core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	20989	21429	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	1	441	GCA_000420605_1_14_17	GCA_000420605_1_14_17	-	47159	.	COG0589	Nucleotide-binding universal stress protein,  UspA family [Signal transduction mechanisms]. 	MSDYNKIVVGTDGSKSSLLAVERAARIAGAFDATLVIGCAYYENKEQASKTLRQDTVTILGDEKAEANLQSAREHAEKFGAKNIETAVRPGTPVQALMDIVKDNNAELLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS*	mmseqs_cdd	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0001	persistent	indirect	.	.	.	GCA_000277715.1_00646
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	21519	21968	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	531	980	GCA_000420605_1_14_18	GCA_000420605_1_14_18	-	47159	.	PFAM:PF00582.25	universal-stress-protein	MLHYDVIAVGTDGSDGAQKAVRTAASMARAYQAKLIIVTAFYTHHGGVFGAHSSETDKLPIVSEESAESYLDAAVKIAAEEGADKVEVIPKSGDPVHALMEVGEEHDVDVFVVGNRGINSLSGRVFGSVSTELMRKVHCDVVVVNTTQQ*	phrogs_hmm	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0002	persistent	indirect	.	.	.	GCA_000833575.1_01505
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	21998	24106	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	1010	3118	GCA_000420605_1_14_19	GCA_000420605_1_14_19	-	47159	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MAFAAEHPVLSESEHRPVSEIERTGGDFKVESEFEPAGDQPTAIAELDRRLDAGESDVVLMGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELRQLLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSALLSRRDVVVVSSVSCIYGLGTPQSYLDRSVLLKVDDEVERDRFLRLLVDIQYERNDVGFTRGTFRVKGDTVDIIPAYEERAVRIEFFGDDVDALYYIHPVTGNVIEQVDELRIFPATHYVAGPERMAKAIQDIKDELAERLEDLENRGKLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHVDGRPAGSAPATLMDYFPEDFLTIIDESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSAMDNRPLTFDEFEKRVGQTVYMSATPGDYELTASGGEFVEQVIRPTGLVDPKVTVKPTKGQIDDLIDQVRERTEKNERVLVTTLTKRMAEDLTDYLMENGIKVRYLHSDIDTLQRVELLRQLRQGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIGRAARNVSGEVIMYADEITESMRNAIDETERRREKQIAYNEEHGIDPQPLRKKIADILDQVYEDQDGDSDKDGTRDGDPAALVERPDVSSMAADEVQALIDDLTKQMGDAARELKFELAGRLRDEIADLKKEKRGLEEAGI*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0003	persistent	indirect	.	.	.	GCA_000805675.1_01616
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	24117	24479	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	3129	3491	GCA_000420605_1_14_20	GCA_000420605_1_14_20	-	47159	.	PF14078.6	Domain of unknown function (DUF4259)	MGTWGVGPFDNHRAREIVDAVRTGTFDFDVFRETCADDDLDADEAEAIIALGALATAPQEDLPPGIAAARMRCLFTDNRRLWLRHRIEKAIDPDNSTIYALWEATGELDNWVKTARAVLP*	hhsuite_tools	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_002861345.1_02135
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	24559	25149	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	3571	4161	GCA_000420605_1_14_21	GCA_000420605_1_14_21	-	47159	.	PRK14734	dephospho-CoA kinase; Provisional	MRLIGLTGGIGSGKSTVAALFAERGIPVVDADAIARDIVKPGEPALAELADAFGADILDSSGALKRGLLAERAFADTESTQRLNEITHPRIHQVTQKRFQTAREAGEKAVVYDMPLLVDKGLDKDMDVTVVVDVDVDERVRRLVASRGLDEADARRRIAQQISDDKRLAAADFVIDNNGPKKDLAPQVDEVLRRVL*	mmseqs_cdd	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0005	persistent	indirect	.	.	.	GCA_000185845.1_00140
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	25192	27270	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	4204	6282	GCA_000420605_1_14_22	GCA_000420605_1_14_22	-	47159	.	TIGR01995	PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	MASTKDTAQHIVEHLGGAENITSLTHCATRLRFQLRDSSSVDKDALDQDPAVLGTVPQGAHGYQVVMGGGVAEYYNEIIKLPGVNASAEGRNADSGKKNYDGVRGKYGWVDYAFEFLSDTFRPVLWALLGASLIIMLLVLADTVGIQDFRADVDTQPPLFQLAHAMYQSVFYFLPIFVGATAAQKLGANMWVSAAIPAALLTQEFMSMGERGDVLDVSGVPLVINEYGGQVFPPILAAIGLYFVEKALKKIIPNAVHMVFVPFFSLLIMIPATAFLLGPFGIGVGNAISSALYAINDFSPFVLAIVIPLLYPFLVPMGLHWPLNVIMIQNIAVYGYDFIQGPMGAWNFACFGVVAGVMIISLREKNQQMTQVSVGAFAAGIFGGISEPSLYGILLRFRRSYYRLLPGCALGGVVMGLFDVKANAFVFTSALTINAFDPWSGYAIGVLVAFTTSLLLTLFFGYRTAEEKEEAQRLIAERREAERREASRDDAALDDAHRTVEDAGTAEPGDRKASDAAQGSASAPVAASAATTATAGAGVESGVVELDSPLAGHAVPLSEVPDPIFAGAKLGEGVAVQPTGTTVYAPADGKVLTVQKSGHAVGLNLDNGVQLLIHVGIDTVELGGEGFTVHVDKKQRVSAGDKLISFDPEFITARGYNLITPVVVTNSAKCAGVDAVEGEVTPSDTLLRVFGK*	mmseqs_cdd	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0006	shell	indirect	.	.	.	GCA_018499465.1_00760
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	27452	28909	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	6464	7921	GCA_000420605_1_14_23	GCA_000420605_1_14_23	-	47159	.	PRK07899	30S ribosomal protein S1; Reviewed	MPTSNTPQVAINDIGTAEDFLAAVDQTIKYFNDGDIVSGTVVKVDHDEVLLDIGFKTEGVIPTRELSIKHDVDPDEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEDLQERDEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLEPYVGQELEAKIIELDKHRNNVVLSRRAYLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGEEIMVKVIDIDLERRRISLSIKQADEDYTEEFDPSKYGMADSYDEQGNYVFPEGFDPETNEWLEGYDEQRQEWEARYAESERRFQLHSEQIQRHREAAAEAAEAGEDANFSSESQDAAPASSTTEEAGSLASDEQLAKLRDKLAGN*	mmseqs_cdd	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0007	persistent	indirect	.	.	.	GCA_000239695.1_00592
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	29201	29671	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	8213	8683	GCA_000420605_1_14_24	GCA_000420605_1_14_24	+	47159	.	PF06271.12	RDD family	MTMERLVLTGRRILAWWIDAFAVGAVVIVLRWIINAITAHTGALTTAPADGLLNGTAQTTYETIAWAVFFYVYRVIFEGRYRTSLGKWSLGLEVVSPYPSYQVAAVRNSWLLLTLVGIWVYPWQDIIPIVVGATMFIWGQHVFDKLAGAIVPEKMR*	hhsuite_tools	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000477995.1_01982
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	29700	32282	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	8712	11294	GCA_000420605_1_14_25	GCA_000420605_1_14_25	-	47159	.	PDB:4XVI_A	DNA-polymerase	MAFRAFYALPAENFSTSGGQHTNAVYGFLSMLANIVSEEEPDHIAVAFDVGRKTFRTEKFAEYKAQREAAPEAFRGQVDLIREVLDTLGITTLSVENYEADDILATIATQAGDYETLIVTGDRDYLQLVDDHTTVLYPIKGVSTLRRFTPEMVEEKYGLSPAQYPDFAALRGDPSDNLPSIPKVGEKTATKWILKYGNLDELLAHADEIKGVVGGNLRERIDQVRLNRELTQMVTDMDLDVGPDDLAFKTADVAEVAAKLDELEFGQNLRERILTAVPNNGEETAPEPAEDVTIDDEPLATWLDGRRHVAVFLHGDGRPGQGDAQAIGLVDGERHGIQAELAEISPADEKALKEWLESDAEKYFHEAKAAFHMLAGRGITLRGIAHDTAIAAYLLRPGQRSYALADVYQRHLHKSLATSDDQVSLLDDTSLIDQAAAVMELAEALTRQLQEIDSFELYTDMELPLSAILARMEATGIAVDLGTLHEQLDVFTNHVDQELADARSIAGDDKLNLNSPKQLQTVLFETLELPKTKKTKTGYSTAAKEIEQLAAKHPHPFLDHLLAHREYQKLKSTLEGLIKTVQPDGRIHTTFNQTVASTGRLSSAEPNLQNIPVRTEAGRRIRSGFVVGEGYETLLTADYSQIEMRVMAHLSEDPGLIEAYREGEDLHNYVGSKVFDVPVEEVTPELRRRVKAMSYGLVYGLSAYGLSQQLSIPAGEAKKIMESYFERFGGVQRYLAEVVDKARRDGYTATVFGRRRYLPELNSDNRMARENAERAALNAPIQGTAADIIKVAMLRVDKALAGFKSRVLLQVHDELVVEVAPGELADVRATVEREMDSAINLLVPLEVSTGEGHSWDSAAH*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0009	persistent	indirect	.	.	.	GCA_000175635.1_01552
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	32850	33959	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	11862	12971	GCA_000420605_1_14_26	GCA_000420605_1_14_26	-	47159	.	.	hypothetical protein	MSELAEQYGAFFVRRLDKWEPLLGFIGKRPAVEAKLREADRRVVTRLEELVETVGASWTGDDLADLGARWARGELKASTVAGRISSAAGVRDSRGVARVDHVVAGAVGELRTEVDNDELTPGVIAAEVGDLLREVVEEGLREAAEAWSGLPEWLQREVLSEFGIGCKFENLTAKLDLGRDSEEVILAAKRMTRAARQLTKAGMPGVEGPEDFERAIKEFTFLKHGISEEAQRDFLGNLREGATTVDTDVLFVECTDLNPVWGTSEDLVAKGVDEFSVLVDPLGDDKEEYERRAKLVESVRYFRDEFEYLRDLRASTPGSILPPGLDWDELRRRSELRGDELISEWKRWRAGELKSKPVKETGARKRRVV*	.	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0010	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	33962	34570	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	12974	13582	GCA_000420605_1_14_27	GCA_000420605_1_14_27	-	47159	.	PFAM:PF05119.11	Small-Terminase	MGGLKPPTRRETCGTKSGYQAHYRAGERPCVRCRNARSEDHAAKVERSSITTADWEDVVGPMTEPPVGLGRAGLRLWAAATVARRFSPATLYLLVEACRCADVLERLDGAVRSRRGLWLSLKAEAEEQTEGVPRFDVVVDGAVAEQRRQRESLNRVLKQLDLLDVVPAVEPGREKSVLDQLRERRARREEELKNQAKAGSEG*	hallmark_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_030227215.1_01836
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	35159	37312	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	14171	16324	GCA_000420605_1_14_28	GCA_000420605_1_14_28	-	47159	.	PDB:5IKN_F	DNA-polymerase	MLTKNIVPSGEGNNNAHTMNSFELVVSRAEESGLNVRVTEAGKQASIQTPGHSGRDLGTSISYNEARQCTLVHVHNEPTGATEEFLRHIGLELKDLYDNTYSDRYDYSDGFRVIRGRGKKFSQKCPHGSVPSRCTHGCKATIRSLYGVDSLTAPGAVYVVEGEKDVKEIRRNWRSAAVSQAGGSNNDPSKADWSPLKGRDVVIIADNDKPGHKRAQSLSIYLQGLGLDRPESIRVTTAAGAANDAAEHILAGYSPDDLEELEPKIGRRRVRLVAASTVKTESVDWLIDQWIPRGMLTLLAGREGVGKSTIACSWVAQFSRQGMKCAYLNSEDSRSYTVRPRLEAAGANLDNVFFIDVDTETGREGQLRLPADTDLLFNELSSEGVEFVVLDAAKSAMDPRLDGYRDDDIRQFLEPLAANADKHGITILGLAHFGKREGKDTGRLMLGSIAWSQIARSVLSAAVDEDEGRLIVTNTKSNLARGKVSREARLVSHPLVLDDGTKTELGTIQWGEFTDTAATDFLDSTIANNEDDRTEAEAWLEDYLTLHGPSTRAAVFKAAAREKIASERTIKRAFKKLGGTSEQAGFPRQATWSLPSRDSEATKRPRACQSGPTGPTGNDQQKLIGPTVAESQLGHVLKSGPTENQTTSRAATTDVRNLVLNCLSPDNGMTIKTLKGCFTKKDLAQIGDIGTVLNALTDEGLVTRDGKGKFSRSQAAA*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_001815785.1_01012
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	37453	37659	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	16465	16671	GCA_000420605_1_14_29	GCA_000420605_1_14_29	-	47159	.	.	hypothetical protein	MSNDTRTQEIDRLINESRKLTREYGQIVDQKAPWTEADKNRMNELATQSLTISRRIRQLFEGIAAPKA*	.	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0013	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	37656	38150	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	16668	17162	GCA_000420605_1_14_30	GCA_000420605_1_14_30	-	47159	.	.	hypothetical protein	MTTHTEKAPSSAPDNNTAGDQDKECIPVNNSTEPTAHVTAHIACPDKSTGRKVITWSGETLDRILAVKLHFSKKDFKTLLSDTDTTVSVCTHCYEALNRKKAEDAKKLKLTGLEWERDFAVDALVDAHRAGDAEAIEHYAKEAIRFEDERNALSASFDNGQGDA*	.	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0014	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	38147	38269	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	17159	17281	GCA_000420605_1_14_31	GCA_000420605_1_14_31	-	47159	.	.	hypothetical protein	MPAPQDHEHEGEEQFIYRPFEALKDFLDQPDLSTERKQKP*	.	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0015	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	38269	38463	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	17281	17475	GCA_000420605_1_14_32	GCA_000420605_1_14_32	-	47159	.	PFAM:PF13411.5	HTH-DNA-binding-protein	MPATVPKAITVREAASELGVAYSTLISAIRKNETPFPALKIGGRYTIPTRPFYEALGTPVGEVA*	phrogs_hmm	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0016	cloud	indirect	.	.	.	GCA_008726455.1_02068
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	38580	39089	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	17592	18101	GCA_000420605_1_14_33	GCA_000420605_1_14_33	+	47159	.	PFAM:PF10078.8	transcriptional-regulator	MSKPLSFGMAVEGVRKYLGLSRTELQRRLAQNDTPIHMTTLRRIESGEQEPKLSDAQAISKALGVSLEVLTSSEAVPQGLFELALCRATLADKTNAALSSLHEWEQAGIKLAKSISEAENFGIDGPQLAEARTDLRDNFDLSNLTAKLKDYSEARKYWAEYLEDRAANG*	phrogs_hmm	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_927911805.1_01788
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	39082	40209	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	18094	19221	GCA_000420605_1_14_34	GCA_000420605_1_14_34	+	47159	.	PDB:1Z19_B	Integrase	MARGRPATPPGTWGTISTKQLPNGNWQASTWLRLYTGRTKRKRGNGTTKTAAINRLKFNCQEELGTTGDGPLSPSSPLNDALDQWLRQKSDEVREVSYDRYVSAANNHIRPEIGALRLNELQPSRLNVWLKRLSPGPRDTVRTVLNGVFRMAVRDGLMRGNPMTVLERVKSTKKQVRALSSSELTRYRANISASQNDTLIDVVDLCLATGLRAGEALGLRWQDIHLHDDVPYLEVAGTLVYSKSNGHFRSPVPKTDSSRRSVRIARAIQPMLQRREEKYVNFIEPVFPSATGTYIPEANFNRLHRKWRGEEFHWVTVHTLRKTLSTNLSERYGAHAASIVLGHETDRLTQSTYIHKDGRRVDLSDVVDGYLGRGE*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0018	shell	indirect	.	.	.	GCA_015558365.1_01901
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	40840	42165	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	19852	21177	GCA_000420605_1_14_35	GCA_000420605_1_14_35	-	47159	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MGLWVQGWGAQRERMTSRRCAFLELRLEGFSRLEAAEKTGVSKAMSYPVQQGLMTPKANSKRFVPAGPDAERYNRLMALLEFGRKDIRIAGQSIPFAAVDKTISPRYLSITDREYIADCRREGMSMRAIARKMGRAPSTISREPARDCVHGGAYRPCSAHRLSVRRRLRPKPRKLDRNKRLAAAVDAGLKERLSPEQIAGRLPVDYPDDQTMRVSHETIYQSLFIQGKGHLKKDIQQALRRGRARRRSQVKRKRPRFGDEMLMISDRPAEVADRAVPGHWEGDLIIGKAGQSAIGTLVERSTRYVMLLHLPDKHDAVTVKDKLIETIEKLPQHLRASLTWDRGREMAHHKQFSVKTGCPVYFCDPASPWQRGSNENTNGLLRQYFPKGTDLSVHTETDLEFVACQLNRRPRKTLGFYTPAEKLAELLNSHPINDNECCNDH*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0019	cloud	indirect	.	.	.	GCA_002902685.1_02255
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	42621	43853	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	21633	22865	GCA_000420605_1_14_36	GCA_000420605_1_14_36	+	47159	.	Uniprot:A0A0K0NL45_9VIRU	tail-tape-measure-protein-	MAVPTIAAASTAFASIAIAIKGMGDAIGATDTKGLQDAINQLIPSAQTAALSIRDLKDLFDFSGIQEAFFEPLGNLGQVSALIGPLNEVMRTLAGNLGLAASGLVEFLTTNTGLTTMNELLNGTKFAANDLAGGVRNVLKTTVVLGAAAPIFSRMMSHFWNRLRHGRTTPSQLLNTVRCNALSPKKKPLPFHFGRIYPISDGQIKGIFSGIDKAAGSVNINGGFSFLVFLSQVKEWVNSMNGQQALQSYFASAAALLSAISPIISTLASMVMNELYPSFADFVSQAAPGVEELFNGMAECIQPILDKLPEFDEALGEVIGAIDLESLGKTIATVVLPVLETIAPYNDEIVIAIGILVGAIEGIGLVLTVIEAGPIALIVAAIGAVVLAVTTDYREPETFQNILDRIGNWA*	hallmark_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0020	cloud	indirect	.	.	.	GCA_000158635.1_01043
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	44151	44429	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	23163	23441	GCA_000420605_1_14_37	GCA_000420605_1_14_37	-	47159	.	PDB:4U7B_B	Mos-transposase	MPDLVSRKFTADRPNHVYVGDITYLPCKGGKNMYLATVIDAYSRKLVGHALADRMRVSLVIEAFVPCQKSPWKPQRGNLPFRSRQCVHLTGI*	common_virus_hmm	common_virus	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0021	shell	indirect	.	.	.	GCA_000227295.1_00767
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	44792	45046	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	23804	24058	GCA_000420605_1_14_38	GCA_000420605_1_14_38	-	47159	.	COG2963	Transposase and inactivated derivatives [Mobilome: prophages, transposons]. 	MLWPSTKIMRAFSLHVASAELGINRSSLYSWLKQYGTGKRARTKTLRDEAQVMTDSERIRQLEKENAKLREERDILRKAAKYFA*	mmseqs_cdd	nonviral_gene	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0022	cloud	indirect	.	.	.	GCA_024968525.1_01799
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	CDS	45750	46385	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	24762	25397	GCA_000420605_1_14_39	GCA_000420605_1_14_39	-	47159	.	.	hypothetical protein	MKALGAVALLSIGVTANALAASPAHATPAETDSYERIAQTTIELREKEHIDPKAETPDHIVQQVLNESGSTGDKTALRDSGDNYGTSIGRHEAAACATNPYDCKRAKSAIKDAERISSQTFPNKVTNDNIQDADRNCVWQALTTIRANADFARKIGDAHETDHPGSPEAGHMDQTNNAIGRDIGLRHEGDEAGAINECHAKAKNGGLIKIN*	.	hypothetical_protein	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_CDS_0023	shell	indirect	.	.	.	GCA_000477875.1_02052
GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote	cenote	tRNA	32424	32497	GCA_000420605.1	ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605.1_ATVG01000014.1	GCA_000420605.1|ATVG01000014.1	GCA_000420605_1_14	GCA_000420605_1_14@C1	11436	11509	tRNA-Leu	tRNA-Leu	+	47159	.	tRNAscan-SE score: 57.7	Leu		tRNAscan-SE	.	C1	26171	20989	47160	GCA_000420605.1|ATVG01000014.1@region_20990_47160@tool_cenote_tRNA_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits