core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	1	74	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	1	75	GCA_000372365_1_19_1	GCA_000372365_1_19_1	-	33027	.	.	hypothetical protein	MTTRVRRLDKNHDWTFGQGFSNYAT	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0001	shell	ambiguous	low	3	0.041	GCA_000372365.1_01959
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	71	715	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	72	716	GCA_000372365_1_19_2	GCA_000372365_1_19_2	-	33027	.	PDB:4RU3_A	phage-baseplate	MSYDQSLATPETATDQQIQQDRLNLHTALPAKVVSFDPAKQTVTLAVQIKMQLADGSGADIPPLVDVPVSFPRGGGFAVTFPLQAGDEGIAIFSERCIDGWWHSGGASLPLDFRLHDLSDAMFIPGVCSVPKAINGFFTGGLSMQTLDGGTYIRIVNGSIKIKGNIEHDGNTKQKGELHSTGEIISDTDVKAAGISGKSHTHRGDSGGTTGTPQ*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0002	shell	direct	high	644	0.998	GCA_000372365.1_01959
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	712	1566	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	713	1567	GCA_000372365_1_19_3	GCA_000372365_1_19_3	-	33027	.	PDB:1WRU_A	Tail-protein	MKQFGRRWKLDISNDQETLSIEQLRVAFEIDKTINEKPNPAKIQVWNLNRDHLNQLLSGAFKKVALSVGYGELRQIYSGDITKARVLRHGLDFVLTLECADGHQAYTKSRATTTLKAGATDEQIVQELQKTMPKVRTGAIDIPNQRKLPRGRVLNGNSRDILTKIARNNGANWSIQDGSLVFLPKDKVLSDDAVLLSQETGMINAPEQTDDGLELTCLLNPALQIGGLVQVESILEYFNGEYKIVKLAHSGDGIGGDWKSKLTVIDGKFKKVEKPKKDSKKDKK*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0003	shell	direct	high	854	0.999	GCA_000372365.1_01960
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	1853	2167	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	1854	2168	GCA_000372365_1_19_4	GCA_000372365_1_19_4	-	33027	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MIMQQIPVTQSPHQEQTFEFNGTKIRLTLRFNSVGRFWAMDVFQPVNQKQICTGQALACGVPLLVRSTQPYFFFLEDESGAELDPMEISDLGTRCFLYIGEKSS*	hhsuite_tools	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0004	shell	direct	high	314	0.997	GCA_000372365.1_01961
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	2178	2945	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	2179	2946	GCA_000372365_1_19_5	GCA_000372365_1_19_5	-	33027	.	PFAM:PF06995.10	tail-fiber-protein	MFNFAQVSNRSIGTIKFDVVTIEDHQSDLSITENPIESGAEIADHAVIQPKQVTINGIMVDQDHGAFGLNAGYIGNIRGGIDFLNNLPLPRKVVTQTVQTIAKVARIVTIAASPGLNATGQARKLAPWLPDFSVMHLLGNSLGDSRVQKCYADLVACQKSGETIEIQTGIHLYKDMLIQSVAVSQAQDGSATFTITAREIFVVNTATTKSGKTTTAGNKKSGRAGSQSAAKTQQGNTQPVAKEPKKKSALLNIFS*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0005	shell	direct	high	767	0.999	GCA_000372365.1_01962
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	2949	5057	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	2950	5058	GCA_000372365_1_19_6	GCA_000372365_1_19_6	-	33027	.	UniProt:tr|A0A0A0YSN4_9CAUD	Tail-length-tape-measure-protein-	MLLNELLIKIGFDADSQAMQQFEQLLNTLEQGANGAAEQLGDFAKAIEDVAKEAVEQAKEMPEFSEFFKSLDDLQEKTKDLSQDEALDAWVQKILESDELLSGFGEDFTTNAQELEQGLVSLGLSSEDVEKVIVKLKDAIEKKQKTTEHDTKSTQENTEAQKDNAQSAGNLADKMIALWATKYGADGLIQKFELLGISISKTTLKFVAFGAAFYAATIGVKNFVDNNLDALNEIKQLSAVTGEAADQIYKLGKVAEVNGSSSQAVQASIEGLSRTIGEAAAGIGRGAKYFEQYGLSAKKANGDVKTSSEILGEISDKMKKMGEQEQIAMLAKLGIDGSMIQLLRLGNDELREQIELADKLTLGVGNAENAKTAAAFKDNMTQLTQVFTAMGEYLSLRIAPAISRIIERFTKWFSENNDLIKAILNGFGRVFSFLFELAGAIDNVVSNTIGWRTVIYTLGAALLWLSRRMILAFATNPITLVLAAISAVFLLVDDFIGYLEGNETALGEFWKPFKSALLWVKTTWQNFIDNFTVDPIGSTLSLVTNMIELPFKLGLALVVGLWNLFTGQQLDLDVIEKGFAKVTDWIKKPFQSAFDWVKGYYDEYIGPIIDTVKDWFGSSGTGKVSENTKAYDAMMFDPNYYATAPQVAAAGLGQGTSNADNSIKNSNNKITITQNIQGADNPKIVADQSARAISNQLSPIVG*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0006	shell	direct	high	2108	1.0	GCA_000372365.1_01963
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	5208	5627	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	5209	5628	GCA_000372365_1_19_7	GCA_000372365_1_19_7	-	33027	.	pfam10876	Phage tail assemb.y chaperone protein, TAC. This is a family of putative phage tail assembly chaperone proteins largely from Haemophilus and Xylella species.	MEQSKQFTLEDITYNMTPANATASWAALKNALKLVQHVDLSNIGKEKGNNVGANMLTAILANLGDPSIKALEDIVLKHTSCEQDGKQYRLSERFDAHFNQHRGHLLPVLKEGLVYQLADFFIGGGGLLSSMLANLNQTQ*	mmseqs_cdd	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0007	shell	direct	high	419	0.998	GCA_000372365.1_01964
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	5627	6058	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	5628	6059	GCA_000372365_1_19_8	GCA_000372365_1_19_8	-	33027	.	PFAM:PF11681.7	virion-structural-protein	MAVFDQKQVVVLLDGKEISDWADGADVINATNQVDAGQMVIGANGTGVFIANPDQSGKLMLKIKQHSEDNAYLSKLFNQQKTSIRTFLPITLAIRDLINDDVVTGTKGYFTTPAPYMRGNGHNATTWTIVFEKMTMNLEKGVQ*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0008	shell	direct	high	431	0.998	GCA_000372365.1_01965
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	6108	7616	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	6109	7617	GCA_000372365_1_19_9	GCA_000372365_1_19_9	-	33027	.	PDB:5LI4_E	tail-sheath	MALSISHIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFGTNSETAKAAQPFFAQSPRAKQLIVARWQKSASTIEATKNTLSGATLSDDLERFKSVVNGRFSLTIGGDVKKVDGLSFARLADFNAVATKIQEKLTTLSVAVSIAYDETGNRFIVSANVAGEDKKTEIDYAIDEGGEGEYIGALLKLENGQASRKVGKNSVSLKKETLGEALFNVAEVNNTWYGFTVAAQLTDSEVEAAAKYAQANTKLFGANVIRAEQIEWSADNIYKKLYDAGLDHTLAMFDKNDMYPVSSALARLLSTNFAANNSTLTLKFKQQPTITADEITATEFAKAKRLGINVYTYFDDVAMIAEGTVIGGKFADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAILIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGDYLDKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVIVNYNR*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0009	shell	direct	high	1508	0.999	GCA_000372365.1_01966
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	7621	8076	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	7622	8077	GCA_000372365_1_19_10	GCA_000372365_1_19_10	-	33027	.	PFAM:PF11367.7	tail-terminator	MIQQALQLPDGVVIGGWLPENPLSAFITVDVLMSSETGIARRDFDGKRERITMSMQNTVSFSCFGTNAMAQCYKLKAILQSSVILQALKTMNVGIVSFSDVRNLTATIGSDYEERGQFDAVFSHHHIVDTPLDPIKRVEQRTNHLTQQIGE*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0010	shell	direct	moderate	300	0.658	GCA_000372365.1_01967
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	8048	8419	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	8049	8420	GCA_000372365_1_19_11	GCA_000372365_1_19_11	-	33027	.	PFAM:PF10665.8	Minor-capsid-protein	MSLINQSGRFLNSRFRQQITVQKQSGSHSASGFDVRYEKQQITAIVIPTSPNDVLLLPEGERYLPSIKVYTQQQLNIGDLVDYRGQTYKIKTAANWGDYGYYNNIGVRHSQTAKVDSTGFTVT*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0011	shell	direct	high	371	0.997	GCA_000372365.1_01968
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	8416	8862	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	8417	8863	GCA_000372365_1_19_12	GCA_000372365_1_19_12	-	33027	.	PFAM:PF05069.12	Virion-morphogenesis-family	MAVTVTANFSAAKQLIEQMKSLKEKAVYVGFPAEFDEKVKGSENFNLASLAAVLEFGNEHIPARPFLRQTLEENQEKYTALFIQWFDQGVPAAQIYERLSVMAQGDVQMNIVKGEWVANAKSTIRRKKSSKPLIDTGKMRQSVRGIVK*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0012	shell	direct	high	446	0.998	GCA_000372365.1_01969
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	8863	9222	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	8864	9223	GCA_000372365_1_19_13	GCA_000372365_1_19_13	-	33027	.	PFAM:PF13262.5	head-to-tail-adaptor	MPLTEDFLLRYTEFGKTDAKRIGLFLSDAQAEVSKVQWGKLYDRGVMALTAHLLKLSADAEISGGAANRNLASESAGELSVSYTAPISANGSDDFYQLTAYGQEYLRLRRLIGVGVMVA*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0013	shell	direct	high	359	0.997	GCA_000372365.1_01970
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	9233	10147	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	9234	10148	GCA_000372365_1_19_14	GCA_000372365_1_19_14	-	33027	.	PDB:5WK1_D	Major-Capsid-protein	MSLLAYVKNGLTAVSKDIAETKYPEIVFPQFVYVDQQTAVGITEKLHYGADEHGSLDDGLITVGTSTLDQVEVGFTPTRSYIVPWAKSVTWTKPELEQGKLLGLALNTAKIMALNKNAQQTLQKVAFLGHAKDSRLTGLLNNKSVEVYAIKGAAQNTKVQAMDFDKAVAFFKEIFLKGMEKTKRIEAPNTFAIDSLDLAHLALVQRANTDTTALEFLTKHLSAAAGRQVAIKALPSNYGTRVTDGKTRAMVYVNSKEHVIFDVPMSPTVLDAQPKGLLAFESGLRMAFGGVTFMEPDSALYVDY*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0014	shell	direct	high	914	0.999	GCA_000372365.1_01971
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	10159	10608	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	10160	10609	GCA_000372365_1_19_15	GCA_000372365_1_19_15	-	33027	.	.	hypothetical protein	MSYAYEQAPARAGELGKGNLASAKTSAEMVSGGALKAGLFVALNAAGGVKALAAKTDVIAGVVLASRIQDEWKEGELVDVMHIAPADAIWVIVADGETVARCDKVYAIAVENGNKKSGTIQGKADATNAIATDYNVIDVKGQLALITKL*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0015	shell	direct	high	449	0.998	GCA_000372365.1_01972
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	10622	11734	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	10623	11735	GCA_000372365_1_19_16	GCA_000372365_1_19_16	-	33027	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTAQAKTQRTITKDGFLVVPATISKVGVFDYLATELGLEEEGIKKVARTEKSLFGDETIKSFENATLTIGHPEDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDENAIKTVQEQGVEQLSCGYDCDIKLSTVQDADFEMSPMIGNHVAIVAKGRCGGGVKLADEDKTIMGKTAKFLDAFLGAFGIKLSDEQKKQIEDEDEEKKGKDGEGKPEGEKKPTEPKNDESDPKKEKEDNVDKEEYEKKLAAKDAEIQQLKDAQAKQEADAKKAALLADAQTVFKDVKFADNATVREIQESAVVAQGIFTKDEAAKLSDAEISGAYQTAKAVVAKLADERKSLGSILLGDAAPNKAAPTIDFNKNYNS*	phrogs_hmm	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0016	shell	direct	high	1112	0.999	GCA_000372365.1_01973
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	12151	12369	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	12152	12370	GCA_000372365_1_19_17	GCA_000372365_1_19_17	-	33027	.	.	hypothetical protein	MSFQYYLANIGENRQKLIRGNPSDLLSFSVFEPKKLEWDSSRGISWAERLLESGFSDFKVISESDAIRFMRN*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0017	shell	direct	high	218	0.995	GCA_000372365.1_01974
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	12366	14588	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	12367	14589	GCA_000372365_1_19_18	GCA_000372365_1_19_18	-	33027	.	PFAM:PF06152.10	minor-capsid-protein	MDDAEGFKAISAKALLAYLEKYEKTDRTSQAENIAQGFVSRGDAQNQAEVSTNLKNQTGVDLAGYLRNSPNIAEKVNALTIDNVQLITNISSQYLDKVKSAVTRAMVSGSLNKDLAAQIKAIGQKTEKRAAFIARDQSSKLNAALTQARHEDLGVKKYMWSTAGDERVRDSHEELDGKVFSYDKPPEVGNPGHDFNCFPGQSELKGLPRPEKLYRRWYSGKLTELVTDNGTVLLATPNHPILTSNGIKSIDSVNVGDYLACEIKQTFDTVKLNGKNLIPTIEQVFNSLLLNGVRTSISSSKSGKFHGDFSDSEIEIISIDSFLIDVLNALFIKKLPELGFTNADMVICKALFSTDSHFDLLKCASGSTGSSFMSRFNLLCSLLVAHLTPLELFCLGLGANIGIIGKQIPANNISRDVEMFSNHIFACAALIHGKDFINWQRDRIMSLVAPNFGHRYTDSFETLSKRLLVTTNNSANFGNAQSLGIEFRRVVNKVVTQASCHIYNLQTVSGYYNINSVFVSNCRCVAIPVFDEAQSKAKAQETLSEPVKENLTLSIDKLVEKSKKIEQTITADINNITIKAGGKLVGLENRLKTAPSIKRKIEAEVADGFSKSLSLNKIGDAIRYTTVFKEGDFVTRYKAMQYLLAIKGYKTIIVKNTWKNDSAYTGVNTFIQNEDGDVFEMQYHTQQSFDLKNGLLHKIYKQFRNPKTPFHEKEKLLLEMRKLSSKIKVPKGIELIEDKK*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0018	shell	direct	high	2222	1.0	GCA_000372365.1_01975
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	14689	16002	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	14690	16003	GCA_000372365_1_19_19	GCA_000372365_1_19_19	-	33027	.	PDB:8HDS_J	Portal-Protein	MKFFDGIKSLALKLGSKQEQTYYSPSLSLTDDLVQLEALWRDNWIANKVCIKRPEDMVRNWREIYSNDLNSKQLDLFTKFERSLKLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDVLSPNFGRYSEYSILGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKIDIFKIAGLSDKIAAGMENEVASVISAVQEIKSATNSLLLDAENEYDRKELTFTGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGLPADWWFEFVPLTTVKQEQQINMLNTFATAANTLIQNGVLNEYQIANELRESGLFANISAEHIEELKNADEFAGNFEEPEKMEGAQVQNSEDQ*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0019	shell	direct	high	1313	0.999	GCA_000372365.1_01976
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	16004	17467	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	16005	17468	GCA_000372365_1_19_20	GCA_000372365_1_19_20	-	33027	.	PDB:8DGC_F	Large-Terminase	MNLSSLKNYSKKEILNKIRIEKAKKSLMHFTTQTKPDFITGFFNILIAQELQKFYQDVVDGKQPRLMIYAPPRSGKSELFSRRFPAWVFGQNPELQIIACSYSADLASRMNLDVQRIIDDPIYHSIFPNTALNIKNIATISGKPLRNSEIFEIVGHLGAYRSAGVGGGITGMGADIAIIDDPVKDAKEANSQTVRDSIWDWYTTTLYTRLSPKSGVLLGMTRWHEDDLAGRLIKEAENGGDQWRIVKFPAIAEEDEEFRKEGEPLHPERFDLERLNKIRQAVGSQAWNALYQQRPSNKGGGIIKGSWFGRYKVPPIIKVKAIYADTAQKTKQHNDYSVFIVAGKGADGKAYILDLIRGKWEAPELEQTLKDVWAKHKAKKETGILTRANVEDKASGTSLIQTIRRNNQIPITPIQVDADKYTRVLGVQGYIESGYVMLPESAPWIADFINECEAFTATDSHAHDDQVDALVMAISDILGKPKSLLDL*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0020	shell	direct	high	1463	0.999	GCA_000372365.1_01977
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	17412	17972	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	17413	17973	GCA_000372365_1_19_21	GCA_000372365_1_19_21	-	33027	.	PFAM:PF03592.15	Terminase-small-subunit	MSKKDEVKSTSRRGESKLTNKQKQFIEEYLIDLNATQAAIRSGYSKDTAKEIGYENLTKPYIQQAIAEAQNKRSERTQIKQDDVIRMLLENIEIASGKKAVIKTEIRKSEDGQLVGDDIAQFVYESSSVNRSLELLGKHFGMFSEKVEVSGDLHIEQRNELNLSGLDINELEQLEKLLEKGNPEQD*	hallmark_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0021	shell	direct	high	560	0.998	GCA_000372365.1_01978
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	18129	18395	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	18130	18396	GCA_000372365_1_19_22	GCA_000372365_1_19_22	-	33027	.	.	hypothetical protein	MKTEKIEMANNKTHGEKLVGIDFNVGNRGDVHDCKRRFAEAINHLETHRAEAFEHGTLTADKEMLLDEAQKRIIDAQMWAVKAITWGL*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0022	shell	direct	high	266	0.996	GCA_000372365.1_01979
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	18592	18924	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	18593	18925	GCA_000372365_1_19_23	GCA_000372365_1_19_23	-	33027	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MLFISRYITASLGFIILGLGAWSWSQSNTITNLRAENKTQAQTIKNQEEANKALNIALQQERQAVIEQQQKNQEIERAASENAETVKTIIKTQPCYRTKLPQSALERLYK*	mmseqs_cdd	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0023	shell	direct	high	332	0.997	GCA_000372365.1_01980
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	18927	19508	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	18928	19509	GCA_000372365_1_19_24	GCA_000372365_1_19_24	-	33027	.	PDB:3WH1_A	Chitinase-	MFITQAKFKLVFPQAVKGIYPTIAAYAEEYGLDTKQKEAMFLAQCGHETAGFTRFAENLNYSADGLLRVFPKYFNKHTAQQYARKPEAIANRVYANRMNNGDEASGDGWKYRGRGIIQVTGKKNYQAFESWVGERVTPESLSSDMDLCVLAGFWYWSVNGLDKISDIVAVTKLINGGTNGLSDRKALYVNLLG*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0024	shell	direct	high	581	0.998	GCA_000372365.1_01981
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	19577	19828	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	19578	19829	GCA_000372365_1_19_25	GCA_000372365_1_19_25	-	33027	.	.	hypothetical protein	MRVSIPDELLRPCPKPAFRGDSASDIAVYAVKVTDQLKICNQRINQIKSFVRQNDYESPLKDGHSGEQGGGRETESIGVGVDG*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0025	.	unmatched_CDS	none	0	0	.
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	19851	20219	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	19852	20220	GCA_000372365_1_19_26	GCA_000372365_1_19_26	-	33027	.	PFAM:PF10828.7	Rz-like-spanin	MSQAQALRISSILDNVFTFLLLIGCLGLFVQIYKQNDNLSALQNKYDQMVVLADQRMKRIDALQANLSDRNDKIELLMQAQEEERKANGERIDAIRKIIKENRCVRNSGISGDVINRLLKSE*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0026	shell	direct	high	368	0.997	GCA_000372365.1_01982
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	20216	20662	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	20217	20663	GCA_000372365_1_19_27	GCA_000372365_1_19_27	-	33027	.	pfam16083	LydA holin phage, holin superfamily III. Phage_holin_3_3 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as those of the bacteriophages of these organisms. Their primary function appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases. LydA and lydB are encoded on the dar operon. The phenotype of a rapid lysis in the absence of active LydB suggests that this protein might be an antagonist of the holin LydA.	MQQNGQLNGTIDVVTSVIAFLFSGLGGIVKCITTAEAEGDKVRIDMVASSFFIGAFSGMVVAFFLMSQKIDTLMIISIAGAFGYFGVPALWGLLRVFFRQIGGTVDDLKSGYELKKTEKQELADEKDEDVTEYDELPPKRKTSRRKSK*	mmseqs_cdd	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0027	shell	direct	moderate	273	0.611	GCA_000372365.1_01983
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	20826	21722	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	20827	21723	GCA_000372365_1_19_28	GCA_000372365_1_19_28	-	33027	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MSNQSQLSTYNFESHTIRTLAINNEPWFIAKDVCDAIGIDNNRKALLALDEDEKGVTLSNTLGGKQEMNIISESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPAIRKTGKYEAKTTVDDRTGLRNAVNMLVSKKGLIYSEAYHLIHQRFNVESIEDLTLEQLPQAVEYVHKIILEGELITDVALPEPKPKTYTIEMTENDITVLLWLWFISVRVIGSLKMLVKPLKLLQAPIAPEVVSQANEYPFTVEHARRILLKMSKDLEADPWRDDNLSRVLPKIRNFNESDLAYPGNRHEI*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0028	cloud	direct	high	896	0.999	GCA_000372365.1_01984
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	22012	22383	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	22013	22384	GCA_000372365_1_19_29	GCA_000372365_1_19_29	-	33027	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MQYSVEKILVRWGNCWGRDRIGTEYPSVTPSIPVLPSAPRKAWLKHLSDDECLKIEGAIMALHRVDLAAYQVTMALYVQQLGEKDITRALAVSPAKMYRLRNRGISFLQGAFSMLKIKYHYIG*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0029	shell	direct	high	371	0.997	GCA_000372365.1_01986
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	22383	22952	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	22384	22953	GCA_000372365_1_19_30	GCA_000372365_1_19_30	-	33027	.	PFAM:PF05766.11	NinG-recombination-protein	MRVKSLKPKKCKSCGVEFIPTNSLQKVCSPKCAIELARKNAQEAHSNAEKKKLKERKAKLKDSDRGHWLRLLQREVNKFIRLRDKGKPCIACGAPWKPSFQASHFIPQGRSSFLRFHEDNIHSGCIRCNLFVGGGNIHGYRPRLVDKIGSEKVEWLEENQHQTKKWEIAELKEMIKLYRAKIKALEGAN*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0030	cloud	direct	high	569	0.998	GCA_000372365.1_01987
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	23142	23321	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	23143	23322	GCA_000372365_1_19_31	GCA_000372365_1_19_31	-	33027	.	COG0050	Translation elongation factor EF-Tu, a GTPase [Translation, ribosomal structure and biogenesis]. 	MSKEKFERTKPVLNVGIIGHVDHGKTELAKALLRHRENWRKWRQSGNANLINGVRNEPD*	mmseqs_cdd	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0031	shell	direct	high	179	0.994	GCA_000372365.1_01988
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	23321	23548	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	23322	23549	GCA_000372365_1_19_32	GCA_000372365_1_19_32	-	33027	.	.	hypothetical protein	MKFLTIFILIVVSCFCIANVTDGATGVFSLVLCFVSFIFGVNIHADIVRDKAKNGELLEIGKKYYAIKYAKDKVE*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0032	shell	direct	high	227	0.996	GCA_000372365.1_01989
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	23545	23970	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	23546	23971	GCA_000372365_1_19_33	GCA_000372365_1_19_33	-	33027	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPMTRNLEQNAKLHAMLSDISNQCEFGGEKRDINTWKMIFCSAHRIATGDKAEMAIGLEGEVINLRESTAQMSVKHMASLIEYVTAWGVANGVKFNDRWGFYGR*	mmseqs_cdd	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0033	shell	direct	high	425	0.998	GCA_000372365.1_01990
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	24049	24543	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	24050	24544	GCA_000372365_1_19_34	GCA_000372365_1_19_34	-	33027	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MADFDKDTYPTSFSLFNPIHAEFGFTIDGAALPHNAKLERYVTPEMDYLTYPIQNERIFINPPFSDPLSFIKRSVELFENHNCLVAMLLPVDISTKWFALVAEKATEIRFIIGGRVKFLNPATGKYTDVCRGNMFAIFNPAHKGMSQVIRNVHINTFKNLEWRQ*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0034	shell	direct	high	494	0.998	GCA_000372365.1_01991
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	24546	26003	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	24547	26004	GCA_000372365_1_19_35	GCA_000372365_1_19_35	-	33027	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MENLKIVPYNLGAEQCVLGALMFGSLSKDALVVLDFVKPESFYRFEHQHIFAEIQALAKNNQPIDLMTVESRLSTKGVLEQIGGFAYLAELANNTPSAANIRAYAEIVREDAIKRFTIAKLQDCEALILAQNDLKAADRIEAISCVMSEISDYSRTGKSKGLRSGRDVGTDWLDKYQLRLEQPESVRGILTGIKALDEVIGLKGLVKQSLVALGARPKCGKTAFYSLMAENCILNEKKPVLLFSLEMSAEQIFERMLVKRANINANSLYDTGLNDDEFYLKYHLHKDTVMTRVTQSVGELVNDDLLYVDDTPNVSMSHIRSECRRIKRERGDIGFIGIDYLTLMKAEKAERNDLAYGQVTKELKNLAREMDCVVLLLTQLNRGLESRSDKRPMPSDSRDTGQIEQECDYWLGLYKESVYNENADPSLTEIIVRLNRHGGTGKAYCDQKFGAMFECDQLDAERRSQIGKKETKQETTRFSKGNKGF*	rep_hall_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0035	shell	direct	high	1457	0.999	GCA_000372365.1_01992
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	26003	26803	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	26004	26804	GCA_000372365_1_19_36	GCA_000372365_1_19_36	-	33027	.	PFAM:PF06970.10	replication-initiation-O-like	MKPSELLRNTGRSIAYRPNLARLFGGVVAEILFEQIFYWQDKADPVLGVYKTQEDLEFETGLSRKEQETARKLLREKGVLIETHKRLEHRLYYKIDLDALDALLATLGNETKEHSRMPESDIREEPKVAFVNTLDYNTRLHTNTPLTPLTPLTPQGEDSPNGKSKNNHLAEKIDYQAIADAWNQVNENSGGQLPFVEKINNDRKRDIKKFLGELSKPTIECVRNYFEAFFAAVKPHHLGENDRGWRANFDFAIKPRQVLRVREGAL*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0036	shell	direct	high	800	0.999	GCA_000372365.1_01993
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	26800	26958	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	26801	26959	GCA_000372365_1_19_37	GCA_000372365_1_19_37	-	33027	.	.	hypothetical protein	MSNLFDPEYVKTLSELERWEKYEEVKRNLRNSNATVEECDRVTAKAIEELEL*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0037	shell	direct	high	158	0.994	GCA_000372365.1_01994
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	26958	27677	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	26959	27678	GCA_000372365_1_19_38	GCA_000372365_1_19_38	-	33027	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANLIQISNSKINNSEVKTVNARELHSFLEVSTRFSDWIQRRISEYEFVENQDFVVLLKNEKNPVGGRPSREIHISIDMAKELSMVERNEKGKQARQYFIEMEKVAKSTDPMVLLNDPVYLRGALATYSERVIELTPKAEAFDRLATATEGAMNLTNAAKHLQMQPRAFNQFLFAHGWIYKRTVGSAWIAYQDKLQRGYLEHKAHPVTQPDGTERIYPQVLVTAKGLAKLSTMLNKAVA*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0038	shell	direct	high	719	0.999	GCA_000372365.1_01995
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	27729	28055	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	27730	28056	GCA_000372365_1_19_39	GCA_000372365_1_19_39	-	33027	.	PFAM:PF10078.8	CII-like-regulator	MELIYQQAIAMARNKLTRSAKPLSDRVMNKYWKQKQCEIADEMECSPSTLSRFVSNEDANQAFNFIAANGFDVFDVNSHVAIEKSELELLLLAAKGFDDRLREKYLGK*	phrogs_hmm	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0039	shell	direct	moderate	246	0.752	GCA_000372365.1_01996
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	28046	28234	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	28047	28235	GCA_000372365_1_19_40	GCA_000372365_1_19_40	-	33027	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MLPIEKAYKIVGGISAMARHFNLTPWAVSKWRERVPAERCAKIEELTQGKVKKSELRPDLWN*	mmseqs_cdd	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0040	shell	direct	high	188	0.995	GCA_000372365.1_01997
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	28344	29060	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	28345	29061	GCA_000372365_1_19_41	GCA_000372365_1_19_41	+	33027	.	PDB:2FJR_A	Repressor-protein-CI	MTTLASRLAELMTQQNKSIRDLQDALGVTYEMARRYTLGTATPRDAKIEAMAVYFGVSPAYLKYGASEETEKQGQSTESIKSNVREVGAFDLWDRNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKATLRKQGVQYENAVCVVADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNSEEHPDEIADMQDISVIGKVFWYSVLL*	common_virus_hmm	common_virus	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0041	shell	direct	high	716	0.999	GCA_000372365.1_01998
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	29118	30005	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	29119	30006	GCA_000372365_1_19_42	GCA_000372365_1_19_42	+	33027	.	.	hypothetical protein	MAQKTKTFYMRFYSTECASDKMASKNLTQFLRKYSNGQHTYITPLVEFNDYSYRVKVCSDLNNTISGYFVTYRNELLTKGNMDTGDEEPLHFADNEAIIEKTYFMSYPSPSGSEIVIYQNSRFGRIHDLSSYILNLLRNENLDGGMYFNPIGKDDFDLENILKQKPSYVEYKLAKPRYKYKPDEKEPKWEQSQFALMEDCNAGTFTAKLSTKSAAGLNKSKLKEMVESILDNPHARKCKIKLEDIDEPIDLFSDVLKAQFTVSLAENGTSGESYIFNNIRTLKSSYAKLLEKYIQ*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0042	shell	direct	high	887	0.999	GCA_000372365.1_01999
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	30013	30447	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	30014	30448	GCA_000372365_1_19_43	GCA_000372365_1_19_43	+	33027	.	.	hypothetical protein	MKIEYYKPISGILAITAHTVIWYYDFLERFKKDELRDLMSDLFTSSITLIGFIFAVIAILVSITEHSLIKKMRDNGMYQEILIHLKYLLIGFSFTSVLSYAGSLLSGELLSYTLLITSTVFMYNLLMLTTDMFRRLTLTFINLK*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0043	shell	direct	high	435	1.0	GCA_000372365.1_02000
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	30803	31327	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	30804	31328	GCA_000372365_1_19_44	GCA_000372365_1_19_44	-	33027	.	PF14163.6	Super-infection exclusion protein B	MEEYAKLLNTILTKVVFNHMTMFFVFLFVGFTFIPTELTLYLNAKTPAFFPDWFTLANFGSLVFGFVATMIWILSSNAIKSLINKTRCSIKANSEQAKLLELLPTLSGTEKEILALSCLGEQIWRDDFKTKIAIEKLLELKLISYGWVSNRYEVNPLIRPSLISELDKLANTHQ*	hhsuite_tools	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0044	shell	direct	high	524	0.998	GCA_000372365.1_02001
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	31894	32031	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	31895	32032	GCA_000372365_1_19_45	GCA_000372365_1_19_45	+	33027	.	.	hypothetical protein	MEEKKENSLSERDKGLIKQAVLESAAKNTNLTPSELAESVCSAVM*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0045	cloud	direct	high	137	0.993	GCA_000372365.1_02002
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	32013	32201	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	32014	32202	GCA_000372365_1_19_46	GCA_000372365_1_19_46	+	33027	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MFGSDVSYAALSLTWQGHEFLDKIRNDSVWNKVKSTVQSKSLDLSFDVIKQVATALIGSMLP*	mmseqs_cdd	nonviral_gene	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0046	shell	direct	high	188	0.995	GCA_000372365.1_02003
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	32354	32533	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	32355	32534	GCA_000372365_1_19_47	GCA_000372365_1_19_47	+	33027	.	.	hypothetical protein	MKTFKTPTKQRYLSPQEYLKDAKFNQQCNNIEQVKFIPPQIGKPGFGKFLVKYKMPVLV*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0047	shell	direct	high	179	0.994	GCA_000372365.1_02004
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	CDS	32533	32946	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	32534	32947	GCA_000372365_1_19_48	GCA_000372365_1_19_48	+	33027	.	.	hypothetical protein	MNNDNNLPQQIENKDEFIKEFFAIQQQEVAVKRDELAIRKEETKLNQEVALASIASQEKVELKRGDVFLKTQIGKYWLWGVLGVLFTFIIGIAMYLDKSDIAIRIIEISGAVLLGYFAGINRGKAQILEQQNRTKDE*	.	hypothetical_protein	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_CDS_0048	shell	direct	high	413	0.998	GCA_000372365.1_02005
GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote	cenote	CDS	1	86	GCA_000372365.1	AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365.1_AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365_1_28	GCA_000372365_1_28	1	87	GCA_000372365_1_28_1	GCA_000372365_1_28_1	+	2966	.	.	hypothetical protein	FEPDSRKLTISIDYQDIYGQQQTARYTA*	.	hypothetical_protein	NaN	.	0	2966	GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote	cenote	CDS	117	1259	GCA_000372365.1	AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365.1_AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365_1_28	GCA_000372365_1_28	118	1260	GCA_000372365_1_28_2	GCA_000372365_1_28_2	+	2966	.	PFAM:PF04865.13	Baseplate-J-like-protein	MAKLIQTGIQIERLSDIITRFEEGFLQIYGQNIDLSPDTPDGQMVGLLSQIKMDIEEMAENVYRQLDPDVATGAWLEQRVAYAGLMRRAASYSYLRSVVLTGEPLTQLYAGIVVSDPHKVRWVLNANVQLDSNGSARADFRSEELGAFNLAKNTNLTIETVTLGLNAATTLENAEIGVEEETDQQLRERFFISRTKNAQNSADAIQSKIAALPDVKQVKVLENNTKQRDKNGVEPHSLNVIVDGGEDNQIAQVIYENKGAGVGLQGGTETTLTINNERRTLRFDRVVQVDVQVSMRCVRYEDFTEVDKEEIKRLLSIQKFEIGQNLSLSRLYSPINQVGGFWVKELKIGRKGQALKAENVAVQPRELARILASDITIEVE*	hallmark_hmm	common_virus	NaN	.	0	2966	GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote_CDS_0002	shell	direct	high	1142	0.999	GCA_000372365.1_02123
GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote	cenote	CDS	1259	1840	GCA_000372365.1	AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365.1_AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365_1_28	GCA_000372365_1_28	1260	1841	GCA_000372365_1_28_3	GCA_000372365_1_28_3	+	2966	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MAYADLLIWQYRNKPKAVATIKLIESIIAQGFVDLYQLQDVLNIETATGHQLDLVGKHVGQGRIINGYQMRKFFGFRGSTQALGFSKLRRGGGQWYRRRDPLADSVRLSDEDYRFMIKCRILKNYQTGTLPNMIEACRFIFGDGCRVIDNYDMTVSVSVSVSNQNISDFKKFAINNLDILPRQAGVQYIFKLV*	mmseqs_cdd	common_virus	NaN	.	0	2966	GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote_CDS_0003	shell	direct	high	581	0.998	GCA_000372365.1_02124
GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote	cenote	CDS	1851	2963	GCA_000372365.1	AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365.1_AQUU01000028.1	GCA_000372365.1|AQUU01000028.1	GCA_000372365_1_28	GCA_000372365_1_28	1852	2964	GCA_000372365_1_28_4	GCA_000372365_1_28_4	+	2966	.	PDB:2FKK_A	Baseplate-protein-	MALVNKPDESIFASSAKQGEVDNFPDLLRGWGITFDQTQGIPPMEWFNFLFKRLDEKHAYLMQRGLPEWSATQDYNKGSCVQFDGLSYRALKANQNNQPNEANSQYWVRWGFTLTEIARATLTQYGLTQLYTGYDSQREDLALTPKTAFLLKQLIDSNTRTLGDVIPNSKKSDEVNSNSSDTVATSKAVKTAYDKGVEAKTAADNAQHTANSAENIANNANDNANRRVSKSGDTMTGQLSVPNIITKHHGTGGYHNQFDMQAPFFVDAVGYTRESTFHPFIKGKVRTKGDWGTVFSIGYTTKQTGYYENGEFGRGVINLNEDNGAFKNWEFEHNGTFRSAGDVVTSTGRSLNSTIYKEGNPHDIALSWLTD	hallmark_hmm	common_virus	NaN	.	0	2966	GCA_000372365.1|AQUU01000028.1@region_1_2966@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote	cenote	tRNA	31699	31789	GCA_000372365.1	AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365.1_AQUU01000019.1	GCA_000372365.1|AQUU01000019.1	GCA_000372365_1_19	GCA_000372365_1_19@C0	31700	31790	tRNA-Leu	tRNA-Leu	+	33027	.	tRNAscan-SE score: 36.8	Leu	NA	tRNAscan-SE	.	C0	33028.0	0	33028	GCA_000372365.1|AQUU01000019.1@region_1_33028@tool_cenote_tRNA_0001	.	.	.	.	.	.