core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	199049	200161	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	1	1113	GCA_000373785_1_1_185	GCA_000373785_1_1_185	+	731061	.	PDB:1GH6_A	Large-T-antigen	MADKRDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRANYDQFGHAAFDQGAGGFGGGFSGGFDDFGDIFSSFFGGGGGGQRRNPNGPMKGQDRFMSMRIDFMEAVFGANKSVTLNVDEECTSCHGSGAHSKDDIKTCSRCGGTGQTVTQQRTPFGVFQSQAACPDCGGTGKTIKKRCGECHGKGYNTKRVEVDIKIPAGIVTGQQLRVSGKGERGANGGPNGDLFIEIVVGTHKHFRREGNDIHINIPLSVIDATLGTEIEVPTVHGDVTLTIPAGTQPNTKFRLRDKGVKDLRSGRMGDQYVEVKLEVPTKLSRQQREHLEALKETEVKGDSVFDRFKKAFK*	rep_hall_hmm	common_virus	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0001	persistent	indirect	.	.	.	GCA_000154525.1_01644
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	200233	202788	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	1185	3740	GCA_000373785_1_1_186	GCA_000373785_1_1_186	+	731061	.	PDB:4M4W_K	Replicative-helicase,-DNA-primase	MNYENLTEKAQAALMEAVNYATQMQNNAVSASHLMKAVLNSGDLDLILDETGTNKEALLSAADQALNKLPKVQGAQLTMSQDITNVFAKAQAWSSKQGDTYISLFALFLGILESDASYKTLADFKKIEASILSHRSGRTMDSPQAENQIDALLKYGRDLVKDVRDGKVDPIIGRDEEIRRVIQILSRKTKNNPILIGEPGVGKTAIAEGLAWRIMRGDVPFSLKNKQLIELDMGSLIAGAKYRGEFEERLKAVLEEVEQADGNIILFIDEIHNLVGAGKTEGSMDAANLLKPMLARGELHLIGATTYNEYRQHIEKDAALERRFQRVTVNEPTVEDTISILRGLKDRFESHHGVKILDESIVASAKLSDRYITDRFLPDKAIDLIDEACASIRVEMESMPEELDELTRKIRQLEIEEAALKKETDTKTLERRDEIVEELSNLKETYQDLYARWEKEKAQVDGVKGAKEALERARLDFEKAQNEARYEEAARLQYETIPALEREIQEANETEKSGGMIQEVVDEELIAEIVSRWTQIDVTKLVASEREKLLNLKQELEIYVKGQDKALQTVTDAILRSKAQIQDENRPLGSFMFLGPTGVGKTEVARVLAQQLFDDKNRIIRIDMSEYMEKHSVSRLIGAPPGYVGYEQGGQLTEQVRRHPYSIVLLDEIEKAHPDVFNVLLQILDDGRITDSKGVTVDFKNTIIIMTSNLGSQFAFEPDQTTRDNHYMQAVQAHFKPEFINRIDEIIVFNALTDAVLHDVARKFIDELAVRIGRRNLKLKVTDGAIDRIVAEGSDVTYGARPMKRFIQREIETQIAYLLIEKDVVDDSILEIDATDQGFVIHVLDPHKVLN*	common_virus_hmm	common_virus	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0002	persistent	indirect	.	.	.	GCA_000425005.1_01700
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	202815	203465	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	3767	4417	GCA_000373785_1_1_187	GCA_000373785_1_1_187	-	731061	.	PF06912.11	Protein of unknown function (DUF1275)	MNSLNLKQENSRLAFLFSFISGYIDVLGILAIGGVFLSFMSGNSTRLGIHIVYHEWGEVLKYVLVLSTFVLGSFIGNMVCVGSHLQTIKRILILDILGLSLALILQYTPLEPWSFPVLSFAMGIQNKAQVEVNNATIGKGFMTGVLYGIGEALARRVRNETTWHEVSALLMTWLLFFLGSVVSTMILCVTNASIALLIIIIILFIIYFGFKFYHTN*	hhsuite_tools	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0003	persistent	indirect	.	.	.	GCA_000379145.1_08579
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	203672	204016	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	4624	4968	GCA_000373785_1_1_188	GCA_000373785_1_1_188	+	731061	.	PFAM:PF09390.9	acetyltransferase	MICLGTQEQIEELVYLSIMCETDCSYEHRHAIIKSQLNSEQDLFVIKYDCGFPAGFAHIQKDPYNGHHGRLQTIYVEEAFRGNGYATEMIATCKTLLGDFDDVELSSECSFQVF*	phrogs_hmm	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0004	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	204127	204900	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	5079	5852	GCA_000373785_1_1_189	GCA_000373785_1_1_189	+	731061	.	COG1266	Membrane protease YdiL, CAAX protease family  [Posttranslational modification, protein turnover, chaperones]. 	MTVDYENYEMKYEDIPRAEGIRDVESPMKGKRLFFSLFALLIIANISDAFVGVYMEMQMTQDFNMTAFTPIMIMLITTVILIWANLPLIKEVMVFPKRFTKLQTARKVGFLFLIMILANFIVSPLVAMLIESLGGSSQPINQESLIAMKGIGFPMYFVFAVIAGPIKEELLFRGLIFRKLINKNRFAAYAVSSLLFGLMHLTTEMVTGEWIMMLNLIIYAGMGLFFAYIYEKTNNIKAAMYLHMLWNTMGVLAIFAG*	mmseqs_cdd	nonviral_gene	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0005	persistent	indirect	.	.	.	GCA_000174135.1_00568
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	204937	205506	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	5889	6458	GCA_000373785_1_1_190	GCA_000373785_1_1_190	+	731061	.	.	hypothetical protein	MKVKMLLTKDVVPNDILNQERERFEWVTHLPDDSITVSPEMVLSPLASWDVVRRARTLDFIAAAPLNTWEEVYNLWYAVKFLCQEIHDHQARSLGRRLAQQEDDDFEVLRDEMVKIVYQPSSPSRIKGWFLKAMAHERKQHPDVSIFQDVMEDTSEAGIYFGIQRMEQYTAIHNLFFQLEPYTKQREVK*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0006	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	205499	206227	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	6451	7179	GCA_000373785_1_1_191	GCA_000373785_1_1_191	-	731061	.	.	hypothetical protein	MESTRQALQRRGYLDLTTVTYYANLSDDALLEQLQAENAHDRTAAVHVGARRWNYEPWFVDLLLKQLVHEEALYTRLEICRVLEDGNNDVAAAMIPYLGTIGRNQHQSVPATISRKTSYPLPRDLIARTLGNMNASILYTMIDHLDSLNRQQLSEMIDAYGYLISKHPHLATEAHLKIISYILSEHDGDELIIWKCMQCLSAFPLDNALKLLQTYASKVKHPTTLLEINRSIALISKQREVI*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0007	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	206789	207082	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	7741	8034	GCA_000373785_1_1_192	GCA_000373785_1_1_192	-	731061	.	1YWW_A	structural genomics, YjbJ, PSI, Protein	MTDKGTGDKIVGKAKEVVGEVTGDDKTKAEGLLDQAVGKSKEIASDAKEKTEDIAEELKEKSEDVLDDLKEKSEHIAEDVKKTSKNVVDSIKEKFKK*	hhsuite_tools	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000194925.1_00477
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	207289	207816	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	8241	8768	GCA_000373785_1_1_193	GCA_000373785_1_1_193	+	731061	.	.	hypothetical protein	MYDHAITHLADWYYVQVLEYKKINHKEIKKHIRRTISYSWNMLGDLDINKKLVSKAAYDEFKKLKTLGKDIRDMSWSDQVRSIDNGGLGDVGRKVFHWEHAFTRNDFVTLLLDSESNLTREDIANIVKQHQIIWILKNENEILNKMKRYDGVRYDRSRPDGWRKVYEEAGIEILD*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	207937	208638	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	8889	9590	GCA_000373785_1_1_194	GCA_000373785_1_1_194	-	731061	.	.	hypothetical protein	MKKYTLSFYLNILSVALAAFLFNTQVYFENNKTLYAILASIVYITYAFSLLLPLTSGVIERMTPVIKNANSILILLSSLFMFGGITYISKVLNLYYVVALYSILAIIIMATTIDLVKNNKTVLIKPSVDESENSKKISFVIVPLMIVIFGNAKKIYPYNYLILIIFFIIQAYLIINLNNADVRDRKIDKLWLSKFILLGSLIILIIMVIYDLKGIIPYALATISIYTFSGAST*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0010	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	208641	208889	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	9593	9841	GCA_000373785_1_1_195	GCA_000373785_1_1_195	-	731061	.	.	hypothetical protein	MNLLLSLHHLTIYACEIPFIDDAELMTRSKVIKVYDGFTDFIAGVIKSITGLILRSHDAIAHHFGNNIAQNWNDYNYRGTVK*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0011	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	210128	210739	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	11080	11691	GCA_000373785_1_1_196	GCA_000373785_1_1_196	-	731061	.	.	hypothetical protein	MILNNLKTLEQKMTQEDINRVTFSSFVKGKKFKCIYLRDFEPKRLFFTSLGSDAFVLERDVGDDFTISASIENEVYKQLASYISPTYTEERFIPSAFFSEFNDQLKDVEIIKTTAAEDLSLISKVTSIEESDKIYFKTFYRNSLPNKPSQLNIQKTAFAFGNAFSKVLQLAGISTVWSVTPTDKSVRTDEIALLFREYHENNQ*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_001552975.1_01932
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	213998	214879	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	14950	15831	GCA_000373785_1_1_197	GCA_000373785_1_1_197	+	731061	.	1S2D_B	purine trans deoxyribosylase (E.C.2.4.2.6)	MPNKTEKNKTEKKCFIITPIGGKGTEVQREALGIVDVVIKPVAENCGFEQVKSAVDFHVGQITPNIIKAIYEADLVIANITGQNPNVMYELALSHAFKKPTIHILKENSSVPFDIKDYQYIDFINDISGTEALKEELHKKIEHVMFLDEGNISNPVIDALKTFTVIENENTNIKSDEMITELYRSVLDMRAEINALGSYFNRKSRNMSSKSMELRGMNGKETFLYDNFVRATNNKKYKDFRNIKDKDLYMFFNHALDSGMMVSSQSIEKFSNVIMMDKDLTIELVQELGIAVY*	hhsuite_tools	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0013	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	215290	215604	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	16242	16556	GCA_000373785_1_1_198	GCA_000373785_1_1_198	+	731061	.	PFAM:PF07141.10	Small-Terminase	MLLERWARKISNEQIEANIGIALKTLYAWMNKYPEIREAVERGKEVLVSEIENAFVKRALGFTEEVNRAKLTKDCDVVRYTEEIYYPPDSTSLIFGFKNFDPEH*	hallmark_hmm	common_virus	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_022648595.1_00336
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	215685	216002	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	16637	16954	GCA_000373785_1_1_199	GCA_000373785_1_1_199	+	731061	.	PDB:8DGC_F	Large-Terminase	MQTKIADGERQELAIRHFADYVSYTNRGNYRHAKRTRLICEGLEKLIYQMNQRIVIEMAPRHSKSIAITEAFPSCYLCKHPENVSYWLHKLRVLQMVLLDKAEKI*	hallmark_hmm	common_virus	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_003344065.1_01415
GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote	cenote	CDS	216668	217033	GCA_000373785.1	KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785.1_KB892377.1	GCA_000373785.1|KB892377.1	GCA_000373785_1_1	GCA_000373785_1_1@C9	17620	17985	GCA_000373785_1_1_200	GCA_000373785_1_1_200	+	731061	.	.	hypothetical protein	MVVFFRKRLNSVSKDIMPEDAADELEAYCKRHFNERIMGEIYNHSLYRIFYYDCPPVRKSVYNPITKSNDDLGKSETYSWITEFFECLKRRRKFSLRMGEFSSVSMGYHLKSEPLKKLFRL*	.	hypothetical_protein	C9	17985	199049	217034	GCA_000373785.1|KB892377.1@region_199050_217034@tool_cenote_CDS_0016	cloud	indirect	.	.	.	GCA_018127725.1_00825