core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	32421	33563	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	1	1143	GCA_000344275_1_7_37	GCA_000344275_1_7_37	-	123291	.	PDB:1Z19_B	Integrase	MWMEELPNGKYKFFERYKDPYTEKLKKVSVTMEKKTPQARNQAAILLQEKINQKLGEKQHFVSDITFEKLYEEFEENWKHGVKNSTVYASKNVKKEILKQIEGDYLVRNIDRRLLQKVIDQLLQDGRSHNYVSKIKFKLNQIMKFAVRMNYIDTNEMLFVEMPRKVITTEDLRKKNTKYLDQKEFKLFIQNLKEEALCDYRITKYIRIAKVLFLTGMRYGELAALNYKEDIDFSKKTIHIKHTYDFRQKERTTPKTIKSDRVITAPQKVLDIIKEQIIENATNGFDTDFIFINTLGEPITNARVIGALKRHGQKIGIDKNITTHMFRHSHISLLAELGIPLTAIMDRVGHSDSKTTLEIYSHVTQKMVSDISSKLDKIKF*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_902490295.1_00186
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	33685	34356	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	1265	1936	GCA_000344275_1_7_38	GCA_000344275_1_7_38	-	123291	.	.	hypothetical protein	MKFCPECGNPVEGYKFCSNCGYSIANQESTEQAQPVDKPASPSPAPRSRKTDKVGPLEIDRYNRTYRIHGAQKAKGSSGLVGGAIKGSVKATLAVSTMGLSLIPSLVKKDKNDTDWYSFEDLVSYELIVNNQTVVSGGVGQALVAGAMFGAIGAVAGGIVSKRKSTTKILNMTVRVTSNDFTKPVIFIDLIKKPVKNTSKEYKEAVENAQRIMGALDVIVHNS*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_001814215.1_00574
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	34491	35249	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	2071	2829	GCA_000344275_1_7_39	GCA_000344275_1_7_39	-	123291	.	PDB:3DTE_A	IrrE-protein	MAREIISRRQYIQHWDYAVPVIEAASRQNNISLEQVTFQHIIRYFEQTYNLHFIFFEKDPFPMLPSAGLLSSEYIKYRGLVNNPDVTYLDDIICKHNDGFTIYSKEKEKYLVYINQTHIKRRIIFTILHELAHIAAHFSTGRSDEVALACANNYQSNPLEIEANTMASLFYINNERMVWHLKNKHSYEQIKQANTISDNALFNRLVDFVHYRILSYDEHLLDDQQQRRVAIELVTKYKQGNNILQQYYDIDV*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_000344275.1_01329
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	35252	35635	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	2832	3215	GCA_000344275_1_7_40	GCA_000344275_1_7_40	-	123291	.	PDB:1PRA_A	Repressor-protein	MFETFEKIKELAKKRGKALGQVEEDLGYGRNTLYKIKNSTPNAERIAEIANYFNVSTDYLLGRTDNPTIAKDDKANEYLGPAETELVAAFRNQTQNMTEEEKVRFNKAIESLMVTAKTLMDDDSKWR*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0004	shell	indirect	.	.	.	GCA_000010005.1_01317
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	35933	36124	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	3513	3704	GCA_000344275_1_7_41	GCA_000344275_1_7_41	+	123291	.	PFAM:PF10078.8	DNA-binding-protein	MPDIANGRERVNAFLKEKGIKKATLAVAYGFKRQEVTNILSGTTKGPRANSFILQVIEDYGIE*	phrogs_hmm	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_025909465.1_01171
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	36199	36471	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	3779	4051	GCA_000344275_1_7_42	GCA_000344275_1_7_42	+	123291	.	.	hypothetical protein	MEAVEIVRIKDVIIEKVSANDEELEHIFGCSKRQAGDMRREMKKLPSQQKHLRNDGQLVTIKGFDAYLQYRGTQAWEKEMVKSKKMRSVG*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0006	cloud	indirect	.	.	.	GCA_001553685.1_00083
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	36468	36641	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	4048	4221	GCA_000344275_1_7_43	GCA_000344275_1_7_43	+	123291	.	.	hypothetical protein	MKLLDKITKWFFNTTKIEVNTDWRLVALDLNRELIAAQEEKQILYQRIADLEKLLEV*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0007	cloud	indirect	.	.	.	GCA_018499575.1_01164
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	36646	36903	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	4226	4483	GCA_000344275_1_7_44	GCA_000344275_1_7_44	+	123291	.	.	hypothetical protein	MEIKYIYNQTPLGWVWQLVIDGYEFFYPCGDFKALKKFVKSELEVLLDKKESDSNHGLAFHACGYNGQAQQEYISYWEKQGLSVF*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0008	cloud	indirect	.	.	.	GCA_002860865.1_01337
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	36914	37192	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	4494	4772	GCA_000344275_1_7_45	GCA_000344275_1_7_45	+	123291	.	.	hypothetical protein	MTEPTLMSQLLGFATTFICFFVALMVIENNEQKRKRQVEEQEILDKAIIEVYQQGWNQFNNIARMNLRNSDKQFTYDVQPPVGLAKCVEEGV*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0009	cloud	indirect	.	.	.	GCA_000223255.2_00429
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	37194	37424	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	4774	5004	GCA_000344275_1_7_46	GCA_000344275_1_7_46	+	123291	.	.	hypothetical protein	MVRNKLTDLTNTLFAQLETLDDRDLTADELKTELQRSKQMVAISGQILQAGQLALDAEKFKDKVGEDNAPIALLEG*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_025398675.1_00522
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	37396	38160	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	4976	5740	GCA_000344275_1_7_47	GCA_000344275_1_7_47	+	123291	.	PFAM:PF05551.10	homing-endonuclease	MPQSLCWKDEYTKYMHEICPGRLTPEVTRLLNEKFGTNYNKSQIGGVRKRLGLLVGEAYQGKLLTKEQHDYLVSIQKNKISRDVANEMNRKFGLSLTEKQIKSYRRNNNLHSGLTGRFEKGQTPHNKGKKYPNMPKNSGQFKKGNRPPNYVPVGTINYTTDGYPKEKIGEPNQWVLKHRKVWEDHHGPIPKGYSIVFLDGDKTNYDISNLACLSKNEIARMNQNHLFTSNADLTKSGIGLTKLINKIREVEKNG*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_001064935.1_00002
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	38153	38635	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	5733	6215	GCA_000344275_1_7_48	GCA_000344275_1_7_48	+	123291	.	PFAM:PF05565.10	resistance-protein	MASLYELTGQFLTIYQMDIDDETKADTLEAIDWQEQFEQKAEGYAHVIKNLEADVDMYKAEEESFKAKKQAAQKKLDYVKDNIMAAMNVTGQTEVKSGALIIKIAKNPESVKVNEDDLPKKYFTKKVTLAPDKKTLKELLKSGKKVKGAELIRTEKLVIK*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0012	persistent	indirect	.	.	.	GCA_000167275.1_05696
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	38635	38994	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	6215	6574	GCA_000344275_1_7_49	GCA_000344275_1_7_49	+	123291	.	.	hypothetical protein	MELMNKTRVTDSLAVVIGPESIEVLVTEGFLFDVAIRFVKVDETNLDQGNEKPVFTPEYKLVTVAKYKEKPIFESEEDIRRFEKQAKEIKALFAFAKVNKQNWFNTALYPGVLTEKVGV*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0013	cloud	indirect	.	.	.	GCA_001579115.1_00748
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	38994	39458	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	6574	7038	GCA_000344275_1_7_50	GCA_000344275_1_7_50	+	123291	.	1NU0_A	Structural genomics, hypothetical protein, yqgF	MKILAIDPSSNKIETSTTGIVLLDNAKLVDYWVVPYGAQNFKAWFKEIGRSLEFDIVVVEKFEVRDNDYSRDNSVVETIAAIELCYPDLVLQRNAGYQTDIPNDLLKALGLWNFDKSHHNDVRAAARLGLFYAQRNDIEEVIVDIGNRITQMAS*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_025150805.1_00333
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	39427	40602	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	7007	8182	GCA_000344275_1_7_51	GCA_000344275_1_7_51	+	123291	.	PDB:1Z3I_X	Recombination-ATPase-helicase	MAIELRKWQAEAVKRSDRNCPGIFLEAYGGRGKTICAFEIAKHKSAKKVLVINNRLAILNGWNSTYQNLGYDTDFELETMTDRRLQNRLASGESIECDVFIIDEWQNMSSDANVKAYRKVKRGYTVGLSATPIRKKGQNFYPLEKTFFGMADPNQRENWQLAHGKMKYSKFSYSKQEWDDFRDYENYVSNLPNFFRWEEVEAIEEAEENNGFEVVFEPIWCLTANPEELEQFRKLNIVGKDGKYAMAKQTFGRKTFERYLIQTGFEVDFPKLKAVNADTPMLLQLDLLLASRTEMLIVSKSKQIVEVIRERHPEIGIWTGDKKDSLEQTNVVATSQVLGVGVDGLQHKFKTIVVLDPVNPSDGDYDDYRQLLWRVTGSRQQHDVRVIEFYF*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_901875545.1_01072
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	40614	40928	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	8194	8508	GCA_000344275_1_7_52	GCA_000344275_1_7_52	+	123291	.	.	hypothetical protein	MKLSSDYIVMRDKQSGHFLNELKNKRSSLATQAGFVDDIRGALTMPYDCYLEQKTALKSLAKVHGMEIIRVKATFELTYPNGSDVSKIERENTKPGLLDLLRNL*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0016	cloud	indirect	.	.	.	GCA_905209855.1_01612
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	40941	41651	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	8521	9231	GCA_000344275_1_7_53	GCA_000344275_1_7_53	+	123291	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MVTKQQSPIFVTLQSIQQSLVAPKGQYNSFGKYSYRSAEDILEALKPILQEHDAVLILQDGIVQIGDRYYVEATATLYAVGETIGTTAYAREDDSKKGMDGSQVTGAASSYARKYALNGLFMIDDNKDPDTDEYHNQNSQAGRTSQKPAQKTNSQQKQPANAPAKSNGAKTITGAQAKTIRTELKNMAEATGSPAATIGKWFIDKMGVDKPESIPADRLKEAQKIIADAKKARGIE*	mmseqs_cdd	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_019929965.1_00649
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	41651	41941	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	9231	9521	GCA_000344275_1_7_54	GCA_000344275_1_7_54	+	123291	.	.	hypothetical protein	MGYTELGRKRPIELQIDYYDKILVYQHQGEIWGVCYKHGEIDCVYNYTKNDFFWLEISDMSLKEIVTKIIKPLKRNNPGLYSFHESTFSRILEVIK*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0018	cloud	indirect	.	.	.	GCA_000344275.1_01344
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	41941	42333	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	9521	9913	GCA_000344275_1_7_55	GCA_000344275_1_7_55	+	123291	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNAVLVGRMTRDAELRYTPQNVAVATFTLAVNRTFKSQNGEREADFINCVMWRQQAENLANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQMLESRNQQSSNDTFGNDNPMDIQDDDLPF*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0019	cloud	indirect	.	.	.	GCA_000814045.1_01398
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	42345	43172	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	9925	10752	GCA_000344275_1_7_56	GCA_000344275_1_7_56	+	123291	.	PFAM:PF09250.10	Bifunctional-DNA-primase-polymerase	MGMKEHALAYQKKGFSVIPISPSNKQPMIKFADKPAMTAQEIEDFWSQYPDSNIAVRTDKFFVIDVDLHGKANGYESLANWEHLNLITPTLQAKTASGGKHIFYFKHPDVSMTQMIGFLPGVDIKAHPNNYVLVAPSKTSKGVYAWDKKKSKEGGTMVTASRSLVMAIKKEYNKKNSGSDLDNIYYQISKGAGKRNRTTELFEMVVLGFGDEGSRNDTLAKFVGGLLSRSVEPNCILQLAETANNNSVEPLSHKELSRTVESMIKKHMRGGGHNR*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0020	cloud	indirect	.	.	.	GCA_020590155.1_00552
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	43156	44556	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	10736	12136	GCA_000344275_1_7_57	GCA_000344275_1_7_57	+	123291	.	PFAM:PF04735.11	DNA-helicase	MAIIGDVTNISIKQFSRRKKKILDEEGEQIEIESIVADSPRNVLLAMKSDNKLNDFLRHNEFTGEHEIVEDVKLDAIQLRKGQLPSAFESYLSVYLENHFKTVFKAGALRDGIEAFFAEKTYNPVKEYMENAYESWDHKERLAQVFQTWLGAEDSIFVQKIAVMFFVGAVSKVFNPWVKFDYTLDLVGGQGAGKTTFLQKIAVDWYTDSAKDFMDKDNYEIMLKSLIVNDDEMVASRKTTFDELKAFVTKTELSFRRSYGRRAEKFPKNFVIARTSNKIEYLGDKTGERRFLPVLVDAGQQFVKPFDMTDHDVLQLWGEAVAIYKKGFILTFDDEFENELAVYKERFTYKDEAESQVYDYLEMLVPEEWEDFSVTQQHQYTWCYFNDGSYRNESGLLYEGVKLQSSVSAKQILKNVFDIDSARGEKIARKIKLIMDNNQDWEYKIKKVKGKTIRAYFRKNIQTEVM*	rep_hall_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0021	cloud	indirect	.	.	.	GCA_959020975.1_00398
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	44936	45088	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	12516	12668	GCA_000344275_1_7_58	GCA_000344275_1_7_58	+	123291	.	.	hypothetical protein	MSYTVTLYFDNMVDETHFFKKVGDAAKCKAQLENKYRGERLYKVELEEVE*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0022	cloud	indirect	.	.	.	GCA_002073835.2_01171
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	45088	45348	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	12668	12928	GCA_000344275_1_7_59	GCA_000344275_1_7_59	+	123291	.	.	hypothetical protein	MIINNYKYDYSSGRICYTIDVDGYEKAMEHTKTEYGSVQRNDIDDFLSTVEEYDFQEAEMIEAFVDFQNDLLLYGIGFELRNEVTR*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0023	cloud	indirect	.	.	.	GCA_902167825.1_01757
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	45345	45497	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	12925	13077	GCA_000344275_1_7_60	GCA_000344275_1_7_60	+	123291	.	.	hypothetical protein	MKRTKRHPSRYFIPELIEDEDIIFNKDSEYHKQKKKEKKNPIFKRNKPKR*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0024	cloud	indirect	.	.	.	GCA_019733955.1_00400
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	45510	45749	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	13090	13329	GCA_000344275_1_7_61	GCA_000344275_1_7_61	+	123291	.	PF07116.11	Protein of unknown function (DUF1372)	MKNTLIRFLLAWSLIATCLLFMQQKPLLVYHADSKYQITGKVTEKRKIGNLFTITVNGNVFVVSEQKYNHIEIGDNIEL*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0025	cloud	indirect	.	.	.	GCA_022069325.1_01061
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	45746	46231	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	13326	13811	GCA_000344275_1_7_62	GCA_000344275_1_7_62	+	123291	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLENVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLALLIKEDVHKIFNEVFSDEYYVIECLVFLNRAISNIQLSNGFTNKDIYIVDLSRSIYWLKSISNALGYNFEECFELAYQEIKDRKGKWIDGVFVKEEDL*	phrogs_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0026	cloud	indirect	.	.	.	GCA_002093575.1_01870
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	46233	46511	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	13813	14091	GCA_000344275_1_7_63	GCA_000344275_1_7_63	+	123291	.	.	hypothetical protein	MKRLGVVLGAVFVIVVSPFVVQYGWNEIITTIVPVSKITVWQALGMDALLSFIWPVLSSKKESEEDYSYAVKSSISKIITCALLIWLASLFI*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0027	cloud	indirect	.	.	.	GCA_000185265.1_00697
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	46602	46847	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	14182	14427	GCA_000344275_1_7_64	GCA_000344275_1_7_64	+	123291	.	.	hypothetical protein	MKPKKYPYSGKLKLIRQTLPRFVLLGNAAFNSNLVKYIDTIKQVAPNQTIVYFKIPKFLSHEEKYVRVPLKIGEVVKILNR*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0028	cloud	indirect	.	.	.	GCA_023611505.1_00053
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	46925	47374	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	14505	14954	GCA_000344275_1_7_65	GCA_000344275_1_7_65	+	123291	.	pfam07374	Protein of unknown function (DUF1492). This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.	MNKAKELLDELQNLDEEIQNRIDELANLEASLLSSPKMNMDKIQGGQKVRLDERYIDIFSMQDSLKEYMKQATAEAIQRRIELSKLIDKIPKPASRTILRMVYIQKASVYDMIEFLQCSKTTFYKKKKDAIRELGVVVDKSELMRTNVN*	mmseqs_cdd	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0029	cloud	indirect	.	.	.	GCA_023109195.1_01865
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	47846	48343	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	15426	15923	GCA_000344275_1_7_66	GCA_000344275_1_7_66	+	123291	.	PFAM:PF03592.15	Terminase-small-subunit	MNERQRRFADEYIISGNATDAAIKAGYSEKTARSQGQRLLTKVDISEYIKKRMDEIQDEKILTQKQILVMLSEIASGQAKETIVVTTKVAELMTDPVTGKSVKVYNEIPQLVEYPTKNSDRNKALELLGKRHQMWTDKVDINAIVTETKKFDDIVSQLGGDGLDE*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0030	shell	indirect	.	.	.	GCA_001051895.1_00638
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	48327	49667	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	15907	17247	GCA_000344275_1_7_67	GCA_000344275_1_7_67	+	123291	.	PDB:5OEA_B	Large-Terminase	MDLTNSFPLSQKYIDFCNSFNNVDADFLEGTTAAGKTTVGVGVKFMRAVSRSTKKFHIIAAKTVGVAEKNIINQDNGILDIHKTAVYCGNGDKDSKIPHIKFEGKIIYVLGYDNKEKWKLVLGGQYGCVYIDEVNTADIEFVRELSTRNDYLMATLNPDNPDLPVYKEFINKARPYKKYAGDVPEEIMRDLSEPANPKWRYWFFTFNDNLSLTPEAIQKKKDAAPVGTKLYKNKILGLRGRATGIVFVNFDSKKHVLSKSFVKNTVTFQRFTAGLDTAYSASSPDTIAMIFQGISDDGKLYTLDEEVYNNAELDVPIAPSDTVVKFINFLERNRSEWGLARDVFVDSADQATITELNKYKRQYGCLYIFNNAYKKTKIIDRINFQIGWLAQGCYYVLSHCMNHIKELNTYSWKEGKDEPEDANDHTINANQYAWLPYRKIIGRKEN*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0031	cloud	indirect	.	.	.	GCA_023611505.1_00056
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	49669	51237	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	17249	18817	GCA_000344275_1_7_68	GCA_000344275_1_7_68	+	123291	.	PFAM:PF05133.13	Portal-protein	MGIMDMIRKSMRSFLKLEQAQPNVITITEAMTFEDNAAKNQIWYRGDSYELDQLYKQLSHSNINFWGATSTPGQEIRKIHTGIPGLIVDRLVDITLHDMNDLDFAEEMQGTLWEEIAEDSNFHDQLQEAIKDSLVMGDGAFRISFDPELTALPIVEWVGGDRIEIIYNRGRLKEVIFRTHFTERRRNYLLEEIYGYGSLTYKLYRGETELDMSATEYTANLVDVEFDKSVILCLPFKIYTSPKVKGRGQSIYDRKTDAFDSLDESWSQWMDALRSGRSREYIPENLLPRDPYTGEISKGNPFDHRFIKVETAMGEDAKNTITLQQANIPHESYLSTYVTALDLALQGIISPSTLGIDVKKLDNAEAQREKEKATLYTRNAIVTALQDYLPKLISMVLNADSVLKKNPLQKVKVDVPFGEYANPSFESQVETVSKAKTGGIMSIEASVEELYGDSKDQDWKDHEVARIKAEQGVTEVDVPSLNEAANDFEIEKEAEDAEDSDDRTEDLSHESEGSAGTSTDSE*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0032	cloud	indirect	.	.	.	GCA_023611505.1_00057
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	51194	51382	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	18774	18962	GCA_000344275_1_7_69	GCA_000344275_1_7_69	+	123291	.	.	hypothetical protein	MSQKEAQGLLQIASDNVEFGIYAVEKNNKLDMLNLKMPSKTALKRQLRSFKAQGFKVYCNGL*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0033	cloud	indirect	.	.	.	GCA_023611505.1_00058
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	51372	53141	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	18952	20721	GCA_000344275_1_7_70	GCA_000344275_1_7_70	+	123291	.	PFAM:PF06152.10	Minor-capsid-protein	MAYDVSKAFERIENDLLDSMIRNLGRHKAEETAEGFEWEQWQVAQLKELERFKRSNAKKYSKEFANINSKISTAIQEAYKQGMDDEEMSILEAIKNGFEFNSGTDNLGASFFAINERKLNALLNSIEHDMKTAEHAVLRYTDDQYRRTIFDAQVAANTGAKTYEQSVDMATKDFLSRGITCIQYSNGAMVNIVSYADMAIRTATKRAYLMGEGVKRQEWGIHTVILNKRSNACPLCMPFEGKVLIDDVWSGGSADDGPYPLLSSAMAAGLYHPNCKDKHTTYFPGVSSEPEKIFTNQELDDIKERQLLDNKVQHAKRQEKRFSRLSQFSLDKDNVQKYTLRAEEWSKFKSNAEENLKYFEAEKGYKLYQEFSLESDSDYKKFINRQRLPRDTSGVASKKISAETRHMYIEATRKKFKDGTELGQALFARLADQSAIATIAETGVVRYESGKLFLNMYKDVDDPRGPGTGYFHEFGHQIDEKLGWEFTKDKKILQLLRKDFINLSDDTIFEAIHINDKASSASDILGALSEGRIQGKYSHSLVYWEKKGNIESEFFAHVFEAQFDSERREILEKTFPESYNYVINKLKER*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0034	cloud	indirect	.	.	.	GCA_023611505.1_00059
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	53144	53401	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	20724	20981	GCA_000344275_1_7_71	GCA_000344275_1_7_71	+	123291	.	.	hypothetical protein	MRIIESYQRVAEKADTFSDIFGYRLVAPIFPVAAIYGPQEESDIFEAKLDKCIKDQYDYFADEYGYDSEEKRRRLQREKYVFYDC*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0035	cloud	indirect	.	.	.	GCA_026782325.1_01863
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	53455	53706	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	21035	21286	GCA_000344275_1_7_72	GCA_000344275_1_7_72	+	123291	.	PFAM:PF14083.5	nucleotide-pyrophosphohydrolase	MKYRKKPVVIEAVQWTGENVKEIATFMGIESVPYDLNTRKLSIVTLEGIMEASKDDYIIKGVQGEFYPCKPDIFAETYEKTEE*	phrogs_hmm	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0036	cloud	indirect	.	.	.	GCA_025309775.1_01578
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	53708	53959	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	21288	21539	GCA_000344275_1_7_73	GCA_000344275_1_7_73	+	123291	.	pfam19791	Family of unknown function (DUF6275). This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria and their phage. Proteins in this family are approximately 90 amino acids in length.	MLEKAKQLASQEFSRLSDREIKAEDCFVVWFSKTLQNWKALVSTNAITSSEPCGDYAEITHNGDKKETYVDVYAKVSNRAIKD*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0037	cloud	indirect	.	.	.	GCA_030770265.1_00536
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	54149	54739	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	21729	22319	GCA_000344275_1_7_74	GCA_000344275_1_7_74	+	123291	.	PDB:6B0X_d	Major-Capsid-Protein	MFKRKLFFHNADTGTGSGSAGGQDTSSQTQSASTPEIDYDKIASIVEGKQKVAEDTVLKNYFKQQGLSGEEMAQAITAFKSQKADATPDVTSLQQQLTQAQASALQANLERNLQLAAIEEGLPVGVLPYVMKLADISTLTLESKPEDFKAIVAKVLEDVPALKPNKEESTGFQQIGSTGKAQQTNQTDAIAAAFGL*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0038	cloud	indirect	.	.	.	GCA_030011735.1_01611
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	54759	55658	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	22339	23238	GCA_000344275_1_7_75	GCA_000344275_1_7_75	+	123291	.	PDB:2XD8_E	Major-Capsid-protein	MTVYNYAEQFEQALHQKYAKELASVDLFNSNPQVKFINAQTIKLPNITVSGYKDHNRQTIGFNSGTISNDWEPKKLEHDRDIEFAIDPMDVDETNLVVSIANVQNTLETEQGIPEKDCYVFSKLYTEAGKYTANGATIDTTTLTAENILQKFDDAMEKMDEAGVPSEGRILYVTPAVNKLFKQAKDIQRVLGVNGSNGDVKRSIYSLDDVKIKQVQSARMKSQYNFTNGCVATDEAKQMNFILIHPSCEVAREKYSYIKVFTPGHDSRTADNYLLQSRFYMDAFLIKNKAAGIFINATA*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0039	cloud	indirect	.	.	.	GCA_002096815.1_01939
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	55677	55892	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	23257	23472	GCA_000344275_1_7_76	GCA_000344275_1_7_76	+	123291	.	.	hypothetical protein	MALKAIKGARVYDIDESAINDFVGRGFEVYEDGELKYGESVDKVSKEEYEKVLADLKNAKDEIKKLKGAKE*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0040	cloud	indirect	.	.	.	GCA_026782325.1_01859
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	55898	56272	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	23478	23852	GCA_000344275_1_7_77	GCA_000344275_1_7_77	+	123291	.	CDD:cd08053	Head-Tail-Connector-Protein	MYASPDYYKKTFVGVISADSEELASKLKSASDKIDILTFNRIRGIGFDNLTPFQQEVIRKACCQIVDFEEVNADLIATTVSNYSINGVSMQFGSNWNIATEQGIVIYRKTYELLKQTGLTRRVI*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0041	cloud	indirect	.	.	.	GCA_023611505.1_00066
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	56272	56610	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	23852	24190	GCA_000344275_1_7_78	GCA_000344275_1_7_78	+	123291	.	.	hypothetical protein	MKFPQLVLPQFCQTQITVIVNQEGVSEDGEPLEAFRANLKCNYQDSVKTVLTEQKKLVQITGSAYFVGDIAPYLPTLSGGTAIVFGIVRRIVDSRKARNPDGTVNYTYIGLE*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0042	cloud	indirect	.	.	.	GCA_015256025.1_00856
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	56615	56995	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	24195	24575	GCA_000344275_1_7_79	GCA_000344275_1_7_79	+	123291	.	PFAM:PF11114.7	Minor-capsid-protein	MFVNSTVKLDFGTIRKLERAQIIALEQTAEYLHTEVVQAQVVPFDKGVLQGEAMAPDYSHSSQGVVSLVHSTPYARRLYFHPEYQFQTKENPHAKGKWFEDWVDGGKKSHKIKQAYGRLYKQITGV*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0043	cloud	indirect	.	.	.	GCA_026782325.1_01856
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	56998	57408	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	24578	24988	GCA_000344275_1_7_80	GCA_000344275_1_7_80	+	123291	.	PFAM:PF11367.7	head-tail-connector-protein	MITLAEVRDWIKTFNAANNYYIGKIDNKQENSIGIYQRKTIDGPRVAIGGRALASYEVKSISILIHWNKNANETEKRAQYIYNRLFEAESVVIGGTPIKMIALLQNEPVDVGTDDNNVYERVIELDLYYEREREGN*	phrogs_hmm	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0044	cloud	indirect	.	.	.	GCA_023611505.1_00069
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	57408	57851	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	24988	25431	GCA_000344275_1_7_81	GCA_000344275_1_7_81	+	123291	.	PFAM:PF16461.4	major-tail-protein	MAQKTGVFPVYENQFQVNKGTAGVESLVDIADMESFSVSFDNGVEEWKPFDQKGWTRRLMTAKSVTISVSGKRNVGDAGNDYIAGLAFKNGRDSEADFQWTFPDGTKIKFKDAVINLKDFISGDSTGVAPLSFDVMSNGKPEVVPAG*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0045	cloud	indirect	.	.	.	GCA_026782325.1_01854
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	57894	58091	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	25474	25671	GCA_000344275_1_7_82	GCA_000344275_1_7_82	+	123291	.	PFAM:PF08198.10	Arc-like-repressor	MVEAEETNATATIAFIDIDTGIEYKAGDTVDLSGKSKERIEAMASKENRTGQILINILSEEKETE*	phrogs_hmm	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0046	cloud	indirect	.	.	.	GCA_026782325.1_01853
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	58091	58393	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	25671	25973	GCA_000344275_1_7_83	GCA_000344275_1_7_83	+	123291	.	.	hypothetical protein	MSKVIDITEKLNFEENPKLKIKDAEIEVNTDATTVLTLMQTVGDEEGTPSAKKMMEMFELIFPENSRKTLNEMRLNFADLTKVIEAAMTLVTGEEEMGEQ*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0047	cloud	indirect	.	.	.	GCA_000160635.1_02064
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	58488	58721	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	26068	26301	GCA_000344275_1_7_84	GCA_000344275_1_7_84	+	123291	.	PF06854.11	Bacteriophage Gp15 protein	MKWKEFKALLAGLSGETPLGRIVQIRSEDDPKMLEVFSEGQHRIRNEWRLRLAKEKTEQDLTQVLEELKQAFVEMAK*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0048	cloud	indirect	.	.	.	GCA_905196715.1_01305
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	58735	61911	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	26315	29491	GCA_000344275_1_7_85	GCA_000344275_1_7_85	+	123291	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAQTVGQIGLDLVVNDKQFKGQMSGLQGMATKAAKMLAGAFAIKKLVDFGAQAIKLGSDLNEVQNVVDVAFPRMSKQVDDFAKQAMYTSGLSETMAKRYIGTFGAMTKAFGFNEQKAYEMSTALTSLAGDVASFYNISQDEAYTKLKSVFTGETETLKDLGVVMTQSALDAYAMANGFGKTTQEMSEAEKVALRFAFVTDKLSLASGDFARTSDSWANQVRIMKLQFESFMASVGVGLINIFTPVIKVINFLLSKLLTVGNAFKALTELFTGKKSMKGSGIQETADAVGSLGEASDGAAGGAGNLGKAAKGAGKAADGAGKAAKKAAQEMKSLMGFDQINKLSDSSDSGDGGGDSGGSPGGSGGGGGGTPKGAEVDMGKIAEGGNQLDGLFDGLFKRLLELVKLFQDGFNASFRFDGVERLQSALKRIGELLQEIFTDPKVVASFQTMLDKIAYALGQFTGSMGTVALGIGVFIAESIANGLQRQKERIKGALVSLFTNIGNVAEVAGNIVQAFSNGFYDVITSSGAVRIGSAIVSAFLSAGSTVIELGSKIAGDFAKGIEKAIVPNVPQLVKAWTGLLDGIAPVFESLESLVDDVGDALKRVYDDKAKPFIDSLTSGFGQLLKSFLDGWNTYLNPVLSKLGEKFSEVYDAHVKPAIDNLSMLLGSFFDFFKAAWEDFVSNVDVEKFMEILSGLVEVVGTTLINAIAALSDIISGLAQALSGLIDFVTGVFTGDWDLAWNGIKNLFSGIIKSLLAALGIDIDSMIAEFTRWWESVKTIFAPVVQWFKDKFKQAWDAIVAIFTGIGSWFSQRYNELKSNLASIPDWFKDKFRSAWAGLTGIFNPIASWFAGKWSNIQSALASIPGWFSSKFREAYNNVKNAFSGIIGFFSGLWGQIRSTFTHVGTMVGSAIGGAVRSVINGVLGTVESTINSGISLLNGAISVINKLPGVNIGGFSYIGLPRLAQGGFVKANTPQIAMIGDNKHYGEIVAPENKMLEMARRAAELSNNGGGPEVLALLTQLLQAVRALDLTIDGDKITKKIVDKINEIAIKTGESPLMI*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0049	cloud	indirect	.	.	.	GCA_026782325.1_01850
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	61921	62262	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	29501	29842	GCA_000344275_1_7_86	GCA_000344275_1_7_86	+	123291	.	.	hypothetical protein	MSEISVGGVALASPVEISINNEIIWSSSTGRSASGLMTGDVIAEKCTFSIKWGIITEAERNLIKSKLVAGFFTANILGQSITGYRGTITETVMGRLSDGVTYYNGLSVSIIEQ*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0050	shell	indirect	.	.	.	GCA_015558365.1_03029
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	62271	65312	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	29851	32892	GCA_000344275_1_7_87	GCA_000344275_1_7_87	+	123291	.	PDB:3GS9_A	tail-protein	MLEVTSDYIKAIENHLRVFEANFDLNGKRYTKTKIASATYDSSIGNSHDFTIGGGYINSLEIEIKEIIEGLQEMMPATMSVAIAGKTVPLGKFFVTEVKLDRNDKKTKIKLQDEFVRLSGAYDSQLTYPAYTRDILSEIVRLTGITTDTNIQLVNDQVAKKLEKTSYREALVYLAQLSGSFVRFNRNGKLDFIKLKTTSRHITKDMYKPGGLERDEIPYRLKGIECKSADKVVYKSGLSTGNIMKLKNPWVTQEILDRVFNEYRDFNFYPYTLSWRGDMAMESGDWVTVHWDENIYFDIPMLSYKLSFDGGLSAHSSGNAAGVAQGTYKYKGSMQRQIEYLDELITKQGSMYLDTSSPTKPKNGDIWFKPNGGYVEMWERVEGSWVKKADSANVGEIVNTITTDELLAKKVSAAIGNYITLNAKNITAGDLDLARLRIMNGLQEIVSVRDGKVVMNIDKLTINSKDVATKEDLKKIELTPGPKGERGQQGVPGIQGLQGPKGDPGPQGAIGPKGDRGEKGERGLQGIQGLQGVKGDQGIPGLKGADGRTQYTHIAYADTISGSGFSQTNADKAYIGVYFDFNSTDSVNPADYRWTRWRGRDGADGLPGKPGADGRTPYVHFAYSENADGSDLTMTDNGQRYFGHYSDYEKPDSSDKTKYKWADRWAKVEVGGRNLFLNSLFKRDLHQRYSTYHVDDSVEQTQGQLALSIDANTKFRGANTLKIVSTYNGKATNQKVTFRTGGDTRLGTVDEMKNKAVRFSFWAKSTVNNTNFQARAGYRNAVEGVSLTTDWKFYDIELTKKENSNATNELILHIFTAATVWIAFPKVEVGTVSTDFSEATEDIQNDINSKADQSLTQEQLNALAEKAQLHDVELKAKATMDQFSDLEKTYNAFVKSNVESQKKSESDLIEAGRRIEFLSIEFGGLKEMKKFIDTYMTSSNEGLIIGKNDASSSIKVSHDRISMFSAGKEVMYISQGVIHIDNGIFTASVQIGRFRTEQYYLDKDVNVIRYVGG*	hallmark_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0051	cloud	indirect	.	.	.	GCA_000344275.1_01378
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	65323	67365	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	32903	34945	GCA_000344275_1_7_88	GCA_000344275_1_7_88	+	123291	.	pfam05895	Siphovirus protein of unknown function (DUF859). This family consists of several uncharacterized proteins from the Siphoviruses as well as one bacterial sequence. Some of the members of this family are described as putative minor structural proteins.	MTKFINSSGPLHLNLYVEQVSQDITNNSSKVRWRATIDRDGAYRTWTYGNISNLSVWLNGSSVHSSHPDYDTSGEEVTLASGEVTVPHNSDGTKTFSVWASFDPNNGVHGNITISTKYTLSSLPRSSAVAGLDGDRNLGSRHTIRIDRKASAFTHQVWYRVFGSDWIDLGKNHTTSVSFTPSLDLARYLPKSSSGVMDICVRTYNGTTQIGSDVYSNGWYFKIPDSVKPTFTGLSLTDMNTVARQLLSGNDFLQIISDIQVNFNNASGAYGSTITGYRAEIVNKKMVVTKNGSSFGIMNFSGLATIRAYVVDSRGKQSDTKDITINVIEYYAPSFSFSALRTRGNPNTLQVLRNARIAPIMQSGKQRNVMSLTFKVAQIGNENFTDDNGSASGNFTSVHTLTNSAANMAGNYPSNKSFVIIGKLEDKFTNVEFSTTVATESVVMSYDKNGRVGIGKVSEFGKPGSLDVLGDIYSNNKPIQQYQLTNAYGGLSRGSAQWDDIWSKQGTEFGWRNGKYADNPTGNDWGLFQNYWLDSWKGVQFFTGITSNRFFFRTYNNANKWSPTQWKEIATKDDIQSLPWQNAVLQNGWNHHPEYEKVQFSKTFDGIVYLKGTCKGGKTTRESIIFTLPENFRPSTTLFKTALNNDYGPAVVGIYPGGNVVVKGNVDATWLNFDNVSFKI*	mmseqs_cdd	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0052	cloud	indirect	.	.	.	GCA_000344275.1_01379
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	67375	67980	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	34955	35560	GCA_000344275_1_7_89	GCA_000344275_1_7_89	+	123291	.	pfam07104	Protein of unknown function (DUF1366). This family consists of several hypothetical Streptococcus thermophilus bacteriophage proteins of around 130 residues in length. One of the sequences in this family, from phage Sfi11 is known as Gp149. The function of this family is unknown.	MKLEYGTKSQEFDASGKEFATKVTLVNSDGAIVPIMLPADKISLSNTELFELALEALYQENFPNRAENEKFNKVNEQIQKSQENVAKVEQAATDNKENLDAVSAITEVLIALAISQNGGMPTYAYNKVAEFIKPLVKSTRYGNGDIVAMPYPFDTNPKWPKGTKTIFKFQMQATEGYTWKEQALAEMLQQGVLTVVMPRIE*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0053	cloud	indirect	.	.	.	GCA_015255615.1_01582
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	67992	68291	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	35572	35871	GCA_000344275_1_7_90	GCA_000344275_1_7_90	+	123291	.	PFAM:PF10960.7	involved-in-bacteriocin-production-or-immunity	MPIEEAEKIAQSQVAWAILFILLFFIIIRYLIKTSDKREKKIMDLHEQSKADSNRREERLMTHLEKTTTELTTITHAVGDIQKEMVRMNDRMEEIEKGE*	phrogs_hmm	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0054	cloud	indirect	.	.	.	GCA_019930045.1_02095
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	68295	68627	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	35875	36207	GCA_000344275_1_7_91	GCA_000344275_1_7_91	+	123291	.	PFAM:PF09682.9	Phage-holin	MQQITEIIIASATGILTVLAGIAVKSIKDFLIKKGGEKTIKIVEILAKNAVNAVEQVAQETGFKGEEKLEQARTKIRAELNKYNISMTDKDLDTFVESAVKQMNDAWKGE*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0055	cloud	indirect	.	.	.	GCA_016648855.1_00676
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	68630	69595	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	36210	37175	GCA_000344275_1_7_92	GCA_000344275_1_7_92	+	123291	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTDLPQVGEQPYRQIHAHSTGNPNSTAQNEADYHMRRPVDSGFFSHVVGNGRVMQTWYTDMGAYDVGGGWNVEGYGQVELIESHSTKEEFMRDYKLYVELLRNLADEAGIPKTLDSDSLAGIKTHQYCTYNQPRNYSDHVDPYPYLAKWGISREQFKKDIEGGLSEAGWKRNETGWWWEESDGSYPTKRWKKINNEWFYFDERGYCLINRWFNDGKDWFYLDKRGAMVTGWMFLNHRWYFFKSDGRMATGWVKYRETWYFMEEKDGYMLSKQFIKSGDGWYYLKANGELHTDPAFKTEPDGLITIIDKPKEEK*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0056	cloud	indirect	.	.	.	GCA_000963255.1_00923
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	69803	70603	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	37383	38183	GCA_000344275_1_7_93	GCA_000344275_1_7_93	+	123291	.	NF033804	antigen I/II family LPXTG-anchored adhesin. Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.	MKNDFHQIDFGNGYVSNLVTVQVPDLKPEKHALDQKDDSKIRDGQEIQIGEYIRYLLNGVTVPAKHDTLHQYDGIDMLDLKHDRYTGNWKGIIRGTEYVAEKDLVLPYDVVLKDGKVVKAGEKIAKGSAYAFQFEFDQSTNSEFIKKIVRVSWDEKEGKWSYTIDKEFLNSLGVRGTFDADFYIEVERIASGEVENTFVNIVNGQEMEAKVTTHTPEPPAPEEPHKPQEPNKPSLPSTGTASSMLGFVGTGILSMLGLVGVKRKKD*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0057	cloud	indirect	.	.	.	GCA_015553015.1_01868
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	70699	71007	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	38279	38587	GCA_000344275_1_7_94	GCA_000344275_1_7_94	+	123291	.	.	hypothetical protein	MAKIKKLPVGLNVIGTKVVVSPKFREVVNGSYDDFVPFREFEISGDHQSTVTIRVYGLANSDVPKTRGLTFVKSVSGLNMVTRLVGTKEEIQFEATELRFEK*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0058	cloud	indirect	.	.	.	GCA_015553015.1_01869
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	71034	71459	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	38614	39039	GCA_000344275_1_7_95	GCA_000344275_1_7_95	+	123291	.	PF06125.11	Bacterial protein of unknown function (DUF961)	MAFSIRKFNNAEIPVNAKELLGKLQFISFIENFKMVDGSPVDYPTHAEVFSDKMQEIIPIKLEEGISVDDIPMMSEVELVGDATIWIYEDPYTISRGNNVSEVKGHAFALRAENVKRVGAGQPKQEQKQDQKPEQKQEHKG*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0059	cloud	indirect	.	.	.	GCA_026782525.1_01444
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	71479	73221	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	39059	40801	GCA_000344275_1_7_96	GCA_000344275_1_7_96	+	123291	.	PDB:2IUS_D	DNA-TRANSLOCASE-FTSK	MSLLPAYRGVRIFPFMEKLRYYIFSFFFLLFSPILAFFVYSNFEKIKNVDIFSIVVSVVMLILIIGVSIYLTWLSQERIFYFQKRERESRLAFFLRENGYTYTKKVKTDSGTRDKVVFPVVYMKQNRYDLEIAFKMAGNKFQDKFKKIGSELETTFFMDFMEVQDDVKFKTFKLAYSAFQNRIKVTDVEYSEKGIQLMKNLYWNPIDDPHLLVCGGTGGGKTVLLRTLIRAMAKVGVTDICDPKQADFVTMAEQKAFEGRISYQVDEIVEMIERAVGIMFARYAYMRQKREENCDKDLKKFYEYGLEPYFLVCDEYNALCAMLDFQTRQRLDNAMGQFLLLGRQAGCFAVIAMQKPSREDLGSKLQANINFRISVGRLDEVGYDLAFGEVNRNKEFKYVKYLGGKRVYGRGYASVYGEVAREFYSPLLEKGFSFTDEYEKIERRENPFNPLENPDAQLSEEEKENLQAEMEAQEELQKGEVKKASSELVQELMSSKQKESGNDLVRTFAFSKEIGVSAGSMKNLVDKLDGILEFEKEDNVVYLNEIQRNIIKDLFELKQNTTQNWSEILEDFPFDEYSSS*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0060	cloud	indirect	.	.	.	GCA_000688775.2_01225
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	73480	74697	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	41060	42277	GCA_000344275_1_7_97	GCA_000344275_1_7_97	+	123291	.	PFAM:PF02486.18	Replication-initiation-factor	MEFENLNKVQKMYAFSDQEMSNYLEIDRATFYRWKEAGEIPESYDSKVNALIVFKEGVRDSGFSLEGKVDYVKVTFKTQDYIDVIAKVLCLQNKPFLEEEKGGSGYDTKYTFQNINVFISKKREDMGCMIELKGQACRQYEWYFENEQKSSWRDFFIRCFEYERTISQGEGKFMNIPRLDIALDEKYNENGNFELGKLVDLWDSGLVESRLTMKQIEDNGHYGKAKTIYFGSRQSAYHFCFYQKDIEQAKKLGLDIDLIHSSLKFKNRYEVRMCDDVALEFVRKSLNEKIDMARLAVWVINSKIKVFERRNGDKVLNREWYSLLGEVDKIGFSTSPVETGFFDKQYRWLNENVSGVTALIKKWENITGDNKLKKILFDGEISDKNWKKLEQARVAYEKNLQESRY*	rep_hall_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0061	cloud	indirect	.	.	.	GCA_025948295.1_02014
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	74666	74920	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	42246	42500	GCA_000344275_1_7_98	GCA_000344275_1_7_98	+	123291	.	.	hypothetical protein	MRKIYKKVGTDSVVVNNSNLVCSTDCGLKSISHYLPTFEGNENLTVIPVEPERMFLSHFRDYVIDWSRMPDEVNAILDMKKKGE*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0062	shell	indirect	.	.	.	GCA_000195045.1_02271
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	74933	75106	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	42513	42686	GCA_000344275_1_7_99	GCA_000344275_1_7_99	+	123291	.	.	hypothetical protein	MKGKDKDPVGSSLTRKIQEYVKAKKIDFIVDLIIAGFIFYIVYSIVTGLWVLLNIRY*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0063	cloud	indirect	.	.	.	GCA_000222705.2_00206
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	75137	75469	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	42717	43049	GCA_000344275_1_7_100	GCA_000344275_1_7_100	+	123291	.	.	hypothetical protein	MSKKKITDEKLRKLVFLIPARYFYEGVVTSEKARNYQDYIDFQCQTYRKTKNRKDWQEVKRLTREYEEFLANEVDIKRKLLLFGLMKRDQKERQSVYSLLVKKYHLERWV*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0064	cloud	indirect	.	.	.	GCA_030440055.1_01706
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	75713	75916	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	43293	43496	GCA_000344275_1_7_101	GCA_000344275_1_7_101	+	123291	.	PDB:2FJR_A	Repressor-protein-CI	MKIFGKRLREVRKSKKLTQQQIADEIGVNRGSYSNWEKGKREPSFENLVKLADLLDVSLDWLFGRDR*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0065	cloud	indirect	.	.	.	GCA_002197205.1_00518
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	75991	76263	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	43571	43843	GCA_000344275_1_7_102	GCA_000344275_1_7_102	+	123291	.	.	hypothetical protein	MALQGKDKQVIELSNELAKKLKEKDFSQSWSLAGELNGLLKNEEELTLSYQVIQCIKNDLTSYYDMNKAYNKVANRAFAIGSNLERSASI*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0066	cloud	indirect	.	.	.	GCA_001115245.1_00141
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	76324	76743	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	43904	44323	GCA_000344275_1_7_103	GCA_000344275_1_7_103	+	123291	.	.	hypothetical protein	MKLSDLIDHVEYVSDDKGSLKCAEIRETSEDGKILNVYCLHSMTLSNLIVISDDLEEEIDEVLIDVPCRMKIHLNDIDVSSRTCSFTCDLYKFHVFIEEMSNRRNLIRQVELQINANLESGKINLLELLEIRPVLKSLE*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0067	cloud	indirect	.	.	.	GCA_000344275.1_01395
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	76778	76897	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	44358	44477	GCA_000344275_1_7_104	GCA_000344275_1_7_104	+	123291	.	.	hypothetical protein	MFYMLSDILSLLTKKYVYFEGIKVLERDIENYSMILNDF*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0068	cloud	indirect	.	.	.	GCA_000344275.1_01396
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	76912	77280	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	44492	44860	GCA_000344275_1_7_105	GCA_000344275_1_7_105	+	123291	.	.	hypothetical protein	MSIKVIYDSYSDVCKDYAYGKSFLDLPDKIIERLDEHFDGVEFEQFDGCNPDNVYINSFTEVDTQEALIDFAGILNHGEYEQLVNEERLSAYVEEHEEEITSRLEDSYVFLGHEGDSWYFLQ*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0069	cloud	indirect	.	.	.	GCA_023109395.1_01294
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	77300	77527	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	44880	45107	GCA_000344275_1_7_106	GCA_000344275_1_7_106	+	123291	.	.	hypothetical protein	MASRVLIKNPKNGRQAWFSLPLYFGKFSVIDLTGSYDETIEIVDYEGLGFIGYGLFTVADLEQLNRQVEGYFVSG*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0070	cloud	indirect	.	.	.	GCA_001578725.1_01067
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	77524	77997	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	45104	45577	GCA_000344275_1_7_107	GCA_000344275_1_7_107	+	123291	.	.	hypothetical protein	MIANIRVLREGNFEFLCELDIMKFTQEQILERMNERGIDKGNFFVCGISDWEVDKVMSLDEVYLLKKAVLELYDGDEFIVKFQLQRYVPVIQIVTTYYRFCSKDEVKTMVELTKELDYESVINYFFRCGSWVTVFQGFIDQGEVLNTPQGFYRKVVL*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0071	cloud	indirect	.	.	.	GCA_905373855.1_00430
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	78022	78957	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	45602	46537	GCA_000344275_1_7_108	GCA_000344275_1_7_108	+	123291	.	cd16386	N-terminal domain of conjugative transposon protein TcpC. This family contains the N-terminal domain of conjugation protein TcpC and similar proteins. TcpC is required for efficient conjugative transfer, localizing to the cell membrane independently of other conjugation proteins, where membrane localization is important for its function, oligomerization and interaction with the conjugation proteins TcpA, TcpH, and TcpG. N-terminal region (sometimes referred to as central domain) of TcpC is required for efficient conjugation, oligomerization and protein-protein interactions. TcpC has low level sequence identity to proteins encoded by the conjugative transposon Tn916, which is responsible for a large proportion of the tetracycline resistance in different pathogens.	MRNFELKKPRKVKQKQIKMKKISQKRSNQIFLFCLAFFVFLCGLTIFISMKTAVKVNERLSNTAVVETKKETDRKLEQFLDGYVSRYFTYNSQAGSSDDDVSKLNNYYGSVPDVKNQGQLKQEMSVVSARLLTAKDGVAVYRVVYDTKKDDKSQRVGIEFSIPYGEKDGKYYVSGLPWFSPVSDFKADGVEKSSMVSLVAKDDMEEGKRKKLVSFLELFFKNYTTSQANLDLISKDIKSIGGATFKSLDYSYFKEKDGKILAYVQVTFEVAGTTHSENFSFELREDKDSYFVEKMDHTIPLDYNKKDDEGE*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0072	cloud	indirect	.	.	.	GCA_000215385.2_01423
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	78963	79181	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	46543	46761	GCA_000344275_1_7_109	GCA_000344275_1_7_109	+	123291	.	.	hypothetical protein	MALFQFLVQKLGLPILAYFAITKGLEAWKDQKLGKLFVIALVGGFLYYFMESPEAVLKATAPIWKYLSTLFN*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0073	cloud	indirect	.	.	.	GCA_001578725.1_01072
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	79191	79583	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	46771	47163	GCA_000344275_1_7_110	GCA_000344275_1_7_110	+	123291	.	PF12648.7	TcpE family	MERKDKKLYVYTTAFRQPIWVHKLNDDYSLPFAVKMSAIVYCLVILVLTWFILGFIPSLDWGWRFMGSVFAGWRFGNLLADYKLDGKTLFRFIYEYLKFWKEYDSQRREMYICKGIKHEKVRIIKRGINE*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0074	cloud	indirect	.	.	.	GCA_000195125.1_00299
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	79567	82071	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	47147	49651	GCA_000344275_1_7_111	GCA_000344275_1_7_111	+	123291	.	pfam12846	AAA-like domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	MELTNSIWSIADGLILLKDGTVLSVFEVESQIVNTIEDNKKETSKDLVYNCLASLYEYNDVSIHSLHIDLELAKKISLLAQDIEQGQGTSPLGNYVISTMKSRLEEEVSYLFEYKHYLVVPLKSVNVTSDFKLTVEQTIATYRKNILKMAGFEEMPKIDWWKTWQNQKDMIQTKLHALNVKEVVKADLELLNRLHFRGGQFYDKESELIALENSIENVDETIIEVVDGNALKLTNGQETSYVATIPVVSYPKNVSYLHLQEELQNLEFPVDSVYKIRFSTKRGFFSLFSRARNKRKNLSNTVEETAENDDVQKIEVLESHQLLEDFQEKHDNKELMITYLHTLTITADSLEELNLKFDILFARLKELEVEVVKAVADRVYLFYKSRLTEILDNGRESFLQYGSLRGLCENLMFTTKKVGTEIGFPIGRVDNEISSWYGDFQKALDSSTNVVFSNLLQANKIGVRGKETSNPHTAITGSTGNGKSFLTKLLFTYHSLLKTKVLYIDPKAEMKRQYQAVLSKLEAEGKFEELQDYIKSINFVTLDMKDKKNQGVLDPFSFLQDESELTELATVLVGSVLDKDTYIKVQPYLLDSIDKVLERRSAGEKVGMLQVFDELEKNEKEDVATAGYFLKRISRNSLLSLCFSDGVQDVLKVDNKITIVEITGLDMPKGTDKDEMTETQLRSLTVMYALTYFCAIFGEREKDKETMLYLDEAWQIMSTPAGRQVVNRIKRTGRSFNNFLVLVTQSVKDLKTSEDGTGFGTVFAFPEHSETGAILEHLRVEDDELSRAWLENQTMGQCIYYDTFGRKERITVDGTIYPELMELFETVETELVAV*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0075	cloud	indirect	.	.	.	GCA_000344275.1_01403
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	82082	84148	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	49662	51728	GCA_000344275_1_7_112	GCA_000344275_1_7_112	+	123291	.	.	hypothetical protein	MRKNILLVFICSFFLFPAFVKANTASDFLPNNNFNIIEFDKNTNKPKLKESSESTKELLYNAKKAKDKEAEIKKQNESKSKLTYENYKSKMSDLTSKVYFDKKFFGFDSNINYFFNSLVQAVFWVGKLVFYVIAELYSAVESMSDVSSLLNEVVKNSSKVFSSLFSQEIIYMVGASMAAYLLYIFATGKGSFIKTLIKMLLIYTCIGVYFIQFSVDGQNKYLLTHVYDAFRTTTITLNGEITKTLTGESKDGVETYFSETLLKGYKYMNSPVNDKGEFVLSEKEFEDLASYKQGDGDHLVGEKKIKDIAKDKDPENKMLKNEWGSKFMYAFASDVDIIVMGTIYLLLGLSRFFFLIVFILLIVLLPFILILSLFPKMEHLLVGFNKKAISMLALSSIMLLATTLFSFFYNTLTKFVSTAVGGDLLVTVFLKALLLFLMWKYRYSLLSTFSRVTDSPVGKIGREISNSRVIRNLEGRLSRSGMVGLKSDKIGLKSVKDGLKVGSQFAKGGLKMGKDKLSENLKSLRKESPLVDSLADKAGSVKNRFTLMKEQKNASVNSLKEKGSKALAKLYGVRANAFREGSDGRKLLNEKKRIKTDNAEKYAGQKNASREAVQRLKEERAKKREQRFKEEQQRSVKQKMQTTKTINTRAVGRIKSDVKSARNDIENSEQYKSKKEKRLEAKRRKVDI*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0076	cloud	indirect	.	.	.	GCA_000344275.1_01404
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	84148	85248	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	51728	52828	GCA_000344275_1_7_113	GCA_000344275_1_7_113	+	123291	.	PRK08581	amidase domain-containing protein. 	MGKKTAKRLGLLVGSLLPILLIVLLLIASVIGVVSASGSSSSTTGKRTRLTAQEVAQKVNISVERAEDAIKILNWQLSKEKFTLEGASGSLANAERESGFDPKLTNPSGGVAGYFQWSGWDNTINGDRWANASSRTLDSTVELELMSHELNHDKKRVKDYMQKATDPFESAKYWSEHYEGVSLSDGQTKLEKLEKDSKKWYEVFKGTIESDGSSSGNAIAGSLDIAPGEVAMDIPNGYSIDKEITKEGYITESYPYGECTWYVFNRAKEFGIQFDPYMGNGQDWAHKSGYEVTNTPTKHSAVSFQGRQAGGHPTYGHVAFVEDVKDDGSILISECNYVKSGQGTGITDYRVFSAEEAKNFYYVIGK*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0077	cloud	indirect	.	.	.	GCA_023109295.1_01617
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	85268	86092	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	52848	53672	GCA_000344275_1_7_114	GCA_000344275_1_7_114	+	123291	.	.	hypothetical protein	MNKKFVTLLSVAVLSAVTSGVYADEVNLGGNAPSSTDNTGLVVAEKPTESSVEKPAPKVNENLDLGGSADKVQDKDNTGVVVEPTTPSEKPKAEKPKEDKPSENLGKDSEKEQEKDNTGVVVEPKTPSEQPKEEKPKEETPKEDKKPTVEDTPEVKEAKQKAEENVGVKETDEPKPLNVTKEEIKEQPIETNTGHTVVSTNQGKVVVETEEGYYQEKEPYEIGAVKQKDGTIALKDKEGQLKVLPNTGTASTIFATIWGLIGLVATIYGRIKLN*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0078	cloud	indirect	.	.	.	GCA_025908845.1_01743
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	86103	86930	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	53683	54510	GCA_000344275_1_7_115	GCA_000344275_1_7_115	+	123291	.	.	hypothetical protein	MKELFRILKESDKLGYKLSAICGVNWLVGQLFKWQSLVFEMIACAVLIKEISAILEISPNYLGLLMIIFILSDSFSKLRFGVERFIYSFFGSFVLVSIFLTAVDFPFQENEFSLWILMALISVGIYQFMKWFQTKLFQRYLFKNILNKEYLGIKKMTDPFPPEINFYVDEGESDASQRMVMINQRVVKEAYQGIVELSFLNVERFTGITYFREPLSGFKAPLKEKFSDLDKVYHLVFRVYPFGKELDFYFKLIRLDLSRRKAFTVKGVSVKVVNN*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0079	cloud	indirect	.	.	.	GCA_013488045.1_01901
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	86972	87289	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	54552	54869	GCA_000344275_1_7_116	GCA_000344275_1_7_116	+	123291	.	.	hypothetical protein	MDQVKLLEMYAVKLAQRLREGQNYLEFTASRDTGYGIETMFVEVKSYNQYVRVAYHYEGCHANQKLPKKHYASVSVLVEQCCSFDFTRGGAYTYFPDIEKLLEQL*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0080	cloud	indirect	.	.	.	GCA_901543815.1_00736
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	87731	87982	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	55311	55562	GCA_000344275_1_7_117	GCA_000344275_1_7_117	+	123291	.	.	hypothetical protein	MIKEFGVTNLEVTKDDICKNPNNPILRMYDDDELIGTFSILTGEVLEDFDLADYDVRFAQKQIELNRDNYLETWRDYVGLLHA*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0081	cloud	indirect	.	.	.	GCA_024294705.1_00138
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	87930	88220	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	55510	55800	GCA_000344275_1_7_118	GCA_000344275_1_7_118	+	123291	.	PF13711.6	Domain of unknown function (DUF4160)	MITTLKRGETTWGCYMPKYSFLKYGIEIRPNEHNHKGQMAHIHIYIHGEEVGSMFLNGELRDGKLKSKDMKIVRQYVLENADELQALWNEYQNSAY*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0082	cloud	indirect	.	.	.	GCA_005890525.1_00547
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	88286	88714	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	55866	56294	GCA_000344275_1_7_119	GCA_000344275_1_7_119	+	123291	.	.	hypothetical protein	MSNNSDKIKQFFLDTILRNHSGLSEVYRNKINSFSDEELKVEYSELKSISERKGTIANSLILVMFLAFLGGLYKVFVDFAGEVTKAYGVSNESYVLVNGLFILSVVIFVIVLFFIVFYLFRVSDKKKKFYYVEVLMKERGLL*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0083	shell	indirect	.	.	.	GCA_000257765.1_00123
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	88719	89126	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	56299	56706	GCA_000344275_1_7_120	GCA_000344275_1_7_120	+	123291	.	.	hypothetical protein	MREYLDTIFEEILLNVIAQFFYVVGTMYYLHELGTFNDSVKNITNPVAVMFKDDGKAWWLLAFALILTVIAGLLLWYHVQVFSRLSGYSMATLFLFILILVLFIGLIIKDINNPILRMAIIVIFGGSAAFTVVTS*	.	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0084	cloud	indirect	.	.	.	GCA_015555235.1_01715
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	89299	89634	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	56879	57214	GCA_000344275_1_7_121	GCA_000344275_1_7_121	+	123291	.	COG4707	Prophage pi2 protein 07 [Mobilome: prophages, transposons]. 	MKESKQVFNIEVPIPSDMVLISRSEYLDLIQKEEIGQWWTIDKVEDLLSISKTKLVNDILLNPTIKREVDIEQNEEGFVLYPKSKGSPYRFLARKTREYFDKNYQKISLML*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0085	cloud	indirect	.	.	.	GCA_000229725.2_01653
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	89672	90811	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	57252	58391	GCA_000344275_1_7_122	GCA_000344275_1_7_122	+	123291	.	PDB:1Z19_B	Integrase	MASYRQRGKNKLWDYRIFDKQGKVIATNSGFKTKREAMNEAQEKERKLFQSNYTARFDSKSTLYELWKDWYNLVILPSEKAKATKEGYYARGQSIERIFSAIPAMSLNHQEYQSRLNEFGEKVTKDHLRRINADIRSAIKFSQRSGLQITDITEDVKIFGLEAGNVDDKYIHSISEYKDLLSHLQSKFNYRESVIPYLLYFLFKTGFRVGEAMAVCWSDIDFDNKTIKTYRRFVGDRQEFVPPKTKTSIREIPIDDDLAAVLKTLQIEQDKILFDRKELKKHDLVFYDRRYKIPTNSGLNKSLRVCLLELGIGNQEMTATAGRHTYGSYLLAKGVDIWVVARLLGHKDIQQIIKTYGHVLQEVIDKEYELIRQFMLDKE*	common_virus_hmm	common_virus	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0086	cloud	indirect	.	.	.	GCA_000392875.1_02651
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	91076	92074	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	58656	59654	GCA_000344275_1_7_123	GCA_000344275_1_7_123	-	123291	.	1JEQ_A	ATP-DEPENDENT DNA HELICASE II, 70	MNFFSKLFNLKQNNHTRDTNSVCNNFYLNKLECGLTPGQLILIDWTQKTGRNYNFPRYFKYSLQIDPESTHNQLYKLGYFTKNKTLSYLKVVELKTILSKHNLPTSGKKAELITRIINNVNVEKLDIPFEFKLTKEAQNLIIEYNDYIKAYYDKDITMEDYCKEKNNISFRASFGDVKWSLLNKQAHRNTISGDFGCLSNTRNAQGRHLEQEGNIRHSLIYYIESLIITISGLENNFSATDYPVYYPDLISDYSLKHIQTLIESLSDDDYDFAFDEALFLFSILNANHFLSKEDIDYLRFNLPCSTTEEINNYLKKYECYSPLNNLELDDFE*	hhsuite_tools	hypothetical_protein	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0087	cloud	indirect	.	.	.	GCA_002073515.2_00147
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	92117	92923	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	59697	60503	GCA_000344275_1_7_124	GCA_000344275_1_7_124	-	123291	.	PRK10513	sugar phosphate phosphatase; Provisional	MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKKAGVKVVIATGRPIAGVAKLLDDLQLRDEGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANRNIGKYTVHESTLVSMPIFYRTPEEIADKEIVKCMFIDEPEILDAAIEKIPAEFYERYSINKSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGNPELKKIAKYITKTNDESGVAHAIRTWVL*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0088	persistent	indirect	.	.	.	GCA_000155955.1_00189
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	92933	94240	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	60513	61820	GCA_000344275_1_7_125	GCA_000344275_1_7_125	-	123291	.	COG1078	HD superfamily phosphohydrolase [General function prediction only]. 	MNEKVFRDPVHNYIHVNNQVIYDLINTKEFQRLRRIKQLGTSSYTFHGGEHSRFSHCLGVYEIARRITEIFEEKYPEEWDPAESLLTMTAALLHDLGHGAYSHTFEHLFDTDHEAITQEIIQSPETEIHQVLLQVAPDFPEKVASVIDHTYPNKQVVQLISSQIDADRMDYLLRDSYFTGASYGEFDLTRILRVIRPIENGIAFQRNGMHAIEDYVLSRYQMYMQVYFHPATRAMEVLLQNLLKRAKELYPEDKDFFARTSPHLLPFFEKNVTLSDYLALDDGVMNTYFQLWMTSPDKILADLSQRFVNRKVFKSITFSQEDQDQLATMRQLVEEIGFDPDYYTAIHKNFDLPYDIYRPESENPRTQIEILQKNGELAELSSLSPIVQSLAGSRHGDNRFYFPKEMLDQNSIFASITQQFLHLIENDHFTPNKNE*	mmseqs_cdd	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0089	persistent	indirect	.	.	.	GCA_000160675.1_00044
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	CDS	94312	94689	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	61892	62269	GCA_000344275_1_7_126	GCA_000344275_1_7_126	+	123291	.	1R0U_A	protein ywiB	MKIRMRNRIQFDEQLEVIDQLYDVEVREKGDYSYLLFYNEEKEKVVLKFHSQELVMTRFSKPNTTMRFLKESDSLAYIPTPMGMQEFIIQTNHYKLDEQKIELAYQLQNQEGHPFASYQLEITWG*	hhsuite_tools	nonviral_gene	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_CDS_0090	persistent	indirect	.	.	.	GCA_000227805.2_00638
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	61219	62061	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	1	843	GCA_000344275_1_8_73	GCA_000344275_1_8_73	+	120863	.	7JR7_B	ATP-binding cassette sub-family G member	MIALLKRNFILYFRNRSGVFFSLLGALISFLLYIIFLQKNLTDSWSQLPNSTNLLNNWLMGGTLAVTGMTTSFTALKQMVQDRENQVDQDLFLTDLGNWGLQASYLISSIVISFVMQVFMYAVMSFYFKESPVISHLPEIALIMLLSSLLSSLVNVLLIYRFQSVDSLGKLATIVGTASGFLVGTYIPIGVLPDSAQLFMKCTPATYIASLYRQVLMKERLETAFSGNNSLLQEFQEKMGIQINWQELLTKEETYFIVVIISLVAILLWLLFVKVFSKRK*	hhsuite_tools	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_019929565.1_00184
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	62080	62535	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	862	1317	GCA_000344275_1_8_74	GCA_000344275_1_8_74	+	120863	.	PRK14084	DNA-binding response regulator. 	MKIRFEMKTEFSEKDPHILIQAAQLTDQAREVMEYLEQFSTTNQVVIPIRTDDHLVMVKIEDLILADIDKNLLTIYTVDGIYKTKETLTNFQNRINRRNFIQISRHSVINIDHLESLSDSFSGNMMAKMTRGIKSSVSRKYVKSLMDYLGL*	mmseqs_cdd	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0002	persistent	indirect	.	.	.	GCA_003968865.1_01802
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	62545	62964	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	1327	1746	GCA_000344275_1_8_75	GCA_000344275_1_8_75	+	120863	.	PF11457.8	Protein of unknown function (DUF3021)	MKRLIAYFVSGMRTASFVYLSLVLLAQFYSGITYPAPTTKNILALFLMSGIMGVLTLILERLEFLAYSMRVGVHLLATATILVLTYLFFGWGSALLSPLLWFFFLLIYGLIWLYQIWQTHKLTQRINQALEDKRKKTNH*	hhsuite_tools	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0003	shell	indirect	.	.	.	GCA_000186545.1_00944
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	63058	63753	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	1840	2535	GCA_000344275_1_8_76	GCA_000344275_1_8_76	+	120863	.	COG1670	Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]. 	MPVNEYGQIIGESMEGYTPGELPSIDFLEGRYARIEALSVEKHAEDLLAVYGPGTPREMWTYLFQEPVADMEELVTVLNQMLARKDRFYYVIIDKATGKALGTFSLMRIDQNNRVIEVGAVTFSPALKGTRIGTEGQYLLARYVFEELNYRRYEWKCDALNLPSRRAAERLGFVYEGTFRQAVVYKERTRDTDWLSMIDKDWPQVKARLEAWLAPENFDKNRRQYKSLREF*	mmseqs_cdd	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_000735365.1_00477
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	63765	64181	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	2547	2963	GCA_000344275_1_8_77	GCA_000344275_1_8_77	+	120863	.	PFAM:PF09390.9	acetyltransferase	MITIRRQEIVKLEDVLHLYQAVGWTNYTHQPQMLEKALSHSLAIYLALDGDAVVGLVRLVGDGFSSIFVQDLIVLPSYQRQGIGSDLMKEALGDFKDAYQVQLVTDQTEKTLGFYRSLGFETLSTYDCTGMIWVDRKR*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0005	persistent	indirect	.	.	.	GCA_002847745.1_01395
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	64651	65646	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	3433	4428	GCA_000344275_1_8_78	GCA_000344275_1_8_78	-	120863	.	PDB:1XO0_A	Recombinase	MVELEQQIQEQELGINTNLTLDQYWDIYSEKRLSTGRWNDTSYYLNDNLYKNHIKPKFGSILLKNLDRNEYELFISEKLQNHTRYTVQTLNSSFMALLNDAVKNGNLLSNRLKGVFIGQSDIPAANKKVTLKEFKTWIAKAEEIMPKQFYALTYLTIFGLRRGEVFGLRPMDITQNDNGRAILHLRDSRSNQTLKGKGGLKTKDSERYVCLDDIGTDLIYYLIAEASKIKRKLGIIKEQQKDYITLNEKGGLINPNQLNRNFNLVNEATGLHVTPHMMRHFFTTQSIIAGVPLEQLSQALGHTKVYMTDRYNQVEDELAEATTDLFLSHIR*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0006	cloud	indirect	.	.	.	GCA_015262365.1_01980
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	65640	65798	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	4422	4580	GCA_000344275_1_8_79	GCA_000344275_1_8_79	-	120863	.	PDB:1XO0_A	Recombinase	MKYNKTKYPNIYYYETAKGKRYYVRRSFFFRGKKKKKVKVVSQLSLKLVQPW*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0007	shell	indirect	.	.	.	GCA_000421785.1_01890
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	65970	66389	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	4752	5171	GCA_000344275_1_8_80	GCA_000344275_1_8_80	-	120863	.	PFAM:PF07553.10	superinfection-exclusion	MKKEKDSKPFYKKVWFWILVAILAIGGSNALTKQTSSKADEEKASALKTAQELVESKASFSEKTLLWYLTESASHKYSKKAAQYAVENVGDVWVNEALDIAKEERSEGKTDQEILKSLTDKDAQFTEEQALKAIEKLNE*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0008	shell	indirect	.	.	.	GCA_000159495.1_02743
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	66399	66788	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	5181	5570	GCA_000344275_1_8_81	GCA_000344275_1_8_81	-	120863	.	PDB:3DTE_A	IrrE-protein	MTEKEIISHFQIRIIDFDGDLMPDELGFYEKETNTAFLSSKLSKKERVKVLLHELGHKDHTRSEYQNARLRCENEADRNMIHHLVKDAIESLDDPTEFDYLKFMSYYNLKTVTNEIMVKEEYYNLANII*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0009	cloud	indirect	.	.	.	GCA_000960025.1_01016
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	66801	67190	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	5583	5972	GCA_000344275_1_8_82	GCA_000344275_1_8_82	-	120863	.	PDB:1PRA_A	Repressor-protein	MLRKVEISMFLAFDRIKELADKQKISLNILEEKLGYSTNYLYSLKKGNPKSDRLQEIADYFGVSTDYLLGRTENPNLADDTKEYTWQGKVLNVEEMASNVMMFGGRELTDEKKKIIQSIIEGYLKEAGD*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_025398935.1_01906
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	67472	67954	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	6254	6736	GCA_000344275_1_8_83	GCA_000344275_1_8_83	-	120863	.	.	hypothetical protein	MKSSFFHYLKEIILYGVLVPILTVIVGFHLFTTFYPISDSLLTDFLKAFTEQRILAIVFVLILCFIFFGSIYYCISCGRNRKLIPDKVYTQITTYISSVGLATAVIAVATLTLTELQFSILTGWIAFIALLLPLLKFKVQYSTYQSSDNVAQKTTENKAN*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_000344275.1_01547
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	68009	68212	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	6791	6994	GCA_000344275_1_8_84	GCA_000344275_1_8_84	+	120863	.	PFAM:PF10078.8	transcriptional-repressor	MSKELKIIKAKIKTRLIELDMTQVELAKQVSVASSVISELLKYGKGSDYVKEKVVDILGIENPWRNH*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_023109515.1_02020
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	68355	68552	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	7137	7334	GCA_000344275_1_8_85	GCA_000344275_1_8_85	+	120863	.	.	hypothetical protein	MNNAAQKVTRIDKDAWDIATELANKYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0013	cloud	indirect	.	.	.	GCA_905373855.1_00706
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	68563	68724	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	7345	7506	GCA_000344275_1_8_86	GCA_000344275_1_8_86	+	120863	.	.	hypothetical protein	MNELVWFYFTIIINILIGFATYYASKRDRKKRINGFKKIQDDELERIRKKFDL*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0014	shell	indirect	.	.	.	GCA_000019005.1_00035
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	68758	69474	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	7540	8256	GCA_000344275_1_8_87	GCA_000344275_1_8_87	+	120863	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYANSRKAIFDHVDDDDKTDGVTIRDAMGRNQNPVIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKKGGFIREDLDEDAFIALFTGQKKLREQQATMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKFAEAALKYWMTWEPSTNTKMKIMKLNSFDEI*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_001814215.1_01470
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	69487	69744	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	8269	8526	GCA_000344275_1_8_88	GCA_000344275_1_8_88	+	120863	.	PFAM:PF09035.9	Excisionase	MDNVLLSLTDWIKSIIKDTITRLVEIEKDSDHYPELMDVGTTCEFLGINYDTFSNNYRYMKGFPKELPGKKWSKRAIKEWLSNQL*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0016	shell	indirect	.	.	.	GCA_000421785.1_00044
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	69825	70037	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	8607	8819	GCA_000344275_1_8_89	GCA_000344275_1_8_89	+	120863	.	.	hypothetical protein	MNNLQIIAVCTVVSVVLIESLMMNIKLKMAMRAKKKIQFQAPQVEKGFIDFKTGRRVDIDPVTRKETFVD*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_000382805.1_01782
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	70050	71381	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	8832	10163	GCA_000344275_1_8_90	GCA_000344275_1_8_90	+	120863	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MDDFKIPPHDLVAEQSVLGAVFISPDSLITLADDLTPDDFYKPANKIVFKTMLSLLEKGEPIDATTMVSALTNQGDISTIGGINYVVELVNSTPTSKNVEHYAKLVKEKATLRKMIANLSDSLSSAYQGDVSIDDIIAKTEKSMLDISNQNTGTGFRNVADILDTHMQMVETRSQTDGVVTGLSTGFVGLDKITTGLHEDNLIILAARPAMGKTALALNIAQYIAVKEKKPVAIFSLEMGAESLIERMLAAEGMVEGYNLKTGNLSVEEWSRLVHAQGNLYDAPIFVDDTAGIRISEIRSKARKLAQEMGGLGVIIIDYLQLITGSKGENRQQVVSEISRELKILAKDLKVPVIALSQLSRAVEQRQDKRPMLADLRESGSIEQDADIVAFLYRDAYYQKEQADSQESNNVTELILEKNRHGSLGTVKLYFHKEYTKFSSVEG*	rep_hall_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0018	persistent	indirect	.	.	.	GCA_000260715.1_00205
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	71382	72143	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	10164	10925	GCA_000344275_1_8_91	GCA_000344275_1_8_91	+	120863	.	PFAM:PF09681.9	phage-replisome-organiser	MAERRMVSKTIMQTQKFLRLPLETQALYVHLVINSDDDGIVEAFPVVRMIGASEDSLGLLVIKQFIKPLNQDMVYFITDFNEQNKIRPDRHKPSIHRNLAIQQLGLEVDGSRLVEPGKVVLELTEEGQTVDGQVTDECPHSIGKGSIGKGSIGEGSIDNIPYKEIIDYLNSKTGKKYRDNVQKNRSLIKARWSEGYRLDDFKQVIDNMVKDWSGTKYAKYLRPETLFGTKFDGYLNQGNVVKREKKTDERLGF*	rep_hall_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0019	cloud	indirect	.	.	.	GCA_023109295.1_01998
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	72144	72965	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	10926	11747	GCA_000344275_1_8_92	GCA_000344275_1_8_92	+	120863	.	PDB:4M4W_K	Replicative-helicase	MKQFKQFKTRIVLDDVCEIHGCHLWSVKIPVKGKVEEINQCPECEKENIRRFEKQLNMESEVKSKLSDTYEVFARDSIVSSKLASKSLHDYEIRVDIDENAMNFVKRLERCYAKGETGNAIITGPSGVGKSHLTYGFARFLNEQFKSYDEPKSVLFVSVVALFDKIRESFEFDNGFSEAKMVKLLSEVDFLFLDDLGKESRKADTKRNEWAHQILFKILDNRTDTIINTNLSSEEIKELYSDDFGNGALSSRIFEGATGRCFVYPAGMKDRRY*	rep_hall_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0020	cloud	indirect	.	.	.	GCA_001589065.1_01939
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	73081	73749	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	11863	12531	GCA_000344275_1_8_93	GCA_000344275_1_8_93	+	120863	.	PDB:4U7P_B	Adenine-specific-DNA-methyltransferase	MDIENKNNHFINLDLADYKRLFGDNTLFDVLDKLPKPDLVIASPPCESWSNASAMENGNACWKRNDVSDSLFAPQVRPSPFTIRANQDYESAYINYQYDRQFLKRVNGELTAFNTIEIIKRYRPQFWVIENPAADRLWPYIEDIIGFRIPYKNLARYNNYDYPLQKRTIFGSNIELNLKNKIIKQDIEWKNFSKSYNERSNIPKKLVSEIFEKIYKEFCKDD*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0021	cloud	indirect	.	.	.	GCA_905370285.1_00158
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	73742	73969	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	12524	12751	GCA_000344275_1_8_94	GCA_000344275_1_8_94	+	120863	.	.	hypothetical protein	MIELYFVYNGHCKFYLGSFNNVDELIERMKDHQWAFSGITRPKFKKHIGKDDVRFDYGAIDCYYLATKSTCREPR*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0022	cloud	indirect	.	.	.	GCA_030440055.1_01937
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	74085	74273	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	12867	13055	GCA_000344275_1_8_95	GCA_000344275_1_8_95	+	120863	.	.	hypothetical protein	MKYSKQTMIDGLKHSIEKTEKEIEEYSKPCDRRVAQGRTAHLEFLKKKLKKMKAQLEELENE*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0023	cloud	indirect	.	.	.	GCA_001553685.1_00099
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	74266	74925	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	13048	13707	GCA_000344275_1_8_96	GCA_000344275_1_8_96	+	120863	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIEKIGNLDKLYGEKFYVALDDVLDLVKQLDEPEAGHADEAPRYVKNVLARLRELPLHDREVWLKAIMSEFEQDFSHAKWREGYEQGKVEGMVEREKVTVPQFVADFITEQKKLGYTLSYSIDASMSDRVAEWYWDNSEVFALAWILGYEVEKRYIVTLKSSGQKLYYHTEDEDYIFSSYDGVFYSGYHTKTDLEENGMSWIFDCEGVKVQEVE*	mmseqs_cdd	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0024	cloud	indirect	.	.	.	GCA_900755475.1_01872
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	74925	75320	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	13707	14102	GCA_000344275_1_8_97	GCA_000344275_1_8_97	+	120863	.	.	hypothetical protein	MNNEVFEELKKLMSYFPDSFINRQLELILIPKTNTYFSLRDCLTKKDVISNVLMYCTRDITKAMPYQQQKRNIDFYVVNRTRLEKYLGLSINVNVVYHCLGNGINKELTHRFIDSGFNMDMLLKEIEESGK*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0025	cloud	indirect	.	.	.	GCA_026782195.1_00899
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	75317	75655	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	14099	14437	GCA_000344275_1_8_98	GCA_000344275_1_8_98	+	120863	.	.	hypothetical protein	MSYDLEILGRIESGDYICIDEPENSSPTYNLGRMFRIAMDWDFKQGTIYNVAQIFENIQRGISELEQHPEKYVQYEPENKWGTVSSALEDLRSLRDCILRQDIDTKYLYVRW*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0026	cloud	indirect	.	.	.	GCA_013277255.1_02033
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	75657	75821	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	14439	14603	GCA_000344275_1_8_99	GCA_000344275_1_8_99	+	120863	.	.	hypothetical protein	MERPERYPSGYFIPELIEDEDIIFNKDSEYHKQKKKEKKNPIFKRNKPKNRWAL*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0027	cloud	indirect	.	.	.	GCA_001072745.1_01088
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	75834	76121	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	14616	14903	GCA_000344275_1_8_100	GCA_000344275_1_8_100	+	120863	.	.	hypothetical protein	MTRKNYIIFIRHLKKIKDLVDFYEYIADSRVCAIAIYLFLIVCSPFIALLFPIAYIERCFHNKRFIRKCVEYDWYSKEYLEEVVDIRKDDIKEVE*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0028	cloud	indirect	.	.	.	GCA_016028255.1_00451
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	76121	76267	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	14903	15049	GCA_000344275_1_8_101	GCA_000344275_1_8_101	+	120863	.	.	hypothetical protein	MSFYGGDYIDYCEYCDDRYSGIFKLKENENVLDGFDRWLKEHGRKVED*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0029	cloud	indirect	.	.	.	GCA_000344275.1_01566
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	76231	76524	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	15013	15306	GCA_000344275_1_8_102	GCA_000344275_1_8_102	+	120863	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MVERTRKEGRRLKRFIVIWILLSAGLNTWQMDRIRDLEEKKPMVIYKADNSGAEIFGKVLEKGRHGKLYTITIRDYGVFVVTKDMYDKIKIGDEVKI*	mmseqs_cdd	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0030	shell	indirect	.	.	.	GCA_009495735.1_00123
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	76525	76734	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	15307	15516	GCA_000344275_1_8_103	GCA_000344275_1_8_103	+	120863	.	.	hypothetical protein	MEEKELEELAFVFQVGQLVLHTAKSIIKDENLLGSNGMFAIDGHKFEIKISEVSEKGDDKVKVGDEVRL*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0031	cloud	indirect	.	.	.	GCA_001838575.1_01767
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	76731	77648	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	15513	16430	GCA_000344275_1_8_104	GCA_000344275_1_8_104	+	120863	.	pfam02384	N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	MTFVEHNNRQKANKFAEYVTGKSLREYLANKVKQYCGENISVFDGAAGSGQLEQFISMTDFHAVEIQHESCEALKTNFPHAIVNNQSFFTYQSDIQVDAIAMNPPYSMKLKDLPEEDQQAIKELYPWKKSGVVDDIFLLKSMTYTKRYGFYIMFPGIAYRQSEKKMRELIGNNLVELNVIQNGFEDTSINVIFLVIDKEKNSPEISKEIYDCKTKKVEYEESDTLDSDFRWVAPSKPVEKEEIDIDQVNAELDQMVINHLEKHLASQLILIQLFNADIDLKSFITKCHKVLDDYLLMYNFAVGLE*	mmseqs_cdd	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0032	cloud	indirect	.	.	.	GCA_000222045.2_01615
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	77645	78190	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	16427	16972	GCA_000344275_1_8_105	GCA_000344275_1_8_105	+	120863	.	cd17291	Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.MgeORF438P TRD1-CR1 and TRD2-CR2, and to Escherichia coli G5 S subunit (S.Eco16445ORF5013P ) TRD2-CR2 and Acetobacter pasteurianus IFO 3283-01 S subunit (S2.Apa3283ORF14230P) TRD1-CR1. The recognition sequences of Mycoplasma genitalium G-37 S subunit (S.MgeORF438P), Escherichia coli G5 S subunit (S.Eco16445ORF5013P), and Acetobacter pasteurianus IFO 3283-01 S subunit (S2.Apa3283ORF14230P) are undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	MKPDNITKYGLLDVCDLIPGKRGKVSEGAYYIYGAGKNTKGTTDKFNCESDTIRLTRKGTVGAVYFHRDPFWMDDDSFRIEPKEMIDKRYLFHWLLMKREEIERCADGDNQPGLSIARLSKIKIDVPDMEYQLKVVKLLDEMSAGLEFFIGNITQIKMLEGKVLSYYNEKIGTALEGETDG*	mmseqs_cdd	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0033	cloud	indirect	.	.	.	GCA_029967835.1_04102
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	78147	78320	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	16929	17102	GCA_000344275_1_8_106	GCA_000344275_1_8_106	+	120863	.	.	hypothetical protein	MKKLEQLWKEKQMDNKLDCEDCKQVFLLEEKLDYDCVFQNGICSKCLVKRVERGLEW*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0034	cloud	indirect	.	.	.	GCA_000344275.1_01571
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	78314	78520	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	17096	17302	GCA_000344275_1_8_107	GCA_000344275_1_8_107	+	120863	.	PFAM:PF04936.11	host-nuclease-inhibitor	MVVDDKWNRDWALYSGDKFITIGTLYEISEYTGISLDSLKIYSRKYHKTHFPKGRALIRIEDEEDYGG*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0035	cloud	indirect	.	.	.	GCA_023110325.1_00079
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	78523	78972	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	17305	17754	GCA_000344275_1_8_108	GCA_000344275_1_8_108	+	120863	.	.	hypothetical protein	MPNFAEGTIKLRGRAENIKSALKYMFGAVENITIEEDTDGEIITFTTTDSYFYINGTKRAFINGKSFEINLDDDFLIIELNNFMQAWRAIPENYIEISEKFNVDIKIFTFEQGLEFTQEIEISKGKILKDITLKYDNYRWEVAFSNLGG*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0036	cloud	indirect	.	.	.	GCA_000344275.1_01573
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	78991	79398	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	17773	18180	GCA_000344275_1_8_109	GCA_000344275_1_8_109	+	120863	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPRFRAWMKSLKWMCDVTNILFDSKLLDICHQGDTERYTEMSVEFDEIELMQSTGLEDDSGKEIFEGDVILWTYWDEFEDSGRAKIVFDKGMFKLLDIHTEKEVWDSLFDCIENCNVYLQGNIYENPELLEDME*	mmseqs_cdd	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0037	cloud	indirect	.	.	.	GCA_023383645.1_01589
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	79395	79748	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	18177	18530	GCA_000344275_1_8_110	GCA_000344275_1_8_110	+	120863	.	.	hypothetical protein	MRPCKYPYSGFQNTNSKQDRLGLIEVIKYETINVSIVIREGDNSEILAKCVIRAYGETLSFIATLPVKETRFSKQKQALFKIRLYQRIEKMGSDKLLEINRFIWSNICLEEFNKVNL*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0038	cloud	indirect	.	.	.	GCA_013276505.1_01580
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	79764	80189	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	18546	18971	GCA_000344275_1_8_111	GCA_000344275_1_8_111	+	120863	.	PFAM:PF05263.10	transcriptional-regulator	MAIDIKKRLKALPYIDIKAKSKHQEIISLKSGILRGQQFDSMPKSKSNKNQTEELNVLIIDKSDQLYEEIKQMYHERDELVQAIESLDDPVENIVMRLLYIDGLSWKEVQIKLNCSLATIQRTKHKALLKLSKIYDKNDSK*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0039	shell	indirect	.	.	.	GCA_024294625.1_01001
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	80277	80843	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	19059	19625	GCA_000344275_1_8_112	GCA_000344275_1_8_112	+	120863	.	CDD:cd01192	site-specific-tyrosine-recombinase	MVVVEPIRNRDDVQLMIEWLTLHSAVKESDRQRNLMLFLSGVNLGFRIGDIVKLKVKHVKGWHVQIVDEKTDKPTKRKMPKKFKNAMRQYIKDKKDEDFLFPSRNGKHQHIKPNTAYKIIKKAAEEVGLENIATHSMRKTFGLFMYEQTKDVALIMDLLNHSSQSISLRYIGKNQDSQDRAMTKFQGF*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0040	cloud	indirect	.	.	.	GCA_000523555.1_00398
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	81009	81218	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	19791	20000	GCA_000344275_1_8_113	GCA_000344275_1_8_113	+	120863	.	.	hypothetical protein	MKGIFKRLFNKTTNRQKPLGKIVVGVEIENLSELKELTQECCKAIEHLNNCIDKLNKFELKASTSIIND*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0041	cloud	indirect	.	.	.	GCA_023110515.1_01392
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	81211	81525	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	19993	20307	GCA_000344275_1_8_114	GCA_000344275_1_8_114	+	120863	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTRADRTEFYNSGEWRGLRKLALERDHNECVWCREEGKVTTDNLEVDHIKELEFYPEFALDLDNLRTLCKECHNKRHGRFQFRKSKKLIEKNFRTDEFWG*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0042	shell	indirect	.	.	.	GCA_000332735.1_01668
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	81632	81970	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	20414	20752	GCA_000344275_1_8_115	GCA_000344275_1_8_115	+	120863	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFEVENSPVEKSTSGSDLL*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0043	cloud	indirect	.	.	.	GCA_925293305.1_00351
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	81967	83607	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	20749	22389	GCA_000344275_1_8_116	GCA_000344275_1_8_116	+	120863	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDEYIKMADRGEIAVNEERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFTEKNFFPLAKYQLFLTPFIFLFRKEDGEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFEDDKAVKIQRSGLGKIAHARTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDNADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTSREKLVACLRSPGIDLKGRSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWAERGLFTIVDGPSIDPRLLIAKLEEWRNLYQIELVCADGFRMDLLKPLLEDAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFEGDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKREIVQESNVGEFLDMIDSWDF*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0044	cloud	indirect	.	.	.	GCA_002096175.1_02059
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	83666	84817	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	22448	23599	GCA_000344275_1_8_117	GCA_000344275_1_8_117	+	120863	.	PFAM:PF04860.11	Portal-protein	MGLLNLFKREVPEVGFEFEDLERMFGNLQLKSLAIDKSAEFIARIFAKSEFKYQENGKAKSSDWDYLLNVRPNKNESASEFWQKVVYRLITKNEVLIFLTTDDQLLVADSYTRTKYAVYDDVFEFVTCRGFTFEKRFRMSEVIFLQYNNNRLQDYISDLFADYEKLHTRLVEALARNNQIRGTLKTKNNGSFNEQMRDKLQSYADGLFKSFSTKTIAIVPAQDGMEYSEHTNTTGTSNISVDELKKLRRQFDDEVADVLGIPTALIHGDMANLENSQKMFNSYCYQSLVKKMSDGLNFALVSRREYERNNLFVIIGEGQRDKFALAGSIDKLISSGAMTRNEVRSELGLESVPGGDKFLITKNYQLGEQLEKGGEKEDESNSD*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0045	cloud	indirect	.	.	.	GCA_002243215.1_00990
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	84798	85580	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	23580	24362	GCA_000344275_1_8_118	GCA_000344275_1_8_118	+	120863	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MKVIPIKGTIVSNNDRWLYDWLEWDATAPKDVVLPESGEPIEVHINSGGGDVYAGSEIYTALRSYPGDVTVKIVGIAASAASVIAMAGDTVEISPTAQIMIHNVSTQVNGDHNALLHEAGVLEGFNKSIASAYVHKTGKALDDLLDLMNKTTWFDAESALNHGFVDKIMFTNEVAPTLVASETPMIPSDFIEKMRSAMTPDIDKIAELVAEKLEAKLPDIQIDKEAFENSEFLQKKFNFPESPENNTDKAVPKGFGLFMF*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0046	shell	indirect	.	.	.	GCA_000724645.1_00920
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	85597	86718	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	24379	25500	GCA_000344275_1_8_119	GCA_000344275_1_8_119	+	120863	.	PFAM:PF06673.10	Major-Capsid-protein	MTMQLSNQFEKQRQAFLDAVANGAPQEEQAKLYNDMIESMTNEMMAQARDAAREEVSTLNPYDAKLTAEAREFFNNIEKSAPKGVEKLFPQETIDRIFEDMVMARPLLQHIGLKNAGIRLKFLKSEQTGQAVWGKINSEIQGQLKQEFNDEEAIQHKLTAFVVIPKDAEKFGPAWLQKFVSAQITEAFAAALEAAFLNGDGDNKPIGLSRTLKGTVADEKTTYAEKEAQATKLTFADSATVVKELTNVYKHHSVKADGTTPVAVEGNLVMVVNPADAWDVKKQYTSLNAQGVYITAMPFNLILVESVAQTAGKVTTFVKGRYDAFVGGGISFGRYTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLQLPQA*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0047	cloud	indirect	.	.	.	GCA_002901805.1_02123
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	86734	87024	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	25516	25806	GCA_000344275_1_8_120	GCA_000344275_1_8_120	+	120863	.	CDD:cd08054	Head-Tail-Connector-Protein	MTPEEQLHPLLKSFKERMRIFHTGEDNNLSKMLESSESVILSLVGSKDSTDPRVRELILERARYVYNDQVEFFYGNFQGDLMALSLENYKLEEKHD*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0048	cloud	indirect	.	.	.	GCA_001703535.1_02196
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	87017	87193	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	25799	25975	GCA_000344275_1_8_121	GCA_000344275_1_8_121	+	120863	.	.	hypothetical protein	MIKVLKGFYDLKEGVFRSVGQEFEATKERFDEINGALPGFVEWEDKQSEVTMSDVLSD*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0049	cloud	indirect	.	.	.	GCA_026783105.1_02165
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	87177	87569	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	25959	26351	GCA_000344275_1_8_122	GCA_000344275_1_8_122	+	120863	.	PDB:2KZ4_A	head-closure-knob	MSYQTNRPSYRYKKPEAQNGDLRTPLTFYTSKVEEGLHGRDVSHEKAFFTMGQVYSPSFKDIEIATGKSMQAKMTLKIRDPLSDYQPKNEHFVEVGDIRLGGKKWQIIDVRPDFDNRDFLIVIIGGGQDV*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0050	shell	indirect	.	.	.	GCA_000221985.1_00079
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	87562	87963	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	26344	26745	GCA_000344275_1_8_123	GCA_000344275_1_8_123	+	120863	.	PFAM:PF04883.11	tail-component	MSSGAELRGFDYVLRNIELHLGNNKVKRATSRALKAVANETLEEFKGALQVYKDTGETIESATAGRVTGLAAGVPVVKIGFGEGSRWRLVHLNEFGYGKNPHPRGFGVIRRFSETHAKTYKYRIASHLKTEGF*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0051	cloud	indirect	.	.	.	GCA_019222685.1_01784
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	87964	88344	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	26746	27126	GCA_000344275_1_8_124	GCA_000344275_1_8_124	+	120863	.	PFAM:PF05657.10	tail-component	MVKDKFNELYEALKKDESLAGISIKSFKRPDSLPNNEPSIVIKPVGPPMQAVHGSNTSLAKTFLYQVNVESVDYMECKVLQRKIEKIMEDQGFYQTSGGLDEWIPEIKRYVDARTYKGRSGLYEEY*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0052	cloud	indirect	.	.	.	GCA_023375285.1_01807
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	88367	88951	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	27149	27733	GCA_000344275_1_8_125	GCA_000344275_1_8_125	+	120863	.	PFAM:PF04630.11	major-tail-protein	MALVGFKRMTIRVLDGEATPTLGKNLFVVEGKTGEGATRTAKITGLSSEPVKTYGSDVAYFTSKRGVGDVKMEMTAVDIPHMVLAKILGHAVKDEIIYIGEDSDAPLCSVMLESKTANGTKAQVGFFKGSFSMDAEELETQKEKQEELPDDNLSFSAIASDDEETKGNYYGKYIGNDEEKIKKLKGQFKMVAAG*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0053	cloud	indirect	.	.	.	GCA_002096215.1_00900
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	89001	89294	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	27783	28076	GCA_000344275_1_8_126	GCA_000344275_1_8_126	+	120863	.	.	hypothetical protein	MAKVKFLIKNEKGQDVQKTSKEITTKDYRDYLILNEALSSDVSEVEKLDKQLEFIASLFEDLEVEELLKFTDMADIFAVFADIYSHLVGDVDPKEKK*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0054	shell	indirect	.	.	.	GCA_000421785.1_00011
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	89360	89479	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	28142	28261	GCA_000344275_1_8_127	GCA_000344275_1_8_127	+	120863	.	.	hypothetical protein	MSIRDVMDTSWEDLMGVLGETESAKAEEVMDLADFLETI*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0055	cloud	indirect	.	.	.	GCA_000223255.2_00391
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	89494	93762	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	28276	32544	GCA_000344275_1_8_128	GCA_000344275_1_8_128	+	120863	.	PFAM:PF10145.8	minor-tail-protein	MAGGTPLGQMYIELGLDVSKFNPTLNGAKNAVKYFQSNVKALDSSLKNNGKNTDLLQAKYKTLGQAIEAQRKVLDQMKKSFDTLEPGTAKFDKAAAEIERENAKLAAMEGQLRNVQQALIAVGKENSFANRINKYGDSFIKSGKKIKTFGEEVSKTGRELTTGLTAPLVASVGLITKAAVDYESAFAGVKKTVDETATVSYKNLSDGIRQMAKELPASAVEIANVAEVAGQLGIKAEDILTFSRTMIDMGESTNLSAEDAATAIAKIANILGLTSDEYKRFGSSVVDLGNNFATTERDIIEMTNRLAAGGKLAGLTAPDILGLATAMSSVGIEAEAGGTAMTQTLTAIGNAVSLTGKGAADDLNLIAKTAGMTSEEFQQAWKEKPVVALQSFIKGLKDAQEKGVNMNAILAQLGMTGIRQSNMLKSLALASDKMGDAVDRSNKAWKENTALTNEANKRYETTESQLKMFKNQITDLAIEFGGPLLKALRDGLKAGKPWIDTLAKMAKQFSSMSEEEQRNVLMWAALTAGAGPALTLFGKGIGIVGNLTKGIGWLTKGTSKAVGGISLMHKTFQAFRTTGNLSSAFKLASGGAVALGNATASASTSTGLLTTSMGTLANPLGLIVGGLGLTTAALVYLGNEKDKARIKTEEFGSQLSDTARGELRSFQKTVDETSTAVANFGTHAGDADKVSGAFKKLYEEIATAADKTNKRMEELGAKWGLSEDDIAKAKERNGQVVSNTEAMMNQINEIYQRHNGDASKFSQEEKEIILNNQNEMIKAKLSMMSLSEEQQTAAQQALNGKISSLNETQLKHTRDVLKQALDEEKKLYENSKSEWKELLDGKAIDQETYNKKIQELETKHQQTMEALGSKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEEIGKKAAEASQKVGNSHSILANYTSEMSKEVKEANDAWSLLVGNIDKNGNFQVKSNVKEVIGEAAKSAEGWEQLQFIAKTAEINSNARATIAEALVESGKWKDMTLEEKQVIVKNQAGLQAIFDSETHLKTWNSMPAEVKELLMKNADVMNKAEEASKALSNYESLTPKQKELLANDESVRKAVSRSTDTLTTWNATTTFTKDLKVDPTNVLNNGQLSIDKITAWNFTSAETKSLDAVDNTSAAVGSAILSVNSPKQEAPINLFAADQTGGVRNETSGAINAIKQYDPVNILAKNGTNDTVSEVKSGVNGIQDKTVTISARDNASGVLSGIKSWIDSVTGNFFTNIFASKHAHGTNYHPGGLAIVNDQRNSNYKEMVTLPNGRSFIPQDRDVLLPLPRGSKVLRADKTRRLMREMGVPKYASGIGIPSDAKFLREIEQAQRNITIQTTSVQNGQDTDKIVSEMAILRASLEKLLTAILNKDTNAYLDSSKVTDIVTKTQKEREKMLLRMKGVIE*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0056	cloud	indirect	.	.	.	GCA_000344275.1_01593
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	93759	95258	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	32541	34040	GCA_000344275_1_8_129	GCA_000344275_1_8_129	+	120863	.	PDB:5LY8_A	Distal-Tail-protein	MSEVTMRFNKTDLRELIEIHDIQRDVGNNRSISIDHAPRIGVNIQQQTIDAKYIKVDFSIWSKDRNTLKHKLAGIFNVDSPKELTFSDEPDKYYLAMVIDDISMQEASGRRSNGSIKFIIPDGVAHSSAYKRFDSDKNATSEAGKMVFNLTNNGTESAFPIVKVRHNAENGYIGLVNTSGALEVGDPKEIDAEIVKRSEVLLDFRGDKIVDGFARAVKIGSVTNSPENLNGTSELVTANGKKRVKLREQSSGTYNESYSTGLSWEIPADSTGEKGSLDDYIFCKLVYQLDSVTQCGFIKVTVSDTNGQFLYGVETYKRYKGLYCGFNVFATDNKGEYNFLKCFDFDSSSDRNKNPFALSRGQFELKRNDEKVQVYYNGSYYNFIVPEIEGKKSAKVHVTIGAFHGKAIIPHLYLDELLYRKDFVQVSRDIPNRYPMGSNIILDSENDSVTVDGIERAADVVQGSKFLSVPPGKSQLEVYCSSWVKIRPTVTIEFEERWL*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0057	cloud	indirect	.	.	.	GCA_000344275.1_01594
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	95258	98599	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	34040	37381	GCA_000344275_1_8_130	GCA_000344275_1_8_130	+	120863	.	PDB:3GS9_A	tail-protein	MLLTIHDANLQKVAFVDNSKQNTLNYYNDTWSRDMPTGASTFEFTVFKKAIQSDTASSKAYQYLNERAWVSFRHNGRTYLFNVMSVEENEQTIKCYCENLNLELINELVNPYKATRAMTFAEYCKEMALLNYAHLTIGINEISDQQRIIEWTSQETKLARLLNLAKQFNAEIEFDTQLKADSTLKNFTVNIYHEHDDTHQGVGRIRNDVVLKYGKNISSITRKVDKTGIFNTIRPTGKMPTVEVEESGERHLSSQRVKNADGSTTETIIRTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGPSNTEKRIIKPPKKKEKETEPEKEVLTIENLGDWSIKNERGELEFYQRGKQLYAPLSMQLYPSTFTSATAEDQWTRRDFDFDTDEPNELRRLAYLKLKQHCYPAITYEVDGFVDVEIGDTVQIYDDGFCPALIVKARVTEQKISFTNPASNKTTFANFKALESKLSDGIQAAFERLFEASKPYTIKLATDNGVAFKNSQGQTIVTPTLMKGNKVINSGWRWTVDGVIKATSSSYIVRASDINQKMVLTVSAWIDNKEVASEQLTLINTSDGLQGQKGDTGPKGDPGPKGDRGEKGEKGDRGLQGLQGLQGPKGDQGIPGTKGADGRTQYTHIAYADTISGSGFSQTNADKAYIGVYVDFNSTDSVNPADYRWTRWRGPDGLNGKDGPQGIPGKPGADGRTPYFHRAWANSADGRDGFSTTDSSNKRYLGTLTDFTEADSQNPELYKWTALFDNVQVGGKNYIRNASFLFGENKWGKTSVNGLTYNFTHSASNKGKSGLHMFSENDTVIPRWKGIYQKIPLSQPADIPVTVSALFAKDGAPQEAHIGLHFIKDGVITRQSWLDIPASQITEKYQRFSLSAKHDVPFDELRVMLYVGYDKIVNLYVTDVQLEIGNVMTDFRLSDEDVQETINSKADQALTQEQLNALAEKAQLHDIELKAKATMDQFSDLEKAYNAFVKSNIENQKKSEADLVEAGRRLELLTTEFGGMKELKKFIDTYMTASNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVIHIDNGIFTASVQIGRFRTEQYHLNKDVNVIRYVGG*	hallmark_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0058	cloud	indirect	.	.	.	GCA_000344275.1_01595
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	98609	100639	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	37391	39421	GCA_000344275_1_8_131	GCA_000344275_1_8_131	+	120863	.	pfam05895	Siphovirus protein of unknown function (DUF859). This family consists of several uncharacterized proteins from the Siphoviruses as well as one bacterial sequence. Some of the members of this family are described as putative minor structural proteins.	MAKYINSSGSLHLNIYIEQVSQDIANNSSRVSWKATVDRDGAYRTYTYGNISSLSVWLNGSSVHSSNPDFDTSGEEVTLASGEVTIPHNGDGTKTFSVWASFDPNNGVHGNITVSANYTLSSIPRSSSVSDNALSGNRQLGSLHTLTIDRKSNSFTHQVWYRVFGSDWIDLGKNHATSVSFIPNLDLARYNKKAKSGTMDICVRTYNGTTQIGNDVYSNGWYFEIPESVKPTFSGLTLIDMNTVARQLLNGNNFLQIISDIQVNFNNPSGAYGSTITGYRAEIVNKNQVTTVNGGRLGMMNFNGSATIRASVIDSRGRQSDARDITINVIEYFAPALSFSIARTGSTSSTLTVTRNAKIAPLTVSGSQKNTMTLTFKAARLGTTNFQVDTGPATGSWTSISNLVNSQANLAGNYLANQSWMVIGVLEDKFTRTEFMFNVPTESVVLSYDRSGIGVNKIRERGALDVKGDIFANDQPIQQYQLTQNNGKVLNADRDWNDYINSGLYMGSNLQNAPQGGSSWKHVQVFKHNDNWVVQVAYDFDGGVTSVRTKTNGNWNPWKYLATKDDVQKYTQGTTWQNLTLQNGWQHHPDFARVQYSKSFDGIVYLRGTAFKGRTTPETVIGTLPAGFRPSESIYVTGINNSFTGAVLAVLKEGGIVVKANVDATWLNFDNISFKI*	mmseqs_cdd	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0059	cloud	indirect	.	.	.	GCA_000344275.1_01596
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	100652	101257	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	39434	40039	GCA_000344275_1_8_132	GCA_000344275_1_8_132	+	120863	.	pfam07104	Protein of unknown function (DUF1366). This family consists of several hypothetical Streptococcus thermophilus bacteriophage proteins of around 130 residues in length. One of the sequences in this family, from phage Sfi11 is known as Gp149. The function of this family is unknown.	MKLEYGTKSQEFDVSGTASATKVVLTNSDGAIVPILLPADKISLSNTELFELALEALYQENFPNRAENEKFNKVNEQIQKNQESMTRVEQAATDNKENLDTVSAITEVLIALAISQNGGMPTHAYNKVAGFIKSLVKSTRYVNGDIIAMPYPFDTNPKWPKGTKTIFKFQMQATEGYTWKEQSLSDMLQQGVLTVVMPRID*	mmseqs_cdd	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0060	cloud	indirect	.	.	.	GCA_008726875.1_00313
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	101267	101548	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	40049	40330	GCA_000344275_1_8_133	GCA_000344275_1_8_133	+	120863	.	PFAM:PF04531.12	holin	MPGYERLIVQIFLSLIPVIGLYFSMKDKATKQENRLTILEKDIENLHEFKTSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKSLIQNKQQ*	phrogs_hmm	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0061	cloud	indirect	.	.	.	GCA_026783105.1_02177
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	101564	101794	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	40346	40576	GCA_000344275_1_8_134	GCA_000344275_1_8_134	+	120863	.	PFAM:PF04531.12	Bacteriophage-holin	MINWKLRLQNKTTLIALLGAIFLMAQQFGLEIPKNIQDGVNTFVYILVLIGVVNDPTTSGISDSKRALEYYEPSED*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0062	cloud	indirect	.	.	.	GCA_017821195.2_00616
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	101804	102868	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	40586	41650	GCA_000344275_1_8_135	GCA_000344275_1_8_135	+	120863	.	CDD:cd06417	GH25_LysA-like-endolysin	MKKNDLFIDVSSHNGYDITGILEDMGTQNTIIKISESTNYLNPCLSAQVEQSNPVGFYHFAWFGDDIEEAEREARYLLDNVPQKVKYLCLDYEDHASGDKQANTDACIRFMEILKENGYEPIYYSYKPFTLNNIYYEQILAQFPNSLWIAGYGLNNGQADFEYFPSMDGIRWWQYSSNPYDKNIVLLDDEEAKPKWKKNDTGWWYEYHDGSYPKEEWEKIDGTWYYFNERGYSIASRWLKDDGKWYYLKENGAMAIGWVFVNGKWYYLDASGAMVTGWVFVNGKWYYLDASGAMVTGWVQYKDKLYHLKEENGEMSSKELVKVEGGWYYVNEDGSRSDKPALDVLPDGLIVTTK*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0063	cloud	indirect	.	.	.	GCA_028767065.1_01649
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	103001	103729	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	41783	42511	GCA_000344275_1_8_136	GCA_000344275_1_8_136	-	120863	.	PF12073.8	Protein of unknown function (DUF3553)	MRKQIEKVLKSKKSTSAIAKGADLPWTTVSDLRSGKTNLDKMSLLTAEKLQKYAEELEMENAKQLLKEIKNNDVSYAIVNEDGAVYCNLGTSNIMDIYGLDGEDGHFYGVYGDAVGGQLDSRNVPDDVILKAIKLMLGLGEPVKRSELSMGSDFKQTFVDGYFEAVELLKQSGLIQPQEENEKVKEWIESHKDVVGSTVKHPLFGTGKVVKIEDNAITIDFEDAGSKSLALEAVVSNNLLEF*	hhsuite_tools	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0064	cloud	indirect	.	.	.	GCA_013488045.1_01891
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	103671	103796	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	42453	42578	GCA_000344275_1_8_137	GCA_000344275_1_8_137	-	120863	.	.	hypothetical protein	MEILIINILIVLLSYFYLRGQKDEKANRKSIKKQKEHKRNR*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0065	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	103865	104011	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	42647	42793	GCA_000344275_1_8_138	GCA_000344275_1_8_138	-	120863	.	.	hypothetical protein	MDKDDWLRLVEKLIDNGPAYITALTGAYATYHIWSKEKKRKPRPRKFK*	.	hypothetical_protein	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0066	cloud	indirect	.	.	.	GCA_023109315.1_01997
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	104298	105269	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	43080	44051	GCA_000344275_1_8_139	GCA_000344275_1_8_139	+	120863	.	PDB:1SXJ_A	Clamp-Loader	MGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHDDLTEIVERTADIFEMEITHEAAAELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDVITDKALIMLDVDREGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAKAYEHLGYEYSEK*	common_virus_hmm	common_virus	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0067	persistent	indirect	.	.	.	GCA_000092265.1_00427
GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote	cenote	CDS	105250	105834	GCA_000344275.1	AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275.1_AORU01000008.1	GCA_000344275.1|AORU01000008.1	GCA_000344275_1_8	GCA_000344275_1_8@C3	44032	44616	GCA_000344275_1_8_140	GCA_000344275_1_8_140	+	120863	.	2LA3_A	Uncharacterized protein	MNTVKNKQDILEVFRKNPDMMTILTIIRDLGLKDSWLAAGSVRNFIWNLLSDKSPFDRETDVDVIFFDPDVSYEETVSLENKLREDFPQYQWELKNQVYMHLHSPHTAPYTSSRDAMSKYPERCTAVGLRLHADATLELFAPYGLEDIFNFHVSPTPHFLENEDRMELYQERLSKKNWQEKWENLTFSKNLRKV*	hhsuite_tools	nonviral_gene	C3	44616	61219	105835	GCA_000344275.1|AORU01000008.1@region_61220_105835@tool_cenote_CDS_0068	cloud	indirect	.	.	.	GCA_000157355.2_00746
GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote	cenote	tRNA	47456	47546	GCA_000344275.1	AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275.1_AORU01000007.1	GCA_000344275.1|AORU01000007.1	GCA_000344275_1_7	GCA_000344275_1_7@C4	15036	15126	tRNA-Ser	tRNA-Ser	+	123291	.	tRNAscan-SE score: 62.6	Ser		tRNAscan-SE	.	C4	62269	32421	94690	GCA_000344275.1|AORU01000007.1@region_32422_94690@tool_cenote_tRNA_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits