core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	148	603	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	149	604	GCA_000176755_2_2_1	GCA_000176755_2_2_1	+	3274	.	PDB:4BIL_D	Large-Terminase	MLTVIACIPLLIEEKSIKFILMKNKEFLKSLSAIADQLRRTIEAEVVGFESTPAAIAERRAKVFDPLGGFEYFVYTYFLHYVHTEEKSQLHEFLFTRLPEILREPKGVPEATGAPRGEGKSTLVTQLFTLYCIVTAQKHYCVIVMDSIDQA*	hallmark_hmm	common_virus	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0001	cloud	direct	moderate	392	0.86	GCA_000176755.2_00007
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	640	1191	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	641	1192	GCA_000176755_2_2_2	GCA_000176755_2_2_2	+	3274	.	.	hypothetical protein	MQKLIQFPTLRRCKSCHQFGQKLPLPYTKVAVNGAVMECYPVVFAQVGAYLFGTEFAADKGVDVLNQLRIELIGLSLTLFGQPALPLGLFGAVLLPLCAVPSDFAADGAFVAVKLFGDFGDGAVAGQVLDVVSFVLGQLCVAHGNLSCRKGRMLLHTGLFLLWKVALQMRIRRRLKTGFQTTF*	.	hypothetical_protein	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0002	cloud	direct	moderate	430	0.779	GCA_000176755.2_00008
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	1304	1612	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	1305	1613	GCA_000176755_2_2_3	GCA_000176755_2_2_3	+	3274	.	PF12102.8	Domain of unknown function (DUF3578)	MANLHSYLKKVLKEYGSQRNEPFEDNKLAKFIRENAEVAIPKNLFPREEYKIHSSCGQGKRAEIPWIAVFYKDLSESAQKGYYIVYLFRANGTGVYLSLNQG*	hhsuite_tools	nonviral_gene	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0003	cloud	direct	high	308	0.997	GCA_000176755.2_00009
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	1678	2001	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	1679	2002	GCA_000176755_2_2_4	GCA_000176755_2_2_4	+	3274	.	PF12102.8	Domain of unknown function (DUF3578)	MVCPFEFLSNKNEYSFTIDPIDLKTKNKRGLPEGYELGNICSKFYSIDKFSSISNKELLKDLECLKMMFTELRGLMSPINFKDFNNNILENVLIEDLEIRIIKKVLV*	hhsuite_tools	nonviral_gene	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	2120	2488	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	2121	2489	GCA_000176755_2_2_5	GCA_000176755_2_2_5	+	3274	.	PF13020.6	Domain of unknown function (DUF3883)	MEAEKLVLNLEIEHAKGDPELQQNVDDIEHVALNEGDGLGYDIKSIYFDEVIKRVKPFYIEVKSTIGGINSPFYLSANEKRVAEEKGKEYSETFAKYPSPSFPPTAETQTQVFGCFRPKYPP*	hhsuite_tools	hypothetical_protein	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote	cenote	CDS	2530	3273	GCA_000176755.2	ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755.2_ADBF01000263.1	GCA_000176755.2|ADBF01000263.1	GCA_000176755_2_2	GCA_000176755_2_2	2531	3274	GCA_000176755_2_2_6	GCA_000176755_2_2_6	-	3274	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	LFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKIEKASSAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDARWTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGYDSKENRQHLKEHRLPDGIMRKAHRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLVKVSAQSHLKAMCLNLLKAANRLSVPVAA*	common_virus_hmm	common_virus	NaN	.	0	3274	GCA_000176755.2|ADBF01000263.1@region_1_3274@tool_cenote_CDS_0006	persistent	direct	moderate	651	0.875	GCA_000176755.2_00010
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	447	1202	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	448	1203	GCA_000176755_2_24_1	GCA_000176755_2_24_1	-	6809	.	PDB:2FJR_A	Repressor-protein-CI	MSSFKERLQFLWGDAKPAQIARDLNWSISGVLRIFEKDTIPKAETLVSIQKLKGCDWKWLMTGEGVPFPKGAATGSNQELQEPVAGYNAKWNAKSIQTAPEVRDTLGNPVDLSEFVFIPRYNVKVAAGHGYAVEDEKPKFTMAFRRYWIRVHLRTDPKSLSVVKVAGDSMEGILFDGDNVLVDHSRNQPGNGLYVLRIGEELIVKRTQTLPGNHLLVSSANEAYQPFELDLADETSGVEIIGKVVWFGRQI*	common_virus_hmm	common_virus	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0001	cloud	direct	high	755	0.999	GCA_000176755.2_00868
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	1437	1691	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	1438	1692	GCA_000176755_2_24_2	GCA_000176755_2_24_2	+	6809	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MQKNTADWHRADVVAALKKAGWSVRALSVANGLSPNTLKSALSMPYPKAERIIADALGMKPEDIWPQRYAARNFRPTLRKVVNA*	mmseqs_cdd	nonviral_gene	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	1753	1956	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	1754	1957	GCA_000176755_2_24_3	GCA_000176755_2_24_3	+	6809	.	.	hypothetical protein	MRITKRQAKATSLDHAIELAKRHAKERRLPSKVMADLMGVELKTYYRWLLENTLPLNRITHGGRARN*	.	hypothetical_protein	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0003	cloud	direct	high	203	0.995	GCA_000176755.2_00869
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	1953	2588	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	1954	2589	GCA_000176755_2_24_4	GCA_000176755_2_24_4	+	6809	.	PDB:1BCO_A	Mu-Transposase	MTPEQQRYKAKLPSWQQFMADVMQCIADYNNRPHSELPKNADGVHYTPLQYRDLRMQQENLAPDLLAEAELDVLFRPQEVRKAARGQIELFGNVYFSTDLAELHGEDVRVAYDYDDAEWVYVYKMDGSFVCKAKVDGNKRAAMPITVRDQLAEKRAKGRIKRAENTIRLAKEETRPAIEQQPDFGFAMHLLTVREDMAIDTQLNAPIMAAA*	common_virus_hmm	common_virus	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0004	cloud	direct	high	635	0.998	GCA_000176755.2_00870
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	2719	3003	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	2720	3004	GCA_000176755_2_24_5	GCA_000176755_2_24_5	+	6809	.	.	hypothetical protein	MLHSPLNSPELQKSAEQIQQLSQTYQQSSEQYAQAVNYNQQAAAQFLEASRLMGTAAGQLAAAARQPVPVTVSVSGGNITAAVSQAAERDNRRN*	.	hypothetical_protein	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0005	cloud	direct	high	284	0.996	GCA_000176755.2_00871
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	3007	4188	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	3008	4189	GCA_000176755_2_24_6	GCA_000176755_2_24_6	+	6809	.	COG4228	Mu-like prophage DNA circulation protein  [Mobilome: prophages, transposons]. 	MSWQDTLLDASYKGVAFEATGDTLRGVHALAEHSYPFVDGSDIEDTGCEALEFNLTAVLYGDDYEARLQRLLKVLREHGSGELVHPIYGSVPDTVVSDFEVRHSEDSPDYAEINISFKQSVAAAPFFGRELALALADEADWVADLAAFQGFAVLEKGLGKIRNLQQRWNNFHAAVLNVVGRLYGQVNGVFSGSLNLLNSPRVLLTELKGVFGALAGMHRTAGSSLSGWRDLAGGTKTAAAVPWQYRQGLDNGATPARSQAALPDVAALTAAIAIVGSTALAKELADIFAAEQDEPELTPAEISRLLADVRAQLNSALAANRLAVMMLSASAEQAEQLAVLLLSLYQDNPPDPEQLYRQLEQRRLLPQQPYLEGSAELADSVRTLAHTPTARRR*	mmseqs_cdd	nonviral_gene	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0006	cloud	direct	high	1181	0.999	GCA_000176755.2_00872
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	4214	4669	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	4215	4670	GCA_000176755_2_24_7	GCA_000176755_2_24_7	+	6809	.	PFAM:PF04865.13	Baseplate-J-like-protein	MDVPGVEAAFVYPLRRGLGTVDVAILTASGLPSPDVVRAVQQYIDERRPVTAKNVQVMAPQRVPLNVSVRVSLADGYTLPAVKEAAARVLSAYFATIKPGDTVYKSHIEAMISDTPGVRDRVLVSPAANQNATITPHIQWLALGTFEMTLL*	hallmark_hmm	common_virus	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0007	cloud	direct	high	455	0.998	GCA_000176755.2_00873
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	4666	5229	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	4667	5230	GCA_000176755_2_24_8	GCA_000176755_2_24_8	+	6809	.	PFAM:PF10076.8	baseplate-wedge-subunit	MTYADLLPLYYPPVSYDVRATHQATERQAEAAICDGVQAQSAQVLAAAYAPAAGGDITRWERLLGINPPQPDNYARRVADVLAKLNETGGLSIPYFIRLAAAAGYTITISEPQPFRAGVNRAGDRLASEDIMWVWWVDVAAQSQTVWRFRAGSGTAGSRLSQYSDAVIESLFNRLKPAHTAIRFTYR*	phrogs_hmm	nonviral_gene	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0008	cloud	direct	high	563	0.998	GCA_000176755.2_00874
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	5242	5730	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	5243	5731	GCA_000176755_2_24_9	GCA_000176755_2_24_9	+	6809	.	PFAM:PF07484.11	tail-fiber-protein	MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAGIRPDKSQPNQLLAALNKLAVVTTGNQDIGGSKTFTAAATFKAGAIVADSVGDFLRLMAMVRPPFVFFSSTRSELPAYLDLVAELHLPGCERFAGSQTLTVSSTINRNSSYDDHLIYKF*	phrogs_hmm	hypothetical_protein	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0009	cloud	direct	high	488	0.998	GCA_000176755.2_00875
GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote	cenote	CDS	6068	6772	GCA_000176755.2	ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755.2_ADBF01000225.1	GCA_000176755.2|ADBF01000225.1	GCA_000176755_2_24	GCA_000176755_2_24	6069	6773	GCA_000176755_2_24_10	GCA_000176755_2_24_10	-	6809	.	cd05271	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	MPLLEGCDAVANCVGIMSRRRDLLETVHHRTPAKLAVWAREAGVSRWLQLSALGADPAHPVAFVGSKGRGDEAVCENGPHTVLARPSVVYGRGGGSCEAFLKLARLPILPLPDGGRFDLQPVHAEDVADGLARLLNAPSAHGSVIHMTGRLKLTLADYLNLLRQTVHRKPSFQTASIPLPLLRPMLPLANLLSDGFLSPDSITLLQQGSCADTAAFAALLEREPLGAGEFYRLD*	mmseqs_cdd	nonviral_gene	NaN	.	0	6809	GCA_000176755.2|ADBF01000225.1@region_1_6809@tool_cenote_CDS_0010	persistent	direct	high	704	0.999	GCA_000176755.2_00876
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	55586	56320	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	1	735	GCA_000176755_2_49_54	GCA_000176755_2_49_54	-	134774	.	PFAM:PF05840.12	Rep-protein	MMKFDVQSLVDRESAERGREFGEWAAACGRNRERMQEIGETAAGAAYQISVGGCGRAEMWLYVDSDEKCVRVAGFETVADDLGHVGEFITLTCPSRFHAAAAASGERNPKYDGSTPRDASAYLQRVWARIRSALAKEDIKIYGFRVAEPHHDGCPHWHGLFFMPSEQRGRFREIVALHGCREDREELGFWIIFCRLRRRRRRRGRCAMRRSRAAGGRRSWKILPPLFRRKRSFGRTRRRHSLPR*	rep_hall_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0001	cloud	direct	high	734	0.999	GCA_000176755.2_01848
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	56317	56916	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	732	1331	GCA_000176755_2_49_55	GCA_000176755_2_49_55	-	134774	.	.	hypothetical protein	MLNQSDKNAIQGADWRCAPQPLRFYSREKIAGKMRAARAMYAIRRTLGEASRRVRPMMEAMEREARLARPAGAASVSDGLSALSGLDERQIREKLLSRSQIVALNNALAICKEMAELATQLNDNNTAFVMPLPVFHGEELGRFLAAADAVIERQRAIARRLKVSPETEDLSHVVELHEVKKSLMDLIGRQNARKKEGAK*	.	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0002	cloud	direct	high	599	0.998	GCA_000176755.2_01849
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	57000	57293	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	1415	1708	GCA_000176755_2_49_56	GCA_000176755_2_49_56	-	134774	.	PFAM:PF04216.11	transcriptional-regulator	MPVKNRNKNTAGRFRVAVHCPYCGSGCLTHGSQPQSPLTRLSRIACTNTDCGWTGVAVIETVKTVSPPSAKYWREGVLPVADKAYIEALPPRQDTQA*	phrogs_hmm	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0003	cloud	direct	high	293	0.997	GCA_000176755.2_01850
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	57283	57729	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	1698	2144	GCA_000176755_2_49_57	GCA_000176755_2_49_57	-	134774	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAKSVSGGHAAVAAVLGYTKPALENRLYEVKGQRIGIDEAMLIQRISGRTDFAEAVASESGGVFVALPEEANCAALAEEEISMRFLNVMEHGGEMVRKWRESTADGEVTEAELSALLAVFRRCVAEQAAVIELTRRYFCREDGDGDAG*	phrogs_hmm	nonviral_gene	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0004	cloud	direct	high	446	0.998	GCA_000176755.2_01851
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	57812	58108	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	2227	2523	GCA_000176755_2_49_58	GCA_000176755_2_49_58	+	134774	.	.	hypothetical protein	METHMHHPLQQEIADILNDENRLLDTLDHYHIQALLLESALVVLRQQPKGLEQLRGLLLIALERADTEHTRYMASEALIELEAHMAGVELIYPPNRSS*	.	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0005	cloud	direct	moderate	284	0.956	GCA_000176755.2_01852
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	58652	59347	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	3067	3762	GCA_000176755_2_49_59	GCA_000176755_2_49_59	+	134774	.	PDB:2FJR_A	Repressor-protein-CI	MNIVDRAKQAVQATSDADLARFLEISTPVVAGYRKRETVPLEQCIKIAERTGVSLDWLILGKGEMKGGSAAPERKKSVMEEVWAALEENRSPFPDVAFVPLFDAEVGAGNGIEVYGENIIQLIPFSQSWLAAEGLYIRDLACLPVNGDSMIPSLTSGDIVLVNHAKRNGDGVFVVRMGNALRVKRLQWLANGDLRISSDNPIYQTEQITPAELAGDFDILGACHTRISRVG*	common_virus_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0006	cloud	direct	high	695	0.999	GCA_000176755.2_01854
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	59410	59628	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	3825	4043	GCA_000176755_2_49_60	GCA_000176755_2_49_60	+	134774	.	.	hypothetical protein	MSYPKQINAAVSDLYFDPENPRFAALSFDKSDECAVIRHMNDEESLIDLLRSIADAGYFPANRFWYTERTAG*	.	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0007	cloud	direct	high	218	0.995	GCA_000176755.2_01855
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	59631	60548	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	4046	4963	GCA_000176755_2_49_61	GCA_000176755_2_49_61	+	134774	.	.	hypothetical protein	MAEGNRRLSALKVLNNPTLLDLPSVREIAEHPNHRPETVPCIEFARREDILVYLGYKHITGTKSWGSLEKAIYLDQLKNMLLADRPDLRGHHDTVHKTLARQIGSQSPTVAKTLAAYKIFERGKEQEAKTGRFFDIQGLGAQDIDFSLIYTALGYESIYAHLGLSSSSDVEQKDFDDTNGQELIRWLFKEDERGRRVVSDSRRLKELSRVLKSRAATEMLRETGDLELAFRLSDGYIAAFDKALDAASGQRKELERLLDEIKRSSSVQQPETMLVRRHADDLEDLGRKFRDLADDVERIIRNYTR*	.	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0008	cloud	direct	high	917	0.999	GCA_000176755.2_01856
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	60558	61565	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	4973	5980	GCA_000176755_2_49_62	GCA_000176755_2_49_62	+	134774	.	.	hypothetical protein	MPGVDALGWFKGEQFKSAKCFQYSPKLIGLFADHMELRAVCHTDKRYSTGEALNIIDDEDAVLNDGGTDGTQEEASSYPGRIAQSELVRMVRERLERRRDKWQAFWPFVLAVGDKGYCTLSFVANHPHARLYLYFLMALYGKYLHHPNAYRDGFETVCLALMQRIYPSNSGWTVRQTGAAMGSGAHANLSALATDLSLTPASLRRLVSSSGDGGIDLAAFHKSPSDDLGCLPFMAMQCACSSDIDELEKKANEGSYHHLNDILHLDIAHSHILLSPYDWFDIEQPNRFVAKNKGAVIFDRARILQNIVDLNVSVSLPAGISAELTAFMQTSEQFG*	.	hypothetical_protein	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0009	cloud	direct	high	1007	0.999	GCA_000176755.2_01857
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	61570	62511	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	5985	6926	GCA_000176755_2_49_63	GCA_000176755_2_49_63	-	134774	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MATAVSLFSGCGGSDTGVHRLGIDILMANDIIPYARDVYLANLPQTDYILKDVRKLESFPSADLLLGCYPCQGFSQGGLRRADNKLNFLYREFARALAQIKPKAFIVENVNGMLRANYDHLLKDQVSTFSDIGYRVRYQVLNAADYGVPQLRKRIFIVGIRNDIGAEYTFPAPTHGTEGKPPHITIGEALRGMPDWPEGEYYDRPFHWYYLSRNRRQDWNEPAKTVVSNARHTPLHPISPLMEKVGTDQWRFTEDRPARRFSYRECAVLQGFKKDLAFPETENATLMNKYKVIGNAVPPALFEAVAAELMPLL*	common_virus_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0010	cloud	direct	high	941	0.999	GCA_000176755.2_01858
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	62595	63095	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	7010	7510	GCA_000176755_2_49_64	GCA_000176755_2_49_64	-	134774	.	PFAM:PF05926.10	head-completion-protein	MPELVFPTAPTAKQPDKLRTVESGAFWPVIDLQQLREAVRIDNTVTPERLHFAAVEAAAYVNGQCAALEAQDGTLAATDSVTINGQSRAEWRYRRAVYCYTKAALLKHYADYDAAGKTADAESWLIVEVAHRLGDSGYTCSLKLEARLQEERAGEEKEDKGRNAQT*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0011	cloud	direct	high	500	0.998	GCA_000176755.2_01859
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	63203	63832	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	7618	8247	GCA_000176755_2_49_65	GCA_000176755_2_49_65	-	134774	.	PFAM:PF05944.11	small-terminase	MSYARAHFQSETAHAAAEADSLAELTAYQQLLVRLRADKAINGMEDKAAAKADLLPQYQAWVDGVLSGDTPAQGDKIIPTVLIWQLDCGQLDAALPLAQFAMDNNIETADEFQRDMAELVPEEYAEQIMRGHPASEATLDALTGWVTDKRDDGLHRYNINDNIRAKVLRAVAEQTEERDSTEALRLYRLAQQYNPKIGVKKRIAELEKT*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0012	cloud	direct	high	629	0.998	GCA_000176755.2_01860
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	63915	64964	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	8330	9379	GCA_000176755_2_49_66	GCA_000176755_2_49_66	-	134774	.	CDD:pfam05125	Major-Capsid-protein	MPKSAHLTAALAAAVDAIAQANQVNADDVRNGFAVQPAIAQKMYDEIALNSGLLGKISIVGKTEQVGELVGLSTGLIGSTAKTADPGVERKPRSIHNLTGRKYTLLQTNFDTALHYEEIDAWAYQAPDFAKRINAKIAESVALSLIAIGMNGKTRADNSDFAANPLLQDVAKGWLQKMREENPARVLGWQSGQVGVAKKEVKYGAAADAAYKNLDAVVTDVLNELIDERFADRTDFVVIASRRTVGDKYLRIINTAADKATELEAAGGLSKERTLGGLPVVYVPHMPQDTLLITPLKNLSIYYQTGAERRTLIDNPKKDQIESYLSKNIDFNIEEYGAAALVENLKAAD*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0013	cloud	direct	high	1049	0.999	GCA_000176755.2_01861
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	65004	65897	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	9419	10312	GCA_000176755_2_49_67	GCA_000176755_2_49_67	-	134774	.	PFAM:PF05929.10	capsid-scaffolding-protein	METFPKSDNAGADVSDNAQTTITDWRIIGVSGATADGRKISAEHLNQMAESYDRSIYGARINLEHIRFFLPDYAGYGDVLELKTAPWPADNDKTCLLARLSVLPALQELWDKGKKVYTSMEIDPEFADTGKAYLVGLAVTDDPASLGTTANYTAGRALADARKIRLSTYCESQAMTDKTQTEEKDQPVTINEERAEGMFAKLFDKYFGKDKTQPAPAPAAGQTQETDPQPQQDYTAQINALRGDNQQAAELFAKIIEAQNEQSQTLAALLSRLEALEAQPANPPRAEQTGEAGSVGW*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0014	cloud	direct	moderate	855	0.956	GCA_000176755.2_01862
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	66018	66842	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	10433	11257	GCA_000176755_2_49_68	GCA_000176755_2_49_68	+	134774	.	CDD:PHA02535	terminase-ATPase-subunit	MAADLVSGAPFAGNVDPRLQARVLFWQGWRISDIARLLGLKPTVVYSWKTRDGWEGGEPLQRVAASAEMRLHFLINQPKKSDADYKEIRQLTGLLSGGRSSERPSERKRQEESGRGFDDVPTIDRPPREPRERVRKVEKAQPNCFSPEQVARAQEIFREQLFGYQEVWLNQRVRFRNLLKSRQIGATFFFAREALVDALLTGKNKVFLSASRRQAFQFKQYQIDLAQMVGVELKGDSIRLHNGAVLYFLGTNSRTAQSYHGDLYVDEYFWIQDF*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0015	cloud	direct	high	824	0.999	GCA_000176755.2_01863
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	66808	67344	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	11223	11759	GCA_000176755_2_49_69	GCA_000176755_2_49_69	+	134774	.	CDD:PHA02535	terminase-ATPase-subunit	MWTSIFGFRIFEELTRVAKPMASQKQYRITYFSTPSSTAHPAYPFWTGSRFNEGRPKAEHVKFDVSHAALSGGRLCEDGQWRQIVTLDDAEKSGCTLFDRRQLELENSPAEFRQLFMCEFVEDGDGVFSWADLKRCQVDSWELLGGIFTSRSACVRRGICRCGWVMTRRFRGMRRVWW*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0016	cloud	direct	high	536	0.998	GCA_000176755.2_01864
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	67344	67820	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	11759	12235	GCA_000176755_2_49_70	GCA_000176755_2_49_70	+	134774	.	PDB:4IDH_A	Large-Terminase	MLPPRHNGDKFRILEHKLLRGDDFERQAEEVRSLLGRYNVQKVVVDRTGLGEAVFQLVGKFFPRVIGVNYSLAEKSLMVNKMLSLLRANRVEWDSDCKDITAAFLNIRTFTTAGGRVSYESARTEASSHSDVAWAAMQVFYQEPLDGVSQALGTVEIY*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0017	cloud	direct	high	476	0.998	GCA_000176755.2_01865
GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote	cenote	CDS	67834	68814	GCA_000176755.2	ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755.2_ADBF01000016.1	GCA_000176755.2|ADBF01000016.1	GCA_000176755_2_49	GCA_000176755_2_49@C2	12249	13229	GCA_000176755_2_49_71	GCA_000176755_2_49_71	+	134774	.	CDD:PHA02536	portal-vertex-protein	MVDAEVFSFEDRDGEFNVFDFLGCANNGLYYEPPVNLLDLERLLKRGVHHASALRAKINILKVTFVPTGYLSRSEFEKLAFNFLVTGNGYLELVRNRAGGVMRAENRLAVYMRRSSDLRDFVYLRNNWGSKFERLPGRDVVHIMEPDLRQEIYGVPYYLAALSSIELNSAATKFRVRYYRNGSHAGFILYATDDKIDEAGWALVKQELRKAKGGGNFNNLLLRAPNGNPEGVKLIPIAEVGAKDEFLNIKGVSAEDMMTAHRVPPALMGIVPKATSGLGDAITAAKVFARNEVAPLQQTFLDVNDRLGIEVFRFDKYVVERTDAAA*	hallmark_hmm	common_virus	C2	13229.0	55586	68815	GCA_000176755.2|ADBF01000016.1@region_55587_68815@tool_cenote_CDS_0018	cloud	direct	high	980	0.999	GCA_000176755.2_01866
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	75530	75922	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	1	393	GCA_000176755_2_52_88	GCA_000176755_2_52_88	+	97120	.	cd01108	Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators. Helix-turn-helix (HTH) transcription regulators CueR and ActP, copper efflux regulators. In Bacillus subtilis, copper induced CueR regulates the copZA operon, preventing copper toxicity. In Rhizobium leguminosarum, ActP controls copper homeostasis; it detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. These proteins are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain winged HTH motifs that mediate DNA binding, while the C-terminal domains have two conserved cysteines that define a monovalent copper ion binding site. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	MMNISQAAAESGLSAKQIRDYEKHGLIAPAARSEAGYRRYGQADLARLRFIRHAREVGFSLPQIGQLLSLQHNPQRTSREVKTLTARHIAELEAKIERLQGMVAELQRWHDACAGDDCPDCAILAGLEER*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0001	persistent	direct	high	392	0.997	GCA_000176755.2_02077
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	75972	76460	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	443	931	GCA_000176755_2_52_89	GCA_000176755_2_52_89	-	97120	.	.	hypothetical protein	MLFFRKHYLNRDFPLNCFQAADWPAWLASARWQPIDDIGHRGMSITIPQDNGEFAFDMPAAWVKNNTLPPLLLDILTQLNDIDNIMQQSCLRLAERHKRHSREYELYLFDPPDALYVTQGDVPYLDYTATRVNKSFRAYLKQSGGKWLPYYDEACTKPLAAD*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0002	shell	direct	high	488	0.998	GCA_000176755.2_02078
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	76584	77252	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	1055	1723	GCA_000176755_2_52_90	GCA_000176755_2_52_90	+	97120	.	COG3676	Transposase and inactivated derivatives  [Mobilome: prophages, transposons]. 	MLPSKYEDNTLQIKEKVQKELLRFFVLEVTARSAADILGIQPNSAILFYRKIRMVISHYLALVADEVLEGPVELDESCFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSDTLMPVIKQKIMPDSIVYTDSMSSYDKLDVSGFIDYRINHSKEFADRQNHINGIGNFWNQAKRALRKYNGIDRKSFLLFLKECEFRFNFGTPSRQLKILRDWCGI*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0003	persistent	direct	high	669	1.0	GCA_000176755.2_02079
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	77649	78059	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	2120	2530	GCA_000176755_2_52_91	GCA_000176755_2_52_91	+	97120	.	.	hypothetical protein	MTTYTIPRKDYQFLYIYEGTLLNYTLKNNEFHIIVKNVDYPDFPQELPTPSYSDWVKIKFKQFSYLKFIYGYATENQDKDIDNTLELGELKQDDEILDYGGALALIGRRYNLPTSFSIDIVCREIELEFLDQESFN*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0004	shell	direct	high	410	0.998	GCA_000176755.2_02080
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	78202	78579	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	2673	3050	GCA_000176755_2_52_92	GCA_000176755_2_52_92	-	97120	.	PDB:4U7B_B	Mos-transposase	MSRRADSEMVKEMLEKAVPRLTDKGTMLHSDQGVLYRTAGYRELLAKHSMVQSMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA*	common_virus_hmm	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0005	shell	direct	high	377	0.997	GCA_000176755.2_02081
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	79240	79956	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	3711	4427	GCA_000176755_2_52_93	GCA_000176755_2_52_93	+	97120	.	pfam04381	Putative exonuclease, RdgC. Members of the RdgC family may have exonuclease activity. RdgC is required for efficient pilin variation in Neisseria gonorrhoeae, suggesting that it may be involved in recombination reactions. In Escherichia coli, RdgC is required for growth in recombination-deficient exonuclease-depleted strains. Under these conditions, RdgC may act as an exonuclease to remove collapsed replication forks, in the absence of the normal repair mechanisms.	MAGGLEKEEKVLPAGVIRDILDDKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTRSSRSLAVFDTKHGYLLVNNASSTKAENMLTRLREALGGLEASLPNTKQSPASLMTSWLLNGACDGGFELDSDCELKGSGDVAPTVKISKQDLTADEVVQHVKNGKTVTQLGLVWREQLAFVLTQDFTLKRIQYLDVLQEEAESHGDDAASLAFASQILMAESLSTMVDELVAHLGGWQD*	mmseqs_cdd	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0006	persistent	direct	high	716	0.999	GCA_000176755.2_02083
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	79980	80348	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	4451	4819	GCA_000176755_2_52_94	GCA_000176755_2_52_94	+	97120	.	.	hypothetical protein	MHLDNDLKREIYLILADFLNAYRTEDIQTLNGKYDISGQFLEEIYEMLDFVEDKSNLRLFSMEEMDKEEGGGAKLQVFASNHTDSMVGIEACLYDGQEWIGLIKGIYEPDGFPKFTFHYFST*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0007	persistent	direct	high	369	1.0	GCA_000176755.2_02084
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	80390	81199	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	4861	5670	GCA_000176755_2_52_95	GCA_000176755_2_52_95	+	97120	.	COG1397	ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]. 	MLGAAIGDIAGSRFEFDNHSDTDFELFHPDSDFTDDTVCTTAVADWVLQGCGDDLASILHDWYAAYPSPKGAYGGRFLQWLQSDDPQPYDSWGNGSAMRVSAVGWAFGTLEETLYFAERSAAVTHNHPEGIKGAQAVAAAIFWARNGIGKAQIQENITRQFGYRLNQSCDQIRPHYGFNESCQETVPQAITAFLESSGFEHAVRLAVSLGGDSDTLAAIAGSIAEACYGIPAAMRERALAILPRRIAETLLAFESSIRPSENIRNKEPI*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0008	persistent	direct	high	809	0.999	GCA_000176755.2_02085
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	81196	81612	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	5667	6083	GCA_000176755_2_52_96	GCA_000176755_2_52_96	+	97120	.	COG4642	Uncharacterized conserved protein [Function unknown]. 	MKYSALLLLLGTFSAAVSAETLSPYNGKDCQYLGEVGKSGLPEGKGTWSCRNGNRYDGAFKDGKFDGQGKYSVGSQGNIFLEPFGVYSAYFKNMTVEGNFKNNRANGKHKVSENGQLIFTVTFDKGIMKNVKLVKTKK*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0009	persistent	direct	high	416	0.998	GCA_000176755.2_02086
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	81688	82254	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	6159	6725	GCA_000176755_2_52_97	GCA_000176755_2_52_97	+	97120	.	PDB:4XJC_B	dCTP-deaminase-dUTPase	MSIKSDKWIRRMSEEFGMIDPFEPNQIKEANGQRIISYGTSSYGYDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEVCETSYKDRNGKYMGQTGVTLPKT*	common_virus_hmm	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0010	persistent	direct	high	566	0.998	GCA_000176755.2_02087
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	82316	83092	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	6787	7563	GCA_000176755_2_52_98	GCA_000176755_2_52_98	+	97120	.	PRK02101	peroxide stress protein YaaA. 	MLFVLSPAKNLNEKDPAPIGRHTLPDLLFEAEQLMAELRQLAPHQLAELMHVSDKIALLNAERNAAWHTPFTPENAKQAVYMFNGDVYEGLSAETLDSDGIDYLQRHVRLLSGLYGLLRPLDLMQPYRLEMGTPFANRRGKNLYEYWGGTITELLNRTLKEHNAGTLINLASQEYFKVVRPEKLDAEIITPVFKDEKNGQYKIISFYAKRARGLMVRYAAERRITRAEELKQFDYEGYIYSEAASNEKEWIFLRDSRP*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0011	persistent	direct	high	776	0.999	GCA_000176755.2_02088
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	83032	83523	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	7503	7994	GCA_000176755_2_52_99	GCA_000176755_2_52_99	-	97120	.	.	hypothetical protein	MEKDKSDACLMMAETVGFEPTEDLHPQRISSPLHSASLPRFQQIKIILRLAEAVRFELTEGYQPSTVFKTVALNHSATLPFCTRFDRQKNFLRLAEAVRFELTEGYQPSTVFKTVALNRSATLPFLESAHHSVKRSFCQAFFFFYGRLSRKKIHSFSFEAASL*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0012	persistent	ambiguous	low	62	0.126	GCA_000176755.2_02088
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	83970	84425	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	8441	8896	GCA_000176755_2_52_100	GCA_000176755_2_52_100	-	97120	.	TIGR04401	twin-arginine translocation signal/Cys-rich four helix bundle protein. Members of this family average about 150 amino acids in length, beginning with a twin-arginine translocation signal sequence, then a His-rich spacer region, followed by a ~105-residue region in which thirteen positions are nearly invariant Cys residues. CDD (Conserved Domain Database) assigns members of this family to clan cl13994, the DUF326 superfamily, based on homology to PA2107 from Pseudomonas aeruginosa. PA2107 is a cysteine-rich four helical bundle protein, with solved structure PDB:3KAW.	MNRRQFIGGTAAISLAAATTLANAHGNHDHGSHSHAANSTDNAYEAARKAAGHCVSAGQVCLTHCITLLSKGDTSMKDCAAAVNQMLALCGAMQNLAAQNSRLAPSLAKVCIEACKQCAAACQKHAAHHAECKACYESCTDCIKECEKIAA*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0013	persistent	direct	high	455	0.998	GCA_000176755.2_02092
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	84719	86485	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	9190	10956	GCA_000176755_2_52_101	GCA_000176755_2_52_101	+	97120	.	COG1283	Na+/phosphate symporter [Inorganic ion transport and metabolism]. 	MVKLIRKYFLLAALLLALVASFIYSPSWLRLCYGLALFLFGMQNIEDGLREAAGGRLERWMRKSTATPTKGALFGMGATFILQSSTLVSLLTIAFLSTGMIQLAGGIAILLGTNLGATSGIWLLALAGQSLSLSPAALPMLVFGILMSFFSDRSRAFGRVLVGIALIFLGVDEIKAGFQAFGADIDFSGTQIGGMAEVLIFFVVGFLLTVVLQSSHATLLLTLAALAGGQISLMQGFAIAVGSNVGSSATTALVGMLGGDRNGQRLALAHVVFNTVTAVLSLIIWWPLTHLVMKFGQWLGMGQLLQLALFHTLFNLMGLAVFWKLQAKLADWLRRRLPDKTDTNLLLQDKAALEPRYLQSNMLLSPDTALMAVGKEIRHLDSIGIEVMCHALFIPTDRLYAEGDDEGKELPPPQPPLELDVPQLYESQIKPLFSAILDFTGKLDTAVEGLQERLAGDHAAAWQIVEIVKESQHLQKNMKQYLSDAASPAGKDYLRLRSHVFKTLRLFRRIDALAVGEERAGLMEKLRIHTETLETFRGRVMVKLRNHELNGWQTSSLLNDINYARRIGRGILEILTRREMNQVEDAPL*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0014	persistent	direct	high	1766	0.999	GCA_000176755.2_02093
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	86606	87169	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	11077	11640	GCA_000176755_2_52_102	GCA_000176755_2_52_102	+	97120	.	PDB:4U7B_B	Mos-transposase	MNMHKNTRLTPHHRQAIWTAYTQEKESVSSLARRYQVSRVTIYRSLKAARAKLLKPQTSTNNRFKQAKYGMKRLAKVERSIQEKLKKQAKRYNKSYPGEMVHVDTKRLPLLKGQKATDKRDYLFVAIDDFSRELYAAILPDKTADSAAKFLTEQVIEPCPYLIECVYSDNGSEYKGGASHAFGTACY*	common_virus_hmm	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0015	persistent	direct	high	563	0.998	GCA_000176755.2_02094
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	87248	87412	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	11719	11883	GCA_000176755_2_52_103	GCA_000176755_2_52_103	+	97120	.	NF033577	IS481 family transposase. null	MEMWHEKQSFDSPEHRQKELCRFVNFYNTVKPHSSLGGNTPFEVFLAYFSQPVV*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	87553	87699	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	12024	12170	GCA_000176755_2_52_104	GCA_000176755_2_52_104	+	97120	.	.	hypothetical protein	MPHTANGRHTPSTLKRDNTVQVRLLTKPSDGLTAVCRLKPSEINIRGL*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	87805	88290	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	12276	12761	GCA_000176755_2_52_105	GCA_000176755_2_52_105	-	97120	.	PFAM:PF05069.12	virion-morphogenesis-protein	MLEISLDDGDLQRGLGQLLRNARHPRPMMRAIAAELLSITEDNFESESWGGKKWPANARGGKILQKSGQLAASIHTASGSNFARIGTNKPYAAIHQFGGTVKAKNKPYLVFKVGDGFRRVKQVKIPARPYLPISKGGTLQAGAESRLLDVALDALARGVRK*	hallmark_hmm	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0018	cloud	direct	high	485	0.998	GCA_000176755.2_02095
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	88711	89055	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	13182	13526	GCA_000176755_2_52_106	GCA_000176755_2_52_106	-	97120	.	PDB:4IEE_A	Large-Terminase	MRDEFGAEVCEAVMLSENWYRTHTAPFKAALEDGTLTDLPRDEDILTDLRAFELVKGVPRIPDTRTKGADGKKRHGDAAIAFVLAHYASRELNTGPVRVASRKIRRRSPLTRGY*	hallmark_hmm	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0019	shell	direct	high	344	0.997	GCA_000176755.2_02096
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	89302	89472	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	13773	13943	GCA_000176755_2_52_107	GCA_000176755_2_52_107	+	97120	.	.	hypothetical protein	MLADGLDRFFRQAAFLGLLGHVFCSRLYFGFAERFRRQQEGMMARLEELNQRTTTF*	.	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	89508	89948	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	13979	14419	GCA_000176755_2_52_108	GCA_000176755_2_52_108	+	97120	.	COG0338	Site-specific DNA-adenine methylase [Replication, recombination and repair]. 	MSNKMEIIEHSNSNQTAMHSLMVMEQWGNGEAYNEDRWIERGRQAMRQTVEGMFELGRVLIVLKEHMTWEKFADVCEVFGMAEQLRHIKGRFLLSINDVPAIREIFTGFQFKEVSLRYSINKEATTEADELLIANYPINTEQAEPT*	mmseqs_cdd	common_virus	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0021	cloud	direct	high	440	0.998	GCA_000176755.2_02097
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	90148	90678	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	14619	15149	GCA_000176755_2_52_109	GCA_000176755_2_52_109	-	97120	.	PF07593.12	ASPIC and UnbV	MHGYADRWADVRGRCVFGFEANRVYLNKGSYFVDVAEQADWNKKGTSRGMILADFDNDGDLDSLVTHMTAAPSLYRNDSRPAGWVGVELVGNGQTCNRDALGSKVVLAAGDSPTGAAQHREVYANNGLAAQSDRRILFGLGGKGSGEVSLSVRWCGRGDAETFKLKPGQYHRIEQK*	hhsuite_tools	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0022	persistent	direct	high	530	0.998	GCA_000176755.2_02098
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	90690	92858	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	15161	17329	GCA_000176755_2_52_110	GCA_000176755_2_52_110	-	97120	.	PF03116.15	NQR2, RnfD, RnfE family	MIAFDRLPAKNDPRLPVLLLQATFVTCGITFWGFNRSPAQVGLILLICVTLDCLLHYLLRRKTLLVPISGLITGLGLSVLTNFSHGLWLAAIPPFFATASKYVFTVNGRHIYNPGLFGVIAALVLSDGMITPAPAYQWGGAGITAFFIATAALMLFALNIRRSVLISCFLLFYALQLSLRAWLLRHHIPPQTLFMGAFSSPAFYLFTFFMITDPPTSAESRKGQVFMAFFIVFVDLLLHKFQSFSTLFYSAFAYMTLRGLWLLWQNRSQYRNPLPALKQFAKALLLTGLIGGTGWGAYRLTHAFSADEVTFRFSEIPASQSGIGGTKGDIWERTDPRMRHVAKWLLSVGDAAAVADADNDGLPDVFLTQPLKSEQDRAQLFLNKGNFRFERFPLPQLDDHRKHPETHGLIASATWFDMDNDGDQDLLLGMGFGKGRLLRNDLKETGTLGFTEVGSGNAVDDYQISVATNVLDYDNDGRLDIIIGNVMQRYLPGYDRTVPYNIFKLPQPEYQGDRRMFNVMHRSWHDANNADENLLLRNLGGGRFAQIPNSENGFSGKRWTMAVATGDLNDDGFADLYIANDFGPDELYINEQGKRFLLVKGSFAGSVGRDTYKGMNATFGDLDDNGRPDIHVSNVHEKLQAEGSLLWMNYSKSGQTDAAMFKDEAARRNALNERRFGWGAAFGDLDRDGRLDIVQANGMADDAYDKKRPSAPIIGIGTPKSP*	hhsuite_tools	hypothetical_protein	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0023	persistent	direct	high	2168	1.0	GCA_000176755.2_02099
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	93087	94031	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	17558	18502	GCA_000176755_2_52_111	GCA_000176755_2_52_111	+	97120	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MIAKTMTKKAVSKQKILAGALIASVAVGGYFYYRQRQAAALPAFVAQSNGRLELNRIDVATLYPGRVKKVYVEEGADVKSGDILAELSSDTSSSRVEEARAAADRQRESVQRAKAAEEQTRRTVARAEANIEAARQQQRVAKMEWDNARNLLSEQLVSESETARRRADYERATAAVKAAEAARAEAQATVAQSRAAAAEARAGVGQAEAAVKSASSANDDMNIRAPIDGRVEYTIAEVGNVVASGSKVASLLDPADVSMNIFLPTDSISRLKVNDEARIKLDGIDAVFPAKSNSSPQKRNSRPKRWKPPTNAPS*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0024	persistent	direct	high	944	0.999	GCA_000176755.2_02100
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	94464	95609	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	18935	20080	GCA_000176755_2_52_112	GCA_000176755_2_52_112	+	97120	.	cd04735	Old yellow enzyme (OYE)-related FMN binding domain, group 4.  Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction.  Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	MNMLHKKGNKMNPVFQPYTFNNGATVPNRLTVAPMTHFASDKNGHITDQERTFLQNRFKGFGLFIAAATLVQANGKTFYGQPYAISEDDLPSLHEVAQIAQAQGAKAILQIHHGGLKAELSADIVAPSADEATGARELTVAEIEQLIAAYANAAALAVQAGFDGVEIHGANAYLLQQFVSAQTNRRTDEWGGSLHNRLRFPLAVVDAVAAAVKAHAKPDFILGYRFSPEESGETGITMADTFVLIDELVQKPLQYLHVSLWDFYKHARRGADTNRTRMELLHERIAGRLPLIGVGNLYTGSDIAKAFDTGWAEFIALGKTVMINPDLADLVRENRDADIQTALDPDRADHYRLPDPLWQRCLTNSPWLPLVKGMERKIVDI*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0025	persistent	direct	moderate	1115	0.973	GCA_000176755.2_02101
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	CDS	96247	97119	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	20718	21590	GCA_000176755_2_52_113	GCA_000176755_2_52_113	-	97120	.	COG0533	tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]. 	KDYADIDAVAFTQGPGLGGALLAGSSYANALAFALNKPVIPVHHLEGHLLSPLLAADKPAFPFVALLVSGGHTQFMAVRGIGDYVLLGESVDDAAGEAFDKTAKLLGLPYPGGAKLAELAERGHPEAFSFPRPMLHSNDLQMSFSGLKTAVLTAVEKVHAEHGGIGEQTRNDICRAFEDAVIDVLAAKAEKALRDTGFRTLVVAGGVGANKKLRERLSRLTIRPTQGKGRLKKPAEAVQTYFPPMEYCTDNGAMIAFAGAMRAEQAVAAGGFNVKPRWPLTDIVKSAEAV*	mmseqs_cdd	nonviral_gene	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_CDS_0026	persistent	direct	moderate	849	0.973	GCA_000176755.2_02102
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	tRNA	83153	83243	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	7624	7714	tRNA-Ser	tRNA-Ser	+	97120	.	tRNAscan-SE score: 70.3	Ser	NA	tRNAscan-SE	.	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	tRNA	83285	83375	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	7756	7846	tRNA-Ser	tRNA-Ser	+	97120	.	tRNAscan-SE score: 70.7	Ser	NA	tRNAscan-SE	.	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	tRNA	83400	83489	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	7871	7960	tRNA-Ser	tRNA-Ser	+	97120	.	tRNAscan-SE score: 74.8	Ser	NA	tRNAscan-SE	.	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote	cenote	tRNA	78858	78933	GCA_000176755.2	ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755.2_ADBF01000012.1	GCA_000176755.2|ADBF01000012.1	GCA_000176755_2_52	GCA_000176755_2_52@C5	3329	3404	tRNA-Glu	tRNA-Glu	-	97120	.	tRNAscan-SE score: 54.8	Glu	NA	tRNAscan-SE	.	C5	21591.0	75530	97121	GCA_000176755.2|ADBF01000012.1@region_75531_97121@tool_cenote_tRNA_0001	.	.	.	.	.	.