core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	976602	978386	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	1	1785	GCA_000163755_1_7_773	GCA_000163755_1_7_773	+	1273609	.	PDB:2JES_G	Portal-Protein	MWALGSPHTTPCSQNGHAPNATRVTGGSTMQLTFRAVSVTSRHGAAAGAEGAARAGEDRDRERDGPGVRQDARPDTGRHAASSARRGSAAAGQGRVERDHAAHRPIGRVRLEQDRQRHRHQSLGGRDRRHAGSVDDTAPAGTQATGDEVNHMADEGIFSSALKRPLDVTSFGATRITGVADDDMPTVRTLMKVWRQRYPRNLIRTGYYGAKEGFKDFGISIPDRIKANVSACIGWPAKAVRSLADLTVFDGWVYANGTDPYGLDELTDLNALELAIPQTVVSAYTHGCAFLTLTGDPDTGDLLVTPRSAEWSAAIWDGRRNRLAAALTINDATSKGRVTAFNVFLPGVVYQIVRDSYGSWAAERYETHWPEPTVVPLISDPQLSKPLGTSRVTRPVMALTDMGFRTLVRMEASAEFYAVPKLWFLGMDEDAFSADTWSSLVSAINAISKDEDGDNPTLQQISQASMQPHSDMLKTIALVVASDTDLPVDSLGITLDNPSSAEAMAAAERKLTRRADRQNRLFGMQLTRLARMAVCLSDGLAEPPDEVETGKARVGSHPRNQRWGARRRVREDQSGQPVVCDQRSRPAPARIGRQ*	hallmark_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	978461	979906	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	1860	3305	GCA_000163755_1_7_774	GCA_000163755_1_7_774	+	1273609	.	PFAM:PF06152.10	minor-capsid-protein	MPVTTKDLNQLRTSQQEAVRLARLDLGELWWEISGLPAARQRDILLDLVPAIIRKHADASSTAAADWYERMYAKHFDDTFTAEVENPNDDEAVRKLIRWKAGILWDSPEKKANPDELLRYLNNLMDREIRNPGRQTIRRNARRDPHRPRYARVPNSRQPCAFCIMLASRGYVYASEDTADFGTSFHGGNCKCEIVPEWGKGSNRIEGYDPDEYLKIYETARKVLETGEIPDDLKAGLANIAPYREPKRGQGFYGPYDPNNVNSLAYFMRHMHPDKVRQGHKLAETGKQRKGVAGEKIRALKTMTPRTSLKEITHDEVNPMWDMWMKKKLDNGYAPNFSKNPWGINCQRVVQAAELRLRGYDVQAVGNHRNSADGYYWNIADMWVDENGNHRKFTQKHSNAVTIKAMREYPPGTRFFVAGPWKNGGAHLERRDHPETQWLEIPAHVRLPIGQLHGIRILQRQDSRQLSRRHQRQATPFPARG*	hallmark_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_938037195.1_00393
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	980390	981502	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	3789	4901	GCA_000163755_1_7_775	GCA_000163755_1_7_775	+	1273609	.	.	hypothetical protein	MDSYGNMMSMTGSWLVVGNYQATSVMTETLYDDFFKEQSINNHVYLICSASNVIIDKYESMGAGVRIWFHRFSLNGESINRDHLDIPRDLGFSQVSIIDDGLSVIADNLPMSGYEFLNNILKRIREFLLYAPNWESSHKIPKKKKKLIKKASEAFSRIICNYCVFDIQYIGQAFGSDDREVPRSATERLIEGHKTFTKILSVFQSRHKDKEVRILELDCEVQATSAMLSINSINGMDIGDKIKSNGMAFSKDYKSKVVTLEEAGLIRYFKPPFNKEFVDTFLSSTHVKKYAEFLKKSRFDHVGFNIDISQECMAIRRPEDDVIIDHISRSWNLDTKKMERTFGDAPIGQYPGDLFLGKILATNYSSTNLV*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_024105075.1_02159
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	981581	982054	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	4980	5453	GCA_000163755_1_7_776	GCA_000163755_1_7_776	+	1273609	.	PFAM:PF14265.5	head-scaffolding-protein	MAEDNDARNTGEQDSPPEGIDWKARYEAELERAKSWRGKAEANKNAADELAALKESQLTETQKLEARATRAEKKLNDLKTAQQRLTWRDEVARKTGVPVDLLRGETAEEINAHAQAIKTYMAAQVKPSAAKVADPAGTPDAAANPNVGLLKQLFGGK*	phrogs_hmm	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0004	cloud	indirect	.	.	.	GCA_020353915.1_00359
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	982084	982920	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	5483	6319	GCA_000163755_1_7_777	GCA_000163755_1_7_777	+	1273609	.	PDB:3GS9_A	tail-protein	MVLQTNQVTLPTSVSLAVVGKAHDTSTIATLSPADKLGFMDDKQQLLAETKAELKRRSTPTVSYEADVLTLAKAGMDTAGVALGDRVLLVDTTFTPDLRLAGRVLQLEEDLLDPALTVITIGNIIERFTASSHSAEQRLDRVIAGTATWQSTSQQVTQNASKWDQVAQTVVDNSDKWNTAAATLEQKSASWDNTSATLANKQPTWDTTAETVTAKSGMWDDAAVIAANHAQAIRQSTSGVTLHYENLAITLGDSISITDATGTWTFTDGAFVKQDTTE*	hallmark_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0005	shell	indirect	.	.	.	GCA_000741405.1_00523
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	982931	984181	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	6330	7580	GCA_000163755_1_7_778	GCA_000163755_1_7_778	+	1273609	.	PFAM:PF08400.9	minor-tail-protein	MARYEIEKYRTIETTLDLANDYTPAIRLNAGDTDGRILKFNITDGGNDVDDLNGLPAKLTWNRDPTDPNSGGGFTDMTKTAGTDNATGVYKVSFTAPVPRALLQDADWHVIASRNIPVIIEPARINAKASEIADPLRDLHDTIDEAKQMIAEASIDIGTVSTLAPSKKATGALTGTGVKRKLNLGIPRGSKISSVTVTALDTATPTVSTGTDSNGDTTITLGLPRGKQGEKGEKGDPGDAGGLATADKAGIVRPGPDFSIYSDGVLYLKDNARSYSQMGLYASPFDVGTLIVYRGMGIFYDPIITLSPNPGYRSATSIEGPVEIQVLPDTFEFSPIDTRVVRFVTMMLVSSRGLTDGVSRVGVKATPVKGTGNVSLEFFDSLEAATPYTLYVDTGSSGPNVCSPSFTFRVEGAARK*	phrogs_hmm	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0006	persistent	indirect	.	.	.	GCA_000024445.1_01448
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	984178	984534	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	7577	7933	GCA_000163755_1_7_779	GCA_000163755_1_7_779	+	1273609	.	.	hypothetical protein	MNLSTTHPLILILCTVIGSCVVTSIVSWLLRRIDQRRNLEQAIAESATIRRLELEIYRQSLFLPTTSRMQHEHQLEAGKAYAERGGNGPGHVRCQQLEDDYRHRLDTDDWNYQPHTHN*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0007	persistent	indirect	.	.	.	GCA_000024445.1_01449
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	984626	985378	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	8025	8777	GCA_000163755_1_7_780	GCA_000163755_1_7_780	+	1273609	.	CDD:cd06417	GH25_LysA-like-endolysin	MSRIRHRLLAATTLLLAMLTVTPSAMADMHGIDVSGWQSPTVTCTADYDFAVVKATQGTGFTNGYMTSQDNCVRQRGKSLGFYHYAGGGNVTAEADYFVNTVRPYIGRAVLVLDWEGYQNAAWGNSNWVRAFVNHVHARTDVCPLVYTSAAYLYQIPADVRSHCGLWVAQYANNNATGYQTRPWNYGRYGEAMRQYTSNGRIPGYAGPLDLNYFRGTTAQWNKNANPGNTTVTPTPAPTPQPQLAPDYGP*	common_virus_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000622145.1_02868
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	985677	985964	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	9076	9363	GCA_000163755_1_7_781	GCA_000163755_1_7_781	+	1273609	.	PFAM:PF06946.10	holin	MDISATTTLAAGIVALVAPALVQAFKKYIPADYVGLTSLGVSILLGVLAIAATNGFHGYGWGIVLTGVIGVAQAVYTLVNQAFSGKLSKDAKTNE*	phrogs_hmm	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0009	shell	indirect	.	.	.	GCA_000741405.1_00527
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	986175	986423	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	9574	9822	GCA_000163755_1_7_782	GCA_000163755_1_7_782	+	1273609	.	.	hypothetical protein	MNETFRLNVLLPSGEEIDTGGGLLELSGVLPPIGAGFYWRDKFYRVKDVFFNSDNSPDLGWWIALEDSSDDPRKAINSTYYR*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0010	shell	indirect	.	.	.	GCA_001053985.1_01018
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	986565	987221	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	9964	10620	GCA_000163755_1_7_783	GCA_000163755_1_7_783	+	1273609	.	COG1002	Type II restriction/modification system, DNA methylase subunit YeeA  [Defense mechanisms]. 	MAAQVKSKQRVGEHGEVFTNEREVNAMLDMVKQETERIDSRFLEPACGDGNFLSEVLRRKLAVVGERYGKSQLEYERYTFVAVSSIYGVDIMADNVEECRERLFGIVKDEYEQHFRNGCRPEVLDSIRYLLSKNILCGDALTLTDSEGEPIVFPEWSLVMGSKVKRRDFTFAALLNVSTQEPTFDMLDEIDEDEMGKVIPKPIREYPLTSFLEVAKYE*	mmseqs_cdd	nonviral_gene	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_024584435.1_01676
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	987214	988803	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	10613	12202	GCA_000163755_1_7_784	GCA_000163755_1_7_784	+	1273609	.	pfam07669	Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	MSSRLDLGNKSYNPDVLSCLANLSNDEVFTSPQLANKVLDLLPEEIWTDSSITFLDPFTKTGVFLREITKRLLIGLEPEFPDLQDRINHILNYQVWGIAITELTALLSRRTLYCSKKANSKYSIDSLFDNPDGHIHYKAIEHLWDGKNCVYCGASKQQYDRSSTLESYTYEFIHTFHPERILKNMQFDVIVGNPPYQLSDGGAGASAVPIYQKFVEQAKKMNPRFLSMIIPSRWFGGGRGLDLFRHDMLHDDQIRILHDFSDASQCFPGQEIKGGVCYFLWERDTHGDCKIYSHIGDDVIRSTRPLLEKGMETFIRDSRAIAILDKVKAMNESPMSASLNAGRYFGFHTRVKWDKDGRFGTLQTADGKGEYSISKIKDAGHPIKVYIAHGECWIAEKYVTRNTSDIRRYKVLIPRSGNPGSTIIGKPKISEPGSCSSNTYVVFFPASDSESAAVNAADYLRTKFVRYLISLRTSTQDMAPRAYEFVPTPDVSRHWSDAELFDKYGLTDEERKLIDESIPSMQMEDDGNA*	mmseqs_cdd	nonviral_gene	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_019704095.1_00117
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	988796	991318	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	12195	14717	GCA_000163755_1_7_785	GCA_000163755_1_7_785	+	1273609	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MPDNFFPQRLALTPTIYAYAIDDADHQGQLKVGYTDRDARTRILEQTKTAQVNFRIVLEESAMRDDGSAFDDHPVHKLLEQNFTRTGGEWFRCSVKDVRNAVEAVRERRDSMTQRTQSFGMRPEQRAAVEKTRAYFAQFEKDNPGKPPRFLWNAKMRFGKTFTSYEFAKAQGYKRVLVLTFKPAVENSWREDLESHKDFEGWQFISRETMLEEGGLDYEHADKTRPIVCFGSFQDYLGKNDMGGIKARNEWVHEVNWDLVIFDEYHFGAWRDSARELFEEEDKREQNDNMNSVAQIIDESFEQGDTDFLPITTGAYLFLSGTPFRAIANGEFIEEQIFNWTYSDEQRAKERWKPADGKNPYESLPRMVLMTYQMPDQIREIASGGEFDEFDLNEFFAAKGDGEDAEFKHPNEVQKWLDLLRGGFAETTVDMLKMGAKKPPMPYSDSRLKNILTHTFWFMPSVASCHAMANMLAQRQNVFYHDYTVNVCAGAGAGIGLEALGPVRASMADPLESKTITLSCGKLTTGVTVKPWTGILMLRNLKSPETYFQAAFRVQSPWTIDNPDGLHPNETAILKRECYVFDFAPTRALRQIADYSCSLHPDQSISPEQSVGEFIHFLPVLAYDGSSMKQVNATDVLDIASSGTSATLLAKRWESALLVNVDDLTLRNLMNNQRAMDALMSIEGFRSLNDDLEKIINKSEQIKEMKSKDEKPTKEEKKELRDAEKETKSLRKQVQEKLIKFATRIPIFMYLTDYREQTLKDVITKLEPELFKKVAGLTKGDFELLLSLNVFNPARMNDAVYKFKRYEDDSLSYAGIDKHEQDAQVGLFDTAIPAQEFEEM*	common_virus_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0013	shell	indirect	.	.	.	GCA_001053985.1_01021
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	991506	991898	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	14905	15297	GCA_000163755_1_7_786	GCA_000163755_1_7_786	+	1273609	.	.	hypothetical protein	MDFAAFIRLCLAHNDAVREAIAAKSRYEDNKRMYDDRLVNQDVRIAFENREREADAMLLDLQESYSRLIMRFPELKDDAWALLTNLPDRSDESMEEWRKCLSAFRTNVTRLYARNEKKSLLTWFQKIKRG*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0014	shell	indirect	.	.	.	GCA_001053985.1_01022
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	991902	993071	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	15301	16470	GCA_000163755_1_7_787	GCA_000163755_1_7_787	+	1273609	.	1F8Y_A	NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE	MASSSTLSWMEKDPFIKLFNRGGYVLDFNDFRFDAFTQESVGVPLLTRYGLSKGKSLEKFANEAPRNVVMKLFSDLMDYYEYDFIQQDDNDADYQRLYKRCKKILSSTAVQGGSKEAGMFFNVIIRLDESQAMPSDRMFEGTDPRIAARFRNYDGSPNFDLLRTLPTIAVREFYQDESAVARLGYLGSDPAHQLSEIIETFPAAKLNDILPRSGWLGSRTRWMVFAGDPYRLIGNMQENYQAIQNPAVVQFPQVSIEDKQIAVMMPFNSSYMTPDDDPVYRAIKAAGEQLGYSCVRADEIHTPTDIKDDIFKLIEGSKIIIADLSGGNRNVYYEMGLAHARGRIVIPISSDSGTLPFDIGHIRTVLFHRSTHGMEGLTHDLVQSLKAIG*	hhsuite_tools	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_900637835.1_01972
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	993151	993777	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	16550	17176	GCA_000163755_1_7_788	GCA_000163755_1_7_788	+	1273609	.	.	hypothetical protein	MQPKQGSERFVLNKDSSSGMAIVHRIDCGAIRHQVEQDVREELPRQDFIEIGQDSTGVSLYRESTRWDTFRYEASYVTRDELAQTGLRYRPCKICNPDLPSRSQVKSISIHAVDLKSHHLGKFFFGWGILERFVITCQLDKDERPEVFIDAYFDKETSHRFQPDDVLEYPRQIRTKTNEEPVPQSSDHPAVGEACLNRVCGSDTIQTQ*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0016	shell	indirect	.	.	.	GCA_001053985.1_01024
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	994053	995480	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	17452	18879	GCA_000163755_1_7_789	GCA_000163755_1_7_789	+	1273609	.	3GUE_A	UTP-glucose-1-phosphate uridylyltransferase 2 (E.C.2.7.7.9)	MTEKSLEACIEKMRSFDMGESAIGQFTRLYQSWQTDESEWIRESDVEPLQGIKHIGDIHETINHRVASRALSKTAMLKLNGGLGTSMGLQGPKSLLPVRRHKARQMNFLDIILGQVTTVRQQQGVKLPLTFMNSYRTSKDSITRIRRNRNFHQDEIPLEILQNREPKIEMSTGLPVSYPSNPDLEWCPPGHGDVFTALWESGLLDILQAEGMEYLFISNSDNLGARPSSTVSGAFAQSGATFMVEVARKTDADRKGGQIVRNKKTGCLMLREMTQVHPDDKDQATDVKVHPYFNTNNIWVRISALKKMLKKRKGVLPLPVIRNMKTVNPTDSSTKSVIQLETAMGAAISLFEDAVCVEVSRSRFLPVKTTNDLLILRSDRFHLTDAFEMEDGNYIFPDVNLDTRFYKNIEDFDERFPYSVPSLAAANSLTIEGDWTFGKDVHCFADAHLSDMGRPSYVPNGSFVGSQGIEPDSWQ*	hhsuite_tools	nonviral_gene	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0017	persistent	indirect	.	.	.	GCA_000239695.1_00545
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	995627	997597	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	19026	20996	GCA_000163755_1_7_790	GCA_000163755_1_7_790	+	1273609	.	6SJ9_A	Proteasome accessory factor B/C (PafBC)	MAEGSTNGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKAAFAKQFQRDRAKLTAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRIMTQFKPEDMPLLAAANYLARSVSANEQENMLRAKESQHKSRSTPRLAQTPTPGLGLDSIAPGLGTQKIPEVLTNIVDSRRFAATVEFEGENINVAYTDSDDLASYMLDHPGSLIIEPIEAREAYKRRLNAAKAFEPADLTMTDAAIPASQVEVIPTTELLKDDDELPKKQPTVQTGTEVDRRLHLMLFLSAHLGEEYSLSELAERFIGHPKSPEEERRYINTIRKDIGTLTTVSDDGEVAGSQFFEIDWPLLEDEGIVSATNSLGLERLAGVSPQYMSMLTASVSYLAHSPLMPDIDRKQAIDLYNRLHNYSKPGQTPWLSLTGFELAPASFPVVKHAIEHDQLLDMEYTDGSGRTRRRLVAPAKVFVDEGVYYLAAWTDVSDKDRKEPPTNPVPQEENPEPPHKRRNSQSFHWQTLRLSRIGNVQAVEPSHHIAIPEVPLSELREWNFENGTEAVFITNQKGMPFIKNLPGATVDDYEDGQKVHLIISSDSWFVAFCIAHARHITSVGPETLRSMIVARADRELTHIEQQEEADAKRSEHRRRRR*	hhsuite_tools	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0018	persistent	indirect	.	.	.	GCA_000269605.1_00501
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	997597	997968	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	20996	21367	GCA_000163755_1_7_791	GCA_000163755_1_7_791	+	1273609	.	.	hypothetical protein	MPGWGWVILVLAAVIIFILGLVFALLHFKKAMTTVSGTASAISKRISAMQEDSRDLAQRDMTPSFTKPIGQTAQAYSRAHSDIIARRDRRRSRHHETWKAWAQTDQKHIDQLAEQLNITEDED*	.	hypothetical_protein	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0019	persistent	indirect	.	.	.	GCA_000260715.1_00823
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	998035	1000713	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	21434	24112	GCA_000163755_1_7_792	GCA_000163755_1_7_792	+	1273609	.	PDB:2VA8_A	Helicase	MARHWRHKKAHKANNKANHQFESEKKEDRGEDDPVDMSIDRENLSPAQRYRAFQKSQEERKSLAGRFQESLPFELDKFQKRALRELEEGKNLLVAAPTGAGKTVIADFAIFLAQFHNVKAFYTTPIKALSNQKYHDLVKVYGSDRVGLLTGDMSINSQADIIVMTTEVLRNMLYEGSSSLRALKYVVLDEIHYLSDRMRGGVWEEVIIHLPASVKVVGLSATVSNVEDFADWIESVRGKTSLIVSENRPVPLLQEVMVQQSARKEPRLFDLYLDEGRKTINPALISFLDSMDKDALRRQRMDRNSRLFPSTSRRRGGTGRSGPGRHRSHQAEVSHYTPNRWALVDEMDFLGLLPAIYFIFSRNGCDRAVQQCMQAGLRLTTQDEAARICRIVDSMVYSQLDPDDARALGFASFRAALEQGIGAHHAGMITLYRQIVEHLFELGLLKVVFATETLALGINMPARSVVVEKLEKFNGISHEPLSPGEFTQLTGRAGRRGIDTVGYAVVADHRGFSPHTLVALASKRVYPLHSSFSPSFNMAVNLLNSADVETVRVTLDHSFAQWEAAESAQSLRTQIRATADKLNYYQQAFACDKGDFASFMRLRMELTQAERHDRKQLKHALFSSPKEKARAVKQLDQKIAALRHEERNHPCRFCPDLQAHLTWGQKWARLTAHMDRLQERYHSRTGSVSRKFDRICSILEVIGYVRKDPDRGYRVTAPGQLLRRIYSERDILVAQVLLSGITDRLNPEELACIASGFVYEPRSRADSSGLPRHFPGGSKGKIAQAVGHIMVAHTKIQALCEDYGLEPLPEPDFGMCQIIYDWVSDKPLTQVLDDTDMTGGDFVRNCKRTVDILTQISALSAYLPNPETAQTADKARALINKGIVSYSGIEDE*	common_virus_hmm	common_virus	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0020	persistent	indirect	.	.	.	GCA_938045375.1_00535
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	1000782	1001132	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	24181	24531	GCA_000163755_1_7_793	GCA_000163755_1_7_793	+	1273609	.	pfam13397	RNA polymerase-binding protein. RbpA is a family bacterial RNA polymerase-binding proteins. RbpA acts as a transcription factor by binding to the sigma subunit of RNA polymerase.	MAERSLRGMSIGAKSLESDDNVDFAARRDVTYVCPQGHKTILPLAADVDAPESWECRCGKIAHREDTEEQEESDDLAKPQRTHWDMLMERRTTQELAALLEKRLDMHKEGWIPDYE*	mmseqs_cdd	nonviral_gene	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0021	persistent	indirect	.	.	.	GCA_000148485.2_00986
GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote	cenote	CDS	1001385	1002065	GCA_000163755.1	GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755.1_GG770225.1	GCA_000163755.1|GG770225.1	GCA_000163755_1_7	GCA_000163755_1_7@C69	24784	25464	GCA_000163755_1_7_794	GCA_000163755_1_7_794	-	1273609	.	cd01105	Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.  A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	MAEPGGKTGPTKPQLSLHVKLKDRSDLSGKDAVQGELFALDGEEDFTKGYKGPAAAHVAGITYRQLDYWARKQIVVPSITQSHGSGSRRLYSFRDVVILAVSKRLLDAGVNLQNVNKAISFLMKHSSDQLERMTILCDGDQVLDCSDSTQIMDLMTKGQAVFGVSVTAIWHKVETDLQDQESVDLSHTKVKTGSSRVIDELAELRLRKKLDAQRAARQDVSRAESL*	mmseqs_cdd	nonviral_gene	C69	25464	976602	1002066	GCA_000163755.1|GG770225.1@region_976603_1002066@tool_cenote_CDS_0022	persistent	indirect	.	.	.	GCA_000413375.1_01696