core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3902869	3904089	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	1	1221	GCA_000297075_2_1_3760	GCA_000297075_2_1_3760	+	4686340	.	PRK10885	multifunctional CCA addition/repair protein. 	MQIYKVGGAVRDRLLGRPVSEVDWVVVGASAEQMLELGYRPVGADFPVFLHPQTGEEYALARTERKSGRGYGGFTFHASPDVTLEQDLIRRDLTVNAMAEDDQGNLIDPYNGQQDLKARILRHVSPAFAEDPLRVLRVARFAARYAPLGFSVAPETLMLMRQLAESGELAHLTAERSWKEISRALMEPRPEVFVQVLRDCGALAALLPEVDDLFGVPQPQAHHPEIDTGVHVLSVLHQCAEHDQPLNVRWACLLHDVGKGLTPEAEWPRHIAHEHKGLRLIEAINARCKAPRECAELAMLVGEFHTHGHRALELRPSTLLELLQRFDVFRRPQRFVEFVAACEMDARGRLGLEQRDYPQAAYLLGAAEAARQVPVKPLVEKGFKGAELGEALNRERLQALKIYKDQ*	mmseqs_cdd	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0001	persistent	direct	high	1220	0.999	GCA_000297075.2_03901
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3904463	3904996	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	1595	2128	GCA_000297075_2_1_3761	GCA_000297075_2_1_3761	-	4686340	.	COG0801	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme transport and metabolism]. 	MPLTRVFLGLGSNVEREAHLTAGLDALAGLLSDMRCSPVFESHAVGIKSGNFFNLVVVGETELPLLELDRRLKFIEADNGRYAPERKGLPLDIDVLLYGEQVGNFNGLILPRAEILKNAFVLWPLALLAPQLQHPVAGRSFAELWASAQIDQQLWPAAFQWRGTELTPPELLQARPA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0002	persistent	direct	high	533	0.998	GCA_000297075.2_03902
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3904987	3905343	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	2119	2475	GCA_000297075_2_1_3762	GCA_000297075_2_1_3762	-	4686340	.	PRK11593	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase. 	MDRVFIEGLEVDTVIGAYDWEREIRQCLRLDLQMAWDNRPAAAGDDLNLALDYASVSTRIQAFAAESQFILVETFAERLVQTLMEEFNIPWMRLKLTKPGAVPAARGGVGVEIERGCL*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0003	persistent	direct	high	356	0.997	GCA_000297075.2_03903
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3905419	3905988	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	2551	3120	GCA_000297075_2_1_3763	GCA_000297075_2_1_3763	+	4686340	.	PRK00220	glycerol-3-phosphate 1-O-acyltransferase PlsY. 	MFWLLAILAYLLGSLSFAILLSRLAGGPDPRASGSGNPGATNMLRVAGKKLAVMTLIGDLLKGLLPILIAKLLGLSLHQQAWIGLAAVGGHLYPLYFRFRGGKGVATAAGMLLGLYPPAALLALAAWALVFLLTRISSLASLIATPLTLPLLAWQQPAALLPACVLTGLIVWRHRSNLRDLFAGRERRF*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0004	persistent	direct	high	569	0.998	GCA_000297075.2_03904
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3906082	3907107	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	3214	4239	GCA_000297075_2_1_3764	GCA_000297075_2_1_3764	-	4686340	.	COG0533	tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]. 	MLVLGLETSCDETGVALYDSERGLLADALFSQIDLHRVYGGVVPELASRDHVKRMLPLIRQVLDEAGKQASDIDALAYTAGPGLVGALLVGASCAQALAFAWGVPAIGVHHMEGHLLAPMLEEQPPAFPFVALLVSGGHTQLVRVDGIGQYQLLGESLDDAAGEAFDKTAKLMGLNYPGGPEIAKLAEQGTSGRFVFPRPMTDRPGLDFSFSGLKTFALNTWQQCRDSGDDLDQARRDIALAFQQAVVETLTIKCKRALKQSGLNSLVIAGGVSANKALREHLERMLGEMKGKVFYARPRFCTDNGAMIAYAGCQRLLAGQHEDLAIKVQARWPMESLPAL*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0005	persistent	direct	high	1025	0.999	GCA_000297075.2_03905
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3907311	3907526	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	4443	4658	GCA_000297075_2_1_3765	GCA_000297075_2_1_3765	+	4686340	.	COG0828	Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]. 	MPAVKVKENEPFDVALRRFKRSCEKAGVLAEVRSREFYEKPTAERKRKAAAAVKRHAKKVQREQRRSVRLY*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0006	persistent	direct	high	215	0.995	GCA_000297075.2_03906
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3907674	3909677	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	4806	6809	GCA_000297075_2_1_3766	GCA_000297075_2_1_3766	+	4686340	.	PDB:5IKN_F	DNA-polymerase	MAGLIPQSFIDDLLNRTDIVDVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAIEELAKRAGMDVPREESGRGHKPRQPVDSPLYPLLNAAAEHYRQALKSHPQRKYAVDYLKGRGLSGEIARDFGIGFAPPGWDNLLKQLGADALQQKVMIDAGLLIENAENGRRYDRFRDRIMFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKHNRDLDEIMVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLFRIVPSVLFCFDGDAAGRNAAWRALESTLPSLQDGRRARFLFLPDGEDPDTLVRAEGTDAFRARINQHAQPLADYFFHQLCEEADPRSLEGKAHLVTLAAPLIDKIPGNNLRALMRQRLSEITGLSSEALSQVAGSAPRSHAPSASSQTPSSDYPDYGDIPDSAYYDSLPDVGSYEQPAPPRQHYERSSESGKGSWKKDGDGKWNKKGKGDFAPRAPRTAVSVESPHLIALRTLLHHPHLAQKVEDVSHFADEDDTYAQLLVALVGALQKTPNLRSLQLIARWHGTEQGRLLRALAEKEWLIQGDNLEQQFFDTITTLANSQSQRRREKALRSIIHKSPSELTDEEKTLLREHYSLTSSQSSKPPTGA*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0007	persistent	direct	high	2003	1.0	GCA_000297075.2_03907
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3909745	3911592	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	6877	8724	GCA_000297075_2_1_3767	GCA_000297075_2_1_3767	+	4686340	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MSVKAQQQSRIKELITLGREQKYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGIPVHESAPDADALMLADADTDEAAAEEAAAALAAVETDIGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEEGIREVMSAIAHFPGTVDGILAEYTRVTTEGGRLAEILSGYIDPDDGSVPDEAAAPVPVKEGAAAEASDEEEEDESGDDEEEEGDGGPDPEEAARRFTAVAEQLEKARKALKKHGRGSKQAIEELATLAELFMPIKLVPKQYDALVTKVRDALDRLRAQERAIMQLCVRDARMPRADFLRLFPGNEIDMDWAANLAKGKAKYAEAIGALQADIQRCQQKLADLEAECNLTLAEIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELGERMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIDVATVESLKEATREVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSEHLRSFLDE*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0008	persistent	direct	high	1847	0.999	GCA_000297075.2_03908
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3911755	3912666	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	8887	9798	GCA_000297075_2_1_3768	GCA_000297075_2_1_3768	+	4686340	.	cd01007	The type 2 periplasmic ligand-binding protein domain of the sensor-kinase BvgS and histidine kinase receptors, and related proteins. This family comprises the periplasmic sensor domain of the two-component sensor-kinase systems, such as the sensor protein BvgS of Bordetella pertussis and histidine kinase receptors (HisK), and uncharacterized related proteins. Typically, the two-component system consists of a membrane spanning sensor-kinase and a cytoplasmic response regulator. It serves as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. The N-terminal sensing domain of the sensor kinase detects extracellular signals, such as small molecule ligands and ions, which then modulate the catalytic activity of the cytoplasmic kinase domain through a phosphorylation cascade. The periplasmic sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	MPAIVLLCLAYRMTTALALTLNEDERTWLAAHPELRLGVDVSWPPFEFRDEQGNDHGLTAAYVRLIEERLDVKLQPVEPSNWSAILEQPHMGQVDQLPGVMSTPKRQEYLIFTRPYLDLPIAILARNGGPQSRKLNERYGLKIAVVADYAPHELLRQQHPDLNLLPLRNIAAALQALATNQVDAMVGDLASSVWSLRQLKLDGVYISGETLYRYQLAMAAPRGQSMLVGTRQTLRRAQHRRNRCLAGTLGRQRAGQTQRLARNPALRPASPARSAGGHRHHPAHQPPPETRDAQPRSAGAGTT*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0009	persistent	direct	high	911	0.999	GCA_000297075.2_03909
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3912937	3913737	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	10069	10869	GCA_000297075_2_1_3769	GCA_000297075_2_1_3769	+	4686340	.	COG5001	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain  [Signal transduction mechanisms]. 	MRVRDIVTLQQRDDHQVIRGLMVDISEAKQSVQALRLSEQKFVSVFQQCPDILIIARRVDGVLLEVNTAFTEQTGISVEQAIGKTATELDLWGVPGIGPSLLPRISALLQRYNLAPELLQLEIIENFIMNQAGEALDILHRLKQLGVQLAIDDFGTGYSSLSYLKCLPLDVLKIDQSFVRSLPDDPHDLAITRAIIALGNSMQLTVITEGVAGTLPGRRRLPADPGLRGQLPAFRRGLHPEISPTRSSGWRWRERAGIICRPSGGL*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3914183	3914365	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	11315	11497	GCA_000297075_2_1_3770	GCA_000297075_2_1_3770	+	4686340	.	.	hypothetical protein	MSKRAAFKLFSWLGLAFTAVTVITPYVPSAAVHEAAFLALIGLYVPIAGLIWRYAPQQAN*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0011	cloud	direct	high	182	0.995	GCA_000297075.2_03911
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3914521	3915438	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	11653	12570	GCA_000297075_2_1_3771	GCA_000297075_2_1_3771	+	4686340	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MPHAPTLYSKPAKNPHALLRHLRTKGLNTRGQRDKAIKALEFIGYFRLLIYMRPLQDAAKQFHPGVRFDDILALYDFDRRLRLVCLDAIDRIEVAFRAAIANTLANDRSCGPHFYLDAIHFQGLDEHRDFLKNVLGLRIKNAPIKHYYDTYNSPPFPPIWAVLEAMSIGQLSRLLAGLHLDHRKSVAACFGYDESVVCSWLKSLTLLRNLSAHHGRLWNTSITSDTPVFAKAIKQEFPAHTDRGRVFARAVAVQALLRVVDPTADWKDKFKGLMATLPTATLAKAGMTPAILGLVPGWETRPFWN*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0012	cloud	direct	high	917	0.999	GCA_000297075.2_03912
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3915486	3915941	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	12618	13073	GCA_000297075_2_1_3772	GCA_000297075_2_1_3772	-	4686340	.	PFAM:PF00929.23	Rnase-H	MITRIYLDTEFTSLNRYTCKLISLALVVPGGPEFYVELIDAWEEGDCSDFVQEIVLPQLDLVAYGRTTEQARIELLDFLQELGQVEIISDAFDWDWPLLVWLAGPGGIPDGVESDQACIDGEILEEIGEPPHHALQDARMLAQLVERSNLA*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0013	cloud	direct	high	455	0.998	GCA_000297075.2_03913
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3915938	3916555	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	13070	13687	GCA_000297075_2_1_3773	GCA_000297075_2_1_3773	-	4686340	.	COG1011	FMN phosphatase YigB, HAD superfamily [Coenzyme transport and metabolism]. 	MITDRAVIFDVFGTLLKIQGGRHPYRQLLQLGRAQGRRPRPDDAEVIMRSPLDFSQMAAHLGIEVAVDQFVDLEQQLADEVEGIEPFDDGLAAVDLLQGEGVRVGVCSNLASPYCAAILRHFPTLDAYAFSCDLGVIKPSPGIYEMTCEMLGTPPAETLMIGDSLRCDRDGPRAVGIRGFLLDRVGGGDYTDLASFAGHVMRARK*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0014	cloud	direct	high	617	0.998	GCA_000297075.2_03914
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3916545	3916961	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	13677	14093	GCA_000297075_2_1_3774	GCA_000297075_2_1_3774	-	4686340	.	pfam18143	HAD domain in Swiss Army Knife RNA repair proteins. Family of HAD domain phophoesterases observed in large eukaryotic proteins with predicted role in RNA repair, the so-called 'Swiss Army Knife' repair proteins. May be involved in phosphate group removal during RNA re-ligation.	MVPLLPKPHQRLRSLPRLVEILRDFTQVEVVISSLWREKLSLDELRELFPTEIRSRIIDVTPIVERVDGWLPARREGEILEWLESTGRIGEPWLALDDAGWQFTQYRDRLVECVFYDGLDDRIEALLRKKLAEVSCDN*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0015	cloud	direct	moderate	408	0.978	GCA_000297075.2_03915
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3916977	3917906	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	14109	15038	GCA_000297075_2_1_3775	GCA_000297075_2_1_3775	-	4686340	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MKIGYARVSTRDQKADLQVDALKQAGCERIYQDIASGAKSARPELDKLLANVRPGDAVVIWKLDRLGRSLKHLVELVGELAERKVGLQSLNDPIDTTHAQGRLVFNLFASLAEFERELIRERTQAGLSAARARGRIGGRPKGLPAKAEATAMAAETLYREGRLSVSAIGEKLHISKSTLYSYLRHRGVEIGAYQKSARSRDQQPSAASPAEPPAAERVATVTLRLAVVNNSKFVRGRKRATENIERYCLEPYGMKRLDAGHYELTIPYRSDDELDKSVHDLLTEISQEADMRNCFVEMGAWEEDTEKRW*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0016	cloud	direct	high	929	0.999	GCA_000297075.2_03916
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3918108	3918347	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	15240	15479	GCA_000297075_2_1_3776	GCA_000297075_2_1_3776	+	4686340	.	pfam16762	Ribbon-helix-helix domain. This ribbon-helix-helix domain binds to DNA and may be a part of a toxin-antitoxin system.	MNTIRWNVAVSADTDQSLRMFLASQGGGRKGDLSRFIEEAVRAHILELSAEQAKAANAHLSEAELTNAVDEALDWARKR*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0017	shell	direct	high	239	0.996	GCA_000297075.2_03917
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3918347	3918757	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	15479	15889	GCA_000297075_2_1_3777	GCA_000297075_2_1_3777	+	4686340	.	cd18715	uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	MRVVLDTNILFSALISPHGAPDAIYRAWRAARFEVVTSRMQLDEIRRASRYPKLQAILQPAKVGAMINNLQRAVVLERLTIEVEADDPDDSFLLAMALAGDADYLITGDRRAGLLQRGHIERTRIVTPAVFCVEVL*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0018	shell	direct	high	410	0.998	GCA_000297075.2_03918
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3918761	3921754	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	15893	18886	GCA_000297075_2_1_3778	GCA_000297075_2_1_3778	+	4686340	.	PFAM:PF01526.16	Tn3-transposase-DDE-domain-protein	MPVGFLTQEQRDGFGRYVDSPSREELERYFHLSDEDREAIQVLRGNHNRLGYAVLLTTVRFVGVLPDKPAAVPVEVLQVLCRQLAIPDPDCLQRYSDHRRWIHATDIQNRFGYRHFTDPGIGFRLSRWLYALCWTGTDRPGVLFERATSWLFTQKVLLPGVSQLERFIAQLRSRVEERLWFTLGRSVTEEQRLQLQDLLTVAEGNRSSRLDQLRSGPVMVSGPALIRALRRLDDVRGIGITLPAAAHIPPSRIAALARFANTAKVTAINRLPASRRMATLVAFALCLEATAHDDALEVLEALLRDLFSNAEKADKKARMRSLKDLDRSAATLAAACKVVLDSSISDDNVRARLFNDLPRTTLEKALEEVNALIRPVDDVYFLALEARYRSVRRFLPDLLKHIRFGFSPAGKGVAASLEWLQLNLPRRKPEDDAPQEIVAKAWQKHITREDGSLDMGAYVFCTLDALRTALRRRDVFVSPSWRYADPRLGLLDGAEWLAARPIICRSLGLTIDAKTTLDALSVELDATWLAVAARLPDNPAIQLSENTEGKTELSLGALDKLDEPCSLLQLRAAVSDLMPRVDLPEILLEIAARTGFSEAFTHVSERNARADNLVTSLCAVLLGGACNTGLEPLIRTDNPALRRDRLSWVSQNYIRDDTLSAANAILVGAQSQLELAQVWGGGEVASADGMRFVVPVRTVHAGPNPKYFGTGRGVTWYNLISDQFSGLNAITVPGTLRDSLVLLAVVLEQQTELQPTQIMTDTGAYSDVVFGLFRLLGYHFSPRLADVGGTRFWRTRPDADYGKLNGLARQSVKLDLIAEHWDDLLRLAGSLKLGRVPATGIMRTLQTGDRPTRLAQALAEFGRIEKTLHTLTYIDDESKRRATLTQLNRGEGRHSLARAVFHGKRGELRQRYREGQEDQLGALGLVVNIIVLWNTLYMTAAVERLKQHGYPVLEEDLARLSPLIYEHINMLGRYSFAVPEEVARGELRPLRNPDDDL*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0019	shell	direct	high	2993	1.0	GCA_000297075.2_03919
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3921767	3921979	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	18899	19111	GCA_000297075_2_1_3779	GCA_000297075_2_1_3779	-	4686340	.	7EU1_L	DNA-directed RNA polymerase IV, RNA-	MSAIVLESVLTCPRCGFAKPETMPTDACQFYYECSNCKALLRPNPGDCCVFCSFGSVKCPPIQQQLGCCS*	hhsuite_tools	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0020	shell	direct	high	212	0.995	GCA_000297075.2_03920
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3921987	3922262	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	19119	19394	GCA_000297075_2_1_3780	GCA_000297075_2_1_3780	-	4686340	.	TIGR02052	mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403). [Cellular processes, Detoxification]	MRKLLIAVLFALPFVALAAPPKTVTLDVQNMTCGLCPITVKKSLEKVSGVSDVQVNFDQKTATVTYDPDKAQPEALTEATANAGYPSTVQK*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0021	shell	direct	high	275	0.996	GCA_000297075.2_03921
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3922275	3922625	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	19407	19757	GCA_000297075_2_1_3781	GCA_000297075_2_1_3781	-	4686340	.	PRK13751	putative mercuric transport protein; Provisional	MGMQLTGKGSLVASSLTAIGASVCCVGPLVLLALGVGGTWVGALTMMEPLRPLFIGLTLLFLGLAFRKLYLVPQVCTPGTPCADPRTLVRQRLVFWIVSVLLLGLLAVPWLAPLFY*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0022	shell	direct	high	350	0.997	GCA_000297075.2_03922
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3922700	3923098	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	19832	20230	GCA_000297075_2_1_3782	GCA_000297075_2_1_3782	+	4686340	.	TIGR02051	Hg(II)-responsive transcriptional regulator. This model represents the mercury (II) responsive transcriptional activator of the mer organomercurial resistance operon. This protein is a member of the MerR family of transcriptional activators (pfam00376) and contains a distinctive pattern of cysteine residues in its metal binding loop, Cys-X(8)-Cys-Pro, as well as a conserved and critical cysteine at the N-terminal end of the dimerization helix. [Cellular processes, Detoxification, Regulatory functions, DNA interactions]	MATELTIGKLADAAGVNVETIRYYQRRGLLDEPAKPLGGHRRYPVDMVKRLRFIKRAQALGFTLSEVGGLLTLDESCACAETRARAARKLALIEQKMADLVVMQQLLGELVQQCDAGDGGTICPIIEALIRE*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0023	shell	direct	high	398	0.997	GCA_000297075.2_03923
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3923507	3924427	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	20639	21559	GCA_000297075_2_1_3783	GCA_000297075_2_1_3783	-	4686340	.	COG1230	Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]. 	MAHEHNHNTEAIGDKRLIAAIGVNAALTLAQVVGGILSGSLSLIADALHNLSDAASLVIALIARKIGRRPPDAFKTFGYRRSETIAALINLVSLIIIGLYLIYEAIGRLYSPQPIEGWTVVVVAGIALIVDIATALLTYTMSKDSMNIKAAFLHNVSDALASVGVVVAGTLILLYGWYWTDTVVTLMIAGYVLWQGFSMLPKTIHLLMEGAPEGVSIADIINVMEQVDDVESVHHVHVWEIAEHTIALEAHVVIKKASLPDIERVKTDLKRVLHEQFKVSHSTLEMELDGSVCIDTRQADNHRSEA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0024	cloud	direct	high	920	0.999	GCA_000297075.2_03924
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3924498	3926279	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	21630	23411	GCA_000297075_2_1_3784	GCA_000297075_2_1_3784	-	4686340	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MNPRRQAAILQQRRTHHLASNADAYAFFNLLTGPELFDQVESLLPDHRERLFPPTETLSMFMAQALSADRSCQRAVNELAVKQLRAGLKPCSTHTGGYCRARQRLPVEMVSSLVRNTGNLISSNARSGQWMGRPVRLVDGTTVVMPDTQANQDAYPQSRGQKPGLGFPICRMVGIVCLSSGALLNAALGRFRGKGGDEQTLLRSMLDTLNTGDVLLGDAFYATYFLLCELQRRGIDGVFEQYGARRRSTDFRRGTRPGTRDHLITLEKPRKRPAWMSQASYEQAPDQLEVRELKRNRGSSGAYSARCAQQQMNIRRQVCRPKRKLVPGSERFELVAHMLRKRLSPEQIAGKLRSMTIPNLRDAYVCRETIYNAIYALPVGELRKELIVCLRQGKTTRRPRSGGVDRRGQIPEMVSIHVRPPEIEDRLMPGHWEGDLIKGKANASSVGTLVERTSGYLMLMKMNDATATSAMEGFSAALNSMPLAMRKSMTYDQGREMARHAEITQQTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVHSQEQLNAIALELNMRPRKRFDFKCPIEVMGEVMQEAMAMRHHAPASNQ*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0025	cloud	direct	high	1781	0.999	GCA_000297075.2_03925
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3926566	3926778	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	23698	23910	GCA_000297075_2_1_3785	GCA_000297075_2_1_3785	+	4686340	.	PDB:2QGZ_A	Putative-primosome-component;-Helicase-loader	MLELLDDRYGQRSTLVTSQMPVDNWHELIGDPTLADAILDRLVHNAYRINLKGESMRKRVKKLTAPGASD*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0026	cloud	direct	high	212	0.995	GCA_000297075.2_03926
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3927176	3927913	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	24308	25045	GCA_000297075_2_1_3786	GCA_000297075_2_1_3786	-	4686340	.	cd07404	Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain.  Microscilla proteins MS152, and MS153 are also included in this family.  The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	MRIHLLSDLHNEFSAFTPEQLDCDVVILAGDIDLKARGVEWAKQSFSGPVLYVPGNHEFYGGHLTWTLEKLRAAQDDRVRVLDRDELILAGVRFLGATMWTDFEATGNPHIAAFSAQTALNDFRQIRAENYRRIRPADLIARSVQTKDWLRDRLAEPFDGPTVVITHHAPTLRSLQGNPHAGTDLDAAFANRWEDLMGSDHVALWVHGHSHTAVDYELAGTRVVSNPRGYPGEETGFCPDLVIEV*	mmseqs_cdd	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0027	cloud	direct	high	737	0.999	GCA_000297075.2_03927
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3927916	3928368	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	25048	25500	GCA_000297075_2_1_3787	GCA_000297075_2_1_3787	-	4686340	.	.	hypothetical protein	MPKFLIKTADLPSANLHLVTPISAGRGWLELVKKAVEIAAGEPIASIKEKAGTLDVHIYTRDAAKFPQFNELRQASASTCEICGEPGTLAYHQVRCEDHQGWRTSRPFPPDQLGYIEACEWEEAPPFGREFGAVAGDQKHTPNAVPDAED*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0028	cloud	direct	high	452	0.998	GCA_000297075.2_03928
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3928371	3928631	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	25503	25763	GCA_000297075_2_1_3788	GCA_000297075_2_1_3788	-	4686340	.	.	hypothetical protein	MNVTELIEILKKFPADLEVVVEGYETGLDPIHLVKQADITRNPGLCGSKGFEDWDGEYALAGEIPGHTDNPRQAVAILGRRGHRRS*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0029	cloud	direct	high	260	0.996	GCA_000297075.2_03929
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3928628	3929080	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	25760	26212	GCA_000297075_2_1_3789	GCA_000297075_2_1_3789	-	4686340	.	.	hypothetical protein	MIQTLLQHLERADSGLFVHAPEGTCQRLAEVLGEAGKPLADLTMTEDSGLAIEQLVDQLAVEPGHTIAATLEAASRLVGEPIYVLIDRAERLENSDLTYALKAARDALASSELAGLRLAFFSIDFAALGRMTRLQGAAFFYATLIDGRTL*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0030	cloud	direct	high	452	0.998	GCA_000297075.2_03930
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3929077	3929571	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	26209	26703	GCA_000297075_2_1_3790	GCA_000297075_2_1_3790	-	4686340	.	PF18143.1	HAD domain in Swiss Army Knife RNA repair proteins	MIQRLLFLDFDGVLHPDAVYLTSRGVELRAEGVLFMWAPLLVGALAPHQDVQIVLSTSWARNLGFHRARSVLPAELQSRVIGATWHSAMGRGWPDFIPWDVQTRHEQIQAHLSRLSVPTNWIAIDDDDRGWAEADRDRLILTDPNQGLSAPETLAQLTHKLEHL*	hhsuite_tools	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0031	cloud	direct	high	494	0.998	GCA_000297075.2_03931
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3929568	3929819	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	26700	26951	GCA_000297075_2_1_3791	GCA_000297075_2_1_3791	-	4686340	.	.	hypothetical protein	MTQRLRPTIDLSYGEQEVLQRVLAEPRKIADALSPDDVREHSRIIGVLEEVAAAFAECFFQVVENLPDAEPEQTQQQSRGMSR*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0032	cloud	direct	high	251	0.996	GCA_000297075.2_03932
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3929831	3934303	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	26963	31435	GCA_000297075_2_1_3792	GCA_000297075_2_1_3792	-	4686340	.	PDB:3UPU_B	ATP-dependent-DNA-helicase	MTVFSADKFSSGDIAARAEYFEKGEGILLEDGQEPERSTGGEDYYHRPGADTLLTEYLGQGAQLMELGINPQDGDYAALMSGTNPRTGKSYVTERRQGELQRGTGLAGYSTSFNIDKTLSLVYAALPREQQVLFEKAVMEASRRTMEYAEGKGYFGYRLGAQGVERHAGKMMAAAYLHFTNRNQEPHLHVHVEIPNACLGADGKWRPLDGGEIFKRQAEFAALYDCYLAHALGRDIPQLSKHLESDLEHHGLRVAGISRETVLEFSTRRIEVLQGLDEMGASGAAAATGVAKRSRKGKKAVDAETLRAEWREQLQNLHQELQRGDLTPETKLFAEQLVFRNASVFGEHALDRAAAQLAILHGGEPAIPAIKTGLIRQLGVIELPQEGRHREFTTENYRQLEAELLAYAHGAQRPEARFTIKPLDTEMAIARIEREKGYAMRDEQRAVVRFCTSGARVQIIQGAAGTGKSVSLAALREAYESAGNRVIGLAPSGAAAAELQNSAGIQARTIHSLLMRLENDNAQYREKLRPSDVIICDEAGLADLRTLHKLAGYCDAAGAKLILVGDGRQLEAVGSASVLDMLTAEVGCAELIQIARQKDPADRAISQAWFEGPAEQGGPDALEMMKARGLLKMPADDTRDKPIDLVMRDALQAHAEGTDWQEILLLADRNQSVRSLNNKVREHRFKIGELDKAQQVRIPVETGRGDYADLDLAPGDRIMLRKNQKIDGEPVYNGDRATLTGIERVQTGTDDNGEPIYDTKLTARLDRTKEEVSWNLSDYASIDHAYAMTVHKSQGLTVDRAFYLTSDSTDRRLAYVAYTRSRYACGFYIGNDQESLDTLARNTAAFKSKRCALDADKEFRALIRANAEAGLYEAQPIKTPQPSTKDLLEKAGERFEYPTEPKAEPKVAPEIQVMPATQADHDLSVARGFAVTGLVDLPNDTRLKPGKPYELPADAKRVALLAVPLPLLQNTKEEIENERSGIFRADRERAPERIRELADAERAGRFTHHTVEDPRESAWANPRNGLRKLSECRLASDCGRGRTGVLQDHARDRGRTAAGVRRDGAAAQGQVGSDMPKPRRVWTKAEQQRETQAIRDRVDLRDHAERLGYVQVSGSGARVRMENKGLDKSDPMREITLKPNVKGEPSWVATKAGQGSGLGGDVFHLHQHATGQSFLETRDELRKLAFNKEFDASARYQGMSDAQREARIQEQRQAEALKAEVRRAEAFRQYQRTLAEPSQFLLARGISEQTLAETKWRTDRHGNAVFPHIREDGKFTGFERKKDGPALYSKSERGIYVANPNCPNPERIKVAEGGTDALSLYQMDTPEQRARTLYVSSGGNPAEDTARALRGLSERTGAKQIDLLYDQDKAGTGHTEMLQKAIAEKAPRLQVEDRRGDYAMREGEDPNDLLRRLQAERQQNAESTQHQEQPRSAAGNRTPSTQPTREAGQDKPSIQEDQAQQQTAQSKLEPAQQTESDQTQDHYQSRGISR*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0033	cloud	direct	high	4472	1.0	GCA_000297075.2_03933
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3934305	3935183	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	31437	32315	GCA_000297075_2_1_3793	GCA_000297075_2_1_3793	-	4686340	.	pfam08751	TrwC relaxase. Relaxases are DNA strand transferases which function during the conjugative cell to cell DNA transfer. TrwC binds to the origin of transfer (oriT) and melts the double helix.	MSIFTLSKFSADSILGRAEYFERDSDSLASLYLGGASEHLALEGKPAKGHYAALMFGNSPVNGESLLSDHRRKCLLSPRSVIGFSTSIGLHKSLSVLYAGLRQDDQKFFLDALIAASRGLFAELEGISFFGSRTGRGGSGYAKGEAIALAYVHCTNRALEPHLHIHVEIPNFCRCADGQWRTLAAAALYDRQADVARLFDKHLVAELGVRLPWLQSRFCSDERGVSIPSISAEVLDAASTRRKEVVEALDHGAETKLEAAYTTRQQKGDISLTGLIEAWRDQFSHSIRALRG*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0034	cloud	direct	high	878	0.999	GCA_000297075.2_03934
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3935185	3935526	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	32317	32658	GCA_000297075_2_1_3794	GCA_000297075_2_1_3794	-	4686340	.	.	hypothetical protein	MSYERKNHTQSMVTGRAQQAFERLARDLRVPKSGVLQAILEAVPTSDLVALVRGELALHTAKTVALEPEAALAVRSEIESALALLGPRIAEASRLGAQRAVVEHLKTLMTVEV*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0035	cloud	direct	high	341	0.997	GCA_000297075.2_03935
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3935827	3936405	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	32959	33537	GCA_000297075_2_1_3795	GCA_000297075_2_1_3795	+	4686340	.	.	hypothetical protein	MTQEKPGTQDPIAKIEEFISEMNRERDALTAKIEAEFERRRAEALAQTRGKKNVRGSATQILLPRLDVLRKATIAGTPITQQKEALEAAGVYVSYNSLRKFIQKYLALEYREFLANSRTTGMPLDQGEAPLSELEQAEIDAFLSGKKPVPAPAKEKSTEHLATQTSTRAAPAKSIRKLKEKADAIDYDEFRE*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0036	cloud	direct	high	578	0.998	GCA_000297075.2_03936
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3936433	3937152	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	33565	34284	GCA_000297075_2_1_3796	GCA_000297075_2_1_3796	+	4686340	.	7NPD_A	ATPase, Chromosome segregation, Bacterial cell	MRIAIVNLGGNQGKTTLAVNLFAPRMPEAKILAVETINAAGGDLGAEVEKLRGEQFSRIYAELAAADDLILDVGASNIEEFLEGLERFEDGHDEVDLFVIPATPAKKERTEAMKTAQMLHELGVSGEKIAFIFNRTSDVEQDFSDVLRFAEKTSVARADAEAFVPESELFTLLADKKLNIAQALADETDWKAQLKTASKSGDKKGFDKAADMVAIKKMARSMDRQLQHVFESLTAPVGA*	hhsuite_tools	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0037	cloud	direct	high	719	0.999	GCA_000297075.2_03937
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3937208	3937834	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	34340	34966	GCA_000297075_2_1_3797	GCA_000297075_2_1_3797	+	4686340	.	.	hypothetical protein	MLRELFEDHYKLADRFEAAAQQISIVERSLHGTEGHQGTTELLLNAAEQCRLGAAAVSQLNVVELAAAVAQLNEQTKALPHQLLRPEESQAFRESLERALLSDTTRILRVAYEAAMKSGCLEAVEHALREMQKRIDTTELEKVTKALNAARQQNSALNNKISLLNSQSVGKLQAAVKWSVTSFFTGIALGTALSMLYLAPQINKFINP*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0038	cloud	direct	high	626	0.998	GCA_000297075.2_03938
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3937889	3938359	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	35021	35491	GCA_000297075_2_1_3798	GCA_000297075_2_1_3798	+	4686340	.	.	hypothetical protein	MSNHDEAGCVCANDKWPHASIENAVVELAKIFIGQASTYQLDSLLSMYELKQPGQIAMYAGLIAATYRIALLEAENRSLRIVTGNLAVDNSIRFFPEVNAFMDAMNSDLRQAQATGRMPKLMHFEQRVRNAETRSKIADAGRALEIEVTKGHSERI*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0039	cloud	direct	high	470	0.998	GCA_000297075.2_03939
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3938361	3938681	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	35493	35813	GCA_000297075_2_1_3799	GCA_000297075_2_1_3799	+	4686340	.	.	hypothetical protein	MKKDIERFFRRAPPEYLKGLLSPINGPSFETRKKQLMIAKSLSDNPYYRLFRLTPPDEISEILRPALKAAWEDVNSIRKRAKALREKNSPSDPEPGDEAQELSRGP*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0040	cloud	direct	high	320	0.997	GCA_000297075.2_03940
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3938665	3939261	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	35797	36393	GCA_000297075_2_1_3800	GCA_000297075_2_1_3800	-	4686340	.	pfam19570	Family of unknown function (DUF6088). This family of proteins is functionally uncharacterized. This family of proteins is found primarily in bacteria. Proteins in this family are typically between 197 and 228 amino acids in length. This family appears to be distantly related to pfam13338 suggesting proteins in this family may be an antitoxin component of a toxin/antitoxin system.	MSHLAENIMSVAQALPEGGMLSPKEFLHLGSRAEINKTLSRLAQEGKLLRVSHGAYVRPHQGRFGVRPPSTESVLQGIEASCGETVVAHGAAEANALGLTTQVPIQEVFLTSGASRTLHFGSRCVALKHGSRWQLLLGKRPAGQVIRALAWLGPEAASAALKELHSRLPEAEWEAVCGARAALPSWMAKVVSEAMAHD*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0041	cloud	direct	high	596	0.998	GCA_000297075.2_03941
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3939323	3939673	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	36455	36805	GCA_000297075_2_1_3801	GCA_000297075_2_1_3801	-	4686340	.	cd16170	DNA-binding domain of the bacterial xenogeneic silencer MvaT. MvaT is a xenogeneic silencer conserved in Pseudomonas which assists in distinguishing foreign from self DNA. It prefers binding to flexible DNA segments with multiple TpA steps, and forms nucleoprotein filaments through cooperative polymerization.	MSKLAEFKRLEAQLAAQLQQLDALKNDAELKKEIQFEEKLRALLAEYEMSLRDVINILDPSPRSTPAVVVQRRQRKIKVYKNPNTGEVVETKGGNHKVLKTWREQYGVETVDSWLQ*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0042	cloud	direct	high	350	0.997	GCA_000297075.2_03942
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3939691	3941106	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	36823	38238	GCA_000297075_2_1_3802	GCA_000297075_2_1_3802	-	4686340	.	pfam19500	Family of unknown function (DUF6035). This family of proteins is functionally uncharacterized. This family of proteins is found in Proteobacteria and Bacteroidetes. Proteins in this family are typically between 425 and 520 amino acids in length. There is a conserved GVD sequence motif. This family contains a PD-(D/E)XK nuclease domain.	MTTVISEIAELTETQKLTEIIDLDTGLSIDLQSFVCRHDREVVKARNELRRRYLVDPESPWLACELCGAAVQLVCHTDRKYYFRHMPEQENRGCPVNTKNKLTPDQILAAKYNGAKESYAHQHLKEIVRDSIIADPNFSSPRLEKIWRSSNFLERASWRKPDVQVEMNGRKLAFEIQLSTTFLSVIVERREFYRAEGGSLIWVFQSFDPSQTRRAEEDIFCNNNMNVFVVSGETLLRSQKDKRFSLDCWYPLPSYKYGLLVHEWCCDQVFFDELTFDVELQRVYHFDYESRLSEMNSQRIADEVFRQRETLRERFESFWLRDDLQYDSEDDEVNSEWMALKNEMRSVGFVGALPNSHWSMPFYGVIALMLSVKYGKPVGYKFKTLLEVTNLAFNSYKKFLRPFGLAIYYYDMDDLLVGQDRKGTWRKRKVTIRQAMVAKDPAYAQTTFFDEAIAFILPKISDKLGVSCWRS*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0043	cloud	direct	high	1415	0.999	GCA_000297075.2_03943
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3941211	3943409	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	38343	40541	GCA_000297075_2_1_3803	GCA_000297075_2_1_3803	-	4686340	.	.	hypothetical protein	MNSFSQLVLSWMFGRWIFDGDQTEIISDNISDVTPLTIFAAAFSQLGLLMFGVLASWAMFLGIFRLKNNGNFFGAKDGNEAFFYPLRVVVALILVAPVVPVSSAGGVPITLTTGHALIAGVSKMAAEFGDTMQHDAFELMHRHNLFSDPQFRVEVDTGVALDMLNSWKLAAAQLAGFAVFQDPSEEKIVAGLTGEQLALVALRNRWNEVYGNTHPAGSGDAQSQAAEAFLSVAGRSLQIPLIAPTDSLAREVTLGASGLIDSGAVDETIGRELETEGWFCQLGWMSSMTCSEEFAQVKANNSASIEAGIAAAQRQIWIQLVSHALNYAKSVQDGGVTQAEHKEYFEKSINWTAQTADWYSKNVEATIANTLAGDQAERAEPYFDEVKSWGWMLGGTFVLRAASDFSRAASYAEGATSKMMPKSSLSALTGGEVLSKVVEQETLAQIQPGNTGSTTKSLLARVFSLDILKETTGPSIQNIHTIAAWGRSLVGTGIGFFAGGKIAQYMPGLSSMTDGALPKSIGALMIIAGGMIGYVMPLLFAAYGLMGAIGWLVAVATTFFGVTLWSAGFAAPKGEEHTSQMSAKGWNALIFIGLYPALAVGGLAAAIVISAIGLAMVQALAMGMWGMFDPGTAEVGRPLESLGGILVGGLLLVGVIILVSWNVVVTSAQLIMTFPRTVLNMISFSEPGLNPYENSPQNLMGGLAMSARQVLTGAISRAITPSRNPSPPQGGG*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0044	cloud	direct	high	2198	1.0	GCA_000297075.2_03944
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3943402	3943938	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	40534	41070	GCA_000297075_2_1_3804	GCA_000297075_2_1_3804	-	4686340	.	.	hypothetical protein	MSKIKTVAAYLTGYAQTKNAVREVKTSVSLPVNFLRGLWEQVQEIRREAAEANALAKKDDKGLWDEMCREYEITTESVRRKYKSALFTNLLLVLGIGLIVGNLLSNLNTGSMVVFANVIFLNFLLMLLFQNAYRLNMAYTQSAPPVMQFLKNILKNPTLLIGRTLPDDYKVRLEAFNE*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0045	cloud	direct	high	536	0.998	GCA_000297075.2_03945
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3943942	3944115	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	41074	41247	GCA_000297075_2_1_3805	GCA_000297075_2_1_3805	-	4686340	.	.	hypothetical protein	MLLKEAQVKIPRAIGVGLIVYFGLVVPGREVVNRVVPIEHVKAVETEIPVPPVSRPR*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0046	cloud	direct	high	173	0.994	GCA_000297075.2_03946
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3944105	3944266	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	41237	41398	GCA_000297075_2_1_3806	GCA_000297075_2_1_3806	-	4686340	.	.	hypothetical protein	MSLPDIQRALAALREIQVKAVELPPSCEHDAHVIAALAVTVEQILSKEIKDAA*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0047	cloud	ambiguous	low	12	0.074	GCA_000297075.2_03946
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3944344	3944772	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	41476	41904	GCA_000297075_2_1_3807	GCA_000297075_2_1_3807	-	4686340	.	.	hypothetical protein	MAIIVKTKIHEGCTGAGVHVQYELKTNPRNLMAAIDEIDSLRERKTSSFGNIGHCGTWIEVDGVSLSVWDEKELSKAYVEEDLNYYRREGGVKPLNRTQRAEKMISSIASGELLADRKASAEWVEKELQTEMDAWDQQPEMC*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0048	cloud	direct	high	428	0.998	GCA_000297075.2_03947
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3945037	3946362	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	42169	43494	GCA_000297075_2_1_3808	GCA_000297075_2_1_3808	-	4686340	.	PDB:6AR3_D	Reverse-transcriptase	MTPDSAEVSAASVTWTNAEPDMLMERVLAPANLERAYQRVVSNKGAPGADGMTVADLAGYVKQYWPILKARLLAGEYHPQVVRSVEIPKPQGGMRQLGIPSVMDRLIQQALLQQLTPIFDPLFSDYSYGFRPGRSAHQAVEMARVHVAVGHRWCVELDLEKFFDRVNHDILMACVERHVEDKRVLRLIRRYLEAGVMSGGVVSHRQEGTPQGGPLSPLLSNILLDELDRELERRGHRFVRYADDANIYVRSPRAGERVLASVERFLNHRLKLRLNRDKSRVAGSWKCDYLGYGMSWHRQPRLRVATMSLRRVRDRLRELLRGVRGHKMANVIERINPVLRGWAGYFKLSQSKRPFEELDGWVRHKLRCVVWRQWKQPSTRARNLMRLGLGEERAYKSAFNGRGPWWNSGAPHMNQALPKKLWDRLGLVSILDPINRLNRMA*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0049	persistent	direct	high	1325	0.999	GCA_000297075.2_03949
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3946935	3947357	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	44067	44489	GCA_000297075_2_1_3809	GCA_000297075_2_1_3809	-	4686340	.	.	hypothetical protein	MKIKIALVAIAFAVLVGCGESKENKIMPQAATTDAVYSEKASRYLEEVIGTPKKAKRIEMTFWHETDRKGVGYLSLVVDGVEMIRPIDNIGGYSAASSQGFKFIYEGGAWKAYVAEAEKNTHGEHPQEFFDKTTGILRKY*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0050	cloud	direct	high	422	0.998	GCA_000297075.2_03952
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3947371	3947871	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	44503	45003	GCA_000297075_2_1_3810	GCA_000297075_2_1_3810	-	4686340	.	cd16385	IcmL	MNRLKAALAAAVILLATAQVEAASEPHPVPLLKFHRDCVIKAFELNYGSFQRQLQDLHVACMTDRAYIDWRSSLERAGYIDQLKNGKNKLVLAANVGAGAVISEGMRELASKKRYTATIKSPVQVVLNGDTSRSRNGYIETDVIRVRQSDRIVGYAIHAIRLNIKK*	hhsuite_tools	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0051	cloud	direct	high	500	0.998	GCA_000297075.2_03953
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3947873	3948301	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	45005	45433	GCA_000297075_2_1_3811	GCA_000297075_2_1_3811	-	4686340	.	.	hypothetical protein	MNFFDDDVLDQLDLNELEIMRERAHHFLSRVQFQVELKNSTARPLSRFTFQESGFVFYAEKVEDGVLINPALPPNFGNRDISTRPSEELERWSCRPYIETREVPSGTRYIVHCLDGGAWDRPTDWGSFASLNDALVCISERC*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0052	cloud	direct	high	428	0.998	GCA_000297075.2_03954
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3948724	3949338	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	45856	46470	GCA_000297075_2_1_3812	GCA_000297075_2_1_3812	+	4686340	.	pfam05857	TraX protein. This family consists of several bacterial TraX proteins. TraX is responsible for the amino-terminal acetylation of F-pilin subunits.	MRTIGRLAFPLFCLAIAANAYRQPIGYSGGLKYLGGILLFALISQQPYSRFFESNYLNILFTLGLGLVIAQAVHHRTPSLITAGVVALAVAAAYRPILSYGLAGVLLPTALLAALQARVIETRIVTWSTAALIAVLANTGAGIMLLPDLPARALASISAAALAPLLGLALLQFRLRSIRPVGTWMYPIYPIHMLLLNSLSITWA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0053	cloud	ambiguous	low	185	0.301	GCA_000297075.2_03955
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3949947	3950147	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	47079	47279	GCA_000297075_2_1_3813	GCA_000297075_2_1_3813	+	4686340	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MKNQKRQPLSTVAEICEYLHIGKTTFYRLAATPGFPEAIRFNQRVVRYELTKVIDFIKSDTLKESA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0054	cloud	direct	high	200	0.995	GCA_000297075.2_03956
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3950342	3951646	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	47474	48778	GCA_000297075_2_1_3814	GCA_000297075_2_1_3814	-	4686340	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MLPEKLHFSPLSRRLVEASFTGGHITSDAGLLLLREVDQQHGLTRRLAKIVPDRRDPGRVQHGLQTLLAQRICALAAGYEDLNDHDGLRHDYALQTAVNRLQPLAGKSTLGRLEQQADRETVVQAHRLLWEHFIAQHDQAPAEIVLDFDATDVPVHGDQEGRFFHGYNDHYCFLPLYVFCGRHLLVSYLRPSNIDXARHSWAILALLVKFIRRFWPETRIVFRGDGGFCRXRMLDWCDRKQVDYVVGLARNTRLQRXAAPAMQAVAEAYQETGQXMSGVYRFLYQAGSWRRRRLVVSRLEHGEQGANPRFIVVSRFAEDAAQQYYEDYCGRGDMENRIKDQQLDLFADRTSSPRWWTNQWRLMLSAXAYVLFEXLRDHLQGTALARMSIHNLRLKLLKIGAVIIRNSRRIRVLISEAYPHQELFAGLVARLKPT*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0055	cloud	direct	high	1304	0.999	GCA_000297075.2_03957
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3952069	3952683	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	49201	49815	GCA_000297075_2_1_3815	GCA_000297075_2_1_3815	+	4686340	.	PFAM:PF10134.8	Replication-initiation-factor	MFDNDVYLEIIRLAQGRAPGEKILFNRHSFLRALGISGGKNNYDALHQSLQKLKGNTIKITNFKTGYDAFSLIDQLSWDEEVGYWRFSIGDIVIEMLSTELSYIDLDIRKSLTTPLSKYLQNYMSAGLPGEREVKVDNLMRLSGTTSQLKDFLGKGRGLTKALDELKAVGFLASYAIHKNKNGDHIVRWNRTAHQNSRRHASGI*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0056	cloud	ambiguous	low	3	0.005	GCA_000297075.2_03958
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3952680	3954005	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	49812	51137	GCA_000297075_2_1_3816	GCA_000297075_2_1_3816	-	4686340	.	PDB:1Z19_B	Integrase	MAGTVNEQKLRGMKPGGGKLTESLPGRGMGSLIFKRQGETPPMAFYRYRLDGKDSLIKIGVCKLSPRGIGLTLPEIRERARELAKVAVEHGDVRAHLEDLENQAELARIEREREINALRVQGSFEELFREYIEDRRGKVRDDQVSEYERILKVDLLEAHAQVLALRASEVRPQHIRQILETIWNRGATRQADKVRSFLRAAFQYGMTAEHSLGRSSSKNYSIDSNPVDAVLVPSTSKPGTRALSDTELKHFWATITETDGIGPVISRLFQFVIALGGQRIEQVAREPWSSYDRESRTLRLVDRKGRGEVERIHLVPLTDRALELLEQVEAITGGFEWPWTSYGKKPFATTSFAHAIRDWLGSKHGKIDDEQIPHFTPRDLRRTCAQLMQRNGVDDRLSDLLQSHGQTGVVGQHYRNNPEAYLPEKLKAMAGFEAALSKVLD*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0057	cloud	direct	high	1325	0.999	GCA_000297075.2_03958
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3954386	3956563	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	51518	53695	GCA_000297075_2_1_3817	GCA_000297075_2_1_3817	-	4686340	.	PFAM:PF13550.5	Putative-phage-tail-protein	MGAKPKSQTVGRRYYYDIHMGLGLPLDEIVEIQASDKRAWRGSITSNGQIYINAPNLFGGDAGEGGLQGTIDVLFGEENQPVLPRLAAMLGGLVPAFRGITTAFYSGLVTSMNPRPFPWKILRRGGNRLWGADGAWYPERQFIWLADNQIKAMNGAHILYCMYTSPRLRRRLPRVRMDDAAWRAAADRLYSEQLGLCLEWKRSAPFKEFREAVLAHIGAEVFVDRRTALLSIRLIRDDYNVEDLDLFDEDSGLLEIIEDEASSNSSTSVPSELVVSYVDAIDGKKKHVRVVNSAVAARDGGRSSESIEYFGAPTGEIAGRLALRDLRVKTAGLKRYKVVLDRRGRDITPGKPFRVRSLRRGIAEIVVRAGRCEDGPLTSGRITVTALQDVFGLPVASYVAVPPAGWLPPDRTPYAVAVRRLMEVPYRELAGIIDPANLELLDPTAAYMAALAVAPTSLSFSYTLTNRVGSSGPFAIRESGDWCPSALLVSAMPQEPGPTAVSLTSATRLGDVRVGMAALVGEEIVRVDAVNYETAVVTLARGCADTVPTLHAAGARVWFYDEYEGIDETAYTQGVTLQARLLTNTSEGQLDPALAGTDSIALQGRQGRPYPPGQFRIGGVNYPASVEGGVVLSWAHRDRLGQADQLIDTTMGNIGPEAGTTYSCRLLRADNSAQLAIHAGLSDTTATLVTTYEGQVIAELWSVRGGLQSIQRQRWQFEHTNPPPP*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0058	cloud	direct	high	2177	1.0	GCA_000297075.2_03959
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3956553	3956768	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	53685	53900	GCA_000297075_2_1_3818	GCA_000297075_2_1_3818	-	4686340	.	.	hypothetical protein	MIVTIQHLHTVPTWTTRQGYCHRQARAWFVARGLDWGHFLREGIDEQILLDSGDALAIRLVEHAREVNDGC*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0059	cloud	direct	high	215	0.995	GCA_000297075.2_03960
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3956765	3956995	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	53897	54127	GCA_000297075_2_1_3819	GCA_000297075_2_1_3819	-	4686340	.	.	hypothetical protein	MWLQVAILVGTYLLSSARAAKAKPPRPAAFEEIDFPVCEEGEEQTAVFGQVWSESWMVLTVGNHRTSAIKVKGSKK*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0060	cloud	direct	high	230	0.996	GCA_000297075.2_03961
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3957004	3957825	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	54136	54957	GCA_000297075_2_1_3820	GCA_000297075_2_1_3820	-	4686340	.	PFAM:PF05100.11	minor-tail-protein-	MSSASRELSLADGQPIRLYQFSRGVLRWSYTSADRNITYNNQVFRSVRGGIGDPGIIQSGDPQADRLVITAPADLEVALLYKGAPPSDEIGLTVFDLHYGEADAWVSWAGSIATVNWPALDRCRITCLSIEASMDAPGLTDVYSRTCTAVLGDTECKVDLNQYRVTTNLQSMTGASVFSGTFAEYPDGWFSGGHIEWPIGSGEYDRRHIERHIGSELLLLGGTAGVPPGGSVRTYPGCDGLDTTCAGKFSNIDNMRAQPHLQGSSPFDGNQVW*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0061	cloud	direct	high	821	0.999	GCA_000297075.2_03962
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3957812	3959527	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	54944	56659	GCA_000297075_2_1_3821	GCA_000297075_2_1_3821	-	4686340	.	PFAM:PF02011.14	tail-assembly-protein	MAVLSGQSVRPILGGIDNPNLTTDHWAFAWVNQFAPSPYVSDTQRAGQAPLTTHWPVAANGRSLSGQRRRAHVDDWYHRIHISPQQLDLGNVVSAQTTPIYLWNAFLEPRTLTTIQGLEEGIEVGGQPSPPMLFPALAEKVWQVSVTPDGQPVLDTTLGWAFDNGALASLRITANRIVAWSFAPDWGSSIRELLEWLTDILTSESLVEQRRALRLSPRRQFEAALYVEGRERQLLDLALFGWGTRVWALPIWPDIQLLAAPVPAGSQRIDCDTQHLDFAAGGIAMLRGEDAFTFEVVEIESVDASGLDLNREIQQSWPVGSRLYPARPAQLAEQPTLRRLTDTVQSAEVRFLVLEPSVWPDVMPAGLYRGRPVFDTRPDESEDLTGSYARLLASLDSGLSLPLVTDVAGRAMPVQEHRWLDMGRATRAAYRSLLYALRGRQRAIWLPTHADDMTAVATITSVATTIDIEAIGYTRFGQARPGRWDIRIELWDDTVFHRRITGATELSADIERLALDSALGQQVEPSDIRRISWLVLCRLDVDQVEIEHITDSEGVAASSLIFRGVRDDEFS*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0062	cloud	direct	high	1715	0.999	GCA_000297075.2_03963
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3959530	3960411	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	56662	57543	GCA_000297075_2_1_3822	GCA_000297075_2_1_3822	-	4686340	.	.	hypothetical protein	MAFYSGSANDMAAVRTALVDACVTEGWSWNSGTEVLSKGAMFLRLQIVSGYLTLLGRTSAGAGDAPSIVRMGQMGTAITWPVEYTFFVFDAEVYCVIKFGVDFYLWCAFGQSTVAGLPGTGMWVAASVHAIANHNPAISPIDGPKSSFSYGCAAIFWRTSAGAVAGGHDYWVHSDLDDQGWWSGQSVGAAPAGIQPAVPLIGVLPNSWNSEAVLLPIRAYKFRPSNRLSLTADLEHARYTRVDNYSPGEVIQIGDERWMVLPFYRKDSANRNGSSQPAAHTGTFGWAIRYEGP*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0063	cloud	direct	high	881	0.999	GCA_000297075.2_03964
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3960411	3961268	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	57543	58400	GCA_000297075_2_1_3823	GCA_000297075_2_1_3823	-	4686340	.	.	hypothetical protein	MPHDIDFVDNSGGTLAHYKMLERIRDFAADNGWTVLRYDTAPANRELILKGVGFSEEEEIFVGFRTYQDAGADYYNLLAGVFTGYVPGNTFDTQPGARLSGVPAHNNRIDYWLTLNPQRIALAMKVGTPVYESAYVGKMLPYGRPSQYPYPVVCGGMLTGAAATRFSDTGHSGYFKGNRQGMGLRSNDNWLLPRCYPWGNGYIAGNATSANDTNLRDTGGIYHLLPVELHDNSANLWGALDGVFYISGFDNAVENTLTVEGVDYVVIQDVWRTGHTDYYALRMDD*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0064	cloud	direct	high	857	0.999	GCA_000297075.2_03965
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3961272	3964898	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	58404	62030	GCA_000297075_2_1_3824	GCA_000297075_2_1_3824	-	4686340	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MANNGNLQLALRVQADLKQAVDALKQLDAGLDGVSSSAQSSTSAASTTGAALDRAGDAARSAAREGERYAVAAGRVASQSEVAARSLDQVTQKAGQGDLALSRMAKSIGAVAGSFIGLQALSKGIAMVDDYGQMADRIQMATESAAEYDQVQSRLLETAKATYRPLAEAQELYISTADALRSLNYTTSDSLDITDSFSYLLVTNAASADKANSAISAYAKAIQTGKVSSDQWQSLLGAMPTLVNAIAEATGKSTEEIRKLGIEGKLALDDLNESLRKSLEANKKAADGMGTTVADAMMRLSTGLTAYLGEANRSTELTATMAKAIDLLGENIETVANLFGVLAAGAMARYGAQLAVVTKGKLADVLASRAQIAEELRLAQAQVASTATAVNAARANVGLSGSHGQVATAIAAHEAATRRLAAAQAAAGTASRALMGFLGGPAGIAMLAASAAASFFLFRDSAEEAKVSLDDLSLSVEEYGRKWAEASKEQRRAMLDTTRQQLQQVQADINDSISKIDAALNNLASAGQVPINLVIQAMGDLRTAAENGGAGIDDVVQSIADLLPVGHQARSELTQLAGQLSTQTQSVTTLSERMGEFTGRLDDNTDALRRNSDELGRGSKEADEYLEKLRGRTAELLDPSAVGRAKRDLVSLKDATLDQVSAILAEAAAQDQLLEARNKTKSSRSTAETEAQRQAKASESYVRGLERQAALLGLNAAEVRAYEVAEKGLAGALLARAQAANELISAEERKRQSDANARTNADLEAEFLRSVGRDVDAGLLEIRTKFDAMRVEFERAGNEAGLAWLDKLIPVAEAKVRVDDVQRQMEKILEEQRRQESSVNVQQDAGLLTELQARERILQIHRQTYDQLQQIRPVLEEMARQPGAVGEAAANALAALDEQAQRLQVTTTLLAETLRDGLTTGFTDALTGLAKGTMDLRDAITALADGVLDAMVRMAAENLAQSATNGLMGMFTGITEAAPQAIAAVQQTASAQQAAITAVQTTQMAADTAMATSSATAAATTATAQAGAAATTTAAWTPAAITASIGSFGAAAAIGLAAVMAALAFKAFAGGGHVRGPGTTTSDSIPALLSDQEFVTRAAVVQQPGALPFLSDFNERGMVALDDWATRVRHATGGLAGVPAPAMPSPGLGASRLAEPASSMIQNSQTFNLIDSPERIASVLQTRAGEDALTVVLSRDPAKFRSILHLDR*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0065	cloud	direct	high	3626	1.0	GCA_000297075.2_03966
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3965030	3965524	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	62162	62656	GCA_000297075_2_1_3825	GCA_000297075_2_1_3825	-	4686340	.	PFAM:PF10109.8	tail-assembly-chaperone	MTKRRVKPQQPDDSLEVLFPDRPLTVGGRDLVVRELGFEEQMHNNHLLKPIADAFCQIPPQVLASPDSINQVLDLLAAHWDNVRELVAISCGQPLKWVKALPPADGEALVLTWWTANQGFFVRRLWRPALLAQARKAPAGAESSPASSPQATTGTSSAATPSGS*	phrogs_hmm	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0066	cloud	direct	high	494	0.998	GCA_000297075.2_03967
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3965528	3966304	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	62660	63436	GCA_000297075_2_1_3826	GCA_000297075_2_1_3826	-	4686340	.	Uniprot:A0A0B4ZXN7_9CAUD	major-tail-protein	MAQQETYYYGQGKLKLAIIAANGTLGPWRWVGDVSALSGAMQEETVSHDESYSGKKVKVREFGIRPQLTMSATLHSLDTENLAMYSQGTASSTAAGTASGEALPTGLQAGDEVVLANPGVSDLVITDSSGTPATLDEEHYLLDPAFGNLQIVSLPTSPAPTQPFIAAYEYAARKQVTLLSAASRPNVALRYEGINLAEGGAPVIMELYKLSPGLLQELSMITDGNTVAGMPVSFSALLDTSKPANGPMGQFGRIIQVG*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0067	cloud	direct	high	776	0.999	GCA_000297075.2_03968
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3966330	3966533	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	63462	63665	GCA_000297075_2_1_3827	GCA_000297075_2_1_3827	-	4686340	.	.	hypothetical protein	METVKVTITAKNPNHTHAGKPCKQGDEIDVSRAAAQFLLRKKLIDKIPGKASKASDTPTPAEAGSDK*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0068	cloud	direct	high	203	0.995	GCA_000297075.2_03969
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3966521	3966994	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	63653	64126	GCA_000297075_2_1_3828	GCA_000297075_2_1_3828	-	4686340	.	PDB:2GJV_C	tail-completion-protein	MSDSDDYLFLEPLLVERIRAQVPGLADVLAIPDLASLDEDGQVSPSVYVVYLGDDTGSGAPHQGGARKIQTVTQNWAAVLHVYYADATGRGEGARREAGPLLGKLLTELTGWMPDGCTTPLARAPRQAPVAYSNGHFYYPLVFEASFVYPRLKTWKP*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0069	cloud	direct	high	473	0.998	GCA_000297075.2_03970
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3966991	3967407	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	64123	64539	GCA_000297075_2_1_3829	GCA_000297075_2_1_3829	-	4686340	.	CDD:cd08053	head-to-tail-adaptor	MSYCTQADLVETYGEQEIRQLSDRVNKPAQEIDVAVVGRAITDADAEVDLHLQARYQLPLASVPVVLKRIACSLAYANLHTRLSEDHPAHLAAERSRKLLGGIASGKLALGFDAEGAPAPLANTVQISESRNDWGAKW*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0070	cloud	direct	high	416	0.998	GCA_000297075.2_03971
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3967414	3967665	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	64546	64797	GCA_000297075_2_1_3830	GCA_000297075_2_1_3830	-	4686340	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MSTAATSKKTIKQNETKAQDVAGGEIEGVYVRSISERRCRAGFCFDRDGQGFAKGVLTDAQLAVLEADPLLKVEHCTFPAESE*	hhsuite_tools	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0071	cloud	direct	high	251	0.996	GCA_000297075.2_03972
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3967726	3968640	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	64858	65772	GCA_000297075_2_1_3831	GCA_000297075_2_1_3831	-	4686340	.	PFAM:PF10124.8	major-capsid-subunit-gpT	MAIITPALISALKTSFQKHFQDALAIAPSAYLQIATVIQSTTASNTYGWLGQFPKLREWIGDRVVKDMAAQGYQISNKLFESTVGVKRTDIEDDNLGIYTPLMQEMGRAAGVHPDELVFALLKLGHSSLCYDGQFFFDTDHPVFPNVDGTGTPATISNSFAPAENPGAAWYLLDTSRSLKPLIFQERIKPAFQSMTTEDDEKVFTADEYRYGVRSRCNVGFGFWQLAARSTEPLNKANFEKVYDAMRGLQADGGRPLDVRPNLLVVPTTLRGAAKEVVGVERLANGATNPNYDLVQVLDTAWLN*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0072	cloud	direct	high	914	0.999	GCA_000297075.2_03973
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3968646	3969746	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	65778	66878	GCA_000297075_2_1_3832	GCA_000297075_2_1_3832	-	4686340	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MKKNRPQVAIAACSFQLPKLEDGSVWIQFTPAGEFRPMDGRPMDVPAWRIDAASAAVVIARFQARRTPPVLDYEHQTLKKEQNGQPAPAAGRLLELEWREGSGLWARVELTARAAAMIEAGEYLYFSPVFAYGSDGTVLAVLMGALTNDPAIDNMEPLARRAAATFGLFDPEEEAPVELLKAIIAALALKAEATEAEAIAALTALKPALDAQAKTLAELRSALGLTTDATGEQIAAATAQLKTAASSAGNPDPTKFVPLAAMTELQGQMAALTARLNGGELDGLVGTALKDGRLLPSLEGWARELGGKDIGQLKAYLDNAAPIAALTRLQGDRVPQGDTHNLTVAELEAAKLTGISAADYAKAKGA*	mmseqs_cdd	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0073	cloud	direct	high	1100	0.999	GCA_000297075.2_03974
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3969969	3970577	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	67101	67709	GCA_000297075_2_1_3833	GCA_000297075_2_1_3833	-	4686340	.	PFAM:PF05069.12	virion-morphogenesis-protein	MANRIEVQVIDAPVRQRVDQVLSVLTDSGVLMRGIAAELTAQTELAFQDEGPGWPQLKPATVKARARTGRGAHPILQVSNALARSITSQAGADFAQVGSNMPYAAIHQFGGTIERAPYSGKLRLRTDRKGQLLRRGKNGKLVTFAKEKGPRAHKNYVERRYEVKAHKIEIPARPYLPVTPSGLLTPRASDAIMELLTGLLMR*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0074	cloud	direct	high	608	0.998	GCA_000297075.2_03975
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3970697	3972028	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	67829	69160	GCA_000297075_2_1_3834	GCA_000297075_2_1_3834	-	4686340	.	PFAM:PF04233.13	minor-capsid-component	MPTPTEADLRAIIQLRPDAAIEYLERKGFAITWNWHDVSAASHARAFTVAKAARLDVLQDIRNALGDNLEKGQTLRDFQRNLRPTLEAKGWWGRQIVVSPDGGAESAQLGSPRRLATIYQTNMQSAYMAGRYAAAYEARETHPYWMYIAVMDGVTRPSHAALHGKVFRWDDPIWQHITPPNGYNCRCRIVALSEAEVQRRGLKVESSAGKLGTETLEAGIDQRTGEIRSETVTTLDTTDRAGKRVRFRPDPGFDGSPVQSHLMDDVLLRKAQRTLGEPAALAEVQQVLLDPVRQKGWEAYIDNAIALGRPQGQSMAFGVLDAADLVFAQGKGAQVQSGIVFMSDARLAGAKVRRHQAAGDALSAAELKALPEQIARPQQVLWDTKNKTLLYILAGGTERAKLAVRFNRESYGKVKVDDAATVFKVAMQDIASGLNGGLYEVVR*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0075	cloud	direct	high	1331	0.999	GCA_000297075.2_03976
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3972030	3973613	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	69162	70745	GCA_000297075_2_1_3835	GCA_000297075_2_1_3835	-	4686340	.	PDB:5NGD_C	Portal-protein	MTRIVDVHGNPIKTAELRHAQTSRLGALHREFAQHPARGLTPARLARILQDAEQGNLQAQAELFMDMEERDGHLYAEVAKRKRAVLGLDWTVEPPRNPTAAEQADADYLHELLQDLDGWDDMLLDALDGIGHGFAAVELEWLLYGREWMPKAMHHRPQSWFQLNPNDQAELRLRDNSAEGEALQPFGWIVHRPRARSGYVARSGLFRVLAWPYLFKHYATADLAEMLEICGIPIRLGKYPGGTPDDEKATLLRAVTGLGHAAAGIIPETMSIEFQQAAQGTSEPFLAMMRQCDDSISKAVLGGTLTSNTSESGGGAFALGKVHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGNPDTRRAPRLVFDLREVADMAAMATALPPLVNIGVQVPVNWAQERLGIPAPAEGEAVLRPAQATPAMLTGRHGGRVASLAQVLGPRYADQQALDKAMAALPAELLQQQADAMLSPLLDAINRGGSEAELLGALAEAFPDMDESELTEALHRLLFAADTWGRLHGNLDRIG*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0076	cloud	direct	high	1583	0.999	GCA_000297075.2_03977
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3973610	3973798	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	70742	70930	GCA_000297075_2_1_3836	GCA_000297075_2_1_3836	-	4686340	.	.	hypothetical protein	MRCELLITGCRDHQMWYSHLVGQRVPLLAIEPDCYLSREPAGFTNMVYKQDAEVVPAQEYDK*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0077	cloud	direct	high	188	0.995	GCA_000297075.2_03978
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3973795	3975444	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	70927	72576	GCA_000297075_2_1_3837	GCA_000297075_2_1_3837	-	4686340	.	PDB:4BIL_D	Large-Terminase	MKTSTKSFLADIAQLAADFRRQIEAEVDGFDPNPAASRERRERAWNDYEYFARTYFPHYVKKGNALLHDYLYQRLPALVDSPDGQHEAIAAPRGNAKSTLVSQIGVIWCVVTGRKRYPLIIMDAFEQAATMLEAIKAELEFNPRLLMDFPEAAGKGRVWQVGTVVTANDAKIQVFGSGKRMRGLRHGPHRPDLVIGDDLENDENVRSPEQRDKLQAWLTKTVLSLGAADDTMDVLIIGTILHYDSVLSRLLNNPLWKRRKFKAIIEWPHRMDLWEKWEEILLNDGEDAARAYYDERAQTMEEGAVICWPDGQPLYKLMVKRARDGRAAFDSEQQNDPVQGDNAPFAACITFWVNRLSQWLFYGACDPSLGKHGSSRDPSAILVGGFNRETGILDVVEASIRKRLPDKIIEDVIAFHKAYRCLVWGVEAVQFQEFLRTELVKRSALAGFPVPARAITPHSDKLLRIESLQPHMANGLIRIHASHSTLEQQLRHFPAADHDDGPDALHMLWMLATTGAARMEFTPAPSRHQTGSGGYGDDRSSGGRFGGAW*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0078	cloud	direct	high	1649	0.999	GCA_000297075.2_03979
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3975477	3975983	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	72609	73115	GCA_000297075_2_1_3838	GCA_000297075_2_1_3838	+	4686340	.	.	hypothetical protein	MMDAISGALTAVSSLMTLSKDISNAKTDHEIAVKTGELNERLGGALQQLITAQTGYLALLNEKGELEAELLKIKDWAHEKQRYQLHKTEAGGLLYRIKPEMQGAEPEHEICANCYENGIKSLLQSAPDANWHLMLACHRCNSLVKVKRYPAPTPTVRRVTRSSRFDGF*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0079	cloud	direct	high	506	0.998	GCA_000297075.2_03980
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3975985	3976485	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	73117	73617	GCA_000297075_2_1_3839	GCA_000297075_2_1_3839	-	4686340	.	pfam08822	Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	MAHPKETRDGVRRAYVFDRQSLEVAAAMHGVSYGTARRWKQQAQAAGDDWDKSQSAQLLAGGGIEDVARQVLSGLVTQFQATMEAVQADQDIKPAAKVQMLASLADAYNKTVSASKRVLPETSALATAMEVLQKLASFIRERFPQHAPAFAEVLEPFGELVARELG*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0080	cloud	direct	high	500	0.998	GCA_000297075.2_03981
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3976495	3976686	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	73627	73818	GCA_000297075_2_1_3840	GCA_000297075_2_1_3840	-	4686340	.	.	hypothetical protein	MAKDEKEETSLQLLQRIDKRLERFEDRFPQVERKGVMYGAAAGALSGGLVACGLLVARIKLGI*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0081	cloud	direct	high	191	0.995	GCA_000297075.2_03982
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3976793	3977197	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	73925	74329	GCA_000297075_2_1_3841	GCA_000297075_2_1_3841	-	4686340	.	PFAM:PF10828.7	Rz-like-spanin	MSLRLILSTLLAAALALLGAWGAGHVAGQAAGAAACAEGQAEGYRDLLDESAKQLHQAQATSTELFKRLARQHTHDEKTTQELRDALAETAADRTACRFAAGVMQQLEDARQRAARATTGGLDATLPPAGGDGG*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0082	cloud	direct	high	404	0.998	GCA_000297075.2_03983
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3977194	3977451	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	74326	74583	GCA_000297075_2_1_3842	GCA_000297075_2_1_3842	-	4686340	.	.	hypothetical protein	MNRENGLGLLSEDEVELIRSRRLENAKKAEAAALRLRILRAAVSYEAWFQEHERGSTYSTFTNEFGGDSSLWDSVEFLRDVVGSQ*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0083	cloud	direct	high	257	0.996	GCA_000297075.2_03984
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3977448	3977876	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	74580	75008	GCA_000297075_2_1_3843	GCA_000297075_2_1_3843	-	4686340	.	CDD:PHA02564	virion-protein	MQTQPRGIRNNNPGNIDYNPRNNWQGQLPRDVKIEPRFACFDTAFNGIRALAKLLVNYRKIHGLRTVEGLISRWAPSNENDTKAYAHAVAAHLGVPIQAGIHLDQDTLEKLVTAIIRHENGQQPYSAELIASAVQAVQAVLA*	hallmark_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0084	cloud	direct	high	428	0.998	GCA_000297075.2_03985
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3977878	3978354	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	75010	75486	GCA_000297075_2_1_3844	GCA_000297075_2_1_3844	-	4686340	.	.	hypothetical protein	MRTYPHCAQPSRTRKERPMPEPGTTTVAASGALLKYFGLHIGAGALAATLGFLVLWPRSMREGFARLFCTIVASSVFGPVLVVQMHAARPELFASAEAVAALYGLEPALGLLFVATPLLVIAGLPAWWLIGAALRFFERDGDSWLGVLAQRLKRKLES*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0085	cloud	direct	high	476	0.998	GCA_000297075.2_03986
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3978293	3978640	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	75425	75772	GCA_000297075_2_1_3845	GCA_000297075_2_1_3845	-	4686340	.	.	hypothetical protein	MDTQTPHPPRSPRDYAAAILAEPSRERRNALLEACPAEWRDLVREHVQAAFAKVKAYRDHKAGRAQLARQKPPAAPRRDALHKPSNYTRSAPEVGNAHLSALRAAVAHPQGTPHA*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0086	cloud	direct	high	347	0.997	GCA_000297075.2_03987
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3978711	3978995	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	75843	76127	GCA_000297075_2_1_3846	GCA_000297075_2_1_3846	-	4686340	.	.	hypothetical protein	MNRTVGAAFLVLGTMAMPAYSASCDDIETVAKTFAEGRYKGHPVSAYMKHVESTPALKQLLIDAYSLPDYHSDQMQQKAVSEFVNRTYIQCVQE*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0087	cloud	direct	high	284	0.996	GCA_000297075.2_03988
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3979046	3979246	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	76178	76378	GCA_000297075_2_1_3847	GCA_000297075_2_1_3847	-	4686340	.	.	hypothetical protein	MLTPEAQRHLERLDTIGRCWTAVTDLMVPEKDLHVVDRDTLSCLFNFLAEEYDKARQGFTEALKDR*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0088	cloud	direct	high	200	0.995	GCA_000297075.2_03989
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3979377	3979808	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	76509	76940	GCA_000297075_2_1_3848	GCA_000297075_2_1_3848	-	4686340	.	COG5566	Transcriptional regulator, Middle operon regulator (Mor) family [Transcription]. 	MDLSQLQELLPENVRDMAARIGLPATLRVVERMGGTTWRVAEGRTPEGEAKRAALADIVGSDIEEMLHREYAGDEFYLARCHAAVLRWRNLEIHQRFEQGVREGLTARTLVAELAREYRLSDRRVWIILKEHLPPVEQGTLFH*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0089	cloud	direct	high	431	0.998	GCA_000297075.2_03990
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3979808	3980203	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	76940	77335	GCA_000297075_2_1_3849	GCA_000297075_2_1_3849	-	4686340	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MSLAKIHIAKAQLGLDDATYRALLARVAGVRSAKDLDRRQAAAVLAEFERLGFKPQPAKKQGRARPNPAGSRKTVMRKVEALLTEARRPWSYADSMALHMFKVARVEWLDDSQLQRLMQALIIDAGRHGRL*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0090	cloud	direct	high	395	0.997	GCA_000297075.2_03991
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3980200	3980397	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	77332	77529	GCA_000297075_2_1_3850	GCA_000297075_2_1_3850	-	4686340	.	PFAM:PF05315.10	endonuclease-VII	MSTLQQATLPKQRVTWYAIERYCPRCEEYWPADEEFFHPRPGGKLDSWCRACSNEYRRLKRMTTQ*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0091	cloud	direct	high	197	0.995	GCA_000297075.2_03992
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3980394	3980675	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	77526	77807	GCA_000297075_2_1_3851	GCA_000297075_2_1_3851	-	4686340	.	PFAM:PF10723.8	transcriptional-regulator	MTEESQIERKRRQARERKTAQRKRDRERRTLVGAHEFRMDMYQGTTEALERICAAGQFEEGVEAITLLLHNVAELAERDQSRFKELIKMRCHA*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0092	cloud	direct	high	281	0.996	GCA_000297075.2_03993
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3980748	3981419	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	77880	78551	GCA_000297075_2_1_3852	GCA_000297075_2_1_3852	-	4686340	.	PF10979.8	Protein of unknown function (DUF2786)	MDHKKALDKIKKLLRLANSSNPHEAAAAMRQARALMEKHQLDQTDVDIADIEEHGTRSGSKMKPALWESRLAQTVAKAYSCRLFFKAGVGDWRFVGEMAEVASYTLAVLLRQVRQARRDYIAQNLKRCKSASKTKRADQFCSGWVYAVYTKVAEFAGTEPSGATDAYMLKHHPDLVDGKAIDRTAKTKSLSLRAINDTAAGIQAADSVQLNHGVGGQEQLALT*	hhsuite_tools	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0093	cloud	direct	high	671	0.999	GCA_000297075.2_03995
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3981499	3981717	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	78631	78849	GCA_000297075_2_1_3853	GCA_000297075_2_1_3853	-	4686340	.	.	hypothetical protein	MTEHSFTVTVAEGESGINIQVGGIQPFEGVDSNALEIAKALRLTMLQNTNRLAECIATARHQHIHPATKSVH*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0094	cloud	direct	high	218	0.995	GCA_000297075.2_03997
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3981719	3982003	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	78851	79135	GCA_000297075_2_1_3854	GCA_000297075_2_1_3854	-	4686340	.	.	hypothetical protein	MAKTYAVCQINGLIRFVDQPPAEGHISLAVGELGVVRQVIRETAEPVPAPRGSIAHRVPGVDPDTAERANLGAIARYIQTLNQHDVPGFRALGA*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0095	cloud	direct	high	284	0.996	GCA_000297075.2_03998
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3982005	3982643	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	79137	79775	GCA_000297075_2_1_3855	GCA_000297075_2_1_3855	-	4686340	.	pfam11363	Protein of unknown function (DUF3164). This family of proteins has no known function.	MNAHTQPIPEGYRRDAQGRLVHESMIKPIDQERDRLVMHLVDRASELSNELADFKGMAFGDVRAFIEMSFEEYGAKIGGKKGNVTLHGFDGRYKVQISVQETTAFDERLQAARALIDECLAEWTQGARPEVVTLVNDAFRTDTKGEIRTARVLALHRLEIADERWQRAMKAISDSCQAVGSKSYLRFYERVGDSDQYRPISLDIAAIALPEA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0096	cloud	direct	high	638	0.998	GCA_000297075.2_03999
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3982659	3982964	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	79791	80096	GCA_000297075_2_1_3856	GCA_000297075_2_1_3856	-	4686340	.	.	hypothetical protein	MTTERPLKVLTEGLAVRLHDFNHAARQLQGLGVRLLQILPNENRLQVSPEDARWLLSNRRLDGFTRSRSAGSTRYTAQFEGVTLAWIEPISYRDFIRNTLH*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0097	cloud	direct	high	305	0.997	GCA_000297075.2_04000
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3982954	3983283	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	80086	80415	GCA_000297075_2_1_3857	GCA_000297075_2_1_3857	-	4686340	.	3MZ1_B	Putative transcriptional regulator	MTTWLDLLSAEVKASSMQKAATRLGISRTAVSLCLSGKYGASTDRVEAKVWDVLGQVDCLALGEPISPTACRDYRERKPPLHNSVAMRHWRACQHCPNNPNCMEQRHDH*	hhsuite_tools	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0098	cloud	direct	high	329	0.997	GCA_000297075.2_04001
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3983280	3983891	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	80412	81023	GCA_000297075_2_1_3858	GCA_000297075_2_1_3858	-	4686340	.	PFAM:PF05158.11	transcriptional-regulator	MMATGRKPVHLEQRGGKSNRQRVWEAIRQQRSGLTCYDLARRARVTEATVRTYLQALINGGYLEAEPTDTPPSIGQTRPLRLIRDSGSEAPALKRDGTSCTQGLGTEAMWRALRILGETSAEELARYASAAVPTTTATAKSYLRFLALAGYVQVARRVGKPSRYRMVQARYSGPRPPMIQRTKQVYDPNLGKVVWAEAPEDHL*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0099	cloud	direct	high	611	0.998	GCA_000297075.2_04002
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3983888	3984628	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	81020	81760	GCA_000297075_2_1_3859	GCA_000297075_2_1_3859	-	4686340	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MSNLNLPLSNGMAQIANLGLCDIALERALSRTSSLPGLVCFYGPSGYGKSMSAAWVANARRAYYVQAKSVWSKKHTLKSILGEMGIKALGTIPEMADQVAEELAASGRPLIIDEMDHLVASGTVELVRDIYESSQAAILLIGEEGLPTKLKKFERFHGRVLSWVPAQPVTLADAHSLVPVYSPQVGIAEDLLAHVVTIANGSVRRVAVNLEMIRDTALTMGLDQMDRAVWGSRELYTGEAPKRRVA*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0100	cloud	direct	high	740	0.999	GCA_000297075.2_04003
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3984651	3986891	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	81783	84023	GCA_000297075_2_1_3860	GCA_000297075_2_1_3860	-	4686340	.	PDB:1BCO_A	Mu-Transposase	MRNWYTATELAGLPGVPGTDRNVRAMADREGWEGQRRLGSKAIEYHIAVLPETTRAALLKQAVDTVTVEQPASLPAVRTERVALRPLSASGALTHRQVLTRDARLLIVNMLKRMQREGLSQRRACTQLLGWAANGELQGNVLIALALGNNKSGVEWNISTNAEGLTTVEAMPGQDVQAAACAVSSRTLERWLEMERNGGADALAPGKREKDMSIKPWVPYLLAEMQRPQKPCLTDAWRAMCKALPEGITAPSYDAVYRWYSQKYSSLDKQRGRNQGSALNPHKYSRTRSSSGMLPMQEIHSDGWGTHFTAPHPVSGKYVKLECWHTHDVATRYVFRPSVGLSESMLVILGSLFNAVAEGGPPAVWQTDNTGSVKNDRVQFDPVTSIQARAGIHIVHNLPGNSQANGICENFNKYLDRRARELATYMGKGMDSLAQKRVLRVTQKLVKAEGLAERRRLKAEAEKLGSGHLVQSFEEAQALLEQWCDDFNNTPHSALPKISDPVTGKRRHQTPAEAWAEHVANGWQPLAVEGEQLRDLFRPHETKVVQRAKVRLYNQFYHHPELEHWNGEEVQVAYDVHDGERVWVKTREGRLICEAKLDSVRGYRAQSVYEMAMEKRADAAIARHEAHIAEIERQRPVHVISHDAPLSIPGLGDITPERLNARFAEGLTLEGEAQRVPAPEPQQAPIPEPAKADVFTLPESPAQRYRQWRELEARVLAGESLNSTQEQRWFELYPQSKEFAAQQRQA*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0101	cloud	direct	high	2240	1.0	GCA_000297075.2_04004
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3986944	3987411	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	84076	84543	GCA_000297075_2_1_3861	GCA_000297075_2_1_3861	+	4686340	.	.	hypothetical protein	MISEEEFREMQEEMDEMRDAIDRLAAMNEALQEALFAALQSTPVRQELFASLIDRTLDQWLLQRRQLDSDDSLFLRRVRDDVLAKLPEGSLGFPPAKPRPALRAVPVLRPNGAAPKPGAVPTGAGHAPRPGGTPPDGQPLAPHGSGDESHSGKDE*	.	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0102	.	unmatched_CDS	none	0	0	.
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3987424	3987867	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	84556	84999	GCA_000297075_2_1_3862	GCA_000297075_2_1_3862	-	4686340	.	PFAM:PF06892.10	transcriptional-regulator	MNMRHGKDDRTYDLFEIPQPVLAVPGQGNYSVQVSELVGEMLKASDLDRYEVAARMSRLSGDDVSKAMLDAWSSQARTDHNLPFYRAALLEEVCASHLLTNWQVALRGGRVAYGRDALLAELGRLERTRDEAARQARELKRAMGERT*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0103	cloud	direct	high	443	0.998	GCA_000297075.2_04005
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3987864	3988313	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	84996	85445	GCA_000297075_2_1_3863	GCA_000297075_2_1_3863	-	4686340	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MHFYPIAYALFSAYVYAVRHVKPHYVTTPPGGLWIYDMNTAEIPSDPGLRWEWIKFQLRAKGTSLAKLARELHVSGQAVKNVKRTAYPRMERAIAKALGLDVEKLWPERWDANGNPNRMRPKRPEAMPASTQKHNAAYDLGHRKTGAGE*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0104	cloud	direct	moderate	339	0.753	GCA_000297075.2_04006
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3988370	3989065	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	85502	86197	GCA_000297075_2_1_3864	GCA_000297075_2_1_3864	+	4686340	.	PDB:2FJR_A	Repressor-protein-CI	MTYVESDESDAAKAERPIPLGGVGCFGDRLKEVMGSTAARAFARNCGLSEGAIRSYLSGETFPTLDRLAQIAHASKVDAMWLAFGGTAKVEEDAYAYIPLYDARCSAGNGAWNERSRVLVNLSFTRYSLRKKGLTPDNLVCLRVDGDSMMGLLEDGDTVMIDQSRNMLEGEGVYVVLLDDHLYAKRLQRQFDGSVLIISHNKEYKEMTVPKDRLAELQIIGRVVWAGGWMI*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0105	cloud	direct	high	696	1.0	GCA_000297075.2_04007
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3989240	3990184	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	86372	87316	GCA_000297075_2_1_3865	GCA_000297075_2_1_3865	-	4686340	.	PFAM:PF13808.5	DDE_Tnp_1-associated-transposase	MSHHIPISDVLVAINDPRQQGKIRHDLVETLVVAICGVLAGADTFIEIELWAEQRLDWFRRILKLPHGIPSHDTFGRLFSLIDPEEFEQAFRCWVAAILPALSPQVVALDGKTSRRSGKKNTAPLHLVSAFAADSGLILGQRATSQKSNEKTAIPELLATLALEGCTVTIDAMGTQPDIAQAILDRGAHYLLAIKGNQPKLAEAIDDFADTFLDGDPARVPHAHFEHVEKDHGRLEVRRCHVFDQLQCLPQPERWSGLRTFVMLESERTVGNQTSLERRYYISSLAPDAERIAHAIRVLALVAFRSSKNEAVRK*	common_virus_hmm	common_virus	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0106	persistent	direct	high	944	0.999	GCA_000297075.2_04008
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3990336	3990548	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	87468	87680	GCA_000297075_2_1_3866	GCA_000297075_2_1_3866	-	4686340	.	PFAM:PF00717.22	UmuD-like-protein	MTGAGIFDGYILVVDKAKRPQPGDVVLAIVGAEFLVKRLQFDCEGRAMLMARSWRCGVCACGYCKRCRLA*	phrogs_hmm	hypothetical_protein	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0107	persistent	direct	high	212	0.995	GCA_000297075.2_04009
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	CDS	3991247	3992467	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	88379	89599	GCA_000297075_2_1_3867	GCA_000297075_2_1_3867	+	4686340	.	COG1373	Predicted ATPase, AAA+ superfamily [General function prediction only]. 	MYARIIRQNLLAALDDSPVVLVNGARQTGKSTLIQNLGREATYYTFDDPAVLAAAQVDPFGFINALKGAVCLDEVQRAPGVFLAIKAAVDRDRTPGRFLLTGSANVLLLPQIADSLAGRMEVLNLWPLAQSEIERQPLSMIDRLFSGQMPDKCHFERQDFIARLSRGGYPEALSRSGERRREAWFESYLHTILQRDVRDLAQIEGLTEMPRLMQLLGARSGGLLNAAELSRSTGIPQTTLKRYLTLLETLFLVRQVPAWSSNLGKRLQKSPKLFVTDYGLMAHLQGLSEAGMAAGLGLPGDLVEDFVHAELVKHQSWSDLRTRLMHYRTSTGVEVDFVLENRRGDLVGIEVKAAATISGKDFNGLRHLREITPQQFKRGVVFYSGDQVVPFDEQLVAVPLALFWSV*	mmseqs_cdd	nonviral_gene	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_CDS_0108	persistent	direct	high	1220	0.999	GCA_000297075.2_04010
GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote	cenote	tRNA	3913728	3913804	GCA_000297075.2	HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075.2_HG916826.1	GCA_000297075.2|HG916826.1	GCA_000297075_2_1	GCA_000297075_2_1@C242	10860	10936	tRNA-Met	tRNA-Met	+	4686340	.	tRNAscan-SE score: 82.1	Met	NA	tRNAscan-SE	.	C242	89599	3902869	3992468	GCA_000297075.2|HG916826.1@region_3902870_3992468@tool_cenote_tRNA_0001	.	.	.	.	.	.