core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	502402	503034	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	1	633	GCA_000019425_1_1_470	GCA_000019425_1_1_470	-	4686137	.	PRK09935	fimbriae biosynthesis transcriptional regulator FimZ. 	MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0001	persistent	direct	high	632	0.998	GCA_000019425.1_00510
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	503369	504532	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	968	2131	GCA_000019425_1_1_471	GCA_000019425_1_1_471	-	4686137	.	PDB:1Z19_B	Integrase	MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0002	cloud	direct	high	1163	0.999	GCA_000019425.1_00512
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	504652	504915	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	2251	2514	GCA_000019425_1_1_472	GCA_000019425_1_1_472	-	4686137	.	PDB:3SZ4_A	Exonuclease	MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0003	shell	direct	high	263	0.996	GCA_000019425.1_00513
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	505238	505333	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	2837	2932	GCA_000019425_1_1_473	GCA_000019425_1_1_473	+	4686137	.	PFAM:PF04079.15	Ren-like-exclusion-protein	MTGKEAIIHYLGTHKSFCAQDVAAVTGATVI*	phrogs_hmm	hypothetical_protein	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0004	shell	direct	moderate	95	0.99	GCA_000019425.1_00514
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	505396	505695	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	2995	3294	GCA_000019425_1_1_474	GCA_000019425_1_1_474	+	4686137	.	COG2963	Transposase and inactivated derivatives [Mobilome: prophages, transposons]. 	MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0005	shell	direct	high	299	0.997	GCA_000019425.1_00515
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	505692	506558	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	3291	4157	GCA_000019425_1_1_475	GCA_000019425_1_1_475	+	4686137	.	PDB:4U7B_B	Mos-transposase	MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0006	shell	direct	high	866	0.999	GCA_000019425.1_00516
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	506869	507201	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	4468	4800	GCA_000019425_1_1_476	GCA_000019425_1_1_476	+	4686137	.	PRK09541	EmrE family multidrug efflux SMR transporter. 	MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0007	shell	direct	high	332	0.997	GCA_000019425.1_00517
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	507456	508982	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	5055	6581	GCA_000019425_1_1_477	GCA_000019425_1_1_477	+	4686137	.	PDB:4BQQ_A	Integrase	MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0008	cloud	direct	high	1526	0.999	GCA_000019425.1_00518
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	509447	509998	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	7046	7597	GCA_000019425_1_1_478	GCA_000019425_1_1_478	+	4686137	.	PRK09818	kinase inhibitor. 	MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0009	shell	direct	high	551	0.998	GCA_000019425.1_00519
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	510008	510805	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	7607	8404	GCA_000019425_1_1_479	GCA_000019425_1_1_479	+	4686137	.	smart00342	helix_turn_helix, arabinose operon control protein. 	MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0010	shell	direct	high	797	0.999	GCA_000019425.1_00520
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	511020	511475	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	8619	9074	GCA_000019425_1_1_480	GCA_000019425_1_1_480	+	4686137	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA*	phrogs_hmm	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0011	cloud	direct	high	455	0.998	GCA_000019425.1_00521
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	511475	511645	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	9074	9244	GCA_000019425_1_1_481	GCA_000019425_1_1_481	+	4686137	.	PRK09689	prophage protein NinE; Provisional	MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0012	cloud	direct	high	170	0.994	GCA_000019425.1_00522
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	511638	511928	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	9237	9527	GCA_000019425_1_1_482	GCA_000019425_1_1_482	+	4686137	.	pfam07102	Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA*	mmseqs_cdd	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0013	cloud	direct	high	290	0.997	GCA_000019425.1_00523
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	511925	512287	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	9524	9886	GCA_000019425_1_1_483	GCA_000019425_1_1_483	+	4686137	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0014	shell	direct	high	362	0.997	GCA_000019425.1_00524
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	512287	512424	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	9886	10023	GCA_000019425_1_1_484	GCA_000019425_1_1_484	+	4686137	.	NF033498	YlcG family protein. Members of this family include YlcG from the DLP12 prophage region of Eschichia coli K-12, and homologs from the Gifsy-1 and Gifsy-2 prophage regions of Salmonella enterica subsp. enterica serovar Typhimurium str. LT2. Members of this protein family are small, about 46 amino acids long. YlcG is known to be expressed. It is encoded immediately downstream of the Holliday junction resolvase RusA.	MFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0015	shell	direct	high	137	0.993	GCA_000019425.1_00525
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	512510	512893	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	10109	10492	GCA_000019425_1_1_485	GCA_000019425_1_1_485	+	4686137	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN*	mmseqs_cdd	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0016	shell	direct	high	383	0.997	GCA_000019425.1_00526
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	513035	513253	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	10634	10852	GCA_000019425_1_1_486	GCA_000019425_1_1_486	+	4686137	.	.	hypothetical protein	MLGRQRLPQHIFFVIRLELVNQTYSNDVISAYTECFREGANKRGNSSRLTQSFHFFMFEPIFSPVNALNQPI*	.	hypothetical_protein	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0017	cloud	direct	high	218	0.995	GCA_000019425.1_00527
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	513291	514271	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	10890	11870	GCA_000019425_1_1_487	GCA_000019425_1_1_487	-	4686137	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0018	cloud	direct	high	980	0.999	GCA_000019425.1_00528
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	514312	515379	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	11911	12978	GCA_000019425_1_1_488	GCA_000019425_1_1_488	-	4686137	.	pfam00267	Gram-negative porin. 	MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKEGANKSLI*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0019	shell	direct	high	1067	0.999	GCA_000019425.1_00529
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	515952	516167	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	13551	13766	GCA_000019425_1_1_489	GCA_000019425_1_1_489	+	4686137	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE*	mmseqs_cdd	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0020	persistent	direct	high	215	0.995	GCA_000019425.1_00530
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	516167	516664	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	13766	14263	GCA_000019425_1_1_490	GCA_000019425_1_1_490	+	4686137	.	CDD:cd16900	endolysin-R21-like-protein	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ*	common_virus_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0021	shell	direct	high	497	0.998	GCA_000019425.1_00531
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	516661	517122	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	14260	14721	GCA_000019425_1_1_491	GCA_000019425_1_1_491	+	4686137	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR*	mmseqs_cdd	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0022	shell	direct	high	461	0.998	GCA_000019425.1_00532
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	517154	517447	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	14753	15046	GCA_000019425_1_1_492	GCA_000019425_1_1_492	-	4686137	.	pfam06291	Bor protein. This family consists of several Bacteriophage lambda Bor and Escherichia coli Iss proteins. Expression of bor significantly increases the survival of the Escherichia coli host cell in animal serum. This property is a well known bacterial virulence determinant indeed, bor and its adjacent sequences are highly homologous to the iss serum resistance locus of the plasmid ColV2-K94, which confers virulence in animals. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK*	mmseqs_cdd	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0023	cloud	direct	high	293	0.997	GCA_000019425.1_00533
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	517738	518148	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	15337	15747	GCA_000019425_1_1_493	GCA_000019425_1_1_493	-	4686137	.	pfam07166	Protein of unknown function (DUF1398). This family consists of several hypothetical Enterobacterial proteins of around 130 residues in length. Members of this family seem to be found exclusively in Escherichia coli and Salmonella species. The function of this family is unknown.	MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0024	cloud	direct	high	410	0.998	GCA_000019425.1_00534
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	518434	518640	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	16033	16239	GCA_000019425_1_1_494	GCA_000019425_1_1_494	+	4686137	.	.	hypothetical protein	MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD*	.	hypothetical_protein	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0025	cloud	direct	high	206	0.995	GCA_000019425.1_00535
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	519388	519933	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	16987	17532	GCA_000019425_1_1_495	GCA_000019425_1_1_495	+	4686137	.	CDD:pfam07471	DNA-packaging-protein	MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG*	hallmark_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0026	shell	direct	high	545	0.998	GCA_000019425.1_00536
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	519908	520651	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	17507	18250	GCA_000019425_1_1_496	GCA_000019425_1_1_496	+	4686137	.	CDD:COG5525	Large-Terminase	MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE*	hallmark_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0027	cloud	direct	high	743	0.999	GCA_000019425.1_00537
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	520706	521137	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	18305	18736	GCA_000019425_1_1_497	GCA_000019425_1_1_497	-	4686137	.	.	hypothetical protein	MDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK*	.	hypothetical_protein	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0028	cloud	direct	high	431	0.998	GCA_000019425.1_00539
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	521429	521614	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	19028	19213	GCA_000019425_1_1_498	GCA_000019425_1_1_498	+	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEA*	hallmark_hmm	common_virus	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0029	cloud	direct	high	185	0.995	GCA_000019425.1_00540
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	CDS	522235	522984	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	19834	20583	GCA_000019425_1_1_499	GCA_000019425_1_1_499	+	4686137	.	PRK09940	transcriptional regulator YdeO; Provisional	MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGVTDGINKTID*	mmseqs_cdd	nonviral_gene	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_CDS_0030	cloud	direct	high	749	0.999	GCA_000019425.1_00541
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	626551	627531	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	1	981	GCA_000019425_1_1_595	GCA_000019425_1_1_595	-	4686137	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH*	common_virus_hmm	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0001	cloud	direct	high	980	0.999	GCA_000019425.1_00642
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	627572	628639	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	1022	2089	GCA_000019425_1_1_596	GCA_000019425_1_1_596	-	4686137	.	pfam00267	Gram-negative porin. 	MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKEGANKSLI*	mmseqs_cdd	nonviral_gene	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0002	shell	direct	high	1067	0.999	GCA_000019425.1_00643
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	629212	629427	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	2662	2877	GCA_000019425_1_1_597	GCA_000019425_1_1_597	+	4686137	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE*	mmseqs_cdd	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0003	persistent	direct	high	215	0.995	GCA_000019425.1_00644
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	629427	629924	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	2877	3374	GCA_000019425_1_1_598	GCA_000019425_1_1_598	+	4686137	.	CDD:cd16900	endolysin-R21-like-protein	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ*	common_virus_hmm	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0004	shell	direct	high	497	0.998	GCA_000019425.1_00645
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	629921	630382	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	3371	3832	GCA_000019425_1_1_599	GCA_000019425_1_1_599	+	4686137	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR*	mmseqs_cdd	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0005	shell	direct	high	461	0.998	GCA_000019425.1_00646
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	630414	630707	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	3864	4157	GCA_000019425_1_1_600	GCA_000019425_1_1_600	-	4686137	.	pfam06291	Bor protein. This family consists of several Bacteriophage lambda Bor and Escherichia coli Iss proteins. Expression of bor significantly increases the survival of the Escherichia coli host cell in animal serum. This property is a well known bacterial virulence determinant indeed, bor and its adjacent sequences are highly homologous to the iss serum resistance locus of the plasmid ColV2-K94, which confers virulence in animals. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK*	mmseqs_cdd	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0006	cloud	direct	high	293	0.997	GCA_000019425.1_00647
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	630998	631408	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	4448	4858	GCA_000019425_1_1_601	GCA_000019425_1_1_601	-	4686137	.	pfam07166	Protein of unknown function (DUF1398). This family consists of several hypothetical Enterobacterial proteins of around 130 residues in length. Members of this family seem to be found exclusively in Escherichia coli and Salmonella species. The function of this family is unknown.	MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR*	mmseqs_cdd	nonviral_gene	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0007	cloud	direct	high	410	0.998	GCA_000019425.1_00648
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	631694	631900	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	5144	5350	GCA_000019425_1_1_602	GCA_000019425_1_1_602	+	4686137	.	.	hypothetical protein	MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD*	.	hypothetical_protein	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0008	cloud	direct	high	206	0.995	GCA_000019425.1_00649
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	632648	633193	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	6098	6643	GCA_000019425_1_1_603	GCA_000019425_1_1_603	+	4686137	.	CDD:pfam07471	DNA-packaging-protein	MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG*	hallmark_hmm	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0009	shell	direct	high	545	0.998	GCA_000019425.1_00650
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	633168	633911	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	6618	7361	GCA_000019425_1_1_604	GCA_000019425_1_1_604	+	4686137	.	CDD:COG5525	Large-Terminase	MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE*	hallmark_hmm	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0010	cloud	direct	high	743	0.999	GCA_000019425.1_00651
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	633966	634397	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	7416	7847	GCA_000019425_1_1_605	GCA_000019425_1_1_605	-	4686137	.	.	hypothetical protein	MDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK*	.	hypothetical_protein	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0011	cloud	direct	high	431	0.998	GCA_000019425.1_00653
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	634689	634874	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	8139	8324	GCA_000019425_1_1_606	GCA_000019425_1_1_606	+	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEA*	hallmark_hmm	common_virus	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0012	cloud	direct	high	185	0.995	GCA_000019425.1_00654
GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote	cenote	CDS	635495	636244	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C33	8945	9694	GCA_000019425_1_1_607	GCA_000019425_1_1_607	+	4686137	.	PRK09940	transcriptional regulator YdeO; Provisional	MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGVTDGINKTID*	mmseqs_cdd	nonviral_gene	C33	9694	626551	636245	GCA_000019425.1|CP000948.1@region_626552_636245@tool_cenote_CDS_0013	cloud	direct	high	749	0.999	GCA_000019425.1_00655
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1349815	1351008	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	1	1194	GCA_000019425_1_1_1265	GCA_000019425_1_1_1265	+	4686137	.	PDB:1Z19_B	Integrase	MITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMSITQARERRQQFRNWLTEGLDPREQVKLDKQTRQEAMSVAEAFNYWIERHCIANGLVKVDYYRQVFEKHIAEPMKNVKVDNTAKMHWINVFDSIESRVMAHYMLSLCKRAFRFCVNRSVIASNPLEGLLPSDVGQKPKKRTRRMDDDDLRKIYQWLKSHMSIESVFLVKFIMLTGCRTAEIRLSERSWFRLDDNEWVVPAGSYKTRVHIRRGLSDAAVNLVRNHLKKINTNHLVTSQRKIDGGIKDSPVHSPVASNYARSIWNGTGMAEWSLHDMRRTIATNLSELGCPPHVIEKLLGHQMVGVMAHYNLHDYIDDQKHWLRVWQSHLEEIIGEPFS*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0001	cloud	direct	high	1193	0.999	GCA_000019425.1_01371
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1351244	1351486	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	1430	1672	GCA_000019425_1_1_1266	GCA_000019425_1_1_1266	-	4686137	.	pfam13269	Protein of unknown function (DUF4060). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length. There are two conserved sequence motifs: VEVV and SYVAT.	MMKLINRSKQSPIGRRACDVALAAHLQTYGDYGRSKMKETYTVKVEGVKVWVEVVNRKASYVATAMTGMRRLRSLPGQVG*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0002	cloud	direct	high	242	0.996	GCA_000019425.1_01372
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1351486	1351827	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	1672	2013	GCA_000019425_1_1_1267	GCA_000019425_1_1_1267	-	4686137	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MNAGFRRTLALAGDGDVVYCDPPYEPLPGTAGFTNYAAGGFSWDSQVELAESCVAAHQRGAKVVISNSTAPRVIELYEQHGFNLHRVSARRAISSKGSTRETASDVVATLGVQ*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0003	cloud	direct	high	341	0.997	GCA_000019425.1_01373
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1351913	1352371	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	2099	2557	GCA_000019425_1_1_1268	GCA_000019425_1_1_1268	-	4686137	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MRYGSVCSGAAAMPIEEPALRSWQRPFLKWAGGKYSLLPELDRLIPAGKRLIEPFVGGGSVFLNSDKHERFLLADVSADLINLYQMLAVVPDSVIYEAMKAFRHLNDAENYTLIREAFNAQRLDAVERAAAFLYLNRHCFNGLIRYNLDGFF*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0004	cloud	direct	high	458	0.998	GCA_000019425.1_01374
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1352368	1352520	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	2554	2706	GCA_000019425_1_1_1269	GCA_000019425_1_1_1269	-	4686137	.	pfam07026	Protein of unknown function (DUF1317). This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.	MTHAHDDISVGTLCLPFIGNCWLIPWGEVVSNPLKAQRLAEEYRERQEAA*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0005	cloud	direct	high	152	0.993	GCA_000019425.1_01375
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1352517	1352945	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	2703	3131	GCA_000019425_1_1_1270	GCA_000019425_1_1_1270	-	4686137	.	.	hypothetical protein	MKRTPFYRRPGRAGQFSGLRERVIWMIQTRGRPVTGSEIAEKFGVSLIEFNRVANGITRGTGQIAQIVESEKWINEDGICDRTFDLVTKPKVITPQGKSRLFTRRAIEQSQEGRRQECIERAARRRRLIAQGLYIDEMESIL*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0006	cloud	direct	high	428	0.998	GCA_000019425.1_01376
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1352942	1353622	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	3128	3808	GCA_000019425_1_1_1271	GCA_000019425_1_1_1271	-	4686137	.	PDB:3SZ4_A	Exonuclease	MTPEIILARTGIDVSTVEQGDEAWAKLRLGVITASDAHNVISKPRSGSKWTDMKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYEEDARTLFEFTTDVKVTESPILFRDESMRTACSPDGLCSNGFGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTGKDAWFFANYDPRMKREGIHHVVVERDPQYMSDFNEMVPEFIEKMDEALAEIGFTFGEQWK*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0007	shell	direct	high	680	0.999	GCA_000019425.1_01377
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1353619	1354536	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	3805	4722	GCA_000019425_1_1_1272	GCA_000019425_1_1_1272	-	4686137	.	PFAM:PF03837.13	RecT-protein	MSLTLVDFVKQQEPLFIKAATDERMVWAKESQFAIQLFQNNDYLAKVAFQNQTSTQNAIINVAAIGISLNPAQKLAYLVPRKGAICLDISYMGLMHIAQQSGAIKWCQSAIVRRNDQFRREGLDKPPIHIYNDFDTEEQRGDIVGAYVTVKTDDGDYLTHTMRIDAIYSIRDRSEAWKKYKSDNSKKCPWVTDEEQMILKTVVKQAAKYWPRRERLDAAIDHVNTEGEEGINFSAERQPERDVTPAGDEIIKEINDVLIAMDKTWEENLLPVCSQIFRRDIRDSSELTQAEAVKALGFLKKKAAA*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0008	cloud	direct	high	917	0.999	GCA_000019425.1_01378
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1354546	1354827	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	4732	5013	GCA_000019425_1_1_1273	GCA_000019425_1_1_1273	-	4686137	.	NF033500	host nuclease inhibitor GamL. Members of this family, including GamL from phage phi80, are phage inhibitors of host nucleases such as RecBCD and SbcCD. This family has a distant relationship to Gam (see pfam06064), which inhibits RecBCD.	MNAYLTYDRIEERRWVEQQLTDEKEKWIDDRAKELIAMFPKYALQMSSLFLPKEAQMALVGEKAEEAYNDYVTRICYDRAEEEWDRLHPICPF*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0009	cloud	direct	high	281	0.996	GCA_000019425.1_01379
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1354835	1355803	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	5021	5989	GCA_000019425_1_1_1274	GCA_000019425_1_1_1274	-	4686137	.	.	hypothetical protein	MSEVTDLTVIEIKPEQAPVLYVAGGLDAYLEQIRQAVNEVPDLSTKKGRDRVASLAAQVSRSKTAIEKPGREYLKRLKEAVRPAEAEIKRFVDACDELRDATRRPLTEWEAEQERIKAEEAMNALHAEALEMNIKFDQELAAKFEADHEMALLMNKDFDRDREEQRRLAEQARREHEERIKREAAEQARRDAEAKHKAEIEAAARREAEEKARAELAERQRIEAEQRAEREKKETEERARREKEEAVAAERRRQEEAEAARLVEEQRKAEEEARRAADKEHRRTVNRRVYADLIAQGIPEEYAQKAVLAIAGGKVQDAHIKY*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0010	cloud	direct	high	968	0.999	GCA_000019425.1_01380
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1355908	1356744	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	6094	6930	GCA_000019425_1_1_1275	GCA_000019425_1_1_1275	-	4686137	.	.	hypothetical protein	METKFLSDGRKVVVVGALNNQETIVQEVFVTQQGDEIPGGERFVVKSLHDQPVESWLSREKAKQEKALADAKLKIEKINSEISNLQNTLSFWREMVKQVKAFSDHINDADLDHFADVMTGQVKFAIRRDYGVPSIERYEDFMSSIDNYYGRKKFEGIKCLSLLGSTNGDIALRVNCYSDGSGGSDTVEFYKTIEEARQCVKRIALEKLNGNGLSIDDVKKCRNMGIVFSRDELQKIKERLFSASEKNLAHYQENFDKQVAQINDGKLAIEKMLNEAIN*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0011	cloud	direct	high	836	0.999	GCA_000019425.1_01381
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1356755	1356964	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	6941	7150	GCA_000019425_1_1_1276	GCA_000019425_1_1_1276	-	4686137	.	PRK11354	FtsZ inhibitor protein; Reviewed	MINHYGTTPLIRQCVTPGMMALHEGRTYRVSAVIQERKWVYLHTDAEIIRLSDCVIDVLLDGHGNPLTH*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0012	cloud	direct	high	209	0.995	GCA_000019425.1_01382
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1356961	1357119	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	7147	7305	GCA_000019425_1_1_1277	GCA_000019425_1_1_1277	-	4686137	.	.	hypothetical protein	MTVTHNGKQYTAKKLNDNEWQLTSVSNPREKLTMNRWHMKLAGLLEQVEVKA*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0013	cloud	direct	high	158	0.994	GCA_000019425.1_01383
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1357121	1357330	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	7307	7516	GCA_000019425_1_1_1278	GCA_000019425_1_1_1278	-	4686137	.	.	hypothetical protein	MSDLELGLKIYALWFVGTFLLDIAINSLTKKEHRQPLSKLAIDHVRMSSAITIVGLIVCGMGWFLFKVV*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0014	cloud	direct	high	209	0.995	GCA_000019425.1_01384
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1357486	1357782	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	7672	7968	GCA_000019425_1_1_1279	GCA_000019425_1_1_1279	-	4686137	.	.	hypothetical protein	MIDDIKRIDSMINALRNMKQDIKRQQKLSEINSLDLSPKQAQKRNADADWIAMEQIKRRHELHALSVELGFAERRESYAPFELTDGWHRFDHKPREPQ*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0015	cloud	direct	high	296	0.997	GCA_000019425.1_01385
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1358340	1358549	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	8526	8735	GCA_000019425_1_1_1280	GCA_000019425_1_1_1280	+	4686137	.	.	hypothetical protein	MDLDEERVNMMVHAMGRAVMELSLADLPMTQQNIIDKLERYRKETGNVIGKGVNRDAAEIVRKGSKAVK*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0016	cloud	direct	high	209	0.995	GCA_000019425.1_01386
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1358580	1359446	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	8766	9632	GCA_000019425_1_1_1281	GCA_000019425_1_1_1281	-	4686137	.	.	hypothetical protein	MENTGLHDVNFSLRYDGLDAEKHEIELSSLGESLKGFSKILATAGTFALTQKYSRSTSTQEVKIYATEARANCFSLDTIMNFISQSQLFSGSAGAILGALVPYIFAKNSQKKEEMKYLKEALEKAIEALGNKDKDTISGLISVIDKMASELRPSVRQAVSPIGTTCNKISVTPGNGFKPAVIDEQDKAVIDQLDDDEVLGLREYRIFLTEFDAHRMTAKVIIEGDDSDKRISAQISDPSASKADNPYLISLSRFLSTGLSHESAVKVTAKAAVRKGAISKLFIVDIEL*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0017	cloud	direct	high	866	0.999	GCA_000019425.1_01387
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1359583	1360293	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	9769	10479	GCA_000019425_1_1_1282	GCA_000019425_1_1_1282	-	4686137	.	PDB:2FJR_A	Repressor-protein-CI	MSSISERIKFLLAREGLKQRDLAEALSTSPQTVNNWIKRDALSREAAQQISEKFGYSLDWLLNGEGSPKKDLESNIPPESEWGTVDAWDKNTPLPDDEVEVPFLKDIEFACGDGRVHDEDHNGFKLRFSKATLRRVGANSDGSGVLCFPASGDSMEPVIPDGATVAVDTGNKRVIDGELYAINQGDLKRIKQLYRKPGGKILIRSINRDYDDEEADEADVEIIGFVFWYSVLRYRR*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0018	cloud	direct	high	710	0.999	GCA_000019425.1_01388
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1360411	1360632	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	10597	10818	GCA_000019425_1_1_1283	GCA_000019425_1_1_1283	+	4686137	.	PFAM:PF10078.8	transcriptional-repressor	MINKKSNASTPLEKAINAVGGSQKVLAEKVGVTPQAINMLKKRGGSLPVTKMRKYEEVTGLPREVLYPGIFAA*	phrogs_hmm	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0019	cloud	direct	high	221	0.995	GCA_000019425.1_01389
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1360663	1361205	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	10849	11391	GCA_000019425_1_1_1284	GCA_000019425_1_1_1284	+	4686137	.	pfam06254	Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	MHSLAYQHNTGIHPGAMINRAQPKAEPGHDKIRDAVRAWSSSLDNQDVVSALIINEYREQGGTAISFPEDISRARQKLFRFLDNRFDSDQYRENVRELTPAIMAVLPVEFRTRLAPQNDTMSLIASAMKECSEAKQAVLLNAPEHQKMKEVSEGIASLFRLMPEQVGPLMTMVTSMLGVI*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0020	cloud	direct	high	542	0.998	GCA_000019425.1_01390
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1361291	1362199	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	11477	12385	GCA_000019425_1_1_1285	GCA_000019425_1_1_1285	+	4686137	.	PFAM:PF04492.12	Replication-protein-O	MSNTAEIINFPNKTEQPGGRMADLSNGYTKVANEIQQLKPRLRLSGREWQCFEAVIWLTYGWNKKQDRVTNTVIAELTGLSDTHVSDALKSLAERKIIFSQKQGMMKIVGVNTDLSAWILDKPETGRKFPKTGKSFPKSGITFPKTVDTQYKNKNSIKRSSSENSDESSDARLKKFLSTHPEAAVYTPSGAKWGSAEDLETAKWISSRVKLINPTCKAPDMTSWSNTVRLMRQIDNRSHQDICALYDWASKHHFWQTNILSPESLRKQWDKLTMQRNAGGEQRAVKPDLDFNNTDWAYGVIR*	rep_hall_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0021	cloud	direct	high	908	0.999	GCA_000019425.1_01391
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1362196	1362885	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	12382	13071	GCA_000019425_1_1_1286	GCA_000019425_1_1_1286	+	4686137	.	PFAM:PF06992.10	Replication-protein-P	MKSLAEQMRNHDREQMSRMAHNLPEQYQECAPVEQVAQVFNKLFNELRAAFPASMANFRTQEDLNEFRRQWLLAFQENGIHTMAQVDAGMRIARRQERPFLPSPGQFVAWCKQSGGALGVNVDQVIAEYWEWRNRSFEFISSEQFPWSQPVMYHICVELRHRSTERQLTHGELAREAGDLLDMWERRVTEGKPVPPVRRAIAAPAAEQGPTPIQLLLAKYNRNKSNGMV*	rep_hall_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0022	cloud	direct	high	689	0.999	GCA_000019425.1_01392
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1362949	1363668	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	13135	13854	GCA_000019425_1_1_1287	GCA_000019425_1_1_1287	+	4686137	.	.	hypothetical protein	MSTITKEWLLKTIAELEEERDATPGAVNEDAAMALAAMKLALASLEAEPVAWLLSGGGAKNNVSFDSGNAYAAQLREVTPLYTAPPAPVSVPAAMEIDDDFDSAFEHGKAVGWNAYRAAMLQAEPVSNSDELPLDYLQGHKDGLEWAAQLAEANHPQTGDWLYDDQIELARAIRKGPDMPTVQGGNSPVIPDGWVMVPVELTPDMRAAWDSAPYTDDDDNDMQAAYRAMIAVAPQWKVK*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0023	cloud	direct	high	719	0.999	GCA_000019425.1_01393
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1363889	1364344	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	14075	14530	GCA_000019425_1_1_1288	GCA_000019425_1_1_1288	+	4686137	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MIIPKDGIKLHRGNLGAITQHLKPLLENGECFRLQLKDWREKRSLSQNSLSHVWYKEISDYLIKSGRTDATPAWVKRNLKKTYLGYEEVEYTDFVTGIKTIELELRHTSDLDTGDMHHFMCQVEGWCAQFGLVLTIPQSSEFQVLRDKQEA*	phrogs_hmm	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0024	cloud	direct	high	455	0.998	GCA_000019425.1_01394
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1364344	1364514	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	14530	14700	GCA_000019425_1_1_1289	GCA_000019425_1_1_1289	+	4686137	.	PRK09689	prophage protein NinE; Provisional	MSTPLSRVITNEIFRVPARRKPKPAVKPSDIPTLKDYTARLVDQKWLRLAARRKSA*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0025	cloud	direct	high	170	0.994	GCA_000019425.1_01395
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1364511	1365179	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	14697	15365	GCA_000019425_1_1_1290	GCA_000019425_1_1_1290	+	4686137	.	cd07424	PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm.  The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine.  This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-).  The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes.  Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes.  PPPs belong to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets.  This domain is thought to allow for productive metal coordination.	MSMYQRINGADWRNIFVVGDLHGCYTLLMNELEKVSFDPACDLLISVGDLVDRGAENVECLELITMPWFRAVRGNHEQMMIDGLSEYGNVNHWLENGGVWFFSLDYEKEVLAKALVHKSASLPFVIELVTAERKIVICHADYPHNEYAFDKPVPKDMVIWNRERVSDAQDGIVSPIAGADLFIFGHTPARQPLKYANQMYIDTGAVFCGNLTLVQVQGGAHA*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0026	cloud	direct	high	668	0.999	GCA_000019425.1_01396
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1365172	1365813	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	15358	15999	GCA_000019425_1_1_1291	GCA_000019425_1_1_1291	+	4686137	.	PFAM:PF05766.11	NinG-recombination-protein	MRKPSRRKCKVCGEYFVPKFHDIRIRWCSPEHGAILAMEERKKEKVKAAAKRIKEQKEAEKDGRKRRKERLAELRPDGYYKAQAQKAFNAFIRARDADLPCISCGETNPPDLHGGQWDCGHFKTVGAYPELRFEERNAHKQCKSCNAGAGKYTAKEATVAQQYEAGLVARYGQGYVNWLNGPHEMTNYRREDFIRIRDEYRDKLKALKQREAA*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0027	cloud	direct	high	641	0.998	GCA_000019425.1_01397
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1365810	1366016	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	15996	16202	GCA_000019425_1_1_1292	GCA_000019425_1_1_1292	+	4686137	.	pfam14354	Restriction alleviation protein Lar. This family includes the restriction alleviation protein Lar encoded by the Rac prophage of Escherichia coli. This protein modulates the activity of the Escherichia coli restriction and modification system.	MKPMIFDLKLPHWAFLLECPFCGGGAELFSDGDGVYAGCSTKQCLIKPITDTYPTKRDAIRAWNRRPS*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0028	cloud	direct	high	206	0.995	GCA_000019425.1_01398
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1366129	1366938	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	16315	17124	GCA_000019425_1_1_1293	GCA_000019425_1_1_1293	+	4686137	.	pfam03589	Antitermination protein. 	MNLESIAKYFAPKSPMFSDSPRATASDSLTGTDVMAALGLAGHKCGFGFDLYLSKIGISSPDIALERLYEQARKLSGKFRALSELDESARSGVLKVLCAFAYQDYSRSAASTRKCDCCDGGGFTEAQVFTNKVSYPWGKPPYWSKMSRAVRPSDWESWTQAREVVRVKCKPCNGKGVISNSCRCHGKGKVLDKAESDRQGVPVMKACDRCGGRGYARLKFSTVIEGVNTVAEIKKTAAYEQLQPLFEELVAECHKQESMADSILSKVTR*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0029	cloud	direct	high	809	0.999	GCA_000019425.1_01399
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1367417	1367641	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	17603	17827	GCA_000019425_1_1_1294	GCA_000019425_1_1_1294	+	4686137	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYRMDKLTTGAAYGASAGSILNGMLNAYSPEQWNAIGVLVGIIIAVMTYLTNLYFKIREDNRRSRSRDEPNVEE*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0030	cloud	direct	high	224	0.996	GCA_000019425.1_01400
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1367619	1368113	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	17805	18299	GCA_000019425_1_1_1295	GCA_000019425_1_1_1295	+	4686137	.	CDD:cd16900	endolysin-R21-like-protein	MNPTLRNKLVGAIVGGSGAITIAAVMLGNADGLEGRRYYAYQDVVGVWTVCDGHTGTDIRRGHRYTDKECDNLLKADLRKVASAIDPLIKVRIPEPTRAALYSFTYNVGSGAFASSTLLKKLNSGDVPGACKELQRWTYAGGKQWKGLITRREIEREVCEWGQK*	common_virus_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0031	cloud	direct	high	494	0.998	GCA_000019425.1_01401
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1368110	1368568	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	18296	18754	GCA_000019425_1_1_1296	GCA_000019425_1_1_1296	+	4686137	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MSRLTAIICAVVICLLVSMAWAINHYRDNAITYKDQRDKATKSLRLANDTIKDMQTRQRDVAALDAKYTGELADAKETIERLHSDVIAGRKRLQVAATCAKSTTGASSMGDGESPRLTADAELNYYRLRSGIDRITAQVNYLQEYIRTQCLK*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0032	cloud	direct	high	458	0.998	GCA_000019425.1_01402
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1368767	1369285	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	18953	19471	GCA_000019425_1_1_1297	GCA_000019425_1_1_1297	+	4686137	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MNNPSVIPAFDFREMVTTLDNKIITTSLKVADYFGKRHKDVLRAIRNLKCSDDFTQRNFAPIDFIDKNGDVQPMYNITRDGCMMLVMGFTGKTAAAVKECYINAFNWMAEQLNRRMAMGEELQHRYAIKETRSKLKGTIGSRLMNERKKEKRVLELEHEHIMQVTQPELLIG*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0033	cloud	direct	high	518	0.998	GCA_000019425.1_01403
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1369357	1369971	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	19543	20157	GCA_000019425_1_1_1298	GCA_000019425_1_1_1298	-	4686137	.	PF05068.12	Mannitol repressor	MNTRIFMDYYHEIDFPSLFARAVESDDDVGTTLRIHLLCERMVEAWICACCDCQDLFGRDKNKLLIECNTKISMAGNLGIPPELMKSLKTINSMRNDLAHNPSIQSIADSRIQSLKDTLTEYFKQHPTEPSMEESKLGIFNAENQLTEEVSLDSDSSKNRLKLILLFSKLMQALMQLVAANHNGRWDNQFSQFVYHVTMNATKR*	hhsuite_tools	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0034	cloud	direct	high	614	0.998	GCA_000019425.1_01404
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1369991	1370182	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	20177	20368	GCA_000019425_1_1_1299	GCA_000019425_1_1_1299	+	4686137	.	.	hypothetical protein	MQIETKEMVIFLRDDGISLQYPDGQCAGYGIDGNMLIFMGQSCELFPTKIILHDQRTTNFTHK*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0035	cloud	direct	high	191	0.995	GCA_000019425.1_01405
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1370344	1371072	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	20530	21258	GCA_000019425_1_1_1300	GCA_000019425_1_1_1300	+	4686137	.	.	hypothetical protein	MGHKIITLSGAATDVLYALFFRGALLSGDLPSKSGTAELRELGFAETRHTATEYQKENHFTFLTSEGQKFAVEHLVNTRFGEQQYCASMTLGVEIDTSAAQKAIDELDQRIRDTVSFELIRNGVSFIKDAAIANGAIHAAAIETPQPVTNIYNISLGIQRDEPAQNKVTVSADKFKVKPGVDTNIETLIENALKNAAECAALDVTKQMAADKKAMDELASYVRTAIMMECFPGGVIWQQCRR*	.	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0036	cloud	direct	high	728	0.999	GCA_000019425.1_01406
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1371320	1371865	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	21506	22051	GCA_000019425_1_1_1301	GCA_000019425_1_1_1301	+	4686137	.	CDD:pfam07471	DNA-packaging-protein	MEVNKKRLSEIFGVSVRTIQNWQDQGMPVARGGGKGNEVLYESSAAIEWYSARDAAIENEKLRKEVEDLRLASESDLQPGTIDYERHRLTRAQADAQELKNAKDSAEVVETAFCTFVLSRMAGEVASILDGVPLSVQRRFPELENRHIDFLKKDIIKAMNKAAALDEIIPGLLSEYIEQSG*	hallmark_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0037	shell	direct	high	545	0.998	GCA_000019425.1_01407
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1371840	1373762	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	22026	23948	GCA_000019425_1_1_1302	GCA_000019425_1_1_1302	+	4686137	.	PFAM:PF05876.11	Large-Terminase	MNISNSQVKGLQHSARAGLLSLYRPEPQTAVEWADDNYYLPKESAYQEGRWETLPFQRAIMNAMGNDYIREVNVVKSARVGYSKMLLGVYAYFIQHKQRNSLIWLPTDGDAENFMKSHVEPTIRDIPSLLALAPWYGKKHRDNTLSMKRFSNGRGFWCLGGKAAKNYREKSVDVAGYDELAAFDEDIEKEGSPTFLGDKRIEGSVWPKSIRGSTPKTKGTCQIERAASESGHFMRFHVACPHCGEEQYLKFGDKETPFGLKWTPGEPSSVFYLCEHNACVIKQQELDFTEARYICDTTGIWTRDGLSWFSSTGTEIDPPDSVTFHIWTAYSPFTTWVQIVKDWLKTKGDTGKRKTFVNTTLGETWEPKIGERPDAELMAERKEFFGASVPERVAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEATLVRVDEAINKTYLRKNGVEMSVSRICWDIGGIDPTIVYNRSKKHGLFRVIPIKGASVYGKPVANMPRKRNKNGVYLTEVGTDTAKEQIYNRFTLVAQRDEPLAGAVHFPNNPEIYDLTEAQQLTAEEQVEKWVDGKKKIVWDSKKRRNEALDCFVYALAALRISISRWQLNLDSLLASLLEEEGTRNNNKTLADYARALSGEE*	hallmark_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0038	shell	direct	high	1922	0.999	GCA_000019425.1_01408
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1373762	1373968	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	23948	24154	GCA_000019425_1_1_1303	GCA_000019425_1_1_1303	+	4686137	.	PDB:2L6Q_A	Head-Tail-Connector-Protein	MATQTELDAARAALHDLMMGKRVATVQKDGRRVEFTATSVTDLKKYIADLESQVGTTSRRQGPARFYV*	hallmark_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0039	shell	direct	high	206	0.995	GCA_000019425.1_01409
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1373965	1375557	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	24151	25743	GCA_000019425_1_1_1304	GCA_000019425_1_1_1304	+	4686137	.	PFAM:PF05136.12	Portal-protein	MKIPSLVGPDGKTSLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNFSRGNARADDLVRNNGYAANAVQLHQDHIVGSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCTQATWDSDSTRLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPMEDGQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMASYYSAAPVRLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRKFVASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFEAGVKKSNEEEQDGARAA*	hallmark_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0040	shell	direct	high	1592	0.999	GCA_000019425.1_01410
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1375538	1376881	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	25724	27067	GCA_000019425_1_1_1305	GCA_000019425_1_1_1305	+	4686137	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MAHELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGITRLTDTVSGITLDAGQIAEPLALFGEDDDMDPRPSRSYQVANGIAVLPVSGTLVSKTRALQPYSGMTGYNGIIARLQQAISDPGVDGILLDMDTPGGMVSGAFDCADIIARMRDIKPIWALANDMNCSAGQLIASSASRRLVTQTARTGSIGVMMAHSNYGAALKTNGVEVTLIYSGDRKVDGNPYEKLPKDVRADFQTRIDATRQMFAEKVSAYTGMSVQDVLDTEAAVFSGQESLDNGLADELVNNTDALGVMREALDRRKKTTLGGTMPSPSASAVTTKPVDQAATQTTASAEQATTVDTTIASVAAPVDVSAQVTAAVAAENSRIMGILNCDEAKGRESQARALAETPGMTVESAQRILAAAPQSAQMRTDTALDRLMETAPGALQAGSASSDAADDLLNTPV*	mmseqs_cdd	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0041	cloud	direct	high	1343	0.999	GCA_000019425.1_01411
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1376891	1377223	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	27077	27409	GCA_000019425_1_1_1306	GCA_000019425_1_1_1306	+	4686137	.	PFAM:PF02924.13	head-decoration	MAITEVFTHNQPLGNSDPAHTAYGPGELTASTPAMTPLMLDATSGKLTVWDGAHAGAAMGILAVTADQNSAELAYYKSGSFRIEDVLWPSAVTDDNIKRNAFAGTAISIV*	phrogs_hmm	hypothetical_protein	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0042	cloud	direct	high	332	0.997	GCA_000019425.1_01412
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1377291	1378718	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	27477	28904	GCA_000019425_1_1_1307	GCA_000019425_1_1_1307	+	4686137	.	PDB:3BQW_A	Capsid-protein	MSVYTTAQLLAVNEKKFKFDPLFLRIFFRETYPFSTEKVYLSQIPGLVNMALYVSPIVSGKVIRSRGGSTSEFTPGYVKPKHEVNPLMTLRRLPDEDPQNLADPVYRRRRIILQNMKDEELAIAQVEEKQAVSAVLSGKYTMTGEAFEPVEVDMGRSAGNNIVQAGAAAWSTRDKETYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVEKKLDTRRGSNSELETAVKDLGMAVSYKGMFGDVAIVVYSGQYVENDVKKNYLPDLTMVLGNTQARGLRTYGCILDADAQREGINASTRYPKNWVQSGDPARESTMIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF*	hallmark_hmm	common_virus	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0043	cloud	direct	high	1427	0.999	GCA_000019425.1_01413
GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote	cenote	CDS	1378724	1379905	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C73	28910	30091	GCA_000019425_1_1_1308	GCA_000019425_1_1_1308	+	4686137	.	PRK09705	putative cyanate transporter; Provisional	MRNHQKTFTMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPVRFPQLWVKEA*	mmseqs_cdd	nonviral_gene	C73	30091	1349815	1379906	GCA_000019425.1|CP000948.1@region_1349816_1379906@tool_cenote_CDS_0044	persistent	direct	high	1181	0.999	GCA_000019425.1_01414
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1495469	1496452	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	1	984	GCA_000019425_1_1_1416	GCA_000019425_1_1_1416	+	4686137	.	PRK09546	zinc transporter ZntB. 	MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLHLNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPDQLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0001	persistent	direct	high	983	0.999	GCA_000019425.1_01525
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1496727	1496900	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	1259	1432	GCA_000019425_1_1_1417	GCA_000019425_1_1_1417	+	4686137	.	.	hypothetical protein	MTTLIYLQIPVPEPIPGDPVPVPDPIPRPQPMPDPPPDEEPIKLSHRERRSARIRAC*	.	hypothetical_protein	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0002	persistent	direct	high	173	0.994	GCA_000019425.1_01527
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1496930	1498303	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	1462	2835	GCA_000019425_1_1_1418	GCA_000019425_1_1_1418	+	4686137	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0003	persistent	direct	high	1373	0.999	GCA_000019425.1_01528
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1498432	1499367	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	2964	3899	GCA_000019425_1_1_1419	GCA_000019425_1_1_1419	-	4686137	.	PRK10696	tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPACWQPEEDENQLDELRLNVVEVK*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0004	persistent	direct	high	935	0.999	GCA_000019425.1_01529
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1499419	1500654	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	3951	5186	GCA_000019425_1_1_1420	GCA_000019425_1_1_1420	-	4686137	.	PDB:1Z19_B	Integrase	MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0005	cloud	direct	high	1235	0.999	GCA_000019425.1_01530
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1500656	1500871	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	5188	5403	GCA_000019425_1_1_1421	GCA_000019425_1_1_1421	-	4686137	.	pfam06806	Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0006	cloud	direct	high	215	0.995	GCA_000019425.1_01531
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1500950	1501159	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	5482	5691	GCA_000019425_1_1_1422	GCA_000019425_1_1_1422	-	4686137	.	pfam06688	Protein of unknown function (DUF1187). This family consists of several short, hypothetical bacterial proteins of around 62 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi. The function of this family is unknown.	MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0007	cloud	direct	high	209	0.995	GCA_000019425.1_01532
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1501403	1502212	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	5935	6744	GCA_000019425_1_1_1423	GCA_000019425_1_1_1423	-	4686137	.	PFAM:PF03837.13	RecT-protein	MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0008	cloud	direct	high	809	0.999	GCA_000019425.1_01534
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1502205	1504805	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	6737	9337	GCA_000019425_1_1_1424	GCA_000019425_1_1_1424	-	4686137	.	PDB:3H4R_A	Exonuclease	MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQGNTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSKNPVDDDKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYAND*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0009	cloud	direct	high	2600	1.0	GCA_000019425.1_01535
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1504907	1505182	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	9439	9714	GCA_000019425_1_1_1425	GCA_000019425_1_1_1425	-	4686137	.	PRK09790	hypothetical protein; Reviewed	MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0010	cloud	direct	high	275	0.996	GCA_000019425.1_01536
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1505257	1505427	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	9789	9959	GCA_000019425_1_1_1426	GCA_000019425_1_1_1426	-	4686137	.	NF041288	hypothetical protein	MTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0011	cloud	direct	high	170	0.994	GCA_000019425.1_01537
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1505427	1505648	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	9959	10180	GCA_000019425_1_1_1427	GCA_000019425_1_1_1427	-	4686137	.	PRK11354	FtsZ inhibitor protein; Reviewed	MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVFLGRDGLPVKAESW*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0012	cloud	direct	high	221	0.995	GCA_000019425.1_01538
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1505967	1506578	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	10499	11110	GCA_000019425_1_1_1428	GCA_000019425_1_1_1428	+	4686137	.	pfam14163	Super-infection exclusion protein B. This family includes superinfection exclusion proteins. These proteins prevent the growth of superinfecting phage which are insensitive to repression. It aborts lytic development of superinfecting phage.	MRLRVVPGFISPPPGFGGLGYTPTARACVNISIPLQLRVIDMLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0013	cloud	direct	high	611	0.998	GCA_000019425.1_01539
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1506575	1506730	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	11107	11262	GCA_000019425_1_1_1429	GCA_000019425_1_1_1429	-	4686137	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0014	shell	direct	high	155	0.994	GCA_000019425.1_01540
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1506741	1506875	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	11273	11407	GCA_000019425_1_1_1430	GCA_000019425_1_1_1430	-	4686137	.	PF03943.13	TAP C-terminal domain	MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM*	hhsuite_tools	hypothetical_protein	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0015	cloud	direct	high	134	0.993	GCA_000019425.1_01541
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1507184	1507660	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	11716	12192	GCA_000019425_1_1_1431	GCA_000019425_1_1_1431	-	4686137	.	.	hypothetical protein	MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASDEIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT*	.	hypothetical_protein	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0016	cloud	direct	high	476	0.998	GCA_000019425.1_01542
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1507784	1508080	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	12316	12612	GCA_000019425_1_1_1432	GCA_000019425_1_1_1432	+	4686137	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0017	cloud	direct	high	296	0.997	GCA_000019425.1_01543
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1508103	1508525	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	12635	13057	GCA_000019425_1_1_1433	GCA_000019425_1_1_1433	+	4686137	.	pfam06254	Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	MKIKHEHIESVLFALAAEKGQAWVANAITEEYLRQGGGELPLVPGKDWNNQQNIYHRWLKGETKTQREKIQKLIPAILAILPRELRHRLCIFDTLERRALLAAQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVIVH*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0018	cloud	direct	high	422	0.998	GCA_000019425.1_01544
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1508538	1509395	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	13070	13927	GCA_000019425_1_1_1434	GCA_000019425_1_1_1434	+	4686137	.	COG3756	Uncharacterized conserved protein YdaU, DUF1376 family [Function unknown]. 	MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0019	cloud	direct	high	857	0.999	GCA_000019425.1_01545
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1509402	1510148	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	13934	14680	GCA_000019425_1_1_1435	GCA_000019425_1_1_1435	+	4686137	.	PDB:4M4W_K	Replicative-helicase	MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVVQPGIAK*	rep_hall_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0020	cloud	direct	high	746	0.999	GCA_000019425.1_01546
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1510171	1510731	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	14703	15263	GCA_000019425_1_1_1436	GCA_000019425_1_1_1436	+	4686137	.	PFAM:PF04079.15	Ren-like-exclusion-protein	METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACHGVLIITVITPSPTKNSATKMPEN*	phrogs_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0021	cloud	direct	high	560	0.998	GCA_000019425.1_01547
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1510764	1511063	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	15296	15595	GCA_000019425_1_1_1437	GCA_000019425_1_1_1437	+	4686137	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLVMMQAQLEGAQQYITEQCLK*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0022	shell	direct	high	299	0.997	GCA_000019425.1_01548
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1511234	1512658	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	15766	17190	GCA_000019425_1_1_1438	GCA_000019425_1_1_1438	+	4686137	.	pfam02386	Cation transport protein. This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilising ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.	MCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFIDALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGGAKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGISTVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIELRFFLLIALGVIIVTSFQVWHIGMYDLHGSFIHSFFLASSMLTDNGLATQDYASWPTHTIVFLLLSSFFGGCIGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVTDRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFGVLNDIAKCLMCIAMILGRLEIYPVIILFSGFFWRS*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0023	cloud	direct	high	1424	0.999	GCA_000019425.1_01549
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1512796	1513059	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	17328	17591	GCA_000019425_1_1_1439	GCA_000019425_1_1_1439	+	4686137	.	CDD:cd16403	ParB-like-protein	MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0024	cloud	direct	high	263	0.996	GCA_000019425.1_01550
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1513040	1513399	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	17572	17931	GCA_000019425_1_1_1440	GCA_000019425_1_1_1440	+	4686137	.	PFAM:PF08809.10	Tail-assembly-chaperone	MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP*	phrogs_hmm	hypothetical_protein	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0025	cloud	direct	high	359	0.997	GCA_000019425.1_01551
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1513873	1514901	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	18405	19433	GCA_000019425_1_1_1441	GCA_000019425_1_1_1441	+	4686137	.	pfam06791	Prophage tail length tape measure protein. This family represents a conserved region located towards the N-terminal end of prophage tail length tape measure protein (TMP). TMP is important for assembly of phage tails and involved in tail length determination. Mutated forms TMP cause tail fibers to be shortened.	MAEQTSRLAIIIDSTGAKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAIDTVGRRYSELKKFFDKGLIDKEEYEFLVRKLNETTEELSGVAQAQREAEKAGKLAAAQQEAQAQAFQRMLDKIDPLAAALRNLEQQHDELNAAFASGKINGSQFENYSRKIQETRRELTGEAQAEREAAKAHDEQVVALQRLIAQLDPVGTAFNRLVEQQKQLNEAKAKGMLSPEMYEELSGKLRAMRSELEVTQSQLSKTGMSAKQTAFAMRMLPAQMTDIVVGLSTGQSPFMVLMQQGGHSAMQETRIASLPVTAIPAGMKIPCVTAGSA*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0026	cloud	direct	high	1028	0.999	GCA_000019425.1_01552
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1514901	1515032	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	19433	19564	GCA_000019425_1_1_1442	GCA_000019425_1_1_1442	+	4686137	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGRCE*	mmseqs_cdd	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0027	cloud	ambiguous	low	2	0.015	GCA_000019425.1_01552
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1515165	1516145	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	19697	20677	GCA_000019425_1_1_1443	GCA_000019425_1_1_1443	-	4686137	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEKQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQNPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0028	cloud	direct	high	980	0.999	GCA_000019425.1_01553
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1516468	1519830	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	21000	24362	GCA_000019425_1_1_1444	GCA_000019425_1_1_1444	+	4686137	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNTASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA*	hallmark_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0029	shell	direct	moderate	1997	0.594	GCA_000019425.1_01555
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1519830	1520405	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	24362	24937	GCA_000019425_1_1_1445	GCA_000019425_1_1_1445	+	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP*	hallmark_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0030	persistent	direct	high	575	0.998	GCA_000019425.1_01556
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1520503	1521093	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	25035	25625	GCA_000019425_1_1_1446	GCA_000019425_1_1_1446	-	4686137	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0031	shell	direct	high	590	0.998	GCA_000019425.1_01558
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1521410	1521643	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	25942	26175	GCA_000019425_1_1_1447	GCA_000019425_1_1_1447	-	4686137	.	2OXL_A	Hypothetical protein ymgB	MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM*	hhsuite_tools	hypothetical_protein	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0032	shell	direct	high	233	0.996	GCA_000019425.1_01559
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1521834	1522814	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	26366	27346	GCA_000019425_1_1_1448	GCA_000019425_1_1_1448	+	4686137	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH*	common_virus_hmm	common_virus	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0033	cloud	direct	high	980	0.999	GCA_000019425.1_01560
GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote	cenote	CDS	1523803	1524237	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C79	28335	28769	GCA_000019425_1_1_1449	GCA_000019425_1_1_1449	-	4686137	.	PRK15005	universal stress protein UspF. 	MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR*	mmseqs_cdd	nonviral_gene	C79	28769	1495469	1524238	GCA_000019425.1|CP000948.1@region_1495470_1524238@tool_cenote_CDS_0034	persistent	direct	high	434	0.998	GCA_000019425.1_01561
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1720720	1720953	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	1	234	GCA_000019425_1_1_1618	GCA_000019425_1_1_1618	+	4686137	.	2OXL_A	Hypothetical protein ymgB	MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM*	hhsuite_tools	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0001	shell	direct	high	233	0.996	GCA_000019425.1_01735
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1721270	1721860	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	551	1141	GCA_000019425_1_1_1619	GCA_000019425_1_1_1619	+	4686137	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0002	shell	direct	high	590	0.998	GCA_000019425.1_01736
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1721958	1722533	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	1239	1814	GCA_000019425_1_1_1620	GCA_000019425_1_1_1620	-	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP*	hallmark_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0003	persistent	direct	high	575	0.998	GCA_000019425.1_01737
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1722533	1723495	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	1814	2776	GCA_000019425_1_1_1621	GCA_000019425_1_1_1621	-	4686137	.	PDB:1OCY_A	Tail-fiber	MNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA*	hallmark_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0004	cloud	direct	high	962	0.999	GCA_000019425.1_01739
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1723446	1724015	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	2727	3296	GCA_000019425_1_1_1622	GCA_000019425_1_1_1622	-	4686137	.	CDD:pfam07471	DNA-packaging-protein	MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRADRQYAGGSRS*	hallmark_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0005	shell	direct	high	569	0.998	GCA_000019425.1_01740
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1724695	1725105	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	3976	4386	GCA_000019425_1_1_1623	GCA_000019425_1_1_1623	+	4686137	.	pfam07166	Protein of unknown function (DUF1398). This family consists of several hypothetical Enterobacterial proteins of around 130 residues in length. Members of this family seem to be found exclusively in Escherichia coli and Salmonella species. The function of this family is unknown.	MDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0006	shell	direct	high	410	0.998	GCA_000019425.1_01741
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1725257	1725430	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	4538	4711	GCA_000019425_1_1_1624	GCA_000019425_1_1_1624	-	4686137	.	pfam08178	GnsA/GnsB toxin of bacterial toxin-antitoxin system. This family consists of the GnsA/GnsB family. GnsA and GnsB are multicopy suppressors of the secG null mutation. These proteins participate in the synthesis of phospholipids, suggesting the functional relationship between SecG and membrane phospholipids. Over-expression of gnsA and gnsB causes a remarkable increase in the unsaturated fatty acid content. However, the gnsA-gnsB double null mutant exhibits no effect. Both proteins are predicted to possess a helix-turn-helix structure. GnsAB is a family of putative bacterial toxins (both GnsA and GnsB) that, are neutralized by the antitoxin YmcE, pfam15939.	MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0007	shell	direct	high	173	0.994	GCA_000019425.1_01742
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1726103	1726315	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	5384	5596	GCA_000019425_1_1_1625	GCA_000019425_1_1_1625	-	4686137	.	PRK09890	cold shock protein CspG; Provisional	MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0008	shell	direct	high	212	0.995	GCA_000019425.1_01744
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1726678	1727175	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	5959	6456	GCA_000019425_1_1_1626	GCA_000019425_1_1_1626	-	4686137	.	pfam10721	Protein of unknown function (DUF2514). This family is conserved in bacteria and some viruses. The function is not known.	MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM*	mmseqs_cdd	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0009	shell	direct	high	497	0.998	GCA_000019425.1_01745
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1727172	1727705	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	6453	6986	GCA_000019425_1_1_1627	GCA_000019425_1_1_1627	-	4686137	.	CDD:COG3772	lysozyme	MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0010	shell	direct	high	533	0.998	GCA_000019425.1_01746
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1727702	1728013	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	6983	7294	GCA_000019425_1_1_1628	GCA_000019425_1_1_1628	-	4686137	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL*	mmseqs_cdd	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_000019425.1_01747
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1728018	1728224	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	7299	7505	GCA_000019425_1_1_1629	GCA_000019425_1_1_1629	-	4686137	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE*	mmseqs_cdd	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0012	persistent	direct	high	206	0.995	GCA_000019425.1_01748
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1728266	1728385	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	7547	7666	GCA_000019425_1_1_1630	GCA_000019425_1_1_1630	+	4686137	.	.	hypothetical protein	MFEKIGVYGVVLTAHVVLNGAKKTYTLKMWVIILKESHI*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0013	cloud	direct	high	119	0.992	GCA_000019425.1_01749
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1728987	1729202	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	8268	8483	GCA_000019425_1_1_1631	GCA_000019425_1_1_1631	-	4686137	.	PRK10354	RNA chaperone/antiterminator CspA. 	MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIITD*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0014	persistent	direct	high	215	0.995	GCA_000019425.1_01751
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1729503	1729715	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	8784	8996	GCA_000019425_1_1_1632	GCA_000019425_1_1_1632	+	4686137	.	PRK15463	cold shock-like protein CspF; Provisional	MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0015	shell	direct	high	212	0.995	GCA_000019425.1_01752
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1730137	1730889	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	9418	10170	GCA_000019425_1_1_1633	GCA_000019425_1_1_1633	-	4686137	.	pfam03589	Antitermination protein. 	MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR*	mmseqs_cdd	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0016	shell	direct	high	752	0.999	GCA_000019425.1_01753
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1730903	1731952	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	10184	11233	GCA_000019425_1_1_1634	GCA_000019425_1_1_1634	-	4686137	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGEQTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0017	shell	direct	high	1049	0.999	GCA_000019425.1_01754
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1732299	1732550	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	11580	11831	GCA_000019425_1_1_1635	GCA_000019425_1_1_1635	-	4686137	.	.	hypothetical protein	MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALINFVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0018	shell	direct	high	251	0.996	GCA_000019425.1_01755
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1732767	1732922	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	12048	12203	GCA_000019425_1_1_1636	GCA_000019425_1_1_1636	-	4686137	.	pfam01848	Hok/gef family. 	MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0019	persistent	direct	high	155	0.994	GCA_000019425.1_01756
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1732994	1733281	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	12275	12562	GCA_000019425_1_1_1637	GCA_000019425_1_1_1637	-	4686137	.	COG2026	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense mechanisms]. 	MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0020	cloud	direct	high	287	0.997	GCA_000019425.1_01757
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1733281	1733520	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	12562	12801	GCA_000019425_1_1_1638	GCA_000019425_1_1_1638	-	4686137	.	PRK11235	type II toxin-antitoxin system RelB/DinJ family antitoxin. 	MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0021	cloud	direct	high	239	0.996	GCA_000019425.1_01758
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1734053	1734385	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	13334	13666	GCA_000019425_1_1_1639	GCA_000019425_1_1_1639	+	4686137	.	PF14282.6	FlxA-like protein	MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALVQKQIESLWAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNTAGTIDIYV*	hhsuite_tools	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0022	cloud	direct	high	332	0.997	GCA_000019425.1_01759
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1734770	1734997	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	14051	14278	GCA_000019425_1_1_1640	GCA_000019425_1_1_1640	-	4686137	.	.	hypothetical protein	MMKRVSMNEWIMPVLIYAQNTMLNLKLTIPGLRAERKVISKLSPRSYLKRSLIPIKKIETKIDSVECISIHRVDS*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0023	cloud	direct	high	227	0.996	GCA_000019425.1_01760
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1734994	1735284	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	14275	14565	GCA_000019425_1_1_1641	GCA_000019425_1_1_1641	-	4686137	.	PFAM:PF06254.10	CII-like-transcriptional-activator	MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEATTG*	phrogs_hmm	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0024	cloud	direct	high	290	0.997	GCA_000019425.1_01761
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1735268	1735498	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	14549	14779	GCA_000019425_1_1_1642	GCA_000019425_1_1_1642	-	4686137	.	PRK09744	DNA-binding transcriptional regulator DicC; Provisional	MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKRAGRLNNENHS*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0025	cloud	direct	high	230	0.996	GCA_000019425.1_01762
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1735582	1735989	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	14863	15270	GCA_000019425_1_1_1643	GCA_000019425_1_1_1643	+	4686137	.	PDB:2FJR_A	Repressor-protein-CI	METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRTNKR*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0026	cloud	direct	high	407	0.998	GCA_000019425.1_01763
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1736156	1736311	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	15437	15592	GCA_000019425_1_1_1644	GCA_000019425_1_1_1644	+	4686137	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE*	mmseqs_cdd	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0027	shell	direct	high	155	0.994	GCA_000019425.1_01764
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1736313	1736441	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	15594	15722	GCA_000019425_1_1_1645	GCA_000019425_1_1_1645	+	4686137	.	.	hypothetical protein	MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0028	shell	direct	high	128	0.992	GCA_000019425.1_01765
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1736471	1736689	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	15752	15970	GCA_000019425_1_1_1646	GCA_000019425_1_1_1646	+	4686137	.	.	hypothetical protein	MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0029	shell	direct	high	218	0.995	GCA_000019425.1_01766
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1736693	1736857	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	15974	16138	GCA_000019425_1_1_1647	GCA_000019425_1_1_1647	-	4686137	.	.	hypothetical protein	MNQLPRHALSRYGLTFQGNILSVNCQFRMRTRVRRTHSTSPVENSLITNLSFVD*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0030	shell	direct	high	164	0.994	GCA_000019425.1_01767
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1737257	1737445	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	16538	16726	GCA_000019425_1_1_1648	GCA_000019425_1_1_1648	+	4686137	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0031	shell	direct	high	188	0.995	GCA_000019425.1_01769
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1737442	1737633	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	16723	16914	GCA_000019425_1_1_1649	GCA_000019425_1_1_1649	+	4686137	.	pfam07358	Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0032	shell	direct	high	191	0.995	GCA_000019425.1_01770
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1737726	1738646	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	17007	17927	GCA_000019425_1_1_1650	GCA_000019425_1_1_1650	+	4686137	.	PFAM:PF06630.10	exonuclease	MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELAYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWP*	phrogs_hmm	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0033	shell	direct	high	920	0.999	GCA_000019425.1_01771
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1738643	1739185	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	17924	18466	GCA_000019425_1_1_1651	GCA_000019425_1_1_1651	+	4686137	.	PDB:4U7B_B	Mos-transposase	MKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0034	shell	direct	high	542	0.998	GCA_000019425.1_01772
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1739160	1739681	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	18441	18962	GCA_000019425_1_1_1652	GCA_000019425_1_1_1652	+	4686137	.	PDB:1Z19_B	Integrase	MITDVWKYRGKSTGELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPGFAPIFPDICYHLTHYKPAAADIPVASDNPAHYADAIRYNARTPLQGSLLPLTRLVWA*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0035	cloud	direct	high	521	0.998	GCA_000019425.1_01773
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1739515	1740420	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	18796	19701	GCA_000019425_1_1_1653	GCA_000019425_1_1_1653	-	4686137	.	PDB:4U7B_B	Mos-transposase	MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0036	shell	direct	high	905	0.999	GCA_000019425.1_01774
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1740378	1740743	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	19659	20024	GCA_000019425_1_1_1654	GCA_000019425_1_1_1654	-	4686137	.	PRK09413	IS2 repressor TnpA; Reviewed	MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0037	shell	direct	high	365	0.997	GCA_000019425.1_01775
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1740754	1741692	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	20035	20973	GCA_000019425_1_1_1655	GCA_000019425_1_1_1655	+	4686137	.	PDB:1Z19_B	Integrase	MTSLKTSIKTITYLSDIGCLEIQGASLIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHLREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN*	common_virus_hmm	common_virus	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0038	shell	direct	high	938	0.999	GCA_000019425.1_01776
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1741712	1741822	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	20993	21103	GCA_000019425_1_1_1656	GCA_000019425_1_1_1656	-	4686137	.	.	hypothetical protein	MTIEKHERSTKDLVKAAVSGWLGTALEFMDFKSHAC*	.	hypothetical_protein	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0039	.	unmatched_CDS	none	0	0	.
GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote	cenote	CDS	1741880	1742899	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C91	21161	22180	GCA_000019425_1_1_1657	GCA_000019425_1_1_1657	-	4686137	.	PRK10083	putative oxidoreductase; Provisional	MKSILIEKPNQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFTEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPIVIDWLSKGLIKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE*	mmseqs_cdd	nonviral_gene	C91	22180	1720720	1742900	GCA_000019425.1|CP000948.1@region_1720721_1742900@tool_cenote_CDS_0040	persistent	direct	high	1019	0.999	GCA_000019425.1_01777
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2554038	2554793	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	1	756	GCA_000019425_1_1_2420	GCA_000019425_1_1_2420	-	4686137	.	PRK15091	phospholipid-binding lipoprotein MlaA. 	MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGFYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQAIQDDLKDIDSE*	mmseqs_cdd	nonviral_gene	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0001	persistent	direct	high	755	0.999	GCA_000019425.1_02591
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2555087	2556019	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	1050	1982	GCA_000019425_1_1_2421	GCA_000019425_1_1_2421	+	4686137	.	COG2116	Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]. 	MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA*	mmseqs_cdd	nonviral_gene	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0002	persistent	direct	high	932	0.999	GCA_000019425.1_02592
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2556331	2557488	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	2294	3451	GCA_000019425_1_1_2422	GCA_000019425_1_1_2422	+	4686137	.	PDB:1Z19_B	Integrase	MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE*	common_virus_hmm	common_virus	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0003	cloud	direct	high	1157	0.999	GCA_000019425.1_02594
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2558000	2558920	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	3963	4883	GCA_000019425_1_1_2423	GCA_000019425_1_1_2423	+	4686137	.	cd04187	Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of  bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the  bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYIIKRVKK*	mmseqs_cdd	nonviral_gene	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0004	cloud	direct	high	920	0.999	GCA_000019425.1_02595
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2558917	2560248	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	4880	6211	GCA_000019425_1_1_2424	GCA_000019425_1_1_2424	+	4686137	.	.	hypothetical protein	MNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIPAFTYDLPLLYKLKGHIDSIDSYEYISSYSYILYTYVLFISIFTEYLDARVLSLFLKVIYIYSLYAIFTSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQEQIVIIFLPFLVYSLTCKNNKSMLLLFFSLLIISTAKNQFILTPLIVYSYYIFFDRHKLIIKSVICVVCLLASIFAISYSKGVVELNKYHATYFGSYLYMKNNGYKMPSYVDDKCVGLDAWGNKFDISFGATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKLPFDDGVMSQYKENYFHVYKKLHVIYGESNILTTITNIKDNIFKNIRFISLLLFFIASIFIRNNKIKASLFVVSLFGISQFYVSFFGEGYRDLSKHLFGMYFSFDLCLYITVVFLIYKIIQRNQDNSDVKH*	.	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0005	cloud	direct	high	1331	0.999	GCA_000019425.1_02596
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2560589	2560891	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	6552	6854	GCA_000019425_1_1_2425	GCA_000019425_1_1_2425	+	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MRPATIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELPEE*	hallmark_hmm	common_virus	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0006	shell	direct	high	302	0.997	GCA_000019425.1_02597
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2560863	2561303	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	6826	7266	GCA_000019425_1_1_2426	GCA_000019425_1_1_2426	-	4686137	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR*	hallmark_hmm	common_virus	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0007	cloud	direct	high	440	0.998	GCA_000019425.1_02598
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2561330	2561932	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	7293	7895	GCA_000019425_1_1_2427	GCA_000019425_1_1_2427	-	4686137	.	PDB:4A0U_B	Tail-fiber	MLPLVIPRTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC*	hallmark_hmm	common_virus	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0008	cloud	direct	high	602	0.998	GCA_000019425.1_02599
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2561898	2562173	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	7861	8136	GCA_000019425_1_1_2428	GCA_000019425_1_1_2428	-	4686137	.	TIGR01712	phage N-6-adenine-methyltransferase. This model is a fragment-mode model for a phage-borne DNA N-6-adenine-methyltransferase. [Mobile and extrachromosomal element functions, Prophage functions, DNA metabolism, Restriction/modification]	MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYPW*	mmseqs_cdd	nonviral_gene	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0009	shell	direct	high	275	0.996	GCA_000019425.1_02600
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2562173	2562667	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	8136	8630	GCA_000019425_1_1_2429	GCA_000019425_1_1_2429	-	4686137	.	PFAM:PF14557.5	transcriptional-activator	MSMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA*	phrogs_hmm	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0010	shell	direct	high	494	0.998	GCA_000019425.1_02601
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2562664	2563032	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	8627	8995	GCA_000019425_1_1_2430	GCA_000019425_1_1_2430	-	4686137	.	PFAM:PF04492.12	Replication-protein-O	MTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG*	rep_hall_hmm	common_virus	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0011	shell	direct	high	368	0.997	GCA_000019425.1_02602
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2563390	2563752	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	9353	9715	GCA_000019425_1_1_2431	GCA_000019425_1_1_2431	+	4686137	.	.	hypothetical protein	MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH*	.	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0012	shell	direct	high	362	0.997	GCA_000019425.1_02603
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2563818	2564642	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	9781	10605	GCA_000019425_1_1_2432	GCA_000019425_1_1_2432	+	4686137	.	COG5532	Uncharacterized conserved protein YfdQ, DUF2303 family [Function unknown]. 	MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA*	mmseqs_cdd	nonviral_gene	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0013	shell	direct	high	824	0.999	GCA_000019425.1_02604
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2564770	2565306	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	10733	11269	GCA_000019425_1_1_2433	GCA_000019425_1_1_2433	+	4686137	.	PFAM:PF12917.6	deoxyribonucleoside-5'-monophosphate-phosphatase	MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA*	phrogs_hmm	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0014	shell	direct	high	536	0.998	GCA_000019425.1_02605
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2565297	2565659	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	11260	11622	GCA_000019425_1_1_2434	GCA_000019425_1_1_2434	+	4686137	.	PF04448.12	Protein of unknown function (DUF551)	MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA*	hhsuite_tools	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0015	shell	direct	high	362	0.997	GCA_000019425.1_02606
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2565659	2565964	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	11622	11927	GCA_000019425_1_1_2435	GCA_000019425_1_1_2435	+	4686137	.	.	hypothetical protein	MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK*	.	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0016	cloud	direct	high	305	0.997	GCA_000019425.1_02607
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	CDS	2566096	2566296	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	12059	12259	GCA_000019425_1_1_2436	GCA_000019425_1_1_2436	+	4686137	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG*	phrogs_hmm	hypothetical_protein	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_CDS_0017	shell	direct	high	200	0.995	GCA_000019425.1_02608
GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote	cenote	tRNA	503277	503353	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C25	876	952	tRNA-Arg	tRNA-Arg	+	4686137	.	tRNAscan-SE score: 77.0	Arg	NA	tRNAscan-SE	.	C25	20583	502402	522985	GCA_000019425.1|CP000948.1@region_502403_522985@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote	cenote	tRNA	2556095	2556169	GCA_000019425.1	CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425.1_CP000948.1	GCA_000019425.1|CP000948.1	GCA_000019425_1_1	GCA_000019425_1_1@C123	2058	2132	tRNA-Arg	tRNA-Arg	+	4686137	.	tRNAscan-SE score: 57.7	Arg	NA	tRNAscan-SE	.	C123	12259	2554038	2566297	GCA_000019425.1|CP000948.1@region_2554039_2566297@tool_cenote_tRNA_0001	.	.	.	.	.	.