core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	6505	6741	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	1	237	GCA_000212555_2_6_1	GCA_000212555_2_6_1	+	924825	.	NF038388	sigma(X)-activator ComW. The pneumococcal DNA-binding protein ComW, critical for natural transformation, interacts with the sigma factor that is a master regulator for competence, sigma(X).	MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRRDFIVYHYRVAYRLYLEKLVMNRGFISC*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0001	persistent	direct	high	236	0.996	GCA_000212555.2_01278
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	6930	8258	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	426	1754	GCA_000212555_2_6_2	GCA_000212555_2_6_2	+	924825	.	PRK01117	adenylosuccinate synthetase; Provisional	MYVRKEEPEGSDKIMTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVIDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0002	persistent	direct	high	1328	0.999	GCA_000212555.2_01279
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	8500	9648	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	1996	3144	GCA_000212555_2_6_3	GCA_000212555_2_6_3	-	924825	.	PDB:1XO0_A	Recombinase	MKYNKTKYPNIYYYETAKGKRYYVRRSFFFRGKKREKSKSGFTTLPQARAALVELEQQIQEQELGINTNLTLDQYWDIYSEKRLSTGRWNDTSYYLNDNLYKNHIKTKFGSIQLKNLDRNEYELFIAEKLQNHTRYTVQTLNSSFMALLNDAVKNGNLLSNRLKGVFIGQSDIPAANKKVTLKEFKTWIAKAEEIMPKQFYALTYLTIFGLRRGEVFGLRPMDITQNDSGRAILHLRDSRSNQTLKGKGGLKTKDSERYVCLDDIGTDLIYYLIAEASKIKRKLGIIKEQHKDYITINEKGGLINPNQLNRNFNLVNEATGLHVTPHMMRHFFTTQSIIAGVPLEQLSQALGHTKVYMTDRYNQVEDELAEATTDLFLSHIR*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0003	shell	direct	high	1148	0.999	GCA_000212555.2_01281
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	9820	10632	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	3316	4128	GCA_000212555_2_6_4	GCA_000212555_2_6_4	-	924825	.	4XZF_A	Helicase-like transcription factor/DNA	MQKTVEKILFRVAGVTKYKKAVKEACNMIAEDNGIPEYSKYYGDLSAKEIREEVEEYGLKVFKYRDLDIFNIELIPETDNKYDPNAIKVLIFDNHIGYVPATVSKSIRKYFDDERYHFLIECEIKGGPYKEWDDYEEKVVTNNDLDVGFEIYLTIVDSSQKEVIQSESSEIIDDNISNKEVTKTESIETKTTEAEHIEQNIVSDSVADIVNEINLSETSPKKKLPANKIIFSALYLFLVFFGVVGIPIAPFLAVPLTAWSLYKLYKLFRK*	hhsuite_tools	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0004	shell	direct	high	812	0.999	GCA_000212555.2_01282
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	10670	11053	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	4166	4549	GCA_000212555_2_6_5	GCA_000212555_2_6_5	-	924825	.	PDB:3DTE_A	IrrE-protein	MTEKEIISHFQVHIVDFDGELIPDELGFYEKETNTAFLSNKLSKKERVKVLLHELGHKDHTRSEYQNARLRCENEADRNMIHHLVKDALESLDDPKEFDYLKFMSYYNLKTVTNEVMVKEEYLALVN*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0005	shell	direct	high	383	0.997	GCA_000212555.2_01283
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	11066	11431	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	4562	4927	GCA_000212555_2_6_6	GCA_000212555_2_6_6	-	924825	.	PDB:1PRA_A	Repressor-protein	MFSTFEIVKDLCEKQGISLNTLEDKLKLGKNSLYGLKRNQPSAERLQQIADYFNVSTDYLLGRTDNPAIAGDSKEYTWQGKTLNVEEMASNVMMFGGRELTDEKKKIIQSIIEGYLKEAGD*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0006	shell	direct	high	365	0.997	GCA_000212555.2_01284
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	11732	11941	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	5228	5437	GCA_000212555_2_6_7	GCA_000212555_2_6_7	+	924825	.	PFAM:PF10078.8	transcriptional-regulator	MSQQHRKWNELVKERIEKRGWSQTDLAIVVGVSPSAITQLFKDGKGSDDLKLRINKKLRINESWEKFEE*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0007	cloud	direct	high	209	0.995	GCA_000212555.2_01285
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	11952	12116	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	5448	5612	GCA_000212555_2_6_8	GCA_000212555_2_6_8	+	924825	.	.	hypothetical protein	MREIILSAIVSSIISILMMTIQIKMIKKWLADFFDKQDEWLKTHFENLVKRLFL*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0008	cloud	direct	high	164	0.994	GCA_000212555.2_01286
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	12111	12896	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	5607	6392	GCA_000212555_2_6_9	GCA_000212555_2_6_9	-	924825	.	PF14337.6	Domain of unknown function (DUF4393)	MADLLPTILTAFATTMATKGAEAPANTFNEAWKYVFGSLDSFLLRKNEKRKYDNEKYIESLTEKIEQIPVENIQEPKMSILGPALEASKFYIEEEDIREIFASLLAASFDSSKSSLLHHSFVEIIKQLSPLDARNLKFIAQRKRCPVAKYLLEFETGGQSLLKPLIFIPHDGEIESSLDNSMFDFDRNASSITNLERLGLIKVDFTTWLSKKEKYTLLESNPLVTAYKTSYINTKNNENLHVEKGIIDITPLGEDFYNVCL*	hhsuite_tools	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0009	cloud	direct	high	785	0.999	GCA_000212555.2_01287
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	12948	13661	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	6444	7157	GCA_000212555_2_6_10	GCA_000212555_2_6_10	+	924825	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMKLNSFDEG*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0010	shell	direct	high	713	0.999	GCA_000212555.2_01288
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	13674	14063	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	7170	7559	GCA_000212555_2_6_11	GCA_000212555_2_6_11	+	924825	.	.	hypothetical protein	MDNVLLSLSEWIKSIIKEDKEIKMFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIRGYNHAYERGREAERQEIRKNIRRPFKGFTYDNEPPVGLRPEPLALPEPKQSAIRFL*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0011	shell	direct	high	389	0.997	GCA_000212555.2_01289
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	14079	14375	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	7575	7871	GCA_000212555_2_6_12	GCA_000212555_2_6_12	+	924825	.	.	hypothetical protein	MQELIEWLDNLIMIIKELEGRESTSRHFITIWENDYKNLLLVKEYLTDYEKLAKDYRYVTLKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0012	shell	direct	high	296	0.997	GCA_000212555.2_01290
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	14368	14880	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	7864	8376	GCA_000212555_2_6_13	GCA_000212555_2_6_13	+	924825	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRIRKE*	rep_hall_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0013	shell	direct	high	513	1.0	GCA_000212555.2_01291
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	15008	15196	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	8504	8692	GCA_000212555_2_6_14	GCA_000212555_2_6_14	+	924825	.	PFAM:PF07261.10	Replication-initiation-and-membrane-attachment	MDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0014	shell	direct	high	188	0.995	GCA_000212555.2_01292
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	15184	15342	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	8680	8838	GCA_000212555_2_6_15	GCA_000212555_2_6_15	+	924825	.	.	hypothetical protein	MGVLELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLVW*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0015	shell	direct	high	158	0.994	GCA_000212555.2_01293
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	15336	16106	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	8832	9602	GCA_000212555_2_6_16	GCA_000212555_2_6_16	+	924825	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYRRNTEQQEEFCEKHNIPLIKILRTESVVCRMCESERIHEENQERVNELANAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIANAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKQYF*	rep_hall_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0016	shell	direct	high	770	0.999	GCA_000212555.2_01294
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	16121	16315	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	9617	9811	GCA_000212555_2_6_17	GCA_000212555_2_6_17	+	924825	.	.	hypothetical protein	MFILKHGTREDKPFLRSAIISVTGLDISCSEEKKAMRFVSRAAALQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0017	shell	direct	high	194	0.995	GCA_000212555.2_01295
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	16315	16542	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	9811	10038	GCA_000212555_2_6_18	GCA_000212555_2_6_18	+	924825	.	.	hypothetical protein	MLELYFVYNGHCKFYLGTFDNVDDLIEQMEDHQWAFSAITHPRFQKHIGQRTTRFDYGSKDCYYLATFSGGEKND*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0018	shell	direct	high	227	0.996	GCA_000212555.2_01296
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	16535	16639	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	10031	10135	GCA_000212555_2_6_19	GCA_000212555_2_6_19	+	924825	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIELIKEFGMAILWLFLGYLVGERAARKEKKDDQ*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0019	shell	direct	high	104	0.99	GCA_000212555.2_01297
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	16669	16833	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	10165	10329	GCA_000212555_2_6_20	GCA_000212555_2_6_20	+	924825	.	.	hypothetical protein	MVGVTYQEIHLFVKFLKEQYGQGRPDYIEALNDLDGLMEVSYREAIERFLEDEL*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0020	shell	direct	high	164	0.994	GCA_000212555.2_01298
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	16823	17032	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	10319	10528	GCA_000212555_2_6_21	GCA_000212555_2_6_21	+	924825	.	.	hypothetical protein	MNYDKRTVIDGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRRKAEELEDDGRVKAKS*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0021	cloud	direct	high	209	0.995	GCA_000212555.2_01299
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	17007	17333	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	10503	10829	GCA_000212555_2_6_22	GCA_000212555_2_6_22	+	924825	.	.	hypothetical protein	MEELKQKVNAVYNWTVEDGKPQPPQQDLPQVVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWVGYSPSMSQLVIAVYLIYRGSEDET*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0022	shell	direct	high	326	0.997	GCA_000212555.2_01300
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	17323	17748	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	10819	11244	GCA_000212555_2_6_23	GCA_000212555_2_6_23	+	924825	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKLNELIKKYKKLEGVWNAEGAELARQIFLQDLEQLDKPKPVKVPQCVAEYIEFKKKNNFHVYGLAWLDGYEVEKEKRYFVKIKGNIKENMLVYGELLKRYFFTKSFSLDDVIYSHTRKELEDANFGWVFDCEGIEIEEVE*	mmseqs_cdd	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0023	cloud	direct	high	425	0.998	GCA_000212555.2_01301
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	17748	18035	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	11244	11531	GCA_000212555_2_6_24	GCA_000212555_2_6_24	+	924825	.	.	hypothetical protein	MTQTLEEGMKNQSKCIKVPREIRPFDIGYRIVNKYGQALALRNGASIFDLPFLAEKAIEKEFGKNDPEFDIGKHSVEEVAIVNLSKFHSCFEGVE*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0024	shell	direct	high	287	0.997	GCA_000212555.2_01302
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	18219	18557	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	11715	12053	GCA_000212555_2_6_25	GCA_000212555_2_6_25	+	924825	.	.	hypothetical protein	MSYDLEILVKIESGDYICIAEPKYSSPIYNLGRMFRVAMNWDFDQDTTYNIADVLDNIQRGISELERYPEKYVQYEPENRWRTVSVALEVLKSLKECILEQDIDTKYLYMRW*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0025	cloud	direct	high	338	0.997	GCA_000212555.2_01303
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	18559	18819	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	12055	12315	GCA_000212555_2_6_26	GCA_000212555_2_6_26	+	924825	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MRRFIAIWILVSAGLNIWHMDRIRDLEEKKPMVVYKADNAGAEIFGRVVEKGRHGKLYTVTIRDYGIFVVTKEQFEKIRVGDEVLL*	mmseqs_cdd	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0026	cloud	direct	high	260	0.996	GCA_000212555.2_01304
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	18819	19277	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	12315	12773	GCA_000212555_2_6_27	GCA_000212555_2_6_27	+	924825	.	.	hypothetical protein	MDDILQALAKMLNMTVDEVSSLLTTFKGNAPQIYEMFVKEKMFYDLFSLFQIMSIVIFSISAVVLAVLTLIYFTYDGGFVYSYDIRTGKTEEEIKLERIERKRKDLKIPLKISCISSSASLITLVIAIVLKATLAPNYIFIVNEILPKLTKR*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0027	cloud	direct	high	458	0.998	GCA_000212555.2_01305
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	19286	19405	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	12782	12901	GCA_000212555_2_6_28	GCA_000212555_2_6_28	+	924825	.	.	hypothetical protein	MNTIEKVKQWFIDRDLENGRVVGLMVLSSKRRIWHDTEI*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0028	cloud	direct	high	119	0.992	GCA_000212555.2_01306
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	19389	19739	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	12885	13235	GCA_000212555_2_6_29	GCA_000212555_2_6_29	+	924825	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MILKFRVWHHELGRLMSVKCMFFQDSEIEEFELNDTLMNDYITAYPDEIELMQSTGILDKNGKEVFEGDIVRFFDSLYTVFYDIKDRWVVDYMSNFSSEESIEIIGNIYENLVYIF*	mmseqs_cdd	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0029	cloud	direct	high	350	0.997	GCA_000212555.2_01307
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	19757	20158	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	13253	13654	GCA_000212555_2_6_30	GCA_000212555_2_6_30	+	924825	.	PFAM:PF05263.10	transcriptional-regulator	MKKLSDEELKTLDRELFKFQNIQRTIDLRRLELETRNPDAQSGPTVGISKPTETIAIRIADDPTLKFLEGFKGIINKLLSNLVDEDMEIFNLRWRYPQLRWEEIAEQKFMSKATIYRRRRIILEQYAILKGEL*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0030	shell	direct	high	401	0.998	GCA_000212555.2_01308
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	20298	20888	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	13794	14384	GCA_000212555_2_6_31	GCA_000212555_2_6_31	+	924825	.	CDD:cd01192	site-specific-tyrosine-recombinase	MSQQPAGFLFFRKEAVMEFVSPIKDNDDIQAMKDYLREWNEMYYMLFITGLNTGLRVGDILTLKVKDVQGWHIKLRERKTGKQITRRMTKELKKEMRRYVEGKPFHHFLFKSRQGQNKAITRERAYQIIHEAAEELGIDNVGTHTMRKTFGYKYYNKTKDVGTLQKMFNHSSPAITLRYIGIEQAELDDALRNFVI*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0031	shell	direct	high	590	0.998	GCA_000212555.2_01309
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	21265	21561	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	14761	15057	GCA_000212555_2_6_32	GCA_000212555_2_6_32	+	924825	.	PFAM:PF14239.5	HNH-endonuclease	MYNKPIRPSLKSKKWEKFRDRIMRKHDYLCQESLRYGISVQAEMVHHIFPVSEYPELEFVEWNCLPLTNKKHNTFHDRVNDRVINQGLYWQKKRKKNF*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0032	shell	direct	high	296	0.997	GCA_000212555.2_01310
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	21721	22113	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	15217	15609	GCA_000212555_2_6_33	GCA_000212555_2_6_33	+	924825	.	PFAM:PF05119.11	Small-Terminase	MAKPITAKSIKSKVVKQMKDLGTYRKEFEMIIDIFAGMLYQYQKLAQDYADMGYPVTDTYVNKAGAENERKVPILTAMEILRKDILSYSNQLMMNPKSLGEVVEQEGESVLTEVLKFKNEIKKKRVTGNG*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0033	shell	direct	high	392	0.997	GCA_000212555.2_01311
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	22106	22870	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	15602	16366	GCA_000212555_2_6_34	GCA_000212555_2_6_34	+	924825	.	PFAM:PF03354.14	Large-Terminase	MGNLDKAKEYAQHVLTQREEHCEENILAAERFFRDLENPAFEMDVDMVDFVIHFIENVIVHQQGDDMFAVSIRNKPLLLQPWQHFVVVNLFGFYYKGTNERRFKEALIMLARKNGKTSFTAAIALAYQILDTDSGSKCYIVANSVKQAMEAFGFLRFNVERWNDKNIRIKDNNQEHSITANFGDEGSFFIQALANDESRLDSLNGNVIILDEAHTMRNSKKHGLMKKQCQHTETVCFLLSQRLGIFLPGSLLTV*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0034	shell	direct	high	764	0.999	GCA_000212555.2_01312
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	22810	23835	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	16306	17331	GCA_000212555_2_6_35	GCA_000212555_2_6_35	+	924825	.	PFAM:PF03354.14	Large-Terminase	MLFVISTAGDIPTGFLANRLKYCQKVLKQLVTDDSFFIFICKANQSADGDVVNYLDENILKMANPSWGVTVSLKALKEEAEQAMNDPQTRNEFFNKTLNIFTNSMNAYFNPDEFIASDSCYDWSLEELARLPIRWYGGADLSRLHDLTAAALYGVYHDGEKDVDICITHAFFPRINAQKKANDDGIPLFGWQSDGWLTMSNTPTVLYDDIVKWFIKMREKGFKIAAVGMDRKFGREFLTKMKQARFKMIDQPQLFYLKSEGFRRIEFKVKNKEFYYFHSDAYEYCVSNVRAIEKVDDAVQYEKLDGDGGTARIDLFDASVFACIQALANLGKGGDVMRFFD*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0035	shell	direct	high	1025	0.999	GCA_000212555.2_01313
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	23843	24061	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	17339	17557	GCA_000212555_2_6_36	GCA_000212555_2_6_36	+	924825	.	.	hypothetical protein	MNEIVLSEHEINLLINKGRVKVILNEEVVTIRQRHMKDLMAETVKWEKQVIDVSQNIVRNKHFDSLFQNTFR*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0036	shell	direct	high	218	0.995	GCA_000212555.2_01314
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	24079	25281	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	17575	18777	GCA_000212555_2_6_37	GCA_000212555_2_6_37	+	924825	.	PFAM:PF04860.11	Portal-protein	MGIFEKFWKRNKPSKPINMLSHSDLGLSNLMDSYVPLARNPDVVTAVNKIADLVSNMTIHLMENTDKGDIRIKDGLARKIDINPCKHMTRKSWIFKIVRDLLLYGDGNSVLHVEYEPVTDYISNLRPFPMREVSFQTDKDSYVISFRGEKYSPDEVVHFVINPDPDILYIGTGFRVTLTDVVQSLNMATKTKKSFMNGKNIPSLIVKVDSSSAELDSEQGRERIAEKYLSTSRVGAPWIVPEALLDIQQVKPLSLTDIALNESVELDKRTVAGLLGVPAFILGVGEFNKTEYNNFVNTTVMSIATTITQTLTRDLLLSSNRYFKLNPRSLFSYNITELSAVAQQMANSAAMRRNEWRDWLGMAPDSEMEELIVLENFLPQEKLGDQNKLKGGEEENAKAK*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0037	shell	direct	high	1202	0.999	GCA_000212555.2_01315
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	25265	25840	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	18761	19336	GCA_000212555_2_6_38	GCA_000212555_2_6_38	+	924825	.	PFAM:PF04586.16	prohead-serine-protease	MQKRNSYRATQFQTREEESGDLVLSGYFIKFDEETELWRGYHEVIKRAGVEKAVTDADIRALFNHDDSLVLGRTGNGTLTLGVDDVGLFGDIIINKDDPQAVGAYARVKRGDVIGCSFGFIPVKIETEEREDGSYLDTVLELEIFEVSPCTFPAYPQTEIAARQKDFENQKRANREALDKRKKEIKEKFKL*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0038	shell	direct	high	575	0.998	GCA_000212555.2_01316
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	25837	27003	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	19333	20499	GCA_000212555_2_6_39	GCA_000212555_2_6_39	+	924825	.	PFAM:PF06673.10	Major-Capsid-protein	MNKALIFGARMRAKATKVVELEETIEELNKRSVVELEKLDRAKNDEEVLAVEKTVDGLQREIEEKEAEKVQLENEIDELDKQIKEQNRKAPTLGKMEERGGKTLGQREAFNHYLRTKEARADGFKSAEGEAIIPVELMTPKEAKQDKTDLTSLVNIVNVKNASGKWSVVKLTDQEMNTVEELEENPELAKPTFTKVNYEIQTRRGHLPVSQEFIDDADYDVMGLVAKQTKNQERITKNKEIAKVLKTATSKSAAGLDGLKDILNVELKTYYNATIVCTQSMFAALDKIKDKDGRYMLQTDITSPTGYKFAGRVIVVYPDDIIGESKGDLKAFIGDVGEFATLFDRAQTTVKWQDDKIYGQYLATANRFDVVKVDGDAGFYVTYTDAVL*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0039	shell	direct	high	1166	0.999	GCA_000212555.2_01317
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	27015	27284	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	20511	20780	GCA_000212555_2_6_40	GCA_000212555_2_6_40	+	924825	.	PFAM:PF08198.10	Arc-like-repressor	MVYKVIRPFKDLRDPKKHCYKVGDNYPRVKHKLDKEFAETLLNGANSAGSIFLMNVEDKDMSKDDTLTTEVEKEETKVVDGKPEEGDEE*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0040	shell	direct	high	269	0.996	GCA_000212555.2_01318
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	27287	27568	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	20783	21064	GCA_000212555_2_6_41	GCA_000212555_2_6_41	+	924825	.	CDD:cd08054	Head-Tail-Connector-Protein	MDNVQLLELLKLKLGIATKLRDKPLEKIIEAVKTELEDNLGVLLDLDSSEDQMFVVDFAAFRYEGGVDMPRHLQWRLHNLQIASKKEVKNVES*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0041	shell	direct	high	281	0.996	GCA_000212555.2_01319
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	27555	27854	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	21051	21350	GCA_000212555_2_6_42	GCA_000212555_2_6_42	+	924825	.	PFAM:PF10665.8	Minor-capsid-protein	MWNHEITLISKEVTGKDKLLQPISEDVEVTLLCRKKRVTRSEFYQANQVGLKPSLVVEIRNFEYENQELAKFEGKQYHILKTYPIDSEILELTLSEMLK*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0042	shell	direct	high	299	0.997	GCA_000212555.2_01320
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	27851	28210	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	21347	21706	GCA_000212555_2_6_43	GCA_000212555_2_6_43	+	924825	.	PFAM:PF04883.11	putative-tail-component	MSLTSDLANEIAKAMAEYSAEVEDKIDLIAEDVVNEAVTELKATSPKRHGKYARNWRFKKNAKGSYVIYNAAPTYRLTHLLENGHVLRNGGRSRAFPHIKPVEEKVKENFEKRIKEIGK*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0043	cloud	direct	high	359	0.997	GCA_000212555.2_01321
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	28207	28530	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	21703	22026	GCA_000212555_2_6_44	GCA_000212555_2_6_44	+	924825	.	PFAM:PF05657.10	tail-completion-protein	MKLSDFAAILEQANLPVTYRAFKTGNAPDLPYLVYYESIPAINAADNTVNHQIKSVTVELAFESKDEDLEERLKELWTTHELFFDVQEETFIEIERLYVKSYTVYLY*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0044	shell	direct	high	323	0.997	GCA_000212555.2_01322
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	28542	29120	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	22038	22616	GCA_000212555_2_6_45	GCA_000212555_2_6_45	+	924825	.	PFAM:PF04630.11	tail-tube-protein	MNQENKVTFGLKNVHVAPIKSIGADGVIAYDEIFRFPGAMELTLDPRGESIPIKADDIDYHFMNSNEGYEGKFKISHIIEMFATKILGEIKDAQTGVLTEKADAEFTSFALMFEFSGDKNKTRHVLYYCSASRPGNGSKTKNGTNVNERELGFKASPRPLDSVVKRSITSADNKEIYDNWFKKVYEPTAVAA*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0045	cloud	direct	high	578	0.998	GCA_000212555.2_01323
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	29132	29551	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	22628	23047	GCA_000212555_2_6_46	GCA_000212555_2_6_46	+	924825	.	PFAM:PF12363.7	Tail-assembly-chaperone	MRKIVWVGVQEYELGTNGYTPIAYKQQFGKDYFQDLFSMLKNQSFMNELNKLETDKELTATDIDISMLSDFDMTFFNRLFWTFAKSANPHIKPYEQFFMEMEVFPIQEVGPVLMEMLNASMTTKKHQMNQNQLAKKSSQ*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0046	shell	direct	high	419	0.998	GCA_000212555.2_01324
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	29828	32587	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	23324	26083	GCA_000212555_2_6_47	GCA_000212555_2_6_47	+	924825	.	UniProtKB:R4KJ43_9FIRM	Minor-tail-protein	MAGNIKGIKIEIDGDTQPLQKALKNVNKAATDASQELRQIDKALKFDTGNVTLLTQKQEVLQKQVSTTKEKLETLRQAQSQVEQQFKNGDIGADQYRAFQREVEVTQNVLKGYEGKLANVNQALNENGSATQNNKNQLKELQNEQSQLASEMVKVTSSFKLQESALGSNASEAERNALAQKKIGVQSEIVSKQISNLEQQLEITKKEFGENSTQANRMEAELNQAKTAFNHLNDEMKGTKSAADSTQESLSEISRNLRAELLQQFSEKLSAISEKLVEVGKEALEAAAQMQASNAQFTTVFGDMETQAREALNAIGQEMDIVPERLQGSFTQMASFAKTSGLDTAEALDLTSRATRAAADGAAFYDKSIESVTESLQSFLKGNFANDAALGISATETTRNAAANKLYGKSFKDLSEAQKQLTLLQMVEDGNKLSGALGQAARESDGLENVMGNLKQAGTNALSAIGQPLLEMMIPVFQTLATIVKGVAELFSSLPAPVKDFVVILGTVVTAVGVIAPIFLSLQALAEFLKISIGEMIIAALPIIGTAIAIAAAVAAIIVIVKYLWETNEGFRDAVTTVWNAILEVINAVVSEISNFVMSIFGTVVAWWTENQELIRASAETVWNAIYTVISTILDILGPLLQAGWDNIQLIITTTWEIIKIVVETAINVVLGVIQAVMQIITGDWSGAWETIKGVFSTVWQAIQSIVQTIFSAIQSYISNVLNGISGTVSNIWNGIKDTVSNVLNAISSTVSSVWEGIKSTISGAINGAKDAVSSAIEAIKGLFNFSISWPHIPLPHFYVSGSANPLDWLSQGVPSIGIEWYAKGGIMTKPTIFGMNGNSLMVGGEAGNEAVLPLNDKTLGAIGRGIAQTMGGTSPTINITITGNTVREEADIIRIADEVAQRIADELQRKTQLRGGFA*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0047	shell	direct	high	2759	1.0	GCA_000212555.2_01325
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	32584	33306	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	26080	26802	GCA_000212555_2_6_48	GCA_000212555_2_6_48	+	924825	.	PDB:2X8K_A	Distal-Tail-Protein	MIKHNELVIDGVRTSSFPFKIIVHDSPSIALGESKTALLEHGGISGAIVQTNKHRELVKKTYTIYLVKPTEEQMNQFMSLFIREKFWLESERVKTTRLWCYKVNVSDLEEVQPGLYMTKATFTCHPTKYFKGSDTQRLTRSGTLTVQGSALAFPKITIVGQSASETSFTIAGQVIRLERLTESLVMVNNPDNPSFKTTTGKPVKWSGDFITVDPAKVKNIGVVLGPGIQSLEIETVWGWA*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0048	shell	direct	high	722	0.999	GCA_000212555.2_01326
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	33397	39171	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	26893	32667	GCA_000212555_2_6_49	GCA_000212555_2_6_49	+	924825	.	PDB:3GUD_A	Neck-appendage-protein	MNGDFTLTVKYPISDSGIYQLIQEDMLIKAPTPVLGAHLFRIKKPVEYNDHLEITAYHISDDVMQRSITPVSVTSQSCGMTLSRMVQNTKTALGDFSFNSDIQDRRTFNTTETETLYSILLDGKHSIVGTWGGELVRDNFAMTVKKSRGENRGVVITTHKNLKNYQRTKNSQNVVTRIHAKSTFKPEGAEKETTIRVTVDSPLINSYPYINEKEYENNNAKTVEELQKWAQSKFSNEGIDKVSDAIKIQAYELDGQVVHMGDTVNLKSWKHNVDAFKKAIAYEFDALKEEYISLTFDDKAGIGGSRASGGLSSAADAILGVTESAQEIALEKALQNADLDFDHKAGLLRQEISDDIELAKARAEEVKRELSDTINQRFNSFDNGPLKETKRKAEEALRNAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELDGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGYNALKIIGLNPSGRDGGNPKVTYPVLGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRVNSLEAGVNRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDGENELLVAKTEFKRTADGLSTKMAAVESYVGQDGQRQEALQRYTREESARQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGADNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLVRKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKVAKGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRPGLHFYHDSQDVANFFGIQQSFAFEGVRGEKVSVSLLVSKDGSDSYSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDTDEAIRSVQSQLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTAEKLKVDNALIRKLTANDAFIDQLTSKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA*	hallmark_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0049	shell	direct	high	5775	1.0	GCA_000212555.2_01327
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	39266	39469	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	32762	32965	GCA_000212555_2_6_50	GCA_000212555_2_6_50	+	924825	.	.	hypothetical protein	MNTEQLNQALRMTISEMSTTSTNSMITSNILSIQLNEQREENQRLQARVDELEALLDEQTKPADKGE*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0050	shell	direct	high	203	0.995	GCA_000212555.2_01328
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	39472	39822	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	32968	33318	GCA_000212555_2_6_51	GCA_000212555_2_6_51	+	924825	.	.	hypothetical protein	MAETIQNTDNLLDLTKITEPFDLASALRYMKENGEFIRCKNVSDDFYMYRDVQKRPVIVNGRRQFKDVETVWAFNQWGGTIATINVAVLLNHEFYIMKFDAEGNPDWTDPTVKPKE*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0051	shell	direct	high	350	0.997	GCA_000212555.2_01329
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	39832	40248	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	33328	33744	GCA_000212555_2_6_52	GCA_000212555_2_6_52	+	924825	.	PFAM:PF05105.11	Bacteriophage-holin	MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLLRKISGVLLLMILIPASVLLPEKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0052	shell	direct	high	416	0.998	GCA_000212555.2_01330
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	40252	40584	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	33748	34080	GCA_000212555_2_6_53	GCA_000212555_2_6_53	+	924825	.	PFAM:PF09682.9	Phage-holin	MQQITEIITNGAISILVVLAGVVVRAVKDYLVQKGGEKTIKIVEILAKNAVNAVEQVAAETGYKGDEKLAQARAKVRAELTKYNISMTDKDLDTFVESAVKQMNDAWKGR*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0053	shell	direct	high	332	0.997	GCA_000212555.2_01331
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	40588	41544	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	34084	35040	GCA_000212555_2_6_54	GCA_000212555_2_6_54	+	924825	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDRNRLRTGLPQVGVQPYRQVHAHSTGNRNSTVQNEADYHWRKDPELGFFSHVVGNGRIMQVGPVDNGAWDVGGGWNAETYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTGSLAGIKTHEYCTNNQPNNHSDHVDPYPYLAKWGISREQFKQDIENGLSAATGWQKNGTGYWYVHSDGSYPKDKFEKINGTWYYFDGSGYMLSDRWKKHTDGNWYYFDQSGEMATGWKKIADKWYYFDVEGAMKTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYLKPDGTLADKPEFTVEPDGLITVK*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0054	persistent	direct	high	956	0.999	GCA_000212555.2_01332
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	41682	41861	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	35178	35357	GCA_000212555_2_6_55	GCA_000212555_2_6_55	-	924825	.	PFAM:PF04936.11	transcriptional-regulator	MREVIQELLDSSMSTSAISQGAGVPWTTVSDLRKGKTSMDKMALLTAEKLYEFATTDKQ*	phrogs_hmm	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0055	shell	direct	high	179	0.994	GCA_000212555.2_01333
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	42003	42158	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	35499	35654	GCA_000212555_2_6_56	GCA_000212555_2_6_56	-	924825	.	.	hypothetical protein	MKLNKEDWLRLLEKAIDNIPETVTAIASLVTAITVARQNKKRKPKSRQRKR*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0056	.	unmatched_CDS	none	0	0	.
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	42431	42898	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	35927	36394	GCA_000212555_2_6_57	GCA_000212555_2_6_57	+	924825	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MYYTLEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILTDERLNHRVEVEIGILEDECAAIMQDFFRNRRKK*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0057	persistent	direct	high	467	0.998	GCA_000212555.2_01334
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	43084	43527	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	36580	37023	GCA_000212555_2_6_58	GCA_000212555_2_6_58	+	924825	.	PRK13956	dUTP diphosphatase. 	MKIRGFELVSSFTDENLLPKRETAHAAGYDLKVAVRTVVAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFATFLIADGDAAGGVRTGGFGSTGH*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0058	persistent	direct	high	443	0.998	GCA_000212555.2_01336
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	43487	44044	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	36983	37540	GCA_000212555_2_6_59	GCA_000212555_2_6_59	+	924825	.	2AXN_A	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type	MAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCATGLPLRVEPLLHEWQVYKTGIENFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYREHQTVVVVAHRMLMRQFVPNEKIDFCQVIECELEI*	hhsuite_tools	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0059	persistent	direct	high	557	0.998	GCA_000212555.2_01337
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	44157	45419	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	37653	38915	GCA_000212555_2_6_60	GCA_000212555_2_6_60	+	924825	.	PDB:3BH0_A	Helicase-ATPase	MEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLQQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPKNSLTGITLPKEIQVIGVTTIQEVLKKVFA*	rep_hall_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0060	persistent	direct	high	1262	0.999	GCA_000212555.2_01338
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	45492	45989	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	38988	39485	GCA_000212555_2_6_61	GCA_000212555_2_6_61	+	924825	.	cd03379	Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity.  Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	MSYFEQFMQANQAYVALHGQLNLPLKPKTRVAIVTCMDSRLHVAQALGLALGDAHILRNAGGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFENEPFQEYLKEELGVDVSDQDFLPFQDIEESVREDMQLLIESPLIPDDVIISGAIYNVDTGSMTVVEL*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0061	persistent	direct	high	497	0.998	GCA_000212555.2_01339
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	46205	46828	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	39701	40324	GCA_000212555_2_6_62	GCA_000212555_2_6_62	+	924825	.	COG2339	Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Signal transduction mechanisms]. 	MPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSTFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKSLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIFLGLALGTHFLFNSPFVELETELPLAIPVVTAIALYGFYHAYCFVEKHNELMT*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0062	persistent	direct	moderate	584	0.936	GCA_000212555.2_01340
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	46973	47941	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	40469	41437	GCA_000212555_2_6_63	GCA_000212555_2_6_63	+	924825	.	PRK02269	ribose-phosphate diphosphokinase. 	MSFSDLKLFALSSNKELAERVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGKHVFILQSTSSPVNDNLLEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLEVAGVDRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGSDYVVVSPDHGGVTRARKLAEFLKTSIAIIDKRRSVDKMNTSEVMNIIGKVEGKTCILIDDMIDTAGTICHAADALAEAGAVEVYASCTHPVLSGPATDNIQKSAIKKLVVLDTIYLPEERLIDKIEQISIAHLLGDAIVRIHEKRPLSPLFDIEKKI*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0063	persistent	direct	high	968	0.999	GCA_000212555.2_01341
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	47877	48356	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	41373	41852	GCA_000212555_2_6_64	GCA_000212555_2_6_64	-	924825	.	PFAM:PF01610.16	Transposase	MEQLHFITKLLDIKDPNVQILNIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGIPTRILLRKRRFKCYHCSKMMVAETSDDVQSYFFSFYYITVLNLALLDSPLLSIYSEKRRKNLRIISGLVIKFFSQYRKVEKVVVFHEYVR*	common_virus_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0064	shell	direct	high	479	0.998	GCA_000212555.2_01342
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	48482	48715	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	41978	42211	GCA_000212555_2_6_65	GCA_000212555_2_6_65	-	924825	.	.	hypothetical protein	MFSQLHMREEQVLLAQDYALETARAEGLEQGLERGKVEGRAERKLFAFLDIVRQGLLTSEVASQQLGMSVSEFEALL*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0065	shell	direct	high	233	0.996	GCA_000212555.2_01344
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	49039	49296	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	42535	42792	GCA_000212555_2_6_66	GCA_000212555_2_6_66	-	924825	.	.	hypothetical protein	MLDLPAKNVTILEGSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVIIEIQVHHQNFFINHLWAYLCSQVNQNLEKIRQREGDTH*	.	hypothetical_protein	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0066	shell	direct	high	257	0.996	GCA_000212555.2_01345
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	49609	52278	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	43105	45774	GCA_000212555_2_6_67	GCA_000212555_2_6_67	+	924825	.	CDD:cd08642	DNA-Polymerase-I	MVFFDSFLYNGCMDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVSESLDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFAWSCGDKLYATDKLELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLLSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYDMEQPLAFVLAKMEIAGIMVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLGLPLEYTKKTKTGYSTAVDVLERLAPIALIVKKILDYRQIAKIQSTYVIGLQDWILADGKIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDDVTANDRRNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKSELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK*	rep_hall_hmm	common_virus	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0067	persistent	direct	high	2669	1.0	GCA_000212555.2_01346
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	52363	52800	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	45859	46296	GCA_000212555_2_6_68	GCA_000212555_2_6_68	+	924825	.	COG1832	Predicted CoA-binding protein [General function prediction only]. 	MSQEFINPSDGVIRQYLATSKTLAVVGLSDREETTSNRVTKEMQARGYKIIPVNPKAAGGEILGEKAYASLAEIPFPVDIVNVYRRSEFLPDVARDFLKADAKIFWAQLGLESLEAKEILRDGGCDDIVMNRCIKREHTRLIEEA*	mmseqs_cdd	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0068	persistent	direct	high	437	0.998	GCA_000212555.2_01347
GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote	cenote	CDS	52983	53993	GCA_000212555.2	AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555.2_AFGT01000001.1	GCA_000212555.2|AFGT01000001.1	GCA_000212555_2_6	GCA_000212555_2_6@C1	46479	47489	GCA_000212555_2_6_69	GCA_000212555_2_6_69	-	924825	.	PF03601.14	Conserved hypothetical protein 698	MSFLSKNGAGILACLLISIVSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIDAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKELSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF*	hhsuite_tools	nonviral_gene	C1	47489	6505	53994	GCA_000212555.2|AFGT01000001.1@region_6506_53994@tool_cenote_CDS_0069	persistent	direct	high	1010	0.999	GCA_000212555.2_01348