core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	29071	29517	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	1	447	GCA_000466585_1_38_34	GCA_000466585_1_38_34	+	346819	.	COG0359	Ribosomal protein L9 [Translation, ribosomal structure and biogenesis]. 	MKVILLADVKNVGKKGEVINASDGYARNFLFPKKLAQEATEANMTVLNQKKEAERRKKLAEIEAAQKLANELKGKEVKINAKSGENGRLFGSITSKDIADAINAQCKINIDKKKVVVDTIRTLGTYEVEVKLYPEVSTKLNVVIVEQK*	mmseqs_cdd	nonviral_gene	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0001	persistent	indirect	.	.	.	GCA_000221605.2_01151
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	29637	31529	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	567	2459	GCA_000466585_1_38_35	GCA_000466585_1_38_35	+	346819	.	PDB:1SXJ_D	Activator-Clamp-Loader	MKSQFKFDYSFDENKLNTVPLESQVDVLFQVVKNVLDEGAMRARITKYKLQKHIHSGDVYKRIYALNRIVSDGKGIDTIPSESNLHEVLNDTNKWIAEAVAKRYVQNEIEKEVEQALIEKQDKYVDEVRLGILRKQKGPENAKTLKKYADLEVLDSKKLTRNIQSMLRPDSFEEIVGQERAIKSLLSKMASPYPQHIILYGPPGVGKTTAARLALEEAKKIKHTPFREDAKFVEVDGTTLRWDPREITNPLLGSVHDPIYQGSKRDLAEIGVPEPKPGLVTEAHGGVLFIDEIGELDEILQNKLLKVLEDKRVEFSSSYYDPDDENTPKYIKYLFDNGAPADFVLIGATTREPYEINPALRSRCTEVYFEPLTAKDIEKIVENAAEKLNVELEAGVAELISRYTIEGRKAVNLLADVYGYVLYSKGQTENVKLEIKDVHEIISIGRLTPYEEVKTENDKEVGHVYGLGVNGYIGSTIEIETAVFEAKDKGTGQVRFNDTAGSMAKDSVFNAASVIRKITDKDIKDYDIHVNVIGGGNIDGPSAGAAITVCIISALLDKPIRQDVAITGEISLRGNVKPVGGIFEKVYGARRKGIKLVVVPKDNLKEVPSGLKDIEVKAVETIEELMDIVF*	common_virus_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0002	persistent	indirect	.	.	.	GCA_006715895.1_00120
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	31561	32895	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	2491	3825	GCA_000466585_1_38_36	GCA_000466585_1_38_36	+	346819	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MDMPLRSLPHNIEAEQWVLGAMLKERTSIAQAVEVLKSEDFYRDAHKVLFSTMVELYQKDTPVDIITLTEALKSSQKLESVGGITYISEVYGTALSTANVKSYIEIVGQKAMLRKLIRASNEIIEDSYNKQDNVEAVMDSAEKKIFNIAEKRNTADFEPMNVVLERGFLEIERLFNNKGQLTGVPSGFNDLDAKTSGFQKGDMVLIAARPSMGKTTFALNLAQHAALRAGKSIAIFSLEMSKEQLAYKLLCAEANVDMLRLRTGNLDDRDWENIARASGPLAAAKIFIDDTAGVSVMEMRSKCRRLKLEHGIDMILIDYLQLMSGSNPENRQQEVSEISRSIKALAKEMGCPVIALSQLSRAPEQRADHRPMLSDLRESGSIEQDADLVMFLYRDEYYNKETEDKNIGECIIAKQRNGPTGTVKLAWLGQYSKFGNLDTVHNDF*	rep_hall_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0003	persistent	indirect	.	.	.	GCA_000525935.1_01387
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	33022	34233	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	3952	5163	GCA_000466585_1_38_37	GCA_000466585_1_38_37	+	346819	.	COG3434	c-di-GMP-related signal transduction protein, contains EAL and HDOD domains [Signal transduction mechanisms]. 	MEVFVARQPILNTNKSVAYYELLFRANKENYYSEVDGDKATLDVITNSFTLIGMKNLTNGKRAFINFTESLLLNETALLLPKDKVVIEILETVTPTDKIIECCKKLKARGYQIALDDFVFRPGYEALIELADYIKVDFLITKGEERKNIIKKISNKNIKFLAEKVETIEDFNEAVNLGYTYFQGYFFSKPTILSAKEMPTSNLYSFELLKFLKEDTFRVDDIENVIKKNVALSYKLLKYINSASLGLRAEVKSIKQALILMGKKELMKWIALVTIRDFTDNSSEAVMDISIVRAKFGEAIAEKINFKSRASEIFIMEMFSNIDVLLNQPMEQALVDLPLADDIKAALLGEENIFKFINDLIFYYENGDLRMLSECSRRLNISEKDISELYTQSLEWATNIMNQ*	mmseqs_cdd	nonviral_gene	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_000018665.1_05336
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	34466	35914	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	5396	6844	GCA_000466585_1_38_38	GCA_000466585_1_38_38	-	346819	.	PDB:1Z19_B	Integrase	MAAIEKRGENSYRLTVSCGYDKSGKKIMKRKTIDLAHIKPNKQEEEANKQWILFKDEVEKGLYLDSGKITFEEFIQKWLKDYAEHELAPKTLFSYKELLNSRIIPALGHIKLNKLQPTHLTEFYNNLRETGIRLDKKYTAKENFADIILKSGMTLNEVLKKANVAKGTLSNLKQHRNISSSVASRISEASGLNLSMLFDLVEKSNALSERTILYHHRLISSILTSAVQWQFIFSNPAARVKPPKVERKEAKHFDVEQVDYIFMLLENEHIKYKTMIYLCIFGGMRAGELNGLEWTDIDWNNNTLRINRASQYLPGTGTFTKSTKNESSERLIALPDIAMSVLRQYKLWQNGERKTLGNLWVDSNRIFTKANGESIFPHTLGKWFSKFIKRHNDTIMRDDNIPKEDKEKYLLDNVNFHGLRHTNATLLIGQGVDIATVSKRLGHAEVSTTLNIYTHTLQKADRSAADKLENLFSKNMQSKKQG*	common_virus_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0005	shell	indirect	.	.	.	GCA_001648245.1_01347
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	35995	36567	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	6925	7497	GCA_000466585_1_38_39	GCA_000466585_1_38_39	-	346819	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MFGDELKKWRKLRKFTQAELGKKVGVSGAYIQQLELGKKTNPSLEVVMNLCSTLEIAPFDLDYGFSNDDICTYFDSRSKYIKEIDKKVELNKNATQEKNGDTLTIYNSKEYIDNHRNLEELSKKYFHSLIEHETSKVEHEEDFFALVLSWLPWDDLDSLPQEQVNEIVNALTLMYKYKLYEFKQANQIEQ*	mmseqs_cdd	nonviral_gene	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0006	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	36715	36909	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	7645	7839	GCA_000466585_1_38_40	GCA_000466585_1_38_40	+	346819	.	PFAM:PF13744.5	transcriptional-repressor	MVEYKLKGKRVAKGIKQGEFAKKLGISAQYLCKIEKCKAEPKRDLMIKIAEILDTPVQELFFEE*	phrogs_hmm	nonviral_gene	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0007	persistent	indirect	.	.	.	GCA_000307025.1_00810
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	36992	37153	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	7922	8083	GCA_000466585_1_38_41	GCA_000466585_1_38_41	+	346819	.	.	hypothetical protein	MSLNVITTDSIEKLDKQIKALESLIPKDNDKDRDIHTKVLKELKTHRKILLNK*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0008	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	37172	37405	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	8102	8335	GCA_000466585_1_38_42	GCA_000466585_1_38_42	+	346819	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MGRKAYLKQAAVELGLTEYQLRRMAKEGKVPFLQSGIKYIFDIELCEESLKSQALENMKKIDEDPIQQYGVLRKVKA*	phrogs_hmm	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	37422	38222	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	8352	9152	GCA_000466585_1_38_43	GCA_000466585_1_38_43	+	346819	.	PFAM:PF09681.9	phage-replisome-organiser	MQEQGWVKVFRTLLDKPIWLQSTPEQKTILITLLLMANHKDKEWEWNGDKFSVKPGQFITSLDGIVKKCGKGISIKNVRTGIDRFEKLEFLTNKSTKTGRLITIVNWGVYQNEDIESGIVTGKEVAKEGQSTGKEAATNKNDNNVKNDNKIINTIPYMEIFNLYLEQEIVKHKSLTEKMKESIRKALNKYTVQEVKLAIFRYGTMYHDNTNSYAKDYCKYAWTLQELLTREKGISEFLDEGGKWIRYNDSQSLKVNQSWEEGFLDG*	rep_hall_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_007004175.1_02127
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	38215	38436	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	9145	9366	GCA_000466585_1_38_44	GCA_000466585_1_38_44	+	346819	.	.	hypothetical protein	MDKDKDSKLVGFLSSIWGNLESIHCTIENLWIQYEVGGEELETIMLAIESVQNKIDLRANTILTEEGKEEKRC*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0011	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	38430	38681	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	9360	9611	GCA_000466585_1_38_45	GCA_000466585_1_38_45	+	346819	.	PF11417.8	Loader and inhibitor of phage G40P	MLSKNVFIDGIERLVLEYKDKGFDMTKEKAEQWYSFMKNMSESEFNRKIDNCLMTCRRSPTMADVLDIKDNPNETQRPQIPYI*	hhsuite_tools	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0012	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	38692	39969	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	9622	10899	GCA_000466585_1_38_46	GCA_000466585_1_38_46	+	346819	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MKFNIEAEMELLGAIIKNSNLMCDAISLDARDFYKDSHKIIFLNMKRMFEEGKVIELTTLASYLGNQLADIGGITYLSELFSHALTKDIKPYVKIIKDKSIVRNLYSSLQKSIKDIEDDKALNEIIDSIQEIAGGINFENMESGDMQAILFKFLDNLENRYKSGGKIPGIKTHIEKLNFLTGGFKKQEFIIVAARPSMGKSVFAINLSSHIAIKEKRYVALFNLEMSKDATVKRMVSNIASLESNKMRDGRLSDGEWVEVGRAVNILNTPYLRIYDNTISLNQIYSTCKKLRIQNKLDIAIIDYLGLIDGVKGENRNQEISKISRKLKMMAKELNITVIALAQLSRAPELRADHRPMLSDLRESGSIEQDGDNVMFLYRDAYYNSDSKDQDIVEIIVAKQRDGNLGTIRCKWMPEYQRICSLYGV*	rep_hall_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0013	cloud	indirect	.	.	.	GCA_000020225.1_01417
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	39975	40145	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	10905	11075	GCA_000466585_1_38_47	GCA_000466585_1_38_47	+	346819	.	.	hypothetical protein	MGKNLEAVIKRVGMKYLEASKPLRITVGEILEGKINAKVQGGKSNEQSAKFKNYKT*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0014	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	40218	41030	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	11148	11960	GCA_000466585_1_38_48	GCA_000466585_1_38_48	+	346819	.	.	hypothetical protein	MYCVIQKVVNKKYDPYGEHKEIEVHSTTWSMNGVSKTHYSYIYGGGRFERPIKDAYKISIHKSYRENGKLKKKQWVICTMGYYSLLHSWPGDCIVRSVLDKKLKDMGITEEELWNMVYIKLQPIINSVKVEFERTEEYKTKQKHKQILDKYLKDKEEFEKRYGKDTYDYCYDVFGTLRNEKYLKEIESNYQAQQTYRNSYSGYQSNKQSNYSDYDFNSYYKTNVSTYTEEEREYLKAIYKAAAMKLHPDIKKDNGEGMKLLNKLKNDWGI*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0015	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	41202	41396	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	12132	12326	GCA_000466585_1_38_49	GCA_000466585_1_38_49	+	346819	.	.	hypothetical protein	MLKYRGKSFEVINQEFKSGYFKGMVCYLKGCKHICIDKDLSPKEKSKILHRLLKTDKKIGWIGY*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0016	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	41409	41531	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	12339	12461	GCA_000466585_1_38_50	GCA_000466585_1_38_50	+	346819	.	2BZB_A	CONSERVED DOMAIN PROTEIN	MVDKLKIELYEYIQLYGLVDERTVVKSQELDLEINKEMIS*	hhsuite_tools	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0017	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	41546	41704	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	12476	12634	GCA_000466585_1_38_51	GCA_000466585_1_38_51	+	346819	.	PF13113.6	Protein of unknown function (DUF3970)	MLKIRITYCNEAEKEGFIDKLKNNFKILEVSKEYQGKGKSLYKKCYIDLSCK*	hhsuite_tools	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0018	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	42545	45118	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	13475	16048	GCA_000466585_1_38_52	GCA_000466585_1_38_52	+	346819	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MSDSVGKISLDLELQGDLGKQINEEAGKIGEQLKASLQNIGNVNFKALADNISNSLKKSIDGSMDAIKGTIEKTLNSALAGATAGTKKIKIPVDFGIPTNSLPQKETAVSSLAQLRAPPIPKINTGVNIDVVKAQIDNLTQSLDITNAKIEQQRQKLAQLRESYDRAFDGSRKNKLQEQILNTEATINKLTAVSDRTGFKLADLDKKFEILGASAKQATSGVAAVTETLKKTSNVSNKAGGNFRAMKRSVDNAGGSFRNSHNSLKMFFGTMVKWGIIFPIISRAIFGMATFLGQAFMANTQFANSLNQIKSNLYTAFMPIYQAVLPAINTLMAGLSRITAYIASFTNALFGKTYNQSFQAAKGLIAAKTEMGAYGNAAKKAAKDAKGALAGFDEINQLQSGKGSNDSSGGIDKVPKMVMPDVDTSALDKSMGGLADKFKTVLGTIFQPFKSAWNAVGPSVTAEFNRAIEGTKATLNNFFNMLATPPVQKFMQSIGELGLTIGKLLLFVYNNYVLPLGNWIISNAPGIASALTPIINNVTNFLNWLMGDGKPILDVIVIVLGSLALAFGVVTTAVKIFNTVTGLISLITSPIGIAVLAVGALIAIGILLYKNWDYLKAKASEVWLGIKVAFAAFSYWLGTVFATDWSEKFGVFGGVVNGLLHSIKDVFSGIKQVFKGIIDFVAGVFTGDWRRAWDGVKEVFSGIVNTFGAIMRAPLNAVIGLINGAISSINKIKVPKIDLPFGMGTVGGWNLSIPKIPYLAKGGVINQPTLAMVGEAGKEAVMPLENNTGWIDSLADKISGRIGASNDVLDVLKQILLKISSQNGDLVLQVGENDLARTAINAINRYQRQAGKTLLNV*	hallmark_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0019	cloud	indirect	.	.	.	GCA_025567495.1_00942
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	45174	45311	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	16104	16241	GCA_000466585_1_38_53	GCA_000466585_1_38_53	+	346819	.	.	hypothetical protein	MELTVQARKARNEYMKNYRKKNPEKIKNINKRYWEKRAVISQCKN*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0020	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	45333	45977	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	16263	16907	GCA_000466585_1_38_54	GCA_000466585_1_38_54	+	346819	.	.	hypothetical protein	MSKKVQLKSLIQQYKAEGDSISKKINELKKSNNFTEDYKKQLIQNEIQKLNAVGQEIKEKASLILNEKIADISKGARTNTQDSNYQLGLANALKLLELGAAELNNNDIKALLEPFAGDRIATAAFKGALTNAGKDNVEILAMLPKDERAHNIKILENMNTNIKEYFNPSREWEGLTGVGMAVAGMEQSLDTLLDDDLSYVQNAPQETTFTAYEK*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0021	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	45998	46549	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	16928	17479	GCA_000466585_1_38_55	GCA_000466585_1_38_55	+	346819	.	.	hypothetical protein	MGLKINLGQVVSNYKQLKDELDNKIKAIQNNGQYSEEYKNELIMQEKAKFSAQKDEIKNSAVSLIEDSKQKLQDKKKSVVKDLAFELRLNNALKTIELGGKFLGKEELKNIIEPFKDDYGTIQSLFQIFRKMNIDTDDIIPTDGIEYQIKDLEDKAKAVIEGITYDNNMGMVIAISMMSDDVE*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0022	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	46566	46937	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	17496	17867	GCA_000466585_1_38_56	GCA_000466585_1_38_56	+	346819	.	.	hypothetical protein	MGISVNEAVTTWNTAAADAETELKALEDTLKADYNKYIDSLSAYLKKINDTNAIRNTYVNVFEKEDIENSTYNKNNFLYSAVPPLQNIGEKYILDNSVEVGQRDSYEIVKAADAEKLLTKKVI*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0023	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	47010	47546	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	17940	18476	GCA_000466585_1_38_57	GCA_000466585_1_38_57	+	346819	.	CDD:pfam03592	Terminase-small-subunit	MAKLSLKQKIFCDEYLIDLNATQAAIRAGYSFSTAKEIGSENLTKPNIRAYIEKAMAERSRRTGINQDRVIRELAKVAFINIADVIDIDNVTVKEDASEDDLAAIASVKVKRYNSENGNSVEREIKFADKLKALELLGKHLGMFKDKIDINASLGIGLEKLNSILEQLRDNKDDLELE*	hallmark_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0024	shell	indirect	.	.	.	GCA_000259915.1_02192
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	47552	48304	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	18482	19234	GCA_000466585_1_38_58	GCA_000466585_1_38_58	+	346819	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MRICELYKEVKHMTNEELVYLYQNGDKQALEAILEKNKGIVNKLCNKFYLDGINSVDREDLEQEGYIGLITAADRYDFKNDKKAQFITYAIHWIYQRMNNYIIKRDTNKETSLNTPTGEDGKTELIDYIEGVDYSFENIEDRIYHKQLRQELEEVMDNYTTLKEREILKLHYGWDSNKCMTLEEIGDIFQVSGERIRQLKTASFRKIRNSPWGMVKAREVFIEKKRKLFYSIPGTIENMNFAERYLKDVM*	common_virus_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0025	persistent	indirect	.	.	.	GCA_902490215.1_01973
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	48304	48687	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	19234	19617	GCA_000466585_1_38_59	GCA_000466585_1_38_59	+	346819	.	PFAM:PF05263.10	transcriptional-regulator	MKREEVINLSEEWLKSVPDLKKRIRLIDVALKKDSYDKGMIEKLQHEKDKLNKKLSRIIKAIGTLEEENQKIICYRYFEGLTYKEIALRVHAGERTVYRRIQNKLLLQVGRIMFGFEDEFWRIFIED*	phrogs_hmm	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0026	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	48859	49503	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	19789	20433	GCA_000466585_1_38_60	GCA_000466585_1_38_60	+	346819	.	.	hypothetical protein	MSKSQSIKKSLKQVCGKTYYTLYKSLYFIIKIMISLRFFIVLMLLCMLFTFINVNSKVLYVILFIDFITLIGLKLIYKPMNDFVAVNRFTGEISMRTALSKNVFKNCKNNNERLDLLCRGFIQGIQLIPSKMRFRDKFYTVTNKSVLDKCEKNFKNIKVDKLKRKIIIEKLFFYSIKDIWNSQKYRFLIMKQSKYNIKFSKGDINKFALDHTQF*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0027	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	49889	50809	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	20819	21739	GCA_000466585_1_38_61	GCA_000466585_1_38_61	+	346819	.	.	hypothetical protein	MDYAYSLEYKDIVDAEKAYELYWEGIISDKQAFICPEPDCNAQITCSNIDKEKRFLKQKPHFRCYGNHKNNCPNDEEKIGVAGFDDGQERKNLGYIDPLVDVLLLKRKEKSPSITNNKPDIDNDYNAIKRRIKSDIETNGSRRSEYVTIMPIVTKFQKYIELGTTSNHYIENQGKNIKYSDMFINLDKGQLEWYSNFNRVHFGKAKVVKVKGKDDHFRLVFTKKLKFKDKEYIPNVYISNKIINSSYRNKKWLDELKELQQTGKEINAFIYGKVKINQVEQKQYFNIDICEAKLDFIDIRYEEENV*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0028	cloud	indirect	.	.	.	GCA_015291885.1_01839
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	50975	52780	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	21905	23710	GCA_000466585_1_38_62	GCA_000466585_1_38_62	+	346819	.	pfam10592	AIPR protein. This family of proteins was identified in as an abortive infection phage resistance protein often found in restriction modification system operons.	MEISHNLEESYIQELISNYLGDESLSTVEKGRRFLEWILYYLFEKTESELEAGNIDEGVIVCDGSNDGSIDAAFRENESLHLIQAKYNTAHSYQAVSSFISDLRALLFDGPLSTQKKELIDIHESIENVEEIIAYYITNSRINDNENDKISRLIESLEGDALINLEGKNLRIRILDISKINDFIDESLYVVPKKVKGKKSPIILEKYFISKENTTIIAEVGLKDLAAFIDKDKEYLFYSNIRNFLGKNKVNKDIEKTYQENPKNFWYFNNGITIVCDDFDKPMELNKGGAKVFITTPQIVNGCQTANTIYRSWKQSDKVQKSQKEGTILVKIIKDTNNKRNEITRFTNSQTAVTGKDFFALEDFHKKLKKDFSELGYTYEIQRKEVTKKKPKGNKIYSYLFDKDFKNSLFAKDVVQAFTAGMHLKPAKARNIGNLVPGGAYYDKLFNDENTPVNPKYYLFPYAIMYYSKNVLKHKEDDKLKSANLLFISIYFRLILEIFKNIELVEEDTENLIDTKEDVIKYIDIIFSNELINRDLLKLSNTIIRNFFKDTLIKKKINENLPRFLKSTVETDPEVVSIIIDKIRDELEDIDIEIYRQAIMS*	mmseqs_cdd	nonviral_gene	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0029	cloud	indirect	.	.	.	GCA_900475315.1_00855
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	52877	53419	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	23807	24349	GCA_000466585_1_38_63	GCA_000466585_1_38_63	-	346819	.	PDB:1Z19_B	Integrase	MRRGELCGLKWENVDLDEGVIYVKNQLQTIENVKQIVPLKTAGSKRKVILLDYTISILKDYKEQQEENKKIYADKYDEENFVLFHVDRTPFDPDYISRNFARWMHPISKELNIPKIRFHDLRHTHATLLLKVGANIKAVSERLGHTSVAMTLNTYSHLLPDMQKDAVRKLGSLLFNKTHS*	common_virus_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0030	shell	indirect	.	.	.	GCA_934838025.1_01570
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	53435	53749	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	24365	24679	GCA_000466585_1_38_64	GCA_000466585_1_38_64	-	346819	.	PDB:1Z19_B	Integrase	MIDTYIIPKIGAITLEKLKPLHIQNFYKSCIEEFRLSGRSALYCHRILHTSLNQAIRWQLIKANPTNMVDKPRKSKPEMKVLDTHEVDMLLNRIKDLSLYMPVF*	common_virus_hmm	common_virus	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0031	cloud	indirect	.	.	.	GCA_029893715.1_01899
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	54099	54467	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	25029	25397	GCA_000466585_1_38_65	GCA_000466585_1_38_65	+	346819	.	.	hypothetical protein	MKRQKRIMYILFMLFVLFIKISIPSANIINNDKNVDQNTQTIASASLHGSNIIDYKQIDNMDVTTLRVNIDERVESIEIYIITICALYFLINNPPRYIEKIIFYIRTVYFNGSKYKENTNTF*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0032	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	54697	54813	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	25627	25743	GCA_000466585_1_38_66	GCA_000466585_1_38_66	+	346819	.	.	hypothetical protein	MNAQDILIAIVLGIFIFGGVYFLAISNKLDKENKKNEK*	.	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0033	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	54872	55537	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	25802	26467	GCA_000466585_1_38_67	GCA_000466585_1_38_67	-	346819	.	PFAM:PF00069.24	protein-kinase;-inhibitor-of-host-transcription;-positively-regulates-RNaseIII;-negatively-on-RNaseE	MIESEKLAQLINNIENNLLIHVKLRSIDTYEPIIAEHIPYPWTLIGSGNYAAVFSHPYYPEAVVKVYGEGRPGIEEEIEVYKKLGSNPAYSECFYHSSNYLILKKLNGITLYDAIKKGFQIPEKIIQDIDNALDYASARGLHPHDVHFKNVMMNNNSGIVVDVSDFCHKEHCTLWEHSKKAYYKIYLPFFYKLHPPVPGFLLNLVRKCYQFYKRTKESKLH*	phrogs_hmm	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0034	persistent	indirect	.	.	.	GCA_003049525.1_03476
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	CDS	55702	55920	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	26632	26850	GCA_000466585_1_38_68	GCA_000466585_1_38_68	+	346819	.	2BZB_A	CONSERVED DOMAIN PROTEIN	MLLENYYVFVIIKIKGGNGMCDLEKLADKIDIVRCEMELAITKAEELTNYDVVLISKKLDKLLNEYDKVRSK*	hhsuite_tools	hypothetical_protein	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_CDS_0035	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	269321	270238	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	1	918	GCA_000466585_1_43_314	GCA_000466585_1_43_314	+	327059	.	TIGR03814	glutaminase A. This family describes the enzyme glutaminase, from a larger family that includes serine-dependent beta-lactamases and penicillin-binding proteins. Many bacteria have two isozymes. This model is based on selected known glutaminases and their homologs within prokaryotes, with the exclusion of highly-derived (long branch) and architecturally varied homologs, so as to achieve conservative assignments. A sharp drop in scores occurs below 250, and cutoffs are set accordingly. The enzyme converts glutamine to glutamate, with the release of ammonia. Members tend to be described as glutaminase A (glsA), where B (glsB) is unknown and may not be homologous (as in Rhizobium etli). Some species have two isozymes that may both be designated A (GlsA1 and GlsA2). [Energy metabolism, Amino acids and amines]	MNKLLEAVIENNKKWTRDGKVATYIPELGKADSDAAGVCIITLDGEEYNGGDHKTKFTIQSISKIITLMLALLDNGRERVFSKVGVEPTADAFNSIINLETKNPQRPLNPMINAGAIATVSLVAGGNSEEVFNRILNFTRKITGNPDININEEVYKSEKETGDRNRALAYFMKSTGVIEQDPEDVLDVYFKQCSIEATCKDIARIGAMLANDGVLPWSGERAVPRNIARIVKTIMVTCGLYDASGQFAVEVGIPAKSGVGGGIVAAIPGRMGIGVYGPALDARGNSIVGIRILEELSRELDLNIF*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0001	persistent	indirect	.	.	.	GCA_000213295.2_01582
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	270263	271408	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	943	2088	GCA_000466585_1_43_315	GCA_000466585_1_43_315	+	327059	.	cd07304	Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway. Chorismate synthase (CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; 1-carboxyvinyl-3-phosphoshikimate phosphate-lyase; E.C. 4.2.3.5) catalyzes the seventh and final step in the shikimate pathway: the conversion of 5- enolpyruvylshikimate-3-phosphate (EPSP) to chorismate, a precursor for the biosynthesis of aromatic compounds. This process has an absolute requirement for reduced FMN as a co-factor which is thought to facilitate cleavage of C-O bonds by transiently donating an electron to the substrate, having no overall change its redox state. Depending on the capacity of these enzymes to regenerate the reduced form of FMN, chorismate synthases are divided into two classes: Enzymes, mostly from plants and eubacteria, that sequester CS from the cellular environment, are monofunctiona,l while those that can generate reduced FMN at the expense of NADPH, such as found in fungi and the ciliated protozoan Euglena gracilis, are bifunctional, having an additional NADPH:FMN oxidoreductase activity. Recently, bifunctionality of the Mycobacterium tuberculosis enzyme (MtCS) was determined by measurements of both chorismate synthase and NADH:FMN oxidoreductase activities. Since shikimate pathway enzymes are present in bacteria, fungi and apicomplexan parasites (such as Toxoplasma gondii, Plasmodium falciparum, and Cryptosporidium parvum) but absent in mammals, they are potentially attractive targets for the development of new therapy against infectious diseases such as tuberculosis (TB).	MLRFLDAGESHGKALISIIEGLPSNININLDYINRELRRRQKGYGRGSRMKIEQDKIEVWSGIRGMVTTGNPITMVIYNKDYDNWKNVLGNQPNQDEIITVPRPGHGDLVGFLKYKTGDIRDVIERTSARETAIRTAVGALCKSVLEELDILIRSKVSSIGTIQDNNINLFDDNNYEIIEESELRCYNKNIEDEMKRQIDICKENGDTIGGSIFISMKGIPIGLGSYTQWDRKLDAVLSFAVISVQGIKAVEFGNGLNKALTGSGFNDEIYYENNKITRKTNNCGGIEAGVSNGENIELKAFMKPIPTIRQSIASIDLKTKTNVVNRYERSDVCGVVPASVVLENVCAYEILKEILNKFPADDFNELKRSIEKYRNEIYTY*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0002	persistent	indirect	.	.	.	GCA_003470675.1_03670
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	271424	274054	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	2104	4734	GCA_000466585_1_43_316	GCA_000466585_1_43_316	+	327059	.	CDD:cd08642	DNA-Polymerase-I	MSKERLIILDGHSLMNRAFYALPPLTNAEGLHTNALYGFTNMLIKMKEEIKPNYIVCTFDRKAPTFRHEEYKEYKAGRKRMPDELAEQFPVLKDLLHLMAIDIFEIDGFEADDLIGTLSKFAEKNGIEVYVVTGDRDALQLASDNIKIVITKKGMSEKEIYDKNRMIEEFGVTPTQFIDVKGLMGDNSDNIPGVPGIGEKTAYKLIQQFGSIENLLQNIDSVSGNKVKQNLTEYSEQAVFSKKLATIITEVPIEIDLDSIKSKDNFDIDGLRQLFFRLQFKSLLDKLPMDDVKKNDELKPSEEAISCEIIDSINELKSLAKELNDVIYFNLEFLDLNVYSKSRISKIYISSDGNNYVINLISLFEKERDETVKTLKEIFENKDLKKVSYDNKAAYLLFNRIGIKIQGLIFDIKVAAYLIDSSKGEYELCNLIGEYLNEDIRKDAEDIHIKQTSYLPMLKKALEQKIKEYDMEKLLYKVEQPLTEVLAAIEAEGFKVDTDKLDELGVKFKKEIEIVQNEIFQLSGEEFNIGSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEELMDKHPIIEKILYYRQLTKLHSTYVEGLKSVIDTDGKIHSSLNQTVTTTGRLSSTEPNLQNIPIKYELGREIRKVFIPNESESIILSADYSQIELRVLAHIADDENLIDAFINHSDIHTKTASEVFKVPLNEVTSLMRSRAKAVNFGIVYGIGDFSLAKDLKITKKEAKNYIDTYFERYPNVKKYMEDIVQQAIEQSFVSTILNRRRYIPEATASNRMVKALGERLAMNTPIQGSAADIIKLAMVNVYRELKQKGLKSTLILQVHDELILNVYKEEREVVEALVKKEMEQVLELKVPLEVDINIGNTWYEAK*	rep_hall_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0003	persistent	indirect	.	.	.	GCA_000176955.1_01238
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	274054	274653	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	4734	5333	GCA_000466585_1_43_317	GCA_000466585_1_43_317	+	327059	.	COG0237	Dephospho-CoA kinase [Coenzyme transport and metabolism]. 	MLKVGLTGGIGSGKSTVSKLFGEKGFPIIDADIISREIYNIYPDINNQIKEKFGDSFFDFDGSLIRKKLGVFVFKDKERVGKLEEITLPYILKEIFNKLEQLQRENNILCIVDAPTLIEVGLHKHMDTNILVWVDLDTQIKRVKLRDNAKEEDIINRINAQLPIDEKKKYVDFIIDNRRSLEYTKEQFEIVLKSLLLMR*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_003968885.1_00657
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	274658	275221	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	5338	5901	GCA_000466585_1_43_318	GCA_000466585_1_43_318	+	327059	.	cd16896	"uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do ""goose-type"" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue."	MKYRNLLRSFVITIIIITALNSLNIVRLFYPLYYSEHIAKYSEKYDLSPCLVAAVIKTESNFRPNAKSPKNAYGLMQITSSTADWAAKEMNIENYSVEMLKEPEFNIRMGCWYLDNLNKEFNDNTDLVLAAYNGGRGNVQKWLSDLNHSKDGKKLYYIPFKETDKYVKRVKVNYNIYKFLYGNRFNE*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_019343495.1_03298
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	275469	275855	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	6149	6535	GCA_000466585_1_43_319	GCA_000466585_1_43_319	+	327059	.	cd01309	Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	MILIKNGTVLTMAGRPIFNGQVLVNEGKIIEIGDNITESEDCEIIDADGGFVMPGIIDAHCHIGMWEEGMGFEGSDGNEITDPATPQLRAIDAINPRDTAFIEAYENGITCVCTGPGSANVIGCIGSL*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0006	shell	indirect	.	.	.	GCA_000158295.2_00402
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	275850	276011	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	6530	6691	GCA_000466585_1_43_320	GCA_000466585_1_43_320	-	327059	.	.	hypothetical protein	MEDKVKFIEACQVHIKITEDNASRVHEILRELIKLGAIKKDDGEFLLCACELL*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0007	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	276106	276309	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	6786	6989	GCA_000466585_1_43_321	GCA_000466585_1_43_321	+	327059	.	PFAM:PF10078.8	transcriptional-regulator	MGVKNRLKEIRMREFMKNSSEFANFIGISLSTYSQIESNKQQGNIETILKISTALNRKVEDIWYLED*	phrogs_hmm	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_026781585.1_01046
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	276520	276678	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	7200	7358	GCA_000466585_1_43_322	GCA_000466585_1_43_322	+	327059	.	.	hypothetical protein	MIGGLDLIIIDACKTFIFPIITNPARLFMFIAPVGLVLSKSLDKAIKERGKR*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	276675	278012	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	7355	8692	GCA_000466585_1_43_323	GCA_000466585_1_43_323	+	327059	.	PDB:2IUS_D	DNA-TRANSLOCASE-FTSK	MITELVIAGLTTYAYRKTKYNHTHKSEHELENRWMAAMIGAGVKNKNEESETYELTQIIPTQYGFCCCVKIPYGLSFGDLIKLKAVIETNLGAICEFEKDKLENYATLKIINNVFKSDYEPVKTKSNEIFLGYKLDGSEYILDLNTNSHILIAGMTGSGKSFLFASILTNLIYYNSKDIDIYLFQVMKGEIDIFRNCPSVKFTSDCENEILIMLKKLSNLIHKRSKQFTELGIKNISQWNKHFPNKRMKRIIIGTEEISFFMNEENEHFLYFTQIVKAGRSVGIHFVGLTQRTTSANLGGNGELKSQLTVITAKQRGEIDSKNAIDVYDAAYLKPQEFIASSNEGLIKFMAPTIDEDFKILNKYVPEIIIPDVKSNKETHKEKPTISGGWHIPNESEWKSIRDTIPEFTYITKEEKIPVGQMKAPKKGKKNGVISLDEVRESVNA*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_018364005.1_01840
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	278005	278589	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	8685	9269	GCA_000466585_1_43_324	GCA_000466585_1_43_324	+	327059	.	PFAM:PF13814.5	replication-initiation-protein	MPRDKQILKFLEENKAVTIFQTYRMWFNEAKFGYDRARVRLKQLEDYGLLRSYKNKLTDEKVYYTDDKVSSHDLFINEFYSLLVFNGCSNIQVKRQPRFMKDLIRPDALFKFEYEGNLYFVLLEVDFTHVTSISKFQLYERLYKTEELQKVCLGVFPLITVISIDESPLKYESDSLDIIYLNDKLDNFKNKILD*	phrogs_hmm	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_018364005.1_01841
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	278908	279414	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	9588	10094	GCA_000466585_1_43_325	GCA_000466585_1_43_325	+	327059	.	.	hypothetical protein	MENLLTKLMIYSVVGTLAIAFIKIGSFYLLHRLTKEKAYQNISKEKLKALKDKKVKQQLELEDILLRKEVEPYYLQAKNLFNNAMKSGNLTREQILYLEKIISESLGEYAHDYMTRHYKNNCHKIYSMLMSSHLSIDDFKRIIQLVKSFEAQGEGLYLTVIDEKELTK*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0012	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	279749	280384	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	10429	11064	GCA_000466585_1_43_326	GCA_000466585_1_43_326	+	327059	.	PDB:1VZ0_A	ParB	MAEEFGERNTYSELPISKLYALLDVSQEEREEFISESHEINGQSKTVDEMTTRELQQAIKAKKEAESKSQQLEQEKLLLAEEKQKLEISENENRKDFSFSEKMQWAEQLKKEYEKIAKENQLSGLNNQTSCDKILPNDKIDSNKQVAEDVGLGNKETYRQAKYIYDNGSKELIKQLDDGQLSINKAYLTLKEEKQQLEISENENRKDFSML*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0013	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	280390	280788	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	11070	11468	GCA_000466585_1_43_327	GCA_000466585_1_43_327	+	327059	.	PFAM:PF02195.17	ParB-like-partition-nuclease	MGKELKEAQEELSKHGYGCFQEWYEFLGFKTTTVYNLINRFNLTHYPNFDENTNTPKEDMILEDLICTNIMQRGVGNVNPMKMARCIVELERIYGIKHGGDRASLNNSNLKSELQKSSNPIKWLVTNIDNEA*	phrogs_hmm	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_013009385.1_02300
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	281267	281566	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	11947	12246	GCA_000466585_1_43_328	GCA_000466585_1_43_328	+	327059	.	.	hypothetical protein	MLITQNNNTGRAVKEQVPRLEQQGQVLDIIADKIGMGSGRTYERAKNVSNKIEELKQNNNSKDAEFLKIMLNDSIRGTEDILKADCLDKISTELKDKVE*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0015	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	281701	282357	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	12381	13037	GCA_000466585_1_43_329	GCA_000466585_1_43_329	+	327059	.	.	hypothetical protein	MIDKYLISTCLFIIDEFNDRFKGISKEKTKEIADTEFTEADLVVRLGYPFKQMANFNMQGTDRDIVVKQKDFIIEVKYLRNFNSYSESSKKKNKTYRSNKTIWEDAFEKDYSWLCNEIKNGKKGNRAFVIGWFNAVNSFSELMQLGESRGCMPEINKERIQLFPFLKYNPQTNKTKDITYAYNRDFKEYSIHIEGHNYEVNCMFLGNSEDIFHFAIYF*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0016	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	282376	282567	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	13056	13247	GCA_000466585_1_43_330	GCA_000466585_1_43_330	-	327059	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MAEQRISQRELAQLTGIRQPSISAYCTDSFKMIPKEHIDIFCKFFNCKIEDLIEYVQEEKAEG*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_000238135.1_01309
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	282747	283073	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	13427	13753	GCA_000466585_1_43_331	GCA_000466585_1_43_331	+	327059	.	.	hypothetical protein	MSNKTMDLLKEMDSVNFAKELDKLEGKYITINVEGEISTLYSIESFNYSILEGKVIVEDWLVIEDDNAPDEYILRICLETVAAYQKDLISDALILVTDGGMVIQFQEC*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0018	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	283083	283247	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	13763	13927	GCA_000466585_1_43_332	GCA_000466585_1_43_332	+	327059	.	.	hypothetical protein	MCKVIQFPKQYNESQEGMDKLYEMYYSDPANYMLDPNEWDDFLKDFNNKHKKTM*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0019	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	283617	283823	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	14297	14503	GCA_000466585_1_43_333	GCA_000466585_1_43_333	+	327059	.	.	hypothetical protein	MEYVIKNPRLREYLYKLGFDYREVSDKTGKQDYVWLFKNTTELLEAITFYTTLKNKLKISKNTYTPKI*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0020	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	284035	285276	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	14715	15956	GCA_000466585_1_43_334	GCA_000466585_1_43_334	+	327059	.	.	hypothetical protein	MNDNNDNKIYFSKIPNSLFYSYLDKKLKKEIKSIFPQIKDEKVLLVFDYLYTNTNRKGIINFTLENMVVQCGFKCSTKKGEMNDQFKNILNKLHISKIINSNIDFKDIKPKDFVSCTYLINLDNSFITLYDSEKNIVLNQSFEKCDNLKLLMYYCYLKARMYKRSNDDAMEKNGGRAEVAYPTYNTISDDLGLTDETIKKYNDLLVKLNLIRVGSAGNWYYKDDKNKILRESCNIYTLLIDSDEVKAKFNLKEGIKYYKSLDINSNKVFTNSKAYKNNDRKLNGELGSIIKKENKGTATEEDIARKNEIIASINADAELYKIKALLEANDGTLLSEIYENLGKDDLAKKYSNIELKLGLVDFEFNLEVDWDYYCYIITNYKENEHEKFKNYVRKHKRDNGLDSDLYENIEDLL*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0021	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	285289	288027	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	15969	18707	GCA_000466585_1_43_335	GCA_000466585_1_43_335	+	327059	.	5FSW_A	RNA DEPENDENT RNA POLYMERASE QDE-1	MENGIKIINIEGSEILKEMDGKEIIKEYKTVLPYSLVTAKLNRMHIKIKDNKSKDFIGVNFNYGYDTEKLKDLRSRIQSQKARVKDLNKKVTIAKKDCDYEEEEEILEQLQIENILLEELEENYKSEKLAWNKDGIREKLYRDGFTLVHKHVKKHKETNNEGKEITREEVVEEKIFYKYWFRTPAKSRVGDSIFINKNLYDEITKWQDMGLTLPAGETKVVEFQAYRSLTASNIEDTIEINTKHILVVNDLESYMDTNIISVELNNSGECVAVPRKDKVKNILWDGMALLDSSCFAEGHNFYLLRNHFFKSCAFNANVVQFLKDKYGAEYENAQVKDRYGNNIRVKNIRMITTENSMKWEKFAECGAVGKDGIEITSNKQMFGYWKQMVKNDRYLFGICKHNHSSKYGKHQRMSYQMVNTLLLNQEQTQELAQYTIDYINNLKDNDEAFIKMLKETATDGNNNNLYIDLYNKNQLFKESDMYKRFKTETIASIKKRARQAKLLVEGDNLTVCGNPYLLLLHAVGEVPNKDNVIIERFTDVTLPISSDYISCYTQRFAEGEELTGFRNPHNAPNNIALFQNFKHELMQKYFIFGTNVIAVNLVQTELQDLANGLDEDSDFLLCTNNKVSLQATKKVFRNKDYACIVNNIPKDTKKWINDNSSVAMIDNLLAKSKNSIGVTSNLAQLALSFYQQEQTQELRDIVCIMSCLAQVSIDNAKKSYAIDIEKEIDRIKKLECIKKYKGMLPGWFKYIKKDVNAKRLLEPNKCKCTMQYLQAVINTIKNNTNNKENLDTVELLQDIKINGKTNYAQIQKIEKLVEAYDKKVKYVKKQAEKHDWKADRIEEEIRDTRDSIISRIGNLKLTEETMYYLVKNAIVNEELEDKEKESDTKKCKRKMLNVLYNTHKDLFISVWK*	hhsuite_tools	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0022	cloud	indirect	.	.	.	GCA_022784125.1_02066
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	288405	288884	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	19085	19564	GCA_000466585_1_43_336	GCA_000466585_1_43_336	+	327059	.	.	hypothetical protein	MNNELKEFERLLNQDWMMKEEGYSFKILKDKTNNEADEIVDVITMQVFTDDELLYTYSTAQIFGTLEENIKSIIGAIYNEDINYRKRIIRNYKGSFLSRKIKSLNNAIAKGNTDKVNAINMEIIEKYKQSEKCKNELVEFKSFISLLYRTKDLLISKVA*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0023	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	288900	289226	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	19580	19906	GCA_000466585_1_43_337	GCA_000466585_1_43_337	+	327059	.	.	hypothetical protein	MIKFKPSEFQYIQSELKKLLYDNDEGCVLMRKGLTKEDIVDIQHFINTVDKVNVNEDENKKFIHVIIEHLGMWCFVDAEYTYNELLQLIKDRQYCNLYNKLILDKEEE*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0024	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	289293	289550	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	19973	20230	GCA_000466585_1_43_338	GCA_000466585_1_43_338	+	327059	.	.	hypothetical protein	MGKLFSKKQKKEISEQLQEISNDWKDIAKKWKEVKLISLQMKISNLLFIAKLEEDRKKLDDILEELHECIRKYNELLDEVYGLSS*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0025	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	289601	290206	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	20281	20886	GCA_000466585_1_43_339	GCA_000466585_1_43_339	+	327059	.	cd10437	N-terminal catalytic domain of GIY-YIG intron endonuclease I-TevI, I-BmoI, I-BanI, I-BthII and similar proteins. I-TevI is a site-specific GIY-YIG homing endonuclease encoded within the group I intron of the thymidylate synthase gene (td) from Escherichia coli phage T4. It functions as an endonuclease that catalyzes the first step in intron homing by generating a double-strand break in the intronless td allele within a sequence designated the homing site. I-TevI recognizes its extensive 37 base pair DNA target in a site-specific, but sequence-tolerant manner. The cleavage site is located at 23 (upper strand) and 25 (lower strand) nucleotides upstream of the intron insertion site. A divalent cation, such as Mg2+, is required for the catalysis. I-TevI also acts as a repressor of its own transcription. It binds an operator that is located upstream of the I-TevI coding sequence and overlaps the T4 late promoter, which drives I-TevI expression from within the td intron. I-TevI binds the homing sites and the operator with the same affinity, but cleaves the homing site more efficiently than the operator. I-TevI consists of an N-terminal catalytic domain, containing the GIY-YIG motif, and a C-terminal DNA-binding domain that binds DNA as a monomer, joined by a flexible linker. The C-terminal domain includes three subdomains: a zinc finger, a minor-groove binding alpha-helix (NUMOD3, nuclease-associated modular domain 3), and a helix-turn-helix domain (HTH). The last two are responsible for DNA-binding. The zinc finger is part of the linker and not required for DNA-binding. It is implicated as a distance sensor to constrain the catalytic domain to cleave the homing site at a fixed position. None of other GIY-YIG endonucleases have been found to have the zinc finger motif. This family also includes a reduced activity isoschizomer of I-TevI, I-BmoI, which is encoded within the group I intron of the thymidylate synthase (TS) gene (thyA) from Bacillus mojavensis. I-BmoI catalyzes the first step in intron homing by generating a double-strand break in the intronless td allele within a sequence designated the homing site in the presence of a divalent cation cofactor, such as Mg2+. In the absence of Mg2+, I-Bmol only nicks one of the strands. Both I-BmoI and I-TevI bind a homologous stretch of TS-encoding DNA as monomers, but use different strategies to distinguish intronless from intron-containing substrates. I-TevI recognizes substrates at the level of DNA-binding. However, I-BmoI binds both intron-containing and intronless TS-encoding substrates, but efficiently cleaves only intronless substrate. Afterwards they cleave their respective intronless substrates in the same positions, and both require a critical G-C base pair adjacent to the top strand site for efficient cleavage. The C-terminal domain of I-BmoI has nuclease-associated modular DNA-binding domains (NUMODs), but lacks the zinc finger, which is different from that of I-TevI. Although the zinc finger implicated as a distance determination in I-TevI is absent, I-BmoI still possesses some cleavage distance discrimination. Besides I-TevI and I-BmoI, this family contains a putative GIY-YIG homing endonuclease, I-BanI, encoded within the self-splicing group I intron of nrdE gene from Bacillus anthracis. It contains two major domains, the N-terminal GIY-YIG domain and the C-terminal DNA-binding domain that consists of a minor-groove DNA binding alpha-helix motif and a helix-turn-helix (HTH) motif. I-BanI generates a double-strand break (DSB) in the intronless nrdE gene. The cleavage site is located at 5 and 7 nucleotides upstream of the intron insertion site, with 2-nucleotide 3' extensions. The recognition site is 35 to 40 base pairs and covers the cleavage site with a bias toward the downstream region including the (intervening sequence) IVS insertion site. Moreover, this family contains another putative GIY-YIG homing endonuclease, I-BthII, encoded within the self-splicing group I intron of nrdF gene from Bacillus thuringiensis ssp. pakistani. It contains a GIY-YIG motif that generates a double-strand break (DSB) in the intronless nrdF gene. The cleavage site is located at 7 and 9 nucleotides upstream of the intron insertion site, leaving 2-nucleotide 3' extensions. The recognition site is 27 to 29 base pairs with the DSB cleavage site at the 5'-end of the top strand, and with the intervening sequence (IVS) insertion site approximately in the middle of the recognition site.	MCKKRIDGVYLIKNIVTGKVRIGSAKNVPKRFSNYKARLRNGNGNKLMQEDYNWYGEKSFDFILLEECKVKDLYLRERYYLELYKDCAMYNKNAIKNCEKKIRRGKEAKKYKEKRSAVTSGENNGHNTKLSKVKVFDILNMDSKGIDRKNIAEKYEIRTSYISRIGKDRWVKEFNEWKENNKDASTVIDTPLVNTLQSIQM*	mmseqs_cdd	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0026	cloud	indirect	.	.	.	GCA_003862485.1_00034
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	290298	290561	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	20978	21241	GCA_000466585_1_43_340	GCA_000466585_1_43_340	+	327059	.	.	hypothetical protein	MDKDENKIYTQSIRCAAFITYSIGEFPTIKAFDKGNTFVFDKSLKALKALNTYKKSQYNKDVLMGDLNAYDDICKQLKRMCKEHVGA*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0027	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	290737	291069	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	21417	21749	GCA_000466585_1_43_341	GCA_000466585_1_43_341	+	327059	.	.	hypothetical protein	MDEIIHILREQCFNSNLSEVVGEINRILRGRRHDKIDVERSYINSNHIIPPTIDNNISHIDGMIILRTGESKYIYINQYELREALGESYLESSKEKIKDTILKIIEDKCK*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0028	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	291150	291314	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	21830	21994	GCA_000466585_1_43_342	GCA_000466585_1_43_342	+	327059	.	.	hypothetical protein	MRIIIIDVEDDIRINNRRPRVKIRRPLPKGIMLEPLVVEPIRVRPINAVSRIII*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0029	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	291374	292078	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	22054	22758	GCA_000466585_1_43_343	GCA_000466585_1_43_343	+	327059	.	.	hypothetical protein	MGLYRRIKLISMDYIYNSHRSEKIIKKYNELYICNFDNKNYTYYKDNLEDLIGDIKTKYNTKINQDKSKLITERNKMQHLYDNTYFFDGNNLFVGVISIVASFLIGRYAQNGTETQIGGIVLFLEAILIGSIVIMVVTKRDMVSYTEKKAFYNLCLRILDDIEKEIEPKNQIRKENDEVSVGIETENQRKLAKPSSGQTNGNWNVEINMLSLLDAVGAIYKVSKIAKKMFRKKK*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0030	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	292099	292530	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	22779	23210	GCA_000466585_1_43_344	GCA_000466585_1_43_344	+	327059	.	.	hypothetical protein	MKNFRNEAYGSYVDYDYLISEKFQKELIEALGIKQGDKVYISRDKSNGQYVLNSEIPFDYLISYSGAKEPHTNKFHATTIYNPCVIQMINNIEKFGENNIFVTLYFHEINITIPEIDRAKADFKDKIYRYYGIEINNVGYSWN*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0031	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	292642	293049	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	23322	23729	GCA_000466585_1_43_345	GCA_000466585_1_43_345	+	327059	.	PFAM:PF00292.17	terminase-small-subunit	MLDEAKINCIEYLVAGVEKTEIAKLIGKSRQAIYDWINKDDEFKAELAKRLRERKTEATRKINNKLPQAIDKIWYLIENAQSEKVKSDLLKYWIDRELGTPTSKIADVTEETTEDISNGDLEQEFNKFKVLKKAE*	phrogs_hmm	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0032	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	293402	294007	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	24082	24687	GCA_000466585_1_43_346	GCA_000466585_1_43_346	+	327059	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MGIIYGYARCSTDESKQDIEYQVRELKKMGAIKENIYLEYESGTKVDRVEFSKMLNAVSKGDIIVTTEVSRLTRSTKQLCDVIELVQKKCLKLIIGKSMTIDCTNGELDPMTKAFVQMSGVFAELERNMISQRVKLGMANAAAKGKVIGRPSTTKEDIPNIFYKHYPKYKNKQINASEFSRLCDMSRTTLYKYLKIVESTE*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0033	cloud	indirect	.	.	.	GCA_025398895.1_02181
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	294141	295757	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	24821	26437	GCA_000466585_1_43_347	GCA_000466585_1_43_347	+	327059	.	PDB:4BIL_D	Large-Terminase	MHGASEEQADQATQELMLKNKDNLFNYHGLAYALGSRNLEFFSLYFLQNIFIGEDKADIAEIHRDIWEEIQGMILEDTHDKQEYVLPRGTGKSTFVSLVTAIWCSVYKYKRYTVIASAIGDTASTFIRNIKLALENNDRIEKAFGKLYDTKKCIVNSEQIELTNRTMIQSISASSTLRGKSYGNTRIELLLLDDYQKDDEVATADQREKKWKRFSDDVKFAVQKGNSTIIAVGTLQNNECFYSRLKNLPTWKHRLEKGVLVDNVDELFSSGLWLEFKNILFNSKDEFRLDNAKEFYLQHEKEMQYPLLWQEYWNCLDMALSYYENPASFKQEVQGDTAAIGEKRFKTIVTESAETIETHDFKVTMLTIDPASSTGKSNDYSAFIVGSKSDNNIKYCRKGEILKLNFDDYINHAIDLLKKYSDITHIYIEKNLYMGADVIKLKELIANDDELRNRNFTFINEMQKKNKFDKIDSIVGDINFGRVIFNEEDIEALEQLKDYQGEKSLHDDFPDCLAECVIRLDTLETISTITLLDRKLFF*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0034	cloud	indirect	.	.	.	GCA_001808875.1_00778
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	295773	297047	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	26453	27727	GCA_000466585_1_43_348	GCA_000466585_1_43_348	+	327059	.	CDD:pfam05133	Portal-protein	MDITIDLLQKCYKEYQLNKPTYDKMYEYFKGNTDAIANYKMQTERTNNKINTNFIKKFIKEEVSYSVGNEITYISRSGNKDIINDIEYYTEHWSENHDSNLAKNMLLYSLAYEVYYVDDEGQFSSKIISPRDGYAAIDDFGNISFFMHVFKLKFDDTTYIDLYTDNEIIHYNSDFKEVKPRTQLIFGAVPVGLAQLSEEKQEDTIYKDIKGLQDAYETNLSDISNEISDFRNAYMVLSGVQIPEEDIPKMKQLGVLQIKGKDGKAEWLIKNINDQFIQNTLSTLEDKMYQLSSHINHNIDMVSNLSGVALRSRLISLEEKCKLNQKALADCVKTRLKMLFIYLKVLKNKDYDYKDIKIKFTPNIPQDDLMTAQTISQLGDKLSTETGLSLLSFIDNPTNELAKIKQEQSELLQGQSLLDGAVNG*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0035	cloud	indirect	.	.	.	GCA_028861895.1_04356
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	297040	297915	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	27720	28595	GCA_000466585_1_43_349	GCA_000466585_1_43_349	+	327059	.	PFAM:PF06152.10	minor-capsid-protein	MDKQYEEMNLQFTEKGLNKADESTKEAYKFQVKHRDELLFKIANVLLIYTILDSSLSLSNTEKLKLRADFATIISNIAVDEYNQEKSIISDILEEVTNDKYYSDAYTLSIGMDFSLKKLTDKQIKDIVDTSIDGELWSDRLWNNKKELESTLKLEVEKFLQGKTNVNQINKVIKDRFSQNAYNTRRLVQTEAARCQNSSNELFAEEHGIEKQMFCATLDNKTSEICRGYDGQVFDINDNNKPVPPLHPFCRSCLINVPFKEWQPIKRKDNSTKEIINYKDYNQWKQDKGIE*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0036	cloud	indirect	.	.	.	GCA_018373565.1_01960
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	297996	298631	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	28676	29311	GCA_000466585_1_43_350	GCA_000466585_1_43_350	+	327059	.	PDB:6B0X_d	capsid-scaffolding-protein	MLKKELLKLIEKIEDEGSIDEVLSGSDFAKSLLNSGLTLDAFKEKLKADKDFKAFLDSEKDKHSSKSLETWKQNNLEKLLDEEVKKRFPEQDPKDTELAKLKAEIDKMQKESLRKDLTNKAIKIATDKKLPVDLVDFLIGQDEETTTKNLEKLESVFGTHVESLVQERLKGNSYTPPTNTNTNTTTYEDLVKNADNMTSAQVAEMFSKIGK*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0037	cloud	indirect	.	.	.	GCA_022486405.1_00519
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	298718	299527	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	29398	30207	GCA_000466585_1_43_351	GCA_000466585_1_43_351	+	327059	.	PDB:8E16_C	Major-Capsid-Protein	MAVANFKKTLWEGALLANFHSVSIADVITTKPSSTDGEKIIFNRVGAGTLKDYTGSIAWDEITTTPVEMTFGQKKYFAFSLDDVDKAQLVADVMTATTKEHSAVLSETIDGYVLGKAIAGVKTANYPTKTTAKSITKVTDAYDSIVDLGTLLGKSKVPMTDRYAVINNDYLNLLQKDDRFTRNPEVLANGIVNNAKINGMTIIISEEVPTGKVVALHKSATGYAKQISELEAMRLQTAFADGVRGLTVYDSVVLRPEAIAVLNYTIALV*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0038	cloud	indirect	.	.	.	GCA_001937385.1_00062
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	299582	299902	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	30262	30582	GCA_000466585_1_43_352	GCA_000466585_1_43_352	+	327059	.	PDB:5A21_D	head-to-tail-adaptor	MIIDDIKTLLDIQDNSKDNIFNIYIRRATTVIQNYLNNSTFTGEYIETNFPDAIIDIVVNAYNFKGKNNIKSITQGARSVTYSDNTAFCVTESVANMLPTPYLRMC*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0039	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	299904	300203	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	30584	30883	GCA_000466585_1_43_353	GCA_000466585_1_43_353	+	327059	.	PFAM:PF10665.8	Minor-capsid-protein	MFYDKKVGIHNKTEGTKVNGVYIPGKLQWVKDIYVDIQPYSTALLLKDYGYNIEVTKRIFSDIEANIKIGTILKYNLDEYEVRKIIPWDDYMEVMCYGV*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0040	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	300193	300531	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	30873	31211	GCA_000466585_1_43_354	GCA_000466585_1_43_354	+	327059	.	PFAM:PF04883.11	putative-tail-component	MGYKSYKNEVISKLKDAEKQVLDTIGTFIIAEAQLRTTVDTGNLRRSETFETDIGEKKVTVGVTPEAPYGIYVEKGTSKQKAQPFLEPAVMDNLSKLEQIAGEKISVNMDGE*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0041	cloud	indirect	.	.	.	GCA_008727815.1_00737
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	300533	300907	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	31213	31587	GCA_000466585_1_43_355	GCA_000466585_1_43_355	+	327059	.	PFAM:PF05657.10	tail-component	MLELYELINSNIESICSCYADHYPEDLEKAYPYAEISFPNISPNNTFSNLNLLQIDIWDDKSTDIREIEGIADEIDKRIKKLQINNDTMQVCIYRNNPYRLKLNDPEVHIQRRQLRYIVRVYYK*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0042	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	300925	301494	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	31605	32174	GCA_000466585_1_43_356	GCA_000466585_1_43_356	+	327059	.	Uniprot:D3W0E4_9CAUD	major-tail-protein	MAENSTNTVGYTASTPNHLIIDSGALYKNYGIVGKEALIGATSGGNELNITVKTRDVKCDGVKGNVKGLRMITDTEVTLKTNMLEVTTDILKMALLGQVDSTTNADYDLITGKTYIADTDYLDNIALVGKLSGSQKPVIIILKNVLNTDGLKFKTEDDKDNVLPVTFTAFIDPLTPNVLPYEIRFPKMA*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0043	cloud	indirect	.	.	.	GCA_022069325.1_01078
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	301553	301888	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	32233	32568	GCA_000466585_1_43_357	GCA_000466585_1_43_357	+	327059	.	.	hypothetical protein	MRKLETSDLFSLTRILKKMNIKDEIKSLVKDVTGLNDEEKKKAEQALQIELVWLFVENIGNAEKEIYKFLADLTGMKTEEIKHLEPNKFMALIEELFQQDSLGSFFSMALK*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0044	cloud	indirect	.	.	.	GCA_003942765.1_00410
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	301954	302199	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	32634	32879	GCA_000466585_1_43_358	GCA_000466585_1_43_358	+	327059	.	.	hypothetical protein	MNIEDGLELIKTAYLKQAEERLWQQWLAERPYFETFVSFEEYKKKALKTNIKTENNKNDIKKIIEEAEKIKNADTKRGGNS*	.	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0045	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	302199	304094	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	32879	34774	GCA_000466585_1_43_359	GCA_000466585_1_43_359	+	327059	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MKIFSLFGEILLKDNGTTNKLDEIDKKAKGTSKSFDDSFSKIKSSALKVGSVLLGGLGIKELVTKTYQFAESASDLGEAQNVVESTFKKSAKSILEWTNTTAKSAGISKTSSMQWSGFMGAMLKSSGVTEESSAKMSKSLVQLTGDMSSFYNIGTSEMWEKIRSGISGEVEPLRALGINMSVANLEAYALAEGIKKPYKEMSQGEQTQLRYNYLMKVTKDAQGDFSKTLGSSFANQVRVAKMNMEDLGRSIGSVVLPYFMKGVTFINENMPKIKEVINGSVNGIIGTVKFVIPKFEEWIKLIRQIASELLPSFGGSSKEVQGKVTDLAKNGLNFITEALTWLKDNIGVVKAGIIGLSTVWAIQKGILLAHNIALVAHNVQMGVKKGLDIFETAQIKALYIQEGIRNGVTWGAVAAQKALNLVMSLNPISLVIIAIGALIAIGVVLYNKSATFRNFVNNLWGDLKSFAKSIPEHFENMKKGVIDKFESIHNKIEEIKNKIKQKIKDMFTFEPPHFKLPHLSLSGKLSLVPPSVPDFSVKWYAKGTDYFQGGLAGINEAGGEIVNLPRGSQIIPHDISMEIAKNRTNNKTEIVFILPDKREVARYIVDPMSEELANKDNRENFTFNMGGVLNG*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0046	shell	indirect	.	.	.	GCA_000213955.1_00493
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	304087	304767	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	34767	35447	GCA_000466585_1_43_360	GCA_000466585_1_43_360	+	327059	.	PDB:2X8K_A	Distal-Tail-Protein	MDSFIWKGQDSWLDYGIVVNERPPFVKAEKQTEEIPVLGRDGSLTVDYESYKNINLPMKCTLLDNKNIDNVKAWLDGYGDLIFSWIPNKKYIGKMVQQIDIEASLEKEGEFPLNWRCQPFLYLLDNSIITLTQPSSIFNQGTYTSQPIFTIYGQGNITLTVNSKSIYLTDVQDYIIVDGVSGDCKEVKLCNSKINGKPPAFMLGENIITWQGNVTKIDIQPNWRCL*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0047	cloud	indirect	.	.	.	GCA_900445105.1_00891
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	304813	306897	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	35493	37577	GCA_000466585_1_43_361	GCA_000466585_1_43_361	+	327059	.	PFAM:PF10651.8	Baseplate-component	MEIIREIIFDIDKNIYTKIDAKQNDVNSRFIRFTLTNSGLALNLTGHTVKIFAVKADSTLIFNNVTIENAVNGKVLVELTSQALAVAGDLACELAIYGADNSILSSKQFTINVIQSIRNDSAIESSNEFTALTDGITKLNQWDSQFQQKYDGLNTQYAQQLTKNTNDILSTSNKIGILTNLNTQNKTDLVGAINENVASLNDIVLQTAKINDGHLVNIKTSSFPVLTANRRGATKKKSNIQILCLGDSHGWGQGASGYDNGDAYFNVHQQYPYSNGFFDILRKHIEEKLDWYKNSLIFTTGLQNTAPDTSTFNFEGIESINRINHNWKIISGVYGYWNTPKLGTSIDDWFFSLNEFGYETARQKLYDGVMSMARDTNEKAEFVLDMENHAQRVYIGLCRDSSSAKMKISLRDNNMGALEQNLEGYSSKSNYFYGQPSGYPLVYTVQNGIHTPLPTSEYTIDNTGIVIDTYSNTTTSFDCIYCIDFGSKQKARLVVQIAGQNANATANAALALRGIIFDANNIINASMGGHTTGAWLGTEASFSGETNPHIDTLLQSIPFTPTLAIIQAPIVNEYLNQTPLATFTSNLTTVINKLNNHKSDGSKKMDVLFLTTLGNKAKEYLGEAQSAIKYENYFNALKNYCVTNNYGLIDCDSYFKNLAKNMDYELFYDDDNHPSAYANDVIGKELIRTIDMLI*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0048	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	307061	308737	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	37741	39417	GCA_000466585_1_43_362	GCA_000466585_1_43_362	+	327059	.	PDB:3GS9_A	tail-protein	MIIIYDSKETNFNNNGLGLLDNIAKSCRATYSLNGEKYLEIEVIKDEDEKYKWIQEFCIIKADDDLFRLYNKQNIQNNTLSVRAVLQHISNDINTDFIEDSRAENTTVDVALQKVVLDKRFNVLKSDMTNLNTAYFVKDKPLPALKDKIIGRWGGELYRKNFDIGIFSRIGKDTEIQLEYAKDITGFEQSIDWTGMTTRMMPTGKDGITIEPFNGGSKWIESPRINSYFKPLVNEVKFEDIEDSGVLKTEAEKLWGTIDIPKVNYKVNFISLQNTVEYKNDKAYQQLEQLNEGDSVRIKHIPFDCNITARVIKVVRDCITGRNIEIELGQFKENYIDKVNNIKYNVQNVSADLQETKQDLENAKVEFKQTTDGIEQTVSQKIDGEEAKTIISQSAKEVRAAINNTHYSFTEDAFTIGNTNIGDNVEHTPTYSKYKHNDGSYTKIDADGINRYVAGNKENYHYLMVTGEDTTYPSNDRFKTVQLPDEFKGKDFKVSVEAKRTVTTETNVLLSYFECSKYSVDYVNATFTVYGSCWYAKTTNLTDVTNRGWMDFSYIAIA*	hallmark_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0049	cloud	indirect	.	.	.	GCA_019930045.1_00527
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	308794	309036	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	39474	39716	GCA_000466585_1_43_363	GCA_000466585_1_43_363	+	327059	.	PFAM:PF10779.8	hemolysin	MEENYCKEKHKYIDARLDEHEELLKEHTKDISILKEDSREYKIEIKNLIKKMDDFMTTIRWGLGIFVTVSIFVIGILLKK*	phrogs_hmm	hypothetical_protein	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0050	cloud	indirect	.	.	.	GCA_000238115.1_00605
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	309049	309852	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	39729	40532	GCA_000466585_1_43_364	GCA_000466585_1_43_364	+	327059	.	PDB:1M0D_D	endodeoxyribonuclease-I	MNIINSNLQFKGLSYGNNPDLILLHHAEASSCTVYDIHNWHLARGWAGCGYHYFVRKDGSIYTGRPENAIGAHCPNVNSHSIGICAEGAYMIEAMPEIQKQAIIDLCKYIKGKYNIQKILGHKEVPYPTDCPGINYPLDEIRDAVMNNISQPIEQSKPQTQDSEWIRSIQHLCNQLGIKGANGLPLDEDNIFGRNTEYAIKQLPVAKIQGYHNDLYTRWIQKRLGISVDGIFYKECDKAVRDYQASHGLSVDGQVGFNTIRRMIGVI*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0051	persistent	indirect	.	.	.	GCA_000017405.1_01853
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	309867	310079	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	40547	40759	GCA_000466585_1_43_365	GCA_000466585_1_43_365	+	327059	.	PFAM:PF04531.12	Phage_holin_1	MDRFKNYGLWVSVFALIGLILGNYGLYSKLGLNADSYKQIVDAILTVFVMAGIVNNPTSGQGYLDNKQNK*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0052	persistent	indirect	.	.	.	GCA_000019045.1_02414
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	310107	311903	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	40787	42583	GCA_000466585_1_43_366	GCA_000466585_1_43_366	+	327059	.	PDB:4BQQ_A	Integrase	MGYLNDMGYLFFCLYFHKNTIDKNLPKCIIIYNKHRKVRKMKKCVAYCRVSTNSEEQEESYLHQKQYFEELLTKQNGFELIDIYADKGTGTSFKREGFQKMLYDAGLDIEYKKGEINFYVSRREPKFNYIYVKENSRFARNIEVVSIIRKLKEKGVYIVFIDLSKNTENEEDTMMLQFFYSMAQEESRKISSRVKFGKYQAAKNGKIHLTGGIYGYECDFKSNALRAIPDEAEVIKLIYNLAEENNGVRKIKKYLDENGYSRNGKKFTEHFLLYALQNKKYCGYNIRNVYDKPDILNKYKQIKKDESEWIIEKSDRIDVIITEEQFNKVQELISRRRTHKPDGKSLGYKASKSDLAGKIICGECGGKYISNREVYSNGRVREFYNCNVKKKKGTKYCKNKNIDKIEIEVQIEVWRNGFYKKYFDSEREETIKKLILKQQEIENLKDLNKIKDIENIKNEISEYENKLSNLLDNMIEEQSDTLKRVYKNKIENMENEIKVLEEKLKALESSEQEREEKIKNINVFIEALNMKKMDVKEKMTREEFLEEADFVIKEGKIYTITKSHKFFNLINRIIKGDLSKIKQKKLEEIESLSKSISM*	common_virus_hmm	common_virus	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0053	cloud	indirect	.	.	.	GCA_022240605.1_01316
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	311917	312711	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	42597	43391	GCA_000466585_1_43_367	GCA_000466585_1_43_367	+	327059	.	cd01309	Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	MYGSANVIGGQFATIKTKGIRIDEMIVQKCASMKVAFGENPKRCYDAKKQSPSTRMATAAILREYLFKTKNYMDNKEKNSTFDMKLESLIPVIKGELNVKAHAHRTDDIFTAIRIAKEFGLKMTLEHCTEGHLIADELAKEGLPAIVGPSFGSKSKVELREKTFETAALLHKAGVKIAIMTDHPVIPVHHLPMCAALAVRAGLDEETALKAITINPAEILGISDRVGSLEVNKDADIVIFDKHPFDIQAKTRYVLIEGKVVFER*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0054	persistent	indirect	.	.	.	GCA_000161995.1_00497
GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote	cenote	CDS	312902	313525	GCA_000466585.1	KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585.1_KE993501.1	GCA_000466585.1|KE993501.1	GCA_000466585_1_43	GCA_000466585_1_43@C17	43582	44205	GCA_000466585_1_43_368	GCA_000466585_1_43_368	+	327059	.	COG1392	Uncharacterized conserved protein YkaA, distantly related to PhoU, UPF0111/DUF47 family [Function unknown]. 	MQKSTRKKDKLFLMLLDISDNLKQGGQYFFDFKIKEQKHLEEFQKKMKEFEHKGDVLVAELIKDLNNTFITPIEREDALDLAVHMDEILDGLEQCAAHFYIYNIYEIDHFMVEFSDLVNKCIVEIHNAVDLLSQKKLTQIREHSVKIKEYEEKCDILERMALKELFENQNDIKRLIQYKEIYELLENTADECKRVSKVLETVTMKNA*	mmseqs_cdd	nonviral_gene	C17	44205	269321	313526	GCA_000466585.1|KE993501.1@region_269322_313526@tool_cenote_CDS_0055	persistent	indirect	.	.	.	GCA_005221325.1_03135
GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote	cenote	tRNA	34242	34317	GCA_000466585.1	KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585.1_KE993496.1	GCA_000466585.1|KE993496.1	GCA_000466585_1_38	GCA_000466585_1_38@C2	5172	5247	tRNA-Thr	tRNA-Thr	+	346819	.	tRNAscan-SE score: 76.2	Thr		tRNAscan-SE	.	C2	26850	29071	55921	GCA_000466585.1|KE993496.1@region_29072_55921@tool_cenote_tRNA_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits