core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1147260	1148747	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	1	1488	GCA_000463425_1_1_1163	GCA_000463425_1_1_1163	+	1991156	.	PRK05722	glucose-6-phosphate 1-dehydrogenase; Validated	MSSKVIITIFGASGDLAKRKLYPSLFRLYKSGNLSKHFAVIGTARRPWSKEYFESVVVESITDLADSPEQAQDFASHFYYQSHDVQDTEHYIELRKLQNHLNEHYQAEHNKLFFLSMAPQFFGTIAKHLKSEQIVDGKGFERLIVEKPFGTDLASASKLNDDLLATFDEEQIFRIDHYLGKEMIQSIFAIRFANLLFENVWNRDYIDNVQITFAEKLGVEERGGYYDHSGALRDMVQNHTLQLLSLLAMDKPKAFTKDDIRAEKIKVFKHLHKSTDNDLKKLFIRGQYTSGKVDGKKYISYRSEPNVEPESTTETFVSGAFFVDSDRFRGVPFFFRTGKRLTAKGTHVNIVFKQIESIFGSSLQPNVLTIYIQPTEGFSLSMNGKEVGEQFNLAPLTLDYRTDATASGASPEPYEKLIYDVLNNDSTNFSHWDEVRSSWELIDRIESLWANNEVPLHQYKSGTMGPKASFDLLNQFEAHWNWQPDETYRKEGRLG*	mmseqs_cdd	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0001	persistent	direct	high	1487	0.999	GCA_000463425.1_01200
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1148800	1150302	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	1541	3043	GCA_000463425_1_1_1164	GCA_000463425_1_1_1164	-	1991156	.	PRK10416	signal recognition particle-docking protein FtsY; Provisional	MGLFNRLFGRQKEEKPVENILEEAVEIVPEDNQGKNLEIAEKDSVENAQSENLDEQKLQTELKERLAEDKTRLETIQEKVEEIDSDMAETEARIESDERDSQVPESHALQSEMADSQPVNKEKSFSQTPTQQAGAAADLQARLVEARRLQAEQEKMRQLDEANAASAETISENFSSLTSTNEAVDANSSIQEETVQEKYDRSLKKTRTGFGARLNAFFAAFRSVDEEFFEELEELLITSDVGVQVASNLTEELRQEACLENAKKPDALRRVIIEKLVDIYEKDGQFNEKINLQDGLTVMLFVGVNGVGKTTSIGKLAYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVYDGMERAKDENVDILMIDTAGRLQNKDNLMAELEKIGRIIKRVDPVAPHETFLALDASTGQNALVQAKEFSKITPVTGIVLTKIDGTARGGVVLAIRQELDIPVKLIGFGEKIDDIGVFNSENFMKGLLEGLV*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0002	persistent	direct	high	1502	0.999	GCA_000463425.1_01201
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1150315	1151127	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	3056	3868	GCA_000463425_1_1_1165	GCA_000463425_1_1_1165	-	1991156	.	cd07516	phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	MVDIKLIALDLDGTLLNSDKKISARNLATLKLAQEQGIKVVLTTGRPLKAMELFLNELGVANQEDEYTITFNGGLVQRNTGEILDKTVFAYDDVTRIFEETEKLGLPLDAICEGAVYQIQSDHESLYQTCNPALTFESVSFADLSSQQTYNKCVTAYAPDLLDRGIAQFSSDLFDKYEIFKSRDMLLEWSPKNVHKANGLEKLISHLGIEQSEVMTCGDEANDLSMIKWAGLGVAMQNAVAAVKEVANVVTPMTNDEDAVAWAIEKHVLK*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0003	persistent	direct	high	812	0.999	GCA_000463425.1_01202
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1151127	1151999	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	3868	4740	GCA_000463425_1_1_1166	GCA_000463425_1_1_1166	-	1991156	.	cd07518	Escherichia coli YbiV sugar phosphatase/phosphotransferase and related proteins; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli YbiV can act as both a sugar phosphatase and as a phosphotransferase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	MREVVLGFELHNPLGFCTPLKGKWLDCMIKLIATDMDGTFLDDKGQFDMVRLKNLLLRFKEKSIYFAVASGRGLLSLEKLFEDVQDEIIFIAENGSLVEFRGKDLYEATMSKDFYLSAFEKLKTSPYININELLLTGKKGCYVLETVDPAYLAFSTHYNENIQKVARLEDITDEIFKFTTNFSEETVAAGEAWVNQHVPGVKAMTTGYKSIDIVLDYVDKGVAIVELAKKLNLEMDQVMTFGDNLNDLHMMQVSGYPIAPENARPEILEVAKEVIGHHAAHSVMTYMEGL*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0004	persistent	direct	high	872	0.999	GCA_000463425.1_01203
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1152084	1153616	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	4825	6357	GCA_000463425_1_1_1167	GCA_000463425_1_1_1167	-	1991156	.	PDB:4BQQ_A	Integrase	MKKVITIEPAKQVTHMVDLPSFTKRRVAGYARVSTDHEDQTTSYEAQMTYYTDYINSRSDWEFVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKSVSRFARNTVDSLSTVRKLKEAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSISENVTWGRRHQLAEGQVTFSYSQVLGFKKCDTGGFEIDQEEAKIVRYIFHQVLLGNNPNKIARELTAQGIPTPQGKRKWSYGTVKRMLRNEKYKGDALLQKSFTTDFLTKSTKPNEGELPQYYVENNHEAIIKREVFDLVQVELDKLEKKRQTSNIFTGRLFCGDCGSAFGSKVWHSTSKYKRTIYQCNAKYKGEHKCQTPHVTEEEIKGWFLSAMNQLLGNREEIIANTELLIDMAKDTTPLESEIADLERHLETIRQDIEDLVDRNARKAQNQDLYQEQYDTLVTAYQEKQKELQETRSALEEQKSKQLSLDGFIQKFKEQDASSQTSTKNSGRPALSDWISKKIRKSA*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0005	shell	direct	high	1532	0.999	GCA_000463425.1_01204
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1153619	1154827	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	6360	7568	GCA_000463425_1_1_1168	GCA_000463425_1_1_1168	-	1991156	.	PDB:4BQQ_A	Integrase	MKQIKTIQAQKVTTIKRLKVAAYTRVSHTSLLQSLSNQISHYSQMIQANPEWDYVGVYSDSAISGRSQAHRRDFQQLLEDCHKGKIDLILTKSISRFGRNTVELLETVRELKRLGISVRFEKEKIDTLTAEGELLLTLLASMAQEESQSISQNIRWRVKKRFEEGKPYIPQDIFGYRWNGEEYMIEPHEASIVRQVFEWYMEGLSAPKIAKRLDDRGERTRLGNRFTQRVIYNMFDQEAYCGRLILQKTFRDHFSSRSIPNDGQMAKYIVENAHEAIVTPEYFQLVNQEKKRRARRRVSKHDALARLQGKVYCEHCGLDMILTLETKSNQEKRVRYYCRTRDGKGVEACLGRTVTEEQLFQAFGESINIEDIHHISFNSVTNEAKVTYRNGKEKHVIIQKGR*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0006	shell	direct	high	1208	0.999	GCA_000463425.1_01205
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1154884	1155045	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	7625	7786	GCA_000463425_1_1_1169	GCA_000463425_1_1_1169	-	1991156	.	pfam20612	hypothetical protein	MTEQDFQQELTYQLTMAQAKKLLSQGLISEAIFQEFKAKMLQKYEPFMSQLVA*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0007	shell	direct	high	161	0.994	GCA_000463425.1_01206
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1155042	1155443	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	7783	8184	GCA_000463425_1_1_1170	GCA_000463425_1_1_1170	-	1991156	.	PFAM:PF05766.11	HNH-endonuclease	MTPEQKAAIRYLREQGLGYKAIGVKLNLSSNTIKSFCRREVIEAGEKTDELLPDYCHACGRVLTHIDGKKKKRFCGTSCRQIWWNSHLEEVNRQAYTEHVCLACGGEFTSYTNPKRKYCSRKCYVTARFGDKK*	phrogs_hmm	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0008	shell	direct	high	401	0.998	GCA_000463425.1_01207
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1155553	1157022	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	8294	9763	GCA_000463425_1_1_1171	GCA_000463425_1_1_1171	-	1991156	.	PDB:5UDN_B	lysin	MGKHLVICGHGKGRTTYDPGAVNTKRGITEAGKVRELAKLMSKYSGKNIDYITDQNVYDYKSLASIGKGYDSITELHFNAFNGTARGTEVLIQSSLTADKEDLAILSVLSRHFQNRGIKKVDWLYNANEAKNRGYTYRLVEIAFIDNEEDMTIFDNKKEELAKGLVSAITQEEVKTVVSATPSKQGGQPNSSTSPVYHVGDSVRVLGHATHYQTGQAMASWVKGRSYKVLQIKAVNQSRSKRAYLLEGITSWVLEQDVEGTTLGHSEQTYTAQKGDSYWRIARKFGTTVDGLLALNGLKKTDVLKIGQTLKVHKATSSIKAVATSLAQRTVASALSKVGQKVTVPTNPYGGQCVSLVDKIVQEMTDKDMAYTNAIDCLTKAKSNGFTVIKDAWGVNPKAGDFYVIKTDGHPYGHIGICITDSDGTTIDGVEQNVDGYSDHNKNGINDQLEIGGGGITRRVKRVWMADGSLYDVTGTVKLGKVIGWFRLG*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0009	shell	direct	high	1469	0.999	GCA_000463425.1_01208
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1157024	1157428	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	9765	10169	GCA_000463425_1_1_1172	GCA_000463425_1_1_1172	-	1991156	.	PFAM:PF05105.11	Bacteriophage-holin	MKELLATNKVLFSAIGGLIGSIFGEVDGVLYALFIFLIIDYVTGVFAAVVEKNISSSIGFKGIFKKIAILFLVSVGHLIDTEIIKQGGAIRSMVIFFYLSNEGLSILENAVRIGLPIPEKLQALLKQFNEKEGD*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0010	shell	direct	high	404	0.998	GCA_000463425.1_01209
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1157446	1159302	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	10187	12043	GCA_000463425_1_1_1173	GCA_000463425_1_1_1173	-	1991156	.	PDB:5IV5_CF	Baseplate-wedge-protein	MADYGSNNDRGYTLLLRVEETGTSTANNTSTVRVQLWLKNGYTTFGMYDCRASVSINGQTLSWSGRPDMYTAHSSLHLIDKTITVPHDSNGSKTISFSATFSGSGGWSPGTLNTGSQTLRLSDIPRSSSATVSGNMMGQAVTITIKRASSDFTHNITWHFGSLSGTIGTGIATSVTWTPSISQLATQIPNSTSGNGHLTLATIYGGKTIGSMTIPITLNLPTSVVPTLGSISVSESHVTAKTILTGTSFAQLVSNPKVTFNQGVGVYGSTIPSTGFRAEVFKFENNQWVQLPNVATSNNGLLGGINWIGRAKVSAYVTDSRGRQSARKEVEITLLEYFKPIFSFSAVRAGSSMNQVTVTRKLKIAPLTISNVQKNKATLTWEVVDLASGQKVTNAGGAANWTSTTEHTKTDFQTILGGTYDTTKSYNIIGKLADLFYATTFEFTVGPEKVVYGLSPSGMGIGKAWTRGVLDVEGSLPAYFDGEIYMKNKKLLDIFYPVGVIYESTSNISPATIMGGSWERFGNGRVLVGVSENESEFNSVNKTGGSKTHTLTIDEMPSHSHAQYVSANNGNKAIRRDYGSDGNSNTYPQGNNTGNTGGGKPHNNLQPYVTVYRWRRIA*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0011	shell	direct	high	1856	0.999	GCA_000463425.1_01210
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1159315	1162233	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	12056	14974	GCA_000463425_1_1_1174	GCA_000463425_1_1_1174	-	1991156	.	PDB:3GS9_A	tail-protein	MMLYLLGGQTKTPKWNGQPLFETVSATVEEELNGTFQLHLTYPITDSGIHETLRADELILCPTPDLGKQLFRVKQVKIQDDTIELECYHISDDMMKRQIKPFSATNTTCQSVLMRLVEACPSDLGLFSFDSDVTERHTFVSDEDLTLYQALMDGKHSLLGIWEGELVRDNFQLIVKQHRGNDKGVILTSHHNLKAFEDKGDSEKVITRIYATSTFQAEGSDVDTVLSVVVESPLINQYPYIYEERYENNTLQTEEELRQWAMAKFTHEHIDHISRQITVEAYQLDGQEVHLGDTVTLKSQKHKVDVKKKAVGYTFDALEEVYLSVTFDDEVSVRNSGSSGVNSLTSAAKTILDVNQSVTEHRASKERANFNKVFDRQFERLQTEVEDGIAMAKAEGERSGKKAALDYLATDALEARVAALQKAKIDELTVSSSAWMTRLVSQQILSEYVKSLEVEADRVVIPGQHTPVFSLDRDGNLSIDTPILKVRGESLATKVDLKTISLTPGPKGDAGADGVGIQSRELYYLVSAQKTGLTTTSTGWSKTIPSLTTTLKYLWNYEKTTFTNGSTTVTTPVVIGVYGDKGVDGKAGKDGKTLYTWRMYADSDKGDGISAVSTGKRYLGLAVNRESATHSTNPSDYTWSSFFEGTELGGRNYIDDYAMKAATFSSVTSEWKKEVVEDTSSVSGVTVKMTCTKAGTAGFHRNFYDLRSRIGAAMTFSIDIKCSKTVTLNIGSELGGTKAYEVTTDWQKFVSSWKVSSNQYYSYVFYLKSGVWAVGDVVYLRNVQLEDGNVASAPGPSLNDLIAQIDAKADNSFMKQQLDLLTEKTESLRVDLEARALAKEVADWLKSYKEFEKNNEAVLAQFNQDFIDNTARIAAIEADLKANSLLLNFVNTYLRAGDNGVIIGKKDNSEYIELTPQGMMIKSAGNAVMTVTAGVIKIHHGVFVETLQVGYYRLEAARHNAKHLVCRFIDAK*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0012	shell	direct	high	2918	1.0	GCA_000463425.1_01211
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1162230	1162955	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	14971	15696	GCA_000463425_1_1_1175	GCA_000463425_1_1_1175	-	1991156	.	PDB:2X8K_A	Distal-Tail-Protein	MIKHNELVLNGKGTSSFPFKVLVEDRPSIQVPRSKTQLLDHRGLSGAIVQTNKHRDVIEKPYRLYLIGASEKEVNEFSAYLMQEGFWLESERLKLTRLWCYRTDSFDIKQDDHDVYVSDVTFIYHPTRFFKSVDRQVLSANGVLKTQGSALAFPTITITGQSVSETSFTVGDQVIRIEKFTEPLVMVNHPDRPSFKTLSGKAVKWSGDFITIDASHPTQSVGVVLGSGILSLTFETNWGWV*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0013	shell	direct	high	725	0.999	GCA_000463425.1_01212
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1162952	1166071	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	15693	18812	GCA_000463425_1_1_1176	GCA_000463425_1_1_1176	-	1991156	.	UniProtKB:R4KJ43_9FIRM	Minor-tail-protein	MAGNIKGITIEIGGDTQPLQNALKGVNKQASEATKELRQIDKALKFDTGNVTLLTQKQEVLAKQVETTKEKLSTLRQAQSQVEAQFKAGNIGADQYRAFQREVEGTQTVLKGYESKLESVNRALSENGAQVETNQSKLNRLQNEQAQLVSESEKLNSSFKLQESALGSTASEADKLALAEQKVAYHSEILEKEIHNLEQQLSLTKSEYGENSIEANKLEKTLNETKTAYNNLQNEMEELASSSASSKASLEETNSLLKADLLMEFGDQLGELSQKLIDFGQQSLDAFLEVDEGMDIIVTKTGATGSALEEMTDIAKSLATELPTDFNTAGSAVGELNTQFGLTGDALKSASTQLIQFSEINGSDVTSSAISAKQAIEAYGLEATDLSSVLDTVTYTSQATGVGVQELMDKAVAGAPQIKALGLSFDEGITLMGQFEKAGVDSSAALSSLSKAAVKYAGDGLTLQEGLAGTIEQIKTSTSETEALSLASEIFGSKAAPRMVDAIKRGALSFEDLAGTADKAAGIVTQTYEGTLDPIDKFTTAQNTAKLAMAEMGDAIAATLAPILEVLASLLQAVATWFSGLSEPVKQFIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVGIILGVIAVVALLVVGIQQLWQHHEGFRTAVTEIWNAIHAFLSVIIQQISSFVMSIWGTLTTWWTENQQLILNAANTVWTAISTVIQTIMTILGPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQLITGDWSGAWETIKQAVSTVWEAIKSLISIVLNAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVSSIWNGMKATISGVLSGISSTVSSVWNGVKSTITNAINGAKNAVSSAINAIKNLFNFKIKWPHIPLPHFSMSGSANPLDWLKGGLPKISIQWYAKGGILTKPTAFGMTGNSLMVGGEAGREAVLPLNNQTLGSIGRSIAATMPNKGTTITVNITDVVIREEADMKKLADYVAGRLADEMARQALLRGGTV*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0014	shell	direct	high	3119	1.0	GCA_000463425.1_01213
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1166254	1166673	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	18995	19414	GCA_000463425_1_1_1177	GCA_000463425_1_1_1177	-	1991156	.	PFAM:PF12363.7	Tail-assembly-chaperone	MRQNITIAGKTYPLATNAYTPIAYKEQFGKDYFQDLFNMLSAESIMTQLEQLEEGEELKASQIDLSILSDFDMTFFHRLFWVFAKSANPRIKPFEDFFMSMEEFPLQEVGPVLMSMLNQGMTTRKKQMNQKQRVRKSSR*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0015	shell	direct	high	419	0.998	GCA_000463425.1_01214
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1166685	1167254	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	19426	19995	GCA_000463425_1_1_1178	GCA_000463425_1_1_1178	-	1991156	.	PFAM:PF04630.11	tail-tube-protein	MAEKNKVTFGLQDVHWAEVTSEGADGALTYGTVERLRGAAELTLEPTGDKGSYKADNINFYTTESNDGYEGTLKVALLSQEFLTRVLGEQLDATTNTISEIASSKKKNFALMFRFEGDKKETLHVLYYCYASRPNVGSKTKSGSDINEVELTFTASPRPLDKIVRRRTTEETSDEIRENWFKSVFEPIA*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0016	shell	direct	high	569	0.998	GCA_000463425.1_01215
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1167257	1167583	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	19998	20324	GCA_000463425_1_1_1179	GCA_000463425_1_1_1179	-	1991156	.	PDB:3FZ2_H	tail-completion-protein	MRFEDLFPVLKETKLPVAYHHLEEGHSPSPPFVVYLVTDSDNLGADNWTYHKRLNVQIELYTTKKDLATEKTVESVLDAHRLYFDKVETYITSEKLYQTIYSITLLGG*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0017	shell	direct	high	326	0.997	GCA_000463425.1_01216
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1167592	1167960	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	20333	20701	GCA_000463425_1_1_1180	GCA_000463425_1_1_1180	-	1991156	.	PFAM:PF04883.11	putative-tail-component	MTRIGLDDLASVIEKELTTYAKETTDTMREVVEEVTDAAVENLMVMSPKRRGKYARGWKSKTTTDTNTALTKTIHNRTPGLTHLLEDGHAKQNGGRVEGRKHIAPVEKRVIQSFEDKLRQKL*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0018	shell	direct	high	368	0.997	GCA_000463425.1_01217
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1167953	1168291	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	20694	21032	GCA_000463425_1_1_1181	GCA_000463425_1_1_1181	-	1991156	.	PDB:2KZ4_A	Head-tail-adaptor	MKIAHLREQLVFQEKRIRQDAIGNESAIWDNLFMRWCSCRPLALTESDGSATKLIHNKVQFTLRYDKKVLTLNTLTSRIYFRDHFYAIESLDGDTVPRQLIYIVATKEESYD*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0019	shell	direct	high	338	0.997	GCA_000463425.1_01218
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1168291	1168548	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	21032	21289	GCA_000463425_1_1_1182	GCA_000463425_1_1_1182	-	1991156	.	CDD:cd08054	Head-Tail-Connector-Protein	MITLEEAKLYLKVENDEEDFLIEQLIATSQQLCEDILRQSSTSEVLKTAILYGVAFLYEHREEANHKELKETLYHLLLADRKDVF*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0020	shell	direct	high	257	0.996	GCA_000463425.1_01219
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1168545	1169753	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	21286	22494	GCA_000463425_1_1_1183	GCA_000463425_1_1_1183	-	1991156	.	PFAM:PF06673.10	Major-Capsid-protein	MSKLLELKEKRNAAWAQAKAFLDTVRSEDGLVSDEDSKRYEEMEAKIELYNKEIARLERQEKIDLELAQPNSHALTTQPTVIVDNQKEDEKKGVASDIYTQTFWTSVRKRNFYDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIKTSSGERKIPVVTGHGSASWMDENGLYPETDETFGQVTLDSHKIGTAIRISEELLNDSVFDLESYMTSEFARRIGTEEEKSFLVGDGSKKPTGIFTQADVEGPTTATKDITFDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFAPLPESGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEAVKILTIKGKGL*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0021	shell	direct	high	1208	0.999	GCA_000463425.1_01220
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1169767	1170465	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	22508	23206	GCA_000463425_1_1_1184	GCA_000463425_1_1_1184	-	1991156	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MRQFWNFTDEGEVRTLRIEGQIADETWFGDEVTPQLFKKDLLSGKGDITLWINSPGGDVFAAAQIYNMLMDYKGNVHVIIDGLAASAASVIAMAGTTVSMSPVAMMMIHNPWTFAQGEAKDMAKVIEMLGEIKESIINAYELRTGLSRTKISHLMDSESWFNAKKAVELGFADKVLFEKEETPEQDHQNSYTFSRVTAAHDLVVKLQASLQPPKPQKTIPINQLEKRLNLLK*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0022	shell	direct	high	698	0.999	GCA_000463425.1_01221
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1170440	1171747	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	23181	24488	GCA_000463425_1_1_1185	GCA_000463425_1_1_1185	-	1991156	.	PFAM:PF06074.12	Portal	MGLLDLLGRKRARDKPQNSYEGQDFSYLFGRTTSGENVDEFKAMQTTAVYACVRILAEAVASLPIHVYELTSNGKEKKIDHPLYFLLHDEPNPEMSSFILRETIMSHLLIWGNAYVQIIRDKAGRVISLYPLLPDKMSVHRDDSGKLYYKYQRQTEENPNFKDKGTVLLKQEDILHVPGLGFDGLIGYSPIAMAKNAIGMTLATENYGAAFFKNGANPGGVLEHPGILKDPKRVRDSWNAVYNGATNAHKVAVLEEGMKYTQVGIPPEEAQFLQTRKFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFLPEEKKRYLIKFNVDGLLRGDYQSRMNGYAIARQNGWLSTNDIRELEDLNLLSDEEGGNLYLINGNMTKLKDAGGFMKQPSETDPAEDLPEEEEDATILEFY*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0023	shell	direct	high	1307	0.999	GCA_000463425.1_01222
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1172126	1173718	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	24867	26459	GCA_000463425_1_1_1186	GCA_000463425_1_1_1186	-	1991156	.	PFAM:PF03354.14	Terminase-large-subunit	MTYHYEPSPFMLPTSHYDKARADRAVTFISNLAHTKGKWAGKKFDLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQASIVFDVAKQMVLMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDKNSICYELHTKALDILKGRKKDTSFYPVVYGLSDEDDWNDEANWLKANPSLGHTIGIDRVREAYQQALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNAPIDYEALKGRDCYAGLDLSSTSDITAFVLVFPPRHSGENYIILPFFWLPEDTLELRCRRDHVLYDVWERQGYIKTTEGNVVHYGFIEAFIEQLSETYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKELYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQGDETSVYDERGILSF*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0024	shell	direct	high	1592	0.999	GCA_000463425.1_01223
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1173715	1174188	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	26456	26929	GCA_000463425_1_1_1187	GCA_000463425_1_1_1187	-	1991156	.	PFAM:PF05119.11	Small-Terminase	MAVRGRKPKPTNLKILEGNPGKRPLPTNEVKPKQKAPRCPQWLEDDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDAEVGTGDEMEDLLGDIL*	hallmark_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0025	shell	direct	moderate	315	0.665	GCA_000463425.1_01224
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1174237	1174446	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	26978	27187	GCA_000463425_1_1_1188	GCA_000463425_1_1_1188	-	1991156	.	PF14192.6	Domain of unknown function (DUF4314)	MNDKILNRIKSTYPEGTRVRLVQMDDPRPVPVGILGTVIDVDDIGSLIVSWDNGQSLNVLYGIDSVEKI*	hhsuite_tools	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0026	shell	direct	high	209	0.995	GCA_000463425.1_01225
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1174448	1174702	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	27189	27443	GCA_000463425_1_1_1189	GCA_000463425_1_1_1189	-	1991156	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MTTQTTLENAYSLYPATASIVPFKNWLIIAYQSYKGINLHIFETVENLDEFPQEERRFNLIIDSEETFQDQGHAVKWAFETLGA*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0027	shell	direct	high	254	0.996	GCA_000463425.1_01226
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1174764	1176044	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	27505	28785	GCA_000463425_1_1_1190	GCA_000463425_1_1_1190	-	1991156	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MTLTFLDFFSGVGGFRRGLELAGMTCLGYYEKDKFARKSYEAMYDTEGEWFHDDITRIDPTQLPKADLWTAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLIQSQKEEDKPEWVLLENVKGLLSSGGGRDYLDYLSILDEAGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRQILPLSGEGGSHLKQLIGGMQSYRVYDPSGIAKTLVGEGGGLGAKTGLYLIDQSLTNPKLTDEARCITARYTAGATKRTAMNSGVLEVQPILTPDRVTKRQNGRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAEVGDSVDLSYPGSQTRRARVGKGIAHNLSCGGQMGAVVWKGRVVKIRRLTPRECFRLQGFSDDLFDKAQAVNSDAQLYKQAGNGVTVTVVYAIGKAMLEANKSANNKQK*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0028	shell	direct	high	1280	0.999	GCA_000463425.1_01227
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1176041	1177297	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	28782	30038	GCA_000463425_1_1_1191	GCA_000463425_1_1_1191	-	1991156	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MTTQPNMEIKELPLSDLKPASYNPRKKLKKGDKEYEKIKQSLLKFGYVDPIIVNEDLTVIGGHQRLTVLKDLKYETAKCVIVSLSKEDEKALNIALNKITGQWDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSEDDFDVEEELKKPTVARRGDIWQLGKHRVICGDSTKAETYDQLLGDKKANLVVTDPPYNVDVEETAGKILNDNMSDGDFYQFLYDMFTQVESHMEADASIYVFHADTEGLNFRKAFKDAGFYLSGCCIWKKNSLVLGRSPYQWQHEPCLFGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIQLMAYPIQNSSMRGTLVLDPFLGSGSTLMAADQTGRVCYGIEVDEKFVDVIVKRYMESTANSDVTVIREGQILTYDEAKAQMEEHL*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0029	shell	direct	high	1256	0.999	GCA_000463425.1_01228
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1177269	1177691	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	30010	30432	GCA_000463425_1_1_1192	GCA_000463425_1_1_1192	-	1991156	.	PFAM:PF05551.10	HNH-endonuclease	MRSQGLGYGTIAQAVNLPRDAVRKFCSRRPELKGYGHVVQQTIEEQGYDYCLTCGTKLDHKLVGRPKKFCSNRCRAIWWRDNQSQHDKTKTAYDELTCQNCGRSFLSYSNPTRKFCGHPCYIDYRFRKGVRNDNATQHGD*	phrogs_hmm	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0030	shell	ambiguous	low	30	0.071	GCA_000463425.1_01228
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1178411	1178800	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	31152	31541	GCA_000463425_1_1_1193	GCA_000463425_1_1_1193	-	1991156	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MTGRKIVADTYGGFSHHGGGAFSGKDPSKVDRSAAYMARKIAKDFVREGYAKRCEVQLAYAIGVAEPVGVYVNTFGTSDYALEQLVGVVRERYDLTPQGIIKELNLLDVDYTKTTCLGHFTKPYLPWEQ*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0031	shell	direct	high	389	0.997	GCA_000463425.1_01229
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1178787	1179452	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	31528	32193	GCA_000463425_1_1_1194	GCA_000463425_1_1_1194	-	1991156	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MILTSEQVSSGHPDKLCDQISDAIMTECLKHDKNSRVAVETLIKDNQVVVAGEVSTKHFFNLEGIVKKVLEPYDMEDIMVTNLLGVQSPDIAQGVNKGGAGDQGIMFGYATDETPEFLPLPYVLATRVLEKLTSLGHPALGKDAKAQVTYDYENKRIETFLVSIQHDEEVDLASVKRIVTQAMISVAQRYRQNLDFRVLVNPTNRTLCSRRLLRRRWCDWS*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0032	shell	direct	high	665	0.998	GCA_000463425.1_01230
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1179500	1179682	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	32241	32423	GCA_000463425_1_1_1195	GCA_000463425_1_1_1195	-	1991156	.	.	hypothetical protein	MTKGQQEKLNALLTAIAQEELLVETLETRKSDTLDFYDVSVWGIKRALERAYEAGQQSVK*	.	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0033	shell	direct	high	182	0.995	GCA_000463425.1_01231
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1179876	1180352	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	32617	33093	GCA_000463425_1_1_1196	GCA_000463425_1_1_1196	-	1991156	.	PFAM:PF05263.10	transcriptional-regulator	MDKAEYILTHYNELKGDLEMLKYRLENFKPVTENEVIGSLVFERSDEPKVTYTPSNQRSEVLALSFRDKMIQENEELLADLTQRYIRLVNDLDNFEMAIRFLKDDLAEFAQEMLKPECNWDSLMREFHISRSTVRNWRRKVLDHVRGVYLKMGYSLEK*	phrogs_hmm	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0034	shell	direct	high	476	0.998	GCA_000463425.1_01232
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1180345	1181721	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	33086	34462	GCA_000463425_1_1_1197	GCA_000463425_1_1_1197	-	1991156	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MKLSLHDYQEVTKDFIIRTPYTAVILDMGMGKTATTLSAINELMFDRYEVSKVLVIAPLRVANTVWSDEIEQWEELRHLRYAKIVGTPKQRRAALEQDADIYIVNRENLPWLVEQCSSYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRVVGLTGTPTSNGLMDLFAEFKVIDGGKRLGRFIGEYRSRYFREGARNGQVVYNYIPMDYAECQIYDKIDDITISMKAMDYLKMPELISTKKVVHLTDKETENYKQFRKDYVLSDLEENEVTAANAASLSNKLVQMANGAVYSDDNQVVSLHDQKLDALEDIIEAANGEPVLIAYWFKHDLQRIEERLAKLKVKGTVLKTEQDIREWNKGNISVGLLHPASAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWRQGQQADTVVIQHIVTEDTIDEEILKALENKDAQQSRLIEAVKAQVGGTDG*	rep_hall_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0035	shell	direct	high	1376	0.999	GCA_000463425.1_01233
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1181702	1181983	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	34443	34724	GCA_000463425_1_1_1198	GCA_000463425_1_1_1198	-	1991156	.	PDB:4QBL_E	Nuclease	MREKVVEQKLVSEVKKRGGICPKWVSPSFGGVPDRLVFLPKGKFGMVELKAPGGKPRLLQVTRHKMFDGLGFKVHVLDSIEKIGEVLDEIEFT*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0036	shell	direct	high	281	0.996	GCA_000463425.1_01234
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1182265	1184553	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	35006	37294	GCA_000463425_1_1_1199	GCA_000463425_1_1_1199	-	1991156	.	PFAM:PF04735.11	dsDNA-helicase	MQFTLSHSGQTGIQTTTVYPHQVMISDKTTLQKVAHFDHVAGLFTNNTRSNANFIKSDVLVMDIDNDHTDTPDEWVTEELLKELFADYNFALASSRNHMVQKGDKAARPKFHIYFQINEVMDKDVYALLKEELVNRYGFFDTNAKDAARFFFGNPNAQVLWHDSWLTIDEDLLDDMVAQDGEEDFDADFYQPPTGPITEGSRNSTMSVFAAKILKRLGVTKEARDGFDEQALKCVPPLEKGELDTIWGSAVRFYNKTIKNSKDYKLPEEFQRESLKPDDYSDVGEAGVLAREYANKLAYTNATDYLFYDGTHWRENKQLALGAVVHFTDDQLAEANTFLEATEKQLQSSGIDEMTIKAGGKRLENAVETPLQLKYLKAYLVAKEFHKFVMKHRDYKNLMAVYNTAKPMLTVELSELDSDDMLLNTPEATYDLRQGTKGQQAHNPDDYITKMTAVSPSDKGHDLWQESLATFFCNDQELIDYVQKIIGMAAIGKVYQEHMIIAYGGGANGKSTFWNTIARVLGSYSGKLSAEALTMSSKRNVSPELAELKGKRLVIASEMAEGMRLNTAVVKQITSTDEIQAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGTWRRLVVIPFNAKITSRSDIKNFADHLYDHAAPAIMSWIIEGAEKAIKANFKTSVPVAVSNSVKAYREANDWLGHFLSDCCEVGDQLTEKSGELYSQYRAYCAKNMEYTRSTTDFYSALDQAGFRRKRTSKGNLILGLKLVEDDYDFLD*	rep_hall_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0037	shell	direct	high	2288	1.0	GCA_000463425.1_01235
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1184803	1184916	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	37544	37657	GCA_000463425_1_1_1200	GCA_000463425_1_1_1200	+	1991156	.	.	hypothetical protein	MENTINRQEQEDLTDTLIAISVIARLLARKLQKEETK*	.	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0038	shell	direct	high	113	0.991	GCA_000463425.1_01236
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1184913	1185236	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	37654	37977	GCA_000463425_1_1_1201	GCA_000463425_1_1_1201	+	1991156	.	.	hypothetical protein	MSQHKQLLELITEMEGTAKYYLRLVDEFKKLLSSEEETETTSEEPKPEPQKVLKLEDVRAVLATKAKDGYKNEVRALLNKYGAESLSALANEHYAAVLEEAGGIGND*	.	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0039	shell	direct	high	323	0.997	GCA_000463425.1_01237
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1185229	1186350	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	37970	39091	GCA_000463425_1_1_1202	GCA_000463425_1_1_1202	+	1991156	.	pfam10926	Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	MTNHAVLSASASHRWLNCPPSVRLTEEMPDVTSEFALEGTDAHELCAYLVEKALGRKVRDPTKDLSFYNEEMQTCAEEYRNYVMEQVEKAKGYSRDPTVLVEQRLDFSIWVPEGFGTGDCLIVADGLLQVIDYKHGLGILVDADHNPQMMCYALGALEMFDDLYDFDKVTMTIFQPRKNNISTFEIDKAELLEWAETELSPKAELAFKGEGEMTSGKHCQFCKLKNVCRKRAEDNLALAKMEFREPSTLDYEDIAEILPKLDLLVSWASDIKAYALKEATEGHSIPGYKLVEGRSVRKFSDEAAVSQAVIKAGFDPYERKLLTITAMSKLLGKKTFNDLLGGLIVKPSGKPTLVPLDDSRQEMNLAKNEFKEV*	mmseqs_cdd	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0040	shell	direct	high	1121	0.999	GCA_000463425.1_01238
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1186355	1186918	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	39096	39659	GCA_000463425_1_1_1203	GCA_000463425_1_1_1203	+	1991156	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSTKVQTTKVITGKSTRFSYLNANEPKSINGSTPKYSVSLIIPKDDIETVDKIKAAIELAYKEGEAKLKGNGKTVPALSILKTPLRDGDLERPDDDAYRNAYFVNANSPHKPGVVDGNRQEIIDTSELYSGIYGRASISFYAFNSNGNKGIACGLNNLQKLRDGEPLGGRTRAEDDFATDDDDDFLN*	common_virus_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0041	shell	direct	high	563	0.998	GCA_000463425.1_01239
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1186937	1187104	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	39678	39845	GCA_000463425_1_1_1204	GCA_000463425_1_1_1204	+	1991156	.	.	hypothetical protein	MDIYTILLCTILGIYVFLGLYLNYMTIRDDIRREKERKAEKKRPDNNTTPLHRSR*	.	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0042	shell	direct	high	167	0.994	GCA_000463425.1_01240
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1187153	1190035	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	39894	42776	GCA_000463425_1_1_1205	GCA_000463425_1_1_1205	+	1991156	.	CDD:cd08642	DNA-Polymerase-I	MPIKELSIDLETYCEVDLRKSGVYRYAEDDSFEILLLAVSVDNEPVTVYDLTKEELPDEILQALVDDTIIKWAFNASFERICLSNWLNKHHPELLSEGFLSPNSWRCSMVWSAYLGLPLSLEGVGTVLKLKNQKLKEGGDLIRYFCLPCKPTKVNGGRTRNFPNHAPDKWSAFIDYNKRDVEVELAIKEKLRNQPVPDFVWDEYHQDQIINDRGIGIDIDFVKAAIAIDGESKTKIQEELRELTGLENPNSVLQMISWLREHGVTTDSLDKKAVKELLKTVDDKTAQVLKLRQQAAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARELFKTGDLEATELFYDTQDTLSQLIRTAFVPNHSKKFIVCDFSAIEARVLSHIAGETWRSKVFEQGKDIYCMSASQMFGVPVEKHGQNSNLRQKGKIAELACIAEGELVLTNKGLVPIEQVSTKMKVWDGLNWVSHEGVIYKGKREVISYDGLTATPDHLVWIEGKSEPVPFGKAATSSSRLLQTGNGRRAIRLGKDHKPRETVESKDESLLCSHPMSEMSKYSMAKSEQSYQWEKQGLPSMLTTTSNSKMVRPTANRCKATMRKSKRQRLPQLRCQRHFIQVRKCHFCRSLPYREIWSSKEKYGNRPHRQQRSLRKRKSSIRYPYRKQSQQAGNCPKPLLAKILALHSECRHSKTQSGKKQRRNYSRCQISCTQQTKKLAYHQCEIRLYDIRNAGPHHRFTVSNKLVHNCGYGGAVGALKAMGAIDMGLGEQELQPLVDSWRQANPNIVLFWWDVDKAVKSAVKFQEQTETHGIQFTTSKGILFITLPSGRKLSYVKPKMGENKFGGESVTYEGSGTAKRWERLESYGPKFVENIIQAISRDILAYSMRQLSEFKIVGHVHDEVIIECEKDQSLEQIAMLMRKAPNWMPDINLRADGYECLFYQKD*	rep_hall_hmm	common_virus	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0043	shell	direct	high	2882	1.0	GCA_000463425.1_01241
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1190084	1190593	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	42825	43334	GCA_000463425_1_1_1206	GCA_000463425_1_1_1206	-	1991156	.	pfam13958	Toxin ToxN, type III toxin-antitoxin system. ToxN acts as a toxin, it is part of a type III toxin-antitoxin system. It acts as a ribosome independent endoribonuclease. It interacts with, and is inhibited by, the RNA antitoxin, ToxI. Three ToxN monomers bind to three ToxI monomers to create a trimeric ToxN-ToxI complex.	MHEMKFYQIDTNYLNILRQIDGRVPHNKEFIGRKGKSRPYIGVMLSIDNVDYFVPLSSKKKRSSFVVMPIYDDNDEQIATLMLNNMLPVPPKHRKLLNMDGVRITDPKYFDLLMNELNFLRPRRQAIKSRCTIIRSVKVEGKNKPQINEKTKEFCLNLLELEEAYKENE*	mmseqs_cdd	nonviral_gene	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0044	shell	direct	high	509	0.998	GCA_000463425.1_01242
GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote	cenote	CDS	1190800	1191396	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C84	43541	44137	GCA_000463425_1_1_1207	GCA_000463425_1_1_1207	-	1991156	.	.	hypothetical protein	MTNKDKIYNECQKQECSLEVGLLEGQVLAPMLVENQQVIEDMRLKRETLRSWMPAKQLNVYVLVAFIPVFPEEYDQTERIYKDAVENFLNEFRTRKSKNIEEIISYESWIDMDESTLYSSTEELEEFMFAEMLQDLLEKVRQVDKDLYDITLGLLAKEFDESIEDVFARIGVKRSTGFYRLPKARALVAALLKELNPK*	.	hypothetical_protein	C84	44137	1147260	1191397	GCA_000463425.1|CP003859.1@region_1147261_1191397@tool_cenote_CDS_0045	shell	direct	high	596	0.998	GCA_000463425.1_01243
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1240123	1240464	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	1	342	GCA_000463425_1_1_1251	GCA_000463425_1_1_1251	-	1991156	.	PF10066.9	Uncharacterized conserved protein (DUF2304)	MAIWFQIVLIFVSIMTCAFILRSIRKSQVQINDAIFWVFFSLILLVFSIFPSLAEAIASALGIVSAVNFIFLFVIFLLLINQFQLTIKLSKLDTKFKNLVQTIALREKDENKN*	hhsuite_tools	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0001	shell	direct	high	341	0.997	GCA_000463425.1_01286
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1240472	1241167	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	350	1045	GCA_000463425_1_1_1252	GCA_000463425_1_1_1252	-	1991156	.	cd04179	DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	MKSSDLLIIIPAYNEEGSIENVVKNIILNYSQYDYVIINDGSKDRTSAICHVNGYNIVDLPVNLGLAGAFQTGLQYAYEQGYKKAVQFDADGQHLPEYISVLEAKMNEGYEMVIGSRFVTEKRETSLRMMGNILISAAIKLTTGKTINDPTSGMRMFSEGLIKEFALNINYGPEPDTVSYLIRHGVKVAEAQVRMEERQAGESYLTLSRSIQYMTHMFVSILIIQNFRKRG*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0002	shell	direct	high	695	0.999	GCA_000463425.1_01287
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1241495	1241980	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	1373	1858	GCA_000463425_1_1_1253	GCA_000463425_1_1_1253	-	1991156	.	2PRX_B	Thioesterase superfamily protein	MTLETKNIAIQDTYGDRFQHCWGCGPKNESGLHLKTYPSLDGTSCISKITPALQYTGGVPANLFGGMIAMIFDCHGTASAAWFAHQNKGLDLTEKTVIGRFITARLEVDYKSPTPIDEEITVVSRLEELGERKVIVTMEMIVADQVRAKAKMVAVAVKDNM*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0003	persistent	direct	high	485	0.998	GCA_000463425.1_01288
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1242453	1242776	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	2331	2654	GCA_000463425_1_1_1254	GCA_000463425_1_1_1254	-	1991156	.	.	hypothetical protein	MYHAIHLIDNTDFLSTLDNPKSYNDAKGGNDKFEIWRDVYQQDYVTNGVLEANIKPFEIGQAKSSIADLKEIAHDEVQKNIINSQQFFVSIMLADVKMPSINSSISS*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0004	shell	direct	high	323	0.997	GCA_000463425.1_01289
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1243273	1243890	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	3151	3768	GCA_000463425_1_1_1255	GCA_000463425_1_1_1255	-	1991156	.	4LFK_B	Galactose-6-phosphate isomerase subunit A (E.C.5.3.1.26)	MRIGVIQASSQATKNQIIYDAVLKYAPKKSEVINFGCTMEENEKYSYIEISILVGILLASRTVDFVVTGCSSGQGMLLACNSMPDVICGYAPTPKDAYLFAQINSGNAISLPLGEDYTWSGTENLEKTIETLFSESFGQGYPKSEAERKIRDAEKLKEIRRIGQIQFEEFVNILDISFLESIKRKQDVIQNVKAYGKKEIADLMK*	hhsuite_tools	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0005	shell	direct	high	617	0.998	GCA_000463425.1_01290
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1243917	1244237	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	3795	4115	GCA_000463425_1_1_1256	GCA_000463425_1_1_1256	-	1991156	.	COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family [Transcription]. 	MASSKEYLNFILEQLSDLEEITYRSMMGEYIVYYRGKIVGGIYDDRFLVKPVKSALAYMPNAKYELPYDGAKEMLLVDDVDNKVFLTGLFNSMYDELPAPKLKKKK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0006	shell	direct	high	320	0.997	GCA_000463425.1_01291
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1244259	1244687	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	4137	4565	GCA_000463425_1_1_1257	GCA_000463425_1_1_1257	-	1991156	.	cd07251	uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	MNKITCICLGVKDMERSIKFYRDGLGYKTDCRENNPPVCFFDTPGTKFELFPLEQLAKDIDENNPPKGNGFSGITLAYNVEHKEDVDAVIAIVRKAGGKIIKEPQEVFWGGYHAYFSDLDGYCWEVAWGPNFKFDENGLLKF*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0007	shell	direct	high	428	0.998	GCA_000463425.1_01292
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1244714	1245331	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	4592	5209	GCA_000463425_1_1_1258	GCA_000463425_1_1_1258	-	1991156	.	COG4335	3-methyladenine DNA glycosylase AlkC [Replication, recombination and repair]. 	MKEYIASLEKEFSLIENGFKEEEKRAFADYKSNDNEHSKKMAFLAYKSNVYQVRMYGVFLFGYLSEQDDILAFMRDEVSKDDNWRVQEVLAKSFDEFCKKIGYEKALPVIDEWLKNNNPNTRRAVTEGLRIWTSRPYFKENPNEAIRRIAALKDDSSEYVRKSVGNSLRDISKKFPELIKEELDGWDINSKDIKQVYKLASKLIV*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0008	shell	direct	high	617	0.998	GCA_000463425.1_01293
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1245371	1245475	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	5249	5353	GCA_000463425_1_1_1259	GCA_000463425_1_1_1259	-	1991156	.	.	hypothetical protein	MIENNEEPLATALDHELVTKFAKEFMELYNGIYF*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0009	shell	direct	high	104	0.99	GCA_000463425.1_01294
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1245514	1245717	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	5392	5595	GCA_000463425_1_1_1260	GCA_000463425_1_1_1260	-	1991156	.	PFAM:PF11112.7	excisionase	MMEYLSIKQTSEKWGITVRRIQVLCTEGRIPGATKIGSYWAIPTDAEKPNDKRIKSGKYIKKGDING*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0010	shell	direct	high	203	0.995	GCA_000463425.1_01295
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1245843	1247414	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	5721	7292	GCA_000463425_1_1_1261	GCA_000463425_1_1_1261	-	1991156	.	PDB:4BQQ_A	Integrase	MNENVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNKEWELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRKLKEKNIAIIFEKENINTLEASGELLLTIMASLAQQESASLSQNIKLGLQFRYQEGKVQPNHEHFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWHLSTIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLVQEEMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCTRVEHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKLNGILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLKGENHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEVVR*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0011	shell	direct	high	1571	0.999	GCA_000463425.1_01296
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1247407	1247859	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	7285	7737	GCA_000463425_1_1_1262	GCA_000463425_1_1_1262	-	1991156	.	PDB:4BQQ_A	Integrase	MWAEFNRKVGKDMTHTPYGYRIENGIAVVDEVDAERIKALYQEYIDCKSMRAATKKAGIDKTHSVIGRILKNKVYLGTVYYPQIIDEDIFAKAQEIREHNVRSQNRIGIYRPHPKAEIGAFKIRKTEEKYKDPYKQAEYAYSQILEVANE*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0012	shell	direct	high	452	0.998	GCA_000463425.1_01297
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1247820	1249385	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	7698	9263	GCA_000463425_1_1_1263	GCA_000463425_1_1_1263	-	1991156	.	PDB:4BQQ_A	Integrase	MARITKIETTKSFVKERKIRVAAFTRVSTKSEEQLLSLEIQKEHYESYINANSSWEYAGLYYDEGISGTKIEKREGLLALLKDCEDGKIDRVITKSISRFSRNTTDCLEMVRKLTSLKVFLFFEKENIDTEHMSSELMLSILSSIAESESKSISQNSKWSIKNHFKAGTFIISYPPYGYENKDGKMNIVPKEADIVKEIFTMTINGMGTHLIARELNNRSIPSKKGDKWHGSTVRGILQNEKYTGDAIFQKTYTDDNYNRHINYGEENMYLYKNHHEPIISHEIFDKVAEVIKQRGREKSIEKGTGKYQSRYVFSGKIYCGECGATFKRRQHYKPSGDYVAWCCNRHITDKNACSMMYIRDEDIKTTFLRMIRKLQTVHDQVLKPFVMSLKGTNNKQRLKQVLALEEQIEKNAEQATVLTNLMSSGYIEPEVFHAENNQLTLEADRLARNKQLIVKSINGDLSHLDEAQKLLRFTSKKEVITEFNDALFLEYVDTIKVNNRNEITFALKCGLNLTERLVKI*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0013	shell	direct	high	1565	0.999	GCA_000463425.1_01298
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1249445	1249660	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	9323	9538	GCA_000463425_1_1_1264	GCA_000463425_1_1_1264	-	1991156	.	pfam20612	hypothetical protein	MHVTNSIPSSIDVSARKMTKEAMRKDFEYEIAQKLTQSLLEQGLISTEEYNKIKVLNIEKFSPFYKDLMDI*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0014	shell	direct	high	215	0.995	GCA_000463425.1_01299
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1249647	1250057	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	9525	9935	GCA_000463425_1_1_1265	GCA_000463425_1_1_1265	-	1991156	.	PFAM:PF05766.11	HNH-endonuclease	MNQDEKARIIELREEGLSYTEIAKRMDISKNTIKSFCRRNGITETKKDKGDLGVCEFCRKPISQPVGRKKKRFCSDSCRNKWWNSHMDEVDRKASYECVCRYCDKTFFSYGNKNRKYCSHQCYINDRFGGEENACN*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0015	shell	direct	high	410	0.998	GCA_000463425.1_01300
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1250241	1251227	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	10119	11105	GCA_000463425_1_1_1266	GCA_000463425_1_1_1266	-	1991156	.	PFAM:PF05382.12	peptidoglycan-hydrolase	MSNSSLVNMTMLSPNHSGHRNQPITKIAIHHTAGAISAATIGQIFRPTSRQAYCNYGIGNDNKIVLCVDEANRSWCTSSSWCDNRAVTIEVANSANGGNWPVSDRTLATLIDLVTDICRRNGIRNCTYTGGKDGVLQKHEWYANTNCPGPYLGSKFSYIASEVNKRLSGNSSSSGGTSTSSLYRVRKSWSDVKSQKGAFRDFDNAKKCANANAGYKVFDASGNEVYPNKVTISKSVDTLAHEVLAGNWGNGSDRANRLRAAGYDYDTVQNRVNEILSGTNSNPNRKPIDILAREVIIGDWGNGQDRVNRLTSAGYDYNAVQKRVNETL*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0016	shell	direct	high	986	0.999	GCA_000463425.1_01301
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1251220	1251639	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	11098	11517	GCA_000463425_1_1_1267	GCA_000463425_1_1_1267	-	1991156	.	PFAM:PF05105.11	Bacteriophage-holin	MKEFWSMIQLTFAGVGGWLGYFLGGCDGLILALLLFVVIDYITGVMCAITDKKLSSSVGFKGICRKVLIFMLVGIANIIDVQIIKSGSVLRTAVVFFYLSNEGLSLIENAAHLGLPVPDKLKAVLEQLHDKERGVKDHE*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0017	shell	direct	high	419	0.998	GCA_000463425.1_01302
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1251641	1252153	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	11519	12031	GCA_000463425_1_1_1268	GCA_000463425_1_1_1268	-	1991156	.	.	hypothetical protein	MAKKFLSKEGLDRFYEKIKSKFALLDSPVFKGRPTVETPEFERTTESKVIVNKEYVSKMYDLIVQYIESEKPAFHIQLNIKPNEWKKTEGVFKFERLKEKMQNVELDKVSIFVRIDTLRLEPKKLAGVLKYPLGITNELVIYTTSAPTYELPIIVDLFASMDMTMWLGGN*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0018	shell	direct	high	512	0.998	GCA_000463425.1_01303
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1252163	1252756	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	12041	12634	GCA_000463425_1_1_1269	GCA_000463425_1_1_1269	-	1991156	.	.	hypothetical protein	MATKYLDNNGLLYVWKKIKDTFVKKTELDEVKTAIPKNVTDLLDAGNYALKSSVPTKVENLEDAGDYAKKSEIPHRIDGMEGIEAYAKVASIPKKVVELEDYADFVKKAELTEEVKGLIGNVKSIEFSVVEELPASGEKATIYLVSNAKGDNDAYDEFIWLNDKLEKIGTTSVDLSGYLKAVDISSITNEEIDVFFV*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0019	shell	direct	high	593	0.998	GCA_000463425.1_01304
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1252771	1252983	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	12649	12861	GCA_000463425_1_1_1270	GCA_000463425_1_1_1270	-	1991156	.	.	hypothetical protein	MAEINASFKRDAPMDTSFETIIRVTDSGSSDYNSLVNQPKINEVKLIGNRSLEELGLNSITNIELEELLK*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0020	shell	direct	high	212	0.995	GCA_000463425.1_01305
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1252983	1253279	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	12861	13157	GCA_000463425_1_1_1271	GCA_000463425_1_1_1271	-	1991156	.	.	hypothetical protein	MHRGTTPINIFRTDVDLTNASVLFITYKQNGKVILEKSIDEVKIQNNIVSVYLSQKDTLLFMEGIVTIQIRAKFFDGSAIASSLIRTSTYEILKDGEI*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0021	shell	direct	high	296	0.997	GCA_000463425.1_01306
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1253291	1253572	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	13169	13450	GCA_000463425_1_1_1272	GCA_000463425_1_1_1272	-	1991156	.	.	hypothetical protein	MEKPTINYALAYQKFRGELNSHIAAMQQRIPIPTYMVEGILAGILADVRSAVISENSLEVDAYRENLDKYYENREKELNDEILKLKAKDEEKA*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0022	shell	direct	high	281	0.996	GCA_000463425.1_01307
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1253553	1253735	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	13431	13613	GCA_000463425_1_1_1273	GCA_000463425_1_1_1273	-	1991156	.	.	hypothetical protein	MPELIINTNDIIINEGTLKKDVVKKQKAKEDKNILLLEEINRKLDLILKDREEGHGETNY*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0023	shell	direct	high	182	0.995	GCA_000463425.1_01308
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1253745	1256555	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	13623	16433	GCA_000463425_1_1_1274	GCA_000463425_1_1_1274	-	1991156	.	PDB:3GS9_A	tail-protein	MDGNTIYYPSDGKAVLISSTLNLELNTAGSLSFICPPENPYYEKIYNRKSIVSVYRDEKEIFIGEVREQTKDLRGNKKVQCVGLLSYLADSIQPQMEYHDQTPYQLLSKFLKIHNEQVDDKKKIMLGRVTVTDPNNSLYRFTNYETTMEVIMTKIVDKLGGYLKLRREEELLYLDYLRLEEMGKATEQSIEFGVNLLDYTEDLSAEDITTAIIPLGKEIDGEENDILKKYTDIQSVNDGKNYLVSKEAKDEFGWVCRVIRWDDVTVPANLLRKGAAWLKDNQFEMVELALSAVDLSEFGIPTETIECGDRVRCIAYPFGMDRVFPVMKQTIPLQKPGEIKVVLGSNQAKGYIQSSADAVRHLKEENLVTRKIDNERVQSAIDNLKAQMNISEGGYKLTEYDSSGRWLRDLYMDTPDKNTATKVLQVNMNGIGGSHNGYEGPYAVGMTLDGMIYGNRIMSHSIDAEKLSVSYTSQVEKQILDSKTEAISDTDRKLKSYYTINEVNTRLSATDRKIEASVETVNQMLEQKNGNYYGTYEPNSSRAPANSWNSDVVRKNHVGDFFYDTTTGYAYRYIMKKQGLELKFNASSRTESEYYDWVEIFYEFDGKIYVFPRYGGTSIAGQIVFIPSDKFWLYWRCDGSGHDYYGFKIDYIKKVDSYKELIGDVSSLPTDAGEIINLSGSNYPESEHSPYKDGTRMLWKYSSSESISSSISFEWVRVKDKDIQAAKEKAETAISKISVVEGSISSMVKKGEFGTFMRQNYNSFLLGFNSASSYVQITAGEIGLYNGTIDSSHKRASFDENGNHFYRDGKYIGKIGTNVWSANSSHKGLVFDLDSEGKYMAFSQQEYTNSGSYTTMLCFSRSGSIYSDYGIHLGCNFYAHGFKIVDPQWRDGFGVNATINFVQILSMNSNGTVASWGPNGRMVFKDGILMDLNYYE*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0024	shell	direct	high	2810	1.0	GCA_000463425.1_01309
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1256571	1257245	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	16449	17123	GCA_000463425_1_1_1275	GCA_000463425_1_1_1275	-	1991156	.	PDB:2X8K_C	Distal-Tail-Protein	MYGMKIGEFHSYKDFGLVPTSKPIINLPSPKLEYLDIPGMQGELDITESLGGEVLYEMRTGSFEFLVSDPEKWREVYGKLLSTVHGKKTNIVLDTEKDYVYQGRMWVSEFKSDKNYSLITLDYKLEPYKYKISDLVNGVEIIHKLEGVVITNSKTVTIPFDSDMSIVPEFNNKTENIVTLNFKGKKFSIKKGINRFPEVRERKDLVLSLTGNSTIDISYKRGWL*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0025	shell	direct	high	674	0.999	GCA_000463425.1_01310
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1257248	1260061	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	17126	19939	GCA_000463425_1_1_1276	GCA_000463425_1_1_1276	-	1991156	.	UniProtKB:A0A0R1V141_9LACO	Minor-tail-protein-	MANRIKGITVEIGGDTTGLDKALKGVNSTIKNTQSQLRDVNRLLKLDPSNAKLLAQKQQLLQKEISETSEKLNALKEADKQAKVQLENGELGQDKYDALQREIIETENNLKALQEEAKKVPSALSVSMKEAGDKIKEVGDKTTEVGKGLSTHVTAPIVAIGAASLSAFNEVDKGMDIIVQKTGASGKALKEMQDSMKNLATSIPTDFETAGAAIGEVNTRFGLTGQKLEELSGKFIKFAQLNNIDVSSAIDNTQKVISAFGLKAEDAGALLDTMNAVGQRTGISMDTLAKSMVTNSAALQQLGFSASDAANFLGNVEMSGADTSQVMTGLSKALSNATANGKPMKEALKDIQDSMVNAKSDTEGLDAAIDLFGKKAGPAIYQACKNGSLSFEELGTSLKDNLGNVDSTFNETLDPIDKFKTSMNSLKIVGADVGNSLMTVLQPMLEKFAEIMKSLNEKWNSLSPGMQQAIVKIALIAATVGPVLVVIGKVITAVGTITSALGGLIGLLGGTATATTAVGVAGGASAAGTAAAGTAAGGAAVGFGALNVSLLPIIAIIAAVVAIIAIIKNWGAITEWFKGLWEKISTAIMSIWQGISDFFKGIWEGLVSIFTTVWETIKNIVTVALMFIVELIKGYFELITLPFRFIWENCKETIMTVWEAIKTVVSTVLNTISQVITSIMNAIKTVIITVWNAIKVVITTVINAILSVITTIFNNIKNVVTTVWNAIKSVISMVVDGIKNKISAVFDAVSSTVSSIFNGIKNTAVSIWNGIKSAIVTPIEEAKNKVKSMVDAIKGFFSSIRLKLPHIKLPHFSISGHFSLAPPSVPHLSIDWYKKAMNKPMLLNGATIFGSKGGHLLGGGEAGPEVIMGLDTLSNMTAGANGELLSVMTRVLAIMDRYFPQFAQTSIVLDSGELVGGIAPKIDMELYKLQNRKARGW*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0026	shell	direct	high	2813	1.0	GCA_000463425.1_01311
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1260164	1260580	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	20042	20458	GCA_000463425_1_1_1277	GCA_000463425_1_1_1277	-	1991156	.	pfam11208	Protein of unknown function (DUF2992). This bacterial family of proteins has no known function. However, the cis-regulatory yjdF motif, just upstream from the gene encoding the proteins for this family, is a small non-coding RNA, Rfam:RF01764. The yjdF motif is found in many Firmicutes, including Bacillus subtilis. In most cases, it resides in potential 5' UTRs of homologs of the yjdF gene whose function is unknown. However, in Streptococcus thermophilus, a yjdF RNA motif is associated with an operon whose protein products synthesize nicotinamide adenine dinucleotide (NAD+). Also, the S. thermophilus yjdF RNA lacks typical yjdF motif consensus features downstream of and including the P4 stem. Thus, if yjdF RNAs are riboswitch aptamers, the S. thermophilus RNAs might sense a distinct compound that structurally resembles the ligand bound by other yjdF RNAs. On the ohter hand, perhaps these RNAs have an alternative solution forming a similar binding site, as is observed with some SAM riboswitches.	MYKISGKLTVYFENPFWVAVFEHIEDGLLSVSKVTLGAEPKDYEIYEFVLNHYNDLQFSSAVATVVKEEKKNHKRVQRELKKQAKEIGIGTKSQNVLKLQQEQNKQERKSINRAKKIAEKDRIFELKQQKKKEKHKGH*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0027	shell	direct	high	416	0.998	GCA_000463425.1_01312
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1260788	1260952	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	20666	20830	GCA_000463425_1_1_1278	GCA_000463425_1_1_1278	-	1991156	.	.	hypothetical protein	MTTALFILRCVEIGINISELDLLTIGMVLDIWTEKSNDGVKYSKVAGQAEFDKF*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0028	shell	direct	high	164	0.994	GCA_000463425.1_01314
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1260960	1261313	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	20838	21191	GCA_000463425_1_1_1279	GCA_000463425_1_1_1279	-	1991156	.	PFAM:PF12363.7	Tail-assembly-chaperone	MLEKTVRVGEVDVKFRSSATIPRLYRIKFKRDIFKDLSKLEKTFKASEGSFEIDDLEIFENVAYIMAYHADRSIAGNIDDWLDQFEMFSIYEILPEILELWGANLETEVQSKKTSKK*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0029	shell	direct	high	353	0.997	GCA_000463425.1_01315
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1261325	1261915	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	21203	21793	GCA_000463425_1_1_1280	GCA_000463425_1_1_1280	-	1991156	.	PFAM:PF04630.11	tail-tube-protein	MGNKVKYNLKNVHAAKLKKDTSGAFTYENPKAIPGAVSISLDAEGESSPFYADGIVYFRSTANNGYSGDLEIALIPEWFRTEILKEELDRNGVLVEKANISETEKFALLFEFDGDINAIRHVLYNCSASRPSIESETKEDTIEPGTETLSLTADPREDGLVKSRTGDTTSADTYANWYKNVYVPQAKGEAPKPTGH*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0030	shell	direct	high	590	0.998	GCA_000463425.1_01316
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1261905	1262237	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	21783	22115	GCA_000463425_1_1_1281	GCA_000463425_1_1_1281	-	1991156	.	PFAM:PF05657.10	tail-completion-protein	MDKLLEIIEKIGFPSAYHHFAEGESPNPPFLIYILPASDNFSADGRVYFKANEVHIEVYTDYKNLDIEKKVEVVLDEYGIFYNKSEVYIESEKLYEVLYIFEMEVKTNGK*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0031	shell	direct	high	332	0.997	GCA_000463425.1_01317
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1262230	1262610	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	22108	22488	GCA_000463425_1_1_1282	GCA_000463425_1_1_1282	-	1991156	.	PFAM:PF04883.11	putative-tail-component	MSNVKIDSLSSEVMKELEKYADVTTEKVKKSVQNAGKTVRDEISRNAPSDTGKYSKSWKIKTVRETSNSLELVVHSKNRYQLTHLLEFGHAKCGGGRVSARPHIVNAEEKAIKVFEEEIKEAISNG*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0032	shell	direct	high	380	0.997	GCA_000463425.1_01318
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1262607	1262939	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	22485	22817	GCA_000463425_1_1_1283	GCA_000463425_1_1_1283	-	1991156	.	PDB:2KZ4_A	Head-tail-adaptor	MKVSLLNERITIEKSKIEVDKIGNHKNVWSKYYSCYATISSESPQEETSSGAIWDESKIDFTIRYSREVADISSIGFRVIFHNSIYEIRGIDHMNYKKKSMKLHCRRVER*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0033	shell	direct	high	332	0.997	GCA_000463425.1_01319
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1262939	1263217	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	22817	23095	GCA_000463425_1_1_1284	GCA_000463425_1_1_1284	-	1991156	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MVVSLEEMKNYLRVDTSEDDNLISTLIKSAEKMCLAIARKEEEEIIKENFDEYKVAVLYGAAYLYEHREEADHHELTITLRSMLFGARKAGF*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0034	shell	direct	high	278	0.996	GCA_000463425.1_01320
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1263240	1264415	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	23118	24293	GCA_000463425_1_1_1285	GCA_000463425_1_1_1285	-	1991156	.	PFAM:PF06673.10	Major-Capsid-protein	MSKILEMIEKRNKAWEGAKAFLDSKRDKDGLISEEDALVYDEMEKKVHNFSLEIERLQKMEELDKELSKPMSDAIVNRPMKVEEREEKKGRARDEYKNAMLNALRTNFKRVENVLQEGVDADGGYLVPDEYDDRLIETLEEENIMRSLGTTITTSGQHKINIAMSDPAAAWIEEGGALNFGDSKFAQVLLDAHKLHVAIKVTEELLYDNAFKLEDHILTAFGKALANAEEDAFLNGDGTGKPTGIFNKTNGGTYLKDITAVKSDDLIDLIHALKRPYRKNATFIMNDKTIAQVRKLKDNNGAYIWQPSYQEGEPDRILGYPVKTSAFAPENAIAFGDFSYYNIGDRGARSFKELTELFAGNGMIGFVAKERVDGKLVLKEAVQILPIKATS*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0035	shell	direct	high	1175	0.999	GCA_000463425.1_01321
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1264422	1265129	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	24300	25007	GCA_000463425_1_1_1286	GCA_000463425_1_1_1286	-	1991156	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MKNQNEEEVIERILFLNGTIAEESWFDDDVTPQIFKDELNKGNGNITVWINSPGGDCVAAAQIYNMLIDYKGDVTVKIDGIAASAASVIAMAGTKVLMSPVSMLMIHNPMTIAFGNKGEMEKAIDMLDEVKESIINAYEIKTGLSRAKLSHLMDSETWMDANKAVELGFADDILKRSEANDMEIPRISMMYQEAQVVNSLMDKLATKCKIENKETNTGVKADSLMERLFLMKNWR*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0036	shell	direct	high	707	0.999	GCA_000463425.1_01322
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1265080	1266426	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	24958	26304	GCA_000463425_1_1_1287	GCA_000463425_1_1_1287	-	1991156	.	PFAM:PF06074.12	Portal	MGILSSLFTLKGTRKSRDKPTNRTNGSAYSFLMGGSSSGRRVNERSAMQMTAVYSCVRILSEAVASLPLHVYLRTDTGTEKAIEHPLYKVLHDEPNPEMTSFVFRETMMTHLLLWGNAYAQIIRNGKGEVLGLYPLMPDRMKVDRDDKGKICYEYFVSDSDAGTEKQGIVKLNESDVLHIPGLGFDGLVGYSPIAMAKNAIGMAIATEEYGAKFFANGATPSGILEYPGTVKDPEAMRESWSKGFSGGNSHKIAILEEGMKYTPISISPNEAQFLETRKFQINEIARIFRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVARWEQSIVRRLFNEEEKKKYYVKFNVDGLLRGDYQSRMNGYAIGRQNGWMSAKDIRELENLDRIPSEDGGDLYLINGNMLTLNRAGAFAGDEGEEEEPNEEVLEVEESSNEKPKRRGSDRTHPIP*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0037	shell	direct	high	1346	0.999	GCA_000463425.1_01323
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1266528	1267253	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	26406	27131	GCA_000463425_1_1_1288	GCA_000463425_1_1_1288	-	1991156	.	cd01106	Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an  N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	MKTIKEVSKIAGISVRTLQYYDNIGLLKPTAHSDAGYRLYSDSELITLQHILLFRELEFPLKEIKEIINSENFDKDIALEQQINLLTLKKERLENLILFAKGIKLLGVDYMNFTAFDTKKIDEYAKQAKESWGNTKEFKEFEKKQKNRSDEEIKMINQQLMMIFAEFGKIKLEKYESEEAQNLVKKLQNFITDNFYNCSYEILSGLGKMYASGGDFTKNIDEFAGEGTAVFVNKAIEYYCK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0038	shell	direct	high	725	0.999	GCA_000463425.1_01324
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1267340	1268962	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	27218	28840	GCA_000463425_1_1_1289	GCA_000463425_1_1_1289	-	1991156	.	PDB:6Z6D_A	Large-Terminase	MRLFLEGGVALAKYKTTKFKEKDSVYNKEHADYAVNFIECLSHTKGTWAGKPFKLLPWQEQIIRDLFGVIKPNGYRQFNTAYIEIPKKMGKSELAAAVALLLCCGDGEERAEVYGCAADRQQATIVFDVAADMVRMCPALNKRVKILASQKRIVFQPTNSFYQVLSAEAYSKHGFNIHGVVFDELHTQPNRKLFDVMTKGSGDARTQPLYFLITTAGTDTHSICYETHQKAKDILEGRKIDPTFYPVIYGADEGDDWTDPKVWKKVNPSLGVTVGIDKVKAACESAKQNPGEENSFRQLRLNQWVKQAIRWMPMEKWDSCSFAVNEDELEGRVCYGGLDLSSTTDITAFVLVFPPTDEEDKFVILPYFWLPEETLELRVKRDHVPYDIWERQGYIQTTEGNVVHYGYIESFIEKLGERFNIREIAFDRWGAVQMVQNLENMGFTVVPFGQGFKDMSPPTKELMKLTLEQKIAHGGHPVLRWNMDNIFIRTDPAGNIKADKEKSTEKIDGAIATIMALDRAIRCGNVNTESVYDSRGILFM*	hallmark_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0039	shell	direct	moderate	1593	0.982	GCA_000463425.1_01325
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1269102	1269380	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	28980	29258	GCA_000463425_1_1_1290	GCA_000463425_1_1_1290	-	1991156	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MNKMTELAKEYRIPTQATPEDLETRWGKVIIFGDRVILVGHYYHPDGNCYFAAVYEFLDDDHTCEGFIGLREVSDKRFEDDGHAIEWALNQN*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0040	shell	direct	high	278	0.996	GCA_000463425.1_01326
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1269468	1269641	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	29346	29519	GCA_000463425_1_1_1291	GCA_000463425_1_1_1291	-	1991156	.	PF16468.5	Domain of unknown function (DUF5049)	MNDKIKEQILVIRNTGITNMFDLIAVQRIAFEMGFYELVDFLETDRKAYVDFIIYGK*	hhsuite_tools	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0041	shell	direct	high	173	0.994	GCA_000463425.1_01327
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1269631	1269861	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	29509	29739	GCA_000463425_1_1_1292	GCA_000463425_1_1_1292	-	1991156	.	PF14192.6	Domain of unknown function (DUF4314)	MRFPSRDIVEGIRKRYPIGTRVELVLMADIQAPPVGTKGTVRGVDDIGSIMVSWDNGSSLSVAYGEDFCRRISDER*	hhsuite_tools	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0042	shell	direct	high	230	0.996	GCA_000463425.1_01328
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1269845	1270495	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	29723	30373	GCA_000463425_1_1_1293	GCA_000463425_1_1_1293	-	1991156	.	PFAM:PF12224.7	amidoligase-enzyme	MELKYEMKGAERKKLVQAIEDLTGYKAKYLGMPSAAYEIGAFTVSKEGTVTSKTDENLEDLEKILAGDYGIDLPQRETVATQGLTVAIPRDKVNLSKLEKIFENKGDLIKKALGVTSLEIEEDEEKVSFPWFENIDNEHLMTYTKFIAALCKLSINAKRINESSKEVINEKYAFRCFLLRLGFIGYEFKQDRKILLEKLSGSSAFRNGGHKDEISK*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0043	shell	direct	high	650	0.998	GCA_000463425.1_01329
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1270531	1272048	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	30409	31926	GCA_000463425_1_1_1294	GCA_000463425_1_1_1294	-	1991156	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MSKELTLGSLFDGSGGFPLGAKLLGIKPIWASEIESFPIRVTTKRMPEVKHLGDVSEIKGYEIEPVNIITFGSPCQDMSIAGKRAGLNGSRSNLFYEAIRIIKEMRERTNGTKPRYIIWENVPGAFSSNKGEDFKKVLKEICEIKGYQIDAPRPNRWQNAGLILADDFSLAWRVFDTQHWGVPQRRRRIYLVTDFNGESAGKILFESEGMPWHLEKSKCPWKRTTGNSKTCTRKGIENLCLNDQGGQRMDIHENKSGTITASVGNHPPLVFENHGQDTRFKGPIDISNTLGASLGTGGNNQPFVVEDKVDIFDVRITSENTKNHRANIYETDVARTINMGLNSPDANQGGLAIVYSTSKNSHHTEAVENLANTLVASDYKDPPVVNDMEGKKYIVRRLTPKECGRLQGFPDGWCDGLETENPSSEELKFWSEVFETYRRVVTKSTKPKSEKQIRKWLINPHTDSAEYKMWGNGVALPNVCFVLAGIAHFYFEKSTEMTCYLQPLE*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0044	shell	direct	high	1517	0.999	GCA_000463425.1_01330
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1272041	1273276	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	31919	33154	GCA_000463425_1_1_1295	GCA_000463425_1_1_1295	-	1991156	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MGKEMQYYLADINDLIPYIRNARTHSESQIAQIAASIKEFGFLSPILIAEDNTILAGHGRLAAARKLGLKQVPCVKESHLTETQRRAYIIADNKLSLNAGWDEDILAIELSELQGADFDLDLLGFDESELASIFEDDKEVEDDDFDVEEELNKPCFSKAGDIWTLGRHRLICGDSTKEETYKSLMEDKKANLVVTDPPYNVNYEGSAGKIKNDNMNTDKFYNFLLDAFSNMEKVMADDASIYVFHADTEGLNFRKAFNDAGFYLSGCCIWKKPSLVLGRSPYQWQHEPCLYAWKKKGKHQWYSGRKETTIWEFEKSKKNADHPTMKPIALLAYPITNSSMSNTLILDPFGGSGSTLIACEQTDRSCYTIELDEKFCDVIVKRYIEQVGTNKDVSVLRAGKEYLYNEVTADE*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0045	shell	direct	high	1235	0.999	GCA_000463425.1_01331
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1273289	1274071	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	33167	33949	GCA_000463425_1_1_1296	GCA_000463425_1_1_1296	-	1991156	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MIEKVNPMHPDKIADRIAGAIVDLAYKENKNPKIAVEVLIGHSVCHVIIETTEKLYQEPIEKIIHRIAGDVKADILIVPQDVYLTNNQKNKVRCGDNGIFKGMPLTDEQKELSKIAREIYNKYPYDGKYILDETRLIICQSNAKTSELRETYPYAEVNPLGDWTGGTDVDTGATNRKLGSDMADSVTGGGLHGKDLSKADVSVNIYAFLKAQEMGEEVKLCCAIGDREVDGKSYEDIVRLAKEYIDSIGGFEKFAEWGLF*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0046	shell	direct	high	782	0.999	GCA_000463425.1_01332
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1274075	1274719	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	33953	34597	GCA_000463425_1_1_1297	GCA_000463425_1_1_1297	-	1991156	.	PFAM:PF05119.11	terminase-small-subunit	MGSHAQKERFKQGIKESKNLRSDNLAKDGTYRGGRRVRAGDKPKPVAEKIQAGEMVKILANDIPDEYYAELESVDLPEGVELEGMDMPKPSEYLSAKQKSGIPLGADRIYKETWQWLKERKCEKLVNKRLIESYSQAFARYIQCEEAISRYGMLGKHPTTGGVIASPFIQMSSQFQKTANLIWYEIYDIVKQNCTEIFEEESNDPMERLLRGGR*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0047	shell	direct	moderate	573	0.888	GCA_000463425.1_01333
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1275240	1275740	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	35118	35618	GCA_000463425_1_1_1298	GCA_000463425_1_1_1298	-	1991156	.	PFAM:PF05263.10	transcriptional-regulator	MENLPQMEVRMDKKEYLKQHRLLNRIIELDLEELKRIRELSVSVSSIAFDRDYIQTTRNTRAPFEKWLDKINILEIKIANEVNLFMDLKLQILETIEQLECIDEKLVLNYRYVKGLEWDEISSLLFASERTIFRWHGNALAKLKLPENPINIKSCQLMAVDGSDCQ*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0048	shell	direct	moderate	471	0.94	GCA_000463425.1_01334
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1275758	1277101	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	35636	36979	GCA_000463425_1_1_1299	GCA_000463425_1_1_1299	-	1991156	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MKYFPHDYQRYATDFIINNPISAVLLEMGLGKSVISLSAINELMLDYFDVSRTLVIAPLRVANSTWPDEIKKWDHLKHLNYSVVIGSEKERLDALKKPAHIYLINRENVDWLITKSGISWKFDMVVIDELSSFKSYQAKRFKSLLKVRPKIKRIVGLTGTPSSNGLMDLWAEFRLLDMGERLGRYITYYRQNFFVPDKRNQQMIFSYKPRDGAEKKIYSLISDITISMKSKDFLKMPECLMNEVIVTLSDKEQKLYDSLKQDMVLSLEENEIDAINAAALSNKLLQMSNGAVYNDDKESLHIHDRKLDALEDLIEGANGKPVLVAYWFKHDLEKIKDRFDVREIKSAKDISDWNKGKIPVALIHPASAGHGLNLQAGGSTLIWFGLTWSLELYQQTNARLYRQGQDSTVVIHHILTKGTIDEDVMKALKSKKKIQDALIDSVKARLK*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0049	shell	direct	high	1343	0.999	GCA_000463425.1_01335
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1277082	1277363	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	36960	37241	GCA_000463425_1_1_1300	GCA_000463425_1_1_1300	-	1991156	.	PDB:4QBL_E	Nuclease	MLEKEIEKSLVKRVKGLGGICLKLVSPSMDGLPDRMVFLSDGKFAFVELKAKGKKPRPLQMKRIDDFRKLGFKCFVIDGKNQIGGVIDEILSS*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0050	shell	direct	high	281	0.996	GCA_000463425.1_01336
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1277486	1279312	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	37364	39190	GCA_000463425_1_1_1301	GCA_000463425_1_1_1301	-	1991156	.	PFAM:PF04735.11	dsDNA-helicase	MFSYFDDNALDAARFLYGTSTPEVELYEGSRTILDFLLDDSFANLGESIESGNRNNTMSHIAGKLIKRFGDGNEAYEKFMKQADRCDPPLSEDELSTIWNSARKFGNKVSSQVGYISPEKYNLELNLKPEDLSDVGQAVVLAREYKDKLRYSPATDFLVYNGSFWEESQPNAQGIAQELTARQLEEAEVEIQKAITEMNSNGAWALIAAMGPKKASAQFNKEQARSFEKYEQAEVYRKYAIKRRDTKYISAALKEVRPMVQVEQSMLDADEFLLNTPYETINLVTGECLVHKAEDYITKQTTVSLGEEGKDIWLDALNIFFVDDIELISYVQKIVGLASIGKVYVEALIIAYGEGRNGKSTFWNVVSKVLGTYSGNMSADMLTVGCRRNVKPELAEAKGKRLLIAAELEEGMRMNTSNVKQLCSTDEIFAEKKFKSPFSYVPSHTLVLYTNHLPRVGAVDKGTWRRLIVIPFDAKIEGQNDIKNYTEYLFENAGGAILSWIIEGAKQVIKDEYHIDAPKRVQDAIAAYKENNDWMKHFLDECCEIDPTFTEKSGKLYTAYRAYCLRTGEFTRSAGDFYSVLEIENFQKKKTKKGIIVYGLRLKSEFED*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0051	shell	direct	high	1826	0.999	GCA_000463425.1_01337
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1279282	1279719	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	39160	39597	GCA_000463425_1_1_1302	GCA_000463425_1_1_1302	-	1991156	.	PFAM:PF04735.11	dsDNA-helicase	MLKCRLSVATCIGNSSNCMYPNSVMVSDRDSFIQAISFDHVAGTFKGNYRSKDNFISSDCIPMDCDNDHSDGEKDWVTPFDVAMAFPGVCFYASYSRNHMKNKGSKSARPRFHVYFPIEEVTDADEYAEYKKRYKQCFHTLMIML*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0052	shell	direct	high	437	0.998	GCA_000463425.1_01338
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1279712	1280083	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	39590	39961	GCA_000463425_1_1_1303	GCA_000463425_1_1_1303	-	1991156	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MSKTYKKHLENPNFRPLAYICAPYSGDKDRNIKKAIHYAELAYRNGAIPVTPHLLFPFMNDKDTNQREDALFMDIILLGKCQEVWVFGGEITEGMKKELEIAEKRKQVIKYFDSTSMEVEINA*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0053	shell	direct	high	371	0.997	GCA_000463425.1_01339
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1280076	1280750	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	39954	40628	GCA_000463425_1_1_1304	GCA_000463425_1_1_1304	-	1991156	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MKAMIPMNDYGILADKNNTARVDSRFIAQFFEKRHSHVIRDIQSITEPKSGLSKEFTKLNFELSSYKDSTGRKLPCYLLTRDGFTILAMGYTGPKAMKFKELYIKKFNEMEDFITTIISAREMFPILTENIALIHDNPKAYHYSNECDMINRLVLGMSAKQVRELYGIEKGKSIRPYLTSGQMYLIDRLQKIDAGLLISTPDYQARKRQLEWYLTKISKEADYE*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0054	shell	direct	high	674	0.999	GCA_000463425.1_01340
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1280725	1280871	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	40603	40749	GCA_000463425_1_1_1305	GCA_000463425_1_1_1305	-	1991156	.	.	hypothetical protein	MTIEEKIAYLETMDKVKDQQIKELQVAVEGLVKSLEGGVSHEGNDSNE*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0055	shell	direct	high	146	0.993	GCA_000463425.1_01341
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1280964	1281521	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	40842	41399	GCA_000463425_1_1_1306	GCA_000463425_1_1_1306	-	1991156	.	CDD:cd08642	DNA-Polymerase-I	MGALEMGLEEDELQPLVDAWRSSNPKVTSLWWDVDRAVKTCVKERINTETHGINFSYKSGFLFIELPSGRKLAYVKPRMGENKFGGESVTYEGVGTTKKWERLESYGPKFVENIIQGIARDILVYAMKTLRNCEIVAHVHDEIIIEADKRMSLEVVCEQMGRTPPWASGLILRADGYECEFYKKD*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0056	shell	direct	moderate	543	0.973	GCA_000463425.1_01342
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1281582	1282952	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	41460	42830	GCA_000463425_1_1_1307	GCA_000463425_1_1_1307	-	1991156	.	CDD:cd08642	DNA-Polymerase-I	MKNISVDIESYSGVNLQKAGVYKYVESNDFEILLFGYSIDGGEVQVVDIAKGEEIPRDILDALTDEEVTKWAFNAQFERVCLSRYLVDKGISLNPFLDHHPSSTTKARFLSPTSWKCTMIWSATLALPMSLEGVGSVLGLDKQKLSEGKSLIKYFCLPCNPTKVNAGRTRNQYFHDEVKWNQFKEYNKRDVEVEMAIQERLSKFKVSEDIWDEFYLDQEINDRGIAVDPVLVESAIRLDLDVKENLMKKLSDITGLENPNSVLQMRQWLSKNGLEMESLGKKEVARELKTASKKLAEVLLLRQQLSKSSVKKYTAMENAACKDNRERGMFRFYGANRTGRFAGRLVQLQNLPQNHLPDLAEARELVRQGNITALELLYEDIPDTLSQLIRTAFVPQSNNKFIVADFSAIEARVLAWLAGEKWRMKVFEEGKDIYCSSASQMFGVTVEKHGVNSQLR*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0057	shell	direct	high	1370	0.999	GCA_000463425.1_01343
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1283009	1283125	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	42887	43003	GCA_000463425_1_1_1308	GCA_000463425_1_1_1308	-	1991156	.	.	hypothetical protein	MSLIDVFLAIFIGTLLFDFVAKTVVSLYMDIKAQLRKK*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0058	shell	direct	high	116	0.991	GCA_000463425.1_01344
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1283112	1283258	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	42990	43136	GCA_000463425_1_1_1309	GCA_000463425_1_1_1309	-	1991156	.	.	hypothetical protein	MTQMQNFMLEVCFGATLGLIIGSWGFMIKCWLDDRKKKKTEEKNNESN*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0059	shell	direct	high	146	0.993	GCA_000463425.1_01345
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1283269	1283814	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	43147	43692	GCA_000463425_1_1_1310	GCA_000463425_1_1_1310	-	1991156	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MTNNKTKVITGKDTRLSYFNGWEPKSINGGPEKYSVSVLIPKDDVKTIKAIEEAIDAAIEEGVGKFGGKKPNKAAIKLPLRDGDIERDDEAYKGHYFINANSTSAPQIVDKVVKPILDRSEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRDGEPLGGKVNAADEFTSLEDDDFLA*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0060	shell	direct	high	545	0.998	GCA_000463425.1_01346
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1283816	1284991	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	43694	44869	GCA_000463425_1_1_1311	GCA_000463425_1_1_1311	-	1991156	.	pfam10926	Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	MTKQKVNCITGAREAGQGHAVLSPSSSHRWLNCTPSAVLELEFENTSSSAAEEGTAAHTFCEHKLKKALYMRSKRPVSDYDSDEMQECTDAYVDYVMEQLEIAKQVCKDPIILIEQKVDFSEYVPDGFGTADCLIVSDETLHIIDFKYGLGVLVDAYENPQMKCYALGALAIYESLFDIKEISMTIFQPRRENISTYTIFTSELKKWAEEVLKPKAEMAIKGEGEYCSGEWCKFCRASVRCRARAEDKLKLAKEEFKLPPLLTDEEIEEILSIIPDLTKWANEIMNYATESAVNHGKKWTGFKIVEGRSVRKYKDENAVIEKAKEHGYTDIFKSSLITLTEMQKLMGKAKFEEVLGDLIIKPSGKPTLVPESDKRKAMNISNINDEFMEEK*	mmseqs_cdd	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0061	shell	direct	high	1175	0.999	GCA_000463425.1_01347
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1284984	1285277	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	44862	45155	GCA_000463425_1_1_1312	GCA_000463425_1_1_1312	-	1991156	.	.	hypothetical protein	MKKEFVELVVKDLEMLISHLKELLVDEEDGKVEKPRAEPSKKIGLEDVRAVLAKLSQHGKTAEVKDLLTKYGATKLSDVDEGKYKDLLKDAEGIEID*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0062	shell	direct	high	293	0.997	GCA_000463425.1_01348
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1285274	1285471	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	45152	45349	GCA_000463425_1_1_1313	GCA_000463425_1_1_1313	-	1991156	.	.	hypothetical protein	MKHKVVINVTDDKGDKTKVLRGAQMWLPRRLIKWLFGEYTQVYLLEPGKTVESVDVKEIMKGESL*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0063	shell	direct	high	197	0.995	GCA_000463425.1_01349
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1285557	1286168	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	45435	46046	GCA_000463425_1_1_1314	GCA_000463425_1_1_1314	-	1991156	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MRIHKTNQKDRSVYNYKTTVRTEKGEYVEKTMTLKPGEYGVTELDIKMLHSMDDSEVYYNLKNARPERTKEEKAEIEVWKQKFISDFTKRYGYEPNKYIIEDAVNDAFPRNYNLSLDFDADGDIDPDKRLIASISDKESDEMFEWSERMEEVLSLLTDKQRLVINLMFVEGYKQSEIADLMSISSAAVKKHLDKAKEIIKNNF*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0064	shell	direct	high	611	0.998	GCA_000463425.1_01350
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1286450	1287364	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	46328	47242	GCA_000463425_1_1_1315	GCA_000463425_1_1_1315	+	1991156	.	.	hypothetical protein	MNNTYPRLCGGTFLVLLLRAKRTKAKKDIRKFSANGITNPEFLKGLITIFDSSYYEPSGSSLETNTSRYKKCEISKADCLPFDDNALITAFDRQIKEDYYTTLVKMKELLDYFLTIDKAPKIDELVYGILNLIKDDQSINQDAIFYTLPNGKGITKIDLLSTLNINFYSLVLGVWHFILTNRKDNKIGASTIKSWHEEPLEKGEAHIFTSSIGSTYHLDIKISTLIEQNESAEREISDEVNKDFFEEPEIEILCSVDTNETSTHQENKQPTINNQFIFNQSGSGVNIGQATNVIIKNGKVVDAE*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0065	shell	direct	high	914	0.999	GCA_000463425.1_01351
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1287361	1288035	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	47239	47913	GCA_000463425_1_1_1316	GCA_000463425_1_1_1316	+	1991156	.	.	hypothetical protein	MNNDLDIAKTESTLPSEKTNTYKFEQSGQGTNIGLAQNVHNTTVNIMLPSSNNMIGAPTYIQKTINMEYFNLFVILGEQYDKPYFVVDIKRALTVVEGTAKSIHDKLASFSEEAKVEIMSYPCIFANENYRYSPPETTPSVPQMAQYGFITKIQQLHNGDLKIYFQSLTMCPIPQDLLSSMVTELDLQGNDTFNEFDRTHWSIKNVNIVEELKLKGISLLIPSI*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0066	shell	direct	high	674	0.999	GCA_000463425.1_01352
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1288051	1288245	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	47929	48123	GCA_000463425_1_1_1317	GCA_000463425_1_1_1317	+	1991156	.	pfam12728	Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	MAELNQETEKWVNLEDIADHLSVSKDTIRIWIKDGKLPFYKAGKMYKFKISEVDEWVRKGRITE*	mmseqs_cdd	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0067	shell	direct	high	194	0.995	GCA_000463425.1_01353
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1288263	1290524	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	48141	50402	GCA_000463425_1_1_1318	GCA_000463425_1_1_1318	+	1991156	.	pfam13166	AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	MNEKITSAITKVSLNQATFLNKSFTPSYINFLFGKNGCGKSTVAKVLKDKTDMVWDTGHSSNDYLMLVYNEDFINKNIASYSGMPGVFTISEQNAQIQKDIEDATAELGIAQTTLKNASESLSKQEILLNKQQDTFQTICWEKTKDFRKSVDVALAGKKTKDGLTKALLSETNPTEFNSDSLIAMCEAAFSNDATIYPELYKADISSIPTSSILSKPIISSSSSEFASFMKSINATDWVRQGHEQFHSEDKCPYCQQKLPSNFEEEIVRCFDKEYEADLSILRSFKANYGAAINDIWKSFSNNLSNAYPKIKNELDSYAKLLDTFRAKVEINSQRFNDKIAHPNTVVELEDLTPLIIELNDTIDSMNSKIKENNDIVSDRAKKQPQCKAAVISYLAFILSDELAKFRDSRSNLQKEIDTLTKEKTAAHNKVTDLRKTISSLRKKVVNTSAAVEGINTLLADTGFQGFYLREKENTPNVYEVIRTNTGLVAENLSEGERNFIAFLYFHQLVLGSPEADAVVNDKIVVIDDPVSSMDSSTLFVVGALVRDMIAICNPDYTTKEHSKDHIKQIFILTHNAFFHQEVTYNQAQHYRFVSFFEIVKYDNNSDVILCTQKNRETPSLMENRNPIQNSYAALWDTYKEVSYPNTLVNVIRQILDYYFLQLCGYSGMDIKDIILKQHRDDFIKKLPDGTEDCSDLHLAASLLQYLCTSNDRISDGLNFIHASVDTDSCRRIFENIFRHIGQGQHFDMMMNR*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0068	shell	direct	high	2261	1.0	GCA_000463425.1_01354
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1290627	1292018	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	50505	51896	GCA_000463425_1_1_1319	GCA_000463425_1_1_1319	+	1991156	.	.	hypothetical protein	MDNLWLLTEERPKPSVILQIIEMYCNDFDDSIIFNTKIKIKPHIENGCFKFIYEVEGLKVNNADKIFIKTVSGSSSFLDFLLFKQADAPTEGNHNDNLIMAIEETKTSDDESRNTGVYQRGSKFVYITPYYDSVKLYMLYNEELEARQDKKPSDTSIFGTNILLTLGVTIVGKEIAKWFKPFSSLEELIEFKSGMRQPPAGNVPITITQYDDRIEISGRLSKPGDAGNIGHDPNIGALSMISKCIRTLGWNKDIIITMHGVRQEYVNKTKGKNKFLYICNILDLKLDGIIMPEKVELPELYWHYEMSSEKMTSILLHVLGMYNGMYGVYENHAGCERGYFRTKLGRLITLPKKDRNGTNLYLPDVVLYDEPSNIILLVEGKKLSTLANGIEEIKYYDSIENEYIKPEYIGVNIIRCVSIFGGRKTGYLHDDVLIYMNLKGEIYINPNAPDCVKSMFRAMGVTI*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0069	shell	direct	high	1391	0.999	GCA_000463425.1_01355
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1292015	1292560	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	51893	52438	GCA_000463425_1_1_1320	GCA_000463425_1_1_1320	+	1991156	.	.	hypothetical protein	MILREEYIITPDFYQEALNYAQSSRAYTSNRHDFHAGGLNNKQQKMFEGKLGEKGFKMFLIENGIPFIEDHSSPQERDEYDFLLSTTEQQFLFDVKTRTKSFHTRTLEMVEQAQSHPKDIFISARLFSERNVVKLLGWYSFQDMINSGRIENNGYLDNYVMYDSDLRPMEELYNLILINCI*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0070	shell	direct	high	545	0.998	GCA_000463425.1_01356
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1292732	1293868	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	52610	53746	GCA_000463425_1_1_1321	GCA_000463425_1_1_1321	-	1991156	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MVSRNSILNIQAIETILSEAGIDEIEIIIREIETQAKKTIKQRIKEAQPHVNEAYDKGEFFLEIYPDYDRSKLPGWVAKEINVAKVIGNSKKTVILPNGRKYQLNNTLNHLSGGEWTYFINSVINTAYKTSGEDSFAHKIRKVHPTPKPPQLMRDIIQFFTKEKELVFDYFMGVGGTLLGAGICDRKAIGIDLNPAYIDAYKRAASEIGVPEFQCVEGDCLEVLGDNKKMEELLSGDEISLVLIDPPYGNMMSREKTGADIKVYGNVATPFTDSDKDFGNLELDIFFDRLKESVEKVLPYVKKRGYVVVFIKDIQPNGKSTNLLHAEIINKLNEIPNMNYKGMKIWADQTAKLFPYGYPFSFVANQIHQYILVFRKEK*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0071	shell	direct	high	1136	0.999	GCA_000463425.1_01357
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1293844	1294737	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	53722	54615	GCA_000463425_1_1_1322	GCA_000463425_1_1_1322	-	1991156	.	PDB:2DPM_A	Adenine-specific-DNA-methyltransferase	MSYIKSPLNYTGGKYKLLNSLFRIFPNDINVFVDLFAGGFNVGINANANMIICNDQIHYVIKLYQYLACTNIDTIIKEINQRINEFSLTKQNADGYNALRERYNEGKDIVDFFVLTFYAFNHQIRFNNSQKFNTPFGKERSSYNESIERNLISFCQALQCKNIVFQNKDFLSVDLSYLGERDLVYCDPPYLISTGSYNDGKRGFKDWTPVEERQLLDLLDELNERGVKFALSNVLYHKGMSNDLLIEWSKKYTVHYLDKSYANCSYNFKEKDAKTVEVVIVNFESEDFVQWYQETLF*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0072	shell	direct	high	893	0.999	GCA_000463425.1_01358
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1294747	1295778	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	54625	55656	GCA_000463425_1_1_1323	GCA_000463425_1_1_1323	-	1991156	.	PFAM:PF02086.14	Adenine-specific-DNA-methyltransferase	MRFIGCKTLLLDNIKQVIEEKAPDAESLCDIFSGTATVARYFKRWYEVYSNDLLYFSFALQKGTVENDSVPTFEELKESTGINDPIKYFNGLTNQEMQSLSQEKRFFQNTYAPTGGRMYVNDENALRIDFARITVEEWHLNGLLSDNEYYYLIACIIEGIPFVSNISGTYGAFHKKWERRSHKKYELFRLEVTHNGKANKCYNRDGVELLKEISGDILYIDPPYNGRQYLPNYHVLETAAKYDYPEVRGVTGQRPYENNKSDFCLKTKVVKAFDELMCNANFTHIILSYSTDGLMNVEDIEFTMKKYGKPETFKIYWIPYRRYKSRAQGDKEELKEMLVYIEK*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0073	shell	direct	high	1031	0.999	GCA_000463425.1_01359
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1295775	1295960	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	55653	55838	GCA_000463425_1_1_1324	GCA_000463425_1_1_1324	-	1991156	.	.	hypothetical protein	MENTLMYLDTYIIQQDMRIRLPKCILTNMKVEKGVSKFDIYLDPVNNELVLKIHDEGGKNE*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0074	shell	direct	high	185	0.995	GCA_000463425.1_01360
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1296759	1297379	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	56637	57257	GCA_000463425_1_1_1325	GCA_000463425_1_1_1325	-	1991156	.	.	hypothetical protein	MRDKYSKSNINNVSGNIFNGPTNIAAGNNYYKEAEEDKVASYTPEPVWRSPITMAMLSWMGFIISLIGLFPMYKMLEPIINLITNKSIKVDLNNNIYVIIFAVIFILFVLVLCLRSITKKETRHPLFFNYAISGLGRKITIEKIRIDKCPICGGTMKYFNKAVECRDITYSDGRTKREVTKKVPALQCKRNSDHWYEVDPAADKLK*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0075	shell	direct	high	620	0.998	GCA_000463425.1_01361
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1297393	1298337	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	57271	58215	GCA_000463425_1_1_1326	GCA_000463425_1_1_1326	-	1991156	.	PDB:4BQQ_A	Integrase	MNERKDIVENVTVIQKQRAIKDYAVGIYARVSTSHKAQMDSLSAQVSGLTRLAAVHRTWFVADIFIDVASAKTGSTRSEFNRMINECEHGNLDIILTKSLSRFGRDAKEGLEAIRRIRAAGKRIIFEKDKIDTETVKDELLISIIEACDQAENDWRSENIRLGLKYRAEDGTSGLYNRACYGYKKDKNGMLIIDEEEARVVRRIYDWYLEGYSIGGIIDKLEEKKIKTSKGKERWSKRAIESTLTREKYTGDVAIADPGGSENRYLYKQHHEGIISKEQFKAVQLEMELRSNVEIGEDGKARRKSKKYSSKILK*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0076	shell	direct	high	944	0.999	GCA_000463425.1_01362
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1298618	1300537	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	58496	60415	GCA_000463425_1_1_1327	GCA_000463425_1_1_1327	-	1991156	.	PDB:4BQQ_A	Integrase	MSVDKDWNGLADLIANLITKYAGVLDLDNLPDPMPVDNNIENKNIFDIAKTQIDKNKSDIIYLIYKSKLFWKYKDIEKYIEVNAMSKEKIKVYLYTRVSTSIQIDGYSLEAQKTRMKAFALYNDYEIVGEYEDAGKSGKSIEGRVQFTRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQTMQDFGVNLICVEDGIDSSKDAGKLMISVLSAVAEIERENIRVQTMEGRIQKAREGKWNGGFAPYGYQLVDGKLFINEEEAVAIRTIFEQYVNTTIGANGLSKYLENHGIRKIPRQNGKNPLFDAGLIRKILKNPVYKGKIAFGRRTLEKVHGTRNEYKQVEQDEYLIAEGIHEAIISDELWQAAQVKLKSQAKKYEHVNKGKDVRTHLLSGIVKCPICGVGMFGNKCIKKKKDGTKYKDFYYYGCKHRQMIRGHKCTFSKQIREELLDDAVAELIIKIVSNPKFASIMQEKINMKVDTSEIEKEIDNYQKELRKSHSIKFKLIEEIDNLNVDDKHYKRRKQDLDDRLYRMYDKIEELESLLIDAKAKKQTIEAEKLTGDNIYKVLIYFDKLYNVMNDVERRQLITALISEIQIYEEKQPNGQWLKSITFKLPVIDEDLNISLDNDKQVECVVLM*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0077	shell	direct	high	1914	0.997	GCA_000463425.1_01363
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1301022	1301330	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	60900	61208	GCA_000463425_1_1_1328	GCA_000463425_1_1_1328	-	1991156	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MDKKNHLLFFSSLDHDGHFIDNIVDESVDVEKIVETQMMIWVLRSSISKLNDEEKEIIERLYFNDETISSIASEKEVSYQAIQWRKSNILKKLKKFLEEIFR*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0078	.	unmatched_CDS	none	0	0	.
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1301902	1303260	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	61780	63138	GCA_000463425_1_1_1329	GCA_000463425_1_1_1329	-	1991156	.	NF033396	pilus ancillary protein 1. 	MTGRIIKKWMSLLLAVTMLISMASLNVSASETDKTYQAYDASKHRKVISKNGTTDSEWSLCMDHHKKTPGETDKATGEYSKNENATKDTYTSNGGKGDFQKIKRMLFYKLTHPELNYQVLQNEYYYQQDNKTNKNYDTNYRRNLQLNKQKKDLRAFAEDSSHDDEINSKMEVFIYKAKNPLMQNLISAKLKELPPPTPLEPAKTSLKVEKKWQGIDSKDAPEITVYLVKNGIKTDQSIKLNNGNNWKGEFKDLKVVDNITDKKANIYTIVESGEKDGKVVLEGKEYKVTYAGGKVVNTKEVPPPSTPPTKVKFSKKALTENGEELKGATIRLTKEDGSLVKEWVTDGTVKEFELKDGKYTFTEISAPAKYQVATAITFEVKNGKAIVKGIEVTGNTIVMVDKLKELPPPNTNTNKTLPKTGEGTNISLYAWLMLTSGTLLVLIGYRRRNHAK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0079	cloud	direct	high	1358	0.999	GCA_000463425.1_01365
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1303515	1304135	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	63393	64013	GCA_000463425_1_1_1330	GCA_000463425_1_1_1330	-	1991156	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MKYGYIRVSTKEQNIDRQLSAILKEDIEMNKIYIDKASGKNFNRKQYRKLMKKIKSGDELYIKSIDRLGRNYDEIIKEWNLITKEKNAEIIVLDFPLLDTRTKVSDITGKFIADIVLQILSYVAQIERENIKQRQMEGIREAKKKGIKFGRSKKEIPKEFDDVAEQWRNNKISLRNGAKQLNVSHTTFSNWIKEKGYMKDNKKRDF*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0080	shell	direct	high	620	0.998	GCA_000463425.1_01366
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1304444	1304794	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	64322	64672	GCA_000463425_1_1_1331	GCA_000463425_1_1_1331	+	1991156	.	PFAM:PF07328.10	T-DNA-border-endonuclease-VirD1	MANRIRNERLEIKLTKEEKALFEEKRKLAKCRNMSHFIRKCILEKEIYQVDLEPFRYLQGLLSNATSNINQIAKRVNSTGVIYKEDIGDMKKEIEHFSKELWQIHSLLLNKTSGGD*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0081	shell	direct	high	350	0.997	GCA_000463425.1_01367
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1304800	1306131	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	64678	66009	GCA_000463425_1_1_1332	GCA_000463425_1_1_1332	+	1991156	.	PFAM:PF03432.13	Relaxase-Mobilisation-nuclease-protein	MAITKIHPIKSTLNLAISYIVNGEKTDEQILVSTHKCHQETAHTQFLRTRNDAGTNGTVLARHLIQSFLPGETTPEIAHQIGMELCKKILKNEYEFVLSTHIDKGHIHNHIIFNNVNMVTGKCYQSNKKSYHKIRYQSDKLCKENNLSVIDEFYESYKKKYKTNGKSWYENEQEKRGTSWKSRLQFDIDRMIKQAKDWDEFLKKMADLGYEIKYGKHIAFKPKDKPRFTRSKTIGEDYTEERLKERLAERASIKTHTVKKRIGNVIDMNTNIKVKENKGYEYWATKHNLNTMAESVIFLREQGIKSVKQLDEYIQKTADERQNLQDQIKDVEKEMQELSATMEQIHTVKKYRSYYREYKANPSDKAFFEEHKAEITRYEMTLAKLKKSYSKLPDSKDILDKLDKLQEKKNTLMQEYSSSKSTMDELYQIRKNYGIYMGKEMER*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0082	shell	direct	high	1331	0.999	GCA_000463425.1_01368
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1306466	1308742	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	66344	68620	GCA_000463425_1_1_1333	GCA_000463425_1_1_1333	-	1991156	.	cd04847	Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	MSENNLPIKLVLPKTTDIVPNAGGGQLKFFGEVTPQLKREITDKFENLLSFYSDVFNENESIPAVGKITVKPEAIAKSHKPSDLCRNCPIIGSEELNEIYIKVNRKNIQETIEMVKNPPSQRFQANMTAIVDIQPIKPEEKISPTLHSIVQEDFNSIKKVIKLKVFDFDDDFDNAQIWDYVIRKLCSLHFEDKYEIISYGDQLKFLKIEVTSYDDIIKLASINGVKTVGFFQEYSLPQNDFSVTAIQTLLDSEYRDSDVTIGIIDGGISDDNPFLRPYIVAREEYVNKVYQNPQHATFIASTIQYGNVLNSISAPVAYRFKFVDIVAVPNSDEDFGLTDSITEDDLMEIIEEVMEKYSSTTKIWNLSLGIENKPCDGSMSDLGVFLDYIQDTYHVQVFVSSGNVNSLPLRNWPPQEGIGEHDRLISPADSVRAITVGSVALFDSADSIVKFNEPSPFSRRGPGANYIVKPDVVDYGGNYSTSYKIDGLGVKGLNSSGKIVEGNGTSYSTPRSLQKYASIYEEMIEPDLLLAKAMLIHSARMNSRELLDEHPDNIKYYGFGIPSADTQDILQCSKDCVTLVFKQKISQGSHLEMYDFPYPKSLIKNNKYIGEIGMTLAYLPPLDQKYGREYCRTNIDVSFGTYSYIDSGKIDYKGQVPLESKWDEKFESARVEHGFKWSPIKSYYRKLNRGIKLADGWKLRVDLTPRNGLYVPSQEFVLIITVKDSNGNDIYSEITSALRERGYITNNIETKFQVRQRQ*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0083	shell	direct	high	2276	1.0	GCA_000463425.1_01369
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1308745	1309872	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	68623	69750	GCA_000463425_1_1_1334	GCA_000463425_1_1_1334	-	1991156	.	PDB:4M4W_K	Replicative-helicase,-DNA-primase	MMKYSIEIGKIIEGALKHDQAKVINYTKQLVSKLEKDDDSRSAAKFQRLLSAQVESTLTSMNSSNSIAIPVDTESRMNLADIIYPYQNDIEVILSKRNEEKLDSFILSYQNADKLNSLGINGSNSLLLYGPPGCGKTKCAYLIAKKLNLPLVVARLDSLISSYLGTTAKNIRSLFEFAQKMPCVLFLDEFDAIAKARDDNNELGELKRIVNSLLQNIDTMSKDSLILAATNHQQLLDPAIWRRFDYKLEIELPDKDAIAALITLFSNGIYKFSQKEILEISTLLDGQSGSDIEDMITKAIRNSVIHNSSFSVSSIYEELFITKNIIPQNCNDSRELLQIKAKYLRDKDSKIFSLQTIADILGSSKTTIQKIVKEV*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0084	shell	direct	high	1125	0.997	GCA_000463425.1_01370
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1310442	1311080	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	70320	70958	GCA_000463425_1_1_1335	GCA_000463425_1_1_1335	-	1991156	.	4GS3_A	Single-stranded DNA-binding protein	MDYKTMRDNNHRDFVKAIIRMEKGINDESALDKLYDAYMDNDTVNLLHEGFDYMIEDLREQGQIKDLPYVQEEKDNLVNIVGNIVGKVDVVERENKNGEAFKVANFSVVSKDDEGNKVYHNCSAYGEKSDIPKDFKQGDFVKLFGQIRTSIDDNGKEHSNVRILSSKLLKAKEQMKGQEEKKESVLGAIKKYQAEDKEKPKEKKEANREAER*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0085	shell	direct	high	638	0.998	GCA_000463425.1_01371
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1311123	1313549	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	71001	73427	GCA_000463425_1_1_1336	GCA_000463425_1_1_1336	-	1991156	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MRNVAGIGQSEAFKSSDMFMKCRYMDEMTGGKGVVFATGTPVSNSMTELYTMQRYLQYESLKKNNLEHFDSWASTFGETQSAFELSPEGTGYRVKTRFSKFYNLPELMSMFKEVADIQTADMLNLPTPEAHYEVIKTLPSEEQKEILKSLSERADDVRNRVVEPDEDNMLKITNDGKKLALDQRLINPLLPDNPDSKVNVCVKNVFAIWDKTKDDRSTQLLFSDMSTPKGDGEFNIYDDIREKLVAMGIPKEEIAFIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQRAGRIVRQGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTSKTPLRVAEDVDESSLNYAEIKALATGDPKIKEKMDLDNEVTKLKMFEANFKSNRYRLEDKVAKTYPEEIARTEKLIEAVKKDISEVEPQGEGENKFTSIAIFGEKITDKKLAGERLLEAIKTVKINESKMIGKYRNMDLEVSYNFFTNEHNFSLNGAAKHSGELGTSADGNITRLDNALEKMPEKLKRLEEKLTSTKEQLENAKEELKKPFEKAEELKSKILRLAELNKLLDMGDVEEKRNDNPLVEDVKRAIIDFCNREYEENYSYEEFNTLYPDLKHIGIAYTNTPDERHGIQYELNLEDKTWTQYIDDTPIKTESFDYENKGENEALKNMKNEIVLSSFEDLTYIDTENLKAALGLEIDDEGNFYDPLAKDLDNDGIADRYDNDFKDSDYFESTYDVENNLHSKGETTQKSEDKPSILGQIRAYQNESKAEEKQTTKEQEYVR*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0086	shell	direct	high	2426	1.0	GCA_000463425.1_01372
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1313767	1317522	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	73645	77400	GCA_000463425_1_1_1337	GCA_000463425_1_1_1337	-	1991156	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MTDEMLERIPELYAQEDVPLADKEVHAAYIIPFRSNWIWYMTEYDRESGDAFGLVLGIEPEWGYFNLEELKELNAQRLILEDFPKTFRELKDSELKKQMDEQELQFVFNGELSFEEEIELDVSEEIEERVPVTPIQGTLFDYLKEREEVELNEKAESLAGEFAVKEGDTVYFNYEEYRVREISKNQITGRNDLWLDPFRTGNHQIPIVAVEDNEDLLKQINLERPAFIICDEVKYKDKDYTITRFDDMGNNLKTVTVKDNTEYLGGMITGSDVIPYRLESDLERVFQNLTYTKLEKTIEEVKIKKAEAHNFKITEEMLPEKLSPSQRLNNNLEAISMLNRIERGERDLDINAQEVLSKYVGWGGLADIFDESKKGQWEVARNFLKENLTQVEYEAARESTLTAFYTPKTVIDGVYRTLSDMGFKSGNILEPSMGIGNFIGNIPDEMKKLKFYGVELDSVSGRIGKLLYPESDIQIKGFEETSFSNNFFDAVIGNVPFGEYRVNDREYNKNNFLIHDYFFAKSIDKVRNGGIIAFITSSGTMDKKDESVRRYIAARAEFLGAIRLPNDTFKGVAGTEVTSDIIFLKKRDSIRERDEDWVHLSEDEKGLVYNKYFVDHPEQVLGTMREVSGRFGNTLACLPKENADLKELLTKAGTEISKNAKYEEIELLDDEISTIPATDDVKNFSYTIIDDEVYYRENSLFVKKEVTDKNKEKIKDYLALNDALKDVIYKQKEDFSDDEVRKAQEKLNEVYDSFSKKHGYVNNLSNTRSLKEDSNFPLVSSIEILDEEENFKAKGDIFSKRTITKAKTIDHVDTSIEALVLSMSEKGYVDFEYMGSLTGKDRPNLIEELRGEIYLNIREEQNFYRPLSFNLEDGDLPFACANGSNSYKYGYVTKDEYLSGNIRDKIAIVDSYLSKLRQTERELPHLGYAEDGKEKELISYEMNRLEYQKAELVKVLPKELEASEINVRLGATWIPIKDIEKFIFETLKTLGWARWDIKVKFSNLTSEWNIEGKSRDKGNDLAEMTYGTSRVSAYKLIEDALNLKETKVFDQIVNLDGSKTSVLNKKETLLAGQKQELLKEEFKNWIFSDQERRNRLVKLYNERFNSIRNREYDGSNLSFEGMNTKIELRPHQKNAIARSLYGGNTLLAHVVGSGKTFEMVASAMKSKRLGMCSKSLFVVPNHLTGQIGREFMQLYPSANIMVADKKDFEPKNRKRFIGRIATGEYDAVVIGHTQFEKIPMSKEYQEKHISD*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0087	shell	direct	high	3755	1.0	GCA_000463425.1_01373
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1317591	1319846	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	77469	79724	GCA_000463425_1_1_1338	GCA_000463425_1_1_1338	-	1991156	.	.	hypothetical protein	MRINDFHNILELVKLDILQSEAEYLKLLKVVGNNQRYDFRSQLSIYDRNPEATACAKFDYWRERFNRTVMRGQKGIPILEDYGTYKKVDYIFDIGQTVSRNRDVNEVNLWRFDKEAHQDVLKEMIKSEGYDESESTIENIFSLSRFYGDEKIDSLMNELRIADEDRISFVKFIRDSISYAVASRFQLDYPMDSELLRENFERLDTISLMSLGETVSDISGKIIDETIQKSKKLKLQKEVLRGKEAGYNKIKEGIEKGDNDVLRRDDQERNGNERVLRNGEYGRDNRENQGEYAKQLGGIDRIYEDLSESDLRSNEAGLSITERGAEPLRDVGGSIQGEETDRTPDGYSETSDRIYEKRESEADGSLEDRGREQSTVQSNDFSFERDDDQGNTRRLKENIDVEIREADKASFSLPENSYGQMRLTIPLSPKDIDIVLINGGNHDGSRLPVIAEFSKGKSNEELGEYLKDTFRGGNGFYIDEREVSSWYSDKGIHLAYGTSAREDDTQILSWSDAASKINELLENGEFAINVELSEALDYERDRISESLWYLIHDLSEKGKEQGFFEFLEKGGGFPDETKRLSEALKNPEYLVDVIKEYGRFLEAYREDREVLRFHYHKVDSLYQKLQELALPRKEYTSNLTELPKVKAFITEDEVFATLSRGSGIDRGKERITKFFKENHTLQEKANFLKDEYGIGGSSHAVSGAMGSDEWHDAKGLKLQKNNCNDVFLTWSSVAKRILMSCFIKIFMKKRK*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0088	shell	direct	high	2255	1.0	GCA_000463425.1_01374
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1319931	1320416	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	79809	80294	GCA_000463425_1_1_1339	GCA_000463425_1_1_1339	-	1991156	.	PFAM:PF04326.13	DNA-helicase	MIIDDEKIMVENSNLAHGMGALDLQKFEPFPKNPAISKVFREIGLADELGSGMRNTYKYTQLYSGQNPLFEEGDIFRTIIPLKKIATQKVGGGNVPHDVPQGRDELIEFIKTQVRLNNKITRQAIAEGAGVSVKTIQRTLKEIDNLQYVGSGNNGHWELNE*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0089	shell	direct	high	485	0.998	GCA_000463425.1_01375
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1320525	1321385	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	80403	81263	GCA_000463425_1_1_1340	GCA_000463425_1_1_1340	-	1991156	.	COG2865	Predicted transcriptional regulator, contains HTH domain [Transcription]. 	MFLSKKILRNKGGEMTHMTIDEIKKLIQVGEKIDVEFKESKNALTKDVFDTVCSFNNRNGGHILLGVNDKREIVGVSEDKVDKVIKEFTTAINNPQKMYPPLYLIPEVFDIDEKKIIYIRVPEGYQVCRHNGRIWDRSYEGDLNITDHSELVYKLYARKQGSYFVNKVYPNLDIDFLDASVIDKAKKMAVSRNKNHVWENMSNEELLRSANLILTDPETKREGITLAAILLFGKDNSIMSVLPQHKTDAIFRVENKDRYDDRDVVITNLIDSYDRLIEFGQKHLND*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0090	shell	direct	moderate	819	0.951	GCA_000463425.1_01376
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1321354	1321533	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	81232	81411	GCA_000463425_1_1_1341	GCA_000463425_1_1_1341	-	1991156	.	COG2002	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module [Transcription, Defense mechanisms]. 	MKDIFMDTAKVMSKGQVTIPKRIRELLNLENGDYVTFVVNKDRVEIQNSNVFIEENIKK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0091	shell	direct	high	179	0.994	GCA_000463425.1_01377
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1321617	1323323	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	81495	83201	GCA_000463425_1_1_1342	GCA_000463425_1_1_1342	-	1991156	.	PDB:5D5H_A	DNA-topoisomerase-1	MKLVIAEKPSVAISIAKVIGANKKKDGYYEGNGYKVSWCVGHLIQMANPDAYNEKYAKWNIEDLPIIPSDYKYEVAKATKKQFNILKKLMNDKEIDTVINACDAGREGESIFRLVYSEAKCKKKMQRLWISSMEDSAIKEGFSNLKNGEDYDNLFESAQARAIADWLVGMNISRLYSCLYQQNYSVGRVQTPTLYMIVKRDDEISNFKKEKYYTVELSTNGFTLSTDRIDDEVAAEQLLNLVGDKIEIIDVIQKEKITKPDLPFDLTTLQRECNKYFGYSAKQTLDYAQSLYEKKLITYPRTDSRCLTEDMITSTVNNILGKNDFDTERIKVVFDFKKVTDHHAIIPTVSSLSEDLSGIPESEAKVYRLISNKLHASVGYPLIENTTKIVASFDGFEFTSAGKVVKDDGFTKYLKDYKSKKNEDIELPDVKVGDVFEVENKEIKEKFTQPQKHFTEDTLLKSMEIAGNEALEKGVEVERKGLGTPATRAGIIENLIFKGFVERDKKNLIATHKGISLVTIVSDSFKSAETTAKWEMELSDIAQGKSSKEEFLKDIENEIKEAVMTYSK*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0092	shell	direct	high	1706	0.999	GCA_000463425.1_01378
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1323421	1324965	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	83299	84843	GCA_000463425_1_1_1343	GCA_000463425_1_1_1343	-	1991156	.	PF14283.6	Domain of unknown function (DUF4366)	MKTNLKKNNKFWTVALAVIVSISCILGLWTVVYAQEQKSEAPTKNEAVQTEVEVNVRYIFEDEKVFKEEKIKAEKGQLIDSGDLPMLPDDMKFIDEFLFYEVKGDGKDEIIRKIAKIEVKNKETQTEEKKPQQDKSTQTEDKKTKDKSTQTELSKEDISKMEKQAKELKGELDKLNGEIKDKDKLSDKQKEKIKALEDEIESLKEKLKKEKDNKDLSSDIKKEMDKLNEKIKDLEKKANEVNKAPASSNVVIPIPPNSSIKTSAGNSQPLVNTGKGSEPKTSFGNTTKDENTKQSKDKEKEIRYPNKLTAKTPANNNSQDSAMDGTSKSVNTNKGVASAPSKARGSLTENKDNANKEYPIHHSDDKDNKETDKYLADARQFITFQTKNGKTFYLIINHDEDSENVMLLTEVSEDDLLNMVEKKEAPKQEVVKEEPVKEEVKPEKKDEKSNLGTYIILLLVVGGALGAGYYFKVVKKKEDKELEALEEEDGDFFSEAESEEETNDTDEVEAEDEK*	hhsuite_tools	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0093	shell	direct	high	1544	0.999	GCA_000463425.1_01379
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1324940	1325179	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	84818	85057	GCA_000463425_1_1_1344	GCA_000463425_1_1_1344	-	1991156	.	.	hypothetical protein	MKKELIAVKNRIKKLNDKKALIDEELEPLFIREEELENEEIIAICRKNNITIIDLMAKVNRQKAELKKEKINENQFEKE*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0094	shell	direct	high	239	0.996	GCA_000463425.1_01380
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1325191	1327323	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	85069	87201	GCA_000463425_1_1_1345	GCA_000463425_1_1_1345	-	1991156	.	4Q4G_X	Peptidoglycan endopeptidase RipA (E.C.3.4.-.-)	MGKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKTSKVSADNEKSYGTSKRNEKYRVSDKGSITSVTETGRADYVTEVKDGKIYDPLGKDLDNDGIIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQKAQKKNYKRKNYTENLYTRKKDDVLKENKPEDKKAGKDAVSEKIHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLSHGSDENQGVEAGEKTADTSSKLIHGIKKYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDAKKELKKTDEYKRASAYKRLQKKNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKAKGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSYLSKPNVLSEINQKFSDMEGELQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFESMYDLEYREEIEIRYRTVTETYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFANYPDNLKHYEALFLAQGNMGEAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRSKLKVGMLVAVESSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0095	shell	direct	high	2132	1.0	GCA_000463425.1_01381
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1327327	1328832	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	87205	88710	GCA_000463425_1_1_1346	GCA_000463425_1_1_1346	-	1991156	.	COG3451	Type IV secretory pathway, VirB4 component [Intracellular trafficking, secretion, and vesicular transport]. 	MRGNLHVRCGVGENLEITSKDYLSLYILPSDLITYGEDVKSLLKDFQTRDERMFVVSIVFMNFERTVQKLDNTIAQISSIANKHNCKLKRLDHSQEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGGSGLTAEEKSVIDRCLPKIYEKYFENPEPCNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNKKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFFGNTIVPFIDKFPKDTILYQKMTTKLEEVR*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0096	shell	direct	high	1505	0.999	GCA_000463425.1_01382
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1328851	1330725	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	88729	90603	GCA_000463425_1_1_1347	GCA_000463425_1_1_1347	-	1991156	.	PDB:6AR3_D	Reverse-transcriptase	MNTNLERQPKRQKLRNAEYYDMQDLTDKLYQESIQGKTFNKLMQLITSENNILLAFRNIKNNKGSMTKGTDGKTIKYYKEWSEEQFVKYFQDKFKNYHPKSVLRVEIPKTGQPDKTRPLGIPCMDDRIVQQCIIQILEPVCEAKFHAHSYGFRPNRSASHAIARVQSLMNVSKLHYVVDVDIKGFFDNVNHGKLIKQIWTMGIRDKSLISIIGKILKSKIEGIGIPEKGTPQGGIISPLLSNIVLNELDWWLSDQWETIQTRHKYTASHKYDALKKSKLKELFFVRYADDFKILCRDYKTAQKIFVAVKNWLFERLELEISPEKLKITNVRKGKTDFLGFLLYVSKKGKKYVSRSNVSDKAKKAMKIKLKEQIKEIQKDTSPHQVNQLNSMILGMHNYYNVATGCSIDFREINFVVSKSLKHRLREKTKKAKRNKKAKKLLSGKVPKSKTYERFYGRYNQKPKIVAGIHIFPIYGCRFVTPRMFSREVNKYTPQGRVLIHKNLSTGRYLVEYLLEMKEYDKSVEYNDNRISLMAGQNGKCAVTGEALNIFNMECHHKKPKHLGGTDEYKNLVWLRTEVHKLIHATDKDTIEKYLSILKLDEKALKKVNSLRLLAENLEIVVSKN*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0097	shell	direct	high	1874	0.999	GCA_000463425.1_01384
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1331420	1332475	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	91298	92353	GCA_000463425_1_1_1348	GCA_000463425_1_1_1348	-	1991156	.	PF11130.8	F pilus assembly Type-IV secretion system for plasmid transfer	MQNEKALRSQKRDLKKSNCKSKKDKGGILDLIFKKEPKRYTVEDTIPYLRLLKSGICQLDERHFSKSIAFQDINYQLALDEDRDLIFNQFANFLNSFDLSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGLKKSKYVTFTVEADNLEQATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNPNKTFEFSYKDLKKRESTKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINISFHIRAIDQLEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMGATRSLITTNVVGNKAYTKINLYRELIFQE*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0098	shell	direct	high	1055	0.999	GCA_000463425.1_01386
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1332423	1332812	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	92301	92690	GCA_000463425_1_1_1349	GCA_000463425_1_1_1349	-	1991156	.	pfam12666	PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	MAYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFMRKFVPNDIAVIFLIVSTLPIFFITLFEKDGLTFEKYFKHIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIEKSKAGLKEK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0099	shell	direct	high	389	0.997	GCA_000463425.1_01387
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1332816	1333079	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	92694	92957	GCA_000463425_1_1_1350	GCA_000463425_1_1_1350	-	1991156	.	.	hypothetical protein	MNKRKTVFTAVVIGAGIMAIIDRIRLHNKVEELEERTDDIGRCHNDFCLMQERYNKSTNEQIESIQEEIGSVYEHFEGLSKGKEDGR*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0100	shell	direct	high	263	0.996	GCA_000463425.1_01388
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1333097	1333960	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	92975	93838	GCA_000463425_1_1_1351	GCA_000463425_1_1_1351	-	1991156	.	pfam19478	TrbL/VirB6 plasmid conjugal transfer like protein. Although members of this family are uncharacterized it appears to be related to pfam04610 which is a conjugal transfer protein TrbL/VirB6 found in proteobacteria. This protein family is found in Firmicute bacteria, and is approximately 170 amino acids in length.	MFGIFDKIEEFFKELLLGGIQANLESMFLDINDKVGAVATDVGKTPMGWNGDVFAFIKSINDSVIIPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMWIAVWLVSHAFEFSMAVFDVAQHMVNKAAGVINTSATVSGDQIVAMMDTLKEKGLGELVMILFETSLIKVAIQVISVVIMLVVYGRMFEIYVYSSVSAIPFATMGNKEWGQIGTNYIKGLFALGLQGLFLMVCLGIYAVLVKTIKITDIHTSTMTILGYAVLLGLMMLKSGTLAKSVLNAH*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0101	shell	direct	high	863	0.999	GCA_000463425.1_01389
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1333980	1334195	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	93858	94073	GCA_000463425_1_1_1352	GCA_000463425_1_1_1352	-	1991156	.	pfam12750	Maff2 family. This family of short membrane proteins are related to the protein Maff2. Maff2 lies just outside the direct repeats of a tetracycline resistance transposable element. This protein may contain transmembrane helices.	MAFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLN*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0102	shell	direct	high	215	0.995	GCA_000463425.1_01390
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1334199	1334510	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	94077	94388	GCA_000463425_1_1_1353	GCA_000463425_1_1_1353	-	1991156	.	PF00436.25	Single-strand binding protein family	MKQEMININANLVEEPTFSNFEKDGETVEVANFTLIKKYGKGKEYINCAAYGEKAEKAKDFEKGDLIHIFGYFKKREKEGKTYKNFVVKSYNKIEKKEEDEEE*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0103	shell	direct	high	311	0.997	GCA_000463425.1_01391
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1334674	1335396	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	94552	95274	GCA_000463425_1_1_1354	GCA_000463425_1_1_1354	-	1991156	.	COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase  [Intracellular trafficking, secretion, and vesicular transport]. 	MSEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPIHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLFLGGKEKTTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYRLLEDYDKKNLFDIESYMKLKGKAKLNRETVITRMQ*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0104	shell	direct	high	722	0.999	GCA_000463425.1_01392
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1335498	1335683	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	95376	95561	GCA_000463425_1_1_1355	GCA_000463425_1_1_1355	-	1991156	.	pfam14202	Transposon-encoded protein TnpW. This family of proteins is found in bacteria. Proteins in this family are typically between 54 and 75 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MYENKNEQNTGTKTIKKIGKVTYEVVVHFNENATETMQDKLKRIMLREMEREKHQKGDKND*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0105	shell	direct	high	185	0.995	GCA_000463425.1_01393
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1335784	1336782	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	95662	96660	GCA_000463425_1_1_1356	GCA_000463425_1_1_1356	-	1991156	.	pfam10543	ORF6N domain. This domain was identified by Iyer and colleagues.	MAEENREIVVIDETTMKSKIYYIRNQKVMLDFELAEIYGYETKTFNQQVKNNIEKFDEDFRFQLTKDEWEFLRSKILTSKSDEGSGGRRYMPYAFTEQGIYMLMTVLKGELAVKQSKALIRMFKQMKDFIIENQDFISSKELVQIAVQTNENTKDIAEIKSQMATKEDLKKVMDNFIDPDTYKHFLLMNGDKIEADVAYTKIYKSAKKSIYVIDNYIGLKTLELLRAAKDNVEVIIFSDNVRNKDMLTKNILNDFRRDYPNINLKMKIAGKRYHDRYIAIDYGTENEAFYLCGASSKDAGNKISSITKIEESSKDMYHTMFGGMLKNKNLKI*	mmseqs_cdd	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0106	shell	direct	high	998	0.999	GCA_000463425.1_01394
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1336855	1337178	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	96733	97056	GCA_000463425_1_1_1357	GCA_000463425_1_1_1357	-	1991156	.	PF07205.11	Domain of unknown function (DUF1413)	MRIQFTVTDEELEILTEKAIEGGFPSITEYCKCSSLQENTSYADLYTTLLNKISSLPKGKEFVLRELIATPPALIGRWFYENVNKGLVKNVEHIGKAEGGVEKYKRI*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0107	shell	direct	high	323	0.997	GCA_000463425.1_01395
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1337360	1338103	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	97238	97981	GCA_000463425_1_1_1358	GCA_000463425_1_1_1358	-	1991156	.	PFAM:PF09681.9	replisome-organiser	MADNRRYYWLKLKEDFFTDKRIKRLRRISGGDTYTIIYLKLLLLSLKDSGKLYYDGVETDFIKELALTIDETEDDVMVTVNYLMAQGLMEIITENDEYFLTEIPSLIGSETASTRRSRKSREQKALQCNTGATPTQQNCNGDIEIEKEIDIELEKEGEIEKISPFFYGEYKNVSLTDEEYGKLKDKMQGHREKMIEKLSTYMQSTGRNYKDHYATLIHWYEQDKGKLKESSKSKVYTFEDYDKGLHL*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0108	shell	direct	high	743	0.999	GCA_000463425.1_01396
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1338412	1340046	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	98290	99924	GCA_000463425_1_1_1359	GCA_000463425_1_1_1359	-	1991156	.	PFAM:PF03389.14	MobA-MobL-family-protein	MAETFHFSISMISRGKSKSAVASAAYISCEKLTNEWDGVIHDYHNKKGLLHSEIFLSENVPKKFQDRSFLWNSVELNEKASNAQLARNFIIALPKELSFEENKNLITDFIQENFVSKGMIADLAIHDESSEGNNNVHAHIMTTLRPINEKGLWQPKSKKEYVLDETGEKIKLKSGNYKTRKVELTDWNDKGNAEKWRESFASLCNRYLEKNNLEKRVDHRSFERQGKEEIPTIHLGASASALERKGIETDKGNINREIKKHNSLVKAIKNKIKEITSWIDGLLGNLQAKYDEYKQTKKDELENKAELFNLYEYISIYNDIQGEKTKNLSYYGQIKKGNADLKRFVKAIYYLKDNNLRTIDDLQGKIFELARQSKKISGDIQSKTQRIKDLNQCVSCIDSIKDNKEVYQEYKSKTLFKDSFYNSHKKEIDRYLRARKTIEKFTGTSSIKLNEWEKEITKLEKEIETLNKDKIKIQDEFKQIDHIKYAVKTVNDDYGIDLSIEIDKAVKRGEKPSVIAQLKKFQEQQEKAEQYHQKAKEKYTEQER*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0109	shell	direct	high	1634	0.999	GCA_000463425.1_01397
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1340291	1340620	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	100169	100498	GCA_000463425_1_1_1360	GCA_000463425_1_1_1360	-	1991156	.	pfam12958	Protein of unknown function (DUF3847). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	MKKEKTLQEIQEQISELQEEKEKCDVKLKQLQNQSKKLEKLANEKERKRRNHRLIQRGLIVERVVKNSLMFTNEEIEKLLNIATNTAEYKKAYAEMINRKDVENETDIE*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0110	shell	direct	high	329	0.997	GCA_000463425.1_01398
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1340703	1341116	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	100581	100994	GCA_000463425_1_1_1361	GCA_000463425_1_1_1361	-	1991156	.	PFAM:PF07638.10	RNA-polymerase-sigma-factor	MAKEYYLYVKGKAVPVSEEVYKAYWKITEHEKYLQRKDWKHNVIPFSALDHDGHFVDNIIDEKIDLEKIVEVKMQIEELNKALATLTKEERDLIEAIFFREESLKSIGEKEKVTHQAIGKRRDRILEKLRKILEDKI*	phrogs_hmm	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0111	shell	direct	high	413	0.998	GCA_000463425.1_01399
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1341373	1343115	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	101251	102993	GCA_000463425_1_1_1362	GCA_000463425_1_1_1362	-	1991156	.	COG1132	ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]. 	MRELLKTLYEVSGSYSKRITKMLIFDVIKGIFEGVSLGAILFCLMKICESIFNGQSIVIKDIYTVFAIATMSVVGKILFGYLADRNKYIASYSLGAENRLYIGDRLKNVNMGYFSTNSLGNVSGGLSTVIGELETVGVLIIEQMLVGTIQTIIIVLFVLPYDLITAIIILLTLIVGVLVNMSTQKKTDILTGKLLRLKLDLSSKIIEYVKGIGIIKAFGKDENTVKELNDSITESRKGFFAVEKILVPTQFLFLLVFKIGICVIIFSSLMRYFSGSIYATKTIILIVMSFVVFSGFELAGSMQSIKGVAVQNLNSVINLRSLPVIKEGNKTKVDTVEIEMKNVSFSYDDSELFKNLSLKIPEGKTTALVGFSGSGKTTLCNLMARFWDVQSGEVKIGSNNVKEYNYDQLLSNFSFVFQDVYLFDDTVKNNIKFGNPNATDEEVIDIAKQAQCHEFIMKLPDGYNTILQEGGSNLSGGERQRISIARAMLKQSKFVILDEATSSVDPENEKQLLIALKNLLKGKTTIVIAHKLSTVRNADKIIVLKNGVIEQIGTHTELKSKDGIYRDFITNRRKSEEWVV*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0112	shell	direct	high	1742	0.999	GCA_000463425.1_01400
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1343117	1344829	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	102995	104707	GCA_000463425_1_1_1363	GCA_000463425_1_1_1363	-	1991156	.	COG1132	ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]. 	MEVLKEHKGKVFTSALIAIIGVGLDVVPYFSVANIINNIVEGKVEIGAYIPYILAVLVGLLGSVLFHELSTIISHNLAYRVIEGKRKKLVDKLSKISMGEIEKRSSGQWSQFMVETLDKMEQPIAHVIPEVIANLLIPIVLVVIIFIMDWRIGVANLLTIPLGLLFFMMMMRGYEEKSKRYQEASKAMNTTMVEYVNGIKVIKAFNKSASSFGKFKETVNENKKAMLDWYLSVCFSMTGAMETIPATMIFVLPTSLYLFMQGSVEMSLLIMCILLSYASYKPLIKAMSHLETMANIKIVMKEINKVMEISDLERGKQLKHIKSYDVEFQNVSFAYDESKNVLNNISFKANEKELTAIVGDSGGGKSTIAKLIAGFWNIDKGKILIGDVDLNDMPLKQNMELITYVSQENFLFNKTILENLRVAKEDASMDEIKEACVKASCHDFIMNLPNGYETVVGEGGSSLSGGERQRIVIARSFLKNSPIVLLDEATAYSDPDNEAIIQESIDALIKDKTVIMIAHRLSTIVKANKIIVVDNGNIVEEGSHEKLLELNGRYREMWDVYTEAKEIEVI*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0113	shell	direct	high	1712	0.999	GCA_000463425.1_01401
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1344833	1346248	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	104711	106126	GCA_000463425_1_1_1364	GCA_000463425_1_1_1364	-	1991156	.	PDB:1W1W_D	Chromosome-Mainenance-protein	MIEMRKVFFSYKAGDEIQVSDLNIEIKAGEFVLLCGKSGCGKTTILKMINGLIPHAIEGNYQGKVTIYNKSVREMETFEIAEKVGSIFQNPKTQFFNLDSDGELSFGLENMGIEPCLIKAKVQNTINELDIENLKNRNVFELSGGEKQILAVASVYATNPEIYVFDEPSANIDECGIEKMREMLIKLKEQGKTIIISEHRLYFLVDLIDKAIYLEDGKVKHIFSNTEFSLIDNKMRKGMGLRAFTKKDNIDFVNPIEFHKTDEFVISNLNYRNNHKCVLKNMNISANKGDIIAITGKNGQGKTTLMKIICGLLKENAGTISYNGSLYKYKKRRTLCYMVMQDVIHQLFSESLMDEFTLFDSSVDKEQIDSILTKLELIKMKNRHPMCLSGGQMQRLAVAVGMLMNREIIILDEPTSGLDYLNMMQISEVIKEFSKNKIVFIVTHDKELIDNACNKLFEISDGEIYGFSERR*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0114	shell	direct	high	1415	0.999	GCA_000463425.1_01402
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1346262	1346951	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	106140	106829	GCA_000463425_1_1_1365	GCA_000463425_1_1_1365	-	1991156	.	cd16914	T component of ECF-type transporters. The transmembrane component (T component) of the energy coupling-factor (ECF)-type transporter is a transmembrane protein important for vitamin uptake in prokaryotes. In addition to the T component, energy-coupling factor (ECF) transporters contain an energy-coupling module that consists of two ATP-binding proteins (known as the A and A' components) and a substrate-binding (S) component. ECF transporters comprise a subgroup of ATP-binding cassette (ABC) transporters that do not make use of water-soluble substrate binding proteins or domains, but instead employ integral membrane proteins for substrate binding, the S component, in contrast to classical ABC importers. The T component links the S component to the ATP-binding subcomplex that is composed of the A and A' components.	MGVIPNGVIKLDDRAKIILLLSTSICVFSTGKYIVVTAFTVILMLLSFLLGIGNKIFTAVLNYAFVSIIEYQLFPIMPEVLVANFNILIVTVIKLTPCYLAAQMLIQTTSIRMLMQALEKIKFPKALIIALVISMRYFPALKEERHHISDALKLRNIKGIKKIKFALMPLMVSASNTAEELSQAIIARGIDNPAKRTYEIQSSIQVIDVFVIGASFLAVLYLLIGNVLY*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0115	shell	direct	high	689	0.999	GCA_000463425.1_01403
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1346951	1347544	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	106829	107422	GCA_000463425_1_1_1366	GCA_000463425_1_1_1366	-	1991156	.	pfam09605	Hypothetical bacterial integral membrane protein (Trep_Strep). This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. It is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.	MNENKLKIKDLVNIGIFSTIYMVVSLLTMILAMFSPIIWLLWPSIAGLVCSFVYMFLVTKVPKRGTALLLSLITGLIYFISGECTWTMLMSFAIVGVLAEITRAITGYKSVKGAVISSGILAMGFIGSPLPMWLFQESYMKSIIDMGMDPKYVSQLKNMISIGSLIGCLALAFVVGMIGGIIGKVILKKHFEKAGLI*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0116	shell	direct	high	593	0.998	GCA_000463425.1_01404
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1347665	1348276	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	107543	108154	GCA_000463425_1_1_1367	GCA_000463425_1_1_1367	-	1991156	.	COG1309	DNA-binding transcriptional regulator, AcrR family [Transcription]. 	MRNKEATIKKILQSANDEFTEHGFEQASVRVIAKNAGVTPGAIYKHFKSKEDIFKAIVSPILNHLYTRNKELTNQAINEIKLNGLECFERKSDNSNEELLRFIYQNFSVFNLLFNCSQGTEYEFIRNDLVNLEVQGAKKLIEALKEKEIEVNELNDDELHILYMMACTPLFEIITHQYSYKNALNFISMMEAAMNFGWGRIIK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0117	shell	direct	high	611	0.998	GCA_000463425.1_01405
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1348356	1350182	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	108234	110060	GCA_000463425_1_1_1368	GCA_000463425_1_1_1368	-	1991156	.	PDB:4BQQ_A	Integrase	MRDFEKITALYERLSRDDELQGESNSIVNQKKILEEYASKNNLSNIIHFTDDGISGTQFDRPGFMAMMNGVNQGNIGCIIVKDMSRLGRDYLKVGQCMEILRQKGVRLIAINDNVDSFYREDDFTPFRNIMNEWYARDTSRKIQSTFKSKGESGKHTASSPPYGYIKDEKDKDKWIVDEKAAEIVRRIFNLTMQGNGPYRIAKILESEKVDIPAYHQQKLGYGLYQSKNFEYPYRWCSSTIASILKKQEYLGHTVNFKTRKHFKDKKSKYVSEDNWLIFENTHEPIIDQETFDNVQRIRGNVKRYPDGWGEYHPLTGLMYCADCGSKMYVHRTSNYKNIPYYVCSNYKKVPCGTLCSSAHRIKAEAVLTLIQETLKDIKKYLDEDNEVFIRSIQNEMEEKEKIEIEKKLTRLIDSKGRLQELERLMCRIYEDMILNKIPNSRYEILNNQYEMEQITLSKEIKDLELAISRYEKETDRARKFISLINRYENFEELTTTTINEFVEKIIVHEKDRKGSQTSKQKIEIYFNFIGNYELPQMKLSEEEKQKLEEEERKINERKDKLHQNYLKRKASGKQKAYEDKYKARREQRKQEKLKAMKRVGIPARDFQ*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0118	shell	direct	high	1826	0.999	GCA_000463425.1_01406
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1350222	1350683	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	110100	110561	GCA_000463425_1_1_1369	GCA_000463425_1_1_1369	-	1991156	.	6JHO_C	Cag pathogenicity island protein (Cag6)	MLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANTKGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPIEEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQYKKYKLAAGVIELRRTLNHYFSEICTS*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0119	shell	direct	high	461	0.998	GCA_000463425.1_01407
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1350758	1350922	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	110636	110800	GCA_000463425_1_1_1370	GCA_000463425_1_1_1370	-	1991156	.	pfam14202	Transposon-encoded protein TnpW. This family of proteins is found in bacteria. Proteins in this family are typically between 54 and 75 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MEEEKRVREEPQHKQLIMDIGKTKYTVNLHFKQGTGETYKDKILKLIKRETEKI*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0120	shell	direct	high	164	0.994	GCA_000463425.1_01408
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1351013	1351450	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	110891	111328	GCA_000463425_1_1_1371	GCA_000463425_1_1_1371	-	1991156	.	.	hypothetical protein	MKKSNLIYGLIYTILAGIFLYLAITFDNKISGIFYGMTGALGANGIFIIIRYFYWQKNKEKYQEKLEIEEIEQNDELKQKLRDKAGKYTYWIGMLIIALSIMVYSVLGVLNIMDTEHIVIYLGAYLISQVFIGVIVFNHLLKKYD*	.	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0121	shell	direct	high	437	0.998	GCA_000463425.1_01409
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1351437	1351658	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	111315	111536	GCA_000463425_1_1_1372	GCA_000463425_1_1_1372	-	1991156	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MRLKNKLDELRKLNGITQEEFAKELRVSRQTISAIENGKYNPSLDLAFEIALYFNMTIEEVFIYEKEENYEKK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0122	shell	direct	high	221	0.995	GCA_000463425.1_01410
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1351738	1353222	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	111616	113100	GCA_000463425_1_1_1373	GCA_000463425_1_1_1373	-	1991156	.	PFAM:PF03389.14	MobA-MobL-family-protein	MAIYHLSIKIISRGKGKSAVAASAYRSGEKIKNEYDGIVHDFTRKGGIAYTEILLPQNAPEEFSNRSVLWNSVEKIEKSKNSQLAREIEIALPKELSREKQIELVRKYVKENFVKVGMCADVALHDKNDGNPHAHILLTMRPLNEDKTWGAKSKKEYILDKNGEKIKLQNGNYKTRKINTTDWNEQEKAEEWRKAWADITNKYLEENSIQEKVDHRSYERQGIEQIPTIHLGVSVIQMEKKGIVTNRGNINREIKHQNKILREIARRIKALMRWIRSLTKDKNNDISKDKQDDMAIQSTTLPKQNDLTDMLSHFIKENSDNNNADLEKYIESYQLLKEKNITSLSELKENIVTLRDKNYKTTRALKNTENEIDEKTQLIDQSEKYLKYKDIYKAYIKLKKSKREDFYSEHTAEIILFESSRKYLKEHLGESKTLNISQWKSELATMKKEKDSLYYQIIDLRKEVEQTEKVKTCIEQLQEQEKQLTQVKRNELEI*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0123	shell	direct	high	1484	0.999	GCA_000463425.1_01411
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1353463	1353783	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	113341	113661	GCA_000463425_1_1_1374	GCA_000463425_1_1_1374	-	1991156	.	pfam12958	Protein of unknown function (DUF3847). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	MKNIDEKILMAEEEIKQLQNKRKKLINQQKQEERKKRDKRLYEKGAVFESIFTESKDFTKDEFYQLISFSTIKEAINQKILKIIEKREQSENKITEIQEEETEIEK*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0124	shell	direct	high	320	0.997	GCA_000463425.1_01412
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1354152	1355822	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	114030	115700	GCA_000463425_1_1_1375	GCA_000463425_1_1_1375	-	1991156	.	PDB:4BQQ_A	Integrase	MSNTKRTGQTALYERLSRDDEMQGESNSITNQKQLLESYAKRNGFVNIYHYTDDGVSGTTFDREGFQKMIKAVEENKVSTVIVKDMSRFGRDYLKVGFYTEILFKEKGVRFIAINNGIDSEKQAESDFTPFLNIMNEWYARDTSRKIQSIFRARMEEGKRVSPSVPYGYYRNPKNKQELLVDKESAKVVKRIYHLVIEGYGVTQIADILTKDKVLIPSAYAEIHYPENNHSSKKRGIDDPYFWTPTTVGYILEKREYMGHNVLGKTICLDYKTKKRRKAKEDELIIFKNTHEAIIDEETWNNAQRLRKTVRRSPKYGTTSHPFTGLLICSDCGGKLSYREPAEHKEKKYDSDYSFVCQHYRHRKGTCSMHYIKVKTVNEILLKSIKEITDFAKEEKQEFLKVMNKLSDEKREEKYQGDKEKLEKLSSRNAELTTLITKLYEDHALGKIPVKHFDRLFNTYDTEQQDLEKQIQYFENEIESYHQRKVDTDKFLKMIEKYTDIEELTVPMINEYIEKVVVHEATGGRQGKNRKQQVDVYFNFIGNCQVQQKTDIEKLA*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0125	shell	direct	high	1670	0.999	GCA_000463425.1_01413
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1355865	1356434	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	115743	116312	GCA_000463425_1_1_1376	GCA_000463425_1_1_1376	-	1991156	.	cd01127	TrwB/TraG/TraD/VirD4 family of bacterial conjugation proteins. The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion (T4S) systems, versatile bacterial secretion systems mediating transport of protein and/or DNA. They are present in gram-negative and gram-positive bacteria, as well as archaea. They form hexameric rings and belong to the RecA-like NTPases superfamily, which also includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases.	MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRAYIGGDIIDKIFQGILELNTMSFLPSIHPADILIGIGVAALIKFIVYTKGKNAKKFRQGKEYGSARWGTKKDIEPYMDEKFQNNILLTQTERLTMNGRPSNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYCVTDPKGLTS*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0126	shell	direct	high	569	0.998	GCA_000463425.1_01414
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1356431	1356880	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	116309	116758	GCA_000463425_1_1_1377	GCA_000463425_1_1_1377	-	1991156	.	PF12687.7	Protein of unknown function (DUF3801)	MEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVKKGQLEEIPVEEAELKELKKELNRYGVKFSVMKDKESGKYSVFFQAKDMKVMDKAFKHALSESEKKTERKESIHKNIEKFKEMAKNSVSKDKVKNKQKEQSL*	hhsuite_tools	hypothetical_protein	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0127	shell	direct	high	449	0.998	GCA_000463425.1_01415
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1356913	1357764	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	116791	117642	GCA_000463425_1_1_1378	GCA_000463425_1_1_1378	-	1991156	.	PDB:4M4W_K	Replicative-helicase	MMKELEKVMIEDVEYSYDPEKEYIKDGHAFCKVCHERKDGKVMEFFDNKMIFKISCKCDRDRDAREKERQKQMEIERLKSSCFNSIIQWSYTFENYQGEENQSLIIAKNFVKDYEEMKKENIGLLFYGSVGSGKTYLACSIANSLIEQYQIGVKIRNFAQIINELQKGGFDFDKNAYIESLVNISVLILDDLGIERDTSYAKEQVYNIVNNRYLKQKPTIFTTNLSYDTIQNCKDSVEYQRIYSRIIEMCIPVMVVGEDFRKVIQKDKLNRNKDRLLNGGEIS*	rep_hall_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0128	shell	direct	high	849	0.996	GCA_000463425.1_01416
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1357761	1358615	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	117639	118493	GCA_000463425_1_1_1379	GCA_000463425_1_1_1379	-	1991156	.	PFAM:PF06970.10	Replication-initiation-factor	MVTKDDREKNYRLFLCKILRKGGEAMDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEGRVFIYFTVEEIMRRRNISKPTAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSILAVKENDFQKSENLTSEVKDFNLRSKENELQEVQNLDSNYIKNNKSKYSKREYSFGENGLGTFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSKEVKTSNIPTWEEYDKGEHL*	common_virus_hmm	common_virus	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0129	shell	direct	moderate	780	0.912	GCA_000463425.1_01417
GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote	cenote	CDS	1358630	1358911	GCA_000463425.1	CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425.1_CP003859.1	GCA_000463425.1|CP003859.1	GCA_000463425_1_1	GCA_000463425_1_1@C88	118508	118789	GCA_000463425_1_1_1380	GCA_000463425_1_1_1380	-	1991156	.	pfam18956	Family of unknown function (DUF5699). 	MRWILKIILFPIRLLLSILTAFLTFLLGIGTTILYFLMLMCIVAAIGSFIQKDISLGIEALVLGFLLSPYGIPMVGATVIAFLKGINEVIKSI*	mmseqs_cdd	nonviral_gene	C88	118789	1240123	1358912	GCA_000463425.1|CP003859.1@region_1240124_1358912@tool_cenote_CDS_0130	shell	direct	high	281	0.996	GCA_000463425.1_01418