core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	2	2308	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	3	2309	GCA_000506685_1_27_1	GCA_000506685_1_27_1	-	31131	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSMKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRNAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSPFSFGFVFDNLDPYLSKSDIGTTWTLSFDYKLDEVDGSFPFHMMHNGGNGFGIEGQKKSTATREWQRFRLTGPVFFKEDAPSESKLQMILFNSDLGY	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.001	GCA_000506685.1_01707
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	2305	3003	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	2306	3004	GCA_000506685_1_27_2	GCA_000506685_1_27_2	-	31131	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGSNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_000506685.1_01707
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	3003	7118	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	3004	7119	GCA_000506685_1_27_3	GCA_000506685_1_27_3	-	31131	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQTIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKIDALSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNVRVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0003	shell	direct	high	4115	1.0	GCA_000506685.1_01708
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	7175	7405	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	7176	7406	GCA_000506685_1_27_4	GCA_000506685_1_27_4	-	31131	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_000506685.1_01709
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	7654	7947	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	7655	7948	GCA_000506685_1_27_5	GCA_000506685_1_27_5	-	31131	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_000506685.1_01711
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	7993	8589	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	7994	8590	GCA_000506685_1_27_6	GCA_000506685_1_27_6	-	31131	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNDLGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_000506685.1_01712
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	8606	8986	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	8607	8987	GCA_000506685_1_27_7	GCA_000506685_1_27_7	-	31131	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_000506685.1_01713
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	8986	9384	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	8987	9385	GCA_000506685_1_27_8	GCA_000506685_1_27_8	-	31131	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_000506685.1_01714
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	9377	9766	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	9378	9767	GCA_000506685_1_27_9	GCA_000506685_1_27_9	-	31131	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_000506685.1_01715
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	9753	9941	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	9754	9942	GCA_000506685_1_27_10	GCA_000506685_1_27_10	-	31131	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_000506685.1_01716
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	9934	10224	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	9935	10225	GCA_000506685_1_27_11	GCA_000506685_1_27_11	-	31131	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_000506685.1_01717
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	10238	11353	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	10239	11354	GCA_000506685_1_27_12	GCA_000506685_1_27_12	-	31131	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAHLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_000506685.1_01718
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	11372	12094	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	11373	12095	GCA_000506685_1_27_13	GCA_000506685_1_27_13	-	31131	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWIDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_000506685.1_01719
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	12075	13223	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	12076	13224	GCA_000506685_1_27_14	GCA_000506685_1_27_14	-	31131	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVVFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_000506685.1_01720
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	13279	14919	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	13280	14920	GCA_000506685_1_27_15	GCA_000506685_1_27_15	-	31131	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDNAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIAPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_000506685.1_01721
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	14916	15254	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	14917	15255	GCA_000506685_1_27_16	GCA_000506685_1_27_16	-	31131	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_000506685.1_01722
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	15373	15669	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	15374	15670	GCA_000506685_1_27_17	GCA_000506685_1_27_17	-	31131	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	15883	16425	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	15884	16426	GCA_000506685_1_27_18	GCA_000506685_1_27_18	-	31131	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_000506685.1_01723
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	16724	17152	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	16725	17153	GCA_000506685_1_27_19	GCA_000506685_1_27_19	-	31131	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVVRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_000506685.1_01724
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	17223	17453	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	17224	17454	GCA_000506685_1_27_20	GCA_000506685_1_27_20	-	31131	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_000506685.1_01725
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	17443	17622	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	17444	17623	GCA_000506685_1_27_21	GCA_000506685_1_27_21	-	31131	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_000506685.1_01726
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	17615	17728	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	17616	17729	GCA_000506685_1_27_22	GCA_000506685_1_27_22	-	31131	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0022	shell	direct	high	113	0.991	GCA_000506685.1_01727
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	17730	18254	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	17731	18255	GCA_000506685_1_27_23	GCA_000506685_1_27_23	-	31131	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYLEWYVLSREEHDLTQACKFLDRSYNAVRSKLAKLQKYNPNLQFKPKWSDADDSYILKYYQRFSYKTLARILGRSEKAIRDRIRKLGKRKILDLTIFHKDVVSLANQGIAVKDIAQKLGLHYNQVYYCLNKHQIPYKKREFRNQSNNLAWRNLNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0023	shell	direct	high	524	0.998	GCA_000506685.1_01728
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	18241	18420	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	18242	18421	GCA_000506685_1_27_24	GCA_000506685_1_27_24	-	31131	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0024	shell	direct	high	179	0.994	GCA_000506685.1_01729
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	18413	18820	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	18414	18821	GCA_000506685_1_27_25	GCA_000506685_1_27_25	-	31131	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDLSDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDVLEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0025	shell	direct	high	407	0.998	GCA_000506685.1_01730
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	18817	19077	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	18818	19078	GCA_000506685_1_27_26	GCA_000506685_1_27_26	-	31131	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0026	persistent	direct	high	260	0.996	GCA_000506685.1_01731
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	19074	19550	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	19075	19551	GCA_000506685_1_27_27	GCA_000506685_1_27_27	-	31131	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MGDIRILDACCGSRMFWFDKNESHTTFMDIRQEKFEIHGKKVNVNPDVVGDFRDMPFDDETFNLVVFDPPHLKWAGQNSIMRSQYGELDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFEEVTD*	mmseqs_cdd	nonviral_gene	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0027	shell	direct	high	476	0.998	GCA_000506685.1_01732
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	19585	19836	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	19586	19837	GCA_000506685_1_27_28	GCA_000506685_1_27_28	-	31131	.	.	hypothetical protein	MIQTLEEGMKNQSKRIKIPMEIRPFDVGYRIVNKHGQALALKNGASIFALPSLAEKAIKKKFSKDDPDFDIENISLKRSLLSI*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0028	shell	direct	high	251	0.996	GCA_000506685.1_01733
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	19836	20321	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	19837	20322	GCA_000506685_1_27_29	GCA_000506685_1_27_29	-	31131	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNIKALIKKYEAVECVVGIVSGKTILKTVLRDLKQLDEQKSVKVPQFVAEWIEEARKACKDVAELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYIVSLNNGQPLTKTQSGKVLYFNQNIITGNYKFTRKELEEAGFGWVFDCPGIEIEEVE*	mmseqs_cdd	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0029	shell	direct	high	485	0.998	GCA_000506685.1_01734
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	20323	20640	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	20324	20641	GCA_000506685_1_27_30	GCA_000506685_1_27_30	-	31131	.	.	hypothetical protein	MMEDLKQKVNEVYNWTVEDGKPQPPKQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWIGYSPGMSQVVIAVYLIYGGN*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0030	shell	direct	high	317	0.997	GCA_000506685.1_01735
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	20612	20944	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	20613	20945	GCA_000506685_1_27_31	GCA_000506685_1_27_31	-	31131	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEELEDDGRFKAKS*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0031	shell	direct	high	332	0.997	GCA_000506685.1_01736
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	20934	21125	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	20935	21126	GCA_000506685_1_27_32	GCA_000506685_1_27_32	-	31131	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0032	shell	direct	high	191	0.995	GCA_000506685.1_01737
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	21112	21279	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	21113	21280	GCA_000506685_1_27_33	GCA_000506685_1_27_33	-	31131	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0033	persistent	direct	high	167	0.994	GCA_000506685.1_01738
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	21295	21690	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	21296	21691	GCA_000506685_1_27_34	GCA_000506685_1_27_34	-	31131	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0034	persistent	direct	high	395	0.997	GCA_000506685.1_01739
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	21683	21784	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	21684	21785	GCA_000506685_1_27_35	GCA_000506685_1_27_35	-	31131	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0035	shell	direct	high	101	0.99	GCA_000506685.1_01740
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	21777	22004	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	21778	22005	GCA_000506685_1_27_36	GCA_000506685_1_27_36	-	31131	.	.	hypothetical protein	MLNLYFVYNGHCKFYLGMFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGTKDCYYLVTFSGGEEND*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0036	shell	direct	high	227	0.996	GCA_000506685.1_01741
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	22014	22475	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	22015	22476	GCA_000506685_1_27_37	GCA_000506685_1_27_37	-	31131	.	TIGR02072	malonyl-acyl carrier protein O-methyltransferase BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]	MKDIRILDACCGSRMFWFDKNEPHTTYMDRREEEFEIHKKKINVKPDIVADFRDMPFDDETFNLVVFDPPHLLWAGQKSFMRAQYGQLDLLTWRLDLQQGFEECFRVLKTGGTLIFKWSDAQVNVKEILELVPQQPLFGQQRGTTHWMAFMKF*	mmseqs_cdd	nonviral_gene	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0037	shell	direct	high	461	0.998	GCA_000506685.1_01742
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	22475	22669	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	22476	22670	GCA_000506685_1_27_38	GCA_000506685_1_27_38	-	31131	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISYSEEKKAMRFVSRGVAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0038	persistent	direct	high	194	0.995	GCA_000506685.1_01743
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	22684	23454	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	22685	23455	GCA_000506685_1_27_39	GCA_000506685_1_27_39	-	31131	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHKENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLISADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0039	persistent	direct	high	770	0.999	GCA_000506685.1_01744
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	23448	23606	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	23449	23607	GCA_000506685_1_27_40	GCA_000506685_1_27_40	-	31131	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0040	persistent	direct	high	158	0.994	GCA_000506685.1_01745
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	23594	24415	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	23595	24416	GCA_000506685_1_27_41	GCA_000506685_1_27_41	-	31131	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0041	persistent	direct	high	821	0.999	GCA_000506685.1_01746
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	24399	24695	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	24400	24696	GCA_000506685_1_27_42	GCA_000506685_1_27_42	-	31131	.	.	hypothetical protein	MEELIEWLLWHERVNKEMLSSDEEKSDFEIYLEDENRKISLIKEYLTDYEKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0042	cloud	direct	high	296	0.997	GCA_000506685.1_01747
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	24711	25031	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	24712	25032	GCA_000506685_1_27_43	GCA_000506685_1_27_43	-	31131	.	.	hypothetical protein	MFEPPILDQLMGVGALLLGFAGLCRHIKLQEERKEKERREEQEFASMITQGYNQAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0043	shell	direct	high	320	0.997	GCA_000506685.1_01748
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	25044	25334	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	25045	25335	GCA_000506685_1_27_44	GCA_000506685_1_27_44	-	31131	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMKKFGFTHAYIKKLERKGLRFRKQGKDIMYDVNDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0044	persistent	direct	high	290	0.997	GCA_000506685.1_01749
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	25439	25582	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	25440	25583	GCA_000506685_1_27_45	GCA_000506685_1_27_45	-	31131	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0045	persistent	direct	high	143	0.993	GCA_000506685.1_01750
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	25699	25923	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	25700	25924	GCA_000506685_1_27_46	GCA_000506685_1_27_46	+	31131	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSNFSESTTDKPSAVIQLSDFEMSKTEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0046	shell	direct	high	224	0.996	GCA_000506685.1_01751
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	25886	26041	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	25887	26042	GCA_000506685_1_27_47	GCA_000506685_1_27_47	-	31131	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0047	shell	ambiguous	low	39	0.25	GCA_000506685.1_01751
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	26305	26523	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	26306	26524	GCA_000506685_1_27_48	GCA_000506685_1_27_48	+	31131	.	.	hypothetical protein	MSRLQPRPQKNYPNYNWDDLDRFIQDILSDPSFKVCCVDPALYAIPKDEIIAECISAGYTVEEREDGILNIS*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0048	shell	direct	high	218	0.995	GCA_000506685.1_01752
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	26478	26636	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	26479	26637	GCA_000506685_1_27_49	GCA_000506685_1_27_49	-	31131	.	.	hypothetical protein	MRPRRYPYSGKRKKPIGQSIDLVARLFRLESQVISLANHEMFKMPSSRSSTV*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0049	shell	ambiguous	low	47	0.296	GCA_000506685.1_01752
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	26650	27360	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	26651	27361	GCA_000506685_1_27_50	GCA_000506685_1_27_50	-	31131	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0050	shell	direct	high	710	0.999	GCA_000506685.1_01753
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	27455	27607	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	27456	27608	GCA_000506685_1_27_51	GCA_000506685_1_27_51	-	31131	.	.	hypothetical protein	MANKGFKNSYIDRKKLSSSLKTLMTQQAIERAELAESQRKELEEFLKDLL*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0051	shell	direct	high	152	0.993	GCA_000506685.1_01754
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	27696	27893	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	27697	27894	GCA_000506685_1_27_52	GCA_000506685_1_27_52	-	31131	.	.	hypothetical protein	MNNAAQKVTRIDKDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0052	persistent	direct	high	197	0.995	GCA_000506685.1_01755
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	27905	28090	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	27906	28091	GCA_000506685_1_27_53	GCA_000506685_1_27_53	-	31131	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRMAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0053	persistent	direct	moderate	171	0.919	GCA_000506685.1_01756
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	28208	28417	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	28209	28418	GCA_000506685_1_27_54	GCA_000506685_1_27_54	-	31131	.	PFAM:PF13744.5	transcriptional-repressor	MQILLYKLRKEKNISQKEMADVIGKSENSYRNKELGKQDFKLSEMFKIAHYFGKELGDIFTPQTSRKVK*	phrogs_hmm	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0054	shell	direct	high	209	0.995	GCA_000506685.1_01757
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	28599	28724	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	28600	28725	GCA_000506685_1_27_55	GCA_000506685_1_27_55	-	31131	.	.	hypothetical protein	MRRRKKPEKATKKEPWLDGPKALVISTVITASVELIKHFLK*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0055	shell	direct	high	125	0.992	GCA_000506685.1_01758
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	28890	29678	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	28891	29679	GCA_000506685_1_27_56	GCA_000506685_1_27_56	+	31131	.	PDB:2FJR_A	Repressor-protein-CI	MTDKELAIYIGTKIKEYRLQRGLTQKELATLVDMGDTTIANYEKGFRTPKKNTLFKISSALSVTIDDLFPPIRKADTPTASLDLLTQQITDKVVQLTPDNKKIVLRTSEELLKEQKNEEETKINEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDIILDFPPAEDTHIKIYAVIGVYRGE*	common_virus_hmm	common_virus	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0056	shell	direct	high	788	0.999	GCA_000506685.1_01759
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	29686	30150	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	29687	30151	GCA_000506685_1_27_57	GCA_000506685_1_27_57	+	31131	.	.	hypothetical protein	MNYNDLNDQQVQELINKLKYPKNELSFNEIHTTISSLFGKIDIDEAIIDDDDIQYILHIYRGRMNPERYSIHIRFKNSHNHLVRVDINPSNRHVNPDDSIVEGNHIHIYSNHYDKKDRVAIPLEDSDFPNLTHIVDVFSEFIKYTHIKTEADDE*	.	hypothetical_protein	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0057	shell	direct	high	464	0.998	GCA_000506685.1_01760
GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote	cenote	CDS	30143	30931	GCA_000506685.1	AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685.1_AYRO01000027.1	GCA_000506685.1|AYRO01000027.1	GCA_000506685_1_27	GCA_000506685_1_27@C0	30144	30932	GCA_000506685_1_27_58	GCA_000506685_1_27_58	+	31131	.	PF08861.10	Domain of unknown function DUF1828	MNNSNTLKNIYFDWLLKEYKFNDLEKNIVEIRTPFLDNDFDHIILYAEFLSDGRVTLTDDGWTINNLKSHGVSFSNRSTYKNNLLNTIVNNLGTRAENGELFITTSLEKFPLAKQRLLQTIMQVNDMIVLRDTTIKNVFHDEIENTLVQREVLFTRRPSYSGKEGITVQFDFAIPTIKKERLVRTISNGNDLNRAKLLAMDTRILQNHKDNVEYIAVVDDIHHRFDKVAETQAVFNENSKDKIILLSHKDILENSLLLSNVI*	hhsuite_tools	nonviral_gene	C0	31132	0	31132	GCA_000506685.1|AYRO01000027.1@region_1_31132@tool_cenote_CDS_0058	shell	direct	high	788	0.999	GCA_000506685.1_01761
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	2	2308	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	3	2309	GCA_000506685_1_30_1	GCA_000506685_1_30_1	-	25152	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRNAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRITALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVQAGSIRQEILNATKDKADKTLIRAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGQKEFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGY	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	2313	2663	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	2314	2664	GCA_000506685_1_30_2	GCA_000506685_1_30_2	-	25152	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYTFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_000506685.1_01822
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	2672	5764	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	2673	5765	GCA_000506685_1_30_3	GCA_000506685_1_30_3	-	25152	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKRFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGGGKGGKGKGGGGGPFKDILPEVELTDMGNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFTVFSDWCKENKEPILALITAWQTINFLSWAEQAGGLAGAFELLSSKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHTAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAIVNIFSGIGEWFSGVFQGAWDAIVNIFTPIGSWFGQRWADVTSALANIGAWFTDMFQKAWTGLTNIFSKLGSWFGERWNDVTSALSKVASWFGDIFGKAFDAVKNAFSSIGDFFKGVWDTVKSIFVNAGQMVGEAVGGAFKSAVNAVLGTIENVVNGFIGMINGVLDVVRNLPGLGWIGSVSTVSLPRLARGGIVDSPTIAMIGEAGKEAVVPLENTGFIQTLGRVVSSAVVNAMAGVGPQGGFSGDGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0003	shell	direct	high	3087	0.998	GCA_000506685.1_01823
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	6066	6629	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	6067	6630	GCA_000506685_1_30_4	GCA_000506685_1_30_4	-	25152	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKVREQSNSIGSTFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSASMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_000506685.1_01824
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	6616	6966	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	6617	6967	GCA_000506685_1_30_5	GCA_000506685_1_30_5	-	25152	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMLESYNRVKIQERKEKIIDSYRLSQMISNHVSLLLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMRDFAERHNRKRKEEMNGNS*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_000506685.1_01825
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	7005	7385	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	7006	7386	GCA_000506685_1_30_6	GCA_000506685_1_30_6	-	25152	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKDKKISKKKMTVVE*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_000506685.1_01826
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	7390	7803	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	7391	7804	GCA_000506685_1_30_7	GCA_000506685_1_30_7	-	25152	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_000506685.1_01827
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	7806	8174	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	7807	8175	GCA_000506685_1_30_8	GCA_000506685_1_30_8	-	25152	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_000506685.1_01828
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	8171	8686	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	8172	8687	GCA_000506685_1_30_9	GCA_000506685_1_30_9	-	25152	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKAGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYYFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_000506685.1_01829
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	8661	8999	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	8662	9000	GCA_000506685_1_30_10	GCA_000506685_1_30_10	-	25152	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVAKEGYAKEAETVRLELWPAGSKLQSELYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_000506685.1_01830
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	8980	9291	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	8981	9292	GCA_000506685_1_30_11	GCA_000506685_1_30_11	-	25152	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_000506685.1_01831
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	9293	9481	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	9294	9482	GCA_000506685_1_30_12	GCA_000506685_1_30_12	-	25152	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_000506685.1_01832
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	9471	9653	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	9472	9654	GCA_000506685_1_30_13	GCA_000506685_1_30_13	-	25152	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_000506685.1_01833
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	9665	10507	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	9666	10508	GCA_000506685_1_30_14	GCA_000506685_1_30_14	-	25152	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAEAPTTLATIDKALEIFEDEEDARYVAIINPKDAIKLKTDVAKEWTKGSELGADMVVSGTFGEAAGVQIVRSKKVDEGKGFIVKVSPSQTQTDDANKYGAFVILLKRDVAIETDRDILKKTTVITGDEHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_000506685.1_01834
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	10513	11082	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	10514	11083	GCA_000506685_1_30_15	GCA_000506685_1_30_15	-	25152	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_000506685.1_01835
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	11372	12868	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	11373	12869	GCA_000506685_1_30_16	GCA_000506685_1_30_16	-	25152	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFNVGQNDARRLVRTESAFFHNQMELLNYEEADIEKYIFVAVLDKRTSRICQEHDNQVYDRDKAVPGVNCPPMHPWCRSTTVGYDEDADYSNLKRRARNPETGKVEYVPADMTYKEWYSKYVAKDVKNEIQDYKKSDKTVSRYNTPKLFSDVSNAWDEIGRGGLSKEQLVDLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0016	shell	direct	high	1496	0.999	GCA_000506685.1_01837
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	12831	13268	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	12832	13269	GCA_000506685_1_30_17	GCA_000506685_1_30_17	-	25152	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_000506685.1_01838
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	13498	14031	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	13499	14032	GCA_000506685_1_30_18	GCA_000506685_1_30_18	-	25152	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWSMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0018	shell	direct	high	533	0.998	GCA_000506685.1_01839
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	14160	15179	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	14161	15180	GCA_000506685_1_30_19	GCA_000506685_1_30_19	-	25152	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITMHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQSEEATPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0019	shell	direct	high	1019	0.999	GCA_000506685.1_01840
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	15191	16405	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	15192	16406	GCA_000506685_1_30_20	GCA_000506685_1_30_20	-	25152	.	PDB:5OEA_B	Large-Terminase	MTNKFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVLNNMVFMNEIARVRETADRLNIDEPMYILAGTSSTSIQNNIIQELYNMFDIEPKYDKHGAFTLCGVKVVQVYTGSISGLKRARGFTAFGAYVNEASLANEQVFKEIISRCSGEGARIVWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKNATPAGVFYDRDILGLWVTGEGVVYRDFSENMVVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0020	shell	direct	high	1214	0.999	GCA_000506685.1_01841
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	16395	16889	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	16396	16890	GCA_000506685_1_30_21	GCA_000506685_1_30_21	-	25152	.	PFAM:PF03592.15	Terminase-small-subunit	MDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASIKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMMNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDNEQDDKLIDFAKALRGAFDDK*	hallmark_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0021	shell	direct	high	494	0.998	GCA_000506685.1_01842
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	17472	17918	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	17473	17919	GCA_000506685_1_30_22	GCA_000506685_1_30_22	-	25152	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLENYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0022	shell	direct	high	446	0.998	GCA_000506685.1_01844
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	18048	18263	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	18049	18264	GCA_000506685_1_30_23	GCA_000506685_1_30_23	+	25152	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_000506685.1_01845
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	18247	18600	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	18248	18601	GCA_000506685_1_30_24	GCA_000506685_1_30_24	+	25152	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0024	shell	direct	high	353	0.997	GCA_000506685.1_01846
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	18621	19037	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	18622	19038	GCA_000506685_1_30_25	GCA_000506685_1_30_25	-	25152	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYETPELLEN*	mmseqs_cdd	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0025	shell	direct	high	416	0.998	GCA_000506685.1_01847
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	19034	19525	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	19035	19526	GCA_000506685_1_30_26	GCA_000506685_1_30_26	-	25152	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0026	shell	direct	high	491	0.998	GCA_000506685.1_01848
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	19522	19782	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	19523	19783	GCA_000506685_1_30_27	GCA_000506685_1_30_27	-	25152	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0027	persistent	direct	high	260	0.996	GCA_000506685.1_01849
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	19779	19940	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	19780	19941	GCA_000506685_1_30_28	GCA_000506685_1_30_28	-	25152	.	.	hypothetical protein	MSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVTD*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0028	shell	direct	high	161	0.994	GCA_000506685.1_01850
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	19940	20245	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	19941	20246	GCA_000506685_1_30_29	GCA_000506685_1_30_29	-	25152	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEEVE*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0029	shell	direct	high	305	0.997	GCA_000506685.1_01851
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	20413	20580	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	20414	20581	GCA_000506685_1_30_30	GCA_000506685_1_30_30	-	25152	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0030	persistent	direct	high	167	0.994	GCA_000506685.1_01852
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	20596	21021	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	20597	21022	GCA_000506685_1_30_31	GCA_000506685_1_30_31	-	25152	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MQERLILKFELNRKQMINSNDRPHFHQKAKTTKFLRQLAEYEGKNVLRDYFGLPYSEDKPCKVKVRIYPPTNRKYDPPNWSPTSKALFDGLTDAKIWTDDNYNVIVSTEFMHGGKSGNKNYRIELEIYEYHEILQRIVDGI*	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0031	shell	direct	high	425	0.998	GCA_000506685.1_01853
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	20999	21361	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	21000	21362	GCA_000506685_1_30_32	GCA_000506685_1_30_32	-	25152	.	PDB:2FJR_A	Repressor-protein-CI	MNRLKELKQAKKLSQKEIAKEMSISEKTLSRWENGESQIKPEKAQQLAKYLGVNVGYLLGYESNPLERLKSLVDELKEHKDLLGVLDWYTAFDLANDILAIASVEKARWLGRLNAGEIDS*	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0032	shell	direct	high	362	0.997	GCA_000506685.1_01854
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	21374	21796	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	21375	21797	GCA_000506685_1_30_33	GCA_000506685_1_30_33	-	25152	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRLTKDAELRYTQSNVAVATFTLAVNRTFKSENGEREADFINCVMWRKQAENLANWAKKGALIGITGRIQTRTYDNQQGQRVYVTEVVAENFQLMEFKKDGSQPVVDNHDQQAPNFARNSNPMDISDDDLPF*	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0033	shell	direct	high	422	0.998	GCA_000506685.1_01855
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	21800	22423	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	21801	22424	GCA_000506685_1_30_34	GCA_000506685_1_30_34	-	25152	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MTKLAFSELQKRMQLEKKKKQGVNYAFRNAEDIYTKFKEINTDWELTVSDDLFGVGERIFVKSTAIVSNGDKQFQSVGFAELDKVPVFKTGNQQMQVPQWTGAVSSYARKYALQGLFGIGEKDVDEYPSDMNEAENQQAKKANDPVISVEKANYYLKEIAAISVEKGKEDGSIVKWFLNHLGVVDYKMIKQSQIEDADMLLAKLKGN*	mmseqs_cdd	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0034	shell	direct	high	623	0.998	GCA_000506685.1_01856
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	22434	22907	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	22435	22908	GCA_000506685_1_30_35	GCA_000506685_1_30_35	-	25152	.	PFAM:PF05565.10	resistance-protein	MATLYELTGQFLDVYNLELDEETKLDTLDSIDWEIEYETKVENYIKVMKNLEADVEARKNEIKRLMELNKADEKKKEHLKDTLSASMSLTGHERVDTPLFKVSFRKSQAVEVDEAVLPEYYKVATWKADKKRLKEDLKKGLEIIGASLVEHKNLSIR*	common_virus_hmm	common_virus	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0035	shell	direct	high	473	0.998	GCA_000506685.1_01857
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	23034	23210	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	23035	23211	GCA_000506685_1_30_36	GCA_000506685_1_30_36	-	25152	.	.	hypothetical protein	MIQELHEEIDNWRAEYIHLGRELGEIINEQQNIILKLQNENRHLKRENWNLKKTKGRR*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0036	shell	direct	high	176	0.994	GCA_000506685.1_01858
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	23316	23459	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	23317	23460	GCA_000506685_1_30_37	GCA_000506685_1_30_37	-	25152	.	.	hypothetical protein	MTRIELENRVWLLANHEEKNELLDLGLTSKARYVKRVLELGKVYAHV*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0037	shell	direct	high	143	0.993	GCA_000506685.1_01860
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	23476	23823	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	23477	23824	GCA_000506685_1_30_38	GCA_000506685_1_30_38	-	25152	.	.	hypothetical protein	MFEPPLVSQLLGTGAVILGFIGAGLLAHQMDKQEEEKIRQKEEERREEQEFASMIIQGYNQAYERGREAQRQEIRKNIRREFKGFTYDNEPPQGLRPEPLALPEPRRARHAKYLG*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0038	shell	direct	high	347	0.997	GCA_000506685.1_01861
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	23823	24080	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	23824	24081	GCA_000506685_1_30_39	GCA_000506685_1_30_39	-	25152	.	.	hypothetical protein	MINKDQIIKAQQEKIERIEQLQKKLHKLSTLGLLTTKLLGLPNELEKPLKVTHDISHVIKDVLDGMSPSEAIKQNMAEEDDEEEE*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0039	shell	direct	high	257	0.996	GCA_000506685.1_01862
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	24168	24434	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	24169	24435	GCA_000506685_1_30_40	GCA_000506685_1_30_40	-	25152	.	.	hypothetical protein	METVQIVRIKDVIIEKISANDEELEHIFGCSKRQAGDMRREMKKLPSQQKYLRNDGQLVTIKGFDAYLQYRGSQSWKKEMSKTVKMTR*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0040	shell	direct	high	266	0.996	GCA_000506685.1_01863
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	24553	24792	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	24554	24793	GCA_000506685_1_30_41	GCA_000506685_1_30_41	+	25152	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMASPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0041	shell	direct	high	239	0.996	GCA_000506685.1_01864
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	24785	24955	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	24786	24956	GCA_000506685_1_30_42	GCA_000506685_1_30_42	-	25152	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0042	shell	direct	high	170	0.994	GCA_000506685.1_01865
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	CDS	24952	25095	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	24953	25096	GCA_000506685_1_30_43	GCA_000506685_1_30_43	-	25152	.	.	hypothetical protein	MEDKIIELADYFISENTTYREAKIACEKLLKQVSHEIELRAMESRTV*	.	hypothetical_protein	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_CDS_0043	persistent	direct	high	143	0.993	GCA_000506685.1_01866
GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote	cenote	tRNA	16950	17020	GCA_000506685.1	AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685.1_AYRO01000030.1	GCA_000506685.1|AYRO01000030.1	GCA_000506685_1_30	GCA_000506685_1_30@C0	16951	17021	tRNA-Trp	tRNA-Trp	-	25152	.	tRNAscan-SE score: 59.0	Trp	NA	tRNAscan-SE	.	C0	25153	0	25153	GCA_000506685.1|AYRO01000030.1@region_1_25153@tool_cenote_tRNA_0001	.	.	.	.	.	.