core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	14253	14732	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	1	480	GCA_000221985_1_1_14	GCA_000221985_1_1_14	+	2190731	.	.	hypothetical protein	MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMICLYELISKEEGLVEDISRLRKYFKTKFRNRILDYIRKQESYKRRYNKEPYEEVGEISHRISEGGLWIDDYYLFYETLRDYRNKQSKEKQEELERILRNERFRGRQRVLRDLRIVFKEFDIRSR*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0001	persistent	direct	high	479	0.998	GCA_000221985.1_00014
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	15154	15318	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	902	1066	GCA_000221985_1_1_15	GCA_000221985_1_1_15	+	2190731	.	.	hypothetical protein	MMSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVID*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0002	shell	direct	moderate	161	0.976	GCA_000221985.1_00015
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	15315	15575	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	1063	1323	GCA_000221985_1_1_16	GCA_000221985_1_1_16	+	2190731	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIRDLEEKKPLVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0003	persistent	direct	high	260	0.996	GCA_000221985.1_00016
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	15572	16063	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	1320	1811	GCA_000221985_1_1_17	GCA_000221985_1_1_17	+	2190731	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0004	shell	direct	high	491	0.998	GCA_000221985.1_00017
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	16060	16482	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	1808	2230	GCA_000221985_1_1_18	GCA_000221985_1_1_18	+	2190731	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0005	shell	direct	high	422	0.998	GCA_000221985.1_00018
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	16479	16715	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	2227	2463	GCA_000221985_1_1_19	GCA_000221985_1_1_19	+	2190731	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGSLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0006	shell	direct	high	236	0.996	GCA_000221985.1_00019
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	16736	17089	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	2484	2837	GCA_000221985_1_1_20	GCA_000221985_1_1_20	-	2190731	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0007	shell	direct	high	353	0.997	GCA_000221985.1_00020
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	17073	17288	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	2821	3036	GCA_000221985_1_1_21	GCA_000221985_1_1_21	-	2190731	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0008	shell	direct	high	215	0.995	GCA_000221985.1_00021
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	17418	17864	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	3166	3612	GCA_000221985_1_1_22	GCA_000221985_1_1_22	+	2190731	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0009	shell	direct	high	446	0.998	GCA_000221985.1_00022
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	18446	18940	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	4194	4688	GCA_000221985_1_1_23	GCA_000221985_1_1_23	+	2190731	.	PFAM:PF03592.15	Terminase-small-subunit	MDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASIKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMMNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDNEQDDKLIDFAKALRGAFDDK*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0010	shell	direct	high	494	0.998	GCA_000221985.1_00024
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	18930	20144	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	4678	5892	GCA_000221985_1_1_24	GCA_000221985_1_1_24	+	2190731	.	PDB:5OEA_B	Large-Terminase	MTNKFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVLNNMVFMNEIARVRETADRLNIDEPMYILAGTSSTSIQNNIIQELYNMFDIEPKYDKHGAFTLCGVKVVQVYTGSISGLKRARGFTAFGAYVNEASLANEQVFKEIISRCSGEGARIVWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKNATPAGVFYDRDILGLWVTGEGVVYRDFSENMVVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0011	shell	direct	high	1214	0.999	GCA_000221985.1_00025
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	20156	21175	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	5904	6923	GCA_000221985_1_1_25	GCA_000221985_1_1_25	+	2190731	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITMHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0012	shell	direct	high	1019	0.999	GCA_000221985.1_00026
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	21304	21837	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	7052	7585	GCA_000221985_1_1_26	GCA_000221985_1_1_26	+	2190731	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0013	shell	direct	high	533	0.998	GCA_000221985.1_00027
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	22067	22414	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	7815	8162	GCA_000221985_1_1_27	GCA_000221985_1_1_27	+	2190731	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKEHGRHADVQQRQHETRRRGRG*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0014	shell	direct	high	347	0.997	GCA_000221985.1_00028
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	22411	23961	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	8159	9709	GCA_000221985_1_1_28	GCA_000221985_1_1_28	+	2190731	.	PFAM:PF06152.10	minor-capsid-protein	MKNQEYWAKRKANLIYQQMDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFNVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSRICQEHDNQVYDRDKAVPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0015	shell	direct	high	1550	0.999	GCA_000221985.1_00029
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	24251	24820	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	9999	10568	GCA_000221985_1_1_29	GCA_000221985_1_1_29	+	2190731	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0016	shell	direct	high	569	0.998	GCA_000221985.1_00031
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	24826	25668	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	10574	11416	GCA_000221985_1_1_30	GCA_000221985_1_1_30	+	2190731	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0017	shell	direct	high	842	0.999	GCA_000221985.1_00032
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	25680	25862	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	11428	11610	GCA_000221985_1_1_31	GCA_000221985_1_1_31	+	2190731	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0018	shell	direct	high	182	0.995	GCA_000221985.1_00033
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	25852	26040	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	11600	11788	GCA_000221985_1_1_32	GCA_000221985_1_1_32	+	2190731	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0019	shell	direct	high	188	0.995	GCA_000221985.1_00034
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	26042	26353	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	11790	12101	GCA_000221985_1_1_33	GCA_000221985_1_1_33	+	2190731	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0020	shell	direct	high	311	0.997	GCA_000221985.1_00035
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	26334	26672	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	12082	12420	GCA_000221985_1_1_34	GCA_000221985_1_1_34	+	2190731	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0021	shell	direct	high	338	0.997	GCA_000221985.1_00036
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	26647	27162	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	12395	12910	GCA_000221985_1_1_35	GCA_000221985_1_1_35	+	2190731	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0022	shell	direct	high	515	0.998	GCA_000221985.1_00037
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	27159	27527	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	12907	13275	GCA_000221985_1_1_36	GCA_000221985_1_1_36	+	2190731	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0023	shell	direct	high	368	0.997	GCA_000221985.1_00038
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	27530	27943	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	13278	13691	GCA_000221985_1_1_37	GCA_000221985_1_1_37	+	2190731	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0024	shell	direct	high	413	0.998	GCA_000221985.1_00039
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	27948	28328	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	13696	14076	GCA_000221985_1_1_38	GCA_000221985_1_1_38	+	2190731	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0025	shell	direct	high	380	0.997	GCA_000221985.1_00040
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	28367	28717	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	14115	14465	GCA_000221985_1_1_39	GCA_000221985_1_1_39	+	2190731	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLFLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMREFAERHNRKRKEEMNGNS*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0026	shell	direct	high	350	0.997	GCA_000221985.1_00041
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	28704	29267	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	14452	15015	GCA_000221985_1_1_40	GCA_000221985_1_1_40	+	2190731	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0027	shell	direct	high	563	0.998	GCA_000221985.1_00042
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	29575	32616	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	15323	18364	GCA_000221985_1_1_41	GCA_000221985_1_1_41	+	2190731	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRTLVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSMLQSLLDIVAPIFETIESVVDKFGDGLSRVYDEHVAPAIDSIANAFNGLIDIIQILWEGSWKPFAEFLSNTFGISIETVADLVGGIILEALKLLADTIKLVADGFTAFSDWCKENKEIISTIANAIGTLATVWQGIKFLSWAEQAGGLAGAFELLSGKVSFIVSGIKDLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKLIAELGKTALELGKSALAWGVHAAQMGLAAAAEIAQSIAAGVAAAATWALNGAIAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0028	shell	direct	high	3041	1.0	GCA_000221985.1_00043
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	32625	32975	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	18373	18723	GCA_000221985_1_1_42	GCA_000221985_1_1_42	+	2190731	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMLTQEEMSQLLHAVSSEFFEVSYSDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0029	shell	direct	high	350	0.997	GCA_000221985.1_00044
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	32980	34296	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	18728	20044	GCA_000221985_1_1_43	GCA_000221985_1_1_43	+	2190731	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLTIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKQSVL*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0030	shell	direct	high	1316	0.999	GCA_000221985.1_00045
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	34269	37220	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	20017	22968	GCA_000221985_1_1_44	GCA_000221985_1_1_44	-	2190731	.	NF033838	pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.	MGKKKMIFASLASAVVLGASLTSVQQLAVKADESNTTNTSKASEKSKKDLEKAEAARKEAEAKVAELQKKVEEAKAKAEEAAKKAKSEADDAKAAEEAKAKAEKAKQAADAELAAAKKEEADAKEAVMKALTELEKDAEAKIKADDKITDKAAAIKKAKERIGKEDLLKAIESGQIKASDVVKELPTKEDENSVITSKDSSLPEEIKAKIQKAQEDDAKRPQSEKLQDKADQLGDEIDSLTKQANKAKAEAEKKAATLVEEQKKLEEAKTAHEAAQAEFEKALALAESYKEDIDARVDDFNETLKKAKEARDNDPEAKAKYDLEDALTQFEKAAEDEINANDQIKNKAAAIKKAKEVIGKEDLLKAIESGAIKASQVLQDLPTKEDESTSTTTGELYSNMEGLPDEIKTKVNQAKEADKQRSESEKLQDKAYQLEDQIDSLTRQANKLKADLDKKAKELEGKDESSSEYQNGKAEFEKSYEVLESYAAEINSLTAEFNNTLEQIEGKKSSEEKKEDQAKAELEAALTELEKEAEAKIREDKSITDKEAAIQAAKAAIGKEDLLDAIESGVIKASDVVNELPTEDAKPASETGDRVGSIKSLPENLKKVIEKAEEADKKRPESEKLQDKADQLEDEIDSLTKQANKAKADLEQKAKALEEQKRKLKEAEAARAAAEAEFNQADALVESYADDINSRVDDFNKTLEEVKEAKAKEPAKSEEETPAQPQEEADARIAELEQKAAESKKTADDATAKAEKENNEAREAENLKAEAEQAQTAAEAELEKAKAEAEKAKAKVEELEKAEKANQEPAPEEPAKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPEQPSESKPAEDSMATPAGGSMGTGFLFGNSSFYYLNSNSSMTRGWKKENGMWYFYNTDCLAS*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0031	shell	direct	high	2951	1.0	GCA_000221985.1_00046
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	37221	37310	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	22969	23058	GCA_000221985_1_1_45	GCA_000221985_1_1_45	-	2190731	.	.	hypothetical protein	MVIQVIQVIQVIQVIQVIQVIKNNNKEVT*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0032	cloud	direct	moderate	89	0.989	GCA_000221985.1_00047
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	37352	37471	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	23100	23219	GCA_000221985_1_1_46	GCA_000221985_1_1_46	+	2190731	.	.	hypothetical protein	MFTQYLSKMMIRTTPTYLVKVEIGLKQIFMVEFSVRCLS*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0033	.	unmatched_CDS	none	0	0	.
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	37601	37807	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	23349	23555	GCA_000221985_1_1_47	GCA_000221985_1_1_47	+	2190731	.	.	hypothetical protein	MVVEKSPIRSIMKSNQTIIRKNHIEQLHFITKLLDIKDPNAQIIDIINKDSHKEIIAKLDYEAPSFPI*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0034	.	unmatched_CDS	none	0	0	.
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	37912	38391	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	23660	24139	GCA_000221985_1_1_48	GCA_000221985_1_1_48	+	2190731	.	.	hypothetical protein	MSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRSLETDTQTTKSEVESG*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0035	shell	direct	high	479	0.998	GCA_000221985.1_00049
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	38345	41131	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	24093	26879	GCA_000221985_1_1_49	GCA_000221985_1_1_49	+	2190731	.	PDB:3GUD_A	Neck-appendage-protein	MRQTRRQLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSPFSFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMMHNGGNGFGIEGQTKSTATREWQRFRLTGPVFFKEDAPSESKLQMILFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSRITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSETADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYNWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0036	shell	direct	high	2786	1.0	GCA_000221985.1_00050
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	41124	41330	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	26872	27078	GCA_000221985_1_1_50	GCA_000221985_1_1_50	+	2190731	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0037	shell	direct	high	206	0.995	GCA_000221985.1_00051
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	41327	41869	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	27075	27617	GCA_000221985_1_1_51	GCA_000221985_1_1_51	+	2190731	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGEPDQGEKEETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0038	persistent	direct	high	542	0.998	GCA_000221985.1_00052
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	41862	42014	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	27610	27762	GCA_000221985_1_1_52	GCA_000221985_1_1_52	+	2190731	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0039	persistent	direct	high	152	0.993	GCA_000221985.1_00053
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	42025	42303	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	27773	28051	GCA_000221985_1_1_53	GCA_000221985_1_1_53	+	2190731	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0040	persistent	direct	high	278	0.996	GCA_000221985.1_00054
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	42319	42795	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	28067	28543	GCA_000221985_1_1_54	GCA_000221985_1_1_54	+	2190731	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLAQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0041	persistent	direct	high	476	0.998	GCA_000221985.1_00055
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	42802	43122	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	28550	28870	GCA_000221985_1_1_55	GCA_000221985_1_1_55	+	2190731	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVAIYNAAKA*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0042	persistent	direct	high	320	0.997	GCA_000221985.1_00056
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	43128	43910	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	28876	29658	GCA_000221985_1_1_56	GCA_000221985_1_1_56	+	2190731	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0043	persistent	direct	high	783	1.0	GCA_000221985.1_00057
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	43919	44236	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	29667	29984	GCA_000221985_1_1_57	GCA_000221985_1_1_57	+	2190731	.	.	hypothetical protein	MRDRVRIMLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSRLIRIQADMYNRGVIYLTGTNLREYIGTVNVKFYRE*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0044	shell	direct	high	317	0.997	GCA_000221985.1_00058
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	44214	44582	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	29962	30330	GCA_000221985_1_1_58	GCA_000221985_1_1_58	+	2190731	.	.	hypothetical protein	MLSFIENRKETTHDTWKMMEDLKQKVNEVYNWTVEDGKPQPPKQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWIGYSPGMSQVVIAVYLIYGGN*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0045	shell	direct	high	368	0.997	GCA_000221985.1_00059
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	44584	45069	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	30332	30817	GCA_000221985_1_1_59	GCA_000221985_1_1_59	+	2190731	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNIKALIKKYEAVECVVGIVSGKTILKTVLRDLKQLDEQKSVKVPQFVAEWIEEARKACKDVAELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYIVSLNNGQPLTKTQSGKVLYFNQNIITGNYKFTRKELEEAGFGWVFDCPGIEIEEVE*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0046	shell	direct	high	485	0.998	GCA_000221985.1_00060
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	45069	45320	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	30817	31068	GCA_000221985_1_1_60	GCA_000221985_1_1_60	+	2190731	.	.	hypothetical protein	MIQTLEEGMKNQSKRIKIPMEIRPFDVGYRIVNKHGQALALKNGASIFALPSLAEKAIKKKFSKDDPDFDIENISLKRSLLSI*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0047	shell	direct	high	251	0.996	GCA_000221985.1_00061
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	45355	45831	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	31103	31579	GCA_000221985_1_1_61	GCA_000221985_1_1_61	+	2190731	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MGDIRILDACCGSRMFWFDKNESHTTFMDIRQEKFEIHGKKVNVNPDVVGDFRDMPFDDETFNLVVFDPPHLKWAGQNSIMRSQYGELDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFEEVTD*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0048	shell	direct	high	476	0.998	GCA_000221985.1_00062
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	45828	46088	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	31576	31836	GCA_000221985_1_1_62	GCA_000221985_1_1_62	+	2190731	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0049	persistent	direct	high	260	0.996	GCA_000221985.1_00063
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	46085	46492	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	31833	32240	GCA_000221985_1_1_63	GCA_000221985_1_1_63	+	2190731	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDLSDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDVLEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0050	shell	direct	high	407	0.998	GCA_000221985.1_00064
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	46485	46664	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	32233	32412	GCA_000221985_1_1_64	GCA_000221985_1_1_64	+	2190731	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0051	shell	direct	high	179	0.994	GCA_000221985.1_00065
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	46651	47163	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	32399	32911	GCA_000221985_1_1_65	GCA_000221985_1_1_65	+	2190731	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDISKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0052	shell	direct	high	512	0.998	GCA_000221985.1_00066
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	47271	47450	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	33019	33198	GCA_000221985_1_1_66	GCA_000221985_1_1_66	+	2190731	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0053	shell	direct	high	179	0.994	GCA_000221985.1_00068
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	47440	47670	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	33188	33418	GCA_000221985_1_1_67	GCA_000221985_1_1_67	+	2190731	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0054	shell	direct	high	230	0.996	GCA_000221985.1_00069
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	47741	48169	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	33489	33917	GCA_000221985_1_1_68	GCA_000221985_1_1_68	+	2190731	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0055	persistent	direct	high	428	0.998	GCA_000221985.1_00070
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	48446	49000	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	34194	34748	GCA_000221985_1_1_69	GCA_000221985_1_1_69	+	2190731	.	CDD:cd01192	site-specific-tyrosine-recombinase	MILVLNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0056	shell	direct	moderate	497	0.895	GCA_000221985.1_00071
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	49214	49510	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	34962	35258	GCA_000221985_1_1_70	GCA_000221985_1_1_70	+	2190731	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0057	.	unmatched_CDS	none	0	0	.
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	49629	49967	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	35377	35715	GCA_000221985_1_1_71	GCA_000221985_1_1_71	+	2190731	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGADLL*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0058	shell	direct	high	338	0.997	GCA_000221985.1_00072
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	49964	51604	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	35712	37352	GCA_000221985_1_1_72	GCA_000221985_1_1_72	+	2190731	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMVECGDIVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0059	shell	direct	high	1640	0.999	GCA_000221985.1_00073
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	51660	52808	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	37408	38556	GCA_000221985_1_1_73	GCA_000221985_1_1_73	+	2190731	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0060	shell	direct	high	1148	0.999	GCA_000221985.1_00074
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	52789	53511	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	38537	39259	GCA_000221985_1_1_74	GCA_000221985_1_1_74	+	2190731	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0061	shell	direct	high	722	0.999	GCA_000221985.1_00075
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	53530	54645	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	39278	40393	GCA_000221985_1_1_75	GCA_000221985_1_1_75	+	2190731	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0062	shell	direct	high	1115	0.999	GCA_000221985.1_00076
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	54659	54949	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	40407	40697	GCA_000221985_1_1_76	GCA_000221985_1_1_76	+	2190731	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0063	shell	direct	high	290	0.997	GCA_000221985.1_00077
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	54942	55130	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	40690	40878	GCA_000221985_1_1_77	GCA_000221985_1_1_77	+	2190731	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0064	shell	direct	high	188	0.995	GCA_000221985.1_00078
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	55117	55506	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	40865	41254	GCA_000221985_1_1_78	GCA_000221985_1_1_78	+	2190731	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0065	shell	direct	high	389	0.997	GCA_000221985.1_00079
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	55499	55897	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	41247	41645	GCA_000221985_1_1_79	GCA_000221985_1_1_79	+	2190731	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTIIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0066	shell	direct	high	398	0.997	GCA_000221985.1_00080
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	55897	56277	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	41645	42025	GCA_000221985_1_1_80	GCA_000221985_1_1_80	+	2190731	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0067	shell	direct	high	380	0.997	GCA_000221985.1_00081
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	56294	56890	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	42042	42638	GCA_000221985_1_1_81	GCA_000221985_1_1_81	+	2190731	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0068	shell	direct	high	596	0.998	GCA_000221985.1_00082
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	56936	57229	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	42684	42977	GCA_000221985_1_1_82	GCA_000221985_1_1_82	+	2190731	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0069	shell	direct	high	293	0.997	GCA_000221985.1_00083
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	57295	57414	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	43043	43162	GCA_000221985_1_1_83	GCA_000221985_1_1_83	+	2190731	.	.	hypothetical protein	MSIRDVMDTSWEDLMGVLGSLETSEQEEVLDLADFLESL*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0070	shell	direct	high	119	0.992	GCA_000221985.1_00084
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	57478	57708	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	43226	43456	GCA_000221985_1_1_84	GCA_000221985_1_1_84	+	2190731	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0071	shell	direct	high	230	0.996	GCA_000221985.1_00085
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	57765	61940	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	43513	47688	GCA_000221985_1_1_85	GCA_000221985_1_1_85	+	2190731	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKIDALSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNVRVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIIAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTINAQDNASGVLAGIRTWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0072	shell	direct	high	4175	1.0	GCA_000221985.1_00086
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	61940	62638	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	47688	48386	GCA_000221985_1_1_86	GCA_000221985_1_1_86	+	2190731	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVAEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGVVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0073	persistent	direct	high	698	0.999	GCA_000221985.1_00087
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	62635	63987	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	48383	49735	GCA_000221985_1_1_87	GCA_000221985_1_1_87	+	2190731	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNESYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSMKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKRLCVFLILRFLPQLSFSI*	hallmark_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0074	shell	direct	high	1352	0.999	GCA_000221985.1_00088
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	64165	64401	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	49913	50149	GCA_000221985_1_1_88	GCA_000221985_1_1_88	+	2190731	.	NF038388	sigma(X)-activator ComW. The pneumococcal DNA-binding protein ComW, critical for natural transformation, interacts with the sigma factor that is a master regulator for competence, sigma(X).	MLQKIYEQMADFYRNIEEEYGTVFGDNFDWEHFHFKFLIYYLVRYGIGCRRDFIVYHYRVAYRLYLEKMIMKQGFISC*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0075	persistent	direct	high	236	0.996	GCA_000221985.1_00089
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	64590	65918	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	50338	51666	GCA_000221985_1_1_89	GCA_000221985_1_1_89	+	2190731	.	PRK01117	adenylosuccinate synthetase; Provisional	MYVRKEEPEGSDKIMTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVTDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEYLPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0076	persistent	direct	high	1328	0.999	GCA_000221985.1_00090
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	66118	66585	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	51866	52333	GCA_000221985_1_1_90	GCA_000221985_1_1_90	+	2190731	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MNYTVEEKEVFMREALRESEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDERLNHRVEVEIGILEDDCAAIMQDFFRNRRKK*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0077	persistent	direct	high	467	0.998	GCA_000221985.1_00092
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	66772	67215	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	52520	52963	GCA_000221985_1_1_91	GCA_000221985_1_1_91	+	2190731	.	PRK13956	dUTP diphosphatase. 	MKIRGFELVSSFTDENLLPKRETAHAAGYDLKVAVRTVIAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFAPFLIADGDAADGVRTGGFGSTGH*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0078	persistent	direct	high	443	0.998	GCA_000221985.1_00094
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	67175	67732	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	52923	53480	GCA_000221985_1_1_92	GCA_000221985_1_1_92	+	2190731	.	2AXN_A	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type	MAFELVDLVQQGTRMKIIFVRHGEPDYRELEERSYTGFGIDLAPLSEKGRQQAQELSTNPLLFSAEIIVSSAVTRALETASYVVCATGLPLRVEPLLHEWQVYETGIENYETARSLFLENKGELLPNSPIQYETAAEMKSRFLECMAKYRDYQTVIVVTHNMLMRQFVPNEKIDFCQVVECELEI*	hhsuite_tools	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0079	persistent	direct	moderate	515	0.923	GCA_000221985.1_00095
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	67914	69107	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	53662	54855	GCA_000221985_1_1_93	GCA_000221985_1_1_93	+	2190731	.	PDB:3BH0_A	Helicase-ATPase	MKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPKNSLTGITLPKEIQVIGVTTIQEVLKKVFA*	rep_hall_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0080	persistent	direct	high	1194	1.0	GCA_000221985.1_00096
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	69180	69677	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	54928	55425	GCA_000221985_1_1_94	GCA_000221985_1_1_94	+	2190731	.	cd03379	Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity.  Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	MSYFEQFMQANQAYVALHGQLNLPLKPKTRVAIVTCMDSRLHVAQALGLALGDAHILRNAGGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFENEPFQEYLKEELGVDVSDQDFLPFQDIEESVREDMQLLIESPLIPDDVIISGAIYNVDTGSMTVVEL*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0081	persistent	direct	high	497	0.998	GCA_000221985.1_00097
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	69698	70513	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	55446	56261	GCA_000221985_1_1_95	GCA_000221985_1_1_95	+	2190731	.	COG2339	Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Signal transduction mechanisms]. 	MYEEKQYFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLPLFYMIPALYFLFRIGKKWEFPKNALILSLLGGMFLAGWLSSFANTYIHDLLGVLFPDSAFLNAFESAIVAPLVEEPLKLFPLVFVLALIPVRKLKSLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSDLAVVGVYLLYRAYKGQKVGKKQGLIFLGLALGTHFLFNSPFVELETELPLAIPVVTAIALYGFYHAYCFVEKHNELMT*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0082	persistent	direct	high	815	0.999	GCA_000221985.1_00098
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	70658	71626	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	56406	57374	GCA_000221985_1_1_96	GCA_000221985_1_1_96	+	2190731	.	PRK02269	ribose-phosphate diphosphokinase. 	MSFSDLKLFALSSNKELAERVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGKHVFILQSTSSPVNDNLLEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLEVAGVDRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGSDYVVVSPDHGGVTRARKLAEFLKTSIAIIDKRRSVDKMNTSEVMNIIGKVEGKTCILIDDMIDTAGTICHAADALAEAGAVEVYASCTHPVLSGPAMDNIQNSAIKKLVVLDTIYLPEERLIDKIEQISIAHLLGDAIVRIHEKRPLSPLFGIEKKI*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0083	persistent	direct	high	968	0.999	GCA_000221985.1_00099
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	71867	72253	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	57615	58001	GCA_000221985_1_1_97	GCA_000221985_1_1_97	-	2190731	.	PDB:4U7B_B	Mos-transposase	MRSNLWGTLEKKNHTYYEQDPEKIALFLKNFNSLKHLAPVYIDETGFDTYFYREYGRSSKGQLIGGKVSGRRYQGISLVAGLTNGELIAPITYQETMTSDFFEAWFQKFLLPTLNTPSVIIMDNARFQ*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0084	shell	direct	high	386	0.997	GCA_000221985.1_00100
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	72201	72548	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	57949	58296	GCA_000221985_1_1_98	GCA_000221985_1_1_98	-	2190731	.	pfam01710	Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes insertion sequences from Synechocystis PCC 6803 three of which are characterized as homologous to bacterial IS5- and IS4- and to several members of the IS630-Tc1-mariner superfamily.	MLYNLLMAYSIDFRKKVLGYCERTGSITKASQVFQISRNTIYGWLRLKEGTEELNHQVKGTKPRKVDRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYALKFMGYTRKKEPHLL*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0085	persistent	direct	high	347	0.997	GCA_000221985.1_00101
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	72643	73614	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	58391	59362	GCA_000221985_1_1_99	GCA_000221985_1_1_99	+	2190731	.	PFAM:PF04754.11	Putative-transposase,-YhgA-like	MILRHPGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTNLEGSNIHVLPSMPYSAQDFYTSIDVLAELDNGTQVIIEIQVHHQNFFINRLWAYLCSQVNQNLEKIRQREGDTHQSYKHIAPVYAIAIVDSNYFSDDLAFHSFSMREDTTSEVLTIINNGQEHHLVKMAFLELKKYRETSKDEVRKPWLEFFGNKPFTQDPERAISQADQLLDYKSWSEEDREMFSQLRMREEQALLAQDYDLEQAEEKGLERGRAEGLEQGLERGLERGRAEGIEQGREEGLERGKLFAFLDMVRQGLLTSEVASHQLGMSVAEFESLL*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0086	persistent	direct	high	971	0.999	GCA_000221985.1_00102
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	73872	74072	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	59620	59820	GCA_000221985_1_1_100	GCA_000221985_1_1_100	+	2190731	.	3IX3_B	Transcriptional activator protein lasR	MKALLGIRKHLCVILVVQPQTQERHRDARQLYYKSQTKEGKSNREIASLLGKAPQTIHTEIKRETV*	hhsuite_tools	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0087	.	unmatched_CDS	none	0	0	.
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	74349	74855	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	60097	60603	GCA_000221985_1_1_101	GCA_000221985_1_1_101	+	2190731	.	PF00292.18	'Paired box' domain	MKSTKEEIQAIKTLLKDSSTAKYHKRLQTVLFRLMGKSYKEIIELLGCNQTTIWPTVKKYEEFGLDSLLQETRGGRNHAYMTVEEEKAFLARHLKAAEAGEFVTIDALFQAYTKELGSSYTRDDFYQLLKRHGWRNIRPRPEHPKKADVQTIVASKNKISIQEDKKAL*	hhsuite_tools	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0088	persistent	direct	high	506	0.998	GCA_000221985.1_00103
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	74887	75321	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	60635	61069	GCA_000221985_1_1_102	GCA_000221985_1_1_102	+	2190731	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MYQDEAGFGRISKLGSCWAPMGVGSHVHSHYIREFCYCYGAVDAHTGESFFLIAGGCHTEWMNAFLEELSQAYSDDYLLLVMDNAIWHNKSAESVNQALKLILKQDKILSITADNGTEFNRLSDVFSEEHIYYAHPYASWEKGN*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0089	shell	direct	high	434	0.998	GCA_000221985.1_00104
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	75630	76532	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	61378	62280	GCA_000221985_1_1_103	GCA_000221985_1_1_103	+	2190731	.	NF033930	pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.	MKKVLLTSAVALAAFGAVQAVSADTATFSEANVQTLPNAKPAADERTEPSAEVSKLFKEAAEAAEAAAKRGEEASGKVNTTENGDLTIDDIKSHLASQQSQQSNKQRVVTDRYVKVYDKEGNELKLDGKAVEIKYEKSANSTVEVKTKRGTYKLTVRVQNGKATLLKTPQLVASAEKPAAQAAWVQSGSRWWYKHADGSYTTNGWEKINGTWYYFDQAGWMATGWVKDNGTWYYLNDNGSMATGWVKDNGTWYYLKSSGAMATGWYQVGGKWYYSYASGALAVNTTVDGYKVNHNGEWVK*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0090	persistent	direct	high	902	0.999	GCA_000221985.1_00105
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	76984	77256	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	62732	63004	GCA_000221985_1_1_104	GCA_000221985_1_1_104	-	2190731	.	PFAM:PF03050.13	Transposase-IS66-family	MHALPADERLQKRQEELHPLMEDFFAWCRCQSVLAGSKLGRAIEYSLKYEETFKTILKDGRLILSNNLAERAIKSLVMGRSKRVQWTLLA*	common_virus_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0091	shell	direct	high	272	0.996	GCA_000221985.1_00106
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	77656	80325	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	63404	66073	GCA_000221985_1_1_105	GCA_000221985_1_1_105	+	2190731	.	CDD:cd08642	DNA-Polymerase-I	MVFFGAFLYNGCMDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEKMGITPTQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLEGIYENIDGMKASKMKENLINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVSESLDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFAWSCGDKLYATDKIELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRLGVDLQAPAFDIRLAKYLLSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYEMEQPLAFVLAKMEIAGIRVKKETLCEMQAENELVIEKLTQEIYELAGEEFNINSPKQLGVLLFEKLGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILDDGKIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPEDVTANDRRNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGAYQTKMLLQVHDEIVLEVPKSELAEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK*	rep_hall_hmm	common_virus	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0092	persistent	direct	high	2669	1.0	GCA_000221985.1_00107
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	80410	80847	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	66158	66595	GCA_000221985_1_1_106	GCA_000221985_1_1_106	+	2190731	.	COG1832	Predicted CoA-binding protein [General function prediction only]. 	MSQEFINPSDGVIRQYLATSKTLAVVGLSDREETTSNRVTKEMQARGYKIIPVNPKAAGGEILGEKAYASLAEIPFPVDIVNVYRRSEFLPDVARDFLKADAKIFWAQLGLESLEAKEILRDGGCDDIVMNRCIKREHTRLIEEA*	mmseqs_cdd	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0093	persistent	direct	high	437	0.998	GCA_000221985.1_00108
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	80888	81124	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	66636	66872	GCA_000221985_1_1_107	GCA_000221985_1_1_107	+	2190731	.	.	hypothetical protein	MKIKEQTRKLAAGCSKHCFEVVDTTDEVSSKHRFEVADRTDEVSSNTVLRLQIELTKSVTYTYGKATLTWFEEIFEEY*	.	hypothetical_protein	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0094	cloud	direct	high	237	1.0	GCA_000221985.1_00109
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	CDS	81121	82131	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	66869	67879	GCA_000221985_1_1_108	GCA_000221985_1_1_108	-	2190731	.	PF03601.14	Conserved hypothetical protein 698	MSFLSKNGAGILACLLISIVSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIDAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKELSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF*	hhsuite_tools	nonviral_gene	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_CDS_0095	persistent	direct	high	1010	0.999	GCA_000221985.1_00110
GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote	cenote	tRNA	18315	18385	GCA_000221985.1	CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985.1_CP002925.1	GCA_000221985.1|CP002925.1	GCA_000221985_1_1	GCA_000221985_1_1@C2	4063	4133	tRNA-Trp	tRNA-Trp	+	2190731	.	tRNAscan-SE score: 59.0	Trp	NA	tRNAscan-SE	.	C2	67879	14253	82132	GCA_000221985.1|CP002925.1@region_14254_82132@tool_cenote_tRNA_0001	.	.	.	.	.	.