core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1792471	1793193	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	1	723	GCA_000185285_1_1_1536	GCA_000185285_1_1_1536	-	2362486	.	PFAM:PF06074.12	Portal	MPNRMAVCRDSAGRLYYEYQRTTDEPPNARYERVILPPSEVLHIPDLGFDRLVGDRPIAMAKNAIGMAQACEDYGASFFANGAAPGGVLEHPGVIKDPARVRESWTVTLPPTQTPQHPRYITVALSSVPLRSAMPLTGLIDKQMKPVPPPSGDTGSWMKPPAPLSVKTSPKTAVYGQQRCHRFQSEARKHQQRCQRLYPRDKKHQQRHHQFHPSARKPDKVSEDSTHRDGSTRSEGVECS*	hallmark_hmm	common_virus	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_000185285.1_01570
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1793307	1793588	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	837	1118	GCA_000185285_1_1_1537	GCA_000185285_1_1_1537	-	2362486	.	PFAM:PF06074.12	Portal	MGLNTWIRNHATHKATDQTLGSSYSFLFGPASSGRAVTERSAMQMTAVYSCVWILAEAIGGLPLHVYRVRADGGKEKALDHPLYRLLHDEPNP*	hallmark_hmm	common_virus	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_959028555.1_01716
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1793633	1794013	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	1163	1543	GCA_000185285_1_1_1538	GCA_000185285_1_1_1538	+	2362486	.	.	hypothetical protein	MSGSTEFEEVRVEIERDGKPVVVAFQGRRLSRVAYVREGRETVYRAYATPKDKIAVTKRSAVAWQASAHLNEETWADIANGNEWWQPTYALFVADTWEELRTQLDAEIVTKLQGKAEPVPVEHLDL*	.	hypothetical_protein	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_905371915.1_01956
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1794019	1795149	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	1549	2679	GCA_000185285_1_1_1539	GCA_000185285_1_1_1539	-	2362486	.	PDB:6Z6D_A	Large-Terminase	MLSAEAYSKHGFNVSGVIFDELHTQPNRALFDVMTKGSGDARTQPLYFLITTAGTDTHSVCFEQHQKAKDLLAGKEVDPTFYPVVYGADPEDDWLDENVWRKANPSLGVTVPIDKVRATAHSARINPAEENSFRQLRLNQWVKQSIRWTPMHIWNQNNQPVDLADLEGRVLRRPRPGEHHGHHGVRACVSTRREHGCVQGVPWFWIPEEGMTARVNRDRVPYDLWAKKGLIQVTDGNVVHYGAIEAAIEELGERFNIRQIAFDRWGATQMSQNLEDAGFTVVPFGQGFKDMSPPSKEFMKLALEGRLHHGGNEVLAWMVDNIHIRTDPAGNIKPDIAKSTETIDGVVATIMALDRANRNGGQHNESVYDSRGMLVL*	hallmark_hmm	common_virus	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0004	cloud	indirect	.	.	.	GCA_000392875.1_02557
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1795160	1796878	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	2690	4408	GCA_000185285_1_1_1540	GCA_000185285_1_1_1540	-	2362486	.	.	hypothetical protein	MQSIRVSVLRFFPGIPGFLGLPAAAGGCLLVGLRGPARVLRPVSGTAVNRASKGIAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ*	.	hypothetical_protein	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0005	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1797157	1797639	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	4687	5169	GCA_000185285_1_1_1541	GCA_000185285_1_1_1541	+	2362486	.	cd03425	The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	MPRPVVAAAILDSLSRPTKLLACSRAYPRELRGQFELPGGKVEAGEDAVAALTREIAEELGARLTMGRRICPEGGRWWPILGGRKMAVWLAEVAPGSPAPSAGRSHLEARWTALGELADLPWIGADLPVVEAVVASCRRAHNLTTQGSQVSEWAHAEDHW*	mmseqs_cdd	nonviral_gene	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0006	shell	indirect	.	.	.	GCA_001553345.1_00009
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1797620	1798258	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	5150	5788	GCA_000185285_1_1_1542	GCA_000185285_1_1_1542	+	2362486	.	COG1309	DNA-binding transcriptional regulator, AcrR family [Transcription]. 	MPKIIGESLASHRELTRARLFEALGSLLGEQSFESITLSEIAARAGVGRTAVYNHFADKEVLLLAYMRRVTEQFTRVLAERLEAEPDPLMSLRIYIRSHLQMISRYHVKTSMAVGRQMTRENASHLHDHAGVVGELLIGILDEAMERGLIAQQNTLGAVHLIHATLQGQRLPRDPARRESALALVETFILRGLGASEDSVRHVTSASLPSGE*	mmseqs_cdd	nonviral_gene	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0007	persistent	indirect	.	.	.	GCA_001281465.1_04651
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1798353	1798718	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	5883	6248	GCA_000185285_1_1_1543	GCA_000185285_1_1_1543	+	2362486	.	TIGR01068	thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport]	MATVTLTQDNFEQTVSGDGIVLVDFWATWCGPCRQFGPIFEEASEKYPDVVFGKIDTDDQQQLAMAAQITSIPTLMAFRDGVAVFRQSGALPLSALEDLISQIQGLDMDDVRKKIAESDQS*	mmseqs_cdd	common_virus	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000158015.1_01302
GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote	cenote	CDS	1798832	1799371	GCA_000185285.1	GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285.1_GL622194.1	GCA_000185285.1|GL622194.1	GCA_000185285_1_1	GCA_000185285_1_1@C138	6362	6901	GCA_000185285_1_1_1544	GCA_000185285_1_1_1544	-	2362486	.	COG1247	L-amino acid N-acyltransferase YncA [Amino acid transport and metabolism]. 	MLRRATPADADALSELARECFRQTFAHLYAAEDLAAFLDEAYAPSVLRSELKDPDRATWLLFAEEHEKSSTAAARPIGYVSARPARLPHPEVAAGDGEVQRLYVLREYQGGGRGTLLLETALAWLERHGPRTLWIGVWSENLGAQRLYERHGFAIVGEYSFMVGSHADREFIARRERGR*	mmseqs_cdd	nonviral_gene	C138	6901	1792471	1799372	GCA_000185285.1|GL622194.1@region_1792472_1799372@tool_cenote_CDS_0009	persistent	indirect	.	.	.	GCA_000308055.1_01511