core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	114733	115221	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	1	489	GCA_000469545_1_20_102	GCA_000469545_1_20_102	+	132184	.	PFAM:PF00239.20	integrase	MTEEEIKQIFVKALNSLVEVKENVIAELRSLIDSVCQTRELMEERDKVEQELRVLTERLETLIRENARVAQDQTAYLKQENEIRALYVEKQGHLATLDEQIAERERKRNTLEAMIQVVCGINGEQVEFDEELWGGLLDHIVVKEDGTVVVVFKGGIEIGVGG*	phrogs_hmm	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_000367205.1_01925
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	115731	115919	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	999	1187	GCA_000469545_1_20_103	GCA_000469545_1_20_103	+	132184	.	PFAM:PF03354.15	Large-Terminase	MRWMADNIFIRTDPAGNIKADKEKSTEKIDGVIALIMALDRAIRCGNDTSACVYDERGILLL*	hallmark_hmm	common_virus	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_001813895.1_00907
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	115928	116308	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	1196	1576	GCA_000469545_1_20_104	GCA_000469545_1_20_104	-	132184	.	.	hypothetical protein	MDFSIHMGIPEMLELWMRLHKESMDGSISKADANLYKKWGKALKLLASNPFYPSLHTHEIQDLTRRYGQKVWQSYLENRTSRAMRMYWVYGPEQKDITIIGLEPHPEDKKNGAYDKVTLSKLEPLE*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_014202695.1_01175
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	116311	116556	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	1579	1824	GCA_000469545_1_20_105	GCA_000469545_1_20_105	-	132184	.	.	hypothetical protein	MQAAIKGRYQAHLDAKKRLTLRGAKYDYYEVQEYDNGIILLEPRELVRPEEISKRTLQMMDESIRNLNAGKVSAPIDLSGF*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0004	cloud	indirect	.	.	.	GCA_001189555.1_00712
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	116696	116998	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	1964	2266	GCA_000469545_1_20_106	GCA_000469545_1_20_106	+	132184	.	PFAM:PF06074.12	Portal	MNFFTKLFRSRDKPKNHLGGLSFLFGQTAAGKAVNGRTAMQTTAVYACVRILAESIAGLPLHVYKYKGQGKERVYLPHFRWIFYIFSLYYSPPNNMIRNI*	hallmark_hmm	common_virus	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_947254525.1_00096
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	117098	117502	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	2366	2770	GCA_000469545_1_20_107	GCA_000469545_1_20_107	+	132184	.	COG1733	DNA-binding transcriptional regulator, HxlR family [Transcription]. 	MTKPPHRQMNKFGSCPFATAQKLIAGKWAILVMRTLAAGARRFGEIQKEVGATQATLATQLKTLEYEGLLTRTAFPEVPPRVEYELTPIGYAFTPVLDCIEVWGNRYIDYLHQHTTQAESLPQEEPTLSSHNER*	mmseqs_cdd	nonviral_gene	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0006	persistent	indirect	.	.	.	GCA_001544095.1_01016
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	117509	118210	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	2777	3478	GCA_000469545_1_20_108	GCA_000469545_1_20_108	+	132184	.	cd03024	DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	MKITYWSDYACPFCYIGETRMKKAIAAMDTTEPIELEMKAFQLDPNAPRKSVGNMTDLFVRKYGFSPDEAEKRIDSITAMGRQEGLNFNFVDAQFVNTVDAHRLTKYAQSKEPEQADRLIEVLMDAYFGKNAALSEPDVLRCAAQSAGLNTEEAEKVIKFDTLYLDEVQQDETEAYMRGVSSVPLFIIGDERIAGADSITRMKAALQKALEKIIFVGCKIKLHRKNSIAEALW*	mmseqs_cdd	nonviral_gene	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0007	cloud	indirect	.	.	.	GCA_001483775.1_01086
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	118757	120187	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	4025	5455	GCA_000469545_1_20_109	GCA_000469545_1_20_109	+	132184	.	PDB:4BQQ_A	Integrase	MQMAHYKNYIESRADWDFVGMYSDEGISGTNTKKRDGFNQMIEDALAGKIDLIITKSVSRFARNTVDSLQNVRKLKENGVEIYFEKENIWTFDSRGELLITIMSSLAQEESRSISENTTWGKRKQFAEGKTSVGYSAFLGYDKDFKINEEQAQVVKLIYKLFLGGRSFYAITKELEKRGLKSPSGKDKWYISTVRSILTNEKYRGDALIQKEYTADFLDKTRRKNTGEIPQYYVEEHHEAIIPPDLFDFVQSEIKRREQNGKHSGVSIFANKIKCGCCGGWYGAKVWHSTDKYRRVIYRCNKKYAHKGKPCSTRHLTEEEIKQIFVKALNSLVEVKENVIAELRSLIDDVCQTVELTEERNRIEQELCVLAERIEILIQENARVAQDQNAYLKQENEIRGLYVEKQGNLEKLDDQIAERESKRKTLETMIQVVCGINEEQVEFDEALWGGLLNYIVVKEDGAAVVVFKGGIEIVGG*	common_virus_hmm	common_virus	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0008	shell	indirect	.	.	.	GCA_000186945.2_01838
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	120194	120394	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	5462	5662	GCA_000469545_1_20_110	GCA_000469545_1_20_110	-	132184	.	.	hypothetical protein	MRSVRKGMHLKSKLLHNPLHRLAVDFVSEIAHLYPKTMTYSSLRPTKTKGFRTLDVTYGFSLGMKF*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	120724	121089	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	5992	6357	GCA_000469545_1_20_111	GCA_000469545_1_20_111	+	132184	.	PDB:4U7B_B	Mos-transposase	MKLYTKRLKEERIFQSMSRKGNCLDNSVMENFFGLLKQEIYYGRIYHSYEELKMAIEKHIVYYNEHRIKESIGWLSPAQYRRRPSCIIKAQKSLFYAFRSNFLGALHWQLEFLFCKESLGT*	common_virus_hmm	common_virus	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0010	cloud	indirect	.	.	.	GCA_937906735.1_00143
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	121456	124026	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	6724	9294	GCA_000469545_1_20_112	GCA_000469545_1_20_112	+	132184	.	cd01411	SIR2H	MTLDEVIDLALDGNSVLFLGSGFSVGAVNKCGEKFLTGESLKRYFAKKCEELSEEEYAKYNLADITEYYIDQPSLSFSEKESRKQNLIHELQDLFCVSGVEDYHNVILSVPWKRIYTTNYDDVVEFSSKGSENERVPIVLSASIQEYIKKNICVHLNGYIKELSVQTMKDEFKLLDSSYTKSTLQGNPWFDYMKEDFFAADRVVVIGYSFSTSDLEINRIFLLPNIKQKIVIISYPEIQKEKMTANRLKKYGTLYTPGMQGFAERIEGCRKKFRPSPLEEKPFLSFCEYEPTSLALEKPTFEEYNQFYVYGKYKQNIFFHNDGHSSNPYESIVYRKQVTDFVQRYQEQSRKVFLITSDLGNGKTIFCEMLKREVHKFCRVFVFLRDTEGLAEEVERISQIKENVLVIIEDCYSSLHILSYFSYHPMQHITFLMTTRMSLSSHVRIRIKEELELRQKELLEIPLQKLEDEECRGLAEIFCREQLRKGYSEEALYHRFTNECKSSMANIILDLLEAQQIKDRLEKLMASTMRPEMKDVREVVILGMCISTWKLSLTRDDLFFLLKVDNSAETEIEERVVLKELIGGDNTTEELFVKSSIIAEYMVKHVVDVGDLCYILKKTIEALDRSYRSNSRYEETLKAIISHANYACFTSKQEDTQKISTIKDLYESVRKFKFYRDNPFYWEQYASACIDAGDFDTAKICIRNAYDCAKEKEHFVPFQIETVEARCYLEQAKDNICGLSAKEILSDYITEAQKLLLRHYHHEGNNKRYSISIAEKIFDLYEEKKSELTVEDFSQYIKIMKTFSAKWGISKDVEEIEERELESFLKSAQMSMDDANKQILLTKKRNARKPKKSFSE*	hhsuite_tools	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_009728485.1_00116
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	124089	126371	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	9357	11639	GCA_000469545_1_20_113	GCA_000469545_1_20_113	+	132184	.	PDB:1RIF_B	DNA-helicase	MAQEYIDFPAAGEVHPIPGRNTRHLYHHQLDAIRALDRMDEEHASYSTLVVLPTGGGKTYTASTWLLRHALDKRKKILWLAHRQTLLDQAAESFQNFAYAAEIPHISSFRYRIVSGSSNHDKTVNIDPKDNLLIISKDSIGRESNLARLAPWLAGESEIFLVVDEAHHSTAKTYRRVIDFVKEKVEHVKLIGLTATPFRTAENEQGLLAHIYKDGMSGGKSKKNDIGIAYKVDLKELINRQILSHPHFETYYTDEEYGKDLGIEAWESIQHLDTLSPELSQSIAESGPRNKLIVDTYLKKADEYGQTIVFAVSIDHAIALAKLFNNAGIKTEYIVSSIKDMGTGVTISAKENDRKLEAFRSGDVEVLVNVNILTEGVDLPMTKTVFLARPTVSTILMTQMIGRALRGEKAGGTNIAYIVSFVDNWNEHIAWVSPDTIFVGDSEWPPKDSPEYKKQQIRWVAISKIEEFAAILNDAIDTTQLEAVSFWERIPEGMYAFQYINEEGIDFSYQVMIYNSTQDAYEKMMQALPDLFKGINTDDEYLSDDALNNLEAECKKRFFHRDMVPPYDPRDVRHILKYYAQKESEPKFYTFDQVDRNKLDVPAIARHVWDEDLGPKKRKEYLDALWEGVDDNLLQLFFGKKIYFLRMVDIELAKISDPELYESETNVTYDQRTLENLPLDKIKEVDPDLEQDLRKGAFAKAKVPSGYVCAHCGNVFSNRRYLNVDHIIPMNKGGLSVLENLQILCRTCNAKKGDRSEGEY*	rep_hall_hmm	common_virus	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_959021855.1_01312
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	126434	126898	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	11702	12166	GCA_000469545_1_20_114	GCA_000469545_1_20_114	+	132184	.	.	hypothetical protein	MQEAVLLAQRMHTEDKPFLSMEYRQNYRKWLLDILYWSDYMQDKIALDAEFPSVQAVSDGTLDVSALMRDDFDMDLFFKKLRVQILYLGKKDYARMKLRTLMAKYGYQRRSKDFVRFLKIRLVFYHIQTTLRGNEICDVETMDCLDDMITFRVM*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0013	cloud	indirect	.	.	.	GCA_003992255.1_00128
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	127167	128237	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	12435	13505	GCA_000469545_1_20_115	GCA_000469545_1_20_115	+	132184	.	.	hypothetical protein	MKKFLVTIPLDYTKFSMLDIHSFNANVKIKMDESITVHLDEICTYANQDVKEEYNVAVIISCDSEQFKITVEYIYADTEKYAFEIADCIAYEICKDLSYLAQLHNINTHYFHVKFYYYTRNIKILEEKISNVNEGDSSNKVKQIIISDNISIKEHISMTEIHSLSKDDFQEIFQKSKPNSGINLMLNFFYKALGDIDPSSQYYNLFTIIEYIENNDKKFAQAIQLVKKDECDVLIDSLKANINNLWLDDSSDKRNEYKKRLISIISQDLQRMTNLTRAEKIAAIINNGYKIYDIKEPPFQFEITPVKMKEFIDLRNKLFHGAKTDQCDGEKIQRLSNELMVLCQKIMAKIIFGDGV*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_000175895.1_00011
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	128400	129674	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	13668	14942	GCA_000469545_1_20_116	GCA_000469545_1_20_116	+	132184	.	COG0606	Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]. 	MFAKTYGATTLGIDGRIIDVEVDVSPGLPGFELVGLPDTSVKESKERVRTAIRNSGIQLRQERVTVNLAPADVRKDSSGLDLPIAVGLLASYGMVPEAAVQSALFSAELSLDGNCRPISGILPMAITAREHGLTEFYVAPSNADEALLIDGLKVYAVENLAQLVRHLTGTEKLTPAVPHSTEQKKDAAFTDDFADVQGQYQAKRALEIAAAGGHNVLMVGVPGSGKTMLARRMPSILPELTKEEAIEITKIYSISGLLGKDTGLVTTRPFRSPHHTSSTVAMIGGGSIPRPGEVTLAHHGVLFLDELPEFSKKTLEVLREPIEDRQITVSRANATLTFPSSIILVAAMNLCRCGRYGNIRGVDQWLWQYRHHQSRRRPPYALWTQSDALCRGGAARRTGRGHRRCGQHRELNGTALPFRGAPER*	mmseqs_cdd	nonviral_gene	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0015	persistent	indirect	.	.	.	GCA_003252645.1_01424
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	129631	129870	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	14899	15138	GCA_000469545_1_20_117	GCA_000469545_1_20_117	-	132184	.	.	hypothetical protein	MQELQPSRNHLNDAVDEITDGLCEVVRHDPVLRMTVEIETEPAALFLLERKQPGDIEPRIDRLSIFTVRAHLEMAVRSR*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0016	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	129978	131129	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	15246	16397	GCA_000469545_1_20_118	GCA_000469545_1_20_118	+	132184	.	PF01832.20	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	MARAARPILRVLSSAPLQLGEFVGNLALHGFPALGALAGGDLSAAEAAVSDPTKIVQKGMNIIAPVFNGVIHSNGSSSVILLLLGSTGSVLLMLIFAAILFVLFCFIGYTIAIAYIEFYATILFSFTVFPLAGLKHVRHFASNGINSVFAAALNLMFFCLFAAMLQSTMQHIVVENLMSQAVAAEAASGDPEQSIAGRPKAELAYRISQIMQERYGRTLHPSWIWAQLAHETGNFTSRLAVEDHNYGGIKAYGDAKTAGISPEGDYYRHFDSDEEFAQYAASNYNAYAEDGIYDARTIGEFAAALKHGGYFGATLESYTSALISFVGGSAGVAQQAVANNLLLLQLILVVLMYMYFADRIHKFVNTQFGGAGFKLSERQGVFN*	hhsuite_tools	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_905372505.1_01760
GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote	cenote	CDS	131198	132088	GCA_000469545.1	KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545.1_KI273072.1	GCA_000469545.1|KI273072.1	GCA_000469545_1_20	GCA_000469545_1_20@C3	16466	17356	GCA_000469545_1_20_119	GCA_000469545_1_20_119	+	132184	.	.	hypothetical protein	MFLQRWKKHRVKVMFVALFTASASVGALVAHMHDGEAWGVLRPLDPSNYYSPTSISWADTANPGHYFYHDLGSNGGNVYDITREIKSILFGEKFTHILETITAQLGIDIKNKTPLDAGILHATGQVAQEKEAHTADLYETMQRELLTESTSFHDYEESPANCEAQRIRSHQRQGIAAAAGKYAQLASSALADNNATREAVHALVAAAANAQGETELRQITEQLNALGTLDQAQINALLAAKVQLENDMRRVKLDQEIEWAKQAEDAKIIVTDPYNEERNAVSGYTREKPRGFVAFK*	.	hypothetical_protein	C3	17452	114733	132185	GCA_000469545.1|KI273072.1@region_114734_132185@tool_cenote_CDS_0018	cloud	indirect	.	.	.	GCA_905372505.1_01759