; Provisional	MARRQRKAIKSEINIVPFLDVLLVLVLIFMATAPIISQSVQVELPDSVQSQEVSNEDKVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIKSVGLMTNPI*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0069	persistent	direct	high	419	0.998	GCA_000016485.1_01033
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	929291	929623	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	48926	49258	GCA_000016485_1_1_997	GCA_000016485_1_1_997	-	1887192	.	PFAM:PF12297.7	Ellis-van-Creveld-protein-2-like-protein	MRLKVWKTEFHFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFGKAPH*	common_virus_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0070	persistent	direct	high	332	0.997	GCA_000016485.1_01034
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	929565	929978	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	49200	49613	GCA_000016485_1_1_998	GCA_000016485_1_1_998	-	1887192	.	PRK10801	Tol-Pal system protein TolQ. 	MTAELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDLNKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIESLENRVPFFSHSGIC*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0071	persistent	direct	high	413	0.998	GCA_000016485.1_01035
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	929995	930405	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	49630	50040	GCA_000016485_1_1_999	GCA_000016485_1_1_999	-	1887192	.	TIGR02799	tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import of certain organics but also in the maintenance of outer membrane integrity (by an unknown mechanism).	MLDNCFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVVKTLAIDYCVAAKLDDLLMVETEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMKPVAFPKEVKAAFHHLK*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0072	persistent	direct	high	410	0.998	GCA_000016485.1_01036
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	930732	932024	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	50367	51659	GCA_000016485_1_1_1000	GCA_000016485_1_1_1000	+	1887192	.	COG1199	Rad3-related DNA helicase [Replication, recombination and repair]. 	MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVVEAGTGTGKTFAYLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAEDSPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIASQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRGNWRELYRQSAVKKSFELLQEKIDFLAEVIKLALGRSQTLDSIFERVESIKIQLKRLSETNIVGYCYWYEGNGRQLGLHITPLTVADKFGAQLEAKEAAWIFTSATLEVGGTFNHFCQRLGIENATQKNFI*	mmseqs_cdd	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0073	persistent	direct	high	1292	0.999	GCA_000016485.1_01037
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	931999	932655	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	51634	52290	GCA_000016485_1_1_1001	GCA_000016485_1_1_1001	+	1887192	.	PDB:2VL7_A	XPD;-HELICAS	MRHKKILYSPFNYPEQSLLCVPRYLPNTNQVNTLNSLGEMLLPVIEANKGRCFVLCTSYSMMRGLAEYFRKKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFTAPDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK*	rep_hall_hmm	common_virus	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0074	persistent	direct	high	656	0.998	GCA_000016485.1_01038
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	932668	933378	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	52303	53013	GCA_000016485_1_1_1002	GCA_000016485_1_1_1002	+	1887192	.	COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB [Translation, ribosomal structure and biogenesis]. 	MQNLTLLALDTSTEACSVALLYRGEKTHINELAQRTHTKRILPMIDEILANSGLGLNQVDALAFGRGPGSFTGVRVGAGIAQGLAFGADLPVIPISNLTAMAQAAFELHQAENVVAAIDARMNEVYFSQVVREKVRSDFGEVFQWREIISEQVCSPEQAINQLQNDNAFRVGTGWAAYSQFTEKNLTGSDIALPNALYMLELARVEYLQKHTISALEIEPIYLRNEVTWKKLPGRE*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0075	persistent	direct	high	710	0.999	GCA_000016485.1_01039
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	933403	933954	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	53038	53589	GCA_000016485_1_1_1003	GCA_000016485_1_1_1003	+	1887192	.	TIGR00752	outer membrane lipoprotein, Slp family. Slp superfamily members are present in the Gram-negative gamma proteobacteria Escherichia coli, which also contains a close paralog, Haemophilus influenzae and Pasteurella multocida and Vibrio cholera. The known members of the family to date share a motif LX[GA]C near the N-terminus, which is compatible with the possibility that the protein is modified into a lipoprotein with Cys as the new N-terminus. Slp from Escherichia coli is known to be a lipoprotein of the outer membrane and to be expressed in response to carbon starvation. [Cell envelope, Other]	MKGKITLFFTALCFGLTGCIAPPKGLEKERFSINSYREISPQDLTCHCKTVRLGGKIVNTTVLANQTKIEVLSLPVSSISGKPFVELQSDGRFIVYFNGFVEPENLKERYITVGGQLAGTEKGKIEQADYTYPVVQADKYRIWTLSTTYDYPTDDWDEDDDWGFFRWRYRPWYVQPEIRYYLN*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0076	persistent	direct	high	551	0.998	GCA_000016485.1_01040
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	933996	934355	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	53631	53990	GCA_000016485_1_1_1004	GCA_000016485_1_1_1004	+	1887192	.	PRK08974	long-chain-fatty-acid--CoA ligase FadD. 	MEKIWFQNYPEGSEKFLDTSKYESILDMFDKAVREHPDRPAYINMGQVLTFRKLEERSRAFAAYLQNEFKLQRGDRVALMMPNLLQYPIALFWYFTGWLNCSKCQSSLHTERIRAPVAR*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0077	cloud	direct	high	359	0.997	GCA_000016485.1_01041
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	CDS	934345	935685	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	53980	55320	GCA_000016485_1_1_1005	GCA_000016485_1_1_1005	+	1887192	.	PRK08974	long-chain-fatty-acid--CoA ligase FadD. 	MQDSGAVAIVVVSNFASTLEKVVFNTNVKHVILTRMGDQLSFGKRTLVNFVVKYVKKLVPKYKLPHAVTFREVLSIGKYRQYVRPEISREDLAFLQYTGGTTGVAKGAMLTHGNIITNVFQAKWIAEPFIGDHSRTRSAILALPLYHVFALTVNCLLFLELGITAILITNPRDIEGFVKELKKYRFEAITGVNTLFNALLNNENFKEVDFSALKLSVGGGMAIQQSVATRWHELTGCNIIEGYGMTECSPLIAACPINVVKHNGTIGVPVPNTDIKIIKDDGSDAKIGEAGELWVKGEQVMRGYWQRPEATSEVLKDGWMATGDIVIMDESYSLRIVDRKKDMILVSGFNVYPNEIEDVVMLNYKVAEAVAIGVPHAVSGETIKIFVVKKDDSLTRDELRNHCRQYLTGYKVPKEIEFRDELPKTNVGKILRRVLRDEEIAKRPKH*	mmseqs_cdd	nonviral_gene	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_CDS_0078	persistent	direct	high	1340	0.999	GCA_000016485.1_01042
GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote	cenote	tRNA	766834	766920	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C49	7786	7872	tRNA-Ser	tRNA-Ser	-	1887192	.	tRNAscan-SE score: 69.6	Ser	NA	tRNAscan-SE	.	C49	9087	759049	768136	GCA_000016485.1|CP000672.1@region_759050_768136@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	tRNA	925516	925588	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	45151	45223	tRNA-Lys	tRNA-Lys	-	1887192	.	tRNAscan-SE score: 87.4	Lys	NA	tRNAscan-SE	.	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote	cenote	tRNA	925417	925489	GCA_000016485.1	CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485.1_CP000672.1	GCA_000016485.1|CP000672.1	GCA_000016485_1_1	GCA_000016485_1_1@C55	45052	45124	tRNA-Lys	tRNA-Lys	-	1887192	.	tRNAscan-SE score: 71.8	Lys	NA	tRNAscan-SE	.	C55	55320	880366	935686	GCA_000016485.1|CP000672.1@region_880367_935686@tool_cenote_tRNA_0001	.	.	.	.	.	.