core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	37002	37208	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	1	207	GCA_000147095_1_1_40	GCA_000147095_1_1_40	-	2240045	.	PFAM:PF01610.16	Transposase	MEVAETSIVKKNHQIPCIINQKIDQKLIEKTSMTDIDHQLSISTSTVIRKINDFHFEHDFSRLPEIMS*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0001	shell	direct	high	206	0.995	GCA_000147095.1_00044
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	37525	37761	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	524	760	GCA_000147095_1_1_41	GCA_000147095_1_1_41	+	2240045	.	NF038388	sigma(X)-activator ComW. The pneumococcal DNA-binding protein ComW, critical for natural transformation, interacts with the sigma factor that is a master regulator for competence, sigma(X).	MLQKIYEQMTNFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0002	persistent	direct	high	236	0.996	GCA_000147095.1_00045
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	37950	39278	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	949	2277	GCA_000147095_1_1_42	GCA_000147095_1_1_42	+	2240045	.	PRK01117	adenylosuccinate synthetase; Provisional	MYVRKEEPEGSDKIMTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVIDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0003	persistent	direct	high	1328	0.999	GCA_000147095.1_00046
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	39520	40668	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	2519	3667	GCA_000147095_1_1_43	GCA_000147095_1_1_43	-	2240045	.	PDB:1XO0_A	Recombinase	MKYNKTKYPNIYYYETAKGKRYYVRRSFFFRGKKREKSKSGLTTLPQARAALVELEQQIQEQELGINTNLTLDQYWDIYSEKRLSTGRWNDTSYYLNDNLYKNHIKAKFGSTLLKNLDRNEYELFIAEKLQNHTRYTVQTLNSSFMALLNDAVKNGNLLSNRLKGVFIGQSDIPAANKKVTLKEFKTWIAKAEEIMPKQFYALTYLTIFGLRRGEVFGLRPMDITQNDSGRAILHLRDSRSNQTLKGKGGLKTKDSERYVCLDDIGTDLIYYLIAEASKIKRKLGIIKEQHKDYITINEKGGLINPNQLNRNFNLVNEATGLHVTPHMMRHFFTTQSIIAGVPLEQLSQALGHTKVYMTDRYNQVEDELAEATTDLFLSHIR*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0004	shell	direct	high	1148	0.999	GCA_000147095.1_00048
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	40840	41754	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	3839	4753	GCA_000147095_1_1_44	GCA_000147095_1_1_44	-	2240045	.	pfam08797	HIRAN domain. The HIRAN domain (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognizes features associated with damaged DNA or stalled replication forks	MKIGMRKPSLTRSLKARTTSKWKRQAKKALIPGYGKKGMGWVKNPKKAMYNKVYHKTTFGLSDLFKSSKKRKKKVVNNKQQSILASNGKKQHTPKEYKEAGLVFMVLGAIFLFLFPPLGFFLFITGFITYIIGRLTAKREKKQKVENYSPQIDTIVFRDNFLLMGTNYHQEEAEIAADFLSKGVHYFGKDNKSLKSYMLETYKPVYKYNKLKTVDVQLLPEPSNPHDKNAVKVLVNNIFVGYLPAVIASQISSYISNPNYRYDAILTGRGGPYKTLNIETERVVSRKSDLTYYLDLTVWRLAKK*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0005	cloud	direct	high	914	0.999	GCA_000147095.1_00049
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	41767	42501	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	4766	5500	GCA_000147095_1_1_45	GCA_000147095_1_1_45	-	2240045	.	PDB:2FJR_A	Repressor-protein-CI	MNVGERIKQRRKALKMSADELAESVGVSRSTIFRYEKGDIEKVGPEVLKKIADKLNVSPGDLMGWEDNQQELKIPTSPLVHKITEKVVKLSTPRKQKVLNYANEQLKEQNNKVITIEEKLFEYRVFEKLSAGTGFSYFNDGNYDTVFYDKDLDHDFASWVFGDSMEPKYMNGEVVLIKETGFDYDGAIYAVDWDGQTYIKKVYKEKDGLRLVSINNKYKDKFAPFEEDPRIIGKIVGNFMPIEN*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0006	cloud	direct	high	734	0.999	GCA_000147095.1_00050
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	42667	42882	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	5666	5881	GCA_000147095_1_1_46	GCA_000147095_1_1_46	+	2240045	.	PFAM:PF10078.8	transcriptional-repressor	MVNVSKLKGKIIERNTTQEALAKDIGIDKSTFYRKMKQNGSFSIQEVNLIVSSLGLSKDEALSIFFSETVA*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0007	cloud	direct	high	215	0.995	GCA_000147095.1_00051
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	42910	43620	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	5909	6619	GCA_000147095_1_1_47	GCA_000147095_1_1_47	+	2240045	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTVMFDDEPWFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIATAGQMRNQTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMKLNSFDEG*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0008	shell	direct	high	710	0.999	GCA_000147095.1_00052
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	43633	43890	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	6632	6889	GCA_000147095_1_1_48	GCA_000147095_1_1_48	+	2240045	.	PFAM:PF09035.9	Excisionase	MDNVLLSLSEWIKSIIKDTITRLVEIEKDSDHYPELMDVNTTCEFLGIKYATFSDNYRYLKGFPKELPGKKWSKRAIKEWLSNQI*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0009	shell	direct	high	257	0.996	GCA_000147095.1_00053
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	43976	44296	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	6975	7295	GCA_000147095_1_1_49	GCA_000147095_1_1_49	+	2240045	.	.	hypothetical protein	MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIRGYNHAYERGREAERQEIRKNIRRPFKGFTYDNEPPIGLRPEPLALPEPKQSAIRFL*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0010	shell	direct	high	320	0.997	GCA_000147095.1_00054
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	44312	44608	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	7311	7607	GCA_000147095_1_1_50	GCA_000147095_1_1_50	+	2240045	.	.	hypothetical protein	MEELIEWLDNLIMIVKELEGRESTSRHFITIWENDYKNLLLVKEYLTDYEKLAKDYRYVTLKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0011	shell	direct	high	296	0.997	GCA_000147095.1_00055
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	44601	45407	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	7600	8406	GCA_000147095_1_1_51	GCA_000147095_1_1_51	+	2240045	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTSSGSEENILELFQSEFRRLLSGFEIEEINHLLNENNVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0012	shell	direct	high	807	1.0	GCA_000147095.1_00056
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	45395	45553	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	8394	8552	GCA_000147095_1_1_52	GCA_000147095_1_1_52	+	2240045	.	.	hypothetical protein	MGVLELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLVW*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0013	shell	direct	high	158	0.994	GCA_000147095.1_00057
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	45547	46317	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	8546	9316	GCA_000147095_1_1_53	GCA_000147095_1_1_53	+	2240045	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYRRNTEQQEEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLVFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKQYF*	rep_hall_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0014	shell	direct	high	770	0.999	GCA_000147095.1_00058
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	46332	46526	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	9331	9525	GCA_000147095_1_1_54	GCA_000147095_1_1_54	+	2240045	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISCSEEKKAMRFVSRGAAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0015	shell	direct	high	194	0.995	GCA_000147095.1_00059
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	46526	47200	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	9525	10199	GCA_000147095_1_1_55	GCA_000147095_1_1_55	+	2240045	.	PDB:5HEK_A	Adenine-specific-DNA-methyltransferase	MMKFLNGDCMDIMKQYPDNYFDLAIVDPPYFSGPEKRKFYGRKISPIGVSRLYGEISEWKIPNRDYFDELFRVSKNQIIWGVNYFDYSFGSGRIVWDKVNGQSSFSDCEIAYCSYHDSTRLFRYMWNGMMQGKSISEGHIQQGNKALNEVRIHPTQKPVNLYLWLLQTYAKEGDKILDTHVGSASSLIACGELGFDYVGCEIDKSIFNLAQQRLDAYEKQLKLF*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0016	cloud	direct	high	674	0.999	GCA_000147095.1_00060
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	47210	47428	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	10209	10427	GCA_000147095_1_1_56	GCA_000147095_1_1_56	+	2240045	.	.	hypothetical protein	MLNLYFVYNGHCKFYLGTFYNVDDLIEQMEDHQWSFSAITHPRFQKHIGQRTTRFDYGSKDCYYLATFSGGE*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0017	shell	direct	high	218	0.995	GCA_000147095.1_00061
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	47428	47733	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	10427	10732	GCA_000147095_1_1_57	GCA_000147095_1_1_57	+	2240045	.	.	hypothetical protein	MAKNILMDLAFENLHKCMGISDWKESDEVILVSSANKEQIESDESYHSAGKCNYLGKRICIFCEQVKRNNYITLHKSMLEKIIKTMESFTDAEQMKGEEND*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0018	cloud	direct	high	305	0.997	GCA_000147095.1_00062
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	47726	47818	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	10725	10817	GCA_000147095_1_1_58	GCA_000147095_1_1_58	+	2240045	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIELFKEFGMAILWLFLGYLVGERAARKER*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0019	shell	direct	moderate	92	0.989	GCA_000147095.1_00063
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	47824	47991	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	10823	10990	GCA_000147095_1_1_59	GCA_000147095_1_1_59	+	2240045	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGLVEVSYREAIERFLEDEVR*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0020	shell	direct	high	167	0.994	GCA_000147095.1_00064
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	47978	48187	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	10977	11186	GCA_000147095_1_1_60	GCA_000147095_1_1_60	+	2240045	.	.	hypothetical protein	MKYDKQAEIDGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLRKKNKELRRKLEELEDDGRVKAKS*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0021	shell	ambiguous	low	25	0.119	GCA_000147095.1_00065
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	48162	48476	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	11161	11475	GCA_000147095_1_1_61	GCA_000147095_1_1_61	+	2240045	.	.	hypothetical protein	MEELKQKVNEVYNWTVEDGKPQPPKQDLPQVVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKDWLPKSKEFDDWVGYSPSMAQVVIAVYLIYRGN*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0022	shell	direct	high	314	0.997	GCA_000147095.1_00065
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	48478	49152	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	11477	12151	GCA_000147095_1_1_62	GCA_000147095_1_1_62	+	2240045	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIKKLEERRTITGNFQGYVVWWKDVKEIFEQLAESEIGHADEAPRYVKNILARLRELPLHDREVWLKAIMSEFEQDFSHAKWREGYEQGKIEGMVEREKVIVPRFVAEWIEEARKACKDVVELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYLVTLKNRQPLVKSQSGSTLYFSQDITARNYKGTQKELEDANFGWVFDCEGIEIEEVE*	mmseqs_cdd	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0023	cloud	direct	high	674	0.999	GCA_000147095.1_00066
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	49152	49439	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	12151	12438	GCA_000147095_1_1_63	GCA_000147095_1_1_63	+	2240045	.	.	hypothetical protein	MTQTLEEGMKNQSKCIKIPMEIRPFDVGYRIVNKHGQALALKNGASIFALPSLAEKAIKKEFGKNDPDFDIEKHFVEEVAIVNLSKFHSYFEGVE*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0024	shell	direct	high	287	0.997	GCA_000147095.1_00067
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	49439	49627	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	12438	12626	GCA_000147095_1_1_64	GCA_000147095_1_1_64	+	2240045	.	.	hypothetical protein	MSCSENLKKEKELTAAISNFKIEVLQNDDKLSSLSLSNIKRQARDLYECLVWLQYNAEESGR*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0025	cloud	direct	high	188	0.995	GCA_000147095.1_00068
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	49624	49962	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	12623	12961	GCA_000147095_1_1_65	GCA_000147095_1_1_65	+	2240045	.	.	hypothetical protein	MSYDLEILVKIESGDYICIAEPKYSSPTYNLGRMFRVAMNWDFDQDTTYNIADVLDNIQRGISELERYPEKYVQYEPENRWGTVSVALEVLKSLKECILEQDIDTKYLYMRW*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0026	cloud	direct	high	338	0.997	GCA_000147095.1_00069
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	49964	50224	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	12963	13223	GCA_000147095_1_1_66	GCA_000147095_1_1_66	+	2240045	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MRRFIAIWILVSAGLNIWHMDRIRDLEEKKPMVVYKADNAGAEIFGRVVEKGRHGKLYTVTIRDYGIFVVTKEQFEKIRVGDEVLL*	mmseqs_cdd	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0027	cloud	direct	high	260	0.996	GCA_000147095.1_00070
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	50224	50682	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	13223	13681	GCA_000147095_1_1_67	GCA_000147095_1_1_67	+	2240045	.	.	hypothetical protein	MDDILQALAKMLNMTVDEVSSLLTTFKGNAPQIYEMFVKEKMFYDLFSLFQIMSIVIFSISAVVLAVLTLIYFTYDGGFVYSYDIRTGKTEEEIKLERIERKRKDLKIPLKISCISSSASLITLVIAIVLKATLAPNYIFIVNEILPKLTKR*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0028	cloud	direct	high	458	0.998	GCA_000147095.1_00071
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	50691	51074	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	13690	14073	GCA_000147095_1_1_68	GCA_000147095_1_1_68	+	2240045	.	.	hypothetical protein	MNTIEKVKQWFIDRDLENGRVVGLMVLSSKRRIYKMKRLGIIIGAVFVIVVSPFVVQYGWNEIITTIVPVGKITVWQALGMDALLSFIWPVLSSKKESEEDYSYAVKSSISKIITCAFLIWLASLFI*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0029	cloud	direct	high	383	0.997	GCA_000147095.1_00072
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	51086	51493	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	14085	14492	GCA_000147095_1_1_69	GCA_000147095_1_1_69	+	2240045	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRGLSIDEKSKGEWQYGHLIEDRGRAFIINEVVEANEQYITIGSWCPVNPATLGQSTGLRDKNGKEVFIGDIVKCTRGCLHEVYLEKEYGGTFIGGMPSIYLKGLLSGYAWTEDEEIIGNVYENPELLEDK*	mmseqs_cdd	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0030	cloud	direct	high	407	0.998	GCA_000147095.1_00073
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	51493	51729	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	14492	14728	GCA_000147095_1_1_70	GCA_000147095_1_1_70	+	2240045	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLFGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0031	cloud	direct	high	236	0.996	GCA_000147095.1_00074
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	51722	51898	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	14721	14897	GCA_000147095_1_1_71	GCA_000147095_1_1_71	+	2240045	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYQGDVFITLGTLAEISKETGIAERMLKYYTFASTQRRNPNGRAVVKIEVDDE*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0032	cloud	direct	high	176	0.994	GCA_000147095.1_00075
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	51891	52121	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	14890	15120	GCA_000147095_1_1_72	GCA_000147095_1_1_72	+	2240045	.	PDB:2FJR_A	Repressor-protein-CI	MNDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAQWEKEESVPDIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0033	cloud	direct	high	230	0.996	GCA_000147095.1_00076
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	52194	52622	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	15193	15621	GCA_000147095_1_1_73	GCA_000147095_1_1_73	+	2240045	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVVRRVSAQQDLELIAKAINNLSDMGYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0034	cloud	direct	high	428	0.998	GCA_000147095.1_00077
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	52912	53478	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	15911	16477	GCA_000147095_1_1_74	GCA_000147095_1_1_74	+	2240045	.	CDD:cd01192	site-specific-tyrosine-recombinase	MKKVEPIRDLDDIERIKDYLKNKSDRNYVLFMFGIYSGLRVSDIVPLQVKQVIADRIELKEKKTGKIRYFPISPPLRKEINRYIKDNQLAEYDYLFPSKKKKRTDGVRITHIGRVAVYQILQDAAKYVGLNHIGTHSMRKTFGYHHYKKNSNVAILQKIFNHSTPDITLGYIGYSQDELDQSILSFDY*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0035	cloud	direct	high	566	0.998	GCA_000147095.1_00078
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	53712	54056	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	16711	17055	GCA_000147095_1_1_75	GCA_000147095_1_1_75	+	2240045	.	pfam01844	HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	MNTNPLRADRSGPHRVAFEKNKKIILKTRNTCGICGQPVDKDLRYPHPLSPVIDHIVPVNKNGHPSDIANLQLAHWQCNRQKSDKLYADEKTNGTKVIGNRNLPQSTDWFKYKG*	mmseqs_cdd	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0036	cloud	direct	high	344	0.997	GCA_000147095.1_00079
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	54195	55658	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	17194	18657	GCA_000147095_1_1_76	GCA_000147095_1_1_76	+	2240045	.	PDB:2JES_G	Portal-Protein	MTLKGMGYLRKKLANYKMGVDTRYNQYAMQHNEIDVGITIPPQIRQQYRAVLGWAAKGVDSLADRLVFREFANDEFGANEIFAQNNPDVFFDSAILSALIGSCCFVYISQGDDDDAPRLQVIEASNATGVLDPITGLLTEGYAVLKRDDNGYAVLEAYFTSDVTWFYPKDGKPFAIGNPTGVPLLVPVIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERSDVTAEFYSFPQKYVLGLSQDAEAIDTWKATVSSLLTFTKDDEGDKPNVGQFTTSSMSPFTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGSGLLNVAYVATCLRDKFPYLRKQFNKTVVKWEPLFEADANMLTLIGDGVIKLNQAVPGYMDAETIRDLTGIKGDMNATPKIEEVEQKSTNSEDKQKNRIISTYEITSLLSNYQKGVLSKENGILLLTSTGMSKQEAEAMINKTELIVKEAADG*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0037	cloud	direct	high	1463	0.999	GCA_000147095.1_00080
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	55651	57042	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	18650	20041	GCA_000147095_1_1_77	GCA_000147095_1_1_77	+	2240045	.	PFAM:PF06152.10	minor-head-protein	MVEDIVPSLLKKIKSEFEGARLDSEVLKDLLSKLQHSKASYLDANQYAIEIGEILSKALGASLTNETLPDGKMYYNIAQRVLTDVLGRNYELVSDYTEQVQKNLNSEAKIGLTAQVPELNQDRIDGLVNRLASEESFDDVRWLLEEPVVNFTQSIIDDSIQKNAEFQHKSGLQPEIVRKSAYHCCEWCQEVQGTYKYPRVPKDIYRRHQRCRCTVDYDPKSGKVQNVWSKAWSKSDKSDKIEARKNIGIQSEVSQVRKLALQIGITSNPITKSLKKLTEEEIIQAISGGDKTKGSCSSLAFAYIGNKAGYTVLDFRGGKSCVFFGSIDKINMIGSLPGVKMHVAKNTNDFKAVKELLEKAENGKEYYLATGRHAAIIRKNDNLVEYLELQSKFVNGFKPFDDTVLKKRFKAKKSHAVRGHKYDVDSYLIDANSLKDNPEFHNILSFLNTAESKQMKGITGYEK*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0038	cloud	direct	high	1391	0.999	GCA_000147095.1_00081
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	57032	57271	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	20031	20270	GCA_000147095_1_1_78	GCA_000147095_1_1_78	+	2240045	.	.	hypothetical protein	MKSDYEEVNWSEYCYKENDDDKTWWVDTSWYAKGLMLITFDKKKFYNLFEDYPQNMTSEEIEIFDKENPFWEDFFSDRK*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0039	cloud	direct	high	239	0.996	GCA_000147095.1_00082
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	57324	57554	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	20323	20553	GCA_000147095_1_1_79	GCA_000147095_1_1_79	+	2240045	.	.	hypothetical protein	MGNTIYFLEKKSSLERGASVKEILEENLEASHDYTSVLVVSLDKDGEINLGYSWDSSLQALGMLDVAKNYILNVIN*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0040	cloud	direct	high	230	0.996	GCA_000147095.1_00083
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	57605	59017	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	20604	22016	GCA_000147095_1_1_80	GCA_000147095_1_1_80	+	2240045	.	PFAM:PF03354.14	Large-Terminase	MARKKLGNQNPTQSVILKYVKKNSKAKEAIEIYERTGLSCYAWQINLLTSIMAVDKDGLWVHQKFGYSIPRRNGKSELLYLFELWGLHNGLNILHTAHRISTSHSSFEKVKRYLEKMGYVDGEHFSSIRAKGQERIELFDGGGIVQFRTRTSNGGLGEGFDLLVIDEAQEYTTEQESALKYTVTDSSNPITIMCGTPPTPVSNGTVFTNYRKTCLFGKGKYSGWAEWSVSEEKEIDDVEAWYNSNPSMGYHLNERKIEAELGDDKLDHNVQRLGYWPEYNQKSAISETEWNELCVDSMPDLSGKLFVGVKYGQDGANVALSIAVRTVDERIFVETIDCQSVRNGNDWILDFVKRADVATIVVDGASGQKILDEELKKERMKSVILPTVKEIIVANSMWEQGIYQKTLCHAGQPSLKKITTNCEKRNIGSNGGFGYRSHFADMDISLMDSALLAHWACMTTKPKKKQKISY*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0041	cloud	direct	high	1412	0.999	GCA_000147095.1_00084
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	59094	59564	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	22093	22563	GCA_000147095_1_1_81	GCA_000147095_1_1_81	+	2240045	.	PDB:6B0X_d	Major-Capsid-protein	MKMSEFKTIETQEELDNIVKERLRREREKFGDYDDLKKRVSELESENGALKATVEETKQTIAKSDAQITELQGQVSNYETASLRTRIALQNGLPYDLADRLQGADEEALRADAERLAGFMRPATPQAPLRDTEPAIGDDKTMQMKQMLRDLQPKGE*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0042	cloud	direct	moderate	464	0.985	GCA_000147095.1_00085
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	59571	60467	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	22570	23466	GCA_000147095_1_1_82	GCA_000147095_1_1_82	+	2240045	.	PDB:3JB5_B	Major-Capsid-protein	MADNATKAGTLFKPELVKELISKVQGRSVLAKLSSQTPIPFNGVEQFIFNLEGNAQIVGEGEQKQAGKAKITSKVIKPLKFVYQARITDEFKYASEEKQMNFLSAYMDGFAKKIAEAFDLAALHGLEPKTMTDASFRTTNSFDGLITGNIVNYTEEHIDDNIDAAVQTIVAKGGEVTGIALSPTAGQALAKVKVNGVVQYPEFRFGQNPDSFYGMKSDINKNLTVTGGTAETDHAIVGDFQNRFKWGYAENIPMEIIEYGDPDGAGRDLKAYNEICLRAEAFIGWGILDEDAFARVKA*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0043	cloud	direct	high	896	0.999	GCA_000147095.1_00086
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	60473	60685	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	23472	23684	GCA_000147095_1_1_83	GCA_000147095_1_1_83	+	2240045	.	cd12935	LEM-like domain of lamina-associated polypeptide 2 (LAP2) and similar proteins. LAP2, also termed thymopoietin (TP), or thymopoietin-related peptide (TPRP), is composed of isoform alpha and isoforms beta/gamma and may be involved in chromatin organization and postmitotic reassembly. Some of the LAP2 isoforms are inner nuclear membrane proteins that can bind to nuclear lamins and chromatin, while others are nonmembrane nuclear polypeptides. All LAP2 isoforms contain an N-terminal lamina-associated polypeptide-Emerin-MAN1 (LEM)-domain that is connected to a highly divergent LEM-like domain by an unstructured linker. Both LEM and LEM-like domains share the same structural fold, mainly composed of two large parallel alpha helices. However, their biochemical nature of the solvent-accessible residues is completely different, which indicates the two domains may target different protein surfaces. The LEM domain is responsible for the interaction with the nonspecific DNA binding protein barrier-to-autointegration factor (BAF), and the LEM-like domain is involved in chromosome binding. The family also includes the yeast helix-extension-helix domain-containing proteins, Heh1p (formerly called Src1p) and Heh2p, and their uncharacterized homologs found mainly in fungi and several in bacteria. Heh1p and Heh2p are inner nuclear membrane proteins that might interact with nuclear pore complexes (NPCs). Heh1p is involved in mitosis. It functions at the interface between subtelomeric gene expression and transcription export (TREX)-dependent messenger RNA export through NPCs. The function of Heh2p remains ill-defined. Both Heh1p and Heh2p contain a LEM-like domain (also termed HeH domain), but lack a LEM domain.	MALYRDTKTGVIISAESVLGGDWVPVEDTAPSGADLTVAELKSSLDELGVDYDKGSKKSDLVALYEENKS*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0044	cloud	direct	high	212	0.995	GCA_000147095.1_00087
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	60689	61129	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	23688	24128	GCA_000147095_1_1_84	GCA_000147095_1_1_84	+	2240045	.	PFAM:PF09355.9	head-to-tail-adaptor	MGTFAKIEDLELLWRSLKFDERARAEALLEVVSNSLRVEAEKVGKDLDDMVAESVSFASVAKSVTVDIVARTLMTSTDHEPMTQVSESALGYSFSGSYLVPGGGLFIKDTELKRLGLKKKQRYGAIEIYDLPKRNPCHFNRQGGNW*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0045	cloud	direct	high	440	0.998	GCA_000147095.1_00088
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	61074	61412	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	24073	24411	GCA_000147095_1_1_85	GCA_000147095_1_1_85	+	2240045	.	PFAM:PF10665.8	Minor-capsid-protein	MTYLKGIPVILIDKVETGNDDFGHPIHRDVEIEVQNVLVVPTSSEDVINQMNLTGKKAEYTLGIPKGDTNKWENREVKFFGRKWRTIGIPQEGIESMIPLSWNRKVMVEVYE*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0046	cloud	direct	high	338	0.997	GCA_000147095.1_00089
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	61405	61641	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	24404	24640	GCA_000147095_1_1_86	GCA_000147095_1_1_86	+	2240045	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MSDMKFQLNSAGVSALLRSSEMQGILREKGQGIAERAGEGFELTVSPGQKRANAKISTTDIKSMARNKKHNILLKAMR*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0047	cloud	direct	high	236	0.996	GCA_000147095.1_00090
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	61638	61973	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	24637	24972	GCA_000147095_1_1_87	GCA_000147095_1_1_87	+	2240045	.	PDB:2LFP_A	tail-completion-protein	MIELVIKKFLDGQLDVPSFFEHKPNMPESYVILEKTGSGGSDYVHSATFAFQSYAPSLQKAAELNEKVKKVVEDLITVNEVSGVHHNSDYNFTDTETKQYRYQAVYDINYF*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0048	cloud	direct	high	335	0.997	GCA_000147095.1_00091
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	62040	62597	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	25039	25596	GCA_000147095_1_1_88	GCA_000147095_1_1_88	+	2240045	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MTTASASNVTAAKPKIGGAVSTAPAGTTLPTNAKTDLDAAFETLGYISDDGLTNANSPESKAIKAWGGQTVLSSQTEKKDTFKYKLIEGLNIKVLKEVYGPDNVSGTLETGITVKANGKELPEHCLVIDTLLKNGYVKRVVIPRGKVSEIGEISYKDGEPIGYELTITALPDNSENTHYEYIQGA*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0049	cloud	direct	high	557	0.998	GCA_000147095.1_00092
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	62603	62878	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	25602	25877	GCA_000147095_1_1_89	GCA_000147095_1_1_89	+	2240045	.	.	hypothetical protein	MEEILKGKTESGFEYKIPKKRLRNFYLMREASKMEKGDFEAAEKLLNLLFGKKQAEEFLSHLDDGDDFIDTEVLFADIKSIFESNKDLKKS*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0050	cloud	direct	high	275	0.996	GCA_000147095.1_00093
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	62890	63276	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	25889	26275	GCA_000147095_1_1_90	GCA_000147095_1_1_90	+	2240045	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MIALDEDALICDLAETYQIYDYKQLPLNQVAVFAYGLRDDSRIKQMMSDQIVPLETTLLASIVDRLSLSLWLKTKDGQKGVNRPASIAELLTKNNKEEGDERDYLVFESGEDFENYRKALLAKTGGED*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0051	cloud	direct	high	386	0.997	GCA_000147095.1_00094
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	63276	65741	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	26275	28740	GCA_000147095_1_1_91	GCA_000147095_1_1_91	+	2240045	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGKAYVQIIPSAKGISGMIQKEMGGEVASAGVSAGESLGSKMMGAVSGVIAAAGIGKAIGASINEGAALQQSLGGVETLFKDSADKVKGFANEAYKTTGLSANAYMENVTGFSASLLQSLGGDTDKAAETANMAMIDMSDNANKMGTSMESIQLAYQGFAKQNYTMLDNLKLGYGGTKQEMQRLLADAEKLTGVKYDINNLSDVYSAIHTIQENLDITGTTAREAATTFTGSFESMKSAAQNVLGKLSLGEDIQPALQALMETTSTFLFGNLIPMIGNILKQIPILILGGIKGVFSGIFGEGLGSIMGSIVTALGSAFLAFKAFSTVSGLLSGIPAVLTTIKTAVTGLFTVMSANPIGIAIAAIAGLTAGLVYFFTQTETGRQIWSSFVAWIKQAWQGIADFFVNLWSGISEGASTLWDGVVTAWNAVVTFFSDLWVRIQEAASVAWTAITTAVMAIVQPFIDGFMNIWNNISDGLTQIWEGIKMIFQGVWEFIKSIFLGAILIIINLVTGNFNQLGADLSLIWKGIKNSISMIWEGIKTYFSGVVDVIVGYGIAIFENFSTTLSTIWKGLSAAGKAIFDSFAQILSNIWNTIKSVASSAWEGLKSTVLGLIDGLVQGAKNAWESMKQGVRDLVSNVTSIFDGIRNIDLWSAGKAILDGFLGGLKSAWGAVTDFVGGIASWIRDHKGPIEYDRKLLIPAGNAIMQGLDRGLQDRFKDVKKSVSGMAGEISNAFSNDDFGLSGTPTIAKNIEASLAMPSAQIEAKDSQTVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0052	cloud	direct	high	2465	1.0	GCA_000147095.1_00095
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	65741	66439	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	28740	29438	GCA_000147095_1_1_92	GCA_000147095_1_1_92	+	2240045	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVAEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLEIKLNMQPFRYQKNVAPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNSLVFTGSVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0053	cloud	direct	high	698	0.999	GCA_000147095.1_00096
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	66436	74535	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	29435	37534	GCA_000147095_1_1_93	GCA_000147095_1_1_93	+	2240045	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNTPLNEAYNDEIVHLGNNTYQLTFRFPTSDTKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKGKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIEYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSFYHEWYGLDVRKKITKYTYSPMAKLLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFFKREKTITDAIELAKAKAEEVKQELSDTINQRFNSFDNGPLKETKRKAEEALRNAGASTLLAQEAKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQAEALSRTKNELAGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKQTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGVKSAQATYKETTTRRLSELTNLANGKASKSELTQTAKELASRIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGYNALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTIWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELSSKIASVQVGGRNYIRGTKRMMLARGLWASGTFRPSGAGTAKTIDVSDSPVTGFDKAIRLTSSNARDQIGIAQDGFYISQGTYTMSCWVKGRRGQKVKLQTYWQVNDNSGISPIFTLKDENWTKLSFTSARNRAGVASIGYVYLVNAEVGEYLDVLAPQLEDGSLATSSKEAPEDIEGQISTVESTFKQRANSLDAGVRSLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASRIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLDAGVRSLTEGLRTKVDISSLNVTAENIRQSVKRLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELSSKIASVQVGGINLLRNTASLLIGDRSKGCWMSASGGNGRAISVEVLDPPKKMIKNMIRVIENTNGGNKDLTQLVRLRIGEKYTISCYARIASDSPNANVNLLFRSWANNTDLNRKFQKSISHKNWQKYSFTFTADAIENSIQFGQSGAGIIEICAPKIESGTLATDYSEAPEDIEGQISTVESTFKQRANSLDAGVSRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNISNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNATNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDVVADANKKLEATQTKMTLLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTGNFEAGSVTTTILDAEAVTAEKLKVDNALIRKLTANDAFIDQLISKRIFSIKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPKIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA*	hallmark_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0054	cloud	direct	high	8099	1.0	GCA_000147095.1_00097
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	74532	74648	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	37531	37647	GCA_000147095_1_1_94	GCA_000147095_1_1_94	+	2240045	.	.	hypothetical protein	MNNNMLTNIALKAIQELALENRKRTHRLENLENEHRTA*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0055	shell	direct	high	116	0.991	GCA_000147095.1_00098
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	74629	74832	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	37628	37831	GCA_000147095_1_1_95	GCA_000147095_1_1_95	+	2240045	.	.	hypothetical protein	MNTEQLNQALQMTISEMSTTSTNSMITSNILSIQLNEQREENQRLQARVDELEALLDEQTKPADKGE*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0056	shell	direct	high	203	0.995	GCA_000147095.1_00099
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	74835	75185	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	37834	38184	GCA_000147095_1_1_96	GCA_000147095_1_1_96	+	2240045	.	.	hypothetical protein	MAETIQNTDNLLDLAKITEPFDLASALRYMKENGEFIRCKNVSDDFYMYRDVQKRPVIVNGRRQLKDVETVWAFNQWGGTIATINVAVLLNHEFYIMKFDAEGNPDWTDPTVKPKE*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0057	shell	direct	high	350	0.997	GCA_000147095.1_00100
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	75195	75611	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	38194	38610	GCA_000147095_1_1_97	GCA_000147095_1_1_97	+	2240045	.	PFAM:PF05105.11	Bacteriophage-holin	MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLLRKISGVLLLMILIPASVLLPEKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0058	shell	direct	high	416	0.998	GCA_000147095.1_00101
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	75615	75950	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	38614	38949	GCA_000147095_1_1_98	GCA_000147095_1_1_98	+	2240045	.	PFAM:PF09682.9	Phage-holin	MQQITEIITNGAISILVILAGVVVRAVKDYLVQKGGEKTIKIVEILAKNAVNAVEQVASETGFKGDEKLEQARAKVRAELTKYNISMTDKDLDTFVESAVKQMNDAWKGQE*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0059	shell	direct	high	335	0.997	GCA_000147095.1_00102
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	75950	76906	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	38949	39905	GCA_000147095_1_1_99	GCA_000147095_1_1_99	+	2240045	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDRNRLRTGLPQVGVQPYRQVHAHSTGNRNSTVQNEADYHYRKDPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNTESYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTGSLAGIKTHEYCTNNQPNNHSDHVDPYPYLAKWGISREQFKHDIENGLTIETGWQKNDTGYWYVHSDGSYPKDKFEKINGTWYYFDSSGYMLADRWRKHTDGNWYWFDNSGEMATGWKKIAEKWYYFNEEGAMKTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYLKPDGTLADKPEFTVEPDGLITVK*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0060	persistent	direct	high	956	0.999	GCA_000147095.1_00103
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	77176	77355	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	40175	40354	GCA_000147095_1_1_100	GCA_000147095_1_1_100	-	2240045	.	PFAM:PF04936.11	transcriptional-regulator	MREVIQELLDSSMSTSAISQGAGVPWTTVSDLRKGKTSMDKMALLTAEKLYEFATTDKQ*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0061	shell	direct	high	179	0.994	GCA_000147095.1_00104
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	77357	77653	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	40356	40652	GCA_000147095_1_1_101	GCA_000147095_1_1_101	-	2240045	.	.	hypothetical protein	MKLNKEDWLRLLEKAIDNIPETVTAIASLVTAITVARQNKKRKPKSRQRKKVNAKRLGRKPLTPLFYQMERGNAMVSAIAIFIIAINVYIYLKNKKDK*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0062	cloud	direct	high	296	0.997	GCA_000147095.1_00105
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	77928	78395	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	40927	41394	GCA_000147095_1_1_102	GCA_000147095_1_1_102	+	2240045	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MYYTLEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGGAGSLYNILTDERLNHRVEVEIGILEDECAAIMQDFFRNRRKK*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0063	persistent	direct	high	467	0.998	GCA_000147095.1_00106
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	78581	79024	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	41580	42023	GCA_000147095_1_1_103	GCA_000147095_1_1_103	+	2240045	.	PRK13956	dUTP diphosphatase. 	MKIRGFELVSSFTDENLLPKRETAHAAGYDLKVAVRTVVAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFATFLIADGDAADGVRTGGFGSTGH*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0064	persistent	direct	high	443	0.998	GCA_000147095.1_00108
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	78984	79541	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	41983	42540	GCA_000147095_1_1_104	GCA_000147095_1_1_104	+	2240045	.	2AXN_A	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type	MAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCATGFPLRVEPLLHEWQVYKTGIENFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYREHQTVVVVAHRMLMRQFVPNEKIDFCQVIECELEI*	hhsuite_tools	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0065	persistent	direct	high	557	0.998	GCA_000147095.1_00109
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	79654	80916	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	42653	43915	GCA_000147095_1_1_105	GCA_000147095_1_1_105	+	2240045	.	PDB:3BH0_A	Helicase-ATPase	MEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPQNSLTGITLPKEIQVIGVTTIQEVLKKVFA*	rep_hall_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0066	persistent	direct	high	1262	0.999	GCA_000147095.1_00110
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	80989	81486	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	43988	44485	GCA_000147095_1_1_106	GCA_000147095_1_1_106	+	2240045	.	cd03379	Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity.  Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	MSYFEQFMQANQAYVALHGQLNLPLKPKTRVAIVTCMDSRLHVAQALGLALGDAHILRNAGGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFENEPFQEYLKEELGVDVSDQDFLPFQDIEESVREDMQLLIESPLIPDDVIISGAIYNVDTGSMTVVEL*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0067	persistent	direct	high	497	0.998	GCA_000147095.1_00111
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	81507	82322	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	44506	45321	GCA_000147095_1_1_107	GCA_000147095_1_1_107	+	2240045	.	COG2339	Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Signal transduction mechanisms]. 	MYEEKQYFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLALFYMIPALYFLFRIGKKWELPKKVLILSLLGGMFLAGWLSSFANTYIHDLLGVLFPDSPFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKFLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIFLGLALGTHFLFNSPFVELETELPLAIPVVTAIALYGFYHAYCFVEKHNELMT*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0068	persistent	direct	high	815	0.999	GCA_000147095.1_00112
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	82467	83435	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	45466	46434	GCA_000147095_1_1_108	GCA_000147095_1_1_108	+	2240045	.	PRK02269	ribose-phosphate diphosphokinase. 	MSFSDLKLFALSSNKELAERVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGKHVFILQSTSSPVNDNLLEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLEVAGVDRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGSDYVVVSPDHGGVTRARKLAEFLKTSIAIIDKRRSVDKMNTSEVMNIIGKVEGKTCILIDDMIDTAGTICHAADALAEAGAVEVYASCTHPVLSGPATDNIQKSAIKKLVVLDTIYLPEERLIDKIEQISIAHLLGDAIVRIHEKRPLSPLFDIEKKI*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0069	persistent	direct	high	968	0.999	GCA_000147095.1_00113
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	83371	83850	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	46370	46849	GCA_000147095_1_1_109	GCA_000147095_1_1_109	-	2240045	.	PFAM:PF01610.16	Transposase	MEQLHFITKLLDIKDPNVQILNIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGIPTRILLRKRRFKCYHCSKMMVAETSDDVQSYFFSFYYITVLNLALLDSPLLSIYSEKRRKNLRIISGLVIKFFSQYRKVEKVVVFHEYVR*	common_virus_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0070	shell	direct	high	479	0.998	GCA_000147095.1_00114
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	83977	84210	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	46976	47209	GCA_000147095_1_1_110	GCA_000147095_1_1_110	-	2240045	.	.	hypothetical protein	MFSQLHMREEQVLLAQDYALETARAEDLEQGLERGKVEGRAERKLFAFLDIVRQGLLTSEVASQQLGMSVSEFEALL*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0071	shell	direct	high	233	0.996	GCA_000147095.1_00116
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	84534	84887	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	47533	47886	GCA_000147095_1_1_111	GCA_000147095_1_1_111	-	2240045	.	PFAM:PF04754.11	transposase	MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSNIHVLPSMPYSVQDFYTSIDVLAELDNGTQVIIEIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH*	phrogs_hmm	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0072	shell	direct	high	353	0.997	GCA_000147095.1_00117
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	85104	87773	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	48103	50772	GCA_000147095_1_1_112	GCA_000147095_1_1_112	+	2240045	.	CDD:cd08642	DNA-Polymerase-I	MVFFDSFLYNGCMDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVAKGLDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFAWSCGDKLYATDKLELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLLSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYDMEQPLAFVLAKMEIAGIVVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADGKIHTRYMQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKSYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKSELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK*	rep_hall_hmm	common_virus	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0073	persistent	direct	high	2669	1.0	GCA_000147095.1_00118
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	87858	88295	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	50857	51294	GCA_000147095_1_1_113	GCA_000147095_1_1_113	+	2240045	.	COG1832	Predicted CoA-binding protein [General function prediction only]. 	MSQEFINPSDGVIRQYLATSKTLAVVGLSDREETTSNRVTKEMQARGYKIIPVNPKTAGGEILGEKAYASLAEIPFPVDIVNVYRRSEFLPDVARDFLKADAKIFWAQLGLESLEAKEILRDGGCDDIVMNRCIKREHTRLIEEA*	mmseqs_cdd	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0074	persistent	direct	high	437	0.998	GCA_000147095.1_00119
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	88336	88584	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	51335	51583	GCA_000147095_1_1_114	GCA_000147095_1_1_114	+	2240045	.	.	hypothetical protein	MKIKEQTRKLAAGCSKHCFEVADRTDEVSSKHRFEVVDRTDEVSSKHRFEVVDRTDEVSSKHRFEVVDRTDEVSNIYTARRR*	.	hypothetical_protein	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0075	cloud	direct	high	249	1.0	GCA_000147095.1_00120
GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote	cenote	CDS	88613	89623	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C2	51612	52622	GCA_000147095_1_1_115	GCA_000147095_1_1_115	-	2240045	.	PF03601.14	Conserved hypothetical protein 698	MSFLSKNGAGILVCLLISILSWYLGGFFPVIGAPVFAIFMGMLLHPFLSSHKQLDAGLTFSSKKLLQYAVILLGFGLNISQVFAVGQSSLPVILSTISIALIVAYLFQRFFALDTKLATLIGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNDGFALFAGTAVNDTSSVTATASAWDSLYQTNTLESATIVKLTRTLAIIPITLFLSYWQSREQKNKQGLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIIMAMSAIGLKTNLVAMVKSSGKSIVLGAVCWIAIILTSLGMQTLIGIF*	hhsuite_tools	nonviral_gene	C2	52622	37002	89624	GCA_000147095.1|CP002176.1@region_37003_89624@tool_cenote_CDS_0076	persistent	direct	high	1010	0.999	GCA_000147095.1_00121
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1989513	1989779	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	1	267	GCA_000147095_1_1_2095	GCA_000147095_1_1_2095	-	2240045	.	5NCA_A	Competence protein ComGC	MLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQADGRITEEQAKAYKEYHDKNGVANRKVND*	hhsuite_tools	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0001	persistent	direct	high	266	0.996	GCA_000147095.1_02159
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1989781	1990038	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	269	526	GCA_000147095_1_1_2096	GCA_000147095_1_1_2096	-	2240045	.	.	hypothetical protein	MKILNIELANVEQTDLGFEHWVDVTYQVPILKNEYTVKLLLLMECRIEDQEVIEYLVSTWKYRDLVLHSVRMYEIEKSESFTILD*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0002	cloud	direct	high	257	0.996	GCA_000147095.1_02160
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1990270	1991226	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	758	1714	GCA_000147095_1_1_2097	GCA_000147095_1_1_2097	-	2240045	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDRNRLRTGLPQVGVQPYRQVHAHSTGNRNSTAQNEADYHYRKDPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNTESYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTDDLEGIKTHEYCTNNQPNNHSDHVDPYPYLASWGISREQFKQDIENGLSAATGWQKNGTGYWYVHSDGSYPKDKFEKINGTWYYFDGSGYMLADRWKKHTDGNWYYFDQSGEMATGWKKIAEKWYYFDVEGAMKTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYIKPDGTMADKPEFTVEPDGLITVK*	mmseqs_cdd	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0003	persistent	direct	high	956	0.999	GCA_000147095.1_02161
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1991226	1991561	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	1714	2049	GCA_000147095_1_1_2098	GCA_000147095_1_1_2098	-	2240045	.	PFAM:PF09682.9	Phage-holin	MQQITEIITNGAISILVILAGIAVKAVKEYLVKKGGEKTIKIVEILAKNAVNAVEQVAAETGYKGDEKLAQARAKVRAELTKYNISMTDKDLDTFVESAVKQMNDAWKGQE*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0004	shell	direct	high	335	0.997	GCA_000147095.1_02162
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1991565	1991864	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	2053	2352	GCA_000147095_1_1_2099	GCA_000147095_1_1_2099	-	2240045	.	PFAM:PF10960.7	involved-in-bacteriocin-production-or-immunity	MPIEEAEKIAQSQVAWAILFILLFFIIIRYLIKTSDKREKKIMDLHEQSKADSNRREERLMTHLEKTTTELTTITHTVGDIQKEMVRMNDRMEEIEKGE*	phrogs_hmm	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0005	shell	direct	high	299	0.997	GCA_000147095.1_02163
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1991873	1992223	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	2361	2711	GCA_000147095_1_1_2100	GCA_000147095_1_1_2100	-	2240045	.	.	hypothetical protein	MAETIQNTDNLLDLTKITEPFDLASALRYMKENGEFIRCKNVSDDFYMYRDVQKRPVIVNGRRQFKDVETVWAFNQWGGTIATINVAVLLNHEFYIMKFDAEGNPDWTVPTVEPKE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0006	shell	direct	high	350	0.997	GCA_000147095.1_02164
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1992226	1992429	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	2714	2917	GCA_000147095_1_1_2101	GCA_000147095_1_1_2101	-	2240045	.	.	hypothetical protein	MNTEQLNQALQMTISEMSTTSTDSMITSNILSIQLNEQREENQRLQARVDELEALLDEQTKPADKGE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0007	shell	direct	high	203	0.995	GCA_000147095.1_02165
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1992410	1992526	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	2898	3014	GCA_000147095_1_1_2102	GCA_000147095_1_1_2102	-	2240045	.	.	hypothetical protein	MNNNMLTNIALKAIQELALENRKRTHRLENLENEHRTA*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0008	shell	direct	high	116	0.991	GCA_000147095.1_02166
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1992523	1999803	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	3011	10291	GCA_000147095_1_1_2103	GCA_000147095_1_1_2103	-	2240045	.	PDB:3GUD_A	Neck-appendage-protein	MDALTRRQFDRAMFAKERTLAIRVGEYASRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHIEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKSLTVGMTTGRSLELDNVFITQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFIFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGFEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKARAEEVKRELSDTINQRFNSFDNGPLKEAKRKAEEALRNAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELDGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQAEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELSSKIASVQVGGRNYIRGTKRMMLARGLWASGTFRPSGAGTAKTIDVSDSPVTGFDKAIRLTSSNARDQIGIAQDGFYISQGTYTMSCWAKGRRGQKVKLQTYWQVNDNSGISPIFTLKDENWTKLSFTSARNRAGVASIGYVYLVNAEVGEYLDVLAPQLEDGSLATSSKEAPEDIEGQISTVESTFKQRADSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNVTKDKASKSELTQTAEELASKIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHTALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKRTTNEWLFNFNQEGTVWIWIPKFEISDVDTSYSEAPEDIEGQISTVESNFKQRADSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNVTKDKASKSELTQTAEELASKIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHTALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKRTTNEWLFNFNQEGTVWIWIPKFEISDVDTSYSEAPEDIEGQISTVESNFKQRADSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNISNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNATNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWXVENINSAGDIISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTGNFEAGSVTTTILEAEAVTAEKLKVDNALIKKLTATDAFIDRLISKRIFSIKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPKIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0009	cloud	direct	high	7280	1.0	GCA_000147095.1_02167
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	1999808	2000158	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	10296	10646	GCA_000147095_1_1_2104	GCA_000147095_1_1_2104	-	2240045	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGEISQLLHAVSSKFFEVSYPDPMDGQVTKTFYVGDRTAPSYTFTEKLKPWSGAKFNLVER*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0010	shell	direct	high	350	0.997	GCA_000147095.1_02168
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2000167	2003820	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	10655	14308	GCA_000147095_1_1_2105	GCA_000147095_1_1_2105	-	2240045	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKVREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSASMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIEDLGINVNVAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGDTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGKGGKGKGGGGGPFKDILPEVELTDMDNKFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIKRIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSITTIGLGIGVFLAESIANGLGRQKERIIRALVALFDNVGNLSEAVGNIAQDFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFTVFSDWCKENKEPILALITTWQTINFLSWAEQAGGLAGAFSLLGSKVSLIVGGIKNLGLAIKALTFDKLVSFGETIYLNTLYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHAAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITWIIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICRAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQAWDAIVNIFSGIGEWFSGVFQGAWDAIVNIFTPIGSWFGQRWADVTSALANIGAWFTDIFQKAWTGLTNIFSKLGLWFGERWADVTSVLANVSSWFGNMFTSAYNAVKNAFSSIGGFFSGVWSTVQSIFVNAGQKVGSAVGGAFKSAVNAVLGTIENVVNGFIGMINGVLGVVRNLPGLGWVGSVSTVSLPRLARGGIVDSPTIAMIGEAGKEAVVPLENTGFIQTLGRVVSSAVVNAMAGISPQGGFSSDGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0011	shell	direct	high	3653	1.0	GCA_000147095.1_02169
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2003807	2004157	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	14295	14645	GCA_000147095_1_1_2106	GCA_000147095_1_1_2106	-	2240045	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKTQERKEKIIDSYRLSQMISNHVSLLLSNDAKIVEFWEYAPELFVEEQQAVELERQKQALLLHKERMREFAERHNRKRKEEVNGNS*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0012	shell	direct	high	350	0.997	GCA_000147095.1_02170
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2004196	2004576	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	14684	15064	GCA_000147095_1_1_2107	GCA_000147095_1_1_2107	-	2240045	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALKYTTWKVTDEKELKLRLTSHQAATVEEKIGMNLLKIFMPEAGEEFTLPPLKVMLLLVHGALQQYEHGYSFEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKDKKTSKKKMTVVK*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0013	shell	direct	high	380	0.997	GCA_000147095.1_02171
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2004581	2004994	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	15069	15482	GCA_000147095_1_1_2108	GCA_000147095_1_1_2108	-	2240045	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYGEAKGTYTKLVGLKEVPEFGIELEKVENTTLEDTVKKYEFGIGDIGELEYKFSYNNSSATAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIGFTLKIALQSELEFTDGVGG*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0014	shell	direct	high	413	0.998	GCA_000147095.1_02172
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2004997	2005365	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	15485	15853	GCA_000147095_1_1_2109	GCA_000147095_1_1_2109	-	2240045	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLDSELVFQFRMEN*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0015	shell	direct	high	368	0.997	GCA_000147095.1_02173
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2005362	2005877	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	15850	16365	GCA_000147095_1_1_2110	GCA_000147095_1_1_2110	-	2240045	.	PFAM:PF04883.11	putative-tail-component	MSGLLGADRLIAKCRRLASKKTGEDIVLRAVHNATIKVVQADARRLAPARDGELITSIKTRAKMDGDKAIGEVYTNLKYAPYVEFGTGPIGQASHSGISPEVSVTYKSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISNYVRRKIREQIK*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0016	shell	direct	high	515	0.998	GCA_000147095.1_02174
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2005852	2006190	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	16340	16678	GCA_000147095_1_1_2111	GCA_000147095_1_1_2111	-	2240045	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVAKEGYVKEAETIRLELWPASSKLQSELYGERVNDILNANANKSATIKVKDGVCIDSQTEVTHRVISKKVYTHHQVLELERVRATRGR*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0017	shell	direct	high	338	0.997	GCA_000147095.1_02175
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2006171	2006482	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	16659	16970	GCA_000147095_1_1_2112	GCA_000147095_1_1_2112	-	2240045	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKLTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSLLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0018	shell	direct	high	311	0.997	GCA_000147095.1_02176
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2006484	2006672	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	16972	17160	GCA_000147095_1_1_2113	GCA_000147095_1_1_2113	-	2240045	.	.	hypothetical protein	MKFKIKQDFYDWESNVKRLAGGELEITEERYVELADNIASNGVAISDVLEKILPEPEFLEED*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0019	shell	direct	high	188	0.995	GCA_000147095.1_02177
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2006662	2006844	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	17150	17332	GCA_000147095_1_1_2114	GCA_000147095_1_1_2114	-	2240045	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQVSQYSDLENKTLEELKNLAKEAGIAGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0020	cloud	direct	high	182	0.995	GCA_000147095.1_02178
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2006856	2007698	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	17344	18186	GCA_000147095_1_1_2115	GCA_000147095_1_1_2115	-	2240045	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDQLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHITETPTTLAAIDKALEIFEDEEDAQYVAIINPKDAIKLKTDVAKEWTKGSELGADMVVSGTFGEVAGVQIVRSKKVDEGKGFIVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDEHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0021	cloud	direct	high	842	0.999	GCA_000147095.1_02179
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2007704	2008288	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	18192	18776	GCA_000147095_1_1_2116	GCA_000147095_1_1_2116	-	2240045	.	PDB:6B0X_d	capsid-scaffolding-protein	MSEEINATVSTESTETVDTQGNVDTVQEEKHERTFTRAEIGKMLSAERSKWEAEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0022	shell	direct	high	584	0.998	GCA_000147095.1_02180
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2008515	2008766	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	19003	19254	GCA_000147095_1_1_2117	GCA_000147095_1_1_2117	-	2240045	.	pfam19791	Family of unknown function (DUF6275). This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria and their phage. Proteins in this family are approximately 90 amino acids in length.	MLEKAKQLASQEFSRLSGREIKAEDCFVVWFSKTLQNWKALVSTNAITSSEPCGDYAEITHNGDKNETYVDVYAKVSNRAIKD*	mmseqs_cdd	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0023	cloud	direct	high	251	0.996	GCA_000147095.1_02181
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2008768	2009031	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	19256	19519	GCA_000147095_1_1_2118	GCA_000147095_1_1_2118	-	2240045	.	PFAM:PF14083.5	nucleotide-pyrophosphohydrolase	MKYRKKPVVVEAVQFLDTEESIDELCDFGLDPVRIDYADLKNPLLKIETLEGLMVATEGDYIIKGVQGEYYPCKPDIFAETYEKTEE*	phrogs_hmm	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0024	cloud	direct	high	263	0.996	GCA_000147095.1_02182
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2009074	2009487	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	19562	19975	GCA_000147095_1_1_2119	GCA_000147095_1_1_2119	-	2240045	.	TIGR00691	(p)ppGpp synthetase, RelA/SpoT family. The functions of E. coli RelA and SpoT differ somewhat. RelA (EC 2.7.6.5) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (EC 3.1.7.2) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. [Cellular processes, Adaptations to atypical conditions]	MIDIALAIAKKAHAGQVDKAGVDYIQHPLYVASQVNTEQEKAVALLHDVIEDSDITAADLFASGLSNEVVTAVQILTKKKGQSYQEYLGKVKSNNLARVVKLADLKHNSDLSRLKSVTNTDYERVKKYKNAIYYLST*	mmseqs_cdd	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0025	shell	direct	high	413	0.998	GCA_000147095.1_02183
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2009484	2009693	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	19972	20181	GCA_000147095_1_1_2120	GCA_000147095_1_1_2120	-	2240045	.	.	hypothetical protein	MKDIKYYRTTTNNAQVLRLIDGVMQVFDIEKKWVNSMDWFNKIFFNDFTDFEEISENDAFTYIDRMVAA*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0026	shell	direct	high	209	0.995	GCA_000147095.1_02184
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2009695	2011278	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	20183	21766	GCA_000147095_1_1_2121	GCA_000147095_1_1_2121	-	2240045	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVEARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLISLMTGRDTRETAQAIAERFNVGQNDARRLVRTESAFFHNQMELLNYEEADIEKYIFVAVLDKRTSRICQEHDNQVYDRDKAVPGVNCPPMHPWCRSTTVGYDEDADYSKLKRRARNPETGKVEYVPADMTYKEWYSEYVAKRKQKGYNQGTRETKARFYSEQLLSKISKAEPKITSDMQRIAGENKLAGLEFRKKTAESLARKITTDSQAENISLSKATSKINDALRYTTIFDPDTFAKEYLKMKQELIAEGYKIVKVKNTWLVDGPYKGVNTVVEKDGINFEMQYHTQESFDLKNGSLHELYEKYRDTNTSDLERMKLFKEMLDLSNGLEIPKNIERVK*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0027	shell	direct	high	1583	0.999	GCA_000147095.1_02185
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2011241	2012710	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	21729	23198	GCA_000147095_1_1_2122	GCA_000147095_1_1_2122	-	2240045	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITIHSTEGSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKHQAEVFTENLHYHMVLRSTDSGTTQSEEATPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVAMEFKLMGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNQDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRSVR*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0028	shell	direct	high	1469	0.999	GCA_000147095.1_02186
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2012722	2014020	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	23210	24508	GCA_000147095_1_1_2123	GCA_000147095_1_1_2123	-	2240045	.	CDD:COG1783	Large-Terminase	MSQTYQIKQSDIVIDLPKTVGAGYGQFWRSRNLYRVVKGSRGSKKSKTTALNYVVRLLKYSWANLLVIRRYSNTNKQSTYTDFKWACNVLGVTHLFKFNESLPEITIKATGQKILFRGLDDELKITSITVDIGSLCWAWFEEAYQIETEDKFSTVVESIRGSLDVPDFFKQITVTFNPWNERHWLKRVFFDEETRRADTFATTTTYKCNEWLDGVDIKRYEDLYHTNPRRARIVCDGEWGVAEGLIYENVTVKDFDKDELLRDSANKLCIGLDFGFTHDPTALCCSLINDTTKEIYVFDEAYKVGLITKEVAKMIKDKGYHRSQIIADSAESRLIEELRSEHGISRIKESRKGKDSIMAGVSKLQGYAIYVHPDCKNIMDEFYSYCYQRDKEGNWLNKPEDKNNHLMDALRYSLQCIEGGKATVRRRSDYGL*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0029	shell	direct	high	1298	0.999	GCA_000147095.1_02187
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2013998	2014477	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	24486	24965	GCA_000147095_1_1_2124	GCA_000147095_1_1_2124	-	2240045	.	PFAM:PF03592.15	Terminase-small-subunit	MAFFDYSKGGDGKLSGLRIKQKRFADEYIISGNATEAYKKAGYRVSSDRVAGVEGHKLLKNPKIKSYIDERLKQLDSEKIADQQEVLSYLTSVMRGETQEQTLISIGELGQTITDINVGAKDRIKAAELLGKRHRLWTDKVEADVSGTVVFANESDIPD*	hallmark_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0030	shell	direct	high	479	0.998	GCA_000147095.1_02188
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2014912	2015334	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	25400	25822	GCA_000147095_1_1_2125	GCA_000147095_1_1_2125	-	2240045	.	pfam07374	Protein of unknown function (DUF1492). This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.	MNKAKELLKELQNLDMDIQSRIDEINELEAGLLSSPKWIDVKVQGGQARKVDDVYTQLVVMKEAIEQDTKEVINRKLELGRLINKLKNPKSRSILRVTYITKMYVDDICDKMEISRTTFYTWRNMAISELNEVLERMELN*	mmseqs_cdd	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0031	shell	direct	high	422	0.998	GCA_000147095.1_02189
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2015404	2015769	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	25892	26257	GCA_000147095_1_1_2126	GCA_000147095_1_1_2126	-	2240045	.	.	hypothetical protein	MKPKKYPYSGKMQKIPSPIFSARPIFNEVPIVEEVKVEFGVEASMGRIYPETLIHLDISGYGNRVHSVHRFPGILLSVGESIQLKMLFYKRLRNFTTDRFLTFRESDWKFFIRDLVNEFVR*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0032	shell	direct	high	365	0.997	GCA_000147095.1_02190
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2015766	2016140	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	26254	26628	GCA_000147095_1_1_2127	GCA_000147095_1_1_2127	-	2240045	.	.	hypothetical protein	MKERRQRLRKSGAFGGQRVRYFKILCIVLFASLLVACHQISSGTVVDKYIDEPHTTFIPVINGKSSVLVPTRTKRKYILVVSGFTGNKQVEERFEVTANEYKHYEIGNTFIQDAVLENKEEDKE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0033	shell	direct	moderate	321	0.856	GCA_000147095.1_02191
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2016342	2016521	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	26830	27009	GCA_000147095_1_1_2128	GCA_000147095_1_1_2128	-	2240045	.	.	hypothetical protein	MNKRQRKKKILNGLNKEERYHRTHCPVCDSEAGLFDRYFNTYGFCSEYCGYEYYGISRL*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0034	cloud	direct	high	179	0.994	GCA_000147095.1_02193
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2016514	2016909	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	27002	27397	GCA_000147095_1_1_2129	GCA_000147095_1_1_2129	-	2240045	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRVWHYELGRLMSVKCMFFQDSEIEEFELNDALMNDYITAYPDDIELMQSTGLKDKNGKEVFIGDIVKCTRGCLHEVYLEKEYGGTYIGGMPAVYLKGFGDGYAWTEYEEIIGNIYENPELLEVTHE*	mmseqs_cdd	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0035	cloud	direct	high	395	0.997	GCA_000147095.1_02194
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2016924	2017097	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	27412	27585	GCA_000147095_1_1_2130	GCA_000147095_1_1_2130	-	2240045	.	.	hypothetical protein	MEDEQNILETQLILGKQVLEIVLDLLKDDSKIGVVLPLNINDREFTITVEKEVTDRD*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0036	cloud	direct	high	173	0.994	GCA_000147095.1_02195
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2017097	2017306	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	27585	27794	GCA_000147095_1_1_2131	GCA_000147095_1_1_2131	-	2240045	.	.	hypothetical protein	MTKFVKIQSCYRGNTEDELINIDDISRICLGPNILFLRTPYNLGEHHISITQNSVDKLLKVLDIIGEVE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0037	cloud	direct	high	209	0.995	GCA_000147095.1_02196
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2017307	2017978	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	27795	28466	GCA_000147095_1_1_2132	GCA_000147095_1_1_2132	-	2240045	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKLNELIKKYKKLEGVWNAEGAELARQIFLQDLEQLDESEIGYADEAPRYVKNILARLRELPLHDREVWLKAIMSEFEQDFSRAKWREGYEQGKIEGMVEREKVKVPRFVAEWIEEARKACKDVVELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYLVTLKNRQPLVKSQSGSTLYFSQDITARNYKGTQKELEEAGLGWVFDCEGVEIEEVE*	mmseqs_cdd	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0038	cloud	direct	high	671	0.999	GCA_000147095.1_02197
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2017968	2018294	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	28456	28782	GCA_000147095_1_1_2133	GCA_000147095_1_1_2133	-	2240045	.	.	hypothetical protein	MEELKQKVNEVYNWTVEDGKPQPPKQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWVGYSPSMSQLVIAVYLIYRGSEDET*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0039	shell	direct	high	326	0.997	GCA_000147095.1_02198
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2018342	2018764	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	28830	29252	GCA_000147095_1_1_2134	GCA_000147095_1_1_2134	-	2240045	.	.	hypothetical protein	MTKTIELPDYYEPDWGNARYGTLEELKELLLYKRIVEWDKDFLLLEDGTKVTIEMSESDCCASAGGEFQNVSLDAVITNVEIGEQEEIPDHWGAGYKNKVTIFHNQNPVAIANCEAEHNGYYYSVGSLVIGDIHFPVVHA*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0040	cloud	direct	high	422	0.998	GCA_000147095.1_02199
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2018808	2019236	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	29296	29724	GCA_000147095_1_1_2135	GCA_000147095_1_1_2135	-	2240045	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKLTLNIEPKPQSRPRFARRGSFTTAYEDKDMKTWRNHCQLLIANQYMGQPILEGALRARLRFYIKPPQYISKVKKNQQALLDEIIPVGKKPDIDNYEKALYDSMSGIVFQDDGQIALHDVGKFYSLNPRIEVEVEVMEWNA*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0041	cloud	direct	high	428	0.998	GCA_000147095.1_02200
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2019233	2019562	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	29721	30050	GCA_000147095_1_1_2136	GCA_000147095_1_1_2136	-	2240045	.	.	hypothetical protein	MASKINATERIAIIIEKQKIEVVTTLNYDMSISFDNKDTAPTLDDNGDLFEPVYKCKVKAIPKNDVFFTSLTRVKSNIKTLQEVKKFFEFVNENRENLFEMAGFKGALE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0042	cloud	direct	high	329	0.997	GCA_000147095.1_02201
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2019576	2019785	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	30064	30273	GCA_000147095_1_1_2137	GCA_000147095_1_1_2137	-	2240045	.	.	hypothetical protein	MEWTDWVDWKPETKTDIKTKIENDGYTFPHYDKKNNGVKYVISTLDIKRDCLRLGVPFEDVYPLQTTLF*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0043	cloud	direct	high	209	0.995	GCA_000147095.1_02202
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2019751	2020257	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	30239	30745	GCA_000147095_1_1_2138	GCA_000147095_1_1_2138	-	2240045	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MSKIKILDACCGSRMFWFDKNESHTIFMDIRQETFEIHDKKVNVDPDIIGDFRDMPFEDNTFNLVVFDPPHLKWAGPNSIMKAQYGQLDKVTWSEDLAKGFEECLRVLKVGGTLVFKWSDRQINVKKLLEVIPFKPLFGQQRGTTHWLTFVKFEEDKNGVDGLGGLET*	mmseqs_cdd	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0044	cloud	direct	high	506	0.998	GCA_000147095.1_02203
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2020267	2020683	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	30755	31171	GCA_000147095_1_1_2139	GCA_000147095_1_1_2139	-	2240045	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLVAPPDLRKTPNNVSSLQGTLAVNRNFKNENGEREADFINFQAWRGTADIIAQYCSKGSLIGIIGRLQVRSYEKDGQRRYVTEVIAESVALLESRNSQHGQGNSFQNGNSSPFTDPNPFDLPNDGLPF*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0045	cloud	direct	high	416	0.998	GCA_000147095.1_02204
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2020680	2020778	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	31168	31266	GCA_000147095_1_1_2140	GCA_000147095_1_1_2140	-	2240045	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MNDFIKEIGMAILWMFLGYLLGERSTRGGQIR*	phrogs_hmm	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0046	cloud	direct	moderate	98	0.99	GCA_000147095.1_02205
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2020778	2021113	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	31266	31601	GCA_000147095_1_1_2141	GCA_000147095_1_1_2141	-	2240045	.	PF10957.8	Sporulation protein Cse60	MIKTVFFSCDYPHHEVIDDQINSWLAENPGIKLIDIKFQSNVSAVADSGVSAEYWHTSALIIYKVPSENNISSINSNGLGFIISCEKCGSLSIIKGKDVGQNVCYECKGEK*	hhsuite_tools	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0047	cloud	direct	high	335	0.997	GCA_000147095.1_02206
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2021106	2021609	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	31594	32097	GCA_000147095_1_1_2142	GCA_000147095_1_1_2142	-	2240045	.	.	hypothetical protein	MWVVSMTEIEKISEELAEYGVPDELIGKIEDLLATLYGEKRKLEIEKSWDISPESMGRVTMDIRKISDSVAIYSDGKKLQVIHNLGDEFILDFNVGEDSVWNLNGQVVEIIDMIEPVFKVFSFCSKSGEGMQRLKHAIVHFEKFEQYIRDNQEDLMIWWHNPGGEYD*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0048	cloud	direct	moderate	489	0.97	GCA_000147095.1_02207
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2021597	2022637	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	32085	33125	GCA_000147095_1_1_2143	GCA_000147095_1_1_2143	-	2240045	.	PF07083.11	Protein of unknown function (DUF1351)	MQELQVKVTQAQVEIIDREKFEQNINEVVAKYQNYTVTAATIKDDKQTLADLRKLDKQVSDERIRNKKVLSEPADEFDKYVKNAIQPLKDIITKIAGDVKEFEEHQKAVRIDTVKGYLANKSAEYMLDPRLFDEKALEYVKASDFMADGVTLKKATMKSLDDMVTFEFQKQQEFEKAKSAISGLCAEYGMTDSPYIRQLKDLTLAEVFGQIKADYEFEKQKEEIRQAQERAERESQELLAAQQTKQQEQAPKSTETPNFDPETGKILDGGQILQNEPNALRGAENDLKRYAQKMTLEVYFVDTAEKDCFKAGLSKLGFDFKKNYQVSGYQRIDPLTQAELNEQCGW*	hhsuite_tools	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0049	cloud	direct	high	1040	0.999	GCA_000147095.1_02208
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2022647	2023465	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	33135	33953	GCA_000147095_1_1_2144	GCA_000147095_1_1_2144	-	2240045	.	PFAM:PF03837.13	RecT-protein	MTNNQIVEAKGDFLTNPQLLNSGIIRKYLDPQGKASDEELAYFIAQAKAQNLNPFTKEIYFIKYGTQPAQIVTAKSAFEKKADSHPQFDGKEAGVIYLMDGEIKYSKGAFIPKGAEILGGWAKVYRKDRTYPTETEVSFEEYDNSKIRARVKELTQQGKDVTYPVMNSYGKPIGENNWDTMPCVMIRKVALVSAYREAFPAELGASYEADEIQLDNTPKDVTPQESREDVVARKMAEIEQFNKEQEANHADPEPTQNEDPIQGELLDGELEY*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0050	cloud	direct	high	818	0.999	GCA_000147095.1_02209
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2023502	2023618	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	33990	34106	GCA_000147095_1_1_2145	GCA_000147095_1_1_2145	-	2240045	.	.	hypothetical protein	MLMFDYDRDIMQPPEPREEHDPADWIFSAGQWIYVGDC*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0051	cloud	ambiguous	low	30	0.256	GCA_000147095.1_02210
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2023588	2023749	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	34076	34237	GCA_000147095_1_1_2146	GCA_000147095_1_1_2146	-	2240045	.	.	hypothetical protein	MTRIELENRVWLLANHEEKKRIAGSWANVKDQICEASSGTRKGVCSCLITTET*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0052	cloud	direct	high	161	0.994	GCA_000147095.1_02210
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2023742	2023996	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	34230	34484	GCA_000147095_1_1_2147	GCA_000147095_1_1_2147	-	2240045	.	.	hypothetical protein	MFKALKTIKKIKQLQKEMHAFSLAFLALQDMGLMPETERSKAKAQTMHDVSHMLKDVLGGKSVDEAMKRLNSEVKIEDVEQEDD*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0053	cloud	direct	high	254	0.996	GCA_000147095.1_02211
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2023989	2024192	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	34477	34680	GCA_000147095_1_1_2148	GCA_000147095_1_1_2148	-	2240045	.	.	hypothetical protein	MKLLTKLKLRLEVVLKAVNLDWREVAVELMTDLFEERKRRFAFEQENYDLKQQLAIYKEKEQGEQYV*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0054	cloud	direct	high	203	0.995	GCA_000147095.1_02212
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2024192	2024353	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	34680	34841	GCA_000147095_1_1_2149	GCA_000147095_1_1_2149	-	2240045	.	.	hypothetical protein	MKTVKKEWEPRIVNIMADGSQVDDLTGYVIPAGHSYYDIILGMNKQSNEEGVA*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0055	cloud	direct	high	161	0.994	GCA_000147095.1_02213
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2024425	2025141	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	34913	35629	GCA_000147095_1_1_2150	GCA_000147095_1_1_2150	-	2240045	.	PFAM:PF03374.13	KilA-protein	MNELINVTLNDNQEPVVSGRQLHEALGVNSRYTTWFDRMKEYGFTEGQDFLPNLGKSTGGRQATDHIIKLDMAKEIAMIQRTERGKQVRQYFIQVEKDFNSPEKIMARALLMADQKVHKLEAQIEADRPKVLFADAVSASHTSILVGELAKLISQNGYKIGANRLFSWMRENGYLIKRKGSDWNVPTQRSMDLKLFEIMETNVQHADGHITVNKTPKVTGKGQQYFINKFLNQEYLTG*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0056	cloud	direct	high	716	0.999	GCA_000147095.1_02214
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2025165	2025368	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	35653	35856	GCA_000147095_1_1_2151	GCA_000147095_1_1_2151	-	2240045	.	.	hypothetical protein	MRPRRYPYSGKKESTFVKADPELVEKLLRNTSFLECLQKKPINFQIDLEEFKRLSYEAIHDTSQVTQ*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0057	shell	direct	high	203	0.995	GCA_000147095.1_02215
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2025548	2025658	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	36036	36146	GCA_000147095_1_1_2152	GCA_000147095_1_1_2152	+	2240045	.	.	hypothetical protein	MAILHMAILHMAILHMAIFSNCIFKLRYLWITLSQD*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0058	cloud	ambiguous	low	40	0.36	GCA_000147095.1_02216
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2025618	2025980	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	36106	36468	GCA_000147095_1_1_2153	GCA_000147095_1_1_2153	-	2240045	.	PFAM:PF07261.10	DNA-polymerase-B	MQYIIRNTHGNYTSLNNAYAQDKRLKATTIGILTVILMNKSDWVVYPDEIARRLGISRRTVDEHFKLLEKAGYLRVYRLGLGRGKGVTVYRFFSDMPISDDYFEYLKTNLEKELSTDNGV*	rep_hall_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0059	cloud	direct	high	362	0.997	GCA_000147095.1_02216
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2026053	2026250	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	36541	36738	GCA_000147095_1_1_2154	GCA_000147095_1_1_2154	-	2240045	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MTLKTLRTLKNWRQSDAAAAVNVSVDTWGHWERGITEPSVSKAYQIASVFDVSVDDIIFLPDIAV*	mmseqs_cdd	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0060	cloud	direct	high	197	0.995	GCA_000147095.1_02217
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2026332	2026571	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	36820	37059	GCA_000147095_1_1_2155	GCA_000147095_1_1_2155	+	2240045	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMANPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0061	cloud	direct	high	239	0.996	GCA_000147095.1_02218
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2026564	2026734	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	37052	37222	GCA_000147095_1_1_2156	GCA_000147095_1_1_2156	-	2240045	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0062	cloud	direct	high	170	0.994	GCA_000147095.1_02219
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2026731	2026874	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	37219	37362	GCA_000147095_1_1_2157	GCA_000147095_1_1_2157	-	2240045	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLLKQVSHEIELRAMESRTV*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0063	cloud	ambiguous	low	5	0.035	GCA_000147095.1_02219
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2027269	2027391	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	37757	37879	GCA_000147095_1_1_2158	GCA_000147095_1_1_2158	-	2240045	.	.	hypothetical protein	MNELERTALNEILRTVTYIAEKVDELDSKISLNDSQVPEQ*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0064	cloud	direct	high	122	0.992	GCA_000147095.1_02220
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2027468	2027743	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	37956	38231	GCA_000147095_1_1_2159	GCA_000147095_1_1_2159	-	2240045	.	.	hypothetical protein	MNTLNEKAINIFKAVAKETLIQGTYEENFLYSQLEAFCTNCRQFAFGWTELAEEIERQERYLLDSGFTQEEIDDIRFDVAFAGMLDKLNVA*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0065	cloud	direct	high	275	0.996	GCA_000147095.1_02221
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2027905	2028672	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	38393	39160	GCA_000147095_1_1_2160	GCA_000147095_1_1_2160	+	2240045	.	PDB:2FJR_A	Repressor-protein-CI	MKVENKEIFANNLSFYMEQKGVDRNTLCADLDLKYTTVRDWLKGITYPRIGKIELLANYFNINKSDLIENKIFTAQPSDSLLEEITNTARKLNTDNKKIVLRTSEELLESQENEEETKINEVSENIIRLDDYRQTTYRRVTGVVSAGSGSIQDDDLDMEVSFYEDEIPDDYDAIAYVVGNSMEPKIKNGDYLFIKNTQQVDYNTIGIFQVDGANYVKKLRQGYLESLNPDYEDIHLDESNDIRTIGEVVSVYREK*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0066	cloud	direct	high	767	0.999	GCA_000147095.1_02222
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2028674	2028874	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	39162	39362	GCA_000147095_1_1_2161	GCA_000147095_1_1_2161	+	2240045	.	.	hypothetical protein	MSNESRPMEVIKHNLDCKCHRRREWIRVNDKWHAIEFSVDDPNEPPMTEEEKANVALILQQHLSKE*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0067	cloud	direct	high	200	0.995	GCA_000147095.1_02223
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2028810	2028980	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	39298	39468	GCA_000147095_1_1_2162	GCA_000147095_1_1_2162	-	2240045	.	.	hypothetical protein	MKIFSCHMPHAQTRQSFESVGLFLFAIISILETVGFILSISVVEELRPRWLSLPLS*	.	hypothetical_protein	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0068	cloud	direct	high	170	0.994	GCA_000147095.1_02224
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2029056	2030501	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	39544	40989	GCA_000147095_1_1_2163	GCA_000147095_1_1_2163	+	2240045	.	PDB:4BQQ_A	Integrase	MITTNKVAIYVRVSTTNQVEEGYSIDEQKDKLSSYCDIKDWNVYKVYTDGGFSGSNTDRPALESLIKDAKKRKFDTVLVYKLDRLSRSQKDTLHLIEDVFIKNGIEFLSLQENFDTSTPFGKAMIGLLSVFAQLEREQIKERMQLGKLGRAKSGKSMMWAKTSYGYDYHKETGTVTINPAQALTIKFIFESYLRGRSITKLRDDLNEKYPKHVPWSYRAVRTILDNPVYCGFNQYKGEIYPGNHEPIISKEEYDKTQSELKIRQRTAAENVNPRPFQAKYILSGIAQCGYCGAPLKIMLGVKRKDGSRLKKYECHQRHPRTLRGVTTYNDNKKCDSGFYYKDKLEAYVLKEISKLQDDADYLDKIFSGDNAETIDRESYKKQIEELSKKLSRLNDLYIDDRITLEELQSKSAEFISMRGTLETELENDPALRKNKRKADMRKLLNAEKVFSMDYESQKVLVRRLINKVKVTAEDIVINWKI*	common_virus_hmm	common_virus	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0069	cloud	direct	high	1445	0.999	GCA_000147095.1_02225
GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote	cenote	CDS	2030583	2031599	GCA_000147095.1	CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095.1_CP002176.1	GCA_000147095.1|CP002176.1	GCA_000147095_1_1	GCA_000147095_1_1@C138	41071	42087	GCA_000147095_1_1_2164	GCA_000147095_1_1_2164	-	2240045	.	3JC9_Cb	PilA, PilC, PilN, PilO, PilM	MDISQAFKLKRKKLATAKQKNIITLFNNLFSSGFHLVETISFLDRSALLDKQCVTQMRTGLSQGKSFSEMMESLGFSSAIVTQLSLAEVHGNLHLSLGKIEEYLDNLAKVKKKLIEVATYPLILLGFLLLIMLGLRNYLLPQLDSSNIATQIIGNLPQIFLGMVGFVSVGVLLALTFYKRSSKMRVFSILARLPFLGIFVQTYLTAYYAREWGNMISQGMELTQIFQIMQEQGSQLFKEIGQDLAQALQNGREFSQTIATYPFFKKELSLIIEYGEVKSKLGSELEIYAEKTWEAFFTRVNRTMNLVQPLVFIFVALIIVLLYAAMLMPMYQNMEVNF*	hhsuite_tools	nonviral_gene	C138	42087	1989513	2031600	GCA_000147095.1|CP002176.1@region_1989514_2031600@tool_cenote_CDS_0070	persistent	direct	high	1016	0.999	GCA_000147095.1_02226