core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	9693	11180	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	1	1488	GCA_000223295_2_4_15	GCA_000223295_2_4_15	+	164720	.	PRK05722	glucose-6-phosphate 1-dehydrogenase; Validated	MSSKVIITIFGASGDLAKRKLYPSLFRLYKSGNLSKHFAVIGTARRPWSKEYFESVVVESITDLADSPEQAQDFASHFYYQSHDVQDTEHYIELRKLQNHLNEHYQAEHNKLFFLSMAPQFFGTIAKHLKSEQIVDGKGFERLIVEKPFGTDLASASKLNDDLLATFDEEQIFRIDHYLGKEMIQSIFAIRFANLLFENVWNRDYIDNVQITFAEKLGVEERGGYYDHSGALRDMVQNHTLQLLSLLAMDKPKAFTKDDIRAEKIKVFKHLHKSTDNDLKKLFIRGQYTSGKVDGKKYISYRSEPNVEPESTTETFVSGAFFVDSDRFRGVPFFFRTGKRLTAKGTHVNIVFKQIESIFGSSLQPNVLTIYIQPTEGFSLSMNGKEVGEQFNLAPLTLDYRTDATASGASPEPYEKLIYDVLNNDSTNFSHWDEVRSSWELIDRIESLWANNEVPLHQYKSGTMGPKASFDLLNQFEAHWNWQPDETYRKEGRLG*	mmseqs_cdd	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0001	persistent	direct	high	1487	0.999	GCA_000223295.2_00630
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	11233	12270	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	1541	2578	GCA_000223295_2_4_16	GCA_000223295_2_4_16	-	164720	.	PRK10416	signal recognition particle-docking protein FtsY; Provisional	MRQLDEANAASAETISENFSSLTSTNEAVDANSSIQEETVQEKYDRSLKKTRTGFGARLNAFFAAFRSVDEEFFEELEELLITSDVGVQVASNLTEELRQEACLENAKKPDALRRVIIEKLVDIYEKDGQFNEKINLQDGLTVMLFVGVNGVGKTTSIGKLAYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVYDGMERAKDENVDILMIDTAGRLQNKDNLMAELEKIGRIIKRVDPVAPHETFLALDASTGQNALVQAKEFSKITPVTGIVLTKIDGTARGGVVLAIRQELDIPVKLIGFGEKIDDIGVFNSENFMKGLLEGLV*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0002	persistent	direct	high	1037	0.999	GCA_000223295.2_00631
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	12267	12734	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	2575	3042	GCA_000223295_2_4_17	GCA_000223295_2_4_17	-	164720	.	.	hypothetical protein	MGLFNRLFGRQKEEKPVENILEEAVEIVPEDNQGKNLEIAEKDSVENAQSENLDEQKLQTELKERLAEDKTRLETIQEKVEEIDSDMAETEARIESDERDSQVPESHALQSEMADSQPVNKEKSFSQTPTQQAGAAADLQARLVEARRLQAEQEK*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0003	persistent	direct	high	467	0.998	GCA_000223295.2_00632
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	12747	13409	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	3055	3717	GCA_000223295_2_4_18	GCA_000223295_2_4_18	-	164720	.	cd07516	phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	MELFLNELGVANQEDEYTITFNGGLVQRNTGEILDKTVFAYDDVTRIFEETEKLGLPLDAICEGAVYQIQSDHESLYQTCNPALTFESVSFADLSSQQTYNKCVTAYAPDLLDRGIAQFSSDLFDKYEIFKSRDMLLEWSPKNVHKANGLEKLISHLGIEQSEVMTCGDEANDLSMIKWAGLGVAMQNAVAAVKEVANVVTPMTNDEDAVAWAIEKHVLK*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0004	persistent	direct	high	662	0.998	GCA_000223295.2_00633
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	13558	14430	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	3866	4738	GCA_000223295_2_4_19	GCA_000223295_2_4_19	-	164720	.	cd07518	Escherichia coli YbiV sugar phosphatase/phosphotransferase and related proteins; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli YbiV can act as both a sugar phosphatase and as a phosphotransferase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	MREVVLGFELHNPLGFCTPLKGKWLDCMIKLIATDMDGTFLDDKGQFDMVRLKNLLLRFKEKSIYFAVASGRGLLSLEKLFEDVQDEIIFIAENGSLVEFRGKDLYEATMSKDFYLSAFEKLKTSPYININELLLTGKKGCYVLETVDPAYLAFSTHYNENIQKVARLEDITDEIFKFTTNFSEETVAAGEAWVNQHVPGVKAMTTGYKSIDIVLDYVDKGVAIVELAKKLNLEMDQVMTFGDNLNDLHMMQVSGYPIAPENARPEILEVAKEVIGHHAAHSVMTYMEGL*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0005	persistent	direct	high	872	0.999	GCA_000223295.2_00634
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	14515	16047	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	4823	6355	GCA_000223295_2_4_20	GCA_000223295_2_4_20	-	164720	.	PDB:4BQQ_A	Integrase	MKKVITIEPAKQVTHMVDLPSFTKRRVAGYARVSTDHEDQTTSYEAQMTYYTDYINSRSDWEFVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKSVSRFARNTVDSLSTVRKLKEAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSISENVTWGRRHQLAEGQVTFSYSQVLGFKKCDTGGFEIDQEEAKIVRYIFHQVLLGNNPNKIARELTAQGIPTPQGKRKWSYGTVKRMLRNEKYKGDALLQKSFTTDFLTKSTKPNEGELPQYYVENNHEAIIKREVFDLVQVELDKLEKKRQTSNIFTGRLFCGDCGSAFGSKVWHSTSKYKRTIYQCNAKYKGEHKCQTPHVTEEEIKGWFLSAMNQLLGNREEIIANTELLIDMAKDTTPLESEIADLERHLETIRQDIEDLVDRNARKAQNQDLYQEQYDTLVTAYQEKQKELQETRSALEEQKSKQLSLDGFIQKFKEQDASSQTSTKNSGRPALSDWISKKIRKSA*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0006	shell	direct	high	1532	0.999	GCA_000223295.2_00635
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	16016	17257	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	6324	7565	GCA_000223295_2_4_21	GCA_000223295_2_4_21	-	164720	.	PDB:4BQQ_A	Integrase	MKQIKTIQAQKVTTIKRLKVAAYTRVSHTSLLQSLSNQISHYSQMIQANPEWDYVGVYSDSAISGRSQAHRRDFQQLLEDCHKGKIDLILTKSISRFGRNTVELLETVRELKRLGISVRFEKEKIDTLTAEGELLLTLLASMAQEESQSISQNIRWRVKKRFEEGKPYIPQDIFGYRWNGEEYMIEPHEASIVRQVFEWYMEGLSAPKIAKRLDDRGERTRLGNRFTQRVIYNMFDQEAYCGRLILQKTFRDHFSSRSIPNDGQMAKYIVENAHEAIVTPEYFQLVNQEKKRRARRRVSKHDALARLQGKVYCEHCGLDMILTLETKSNQEKRVRYYCRTRDGKGVEACLGRTVTEEQLFQAFGESINIEDIHHISFNSVTNEAKVTYRNGKENTSSFRKDGRHEKSYHDRTS*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0007	shell	direct	high	1241	0.999	GCA_000223295.2_00636
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	17314	17475	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	7622	7783	GCA_000223295_2_4_22	GCA_000223295_2_4_22	-	164720	.	pfam20612	hypothetical protein	MTEQDFQQELTYQLTMAQAKKLLSQGLISEAIFQEFKAKMLQKYEPFMSQLVA*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0008	shell	direct	high	161	0.994	GCA_000223295.2_00637
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	17472	17873	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	7780	8181	GCA_000223295_2_4_23	GCA_000223295_2_4_23	-	164720	.	PFAM:PF05766.11	HNH-endonuclease	MTPEQKAAIRYLREQGLGYKAIGVKLNLSSNTIKSFCRREVIEAGEKTDELLPDYCHACGRVLTHIDGKKKKRFCGTSCRQIWWNSHLEEVNRQAYTEHVCLACGGEFTSYTNPKRKYCSRKCYVTARFGDKK*	phrogs_hmm	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0009	shell	direct	high	401	0.998	GCA_000223295.2_00638
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	17982	19451	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	8290	9759	GCA_000223295_2_4_24	GCA_000223295_2_4_24	-	164720	.	PDB:5UDN_B	lysin	MGKHLVICGHGKGRTTYDPGAVNTKRGITEAGKVRELAKLMSKYSGKNIDYITDQNVYDYKSLASIGKGYDSITELHFNAFNGTARGTEVLIQSSLTADKEDLAILSVLSRHFQNRGIKKVDWLYNANEAKNRGYTYRLVEIAFIDNEEDMTIFDNKKEELAKGLVSAITQEEVKTVVSATPSKQGGQPNSSTSPVYHVGDSVRVLGHATHYQTGQAMASWVKGRSYKVLQIKAVNQSRSKRAYLLEGITSWVLEQDVEGTTLGHSEQTYTAQKGDSYWRIARKFGTTVDGLLALNGLKKTDVLKIGQTLKVHKATSSIKAVATSLAQRTVASALSKVGQKVTVPTNPYGGQCVSLVDKIVQEMTDKDMAYTNAIDCLTKAKSNGFTVIKDAWGVNPKAGDFYVIKTDGHPYGHIGICITDSDGTTIDGVEQNVDGYSDHNKNGINDQLEIGGGGITRRVKRVWMADGSLYDVTGTVKLGKVIGWFRLG*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0010	shell	direct	high	1469	0.999	GCA_000223295.2_00639
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	19453	19734	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	9761	10042	GCA_000223295_2_4_25	GCA_000223295_2_4_25	-	164720	.	PFAM:PF05105.11	Bacteriophage-holin	MTGVFAAVVEKNISSSIGFKGIFKKIAILFLVSVGHLIDTEIIKQGGAIRSMVIFFYLSNEGLSILENAVRIGLPIPEKLQALLKQFNEKEGD*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0011	shell	direct	high	281	0.996	GCA_000223295.2_00640
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	19874	21730	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	10182	12038	GCA_000223295_2_4_26	GCA_000223295_2_4_26	-	164720	.	PDB:5IV5_CF	Baseplate-wedge-protein	MADYGSNNDRGYTLLLRVEETGTSTANNTSTVRVQLWLKNGYTTFGMYDCRASVSINGQTLSWSGRPDMYTAHSSLHLIDKTITVPHDSNGSKTISFSATFSGSGGWSPGTLNTGSQTLRLSDIPRSSSATVSGNMMGQAVTITIKRASSDFTHNITWHFGSLSGTIGTGIATSVTWTPSISQLATQIPNSTSGNGHLTLATIYGGKTIGSMTIPITLNLPTSVVPTLGSISVSESHVTAKTILTGTSFAQLVSNPKVTFNQGVGVYGSTIPSTGFRAEVFKFENNQWVQLPNVATSNNGLLGGINWIGRAKVSAYVTDSRGRQSARKEVEITLLEYFKPIFSFSAVRAGSSMNQVTVTRKLKIAPLTISNVQKNKATLTWEVVDLASGQKVTNAGGAANWTSTTEHTKTDFQTILGGTYDTTKSYNIIGKLADLFYATTFEFTVGPEKVVYGLSPSGMGIGKAWTRGVLDVEGSLPAYFDGEIYMKNKKLLDIFYPVGVIYESTSNISPATIMGGSWERFGNGRVLVGVSENESEFNSVNKTGGSKTHTLTIDEMPSHSHAQYVSANNGNKAIRRDYGSDGNSNTYPQGNNTGNTGGGKPHNNLQPYVTVYRWRRIA*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0012	shell	direct	high	1856	0.999	GCA_000223295.2_00642
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	21743	24661	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	12051	14969	GCA_000223295_2_4_27	GCA_000223295_2_4_27	-	164720	.	PDB:3GS9_A	tail-protein	MMLYLLGGQTKTPKWNGQPLFETVSATVEEELNGTFQLHLTYPITDSGIHETLRADELILCPTPDLGKQLFRVKQVKIQDDTIELECYHISDDMMKRQIKPFSATNTTCQSVLMRLVEACPSDLGLFSFDSDVTERHTFVSDEDLTLYQALMDGKHSLLGIWEGELVRDNFQLIVKQHRGNDKGVILTSHHNLKAFEDKGDSEKVITRIYATSTFQAEGSDVDTVLSVVVESPLINQYPYIYEERYENNTLQTEEELRQWAMAKFTHEHIDHISRQITVEAYQLDGQEVHLGDTVTLKSQKHKVDVKKKAVGYTFDALEEVYLSVTFDDEVSVRNSGSSGVNSLTSAAKTILDVNQSVTEHRASKERANFNKVFDRQFERLQTEVEDGIAMAKAEGERSGKKAALDYLATDALEARVAALQKAKIDELTVSSSAWMTRLVSQQILSEYVKSLEVEADRVVIPGQHTPVFSLDRDGNLSIDTPILKVRGESLATKVDLKTISLTPGPKGDAGADGVGIQSRELYYLVSAQKTGLTTTSTGWSKTIPSLTTTLKYLWNYEKTTFTNGSTTVTTPVVIGVYGDKGVDGKAGKDGKTLYTWRMYADSDKGDGISAVSTGKRYLGLAVNRESATPSTNPSDYTWSSFFEGTELGGRNYIDDYAMKAATFSSVTSEWKKEVVEDTSSVSGVTVKMTCTKAGTAGFHRNFYDLRSRIGAAMTFSIDIKCSKTVTLNIGSELGGTKAYEVTTDWQKFVSSWKVSSNQYYSYVFYLKSGVWAVGDVVYLRNVQLEDGNVASAPGPSLNDLIAQIDAKADNSFMKQQLDLLTEKTESLRVDLEARALAKEVADWLKSYKEFEKNNEAVLAQFNQDFIDNTARIAAIEADLKANSLLLNFVNTYLRAGDNGVIIGKKDNSEYIELTPQGMMIKSAGNAVMTVTAGVIKIHHGVFVETLQVGYYRLEAARHNAKHLVCRFIDAK*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0013	shell	direct	high	2918	1.0	GCA_000223295.2_00643
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	24658	24987	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	14966	15295	GCA_000223295_2_4_28	GCA_000223295_2_4_28	-	164720	.	PDB:2X8K_A	Distal-Tail-Protein	MDRQVLSANGVLKTQGSALAFPTITITGQSVSETSFTVGDQVIRIEKFTEPLVMVNHPDRPSFKTLSGKAVKWSGDFITIDASHPTQSVGVVLGSGILSLTFEMNWGWV*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0014	shell	direct	moderate	315	0.955	GCA_000223295.2_00644
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	24969	25382	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	15277	15690	GCA_000223295_2_4_29	GCA_000223295_2_4_29	-	164720	.	PDB:2X8K_A	Distal-Tail-Protein	MIKHNELVLNGKGTSSFPFKVLVEDRPSIQVPRSKTQLLDHRGLSGAIVQTNKHRDVIEKPYRLYLIGASEKEVNEFSAYLMQEGFWLESERLKLTRLWCYRTDSFDIKQDDHDVYVSDVTFIYHPTRFLRVWIGKF*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0015	shell	direct	high	413	0.998	GCA_000223295.2_00645
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	25379	28498	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	15687	18806	GCA_000223295_2_4_30	GCA_000223295_2_4_30	-	164720	.	UniProtKB:R4KJ43_9FIRM	Minor-tail-protein	MAGNIKGITIEIGGDTQPLQNALKGVNKQASEATKELRQIDKALKFDTGNVTLLTQKQEVLAKQVETTKEKLSTLRQAQSQVEAQFKAGNIGADQYRAFQREVEGTQTVLKGYESKLESVNRALSENGAQVETNQSKLNRLQNEQAQLVSESEKLNSSFKLQESALGSTASEADKLALAEQKVAYHSEILEKEIHNLEQQLSLTKSEYGENSIEANKLEKTLNETKTAYNNLQNEMEELASSSASSKASLEETNSLLKADLLMEFGDQLGELSQKLIDFGQQSLDAFLEVDEGMDIIVTKTGATGSALEEMTDIAKSLATELPTDFNTAGSAVGELNTQFGLTGDALKSASTQLIQFSEINGSDVTSSAISAKQAIEAYGLEATDLSSVLDTVTYTSQATGVGVQELMDKAVAGAPQIKALGLSFDEGITLMGQFEKAGVDSSAALSSLSKAAVKYAGDGLTLQEGLAGTIEQIKTSTSETEALSLASEIFGSKAAPRMVDAIKRGALSFEDLAGTADKAAGIVTQTYEGTLDPIDKFTTAQNTAKLAMAEMGDAIAATLAPILEVLASLLQAVATWFSGLSEPVKQFIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVGIILGVIAVVALLVVGIQQLWQHHEGFRTAVTEIWNAIHAFLSVIIQQISSFVMSIWGTLTTWWTENQQLILNAANTVWTAISTVIQTIMTILGPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQLITGDWSGAWETIKQAVSTVWEAIKSLISIVLNAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVSSIWNGMKATISGVLSGISSTVSSVWNGVKSTITNAINGAKNAVSSAINAIKNLFNFKIKWPHIPLPHFSMSGSANPLDWLKGGLPKISIQWYAKGGILTKPTAFGMTGNSLMVGGEAGREAVLPLNNQTLGSIGRSIAATMPNKGTTITVNITDVVIREEADMKKLADYVAGRLADEMARQALLRGGTV*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0016	shell	direct	high	3119	1.0	GCA_000223295.2_00646
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	28681	29100	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	18989	19408	GCA_000223295_2_4_31	GCA_000223295_2_4_31	-	164720	.	PFAM:PF12363.7	Tail-assembly-chaperone	MRQNITIAGKTYPLATNAYTPIAYKEQFGKDYFQDLFNMLSAESIMTQLEQLEEGEELKASQIDLSILSDFDMTFFHRLFWVFAKSANPRIKPFEDFFMSMEEFPLQEVGPVLMSMLNQGMTTRKKQMNQKQRVRKSSR*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0017	shell	direct	high	419	0.998	GCA_000223295.2_00647
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	29112	29681	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	19420	19989	GCA_000223295_2_4_32	GCA_000223295_2_4_32	-	164720	.	PFAM:PF04630.11	tail-tube-protein	MAEKNKVTFGLQDVHWAEVTSEGADGALTYGTVERLRGAAELTLEPTGDKGSYKADNINFYTTESNDGYEGTLKVALLSQEFLTRVLGEQLDATTNTISEIASSKKKNFALMFRFEGDKKETLHVLYYCYASRPNVGSKTKSGSDINEVELTFTASPRPLDKIVRRRTTEETSDEIRENWFKSVFEPIA*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0018	shell	direct	high	569	0.998	GCA_000223295.2_00648
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	29684	30010	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	19992	20318	GCA_000223295_2_4_33	GCA_000223295_2_4_33	-	164720	.	PDB:3FZ2_H	tail-completion-protein	MRFEDLFPVLKETKLPVAYHHLEEGHSPSPPFVVYLVTDSDNLGADNWTYHKRLNVQIELYTTKKDLATEKTVESVLDAHRLYFDKVETYITSEKLYQTIYSITLLGG*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0019	shell	direct	high	326	0.997	GCA_000223295.2_00649
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	30019	30387	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	20327	20695	GCA_000223295_2_4_34	GCA_000223295_2_4_34	-	164720	.	PFAM:PF04883.11	putative-tail-component	MTRIGLDDLASVIEKELTTYAKETTDTMREVVEEVTDAAVENLMVMSPKRRGKYARGWKSKTTTDTNTALTKTIHNRTPGLTHLLEDGHAKQNGGRVEGRKHIAPVEKRVIQSFEDKLRQKL*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0020	shell	direct	high	368	0.997	GCA_000223295.2_00650
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	30380	30718	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	20688	21026	GCA_000223295_2_4_35	GCA_000223295_2_4_35	-	164720	.	PDB:2KZ4_A	Head-tail-adaptor	MKIAHLREQLVFQEKRIRQDAIGNESAIWDNLFMRWCSCRPLALTESDGSATKLIHNKVQFTLRYDKKVLTLNTLTSRIYFRDHFYAIESLDGDTVPRQLIYIVATKEESYD*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0021	shell	direct	high	338	0.997	GCA_000223295.2_00651
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	30718	30975	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	21026	21283	GCA_000223295_2_4_36	GCA_000223295_2_4_36	-	164720	.	CDD:cd08054	Head-Tail-Connector-Protein	MITLEEAKLYLKVENDEEDFLIEQLIATSQQLCEDILRQSSTSEVLKTAILYGVAFLYEHREEANHKELKETLYHLLLADRKDVF*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0022	shell	direct	high	257	0.996	GCA_000223295.2_00652
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	30972	32090	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	21280	22398	GCA_000223295_2_4_37	GCA_000223295_2_4_37	-	164720	.	PFAM:PF06673.10	Major-Capsid-protein	MVSDEDSKRYEEMEAKIELYNKEIARLERQEKIDLELAQPNSHALTTQPTVIVDNQKEDEKKGVASDIYTQTFWTSVRKRNFYDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIKTSSGERKIPVVTGHGSASWMDENGLYPETDETFGQVTLDSHKIGTAIRISEELLNDSVFDLESYMTSEFARRIGTEEEKSFLVGDGSKKPTGIFTQADVEGPTTATKDITFDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFAPLPESGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEAVKILTIKGKGL*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0023	shell	direct	high	1118	0.999	GCA_000223295.2_00653
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	32193	32891	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	22501	23199	GCA_000223295_2_4_38	GCA_000223295_2_4_38	-	164720	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MRQFWNFTDEGEVRTLRIEGQIADETWFGDEVTPQLFKKDLLSGKGDITLWINSPGGDVFAAAQIYNMLMDYKGNVHVIIDGLAASAASVIAMAGTTVSMSPVAMMMIHNPWTFAQGEAKDMAKVIEMLGEIKESIINAYELRTGLSRTKISHLMDSESWFNAKKAVELGFADKVLFEKEETPEQDHQNSYTFSRVTAAHDLVVKLQASLQPPKPQKTIPINQLEKRLNLLK*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0024	shell	direct	high	698	0.999	GCA_000223295.2_00654
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	32866	33126	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	23174	23434	GCA_000223295_2_4_39	GCA_000223295_2_4_39	-	164720	.	PFAM:PF04860.11	Portal-protein	MLRGDYQSRMNGYAIARQNGWLSTNDIRELEDLNLLSDEEGGNLYLINGNMTKLKDAGGFMKQPSETDPAEDLPEEEEDATILEFY*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0025	shell	direct	high	260	0.996	GCA_000223295.2_00655
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	33132	34172	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	23440	24480	GCA_000223295_2_4_40	GCA_000223295_2_4_40	-	164720	.	PFAM:PF06074.12	Portal	MGLLDLLGRKRARDKPQNSYEGQDFSYLFGRTTSGENVDEFKAMQTTAVYACVRILAEAVASLPIHVYELTSNGKEKKIDHPLYFLLHDEPNPEMSSFILRETIMSHLLIWGNAYVQIIRDKAGRVISLYPLLPDKMSVHRDDSGKLYYKYQRQTEENPNFKDKGTVLLKQEDILHVPGLGFDGLIGYSPIAMAKNAIGMTLATENYGAAFFKNGANPGGVLEHPGILKDPKRVRDSWNAVYNGATNAHKVAVLEEGMKYTQVGIPPEEAQFLQTRKFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFYLKKRSVTLSSLM*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0026	shell	direct	high	1040	0.999	GCA_000223295.2_00656
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	34551	36143	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	24859	26451	GCA_000223295_2_4_41	GCA_000223295_2_4_41	-	164720	.	PFAM:PF03354.14	Terminase-large-subunit	MTYHYEPSPFMLPTSHYDKARADRAVTFISNLAHTKGKWAGKKFDLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQASIVFDVAKQMVLMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDKNSICYELHTKALDILKGRKKDTSFYPVVYGLSDEDDWNDEANWLKANPSLGHTIGIDRVREAYQQALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNAPIDYEALKGRDCYAGLDLSSTSDITAFVLVFPPRHSGENYIILPFFWLPEDTLELRCRRDHVLYDVWERQGYIKTTEGNVVHYGFIEAFIEQLSETYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKELYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQGDETSVYDERGILSF*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0027	shell	direct	high	1592	0.999	GCA_000223295.2_00657
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	36140	36613	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	26448	26921	GCA_000223295_2_4_42	GCA_000223295_2_4_42	-	164720	.	PFAM:PF05119.11	Small-Terminase	MAVRGRKPKPTNLKILEGNPGKRPLPTNEVKPKQKAPRCPQWLEDDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDAEVGTGDEMEDLLGDIL*	hallmark_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0028	shell	direct	high	473	0.998	GCA_000223295.2_00658
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	36822	37109	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	27130	27417	GCA_000223295_2_4_43	GCA_000223295_2_4_43	-	164720	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MSTTKQEENNSMTTQTTLENAYSLYPATASIVPFKNWLIIAYQSYKGINLHIFETVENLDEFPQEERRFNLIIDSEETFQDQGHAVKWAFETLGA*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0029	shell	direct	moderate	255	0.885	GCA_000223295.2_00660
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	37138	37728	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	27446	28036	GCA_000223295_2_4_44	GCA_000223295_2_4_44	-	164720	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MTNPKLTDEARCITARYTAGATKRTAMNSGVLEVQPILTPDRVTKRQNGRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAEVGDSVDLSYPGSQTRRARVGKGIAHNLSCGGQMGAVVWKGRVVKIRRLTPRECFRLQGFSDDLFDKAQAVNSDAQLYKQAGNGVTVTVVYAIGKAMLEANKSANNKQK*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0030	shell	direct	high	590	0.998	GCA_000223295.2_00661
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	37777	38418	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	28085	28726	GCA_000223295_2_4_45	GCA_000223295_2_4_45	-	164720	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MTLTFLDFFSGVGGFRRGLELAGMTCLGYYEKDKFARKSYEAMYDTEGEWFHDDITRIDPTQLPKADLWTAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLIQSQKEEDKPEWVLLENVKGLLSSGGGRDYLDYLSILDEAGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRQILPLSGEGGSHLKQLIGGMQSYRVYDPSGIAKTLVG*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0031	shell	direct	high	641	0.998	GCA_000223295.2_00662
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	38415	39671	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	28723	29979	GCA_000223295_2_4_46	GCA_000223295_2_4_46	-	164720	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MTTQPNMEIKELPLSDLKPASYNPRKKLKKGDKEYEKIKQSLLKFGYVDPIIVNEDLTVIGGHQRLTVLKDLKYETAKCVIVSLSKEDEKALNIALNKITGQWDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSEDDFDVEEELKKPTVARRGDIWQLGKHRVICGDSTKAETYDQLLGDKKANLVVTDPPYNVDVEETAGKILNDNMSDGDFYQFLYDMFTQVESHMEADASIYVFHADTEGLNFRKAFKDAGFYLSGCCIWKKNSLVLGRSPYQWQHEPCLFGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIQLMAYPIQNSSMRGTLVLDPFLGSGSTLMAADQTGRVCYGIEVDEKFVDVIVKRYMESTANSDVTVIREGQILTYDEAKAQMEEHL*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0032	shell	direct	high	1256	0.999	GCA_000223295.2_00663
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	40785	41174	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	31093	31482	GCA_000223295_2_4_47	GCA_000223295_2_4_47	-	164720	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MTGRKIVADTYGGFSHHGGGAFSGKDPSKVDRSAAYMARKIAKDFVREGYAKRCEVQLAYAIGVAEPVGVYVNTFGTSDYALEQLVGVVRERYDLTPQGIIKELNLLDVDYTKTTCLGHFTKPYLPWEQ*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0033	shell	direct	high	389	0.997	GCA_000223295.2_00665
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	41161	41838	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	31469	32146	GCA_000223295_2_4_48	GCA_000223295_2_4_48	-	164720	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MEEKMILTSEQVSSGHPDKLCDQISDAIMTECLKHDKNSRVAVETLIKDNQVVVAGEVSTKHFFNLEGIVKKVLEPYDMEDIMVTNLLGVQSPDIAQGVNKGGAGDQGIMFGYATDETPEFLPLPYVLATRVLEKLTSLGHPALGKDAKAQVTYDYENKRIETFLVSIQHDEEVDLASVKRIVTQAMISVAQRYRQNLDFRVLVNPTNRTLCSRRLLRRRWCDWS*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0034	shell	direct	moderate	666	0.982	GCA_000223295.2_00666
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	41874	42101	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	32182	32409	GCA_000223295_2_4_49	GCA_000223295_2_4_49	-	164720	.	.	hypothetical protein	MYGNITLQKQEEVVKMTKGQQEKLNALLTAIAQEELLVETLETRKSDTLDFYDVSVWGIKRALERAYEAGQQSVK*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0035	shell	direct	moderate	183	0.803	GCA_000223295.2_00667
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	42250	42726	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	32558	33034	GCA_000223295_2_4_50	GCA_000223295_2_4_50	-	164720	.	PFAM:PF05263.10	transcriptional-regulator	MDKAEYILTHYNELKGDLEMLKYRLENFKPVTENEVIGSLVFERSDEPKVTYTPSNQRSEVLALSFRDKMIQENEELLADLTQRYIRLVNDLDNFEMAIRFLKDDLAEFAQEMLKPECNWDSLMREFHISRSTVRNWRRKVLDHVRGVYLKMGYSLEK*	phrogs_hmm	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0036	shell	direct	high	476	0.998	GCA_000223295.2_00668
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	42719	44095	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	33027	34403	GCA_000223295_2_4_51	GCA_000223295_2_4_51	-	164720	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MKLSLHDYQEVTKDFIIRTPYTAVILDMGMGKTATTLSAINELMFDRYEVSKVLVIAPLRVANTVWSDEIEQWEELRHLRYAKIVGTPKQRRAALEQDADIYIVNRENLPWLVEQCSSYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRVVGLTGTPTSNGLMDLFAEFKVIDGGKRLGRFIGEYRSRYFREGARNGQVVYNYIPMDYAECQIYDKIDDITISMKAMDYLKMPELISTKKVVHLTDKETENYKQFRKDYVLSDLEENEVTAANAASLSNKLVQMANGAVYSDDNQVVSLHDQKLDALEDIIEAANGEPVLIAYWFKHDLQRIEERLAKLKVKGTVLKTEQDIREWNKGNISVGLLHPASAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWRQGQQADTVVIQHIVTEDTIDEEILKALENKDAQQSRLIEAVKAQVGGTDG*	rep_hall_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0037	shell	direct	high	1376	0.999	GCA_000223295.2_00669
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	44115	44375	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	34423	34683	GCA_000223295_2_4_52	GCA_000223295_2_4_52	-	164720	.	PDB:4QBL_E	Nuclease	MTKGFVMREKVVEQKLVSEVKKRGGICPKWVSPSFGGVPDRLVFLPKGKFGMVELKAPGGKPRLLQVTRHKMFDGLGFKVHVLDSI*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0038	shell	direct	moderate	243	0.931	GCA_000223295.2_00670
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	44638	46926	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	34946	37234	GCA_000223295_2_4_53	GCA_000223295_2_4_53	-	164720	.	PFAM:PF04735.11	dsDNA-helicase	MQFTLSHSGQTGIQTTTVYPHQVMISDKTTLQKVAHFDHVAGLFTNNTRSNANFIKSDVLVMDIDNDHTDTPDEWVTEELLKELFADYNFALASSRNHMVQKGDKAARPKFHIYFQINEVMDKDVYALLKEELVNRYGFFDTNAKDAARFFFGNPNAQVLWHDSWLTIDEDLLDDMVAQDGEEDFDADFYQPPTGPITEGSRNSTMSVFAAKILKRLGVTKEARDGFDEQALKCVPPLEKGELDTIWGSAVRFYNKTIKNSKDYKLPEEFQRESLKPDDYSDVGEAGVLAREYANKLAYTNATDYLFYDGTHWRENKQLALGAVVHFTDDQLAEANTFLEATEKQLQSSGIDEMTIKAGGKRLENAVETPLQLKYLKAYLVAKEFHKFVMKHRDYKNLMAVYNTAKPMLTVELSELDSDDMLLNTPEATYDLRQGTKGQQAHNPDDYITKMTAVSPSDKGHDLWQESLATFFCNDQELIDYVQKIIGMAAIGKVYQEHMIIAYGGGANGKSTFWNTIARVLGSYSGKLSAEALTMSSKRNVSPELAELKGKRLVIASEMAEGMRLNTAVVKQITSTDEIQAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGTWRRLVVIPFNAKITSRSDIKNFADHLYDHAAPAIMSWIIEGAEKAIKANFKTSVPVAVSNSVKAYREANDWLGHFLSDCCEVGDQLTEKSGELYSQYRAYCAKNMEYTRSTTDFYSALDQAGFRRKRTSKGNLILGLKLVEDDYDFLD*	rep_hall_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0039	shell	direct	high	2288	1.0	GCA_000223295.2_00671
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	47174	47287	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	37482	37595	GCA_000223295_2_4_54	GCA_000223295_2_4_54	+	164720	.	.	hypothetical protein	MENTINRQEQEDLTDTLIAISVIARLLARKLQKEETK*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0040	shell	direct	high	113	0.991	GCA_000223295.2_00672
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	47284	47607	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	37592	37915	GCA_000223295_2_4_55	GCA_000223295_2_4_55	+	164720	.	.	hypothetical protein	MSQHKQLLELITEMEGTAKYYLRLVDEFKKLLSSEEETETTSEEPKPEPQKVLKLEDVRAVLATKAKDGYKNEVRALLNKYGAESLSALANEHYAAVLEEAGGIGND*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0041	shell	direct	high	323	0.997	GCA_000223295.2_00673
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	47555	48721	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	37863	39029	GCA_000223295_2_4_56	GCA_000223295_2_4_56	+	164720	.	pfam10926	Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	MSTTQLFLKKLEELAMTNHAVLSASASHRWLNCPPSVRLTEEMPDVTSEFALEGTDAHELCAYLVEKALGRKVRDPTKDLSFYNEEMQTCAEEYRNYVMEQVEKAKGYSRDPTVLVEQRLDFSIWVPEGFGTGDCLIVADGLLQVIDYKHGLGILVDADHNPQMMCYALGALEMFDDLYDFDKVTMTIFQPRKNNISTFEIDKAELLEWAETELSPKAELAFKGEGEMTSGKHCQFCKLKNVCRKRAEDNLALAKMEFREPSTLDYEDIAEILPKLDLLVSWASDIKAYTLKEATEGHSIPGYKLVEGRSVRKFSDEAAVSQAVIKAGFDPYERKLLTITAMSKLLGKKTFNDLLGGLIVKPSGKPTLVPLDDSRQEMNLAKNEFKEV*	mmseqs_cdd	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0042	shell	direct	moderate	1121	0.961	GCA_000223295.2_00674
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	48726	49289	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	39034	39597	GCA_000223295_2_4_57	GCA_000223295_2_4_57	+	164720	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSTKVQTTKVITGKSTRFSYLNANEPKSINGSTPKYSVSLIIPKDDIETVDKIKAAIELAYKEGEAKLKGNGKTVPALSILKTPLRDGDLERPDDDAYRNAYFVNANSPHKPGVVDGNRQEIIDTSELYSGIYGRASISFYAFNSNGNKGIACGLNNLQKLRDGEPLGGRTRAEDDFATDDDDDFLN*	common_virus_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0043	shell	direct	high	563	0.998	GCA_000223295.2_00675
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	49509	52406	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	39817	42714	GCA_000223295_2_4_58	GCA_000223295_2_4_58	+	164720	.	CDD:cd08642	DNA-Polymerase-I	MKGQTMPIKELSIDLETYCEVDLRKSGVYRYAEDDSFEILLLAVSVDNEPVTVYDLTKEELPDEILQALVDDTIIKWAFNASFERICLSNWLNKHHPELLSEGFLSPNSWRCSMVWSAYLGLPLSLEGVGTVLKLKNQKLKEGGDLIRYFCLPCKPTKVNGGRTRNFPNHAPDKWSAFIDYNKRDVEVELAIKEKLRNQPVPDFVWDEYHQDQIINDRGIGIDIDFVKAAIAIDGESKTKIQEELRELTGLENPNSVLQMISWLREHGVTTDSLDKKAVKELLKTVDDKTAQVLKLRQQAAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARELFKTGDLEATELFYDTQDTLSQLIRTAFVPNHSKKFIVCDFSAIEARVLSHIAGETWRSKVFEQGKDIYCMSASQMFGVPVEKHGQNSNLRQKGKIAELACIAEGELVLTNKGLVPIEQVSTKMKVWDGLNWVSHEGVIYKGKREVISYDGLTATPDHLVWIEGKSEPVPFGKAATSSSRLLQTGNGRRAIRLGKDHKPRETVESKDESLLCSHPMSEMSKYSMAKSEQSYQWEKQGLPSMLTTTSNSKMVRPTANRCKATMRKSKRQRLPQLRCQRHFIQVRKCHFCRSLPYREIWSSKEKYGNRPHRQQRSLRKRKSSIRYPYRKQSQQAGNCPKPLLAKILALHSECRHSKTQSGKKQRRNYSRCQISCTQQTKKLAYHQCEIRLYDIRNAGPHHRFTVSNKLVHNCGYGGAVGALKAMGAIDMGLGEQELQPLVDSWRQANPNIVLFWWDVDKAVKSAVKFQEQTETHGIQFTTSKGILFITLPSGRKLSYVKPKMGENKFGGESVTYEGSGTAKRWERLESYGPKFVENIIQAISRDILAYSMRQLSEFKIVGHVHDEVIIECEKDQSLEQIAMLMRKAPNWMPDINLRADGYECLFYQKD*	rep_hall_hmm	common_virus	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0044	shell	direct	high	2882	0.994	GCA_000223295.2_00677
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	52455	52964	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	42763	43272	GCA_000223295_2_4_59	GCA_000223295_2_4_59	-	164720	.	pfam13958	Toxin ToxN, type III toxin-antitoxin system. ToxN acts as a toxin, it is part of a type III toxin-antitoxin system. It acts as a ribosome independent endoribonuclease. It interacts with, and is inhibited by, the RNA antitoxin, ToxI. Three ToxN monomers bind to three ToxI monomers to create a trimeric ToxN-ToxI complex.	MHEMKFYQIDTNYLNILRQIDGRVPHNKEFIGRKGKSRPYIGVMLSIDNVDYFVPLSSKKKRSSFVVMPIYDDNDEQIATLMLNNMLPVPPKHRKLLNMDGVRITDPKYFDLLMNELNFLRPRRQAIKSRCTIIRSVKVEGKNKPQINEKTKEFCLNLLELEEAYKENE*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0045	shell	direct	high	509	0.998	GCA_000223295.2_00678
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	53170	53766	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	43478	44074	GCA_000223295_2_4_60	GCA_000223295_2_4_60	-	164720	.	.	hypothetical protein	MTNKDKIYNECQKQECSLEVGLLEGQVLAPMLVENQQVIEDMRLKRETLRSWMPAKQLNVYVLVAFIPVFPEEYDQTERIYKDAVENFLNEFRTRKSKNIEEIISYESWIDMDESTLYSSTEELEEFMFAEMLQDLLEKVRQVDKDLYDITLGLLAKEFDESIEDVFARIGVKRSTGFYRLPKARALVAALLKELNPK*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0046	shell	direct	high	596	0.998	GCA_000223295.2_00679
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	54199	54663	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	44507	44971	GCA_000223295_2_4_61	GCA_000223295_2_4_61	+	164720	.	.	hypothetical protein	MDFPTYFRILKKYLGDGATIPEFFRELIEMITEDDAEEIISASGITSEKTDNTLVSYAKRSFSKKMANQLLYRVNSANMTESIESRPDETIQLLTNEFNSYYPDITAENASQRIPEIFVDFIREKAGMGISTTAQKATFVNQSNQLKNIMDNSC*	.	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0047	shell	direct	high	464	0.998	GCA_000223295.2_00680
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	54657	55316	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	44965	45624	GCA_000223295_2_4_62	GCA_000223295_2_4_62	+	164720	.	pfam20277	hypothetical protein	MLAESNNCCAFPGCDKSLILTRGDLASENYEVSAIEKDKDAEPLNLIALCPDCFLTYQAESRKKIVTALKNVKKILVSAHNSQQSISDMKLDSGIVSVLTSLNKLKFDEYDISYDPKQLTDKISPEKNRMLYQMVKNQVIDNYLTIQKIIINLDKQGRIDYEEIQYQMRSMYKKLKAAKHDNLTIFNTISEKLHKATLQDIYFCQMIVSYFIQKCEVLE*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0048	shell	direct	high	659	0.998	GCA_000223295.2_00681
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	55316	55540	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	45624	45848	GCA_000223295_2_4_63	GCA_000223295_2_4_63	+	164720	.	pfam20292	hypothetical protein	MQLPNKLYSYQKSTLAYLPRVLNEIKSGNSNVKDIFHAVSKDLEDPTDFLSIMDCLYALNAIEMSNEGEVKLCL*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0049	shell	direct	high	224	0.996	GCA_000223295.2_00682
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	56193	57188	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	46501	47496	GCA_000223295_2_4_64	GCA_000223295_2_4_64	+	164720	.	PF10088.9	Uncharacterised protein conserved in bacteria (DUF2326)	MEYDLSHLQDTQQDKIDSDDIEKNQQKIQLRNTKLELENSLRDKQRRLKLLDISIEFGLYPTESDLTELQQYFPDTNLKKLYEVEAYHKKLANILDSEFSIERESLIAEIDELESQLTILNQELQELGNIPNLSSEYLENYSKLTATINALKEQNEAYLKESSLSKERSEADADLKRSTEDILLDLEVKINSKIREFNNTLYPDIRKAPQINLKAHNSYSFHTPDDDGTGTKFKGMILYDLAILYLTHLPALAHDSLLLSNISYQATEALLKLYDQSKSLNKQVFLAFDKASSYSPEANKLLSENIVLRLSSNGNELYGISWNKGENSDEV*	hhsuite_tools	hypothetical_protein	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0050	shell	direct	moderate	845	0.848	GCA_000223295.2_00684
GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote	cenote	CDS	57136	57387	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C1	47444	47695	GCA_000223295_2_4_65	GCA_000223295_2_4_65	+	164720	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MNFMVFHGTKEKTQMKFSYNKLWKLLIDKGWTKTKLRQEAGISSSSLAKLGKGENITTDILLKICIVLDCQIEDIVEIVDNNT*	mmseqs_cdd	nonviral_gene	C1	47695	9693	57388	GCA_000223295.2|AFUP01000006.1@region_9694_57388@tool_cenote_CDS_0051	shell	direct	moderate	209	0.829	GCA_000223295.2_00685
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	100050	100655	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	1	606	GCA_000223295_2_4_113	GCA_000223295_2_4_113	-	164720	.	cd03820	amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of  galactose alpha-1,6 linkages in amylovoran.	MEAIANPLPRYINISNIEDIFDKSTISFVGRLDPVKQIDHIILAFSKIQQCFPDVTLEIYGEGSERQKLEALINSLSLEEFVKLKGRTSKVLEVYKKSYFTLLTSKSEAFPMSVVESIIAGTPAITYNCSQGVEEIQSATPELLVNDSVEELADKMKFYLQNPHLLEGLALKGREHIIDSYSEDKILNQWYRLFEELDKEK*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0001	shell	direct	high	605	0.998	GCA_000223295.2_00731
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	100639	101193	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	590	1144	GCA_000223295_2_4_114	GCA_000223295_2_4_114	-	164720	.	.	hypothetical protein	MNRDIIFVTHHLGGLGGVQRVVDQLAESFGTDGNRVTVFGCGVQAGESYQKTSKNYEEVLLYSQDIFFQKPWIFFQEKFINKKLEKNLIQVLDKAKDPIVILANPIVYLLMEKVIKSYSNQAIFIGQMHSSADFVFDSKGLYSIYPYIIKHKYPKLDKILFLSSDYSKKLVKPIIYLLKNGSNC*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0002	shell	direct	high	554	0.998	GCA_000223295.2_00732
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	101260	101664	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	1211	1615	GCA_000223295_2_4_115	GCA_000223295_2_4_115	-	164720	.	PF03023.14	Lipid II flippase MurJ	MSLIILMVRPLITQMAILWNQEKYAEFSLIVKKLLFYLFIGGIVITVVAYFVGTPILSLVFGVALSQYTLPFAILIFAGVLYALAIVFENILTIIRKQHLLVGLYIILLIITKLVTEPFIYQKGMLGATISFLL*	hhsuite_tools	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0003	shell	direct	high	404	0.998	GCA_000223295.2_00733
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	101661	102464	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	1612	2415	GCA_000223295_2_4_116	GCA_000223295_2_4_116	-	164720	.	4LZ9_A	BH2163 protein	MKIKTNPSAKEIYFWNLLGNLAASGVSVLYLLIVTRLTSAKVADQFSLANSIGTLWIVIGLFQVRNYQGTDVNQKHSFIGYFQTRLITILAMLVTLYPYLYIIGEGRYSFETILLTFLMIFYRMWDAVSDLFQGLFQQRERMDIAGKTMFYRYSTSAVVLFLSILLSKSVIVGLFSLVIWNGLVIIFYETSFLKYFETIHWKELFSSNYKKDIKDIFLACWPLFVNGFILLYILNEPKIIIEKGLNQGVLQTGMQRDFNILFMPVFL*	hhsuite_tools	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0004	shell	direct	high	803	0.999	GCA_000223295.2_00734
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	102565	102702	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	2516	2653	GCA_000223295_2_4_117	GCA_000223295_2_4_117	+	164720	.	.	hypothetical protein	MTNKKIKLTADTIPNALAIASAKLGKMLNTNRIKEKNTQNIASLI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0005	shell	direct	high	138	1.0	GCA_000223295.2_00735
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	102796	103491	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	2747	3442	GCA_000223295_2_4_118	GCA_000223295_2_4_118	-	164720	.	cd04179	DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	MKSSDLLIIIPAYNEEGSIENVVKNIILNYSQYDYVIINDGSKDRTSAICHVNGYNIVDLPVNLGLAGAFQTGLQYAYEQGYKKAVQFDADGQHLPEYISVLEAKMNEGYEMVIGSRFVTEKRETSLRMMGNILISAAIKLTTGKTINDPTSGMRMFSEGLIKEFALNINYGPEPDTVSYLIRHGVKVAEAQVRMEERQAGESYLTLSRSIQYMTHMFVSILIIQNFRKRG*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0006	shell	direct	high	695	0.999	GCA_000223295.2_00736
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	103819	104304	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	3770	4255	GCA_000223295_2_4_119	GCA_000223295_2_4_119	-	164720	.	2PRX_B	Thioesterase superfamily protein	MTLETKNIAIQDTYGDRFQHCWGCGPKNESGLHLKTYPSLDGTSCISKITPALQYTGGVPANLFGGMIAMIFDCHGTASAAWFAHQNKGLDLTEKTVIGRFITARLEVDYKSPTPIDEEITVVSRLEELGERKVIVTMEMIVADQVRAKAKMVAVAVKDNM*	hhsuite_tools	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0007	persistent	direct	high	485	0.998	GCA_000223295.2_00737
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	104857	105099	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	4808	5050	GCA_000223295_2_4_120	GCA_000223295_2_4_120	-	164720	.	.	hypothetical protein	MYHAIHLIDNTDFLSTLDNPKSYNDAKGGNDKFEIWRDVYQQDYVTNGVLEANIKPFEIGQAKSSIADLKEIAHDEVQKI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0008	shell	direct	high	242	0.996	GCA_000223295.2_00738
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	105596	106213	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	5547	6164	GCA_000223295_2_4_121	GCA_000223295_2_4_121	-	164720	.	4U8F_B	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	MRIGVIQASSQATKNQIIYDAVLKYAPKKSEVINFGCTMEENEKYSYIEISILVGILLASRTVDFVVTGCSSGQGMLLACNSMPDVICGYAPTPKDAYLFAQINSGNAISLPLGEDYTWSGTENLEKTIETLFSESFGQGYPKSEAERKIRDAEKLKEIRRIGQIQFEEFVNILDISFLESIKRKQDVIQNVKAYGKKEIADLMK*	hhsuite_tools	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0009	shell	direct	high	617	0.998	GCA_000223295.2_00739
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	106240	106560	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	6191	6511	GCA_000223295_2_4_122	GCA_000223295_2_4_122	-	164720	.	COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family [Transcription]. 	MASSKEYLNFILEQLSDLEEITYRSMMGEYIVYYRGKIVGGIYDDRFLVKPVKSALAYMPNAKYELPYDGAKEMLLVDDVDNKVFLTGLFNSMYDELPAPKLKKKK*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0010	shell	direct	high	320	0.997	GCA_000223295.2_00740
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	106582	106896	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	6533	6847	GCA_000223295_2_4_123	GCA_000223295_2_4_123	-	164720	.	cd07251	uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	MFFDTPGTKFELFPLEQLAKDIDENNPPKGNGFSGITLAYNVEHKEDVDAVIAIVRKAGGKIIKEPQEVFWGGYHAYFSDLDGYCWEVAWGPNFKFDENGLLKF*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0011	shell	direct	high	314	0.997	GCA_000223295.2_00741
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	107036	107653	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	6987	7604	GCA_000223295_2_4_124	GCA_000223295_2_4_124	-	164720	.	COG4335	3-methyladenine DNA glycosylase AlkC [Replication, recombination and repair]. 	MKEYIASLEKEFSLIENGFKEEEKRAFADYKSNDNEHSKKMAFLAYKSNVYQVRMYGVFLFGYLSEQDDILAFMRDEVSKDDNWRVQEVLAKSFDEFCKKIGYEKALPVIDEWLKNNNPNTRRAVTEGLRIWTSRPYFKENPNEAIRRIAALKDDSSEYVRKSVGNSLRDISKKFPELIKEELDGWDINSKDIKQVYKLASKLIV*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0012	shell	direct	high	617	0.998	GCA_000223295.2_00743
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	107836	108153	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	7787	8104	GCA_000223295_2_4_125	GCA_000223295_2_4_125	-	164720	.	PFAM:PF11112.7	excisionase	MRQDSGSAFLLYLQFDFIRSLEYTITNECNCKIIYGEIMMEYLSIKQTSEKWGITVRRIQVLCTEGRIPGATKIGSYWAIPTDAEKPNDKRIKSGKYIKKGDING*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0013	shell	direct	moderate	204	0.642	GCA_000223295.2_00745
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	108165	108332	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	8116	8283	GCA_000223295_2_4_126	GCA_000223295_2_4_126	-	164720	.	.	hypothetical protein	MKKRIEELTDFLKGENHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEVVR*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0014	shell	direct	high	167	0.994	GCA_000223295.2_00746
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	108329	109735	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	8280	9686	GCA_000223295_2_4_127	GCA_000223295_2_4_127	-	164720	.	PDB:4BQQ_A	Integrase	MNENVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNKEWELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRKLKEKNIAIIFEKENINTLEASGELLLTIMASLAQQESASLSQNIKLGLQFRYQEGKVQPNHEHFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWHLSTIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLVQEEMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCTRVEHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKLNGILKGKQKELVKLAHAKKDYTALADEIDILRDKKKSFRYKEQKRKV*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0015	shell	direct	high	1406	0.999	GCA_000223295.2_00747
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	109728	110180	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	9679	10131	GCA_000223295_2_4_128	GCA_000223295_2_4_128	-	164720	.	PDB:4BQQ_A	Integrase	MWAEFNRKVGKDMTHTPYGYRIENGIAVVDEVDAERIKALYQEYIDCKSMRAATKKAGIDKTHSVIGRILKNKVYLGTVYYPQIIDEDIFAKAQEIREHNVRSQNRIGIYRPHPKAEIGAFKIRKTEEKYKDPYKQAEYAYSQILEVANE*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0016	shell	direct	high	452	0.998	GCA_000223295.2_00748
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	110141	111706	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	10092	11657	GCA_000223295_2_4_129	GCA_000223295_2_4_129	-	164720	.	PDB:4BQQ_A	Integrase	MARITKIETTKSFVKERKIRVAAFTRVSTKSEEQLLSLEIQKEHYESYINANSSWEYAGLYYDEGISGTKIEKREGLLALLKDCEDGKIDRVITKSISRFSRNTTDCLEMVRKLTSLKVFLFFEKENIDTEHMSSELMLSILSSIAESESKSISQNSKWSIKNHFKAGTFIISYPPYGYENKDGKMNIVPKEADIVKEIFTMTINGMGTHLIARELNNRSIPSKKGDKWHGSTVRGILQNEKYTGDAIFQKTYTDDNYNRHINYGEENMYLYKNHHEPIISHEIFDKVAEVIKQRGREKSIEKGTGKYQSRYVFSGKIYCGECGATFKRRQHYKPSGDYVAWCCNRHITDKNACSMMYIRDEDIKTTFLRMIRKLQTVHDQVLKPFVMSLKGTNNKQRLKQVLALEEQIEKNAEQATVLTNLMSSGYIEPEVFHAENNQLTLEADRLARNKQLIVKSINGDLSHLDEAQKLLRFTSKKEVITEFNDALFLEYVDTIKVNNRNEITFALKCGLNLTERLVKI*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0017	shell	direct	high	1565	0.999	GCA_000223295.2_00749
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	111766	112092	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	11717	12043	GCA_000223295_2_4_130	GCA_000223295_2_4_130	-	164720	.	pfam20612	hypothetical protein	MSASVDIAIRHFFPMEIRIENTAVINVISMTDLEVRRMHVTNSIPSSIDVSARKMTKEAMRKDFEYEIAQKLTQSLLEQGLISTEEYNKIKVLNIEKFSPFYKDLMDI*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0018	cloud	direct	high	326	0.997	GCA_000223295.2_00750
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	112108	112377	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	12059	12328	GCA_000223295_2_4_131	GCA_000223295_2_4_131	-	164720	.	PFAM:PF04936.11	DNA-binding-protein	MNQDEKARIIELREEGLSYTEIAKRMDISKNTIKSFCRRNGITETKKIREIWAFVNFAGSQFLSLLEERKKDSAQIAVETNGGIAIWMR*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0019	cloud	direct	high	269	0.996	GCA_000223295.2_00751
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	112559	113545	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	12510	13496	GCA_000223295_2_4_132	GCA_000223295_2_4_132	-	164720	.	PFAM:PF05382.12	peptidoglycan-hydrolase	MSNSSLVNMTMLSPNHSGHRNQPITKIAIHHTAGAISAATIGQIFRPTSRQAYCNYGIGNDNKIVLCVDEANRSWCTSSSWCDNRAVTIEVANSANGGNWPVSDRTLATLIDLVTDICRRNGIRNCTYTGGKDGVLQKHEWYANTNCPGPYLGSKFSYIASEVNKRLSGNSSSSGGTSTSSLYRVRKSWSDVKSQKGAFRDFDNAKKCANANAGYKVFDASGNEVYPNKVTISKSVDTLAHEVLAGNWGNGSDRANRLRAAGYDYDTVQNRVNEILSGTNSNPNRKPIDILAREVIIGDWGNGQDRVNRLTSAGYDYNAVQKRVNETL*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0020	shell	direct	high	986	0.999	GCA_000223295.2_00752
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	113538	113957	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	13489	13908	GCA_000223295_2_4_133	GCA_000223295_2_4_133	-	164720	.	PFAM:PF05105.11	Bacteriophage-holin	MKEFWSMIQLTFAGVGGWLGYFLGGCDGLILALLLFVVIDYITGVMCAITDKKLSSSVGFKGICRKVLIFMLVGIANIIDVQIIKSGSVLRTAVVFFYLSNEGLSLIENAAHLGLPVPDKLKAVLEQLHDKERGVKDHE*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0021	shell	direct	high	419	0.998	GCA_000223295.2_00753
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	113959	114471	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	13910	14422	GCA_000223295_2_4_134	GCA_000223295_2_4_134	-	164720	.	.	hypothetical protein	MAKKFLSKEGLDRFYEKIKSKFALLDSPVFKGRPTVETPEFERTTESKVIVNKEYVSKMYDLIVQYIESEKPAFHIQLNIKPNEWKKTEGVFKFERLKEKMQNVELDKVSIFVRIDTLRLEPKKLAGVLKYPLGITNELVIYTTSAPTYELPIIVDLFASMDMTMWLGGN*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0022	shell	direct	high	512	0.998	GCA_000223295.2_00754
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	114453	115073	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	14404	15024	GCA_000223295_2_4_135	GCA_000223295_2_4_135	-	164720	.	.	hypothetical protein	MATKYLDNNGLLYVWKKIKDTFVKKTELDEVKTAIPKNVTDLLDAGNYALKSSVPTKVENLEDAGDYAKKSEIPHRIDGMEGIEAYAKVASIPKKVVELEDYADFVKKAELTEEVKGLIGNVKSIEFSVVEELPASGEKATIYLVSNAKSDNDAYDEFIWLNDKLEKIGTTSVDLSGYLKAVDISSITNEEIDVFLCRCSVWLKSF*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0023	shell	direct	high	620	0.998	GCA_000223295.2_00755
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	115088	115300	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	15039	15251	GCA_000223295_2_4_136	GCA_000223295_2_4_136	-	164720	.	.	hypothetical protein	MAEINASFKRDAPMDTSFETIIRVTDSGSSDYNSLVNQPKINEVKLIGNRSLEELGLNSITNIELEELLK*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0024	shell	direct	high	212	0.995	GCA_000223295.2_00756
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	115300	115596	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	15251	15547	GCA_000223295_2_4_137	GCA_000223295_2_4_137	-	164720	.	.	hypothetical protein	MHRGTTPINIFRTDVDLTNASVLFITYKQNGKVILEKSIDEVKIQNNIVSVYLSQKDTLLFMEGIVTIQIRAKFFDGSAIASSLIRTSTYEILKDGEI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0025	shell	direct	high	296	0.997	GCA_000223295.2_00757
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	115608	115889	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	15559	15840	GCA_000223295_2_4_138	GCA_000223295_2_4_138	-	164720	.	.	hypothetical protein	MEKPTINYALAYQKFRGELNSHIAAMQQRIPIPTYMVEGILAGILADVRSAVISENSLEVDAYRENLDKYYENREKELNDEILKLKAKDEEKA*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0026	shell	direct	high	281	0.996	GCA_000223295.2_00758
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	115870	116052	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	15821	16003	GCA_000223295_2_4_139	GCA_000223295_2_4_139	-	164720	.	.	hypothetical protein	MPELIINTNDIIINEGTLKKDVVKKQKAKEDKNILLLEEINRKLDLILKDREEGHGETNY*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0027	shell	direct	high	182	0.995	GCA_000223295.2_00759
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	116062	117150	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	16013	17101	GCA_000223295_2_4_140	GCA_000223295_2_4_140	-	164720	.	PFAM:PF07902.10	tail-protein	MKKQGLELKFNASSRTESEYYDWVEIFYEFDGKIYVFPRYGGTSIAGQIVFIPSDKFWLYWRCDGSGHDYYGFKIDYIKKVDSYKELIGDVSSLPTDAGEIINLSGSNYPESEHSPYKDGTRMLWKYSSSESISSSISFEWVRVKDKDIQAAKEKAETAISKISVVEGSISSMVKKGEFGTFMRQNYNSFLLGFNSASSYVQITAGEIGLYNGTIDSSHKRASFDENGNHFYRDGKYIGKIGTNVWSANSSHKGLVFDLDSEGKYMAFSQQEYTNSGSYTTMLCFSRSGSIYSDYGIHLGCNFYAHGFKIVDPQWRDGFGVNATINFVQILSMNSNGTVASWGPNGRMVFKDGILMDLNYYE*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0028	shell	direct	high	1088	0.999	GCA_000223295.2_00760
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	117198	118871	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	17149	18822	GCA_000223295_2_4_141	GCA_000223295_2_4_141	-	164720	.	PDB:3GS9_A	tail-protein	MDGNTIYYPSDGKAVLISSTLNLELNTAGSLSFICPPENPYYEKIYNRKSIVSVYRDEKEIFIGEVREQTKDLRGNKKVQCVGLLSYLADSIQPQMEYHDQTPYQLLSKFLKIHNEQVDDKKKIMLGRVTVTDPNNSLYRFTNYETTMEVIMTKIVDKLGGYLKLRREEELLYLDYLRLEEMGKATEQSIEFGVNLLDYTEDLSAEDITTAIIPLGKEIDGEENDILKKYTDIQSVNDGKNYLVSKEAKDEFGWVCRVIRWDDVTVPANLLRKGAAWLKDNQFEMVELALSAVDLSEFGIPTETIECGDRVRCIAYPFGMDRVFPVMKQTIPLQKPGEIKVVLGSNQAKGYIQSSADAVRHLKEENLVTRKIDNERVQSAIDNLKAQMNISEGGYKLTEYDSSGRWLRDLYMDTPDKNTATKVLQVNMNGIGGSHNGYEGPYAVGMTLDGMIYGNRIMSHSIDAEKLSVSYTSQVEKQILDSKTEAISDTDRKLKSYYTINEVNTRLSATDRKIEASVETVNQMLEQKNGNYYGTYEPNSSRAPANSWNSDVVRKTM*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0029	shell	direct	high	1673	0.999	GCA_000223295.2_00761
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	118982	119551	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	18933	19502	GCA_000223295_2_4_142	GCA_000223295_2_4_142	-	164720	.	PDB:2X8K_C	Distal-Tail-Protein	MKIGEFHSYKDFGLVPTSKPIINLPSPKLEYLDIPGMQGELDITESLGGEVLYEMRTGSFEFLVSDPEKWREVYGKLLSTVHGKKTNIVLDTEKDYVYQGRMWVSEFKSDKNYSLITLDYKLEPYKYKISDLVNGVEIIHKLEGVVITNSKTVTIPFDSDMSIVPEFNNKTENIVTLNFKGKKFSIKKG*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0030	shell	direct	high	569	0.998	GCA_000223295.2_00762
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	119563	122376	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	19514	22327	GCA_000223295_2_4_143	GCA_000223295_2_4_143	-	164720	.	UniProtKB:A0A0R1V141_9LACO	Minor-tail-protein-	MANRIKGITVEIGGDTTGLDKALKGVNSTIKNTQSQLRDVNRLLKLDPSNAKLLAQKQQLLQKEISETSEKLNALKEADKQAKVQLENGELGQDKYDALQREIIETENNLKALQEEAKKVPSALSVSMKEAGDKIKEVGDKTTEVGKGLSTHVTAPIVAIGAASLSAFNEVDKGMDIIVQKTGASGKALKEMQDSMKNLATSIPTDFETAGAAIGEVNTRFGLTGQKLEELSGKFIKFAQLNNIDVSSAIDNTQKVISAFGLKAEDAGALLDTMNAVGQRTGISMDTLAKSMVTNSAALQQLGFSASDAANFLGNVEMSGADTSQVMTGLSKALSNATANGKPMKEALKDIQDSMVNAKSDTEGLDAAIDLFGKKAGPAIYQACKNGSLSFEELGTSLKDNLGNVDSTFNETLDPIDKFKTSMNSLKIVGADVGNSLMTVLQPMLEKFAEIMKSLNEKWNSLSPGMQQAIVKIALIAATVGPVLVVIGKVITAVGTITSALGGLIGLLGGTATATTAVGVAGGASAAGTAAAGTAAGGAAVGFGALNVSLLPIIAIIAAVVAIIAIIKNWGAITEWFKGLWEKISTAIMSIWQGISDFFKGIWEGLVSIFTTVWETIKNIVTVALMFIVELIKGYFELITLPFRFIWENCKETIMTVWEAIKTVVSTVLNTISQVITSIMNAIKTVIITVWNAIKVVITTVINAILSVITTIFNNIKNVVTTVWNAIKSVISMVVDGIKNKISAVFDAVSSTVSSIFNGIKNTAVSIWNGIKSAIVTPIEEAKNKVKSMVDAIKGFFSSIRLKLPHIKLPHFSISGHFSLAPPSVPHLSIDWYKKAMNKPMLLNGATIFGSKGGHLLGGGEAGPEVIMGLDTLSNMTAGANGELLSVMTRVLAIMDRYFPQFAQTSIVLDSGELVGGIAPKIDMELYKLQNRKARGW*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0031	shell	direct	high	2813	1.0	GCA_000223295.2_00763
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	122632	122910	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	22583	22861	GCA_000223295_2_4_144	GCA_000223295_2_4_144	-	164720	.	pfam11208	Protein of unknown function (DUF2992). This bacterial family of proteins has no known function. However, the cis-regulatory yjdF motif, just upstream from the gene encoding the proteins for this family, is a small non-coding RNA, Rfam:RF01764. The yjdF motif is found in many Firmicutes, including Bacillus subtilis. In most cases, it resides in potential 5' UTRs of homologs of the yjdF gene whose function is unknown. However, in Streptococcus thermophilus, a yjdF RNA motif is associated with an operon whose protein products synthesize nicotinamide adenine dinucleotide (NAD+). Also, the S. thermophilus yjdF RNA lacks typical yjdF motif consensus features downstream of and including the P4 stem. Thus, if yjdF RNAs are riboswitch aptamers, the S. thermophilus RNAs might sense a distinct compound that structurally resembles the ligand bound by other yjdF RNAs. On the ohter hand, perhaps these RNAs have an alternative solution forming a similar binding site, as is observed with some SAM riboswitches.	MNGGIIMYKISGKLTVYFENPFWVAVFEHIEDGLLSVSKVTLGAEPKDYEIYEFVLNHYNDLQFSSAVATVVKEEKKNHKRVQRELKNKQRK*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0032	shell	direct	moderate	261	0.935	GCA_000223295.2_00764
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	123100	123264	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	23051	23215	GCA_000223295_2_4_145	GCA_000223295_2_4_145	-	164720	.	.	hypothetical protein	MTTALFILRCVEIGINISELDLLTIGMVLDIWTEKSNDGVKYSKVAGQAEFDKF*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0033	shell	direct	high	164	0.994	GCA_000223295.2_00766
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	123272	123688	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	23223	23639	GCA_000223295_2_4_146	GCA_000223295_2_4_146	-	164720	.	PFAM:PF12363.7	Tail-assembly-chaperone	MCMFHRLKVKHLNLQDIKEDFYARKTVRVGEVDVKFRSSATIPRLYRIKFKRDIFKDLSKLEKTFKASEGSFEIDDLEIFENVAYIMAYHADRSIAGNIDDWLDQFEMFSIYEILPEILELWGANLETEVQSKKTSKK*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0034	shell	direct	moderate	393	0.942	GCA_000223295.2_00767
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	123636	124226	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	23587	24177	GCA_000223295_2_4_147	GCA_000223295_2_4_147	-	164720	.	PFAM:PF04630.11	tail-tube-protein	MGNKVKYNLKNVHAAKLKKDTSGAFTYENPKAIPGAVSISLDAEGESSPFYADGIVYFRSTANNGYSGDLEIALIPEWFRTEILKEELDRNGVLVEKANISETEKFALLFEFDGDINAIRHVLYNCSASRPSIESETKEDTIEPGTETLSLTADPREDGLVKSRTGDTTSADTYANWYKNVYVPQAKGEAPKPTGH*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0035	shell	direct	high	590	0.998	GCA_000223295.2_00768
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	124216	124548	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	24167	24499	GCA_000223295_2_4_148	GCA_000223295_2_4_148	-	164720	.	PFAM:PF05657.10	tail-completion-protein	MDKLLEIIEKIGFPSAYHHFAEGESPNPPFLIYILPASDNFSADGRVYFKANEVHIEVYTDYKNLDIEKKVEVVLDEYGIFYNKSEVYIESEKLYEVLYIFEMEVKTNGK*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0036	shell	direct	high	332	0.997	GCA_000223295.2_00769
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	124541	124921	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	24492	24872	GCA_000223295_2_4_149	GCA_000223295_2_4_149	-	164720	.	PFAM:PF04883.11	putative-tail-component	MSNVKIDSLSSEVMKELEKYADVTTEKVKKSVQNAGKTVRDEISRNAPSDTGKYSKSWKIKTVRETSNSLELVVHSKNRYQLTHLLEFGHAKCGGGRVSARPHIVNAEEKAIKVFEEEIKEAISNG*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0037	shell	direct	high	380	0.997	GCA_000223295.2_00770
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	124918	125250	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	24869	25201	GCA_000223295_2_4_150	GCA_000223295_2_4_150	-	164720	.	PDB:2KZ4_A	Head-tail-adaptor	MKVSLLNERITIEKSKIEVDKIGNHKNVWSKYYSCYATISSESPQEETSSGAIWDESKIDFTIRYSREVADISSIGFRVIFHNSIYEIRGIDHMNYKKKSMKLHCRRVER*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0038	shell	direct	high	332	0.997	GCA_000223295.2_00771
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	125250	125528	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	25201	25479	GCA_000223295_2_4_151	GCA_000223295_2_4_151	-	164720	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MVVSLEEMKNYLRVDTSEDDNLISTLIKSAEKMCLAIARKEEEEIIKENFDEYKVAVLYGAAYLYEHREEADHHELTITLRSMLFGARKAGF*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0039	shell	direct	high	278	0.996	GCA_000223295.2_00772
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	125551	126726	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	25502	26677	GCA_000223295_2_4_152	GCA_000223295_2_4_152	-	164720	.	PFAM:PF06673.10	Major-Capsid-protein	MSKILEMIEKRNKAWEGAKAFLDSKRDKDGLISEEDALVYDEMEKKVHNFSLEIERLQKMEELDKELSKPMSDAIVNRPMKVEEREEKKGRARDEYKNAMLNALRTNFKRVENVLQEGVDADGGYLVPDEYDDRLIETLEEENIMRSLGTTITTSGQHKINIAMSDPAAAWIEEGGALNFGDSKFAQVLLDAHKLHVAIKVTEELLYDNAFKLEDHILTAFGKALANAEEDAFLNGDGTGKPTGIFNKTNGGTYLKDITAVKSDDLIDLIHALKRPYRKNATFIMNDKTIAQVRKLKDNNGAYIWQPSYQEGEPDRILGYPVKTSAFAPENAIAFGDFSYYNIGDRGARSFKELTELFAGNGMIGFVAKERVDGKLVLKEAVQILPIKATS*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0040	shell	direct	high	1175	0.999	GCA_000223295.2_00773
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	126750	127439	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	26701	27390	GCA_000223295_2_4_153	GCA_000223295_2_4_153	-	164720	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MKNQNEEEVIERILFLNGTIAEESWFDDDVTPQIFKDELNKGNGNITVWINSPGGDCVAAAQIYNMLIDYKGDVTVKIDGIAASAASVIAMAGTKVLMSPVSMLMIHNPMTIAFGNKGEMEKAIDMLDEVKESIINAYEIKTGLSRAKLSHLMDSETWMDANKAVELGFADDILKRSEANDMEIPRISMMYQEAQVVNSLMDKLATKCKIENKETNTGVKADSLMERLF*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0041	shell	direct	high	689	0.999	GCA_000223295.2_00774
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	127390	128415	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	27341	28366	GCA_000223295_2_4_154	GCA_000223295_2_4_154	-	164720	.	PFAM:PF06074.12	Portal	MMTHLLLWGNAYAQIIRNGKGEVLGLYPLMPDRMKVDRDDKGKICYEYFVSDSDAGTEKQGIVKLNESDVLHIPGLGFDGLVGYSPIAMAKNAIGMAIATEEYGAKFFANGATPSGILEYPGTVKDPEAMRESWSKGFSGGNSHKIAILEEGMKYTPISISPNEAQFLETRKFQINEIARIFRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVARWEQSIVRRLFNEEEKKKYYVKFNVDGLLRGDYQSRMNGYAIGRQNGWMSAKDIRELENLDRIPSEDGGDLYLINGNMLTLNRAGAFAGDEGEEEEPNEEVLEVEESSNEKPKRRGSDRTHPIP*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0042	shell	direct	high	1025	0.999	GCA_000223295.2_00775
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	128412	128735	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	28363	28686	GCA_000223295_2_4_155	GCA_000223295_2_4_155	-	164720	.	PFAM:PF06074.12	Portal	MGILSSLFTLKGTRKSRDKPTNRTNGSAYSFLMGGSSSGRRVNERSAMQMTAVYSCVRILSEAVASLPLHVYLRTDTGTEKAIEHPLYKVLHDEPNPEMTSFVLEKL*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0043	shell	direct	high	323	0.997	GCA_000223295.2_00776
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	128837	129190	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	28788	29141	GCA_000223295_2_4_156	GCA_000223295_2_4_156	-	164720	.	PF07739.13	TipAS antibiotic-recognition domain	MQNKLKSLGEIQRNLKSLRKTKNRSDEEIKMINQQLMMIFAEFGKIKLEKYESEEAQNLVKKLQNFITDNFYNCSYEILSGLGKMYASGGDFTKNIDEFAGEGTAVFVNKAIEYYCK*	hhsuite_tools	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0044	shell	direct	moderate	264	0.746	GCA_000223295.2_00777
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	129281	129559	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	29232	29510	GCA_000223295_2_4_157	GCA_000223295_2_4_157	-	164720	.	cd01106	Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an  N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	MKTIKEVSKIAGISVRTLQYYDNIGLLKPTAHSDAGYRLYSDSELITLQHILLFRELEFPLKEIKEIINSENFDKDIALEQQINLLTLKKNA*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0045	shell	direct	high	278	0.996	GCA_000223295.2_00779
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	129717	131267	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	29668	31218	GCA_000223295_2_4_158	GCA_000223295_2_4_158	-	164720	.	PDB:6Z6D_A	Large-Terminase	MRLFLEGGVALAKYKTTKFKEKDSVYNKEHADYAVNFIECLSHTKGTWAGKPFKLLPWQEQIIRDLFGVIKPNGYRQFNTAYIEIPKKMGKSELAAAVALLLCCGDGEERAEVYGCAADRQQATIVFDVAADMVRMCPALNKRVKILASQKRIVFQPTNSFYQVLSAEAYSKHGFNIHGVVFDELHTQPNRKLFDVMTKGSGDARTQPLYFLITTAGTDTHSICYETHQKAKDILEGRKIDPTFYPVIYGADEGDDWTDPKVWKKVNPSLGVTVGIDKVKAACESAKQNPGEENSFRQLRLNQWVKQAIRWMPMEKWDSCSFAVNEDELEGRVCYGGLDLSSTTDITAFVLVFPPTDEEDKFVILPYFWLPEETLELRVKRDHVPYDIWERQGYIQTTEGNVVHYGYIESFIEKLGERFNIREIAFDRWGAVQMVQNLENMGFTVVPFGQGFKDMSPPTKELMKLTLEQKIAHGGHPVLRWNMDNIFIRTDPAGNIKADKEKSTEKLMVRLRQSWH*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0046	shell	direct	moderate	1521	0.981	GCA_000223295.2_00780
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	131406	131747	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	31357	31698	GCA_000223295_2_4_159	GCA_000223295_2_4_159	-	164720	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MLLCAFRVIYIVLPKAKEIKKMNKMTELAKEYRIPTQATPEDLETRWGKVIIFGDRVILVGHYYHPDGNCYFAAVYEFLDDDHTCEGFIGLREVSDKRFEDDGHAIEWALNQN*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0047	shell	direct	moderate	279	0.816	GCA_000223295.2_00781
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	131772	131975	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	31723	31926	GCA_000223295_2_4_160	GCA_000223295_2_4_160	-	164720	.	PF16468.5	Domain of unknown function (DUF5049)	MVKISAGGFQMNDKIKEQILVIRNTGITNMFDLIAVQRIAFEMGFYELVDFLETDRKAYVDFIIYGK*	hhsuite_tools	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0048	shell	direct	moderate	174	0.853	GCA_000223295.2_00782
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	131935	132180	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	31886	32131	GCA_000223295_2_4_161	GCA_000223295_2_4_161	-	164720	.	PF14192.6	Domain of unknown function (DUF4314)	MEVIKMRFPSRDIVEGIRKRYPIGTRVELVLMADIQAPPVGTKGTVRGVDDIGSIMVSWDNGSSLSVAYGEDFCRRISDER*	hhsuite_tools	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0049	shell	direct	moderate	231	0.939	GCA_000223295.2_00783
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	132149	132799	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	32100	32750	GCA_000223295_2_4_162	GCA_000223295_2_4_162	-	164720	.	PFAM:PF12224.7	amidoligase-enzyme	MELKYEMKGAERKKLVQAIEDLTGYKAKYLGMPSAAYEIGAFTVSKEGTVTSKTDENLEDLEKILAGDYGIDLPQRETVATQGLTVAIPRDKVNLSKLEKIFENKGDLIKKALGVTSLEIEEDEEKVSFPWFENIDNEHLMTYTKFIAALCKLSINAKRINESSKEVINEKYAFRCFLLRLGFIGYEFKQDRKILLEKLSGSSAFRNGGHKDEISK*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0050	shell	direct	high	650	0.998	GCA_000223295.2_00784
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	132835	134352	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	32786	34303	GCA_000223295_2_4_163	GCA_000223295_2_4_163	-	164720	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MSKELTLGSLFDGSGGFPLGAKLLGIKPIWASEIESFPIRVTTKRMPEVKHLGDVSEIKGYEIEPVNIITFGSPCQDMSIAGKRAGLNGSRSNLFYEAIRIIKEMRERTNGTKPRYIIWENVPGAFSSNKGEDFKKVLKEICEIKGYQIDAPRPNRWQNAGLILADDFSLAWRVFDTQHWGVPQRRRRIYLVTDFNGESAGKILFESEGMPWHLEKSKCPWKRTTGNSKTCTRKGIENLCLNDQGGQRMDIHENKSGTITASVGNHPPLVFENHGQDTRFKGPIDISNTLGASLGTGGNNQPFVVEDKVDIFDVRITSENTKNHRANIYETDVARTINMGLNSPDANQGGLAIVYSTSKNSHHTEAVENLANTLVASDYKDPPVVNDMEGKKYIVRRLTPKECGRLQGFPDGWCDGLETENPSSEELKFWSEVFETYRRVVTKSTKPKSEKQIRKWLINPHTDSAEYKMWGNGVALPNVCFVLAGIAHFYFEKSTEMTCYLQPLE*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0051	shell	direct	high	1517	0.999	GCA_000223295.2_00785
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	134345	135028	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	34296	34979	GCA_000223295_2_4_164	GCA_000223295_2_4_164	-	164720	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MEDKKANLVVTDPPYNVNYEGSAGKIKNDNMNTDKFYNFLLDAFSNMEKVMADDASIYVFHADTEGLNFRKAFNDAGFYLSGCCIWKKPSLVLGRSPYQWQHEPCLYAWKKKGKHQWYSGRKETTIWEFEKSKKNADHPTMKPIALLAYPITNSSMSNTLILDPFGGSGSTLIACEQTDRSCYTIELDEKFCDVIVKRYIEQVGTNKDVSVLRAGKEYLYNEVTADE*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0052	shell	direct	high	683	0.999	GCA_000223295.2_00786
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	135436	135579	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	35387	35530	GCA_000223295_2_4_165	GCA_000223295_2_4_165	-	164720	.	CDD:cd16403	ParB-like-protein	MGKEMQYYLADINDLIPYIRNARTHSESQIAQIAASIKEFGFYLRYS*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0053	shell	direct	high	143	0.993	GCA_000223295.2_00787
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	135592	136353	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	35543	36304	GCA_000223295_2_4_166	GCA_000223295_2_4_166	-	164720	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MHPDKIADRIAGAIVDLAYKENKNPKIAVEVLIGHSVCHVIIETTEKLYQEPIEKIIHRIAGDVKADILIVPQDVYLTNNQKNKVRCGDNGIFKGMPLTDEQKELSKIAREIYNKYPYDGKYILDETRLIICQSNAKTSELRETYPYAEVNPLGDWTGGTDVDTGATNRKLGSDMADSVTGGGLHGKDLSKADVSVNIYAFLKAQEMGEEVKLCCAIGDREVDGKSYEDIVRLAKEYIDSIGGFEKFAEWGLF*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0054	shell	direct	high	761	0.999	GCA_000223295.2_00788
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	136378	137022	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	36329	36973	GCA_000223295_2_4_167	GCA_000223295_2_4_167	-	164720	.	PFAM:PF05119.11	terminase-small-subunit	MGSHAQKERFKQGIKESKNLRSDNLAKDGTYRGGRRVRAGDKPKPVAEKIQAGEMVKILANDIPDEYYAELESVDLPEGVELEGMDMPKPSEYLSAKQKSGIPLGADRIYKETWQWLKERKCEKLVNKRLIESYSQAFARYIQCEEAISRYGMLGKHPTTGGVIASPFIQMSSQFQKTANLIWYEIYDIVKQNCTEIFEEESNDPMERLLRGGR*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0055	shell	direct	moderate	573	0.888	GCA_000223295.2_00789
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	137543	137788	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	37494	37739	GCA_000223295_2_4_168	GCA_000223295_2_4_168	-	164720	.	PFAM:PF05263.10	transcriptional-regulator	MDLKLQILETIEQLECIDEKLVLNYRYVKGLEWDEISSLLFASERTIFRWHGNALAKLKLPENPINIKSCQLMAVDGSDCQ*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0056	shell	direct	high	245	0.996	GCA_000223295.2_00790
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	138060	138326	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	38011	38277	GCA_000223295_2_4_169	GCA_000223295_2_4_169	-	164720	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MALIHPASAGHGLNLQAGGSTLIWFGLTWSLELYQQTNARLYRQGQDSTVVIHHILTKGTIDEDVMKALKSKKKIQDALIDSVKARLK*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0057	shell	direct	high	266	0.996	GCA_000223295.2_00791
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	138398	138697	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	38349	38648	GCA_000223295_2_4_170	GCA_000223295_2_4_170	-	164720	.	PFAM:PF10665.8	head-closure-knob	MPECLMNEVIVTLSDKEQKLYDSLKQDMVLSLEENEIDAINAAALSNKLLQMSNGAVYNDDKESLHIHDRKLDALEDLIEGANGKPVLVAYWFKHDLEK*	hallmark_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0058	shell	direct	moderate	285	0.95	GCA_000223295.2_00792
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	138742	139401	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	38693	39352	GCA_000223295_2_4_171	GCA_000223295_2_4_171	-	164720	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MKYFPHDYQRYATDFIINNPISAVLLEMGLGKSVISLSAINELMLDYFDVSRTLVIAPLRVANSTWPDEIKKWDHLKHLNYSVVIGSEKERLDALKKPAHIYLINRENVDWLITKSGISWKFDMVVIDELSSFKSYQAKRFKSLLKVRPKIKRIVGLTGTPSSNGLMDLWAEFRLLDMGERLGRYITYYRQNFFVPDKRNQQMIFSYKPRDGAEKRYIV*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0059	shell	direct	high	659	0.998	GCA_000223295.2_00793
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	139382	139483	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	39333	39434	GCA_000223295_2_4_172	GCA_000223295_2_4_172	-	164720	.	.	hypothetical protein	MKRIDDFRKLGFKCFVIDGKNQIGGVIDEILSS*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0060	shell	direct	high	101	0.99	GCA_000223295.2_00794
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	139480	139662	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	39431	39613	GCA_000223295_2_4_173	GCA_000223295_2_4_173	-	164720	.	4QBN_A	Uncharacterized protein	MLEKEIEKSLVKRVKGLGGICLKLVSPSMDGLPDRMVFLSDGKFAFVELKAKGKSQGLYR*	hhsuite_tools	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0061	shell	direct	high	182	0.995	GCA_000223295.2_00795
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	139784	141610	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	39735	41561	GCA_000223295_2_4_174	GCA_000223295_2_4_174	-	164720	.	PFAM:PF04735.11	dsDNA-helicase	MFSYFDDNALDAARFLYGTSTPEVELYEGSRTILDFLLDDSFANLGESIESGNRNNTMSHIAGKLIKRFGDGNEAYEKFMKQADRCDPPLSEDELSTIWNSARKFGNKVSSQVGYISPEKYNLELNLKPEDLSDVGQAVVLAREYKDKLRYSPATDFLVYNGSFWEESQPNAQGIAQELTARQLEEAEVEIQKAITEMNSNGAWALIAAMGPKKASAQFNKEQARSFEKYEQAEVYRKYAIKRRDTKYISAALKEVRPMVQVEQSMLDADEFLLNTPYETINLVTGECLVHKAEDYITKQTTVSLGEEGKDIWLDALNIFFVDDIELISYVQKIVGLASIGKVYVEALIIAYGEGRNGKSTFWNVVSKVLGTYSGNMSADMLTVGCRRNVKPELAEAKGKRLLIAAELEEGMRMNTSNVKQLCSTDEIFAEKKFKSPFSYVPSHTLVLYTNHLPRVGAVDKGTWRRLIVIPFDAKIEGQNDIKNYTEYLFENAGGAILSWIIEGAKQVIKDEYHIDAPKRVQDAIAAYKENNDWMKHFLDECCEIDPTFTEKSGKLYTAYRAYCLRTGEFTRSAGDFYSVLEIENFQKKKTKKGIIVYGLRLKSEFED*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0062	shell	direct	high	1826	0.999	GCA_000223295.2_00796
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	141580	142017	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	41531	41968	GCA_000223295_2_4_175	GCA_000223295_2_4_175	-	164720	.	PFAM:PF04735.11	dsDNA-helicase	MLKCRLSVATCIGNSSNCMYPNSVMVSDRDSFIQAISFDHVAGTFKGNYRSKDNFISSDCIPMDCDNDHSDGEKDWVTPFDVAMAFPGVCFYASYSRNHMKNKGSKSARPRFHVYFPIEEVTDADEYAEYKKRYKQCFHTLMIML*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0063	shell	direct	high	437	0.998	GCA_000223295.2_00797
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	142010	142207	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	41961	42158	GCA_000223295_2_4_176	GCA_000223295_2_4_176	-	164720	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MNDKDTNQREDALFMDIILLGKCQEVWVFGGEITEGMKKELEIAEKRKQVIKYFDSTSMEVEINA*	phrogs_hmm	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0064	shell	direct	high	197	0.995	GCA_000223295.2_00798
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	142373	143047	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	42324	42998	GCA_000223295_2_4_177	GCA_000223295_2_4_177	-	164720	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MKAMIPMNDYGILADKNNTARVDSRFIAQFFEKRHSHVIRDIQSITEPKSGLSKEFTKLNFELSSYKDSTGRKLPCYLLTRDGFTILAMGYTGPKAMKFKELYIKKFNEMEDFITTIISAREMFPILTENIALIHDNPKAYHYSNECDMINRLVLGMSAKQVRELYGIEKGKSIRPYLTSGQMYLIDRLQKIDAGLLISTPDYQARKRQLEWYLTKISKEADYE*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0065	shell	direct	high	674	0.999	GCA_000223295.2_00800
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	143022	143168	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	42973	43119	GCA_000223295_2_4_178	GCA_000223295_2_4_178	-	164720	.	.	hypothetical protein	MTIEEKIAYLETMDKVKDQQIKELQVAVEGLVKSLEGGVSHEGNDSNE*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0066	shell	direct	high	146	0.993	GCA_000223295.2_00801
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	143261	143818	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	43212	43769	GCA_000223295_2_4_179	GCA_000223295_2_4_179	-	164720	.	CDD:cd08642	DNA-Polymerase-I	MGALEMGLEEDELQPLVDAWRSSNPKVTSLWWDVDRAVKTCVKERINTETHGINFSYKSGFLFIELPSGRKLAYVKPRMGENKFGGESVTYEGVGTTKKWERLESYGPKFVENIIQGIARDILVYAMKTLRNCEIVAHVHDEIIIEADKRMSLEVVCEQMGRTPPWASGLILRADGYECEFYKKD*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0067	shell	direct	moderate	543	0.973	GCA_000223295.2_00802
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	143878	144894	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	43829	44845	GCA_000223295_2_4_180	GCA_000223295_2_4_180	-	164720	.	CDD:cd08642	DNA-Polymerase-I	MIWSATLALPMSLEGVGSVLGLDKQKLSEGKSLIKYFCLPCNPTKVNAGRTRNQYFHDEVKWNQFKEYNKRDVEVEMAIQERLSKFKVSEDIWDEFYLDQEINDRGIAVDPVLVESAIRLDLDVKENLMKKLSDITGLENPNSVLQMRQWLSKNGLEMESLGKKEVARELKTASKKLAEVLLLRQQLSKSSVKKYTAMENAACKDNRERGMFRFYGANRTGRFAGRLVQLQNLPQNHLPDLAEARELVRQGNITALELLYEDIPDTLSQLIRTAFVPQSNNKFIVADFSAIEARVLAWLAGEKWRMKVFEEGKDIYCSSASQMFGVTVEKHGVNSQLR*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0068	shell	direct	high	1016	0.999	GCA_000223295.2_00803
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	144957	145247	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	44908	45198	GCA_000223295_2_4_181	GCA_000223295_2_4_181	-	164720	.	CDD:cd08642	DNA-Polymerase-I	MKNISVDIESYSGVNLQKAGVYKYVESNDFEILLFGYSIDGGEVQVVDIAKGEEIPRDILDALTDEEVTKWAFNAQFERVCLSRYLVDKGISLNPF*	rep_hall_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0069	shell	direct	high	290	0.997	GCA_000223295.2_00804
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	145407	145544	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	45358	45495	GCA_000223295_2_4_182	GCA_000223295_2_4_182	-	164720	.	.	hypothetical protein	MQNFMLEVCFGATLGLIIGSWGFMIKCWLDDRKKKKTEEKNNESN*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0070	shell	direct	high	137	0.993	GCA_000223295.2_00806
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	145564	146109	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	45515	46060	GCA_000223295_2_4_183	GCA_000223295_2_4_183	-	164720	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MTNNKTKVITGKDTRLSYFNGWEPKSINGGPEKYSVSVLIPKDDVKTIKAIEEAIDAAIEEGVGKFGGKKPNKAAIKLPLRDGDIERDDEAYKGHYFINANSTSAPQIVDKVVKPILDRSEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRDGEPLGGKVNAADEFTSLEDDDFLA*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0071	shell	direct	high	545	0.998	GCA_000223295.2_00807
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	146111	147304	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	46062	47255	GCA_000223295_2_4_184	GCA_000223295_2_4_184	-	164720	.	pfam10926	Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	MRRESKLTKQKVNCITGAREAGQGHAVLSPSSSHRWLNCTPSAVLELEFENTSSSAAEEGTAAHTFCEHKLKKALYMRSKRPVSDYDSDEMQECTDAYVDYVMEQLEIAKQVCKDPIILIEQKVDFSEYVPDGFGTADCLIVSDETLHIIDFKYGLGVLVDAYENPQMKCYALGALAIYESLFDIKEISMTIFQPRRENISTYTIFTSELKKWAEEVLKPKAEMAIKGEGEYCSGEWCKFCRASVRCRARAEDKLKLAKEEFKLPPLLTDEEIEEILSIIPDLTKWANEIMNYATESAVNHGKKWTGFKIVEGRSVRKYKDENAVIEKAKEHGYTDIFKSSLITLTEMQKLMGKAKFEEVLGDLIIKPSGKPTLVPESDKRKAMNISNINDEFMEEK*	mmseqs_cdd	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0072	shell	direct	moderate	1176	0.985	GCA_000223295.2_00808
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	147279	147572	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	47230	47523	GCA_000223295_2_4_185	GCA_000223295_2_4_185	-	164720	.	.	hypothetical protein	MKKEFVELVVKDLEMLISHLKELLVDEEDGKVEKPRAEPSKKIGLEDVRAVLAKLSQHGKTAEVKDLLTKYGATKLSDVDEGKYKDLLKDAEGIEID*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0073	shell	direct	high	293	0.997	GCA_000223295.2_00809
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	147569	147805	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	47520	47756	GCA_000223295_2_4_186	GCA_000223295_2_4_186	-	164720	.	.	hypothetical protein	MCKGESLTERSKPMKHKVVINVTDDKGDKTKVLRGAQMWLPRRLIKWLFGEYTQVYLLEPGKTVESVDVKEIMKGESL*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0074	shell	direct	moderate	198	0.835	GCA_000223295.2_00810
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	147852	148505	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	47803	48456	GCA_000223295_2_4_187	GCA_000223295_2_4_187	-	164720	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MIDLSANKERQGFLMRIHKTNQKDRSVYNYKTTVRTEKGEYVEKTMTLKPGEYGVTELDIKMLHSMDDSEVYYNLKNARPERTKEEKAEIEVWKQKFISDFTKRYGYEPNKYIIEDAVNDAFPRNYNLSLDFDADGDIDPDKRLIASISDKESDEMFEWSERMEEVLSLLTDKQRLVINLMFVEGYKQSEIADLMSISSAAVKKHLDKAKEIIKNNF*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0075	shell	direct	moderate	612	0.936	GCA_000223295.2_00811
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	148745	149659	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	48696	49610	GCA_000223295_2_4_188	GCA_000223295_2_4_188	+	164720	.	.	hypothetical protein	MNNTYPRLCGGTFLVLLLRAKRTKAKKDIRKFSANGITNPEFLKGLITIFDSSYYEPSGSSLETNTSRYKKCEISKADCLPFDDNALITAFDRQIKEDYYTTLVKMKELLDYFLTIDKAPKIDELVYGILNLIKDDQSINQDAIFYTLPNGKGITKIDLLSTLNINFYSLVLGVWHFILTNRKDNKIGASTIKSWHEEPLEKGEAHIFTSSIGSTYHLDIKISTLIEQNESAEREISDEVNKDFFEEPEIEILCSVDTNETSTHQENKQPTINNQFIFNQSGSGVNIGQATNVIIKNGKVVDAE*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0076	shell	direct	high	914	0.999	GCA_000223295.2_00812
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	149656	150330	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	49607	50281	GCA_000223295_2_4_189	GCA_000223295_2_4_189	+	164720	.	.	hypothetical protein	MNNDLDIAKTESTLPSEKTNTYKFEQSGQGTNIGLAQNVHNTTVNIMLPSSNNMIGAPTYIQKTINMEYFNLFVILGEQYDKPYFVVDIKRALTVVEGTAKSIHDKLASFSEEAKVEIMSYPCIFANENYRYSPPETTPSVPQMAQYGFITKIQQLHNGDLKIYFQSLTMCPIPQDLLSSMVTELDLQGNDTFNEFDRTHWSIKNVNIVEELKLKGISLLIPSI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0077	shell	direct	high	674	0.999	GCA_000223295.2_00813
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	150346	150540	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	50297	50491	GCA_000223295_2_4_190	GCA_000223295_2_4_190	+	164720	.	pfam12728	Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	MAELNQETEKWVNLEDIADHLSVSKDTIRIWIKDGKLPFYKAGKMYKFKISEVDEWVRKGRITE*	mmseqs_cdd	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0078	shell	direct	high	194	0.995	GCA_000223295.2_00814
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	150558	150686	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	50509	50637	GCA_000223295_2_4_191	GCA_000223295_2_4_191	+	164720	.	.	hypothetical protein	MNEKITSAITKVSLNQATFLNKSFTPSYINFCLVKMDVANLR*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0079	shell	direct	high	128	0.992	GCA_000223295.2_00815
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	150650	151048	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	50601	50999	GCA_000223295_2_4_192	GCA_000223295_2_4_192	+	164720	.	COG4694	Wobble nucleotide-excising tRNase [Translation, ribosomal structure and biogenesis]. 	MFGKNGCGKSTVAKVLKDKTDMVWDTGHSSNDYLMLVYNEDFINKNIASYSGMPGVFTISEQNAQIQKDIEDATAELGIAQTTLKNASESLSKQEILLNKQQDTFQTICWEKQKTSENQLTLLWQEKRLKMA*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0080	shell	direct	high	398	0.997	GCA_000223295.2_00816
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	151018	152817	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	50969	52768	GCA_000223295_2_4_193	GCA_000223295_2_4_193	+	164720	.	pfam13166	AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	MAGKKTKDGLTKALLSETNPTEFNSDSLIAMCEAAFSNDATIYPELYKADISSIPTSSILSKPIISSSSSEFASFMKSINATDWVRQGHEQFHSEDKCPYCQQKLPSNFEEEIVRCFDKEYEADLSILRSFKANYGAAINDIWKSFSNNLSNAYPKIKNELDSYAKLLDTFRAKVEINSQRFNDKIAHPNTVVELEDLTPLIIELNDTIDSMNSKIKENNDIVSDRAKKQPQCKAAVISYLAFILSDELAKFRDSRSNLQKEIDTLTKEKTAAHNKVTDLRKTISSLRKKVVNTSAAVEGINTLLADTGFQGFYLREKENTPNVYEVIRTNTGLVAENLSEGERNFIAFLYFHQLVLGSPEADAVVNDKIVVIDDPVSSMDSSTLFVVGALVRDMIAICNPDYTTKEHSKDHIKQIFILTHNAFFHQEVTYNQAQHYRFVSFFEIVKYDNNSDVILCTQKNRETPSLMENRNPIQNSYAALWDTYKEVSYPNTLVNVIRQILDYYFLQLCGYSGMDIKDIILKQHRDDFIKKLPDGTEDCSDLHLAASLLQYLCTSNDRISDGLNFIHASVDTDSCRRIFENIFRHIGQGQHFDMMMNR*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0081	shell	direct	high	1799	0.999	GCA_000223295.2_00817
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	152919	153851	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	52870	53802	GCA_000223295_2_4_194	GCA_000223295_2_4_194	+	164720	.	.	hypothetical protein	MDNLWLLTEERPKPSVILQIIEMYCNDFDDSIIFNTKIKIKPHIENGCFKFIYEVEGLKVNNADKIFIKTVSGSSSFLDFLLFKQADAPTEGNHNDNLIMAIEETKTSDDESRNTGVYQRGSKFVYITPYYDSVKLYMLYNEELEARQDKKPSDTSIFGTNILLTLGVTIVGKEIAKWFKPFSSLEELIEFKSGMRQPPAGNVPITITQYDDRIEISGRLSKPGDAGNIGHDPNIGALSMISKCIRTLGWNKDIIITMHGVRQEYVNKTKGKNKFLYICNILDLKLDGIIMPEKVELPELYWHYEMSSEK*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0082	shell	direct	high	932	0.999	GCA_000223295.2_00818
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	153848	154309	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	53799	54260	GCA_000223295_2_4_195	GCA_000223295_2_4_195	+	164720	.	.	hypothetical protein	MTSILLHVLGMYNGMYGVYENHAGCERGYFRTKLGRLITLPKKDRNGTNLYLPDVVLYDEPSNIILLVEGKKLSTLANGIEEIKYYDSIENEYIKPEYIGVNIIRCVSIFGGRKTGYLHDDVLIYMNLKGEIYINPNAPDCVKSMFRAMGVTI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0083	shell	direct	high	461	0.998	GCA_000223295.2_00819
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	154306	154851	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	54257	54802	GCA_000223295_2_4_196	GCA_000223295_2_4_196	+	164720	.	.	hypothetical protein	MILREEYIITPDFYQEALNYAQSSRAYTSNRHDFHAGGLNNKQQKMFEGKLGEKGFKMFLIENGIPFIEDHSSPQERDEYDFLLSTTEQQFLFDVKTRTKSFHTRTLEMVEQAQSHPKDIFISARLFSERNVVKLLGWYSFQDMINSGRIENNGYLDNYVMYDSDLRPMEELYNLILINCI*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0084	shell	direct	high	545	0.998	GCA_000223295.2_00820
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	155023	155268	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	54974	55219	GCA_000223295_2_4_197	GCA_000223295_2_4_197	-	164720	.	.	hypothetical protein	MPYVKKRGYVVVFIKDIQPNGKSTNLLHAEIINKLNEIPNMNYKGMKIWADQTAKLFPYGYPFSFVANQIHQYILVFRKEK*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0085	shell	direct	high	245	0.996	GCA_000223295.2_00821
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	155289	155645	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	55240	55596	GCA_000223295_2_4_198	GCA_000223295_2_4_198	-	164720	.	.	hypothetical protein	MGVGGTLLGAGICDRKAIGIDLNPAYIDAYKRAASEIGVPEFQCVEGDCLEVLGDNKKMEELLSGDEISLVLIDPPYGNMMSREKTGADIKVYGNVATPFTDSDKDFGNLELDIFLIG*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0086	shell	direct	high	356	0.997	GCA_000223295.2_00822
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	155875	156156	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	55826	56107	GCA_000223295_2_4_199	GCA_000223295_2_4_199	-	164720	.	.	hypothetical protein	MVSRNSILNIQAIETILSEAGIDEIEIIIREIETQAKKTIKQRIKEAQPHVNEAYDKGEFFLEIYPDYDRSKLPGWVAKEINVAKVIGNSKKQ*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0087	shell	direct	high	281	0.996	GCA_000223295.2_00823
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	156132	157025	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	56083	56976	GCA_000223295_2_4_200	GCA_000223295_2_4_200	-	164720	.	PDB:2DPM_A	Adenine-specific-DNA-methyltransferase	MSYIKSPLNYTGGKYKLLNSLFRIFPNDINVFVDLFAGGFNVGINANANMIICNDQIHYVIKLYQYLACTNIDTIIKEINQRINEFSLTKQNADGYNALRERYNEGKDIVDFFVLTFYAFNHQIRFNNSQKFNTPFGKERSSYNESIERNLISFCQALQCKNIVFQNKDFLSVDLSYLGERDLVYCDPPYLISTGSYNDGKRGFKDWTPVEERQLLDLLDELNERGVKFALSNVLYHKGMSNDLLIEWSKKYTVHYLDKSYANCSYNFKEKDAKTVEVVIVNFESEDFVQWYQETLF*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0088	shell	direct	high	893	0.999	GCA_000223295.2_00824
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	157035	158066	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	56986	58017	GCA_000223295_2_4_201	GCA_000223295_2_4_201	-	164720	.	PFAM:PF02086.14	Adenine-specific-DNA-methyltransferase	MRFIGCKTLLLDNIKQVIEEKAPDAESLCDIFSGTATVARYFKRWYEVYSNDLLYFSFALQKGTVENDSVPTFEELKESTGINDPIKYFNGLTNQEMQSLSQEKRFFQNTYAPTGGRMYVNDENALRIDFARITVEEWHLNGLLSDNEYYYLIACIIEGIPFVSNISGTYGAFHKKWERRSHKKYELFRLEVTHNGKANKCYNRDGVELLKEISGDILYIDPPYNGRQYLPNYHVLETAAKYDYPEVRGVTGQRPYENNKSDFCLKTKVVKAFDELMCNANFTHIILSYSTDGLMNVEDIEFTMKKYGKPETFKIYWIPYRRYKSRAQGDKEELKEMLVYIEK*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0089	shell	direct	high	1031	0.999	GCA_000223295.2_00825
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	158063	158248	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	58014	58199	GCA_000223295_2_4_202	GCA_000223295_2_4_202	-	164720	.	.	hypothetical protein	MENTLMYLDTYIIQQDMRIRLPKCILTNMKVEKGVSKFDIYLDPVNNELVLKIHDEGGKNE*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0090	shell	direct	high	185	0.995	GCA_000223295.2_00826
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	159046	159666	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	58997	59617	GCA_000223295_2_4_203	GCA_000223295_2_4_203	-	164720	.	.	hypothetical protein	MRDKYSKSNINNVSGNIFNGPTNIAAGNNYYKEAEEDKVASYTPEPVWRSPITMAMLSWMGFIISLIGLFPMYKMLEPIINLITNKSIKVDLNNNIYVIIFAVIFILFVLVLCLRSITKKETRHPLFFNYAISGLGRKITIEKIRIDKCPICGGTMKYFNKAVECRDITYSDGRTKREVTKKVPALQCKRNSDHWYEVDPAADKLK*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0091	shell	direct	high	620	0.998	GCA_000223295.2_00827
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	159680	160624	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	59631	60575	GCA_000223295_2_4_204	GCA_000223295_2_4_204	-	164720	.	PDB:4BQQ_A	Integrase	MNERKDIVENVTVIQKQRAIKDYAVGIYARVSTSHKAQMDSLSAQVSGLTRLAAVHRTWFVADIFIDVASAKTGSTRSEFNRMINECEHGNLDIILTKSLSRFGRDAKEGLEAIRRIRAAGKRIIFEKDKIDTETVKDELLISIIEACDQAENDWRSENIRLGLKYRAEDGTSGLYNRACYGYKKDKNGMLIIDEEEARVVRRIYDWYLEGYSIGGIIDKLEEKKIKTSKGKERWSKRAIESTLTREKYTGDVAIADPGGSENRYLYKQHHEGIISKEQFKAVQLEMELRSNVEIGEDGKARRKSKKYSSKILK*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0092	shell	direct	high	944	0.999	GCA_000223295.2_00828
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	160905	161087	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	60856	61038	GCA_000223295_2_4_205	GCA_000223295_2_4_205	-	164720	.	.	hypothetical protein	MNDVERRQLITALISEIQIYEEKQPNGQWLKSITFKLPVIDEDLNISLDNDKQVECVVLM*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0093	shell	direct	high	182	0.995	GCA_000223295.2_00829
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	161114	161731	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	61065	61682	GCA_000223295_2_4_206	GCA_000223295_2_4_206	-	164720	.	PDB:4BQQ_A	Integrase	MWQAAQVKLKSQAKKYEHVNKGKDVRTHLLSGIVKCPICGVGMFGNKCIKKKKDGTKYKDFYYYGCKHRQMIRGHKCTFSKQIREELLDDAVAELIIKIVSNPKFASIMQEKINMKVDTSEIEKEIDNYQKELRKSHSIKFKLIEEIDNLNVDDKHYKRRKQDLDDRLYRMYDKIEELESLLIDAKAKNKLLKLKNLQEIIYIKF*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0094	shell	direct	high	617	0.998	GCA_000223295.2_00830
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	161887	162477	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	61838	62428	GCA_000223295_2_4_207	GCA_000223295_2_4_207	-	164720	.	PDB:4BQQ_A	Integrase	MKAFALYNDYEIVGEYEDAGKSGKSIEGRVQFTRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQTMQDFGVNLICVEDGIDSSKDAGKLMISVLSAVAEIERENIRVQTMEGRIQKAREGKWNGGFAPYGYQLVDGKLFINEEEAVAIRTIFEQYVNTTIGANGLSKYLENHGIRKIPRQNGKIHYLMRGL*	common_virus_hmm	common_virus	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0095	shell	direct	high	590	0.998	GCA_000223295.2_00831
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	162474	162821	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	62425	62772	GCA_000223295_2_4_208	GCA_000223295_2_4_208	-	164720	.	.	hypothetical protein	MSVDKDWNGLADLIANLITKYAGVLDLDNLPDPMPVDNNIENKNIFDIAKTQIDKNKSDIIYLIYKSKLFWKYKDIEKYIEVNAMSKEKIKVYLYTRVSTSIQIDGYSLEAQKQE*	.	hypothetical_protein	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0096	shell	direct	moderate	342	0.983	GCA_000223295.2_00832
GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote	cenote	CDS	164183	164719	GCA_000223295.2	AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295.2_AFUP01000006.1	GCA_000223295.2|AFUP01000006.1	GCA_000223295_2_4	GCA_000223295_2_4@C5	64134	64670	GCA_000223295_2_4_209	GCA_000223295_2_4_209	-	164720	.	NF033396	pilus ancillary protein 1. 	KNGKAIVKGIEVTGNTIVMVDKLKELPPPPSTPPTKVKFSKKALTENGEELKGATIRLTKEDGSLVKEWVTDGTVKEFELKDGKYTFTEISAPAKYQVATAITFEVKNGKAIVKGIEVTGNTIVMVDKLKELPPPNTNTNKTLPKTGEGTNISLYAWLMLTSGTLLVLIGYRRRNHAK*	mmseqs_cdd	nonviral_gene	C5	64671	100050	164721	GCA_000223295.2|AFUP01000006.1@region_100051_164721@tool_cenote_CDS_0097	shell	direct	moderate	519	0.966	GCA_000223295.2_00834