core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	14391	15647	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	1	1257	GCA_000018965_1_1_14	GCA_000018965_1_1_14	-	2184682	.	PFAM:PF01610.16	Transposase	MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILNKLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0001	persistent	direct	high	1256	0.999	GCA_000018965.1_00014
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	15871	16350	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	1481	1960	GCA_000018965_1_1_15	GCA_000018965_1_1_15	+	2184682	.	.	hypothetical protein	MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRKYDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0002	persistent	direct	high	479	0.998	GCA_000018965.1_00016
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	22377	22583	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	7987	8193	GCA_000018965_1_1_16	GCA_000018965_1_1_16	-	2184682	.	PFAM:PF01610.16	Transposase	MMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIDHQLSISTSTVIRKINDFHFEHDFSRLPEIMS*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0003	shell	direct	high	206	0.995	GCA_000018965.1_00023
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	22900	23136	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	8510	8746	GCA_000018965_1_1_17	GCA_000018965_1_1_17	+	2184682	.	NF038388	sigma(X)-activator ComW. The pneumococcal DNA-binding protein ComW, critical for natural transformation, interacts with the sigma factor that is a master regulator for competence, sigma(X).	MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRRDFIVYHYRVAYRLYLEKLVMNRGFISC*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0004	persistent	direct	high	236	0.996	GCA_000018965.1_00024
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	23325	24653	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	8935	10263	GCA_000018965_1_1_18	GCA_000018965_1_1_18	+	2184682	.	PRK01117	adenylosuccinate synthetase; Provisional	MYVRKEEPEGSDKIMTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVIDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDSQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0005	persistent	direct	high	1328	0.999	GCA_000018965.1_00025
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	24895	26043	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	10505	11653	GCA_000018965_1_1_19	GCA_000018965_1_1_19	-	2184682	.	PDB:1XO0_A	Recombinase	MKYNKTKYPNIYYYETAKGKRYYVRRSFFFRGKKREKSKSGLTTLPQARAALVELEQQIQEQELGINTNLTLDQYWDIYSEKRLSTGRWNDTSYYLNDNLYKNHIKAKFGSTLLKNLDRNEYELFIAEKLQNHTRYTVQTLNSSFMALLNDAVKNGNLLSNRLKGVFIGQSDIPAANKKVTLKEFKTWIAKAEEIMPKQFYALTYLTIFGLRRGEVFGLRPMDITQNDSGRAILHLRDSRSNQTLKGKGGLKTKDSERYVCLDDIGTDLIYYLIAEASKIKRKLGIIKEQHKDYITINEKGGLINPNQLNRNFNLVNEATGLHVTPHMMRHFFTTQSIIAGVPLEQLSQALGHTKVYMTDRYNQVEDELAEATTDLFLSHIR*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0006	shell	direct	high	1148	0.999	GCA_000018965.1_00027
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	26215	27129	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	11825	12739	GCA_000018965_1_1_20	GCA_000018965_1_1_20	-	2184682	.	3K2Y_B	uncharacterized protein lp_0118	MKIGMRKPSLTRSLKARTTSKWKRQAKKAIIPGYGKKGMGWVKNPKKAMYNKVYHKTTFGLSDLFKSSKKRKKKVVNNKQQSILASNGKKQHTPKEYKEAGLVFMFLGAIFLFLFPPLGFFLFITGFITYIIGRLTAKREKKKKVENYSPQIDTIVFRDDFLLMGTNYHQEEAEIAADFLSKGVHYFGKDNKSLKSYMLETYKPVYKYNKLKTVDVQLLPEPSNPHDKNAVKVLVNNIFVGYLPAMIATQVSSYISNPNYRYDAILTGRGGPYKTLNIETERVVSRKSDLTYYLDLTVWRLAKK*	hhsuite_tools	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0007	cloud	direct	high	914	0.999	GCA_000018965.1_00028
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	27141	27524	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	12751	13134	GCA_000018965_1_1_21	GCA_000018965_1_1_21	-	2184682	.	PDB:3DTE_A	IrrE-protein	MTEKEIISHFQVRIVDFDGELIPDELGFYEKETNTAFLSNKLSKKERVKVLLHELGHKDHTRSEYQNARLRCENEADRNMIHHLVKDALESLDDPTEFDYLKFMSYYNLKTVTNEIMVKEEYKSLVG*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0008	shell	direct	high	383	0.997	GCA_000018965.1_00029
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	27537	27926	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	13147	13536	GCA_000018965_1_1_22	GCA_000018965_1_1_22	-	2184682	.	PDB:1PRA_A	Repressor-protein	MLRKVDKSMFPTYEKIKELAKKQGLSINALEEKLGYSRNTLYSLKKQKASTERMQEIADYFNVSLDYLLGRTDNPAIAGNSKEYTWQGKTLNVEEMASNVMMFGGRELTDEKKKIIQSIIEGYLKEAGD*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_000018965.1_00030
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	28188	28334	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	13798	13944	GCA_000018965_1_1_23	GCA_000018965_1_1_23	+	2184682	.	.	hypothetical protein	MNEEDLKELLELLATDYGRGYLDGVVGGLSMLLKISKEAEKYRKEKYE*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0010	cloud	direct	high	146	0.993	GCA_000018965.1_00031
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	28327	28530	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	13937	14140	GCA_000018965_1_1_24	GCA_000018965_1_1_24	+	2184682	.	PFAM:PF10078.8	transcriptional-repressor	MSKELKIIKAKIKTRLIELDMTQAELAKQVPVTSSVISELLKYGKGSESVKEKVADVLGIENPWRNH*	phrogs_hmm	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0011	shell	direct	high	203	0.995	GCA_000018965.1_00032
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	28542	28676	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	14152	14286	GCA_000018965_1_1_25	GCA_000018965_1_1_25	+	2184682	.	.	hypothetical protein	MQAKIILNWQKKNHQLSQMMIDSLEGLDVWETILTLGKVRRGIL*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0012	cloud	direct	high	134	0.993	GCA_000018965.1_00033
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	28673	29386	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	14283	14996	GCA_000018965_1_1_26	GCA_000018965_1_1_26	+	2184682	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQATMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKTFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMKLNSFDEV*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0013	shell	direct	high	713	0.999	GCA_000018965.1_00034
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	29398	29655	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	15008	15265	GCA_000018965_1_1_27	GCA_000018965_1_1_27	+	2184682	.	PFAM:PF09035.9	Excisionase	MDNVLLSLSEWIKSIIKDTITRLVEIEKDSDHYPELMDVNTTCEFLGIKYATFSDNYRYLKGFPKELPGKKWSKRAIKEWLSNQI*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0014	shell	direct	high	257	0.996	GCA_000018965.1_00035
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	29741	30061	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	15351	15671	GCA_000018965_1_1_28	GCA_000018965_1_1_28	+	2184682	.	.	hypothetical protein	MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQVRNHAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPELLALPEPKQSAIRFL*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0015	shell	direct	high	320	0.997	GCA_000018965.1_00036
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	30077	30376	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	15687	15986	GCA_000018965_1_1_29	GCA_000018965_1_1_29	+	2184682	.	.	hypothetical protein	MEELIESLDNLIMIVKGLEGRESTSRHFITIWENDYKNLLLVKEYLTDYEKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGGRLWR*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0016	shell	direct	high	299	0.997	GCA_000018965.1_00037
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	30367	31155	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	15977	16765	GCA_000018965_1_1_30	GCA_000018965_1_1_30	+	2184682	.	PFAM:PF09681.9	replisome-organiser	MALKNKRYFWIQLAQDFFKSKEMKLLRKIAGGDTHTIIYLKMMLISLEDGGHIYYDGLADNLAEEIALVIDENVEDIKITLIFLESKGLLTRNSDRDYFLEQVPEMVGSETASTRRSRKHRELQKLHCNTIATTCNGDIDIDKEIEKDKNNKVMTSSSLSENLKHSGIRINDKQHQQLLEYVGIDGMNFDMLNRAIEITSEIHQPSFKYLRGILENWKKKGFTSIEQVDENDQKYKEGKNYSRPGQQNDKTSEQEVRDEWGF*	rep_hall_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0017	cloud	direct	high	788	0.999	GCA_000018965.1_00038
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	31143	31301	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	16753	16911	GCA_000018965_1_1_31	GCA_000018965_1_1_31	+	2184682	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLANQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0018	shell	direct	high	158	0.994	GCA_000018965.1_00039
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	31295	32065	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	16905	17675	GCA_000018965_1_1_32	GCA_000018965_1_1_32	+	2184682	.	PDB:4M4W_K	Replicative-helicase	MVDNVFDEIALSYHRNTEQQKELCDKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLVFAKRICREWFEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKQYF*	rep_hall_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0019	shell	direct	high	770	0.999	GCA_000018965.1_00040
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32080	32274	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	17690	17884	GCA_000018965_1_1_33	GCA_000018965_1_1_33	+	2184682	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISCSEEKKAMRFVSRGAAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0020	shell	direct	high	194	0.995	GCA_000018965.1_00041
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32274	32501	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	17884	18111	GCA_000018965_1_1_34	GCA_000018965_1_1_34	+	2184682	.	.	hypothetical protein	MLELYFVYNGHCKFYLGTFDNVDDLIEQMEDHQWVFSAITHPRFQKHIGQRTTRFDYGSKDCYYLATFSGGEKND*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0021	shell	direct	high	227	0.996	GCA_000018965.1_00042
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32494	32598	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	18104	18208	GCA_000018965_1_1_35	GCA_000018965_1_1_35	+	2184682	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIELIKEFGMAILWLFLGYLVGERAARKEKKDDQ*	phrogs_hmm	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0022	shell	direct	high	104	0.99	GCA_000018965.1_00043
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32628	32792	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	18238	18402	GCA_000018965_1_1_36	GCA_000018965_1_1_36	+	2184682	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKEQYGQGRPDYIEALNDLDGLVEVSYREAIERFLEDEL*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0023	shell	direct	high	164	0.994	GCA_000018965.1_00044
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32782	32991	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	18392	18601	GCA_000018965_1_1_37	GCA_000018965_1_1_37	+	2184682	.	.	hypothetical protein	MNYDKRTVIDGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRRKAEELEDDGRVKEKS*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0024	cloud	direct	high	209	0.995	GCA_000018965.1_00045
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	32966	33280	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	18576	18890	GCA_000018965_1_1_38	GCA_000018965_1_1_38	+	2184682	.	.	hypothetical protein	MEELKKKVNAVYNWTVEDGKPQPPQQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWVGYSPGMSQVVIAVYLIYGGN*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0025	shell	direct	high	314	0.997	GCA_000018965.1_00046
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	33282	33791	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	18892	19401	GCA_000018965_1_1_39	GCA_000018965_1_1_39	+	2184682	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIEKYKKLEGVWNAEGAELARQIFLQDLEQLDKPKPVKVPQCVAEYIEFKKKNNFHVYGAMRVIEDHYDKKVPEWFYENNIEKFCLAWLDGYEVEKEKRYFVKIKGNIKENMLGYGELLKRYFFTKSFSLDDVIYSHTRKELEDANFGWVFDCEGIDIEEVENE*	mmseqs_cdd	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0026	cloud	direct	high	509	0.998	GCA_000018965.1_00047
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	33784	34374	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	19394	19984	GCA_000018965_1_1_40	GCA_000018965_1_1_40	+	2184682	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKDLIETPRFNFFIGDEVLLKGKIVGFDVDENKCVENVVRLEYGQTLNVPNNNIYITDDIVDKSKIKVVVPQFVADWYEENKDSFEFNVCDWIAFRDEAKKSENREFNNWINNSRENPIQTLVNMNQFGYEVEEEKRYLVTLKNRQPLVKSQSGSTLYFSQDITARNYKGTQKELEDANFGWVFDCPGIEIEEVE*	mmseqs_cdd	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0027	cloud	direct	high	590	0.998	GCA_000018965.1_00048
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	34374	34535	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	19984	20145	GCA_000018965_1_1_41	GCA_000018965_1_1_41	+	2184682	.	.	hypothetical protein	MSLTLNSTIGDLVLAIGEIIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVIN*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0028	cloud	direct	high	161	0.994	GCA_000018965.1_00049
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	34679	35068	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	20289	20678	GCA_000018965_1_1_42	GCA_000018965_1_1_42	+	2184682	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRVWHYELGRLMSVKCMFFQDSEIEEFELNDALMNDYITAYPDEIELMQSTGLKDKNGKEVFIGDIVKCTRGCLHEVYLEKEYGGTFIGGMPSIYLKGLLNGYAWTEDEEIIGNVYENPELLEDK*	mmseqs_cdd	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0029	cloud	direct	high	389	0.997	GCA_000018965.1_00050
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	35068	35304	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	20678	20914	GCA_000018965_1_1_43	GCA_000018965_1_1_43	+	2184682	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLFGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0030	cloud	direct	high	236	0.996	GCA_000018965.1_00051
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	35297	35473	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	20907	21083	GCA_000018965_1_1_44	GCA_000018965_1_1_44	+	2184682	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYQGDVFITLGTLAEISKETGIAERMLKYYTFASTQRRNPNGRAVVKIEVDDE*	phrogs_hmm	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0031	cloud	direct	high	176	0.994	GCA_000018965.1_00052
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	35466	35696	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	21076	21306	GCA_000018965_1_1_45	GCA_000018965_1_1_45	+	2184682	.	PDB:2FJR_A	Repressor-protein-CI	MNDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAQWEKEESVPDIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0032	cloud	direct	high	230	0.996	GCA_000018965.1_00053
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	35769	36197	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	21379	21807	GCA_000018965_1_1_46	GCA_000018965_1_1_46	+	2184682	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVVRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0033	cloud	direct	high	428	0.998	GCA_000018965.1_00054
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	36487	37053	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	22097	22663	GCA_000018965_1_1_47	GCA_000018965_1_1_47	+	2184682	.	CDD:cd01192	site-specific-tyrosine-recombinase	MKKVEPIRDLDDIERIKDYLKNKSDRNYVLFMFGIYSGLRVSDIVPLQVKQVIADRIELKEKKTGKIRYFPISPPLRKEINRYIKDNQLAEYDYLFPSKKKKRTDGVRITHIGRVAVYQILQDAAKYVGLNHIGTHSMRKTFGYHHYKKNSNVAILQKIFNHSTPDITLGYIGYSQDELDQSILSFDY*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0034	cloud	direct	high	566	0.998	GCA_000018965.1_00055
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	37287	37631	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	22897	23241	GCA_000018965_1_1_48	GCA_000018965_1_1_48	+	2184682	.	pfam01844	HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	MNTNPLRADRSGPHRVAFEKNKKIILKTRNTCGICGQPVDKDLRYPHPLSPVIDHIVPVNKNGHPSDIANLQLAHWQCNRQKSDKLYADEKTNGTNVIGNRNLPQSTDWFKYKG*	mmseqs_cdd	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0035	cloud	direct	high	344	0.997	GCA_000018965.1_00056
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	37770	39074	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	23380	24684	GCA_000018965_1_1_49	GCA_000018965_1_1_49	+	2184682	.	PDB:2JES_G	Portal-Protein	MTLKGMGYLRKKLANYKMGVDTRYNQYAMQHNEIDVGITIPPQIRQQYRAVLGWAAKGVDSLADRLVFREFANDEFGANEIFAQNNPDVFFDSAILSALIGSCCFVYISQGDDDDAPRLQVIEASNATGVLDPITGLLTEGYAVLKRDDNGYAVLEAYFTSDVTWFYPKDGKPFAIGNSTGVPLLVPVIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERSDVTAEFYSFPQKYVLGLSQDAEAIDIWKATVSSLLTFTKDDEGDKPNVGQFTTSSMSPFTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGSGLLNVAYVATCLRDEFPYLRKQFNKTVVKWEPLFEADANMLTLIGDGVIKLNQAVPGYMDAETIRDLTGIKGSDKPAPVVKEGTDGGGYRSEPAQENQV*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0036	cloud	direct	high	1304	0.999	GCA_000018965.1_00057
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	39028	40419	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	24638	26029	GCA_000018965_1_1_50	GCA_000018965_1_1_50	+	2184682	.	PFAM:PF06152.10	minor-head-protein	MVEDIVPSLLKKIKSEFEGARLDSEVLKDLLSKLQHSKASYLDANQYAIEIGEILSKALGASLTNETLPDGKMYYNIAQRVLTDVLGRNYELVSDYTEQVQKNLNSEAKIGLTAQVPELNQDRIDGLVNRLASEESFDDVRWLLEEPVVNFTQSIIDDSIQKNAEFQHKSGLQPEIVRKSAYHCCEWCQEVQGTYKYPRVPKDIYRRHQRCRCTVDYDPKSGKVQNVWSKAWSKSDKSDKIEARKNIGIQSEVSQVRKLALQIGITSNPITKSLKKLTEEEIIQAISGGDKTKGSCSSLAFAYIGNKAGYTVLDFRGGKSCVFFGSIDKINMIGSLPGVKMHVAKNTNDFKAVKELLEKAENGKEYYLATGRHAAIIRKNDNLVEYLELQSKFVNGFKPFDDTVLKKRFKAKKSHAVRGHKYDVDSYLIDANSLKDNPEFHNILSFLNTAESKQMKGITGHEK*	phrogs_hmm	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0037	cloud	direct	high	1391	0.999	GCA_000018965.1_00058
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	40409	40648	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	26019	26258	GCA_000018965_1_1_51	GCA_000018965_1_1_51	+	2184682	.	.	hypothetical protein	MKSDYEEVNWSEYCYKENDDDKTWWVDTSWYAKGLMLITFDRKKFYNLFEDYPQNMTSEEIEIFDKENPFWEDFFSDRK*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0038	cloud	direct	high	239	0.996	GCA_000018965.1_00059
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	40701	40931	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	26311	26541	GCA_000018965_1_1_52	GCA_000018965_1_1_52	+	2184682	.	.	hypothetical protein	MGNTIYFLEKKSSLERGASVKEILEENLEASHDYTSVLVVSLDKDGEINLGYSWDSSLQALGMLDVAKNYILNVIN*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0039	cloud	direct	high	230	0.996	GCA_000018965.1_00060
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	40982	42394	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	26592	28004	GCA_000018965_1_1_53	GCA_000018965_1_1_53	+	2184682	.	PFAM:PF03354.14	Large-Terminase	MARKKLGNQNPTQSVILKYVKKNSKAKEAVEIYERTGLSCYAWQVNLLTSIMAVDKNGLWVHQKFGYSIPRRNGKSELLYLFELWGLHNGLNILHTAHRISTSHSSFEKVKRYLEKMGYVDGEDFSSIRAKGQERIELFDGGGIVQFRTRTSNGGLGEGFDLLVIDEAQEYTTEQESALKYTVTDSSNPITIMCGTPPTPVSNGTVFTNYRKNCLFGKGKYSGWAEWSVSEEKEIDDVDAWYNSNPSMGYHLNERKIEAELGDDKLDHNVQRLGYWPEYNQKSAISETEWNELCVDSMPDLSGKLFVGVKYGQDGANVALSIAVRTVDERIFVETIDCQSVRNGNDWILDFVKRADVATIVVDGASGQKILDEELKKERMKSVILPTVKEIIVANSMWEQGIYQKTLCHAGQPSLKKITTNCEKRNIGSNGGFGYRSHFADMDISLMDSALLAHWACMTTKPKKKQKISY*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0040	cloud	direct	high	1412	0.999	GCA_000018965.1_00061
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	42470	42940	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	28080	28550	GCA_000018965_1_1_54	GCA_000018965_1_1_54	+	2184682	.	PDB:6B0X_d	Major-Capsid-protein	MKMSEFKTIETQEELDNIVKERIRREREKFSDYDELKKRVSELESENSALKSTVEDDKQTRAGLDAQITELQGQVSNYETANLRTRIALQNGLPYDLADRLQGVDEEALRADAERLAGFMRPATPQAPLRDTEPAIGDDKTMQMKQMLRELQPKGE*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0041	cloud	direct	moderate	464	0.985	GCA_000018965.1_00062
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	42946	43845	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	28556	29455	GCA_000018965_1_1_55	GCA_000018965_1_1_55	+	2184682	.	PDB:3JB5_B	Major-Capsid-protein	MADNAMKTGTLFKPEVVKQLISKVQGKSVLAKLSAQTPIPFNGVEQFIFNLEGNAQIVGEGEQKFGNKAKLTSKVIKPLKFVYQARITDEFKYASEEKQMNFLSAYMDGFAKKIAEAFDLAALHGLEPKSMTDATFRATNSFDGVISGSVVTYDETKIDENIEDAVQQVIARGCEVTGIALSPTAGHALGKLKDADKRAVYPEFRFGQNPDSFYGMKSDINKNLTVTGGTAETDHAIVGDFQNRFKWGYAENIPMEIIEYGDPDGAGRDLKAYNEICLRAEAFIGWGILDEDAFARVKA*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0042	cloud	direct	high	899	0.999	GCA_000018965.1_00063
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	43851	44063	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	29461	29673	GCA_000018965_1_1_56	GCA_000018965_1_1_56	+	2184682	.	cd12935	LEM-like domain of lamina-associated polypeptide 2 (LAP2) and similar proteins. LAP2, also termed thymopoietin (TP), or thymopoietin-related peptide (TPRP), is composed of isoform alpha and isoforms beta/gamma and may be involved in chromatin organization and postmitotic reassembly. Some of the LAP2 isoforms are inner nuclear membrane proteins that can bind to nuclear lamins and chromatin, while others are nonmembrane nuclear polypeptides. All LAP2 isoforms contain an N-terminal lamina-associated polypeptide-Emerin-MAN1 (LEM)-domain that is connected to a highly divergent LEM-like domain by an unstructured linker. Both LEM and LEM-like domains share the same structural fold, mainly composed of two large parallel alpha helices. However, their biochemical nature of the solvent-accessible residues is completely different, which indicates the two domains may target different protein surfaces. The LEM domain is responsible for the interaction with the nonspecific DNA binding protein barrier-to-autointegration factor (BAF), and the LEM-like domain is involved in chromosome binding. The family also includes the yeast helix-extension-helix domain-containing proteins, Heh1p (formerly called Src1p) and Heh2p, and their uncharacterized homologs found mainly in fungi and several in bacteria. Heh1p and Heh2p are inner nuclear membrane proteins that might interact with nuclear pore complexes (NPCs). Heh1p is involved in mitosis. It functions at the interface between subtelomeric gene expression and transcription export (TREX)-dependent messenger RNA export through NPCs. The function of Heh2p remains ill-defined. Both Heh1p and Heh2p contain a LEM-like domain (also termed HeH domain), but lack a LEM domain.	MALYRDTKTGVIISAESILGGDWVPVEDTAPSGADLTVAELKSSLDELGIDYDKSSKKSDLVALYEENKG*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0043	cloud	direct	high	212	0.995	GCA_000018965.1_00064
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	44067	44507	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	29677	30117	GCA_000018965_1_1_57	GCA_000018965_1_1_57	+	2184682	.	PFAM:PF09355.9	head-to-tail-adaptor	MGNFAKIEDLELLWRSLKFDERARAEALLEVVSNSLRVEAEKVGKDLDDMVAESVSFASVAKSVTVDIVARTLMTSTDHEPMTQVSESALGYSFSGSYLVPGGGLFIKDTELKRLGLKKKQRYGAIEIYDLPKRNPCHFSGQGGNW*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0044	cloud	direct	high	440	0.998	GCA_000018965.1_00065
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	44452	44790	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	30062	30400	GCA_000018965_1_1_58	GCA_000018965_1_1_58	+	2184682	.	PFAM:PF10665.8	Minor-capsid-protein	MTYLKGIPVILVDKVEIGNDDFGHPIHRDVEIEVQNVLVAPTSSEDVINQMNLTGKKAEYTLGIPKGDTNKWENREVKFFGRKWRTIGIPQEGIESMIPLSWNRKVMVEVYE*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0045	cloud	direct	high	338	0.997	GCA_000018965.1_00066
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	44783	45019	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	30393	30629	GCA_000018965_1_1_59	GCA_000018965_1_1_59	+	2184682	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MSNMKFQLNSAGVSALLRSSEMQGILREKGQGIAERAGEGFELTVSPGQKRANAKISTTDIKSMARNKKHNILLKAMR*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0046	cloud	direct	high	236	0.996	GCA_000018965.1_00067
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	45016	45351	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	30626	30961	GCA_000018965_1_1_60	GCA_000018965_1_1_60	+	2184682	.	PDB:2LFP_A	tail-completion-protein	MIELVIKKFLDGQLDVPSFFEHKPNMPESYVILEKTGSGGSDYVHSATFAFQSYAPSLQKAAELNEKVKKVVEDLITVNEVSGVHHNSDYNFTDTETKQYRYQAVYDINYF*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0047	cloud	direct	high	335	0.997	GCA_000018965.1_00068
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	45418	45975	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	31028	31585	GCA_000018965_1_1_61	GCA_000018965_1_1_61	+	2184682	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MTTASASNVTAAKPKIGGAVSTAPAGTTLPTNAKTDLDAAFETLGYISDDGLTNANSPESKAIKAWGGQTVLSSQTEKKDTFKYKLIEGLNIEVLKEVYGPDNVSGTLETGITVKANGKELPEHCLVIDTLLKNGYVKRVVIPRGKVSEIGEISYKDGEPIGYELTITALPDNSENTHYEYIQGA*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0048	cloud	direct	high	557	0.998	GCA_000018965.1_00069
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	45981	46256	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	31591	31866	GCA_000018965_1_1_62	GCA_000018965_1_1_62	+	2184682	.	.	hypothetical protein	MEAILKGKTESGFEYKIPKKRLRNFYLMREASKMEKGDFEAAEKLLNLLFGKKQAEEFLSHLDDGDDFIDTEVLFADIKSIFESNKDLKKS*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0049	cloud	direct	high	275	0.996	GCA_000018965.1_00070
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	46268	46654	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	31878	32264	GCA_000018965_1_1_63	GCA_000018965_1_1_63	+	2184682	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MIALDEDALICDLAETYQIYDYKQLPLNQVAVFAYGLRDDSRIKQMMSDQIVPLETTLLASIVDRLSLSLWLKTKDGQKGVNRPASIAELLTKNNKEEGDKRDYLVFESGEDFENYRKALLAKTGGED*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0050	cloud	direct	high	386	0.997	GCA_000018965.1_00071
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	46654	49119	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	32264	34729	GCA_000018965_1_1_64	GCA_000018965_1_1_64	+	2184682	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGKAYVQIIPSAKGISGMIQKEMGGEVASAGVSAGESLGSKMMGAVSGVIAAAGIGKAIGASINEGAALQQSLGGVETLFKDSADKVKGFANEAYKTTGLSANAYMENVTGFSASLLQSLGGDTDKAAETANMAMIDMSDNANKMGTSMESIQLAYQGFAKQNYTMLDNLKLGYGGTKQEMQRLLADAEKLTGVKYDINNLSDVYSAIHTIQENLDITGTTAREAATTFTGSFESMKSAAQNVLGKLSLGEDIQPALQALMETTSTFLFGNLIPMIGNILKQIPILILGGIKGVFSGIFGEGLGSIMGSIVTALGSAFLAFKAFSTVSGLLSGIPAVLTTIKTAVTGLFTVMSANPIGIAIAAIAGLTAGLVYFFTQTETGRQIWSSFVAWIKQAWQGIADFFVNLWSGISEGASTLLDGVVTAWNAVVTFFSDLWVRIQEAASVAWTAITTAVMAIVQPFIDGFMNIWNNISDGLTQIWEGIKMIFQGVWEFIKSIFLGAILIIINLVIGNFNQLGADLSLIWKGIKNSISMIWEGIKTYFSGVVDVIVGYGIAIFENFSTTLSTIWKGLSAAGKAIFDSFAQILSNIWNTIKSVASSAWEGLKSTVLGLIDGLVQGAKNAWESMKQGVRDLVSNVTSIFDGIRNIDLWSAGKAILDGFLGGLKSAWGAVTDFVGGIASWIRDHKGPIEYDRKLLIPAGNAIMQGLDRGLQDRFKDVKKSVSGMAGEISNAFSNDDFGLSGTPTIAKNIEASLAMPSAQIEAKDSQTVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0051	cloud	direct	high	2465	1.0	GCA_000018965.1_00072
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	49119	49817	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	34729	35427	GCA_000018965_1_1_65	GCA_000018965_1_1_65	+	2184682	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLEIKLNMQPFRYQKNVAPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNSLVFTGSVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0052	cloud	direct	high	698	0.999	GCA_000018965.1_00073
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	49814	58726	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	35424	44336	GCA_000018965_1_1_66	GCA_000018965_1_1_66	+	2184682	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNTPLNEAYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKGKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIEYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSFYHEWYGLDVRKKITKYTYSPMAKLLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFSKREKTITDAIELAKAKAEEVKQELSDTINQRFNSFDNGPLKEAKRKAEEALRNAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELDGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAETEIAKQVEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQAGSSRNYFRNSRSRTFTTGGQAVYDYRTFIVPDFWKNSDRFKRDYVRISFDVTFPVALVNDMPAMVHFSAHPWYAYRNLIFKGGTVERQHFEFTIDLSSSSEDYQTNNVFIRFGTNYGFPAGLQVVIENAMLSVGNYFPAYQPAYEDQEDRVSVVESNFKQRADSLDAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKANKSELTQTAEELASKIASVQASGRNLFLNSLFKQDIPKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLEAGVNRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASRIASVKVGGRNYYRDSEKIRTSTRFFSFPLHPYLSQENVGETWTLSFDLKINEGGEIRPLLFYHYQTNRFGLKASADITPSKEWQRFTFTGPVIFPNDDPRYSRGEMALYDHGGNNNYSVRRIKLEKGTLATDWSPAPEDIEGQISTVESTFKQRANSLEAGVNRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELSSKIASVQVGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRSGLHFYHDSQDVANFFGIQQSFAFEGVRGEKVSVSLLVSKDGSDSYSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDIEGQISTVESNFKQRADSLEAGVSRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASRIASVKVGGRNYYRDSEKIRTSTRFFSFPLHPYLSQENVGETWTLSFDLKINEGGEIRPLLFYHYQTNRFGLKASADITPSKEWQRFTFTGPVIFPNDDPRYSRGEMALYDHGGNNNYSVRRIKLEKGTLATDWSPAPEDIEGQISTVESTFKQRANSLEAGVNRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNIEPDFSSRLYQKVTFSAWVKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQAIAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGADNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFVNVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKVAKGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRPGLHFYHDSQDVANFFGIQQSFAFDGIRGEKVSVSLLVSKDGGDSNSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDTDEAIRSVQSQLNGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTGNFEAGSVTTTILDAEAVTAEKLKVDDALIKKLTATDAFIYELISKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA*	hallmark_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0053	cloud	direct	high	8912	1.0	GCA_000018965.1_00074
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	58821	59024	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	44431	44634	GCA_000018965_1_1_67	GCA_000018965_1_1_67	+	2184682	.	.	hypothetical protein	MNTEQLNQALQMTIREMSTTSTDSMITSNILSIQLNEQREENQRLQARVDELEALLDEQTKPADKGE*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0054	shell	direct	high	203	0.995	GCA_000018965.1_00075
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	59027	59377	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	44637	44987	GCA_000018965_1_1_68	GCA_000018965_1_1_68	+	2184682	.	.	hypothetical protein	MAETIQNTDNLLDLTKITEPFDLASALRYMKENGEFIRCKNVSDDFYMYRDVQKRPVIVNGRRQFKDVETVWAFNQWGGTIATINVAVLLNHEFYIMKFDAEGNPDWTVPTVEPKE*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0055	shell	direct	high	350	0.997	GCA_000018965.1_00076
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	59386	59802	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	44996	45412	GCA_000018965_1_1_69	GCA_000018965_1_1_69	+	2184682	.	PFAM:PF05105.11	Bacteriophage-holin	MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLFRKISGVLLLMILIPASVLLPEKTGFAFLYSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0056	shell	direct	high	416	0.998	GCA_000018965.1_00077
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	59806	60141	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	45416	45751	GCA_000018965_1_1_70	GCA_000018965_1_1_70	+	2184682	.	PFAM:PF09682.9	Phage-holin	MQQITEIIIAFATSFLTVAVGGIVKAVKDYLLRKGGEKAVIIAEILAKNAVHAVEQVASETGYKGEEKLAQARAKVRAELTKYNISMTDKDLDTFVESAVKQMNDAWKGQE*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0057	shell	direct	high	335	0.997	GCA_000018965.1_00078
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	60141	61097	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	45751	46707	GCA_000018965_1_1_71	GCA_000018965_1_1_71	+	2184682	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGVQPYRQVHAHSTGNRNSTAQNEADYHYRKDPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNAETYAAVELIESHSTKEEFMADYRLYIELLRNLADEAGLPKTLDTDDLAGIKTHEYCTNNQPNNHSDHVDPYPYLASWGISREQFKQDIENGLSAATGWQKNGTGYWYVHSDGSYPKDKFEKINGTWYYFDGSGYMLSDRWKKHTDGNWYYFDQSGEMATGWKKIAEKWYYFDVEGAMKTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYLKPDGTLADKPEFTVEPDGLITVK*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0058	persistent	direct	high	956	0.999	GCA_000018965.1_00079
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	61235	61414	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	46845	47024	GCA_000018965_1_1_72	GCA_000018965_1_1_72	-	2184682	.	PFAM:PF04936.11	transcriptional-regulator	MREVIQELLDSSMSTSAISQGAGVPWTTVSDLRKGKTSMDKMALLTAEKLYEFATTDKQ*	phrogs_hmm	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0059	shell	direct	high	179	0.994	GCA_000018965.1_00080
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	61556	61711	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	47166	47321	GCA_000018965_1_1_73	GCA_000018965_1_1_73	-	2184682	.	.	hypothetical protein	MKLNKEDWLRLLEKAIDNIPETVTAIASLVTAITVARQNKKRKPKSRQRKR*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0060	shell	direct	high	155	0.994	GCA_000018965.1_00081
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	61966	62433	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	47576	48043	GCA_000018965_1_1_74	GCA_000018965_1_1_74	+	2184682	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MYYTLEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDERLNHRVEVEIGILEDECAAIMQDFFRNRRKK*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0061	persistent	direct	high	467	0.998	GCA_000018965.1_00082
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	62619	63062	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	48229	48672	GCA_000018965_1_1_75	GCA_000018965_1_1_75	+	2184682	.	PRK13956	dUTP diphosphatase. 	MKIRGFELVSSFTDENLLPKRETAHAAGYDLKVAVRTVVAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFATFLIADGDAADGVRTGGFGSTGH*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0062	persistent	direct	high	443	0.998	GCA_000018965.1_00084
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	63022	63579	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	48632	49189	GCA_000018965_1_1_76	GCA_000018965_1_1_76	+	2184682	.	2AXN_A	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type	MAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCATGLPLRVEPLLHEWQVYKTGIENFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYREHQTVVVVAHRMLMRQFVPNEKIDFCQVIECELEI*	hhsuite_tools	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0063	persistent	direct	high	557	0.998	GCA_000018965.1_00085
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	63692	64954	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	49302	50564	GCA_000018965_1_1_77	GCA_000018965_1_1_77	+	2184682	.	PDB:3BH0_A	Helicase-ATPase	MEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPKNSLTGITLPKEIQVIGVTTIQEVLKKVFA*	rep_hall_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0064	persistent	direct	high	1262	0.999	GCA_000018965.1_00086
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	65027	65524	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	50637	51134	GCA_000018965_1_1_78	GCA_000018965_1_1_78	+	2184682	.	cd03379	Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity.  Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	MSYFEQFMQANQAYVALHGQLNLPLKPKTRVAIVTCMDSRLHVAQALGLALGDAHILRNAGGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFENEPFQEYLKEELGVDVSDQDFLPFQDIEESVREDMQLLIESPLIPDDVIISGAIYNVDTGSMTVVEL*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0065	persistent	direct	high	497	0.998	GCA_000018965.1_00087
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	65549	66364	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	51159	51974	GCA_000018965_1_1_79	GCA_000018965_1_1_79	+	2184682	.	COG2339	Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Signal transduction mechanisms]. 	MKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLALFYMIPALYFLFRIGKKWELPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSTFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKSLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIFLGLALGTHFLFNSPFVELETELPLAIPVVTAIALYGFYHAYCFVEKHNELMT*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0066	persistent	direct	high	815	0.999	GCA_000018965.1_00088
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	66509	67477	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	52119	53087	GCA_000018965_1_1_80	GCA_000018965_1_1_80	+	2184682	.	PRK02269	ribose-phosphate diphosphokinase. 	MSFSDLKLFALSSNKELAERVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGKHVFILQSTSSPVNDNLLEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLEVAGVDRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGSDYVVVSPDHGGVTRARKLAEFLKTSIAIIDKRRSVDKMNTSEVMNIIGKVEGKTCILIDDMIDTAGTICHAADALAEAGAVEVYASCTHPVLSGPATDNIQKSAIKKLVVLDTIYLPEERLIDKIEQISIAHLLGDAIVRIHEKRPLSPLFDIEKKI*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0067	persistent	direct	high	968	0.999	GCA_000018965.1_00089
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	67599	67892	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	53209	53502	GCA_000018965_1_1_81	GCA_000018965_1_1_81	-	2184682	.	PFAM:PF01610.16	Transposase	MEQLHFITKLLDIKDPNVQILNIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGIPTRILLRKRRFKCYHCSKMMVAETSDDV*	common_virus_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0068	persistent	direct	high	293	0.997	GCA_000018965.1_00090
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	68019	68252	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	53629	53862	GCA_000018965_1_1_82	GCA_000018965_1_1_82	-	2184682	.	.	hypothetical protein	MFNQLHMREEQVLLAQDYALETARAEGLEQGLERGKVEGRAERKLFAFLDIVRQGLLTSEVASQQLGMSVSEFEALL*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0069	shell	direct	high	233	0.996	GCA_000018965.1_00092
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	68576	68833	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	54186	54443	GCA_000018965_1_1_83	GCA_000018965_1_1_83	-	2184682	.	.	hypothetical protein	MLDLPAKNVTILEGSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVIIEIQVHHQNFFINHLWAYLCSQVNQNLEKIRQREGDTH*	.	hypothetical_protein	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0070	shell	direct	high	257	0.996	GCA_000018965.1_00093
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	69146	71815	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	54756	57425	GCA_000018965_1_1_84	GCA_000018965_1_1_84	+	2184682	.	CDD:cd08642	DNA-Polymerase-I	MVFFDSFLYNGCMDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVAEGLDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFAWSCGDKLYATDKLELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLLSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYDMEQPLAFVLAKMEIAGIMVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADGKIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKSELVEIKKLVKQTMEEAIQLSVPLIADENEGATWYEAK*	rep_hall_hmm	common_virus	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0071	persistent	direct	high	2669	1.0	GCA_000018965.1_00094
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	CDS	71900	72337	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	57510	57947	GCA_000018965_1_1_85	GCA_000018965_1_1_85	+	2184682	.	COG1832	Predicted CoA-binding protein [General function prediction only]. 	MSQEFINPSDGVIRQYLATSKTLAVVGLSDREETTSNRVTKEMQARGYKIIPVNPKAAGGEILGEKAYASLAEIPVPVDIVNVYRRSEFLPDVARDFLKADAKIFWAQLGLESLEAKEILRDGGCDDIVMNRCIKREHTRLIEEA*	mmseqs_cdd	nonviral_gene	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_CDS_0072	persistent	direct	high	437	0.998	GCA_000018965.1_00095
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	tRNA	16444	16515	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	2054	2125	tRNA-Glu	tRNA-Glu	+	2184682	.	tRNAscan-SE score: 61.8	Glu	NA	tRNAscan-SE	.	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	tRNA	18365	18437	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	3975	4047	tRNA-Ala	tRNA-Ala	+	2184682	.	tRNAscan-SE score: 72.7	Ala	NA	tRNAscan-SE	.	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote	cenote	tRNA	21661	21734	GCA_000018965.1	CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965.1_CP000918.1	GCA_000018965.1|CP000918.1	GCA_000018965_1_1	GCA_000018965_1_1@C2	7271	7344	tRNA-Asn	tRNA-Asn	+	2184682	.	tRNAscan-SE score: 70.2	Asn	NA	tRNAscan-SE	.	C2	57947	14391	72338	GCA_000018965.1|CP000918.1@region_14392_72338@tool_cenote_tRNA_0003	.	.	.	.	.	.