core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	788685	789755	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	1	1071	GCA_000520055_1_1_699	GCA_000520055_1_1_699	-	5402276	.	PDB:1Z19_B	Integrase	MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0001	cloud	direct	high	1070	0.999	GCA_000520055.1_00764
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	789991	790158	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	1307	1474	GCA_000520055_1_1_700	GCA_000520055_1_1_700	-	5402276	.	.	hypothetical protein	MHFRVTGEWNGEPFNRVIEAENINDCYDHWMIWAQIAHADITNIRIEELKEHQAA*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0002	cloud	direct	high	167	0.994	GCA_000520055.1_00765
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	790401	791003	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	1717	2319	GCA_000520055_1_1_701	GCA_000520055_1_1_701	+	5402276	.	.	hypothetical protein	MSYFLRKKWMVNLSGAGKILWALNMKKDSYPYLICMTVSGLIFIFLFFWWRADIYRVTFLNQSISHYYILFSMGIAFLLSLFWVKKGIVKQSGWKSLSAYLKVYAGMCIFAGFFLIIPLTTLTYFLPGETSSYVAPYRYTSGSSKSCSGAEVDDPDLHENIRICYPYGNYEYDNIIYVEKKINTLGAVVTYAQTARDDTE*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0003	cloud	direct	high	602	0.998	GCA_000520055.1_00766
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	791534	791749	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	2850	3065	GCA_000520055_1_1_702	GCA_000520055_1_1_702	-	5402276	.	.	hypothetical protein	MTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0004	cloud	direct	high	215	0.995	GCA_000520055.1_00768
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	791826	792017	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	3142	3333	GCA_000520055_1_1_703	GCA_000520055_1_1_703	-	5402276	.	pfam07131	Protein of unknown function (DUF1382). This family consists of several hypothetical Escherichia coli and bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	MHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLATSLSQKLEMMVAKAEADERDLV*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0005	cloud	direct	high	191	0.995	GCA_000520055.1_00769
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	791990	792172	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	3306	3488	GCA_000520055_1_1_704	GCA_000520055_1_1_704	-	5402276	.	pfam07026	Protein of unknown function (DUF1317). This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.	MKHPHDNIRVGTITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEEINNKREAICTKHLLLS*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0006	shell	direct	high	182	0.995	GCA_000520055.1_00770
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	792169	792849	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	3485	4165	GCA_000520055_1_1_705	GCA_000520055_1_1_705	-	5402276	.	PDB:3SZ4_A	Exonuclease	MTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVVERDEKYMAGFDEMVPEFIEKMDEALAEIGFVFGEQWR*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0007	shell	direct	high	680	0.999	GCA_000520055.1_00771
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	792846	793631	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	4162	4947	GCA_000520055_1_1_706	GCA_000520055_1_1_706	-	5402276	.	PFAM:PF03837.13	RecT-protein	MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKATEQKVAA*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0008	shell	direct	high	785	0.999	GCA_000520055.1_00772
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	793591	793932	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	4907	5248	GCA_000520055_1_1_707	GCA_000520055_1_1_707	-	5402276	.	pfam06064	Host-nuclease inhibitor protein Gam. The Gam protein inhibits RecBCD nuclease and is found in both bacteria and bacteriophage.	MNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPHTCLNRYASVICNATGPAKKPLPVRLMTMLSFRSAWQNTSGTWLKPLLTIRLILIQRYKTDEYSTRNAGREAG*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0009	cloud	direct	high	341	0.997	GCA_000520055.1_00773
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	794007	794150	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	5323	5466	GCA_000520055_1_1_708	GCA_000520055_1_1_708	-	5402276	.	pfam06301	Bacteriophage lambda Kil protein. This family consists of several Bacteriophage lambda Kil protein like sequences from both phages and bacteria. Induction of a lambda prophage causes the death of the host cell even in the absence of phage replication and lytic functions due to expression of the lambda kil gene.	MDQTIMAIQTKFTIATFIGDEKMFREAVDAYKKWILILKLRSSKSIH*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0010	cloud	direct	high	143	0.993	GCA_000520055.1_00774
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	794119	794283	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	5435	5599	GCA_000520055_1_1_709	GCA_000520055_1_1_709	-	5402276	.	pfam02061	Lambda Phage CIII. The CIII protein from bacteriophage lambda is an inhibitor of the FtsH peptidase.	MQYAIAGWPVAGCPSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNNYGYPD*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0011	cloud	direct	high	164	0.994	GCA_000520055.1_00775
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	794356	794724	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	5672	6040	GCA_000520055_1_1_710	GCA_000520055_1_1_710	-	5402276	.	pfam10800	Protein of unknown function (DUF2528). This family of proteins has no known function. Some of the sequences are annotated as ea10 however the function of this protein is unknown.	MSNIKKYIIDYDWKASIEIEIDHDVMTEEKLHQINNFWSDSEYRLNKHGSVLNAVLIMLAQHALLIAISSDLNAYGVVCEFDWNDGNGQEGWPPMDGSEGIRITDIDTSEIFDSDDMTIKAA*	mmseqs_cdd	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0012	cloud	direct	high	368	0.997	GCA_000520055.1_00777
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	794913	795782	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	6229	7098	GCA_000520055_1_1_711	GCA_000520055_1_1_711	-	5402276	.	PFAM:PF11438.7	Nun-like-transcription-termination-factor	MKKIDYKSIPKPIDSASERKKHKKEAEKLANYISFIRNNAHGDGDKKLLSDARTQAFGILRKQMQYRLHPGYIIEIRPTERQLFLLNSVFDFVNVVGDLIDRSVDKDPDTNSFLLTNKEYLYGKFGINGWQKYVRFLRAFVDAYKNSDMIYTYLPGGDNCTLSADNRIFIPVLGLGLINAVNEKDVIIVKQWRKYEGYRYLPCFDILKIQNKFYVKIKYKEDIFFLRKNKDLLQELSGTIDVILGSRFIKELKESRSFSRVEISESELWGISNNPVNHAHQRNPNKKWS*	phrogs_hmm	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0013	cloud	direct	high	869	0.999	GCA_000520055.1_00778
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	795791	796114	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	7107	7430	GCA_000520055_1_1_712	GCA_000520055_1_1_712	-	5402276	.	pfam11438	36-mer N-terminal peptide of the N protein (N36). The arginine-rich motif of the N protein is involved in transcriptional antitermination of phage lambda. N36 forms a complex with boxB RNA by binding tightly to the major groove of the boxB hairpin via hydrophobic and electrostatic interactions forming a bent alpha helix.	MDAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRPILSLNRKPKSRVESALNPIDLTVLAEYHEQIESNLQRIERKNHRVWYSKPGEFGITCQGRQKVKGESIPLA*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0014	cloud	direct	high	323	0.997	GCA_000520055.1_00779
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	796467	796871	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	7783	8187	GCA_000520055_1_1_713	GCA_000520055_1_1_713	-	5402276	.	.	hypothetical protein	MIRIAALLSILLTTSANSECWIVTNLHGYGAMNGDRYEFTKDSTEDSVFNVTINGDKSSVYESVSGVYPEMKYTALSSNTMVGEYQSGGGITVETWSITTDKKALYSKVMNIPGMQQLTSTKSFVGDVVGTCNQ*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0015	cloud	direct	high	404	0.998	GCA_000520055.1_00780
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	796868	797500	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	8184	8816	GCA_000520055_1_1_714	GCA_000520055_1_1_714	-	5402276	.	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) [Transcription, Signal transduction mechanisms]. 	MSISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGTSDSNVRFVGHVEPKGKYPLISMVRAGSWCEACEPYDIKDIDEWYDSDVNLLGNGFWLKVEGDSMTSPVGQSIPEGHMVLVDTGREPVNGSLVVAKLTDANEATFKKLVIDGGQKYLKGLNPSWPMTPINGNCKIIGVVVEARVKFV*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0016	cloud	direct	high	632	0.998	GCA_000520055.1_00781
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	797604	797819	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	8920	9135	GCA_000520055_1_1_715	GCA_000520055_1_1_715	+	5402276	.	PRK09706	transcriptional repressor DicA; Reviewed	MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGTKRGKAA*	mmseqs_cdd	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0017	cloud	direct	high	215	0.995	GCA_000520055.1_00782
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	797939	798232	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	9255	9548	GCA_000520055_1_1_716	GCA_000520055_1_1_716	+	5402276	.	pfam05269	Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	MVRANKRNEALRIESALLNKIAMLGTEKTAEAVGVDKSQISRWKRDWIPKFSMLLAVLEWGVVDDDMARLARQVASILTNKKRPAATERSEQIQMEF*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0018	cloud	direct	high	293	0.997	GCA_000520055.1_00783
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	798265	798540	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	9581	9856	GCA_000520055_1_1_717	GCA_000520055_1_1_717	+	5402276	.	PFAM:PF04492.12	Replication-protein-O	MTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFKVLLAILRKTYGWNKPMDRITDSQLSEPPRESWRLNFLRKR*	rep_hall_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0019	cloud	direct	high	275	0.996	GCA_000520055.1_00784
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	798546	798872	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	9862	10188	GCA_000520055_1_1_718	GCA_000520055_1_1_718	+	5402276	.	PFAM:PF06504.10	Replication-protein-C	MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0020	shell	direct	high	326	0.997	GCA_000520055.1_00785
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	798872	799759	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	10188	11075	GCA_000520055_1_1_719	GCA_000520055_1_1_719	+	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0021	shell	direct	high	887	0.999	GCA_000520055.1_00787
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	799858	800559	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	11174	11875	GCA_000520055_1_1_720	GCA_000520055_1_1_720	+	5402276	.	PFAM:PF06992.10	Replication-protein-P	MKNIAAQMVNFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQNELNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVIAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDAELRRKAADELSCMTARINRGEAIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV*	rep_hall_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0022	cloud	direct	high	701	0.999	GCA_000520055.1_00788
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	800556	800846	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	11872	12162	GCA_000520055_1_1_721	GCA_000520055_1_1_721	+	5402276	.	PFAM:PF04079.15	Ren-like-exclusion-protein	MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRFATREEREGKMSTNLIFKECRQSAAMKRVLAVYGVKR*	phrogs_hmm	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0023	shell	direct	high	290	0.997	GCA_000520055.1_00789
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	800920	801360	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	12236	12676	GCA_000520055_1_1_722	GCA_000520055_1_1_722	+	5402276	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQPTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARWGDRAA*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0024	shell	direct	high	440	0.998	GCA_000520055.1_00790
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	801357	801884	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	12673	13200	GCA_000520055_1_1_723	GCA_000520055_1_1_723	+	5402276	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTIKSNTPAHDKDCWQTPLWLFDALDIEFGFWLDSAASDKNALCAHWLTEADDALNSEWISHGAIWNNPPYSNIRPWVEKAAEQCIQQRQTVVMLVPEDMSVGWFSKALESVDEVRIITDGRINFIEPSTGLEKKGNSKGSMLLIWRPFISPRRMFTIVSKAALMAIGQGVRRAA*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0025	shell	direct	high	527	0.998	GCA_000520055.1_00791
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	802567	804339	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	13883	15655	GCA_000520055_1_1_724	GCA_000520055_1_1_724	-	5402276	.	.	hypothetical protein	MIPNSTSNKGYVCIDMQCSSTSEPTASTSSNRSIKLAASTNVYPITRNDSELTLNDFLDNSSSTSSLDYINELGSQLTLNDFLDNIKTNEVDRTCTDVVINIPQEIQTNTQENDLLLSDKNNSICIEIDERITKILTCKQKYQLDSIIHEIIPKENESAETVLHLMRVLNDQYHQVYNQSGCFYKAYMAIHNKIEQILPYAFRAGGGISIHLLIQALFFNGDYNKSPSQSQQPSLYTSPSPTINTEAFLSNVLSLDITQVRILGDLLSATLFHAPTIFYQYPKLIDEVKYCISNKKITGSVIARFTLCLTSTLLTMSPLLMLNGAVKTGSIVRTIGRGVSYADIPLALAILGDSWYKAYKHGSSDNPNSAQRFISQEAAFKTTQRVLTQGLSLMSSLSGAIMRSLEKGTPPQMMSLFIVNILNLLFHQNPYEGASASANALKRSTYSHNPDILNTQAIALCVDLQHTKNITMPLFKTKDRISYAFNGQRTSPEDQKQILKEVINSCTQGERAILNTSQSETCKHKIDEIYEKRFSETELNTLPNEMKNFLIFLNKTHEKDISRLSIGNEVNEKIIAVIVKTLAYRESMLC*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0026	cloud	direct	high	1772	0.999	GCA_000520055.1_00792
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	804776	804892	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	16092	16208	GCA_000520055_1_1_725	GCA_000520055_1_1_725	+	5402276	.	.	hypothetical protein	MQLFSPSWYCGNTDIHSFGELCSGGQIQKTITEEEGDG*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0027	cloud	direct	high	116	0.991	GCA_000520055.1_00793
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	804885	805451	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	16201	16767	GCA_000520055_1_1_726	GCA_000520055_1_1_726	+	5402276	.	PFAM:PF05551.10	homing-endonuclease	MAKPARRRCNRKREDLTVKRIFELLSFDKSTGVFRWKVPTQGRIALNSVAGAFDSNGYSMIMIDGRRYKTHVLVFYITHNRWPAGQIDHVNGIRTDNRPENLRECLPIENSRNIRIRKNSKSGCRGVTWHKRQKKWNVRLGFHGKSKHFGCFDDLELAVLVAEEARDKYYGDFSGNERSTYANLSKEM*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0028	cloud	direct	high	566	0.998	GCA_000520055.1_00794
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	805426	806037	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	16742	17353	GCA_000520055_1_1_727	GCA_000520055_1_1_727	+	5402276	.	PFAM:PF05766.11	NinG-recombination-protein	MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREEQKQKDKLKIQKLALKPRSYWIKQAQQAVNAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIGQEAVDEIESNHNRHRWTVEECKAIKAEYQQKLKDLRNSRSEAA*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0029	cloud	direct	high	611	0.998	GCA_000520055.1_00795
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	806034	806699	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	17350	18015	GCA_000520055_1_1_728	GCA_000520055_1_1_728	+	5402276	.	cd07424	PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm.  The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine.  This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-).  The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes.  Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes.  PPPs belong to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets.  This domain is thought to allow for productive metal coordination.	MNIYERIDGSKYRNIWVAGDLHGCYTNLMNKLDTIGFDTKKDLLISVGDLVDRGTENVECLELITFPWFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKETLAKVLAHKAEELPLIIELVSKDKKYVICHADYPCDKYEFGKPVDHQQVIWNRERISNSQDGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFCGNLTLIQVQGEGA*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0030	cloud	direct	high	665	0.998	GCA_000520055.1_00796
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	806911	807870	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	18227	19186	GCA_000520055_1_1_729	GCA_000520055_1_1_729	-	5402276	.	3FID_B	Putative outer membrane protein (LpxR)	MKKSVIAGVFIALSFTTCSAIANSLALSLANDDAGKFQPILNDIYGNKHENRDDYSQGLFLGYSHDISDSSQLSLHIAQDIYSPSGSNKRHNTAVTGDRAFSAYTHTGIEWNSLANDWIRYRLGTDIGVVGPDAGGQKVQNKAHEIIGAEKYHAWDDQIENRYGYTVKGMLSMTPSMDILGANVGLYPEVSAVTGNLFQYVAYGATIAIGNDKTFNSDNGFGLLAPRGLMHMSDTSGFKYKIFAGMERRDVNRNYTLEGKTIQTKQTTVSLNKTVDEYQVGATIGYAPVAFTLAFNKVTSEFKTGDDYSFINGAITFFF*	hhsuite_tools	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0031	cloud	direct	high	959	0.999	GCA_000520055.1_00797
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	807949	808179	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	19265	19495	GCA_000520055_1_1_730	GCA_000520055_1_1_730	+	5402276	.	.	hypothetical protein	MMFYNCVRQLIYSFFIAVLLSFNVTVFLLSVFAWCFMFFIIFILLNLNALVMAILYSNIRTVTKKGGQLQVVMDDE*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0032	cloud	direct	high	230	0.996	GCA_000520055.1_00798
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	808344	809033	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	19660	20349	GCA_000520055_1_1_731	GCA_000520055_1_1_731	+	5402276	.	pfam06323	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	MNTQYLQYVREQLMAATADLNGATKGQLEAWQEHAQFDTGTYKRKKPRILDVVTGKMITLDNTPTSGKQSYAKGSSIALVSPVEFSTSSWRRAVLSLDEHQKAWLLWCYSESVRWGHQVTITQWAWSEFKDLLSNRKIAGKTLDRLKTLIWLAAQDVKSELAGREAYEYQTLASLVGVTTKNWSETFTERWVAMKHIFLQLDSDALLLVTRTRSKQKAAFLQQNIAKLD*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0033	cloud	direct	high	689	0.999	GCA_000520055.1_00799
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	809218	809961	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	20534	21277	GCA_000520055_1_1_732	GCA_000520055_1_1_732	+	5402276	.	.	hypothetical protein	MLSSCIGVVMKDGALLRSSSLFIAYMGCLGWGSAYFYGWGTSFYYGFPWWIVGAGVDDVARSLFFAVIVIAIFLIGWGIGVVFFFAVKRKHSMQELNVFRLYFAVELLFVPAIIEFSILRQKIQVPLLLLSAAIALAVTISIRSYGRFLSVSCFYDKPFIKKHFFEIVMIAFVAYFWLFSFLTGYYKPQFKKEYEMINYNDGWYYVLARYDNCLVLSTSFNAGSKRFVIYQSAQDKNLQVDIVRTRI*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0034	cloud	direct	high	743	0.999	GCA_000520055.1_00800
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	810504	812354	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	21820	23670	GCA_000520055_1_1_733	GCA_000520055_1_1_733	+	5402276	.	6YP6_A	NanS-p	MSIKHYDVVRAASPSDLAEKLTHKLKEGWQPYGGPVAITPYTLMQAVAIEGEPQVGPSSEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLISRTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLVLEINAPAA*	hhsuite_tools	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0035	cloud	direct	high	1850	0.999	GCA_000520055.1_00801
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	812507	812722	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	23823	24038	GCA_000520055_1_1_734	GCA_000520055_1_1_734	+	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIKEDRRKAARGE*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0036	persistent	direct	high	215	0.995	GCA_000520055.1_00802
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	812727	813071	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	24043	24387	GCA_000520055_1_1_735	GCA_000520055_1_1_735	+	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0037	cloud	direct	high	344	0.997	GCA_000520055.1_00803
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	813122	813655	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	24438	24971	GCA_000520055_1_1_736	GCA_000520055_1_1_736	+	5402276	.	CDD:COG3772	lysozyme	MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWDIDR*	common_virus_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0038	shell	direct	high	533	0.998	GCA_000520055.1_00804
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	813876	813989	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	25192	25305	GCA_000520055_1_1_737	GCA_000520055_1_1_737	+	5402276	.	.	hypothetical protein	MKGIEVETPASLDLTRAAAFAIRIVAIAVLVWAIRWW*	.	hypothetical_protein	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0039	cloud	direct	high	113	0.991	GCA_000520055.1_00805
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	813934	814458	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	25250	25774	GCA_000520055_1_1_738	GCA_000520055_1_1_738	+	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGALSLGLNHYRDHAIIYKEQRDKKASELELANATITDMQIRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINANCPGSLRKAPITSGVDNATGPRLAEAAERDYFILRERLMAMQKQLEGAQEYIRTQCIP*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0040	cloud	direct	moderate	467	0.89	GCA_000520055.1_00806
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	814924	815238	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	26240	26554	GCA_000520055_1_1_739	GCA_000520055_1_1_739	+	5402276	.	pfam06069	PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	MLHDHVAECLEKKGLYRRAAERWAKVMVQLSDDQKRKVAAQKRAECLRKARRTPVSPVNLTEIKQAVNRLHSELGMGFEERRVFRRYKGTGEQNTSGNARSKKC*	mmseqs_cdd	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0041	cloud	direct	high	314	0.997	GCA_000520055.1_00807
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	815939	816448	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	27255	27764	GCA_000520055_1_1_740	GCA_000520055_1_1_740	+	5402276	.	CDD:COG4220	terminase	MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0042	cloud	direct	high	509	0.998	GCA_000520055.1_00808
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	816420	818348	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	27736	29664	GCA_000520055_1_1_741	GCA_000520055_1_1_741	+	5402276	.	PFAM:PF05876.11	Large-Terminase	MNISEQQLNNMMAAVSVALQPLVRVVPMTAVEWADQNYYLPKESSYGEGEWKTLPFQIAIMNCMGNDQVRTVNLIKSARVGYTKMLLGVVGYFIEHKSRNSLLFQPTDSAAEDFMKSHVEATIRNVPCLKDLSPWLGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGTCQIEKAANESAHFMRFYVPCPHCGEAQYLKFGDESTPFGLKWEKDSPESVFYLCEHHGCVIHQSELDQSNGRWICENTGMWTRDGLTFFSARGDEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVVHYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDAAINKKYCHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0043	cloud	direct	high	1928	0.999	GCA_000520055.1_00809
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	818332	818538	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	29648	29854	GCA_000520055_1_1_742	GCA_000520055_1_1_742	+	5402276	.	PDB:2L6Q_A	Head-Tail-Connector-Protein	MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0044	cloud	direct	high	206	0.995	GCA_000520055.1_00810
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	818535	820127	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	29851	31443	GCA_000520055_1_1_743	GCA_000520055_1_1_743	+	5402276	.	CDD:COG5511	Major-Capsid-protein	MKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMSGEIDVEEKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGMGNRFLRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQEQKDNPLINILEKFSSWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIAARLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0045	cloud	direct	high	1592	0.999	GCA_000520055.1_00811
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	820117	821622	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	31433	32938	GCA_000520055_1_1_744	GCA_000520055_1_1_744	+	5402276	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLADELVNASDAISVMATALNSNVRGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLATMLAGQQGMSVAQARAILAAAAPQQPVASTQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAASPQADAGPSLRDQIMALDEAKGAEAQAEQLAACPGMTVESARAVLAAGSGKAEPVSASTTALFERIMANHSPAAVQGGVPQTSADGDADVKMLMAMP*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0046	cloud	direct	high	1505	0.999	GCA_000520055.1_00812
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	821659	822006	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	32975	33322	GCA_000520055_1_1_745	GCA_000520055_1_1_745	+	5402276	.	pfam02924	Bacteriophage lambda head decoration protein D. 	MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEATGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSVDEHKKANAFAGSALSHAALP*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0047	cloud	direct	high	347	0.997	GCA_000520055.1_00813
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	822064	823092	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	33380	34408	GCA_000520055_1_1_746	GCA_000520055_1_1_746	+	5402276	.	PDB:3BQW_A	Capsid-protein	MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDPTHDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGTLVLGNTAADGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0048	cloud	direct	high	1028	0.999	GCA_000520055.1_00814
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	823144	823527	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	34460	34843	GCA_000520055_1_1_747	GCA_000520055_1_1_747	+	5402276	.	PFAM:PF14000.5	DNA-packaging-protein	MATKEENQKRLRQLAGLLGREADMSGSAADIAQRVSEWEEELAASREGIMPGDESGPEQNHTDDGEQLHNTDATDDVKAVRVRKCLHVMGYCPETGRPVELTYRGMRVLVPSPLATAMIQHGTAEHA*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0049	cloud	direct	high	383	0.997	GCA_000520055.1_00815
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	823520	823969	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	34836	35285	GCA_000520055_1_1_748	GCA_000520055_1_1_748	+	5402276	.	CDD:pfam05354	Head-Tail-Connector-Protein	MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKATAGISIS*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0050	cloud	direct	high	449	0.998	GCA_000520055.1_00816
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	824037	824609	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	35353	35925	GCA_000520055_1_1_749	GCA_000520055_1_1_749	+	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHVSTNVPGSDELNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWFSVMAGPSVRVNELFSAYAMAGVSYSRVSTFSGDYLQVTDNKGKTHDVLTGSDDGRHSNTSLAWRAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0051	shell	direct	high	572	0.998	GCA_000520055.1_00817
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	824674	825987	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	35990	37303	GCA_000520055_1_1_750	GCA_000520055_1_1_750	+	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEAMRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESSQSAADAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0052	cloud	direct	high	1313	0.999	GCA_000520055.1_00818
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	825989	826258	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	37305	37574	GCA_000520055_1_1_751	GCA_000520055_1_1_751	+	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQRLCGCGKHDGREHVQSLTAQLRLGPADILESDENGIIPEQDRVITQVVILDTDKKLIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0053	cloud	direct	high	269	0.996	GCA_000520055.1_00819
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	826364	827245	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	37680	38561	GCA_000520055_1_1_752	GCA_000520055_1_1_752	+	5402276	.	4LRJ_A	Effector NleH1 (E.C.2.7.11.1)	MLSPSSVNLGCSWNSLTRNLTSPDSRILSSVRDAAASSDNGAQVKVGNRTYRVVVTDNKFCVTRESHSGCFTNLLHRLGWPKGEISRKIEVMLNSSPVNRAMERGAVHSNRPDLPPVDYAPPELPSVDYNSLPVPGNVIGKGGNAVVYEDAEDATKVLKMFTTSQSNEEVTNEVRCFNQYYGAGSAEKIYGDNGDIIGIRMDKINGESLLNISSLPAQAEHAIYDMFDRLEQKGILFIDTTETNVLYDRTRNEFNPIDISSYNISERSWSENQIMQSYHGGKQDLISVVLSKI*	hhsuite_tools	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0054	cloud	direct	moderate	608	0.689	GCA_000520055.1_00820
GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote	cenote	CDS	827469	828296	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C37	38785	39612	GCA_000520055_1_1_753	GCA_000520055_1_1_753	+	5402276	.	pfam16374	Cycle inhibiting factor (CIF). Cycle inhibiting factors (Cif) are bacterial effectors that interfere with the eukarytoc cell cycle. CIF induce an irreversible cell cycle arrest upon injection into host cell. CIF blocks degradation of cyclin -dependent kinase inhibitors p21 and p27, inducing their accumulation in the cell. The x-ray crystal structure of Cif reveals it to be a divergent member of a superfamily of enzymes including cysteine proteases and acetyltransferases.	MKDITLPPPTSASCLTGAISVNTEAVLSPMQHTSALHVRDFASLCSQNLKANVLLNSDDHEVPIHQKNPAAIMQNIDSNIKQMATDWGMSIEEVEVIIGREKGIVEPSCGVTANAIMKLFLDKDGFSYCFENEQTLSLEQLQERLSCMPECKSFVLRVNDGALGHAYIVDIPKGENSCRPAFLYQSDLGEGVTRKLRFEDWMTHKALTPILLDDICNYFSCMSQNKTDLEQIATLFDIDGNVKMLRKENIQYQKHDNFSFQLFEYDTDNIEKTLR*	mmseqs_cdd	nonviral_gene	C37	39612	788685	828297	GCA_000520055.1|CP006262.1@region_788686_828297@tool_cenote_CDS_0055	cloud	direct	high	827	0.999	GCA_000520055.1_00821
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1061781	1062059	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	1	279	GCA_000520055_1_1_957	GCA_000520055_1_1_957	+	5402276	.	PRK14439	acylphosphatase; Provisional	MSKVCIIAWVYGRVQGVGFRYTTQYEAKKLGLSGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0001	persistent	direct	high	278	0.996	GCA_000520055.1_01036
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1062056	1062385	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	276	605	GCA_000520055_1_1_958	GCA_000520055_1_1_958	-	5402276	.	PRK11508	sulfurtransferase TusE. 	MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0002	persistent	direct	high	329	0.997	GCA_000520055.1_01037
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1062476	1063135	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	696	1355	GCA_000520055_1_1_959	GCA_000520055_1_1_959	-	5402276	.	PRK10447	FtsH protease modulator YccA. 	MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0003	persistent	direct	high	659	0.998	GCA_000520055.1_01038
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1063954	1064280	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	2174	2500	GCA_000520055_1_1_960	GCA_000520055_1_1_960	+	5402276	.	PFAM:PF06504.10	Replication-protein-C	MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0004	shell	direct	high	326	0.997	GCA_000520055.1_01039
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1064280	1065167	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	2500	3387	GCA_000520055_1_1_961	GCA_000520055_1_1_961	+	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0005	shell	direct	high	887	0.999	GCA_000520055.1_01041
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1065207	1065875	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	3427	4095	GCA_000520055_1_1_962	GCA_000520055_1_1_962	-	5402276	.	PDB:1Z19_B	Integrase	MGRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRSIGLGRVRKTSVAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFSLKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTG*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0006	cloud	direct	high	668	0.999	GCA_000520055.1_01042
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1065853	1066095	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	4073	4315	GCA_000520055_1_1_963	GCA_000520055_1_1_963	-	5402276	.	PFAM:PF13986.5	excisionase	MYELTLSPAEIKEITKYERYTKQQHQLRLHGIPFVIGPKNEPIVLRRDIPHGLTTMPKTSELVSAEPDFEALNNGKTKKK*	phrogs_hmm	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0007	cloud	direct	high	242	0.996	GCA_000520055.1_01043
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1066163	1068598	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	4383	6818	GCA_000520055_1_1_964	GCA_000520055_1_1_964	-	5402276	.	PRK09709	exodeoxyribonuclease VIII. 	MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFTWQFLEQYPAAQDCAYKFLVCEDKPGMPRPAIDSWDTEYMQENRWDEESASFIPVEPESDPINVNFDKLSLEVQNAVLVKFGTCENITVDMAIDAQELLQEDVATFDGHIVEALMKTPEINAMYPERKLFAIGWVKHKCKPGTKWPEIQAELRNWKKRQDAERKETGKYTSVVDLARAKANRQHTENPAEKIPPVTAAIHREYKQTWKTLDRELAYYLWPGDADAGNIDGSILRWAKNEVIARDREDWKRISASMRKQPDALRYSRQTIFGLVRERPIDIHKDPVALNKYITEYLTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPDNEKTECKVEVEPSVEREGPFYFLFTDKDGEKYGRANKLSGLDKALAAGATEITKEEYLARKNGTYTDLPQNVDTAEDSVQPEPVKVTADEVNKIMQAANISQPDADKLLAASRGEFVEGISDPNDPKWVKGIETCDSVNQNQSETEQNDQKAEQNSPNALQDEPETKQSEPVAQQEEEKVCTACGQSGGGNCPDCGAVMGDATCQETFDEENQAEAQEEMEGSGGDHYHTTDNESGETANPLIKVNGHREITSTSRLWHHLMIDLETMGKNPDAPIISIGAIFFDPQTGEMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAILTDEIPLDDALLQLREFIDENSGEFFVQVWGNGATFDNVILRRSYERQGIPCPWRYTNDRDVRTMVALGLMMDFDARTTIPFEGERHNALNDARYQAKYVSAIWQKLLPSQADF*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0008	shell	direct	high	2435	1.0	GCA_000520055.1_01044
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1068692	1068883	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	6912	7103	GCA_000520055_1_1_965	GCA_000520055_1_1_965	-	5402276	.	PF07358.11	Protein of unknown function (DUF1482)	MNTTFALVLTVYLVSGESLELVTGLYGSMKECMAAAAEQKIPGNCYPVDKTTHTNNNEIPAGL*	hhsuite_tools	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0009	cloud	direct	high	191	0.995	GCA_000520055.1_01045
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1068880	1069068	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	7100	7288	GCA_000520055_1_1_966	GCA_000520055_1_1_966	-	5402276	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	MEKLSCNASTSELRFEIGVITGDKTFIEDAIKQRKLEQDLLNEVCIPSMLARLDLLQKGYKQ*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0010	cloud	direct	high	188	0.995	GCA_000520055.1_01046
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1069524	1069712	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	7744	7932	GCA_000520055_1_1_967	GCA_000520055_1_1_967	-	5402276	.	.	hypothetical protein	MVLVECFSQVYVSWYSECPTCPQAYQYLNNSFEPPYKTPSCCWGYPDYTDFLSLGNDGNHLA*	.	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0011	cloud	direct	high	188	0.995	GCA_000520055.1_01048
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1069772	1070218	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	7992	8438	GCA_000520055_1_1_968	GCA_000520055_1_1_968	+	5402276	.	PF18186.1	SMODS and SLOG-associating 2TM effector domain family 4	MDRDDILDRVLYGYFLEQLFSVATGRLDKLLSVVSIILGLSVIGGFIPEVSGVLIVVIATVQTIYGFGQKSGNAMRKSAEYLQLYDDAEKYSDSELKMQLKLLEKTDDNIWSSLKDIAILKNQIKIGISVEQQEKLSAKSKLMRFLCG*	hhsuite_tools	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0012	cloud	direct	high	446	0.998	GCA_000520055.1_01049
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1070317	1070469	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	8537	8689	GCA_000520055_1_1_969	GCA_000520055_1_1_969	-	5402276	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MDMLNLGNNESLVCGVFPNLDGTFTAMTYTRSKTFKTEAGARRWLARNSD*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0013	shell	direct	high	152	0.993	GCA_000520055.1_01050
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1070742	1071032	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	8962	9252	GCA_000520055_1_1_970	GCA_000520055_1_1_970	-	5402276	.	PFAM:PF05016.14	toxin	MLPILWLPSARDDLRQIVAYIAKENPPAARRLKIRIETSVLSLSEHPYLYPPSERALGLREIVTHPNYIILYRVTASNIEIVNVVHSRRQYPNKSC*	phrogs_hmm	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0014	cloud	direct	high	290	0.997	GCA_000520055.1_01051
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1071032	1071223	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	9252	9443	GCA_000520055_1_1_971	GCA_000520055_1_1_971	-	5402276	.	5CW7_E	PaaA2, Plasmid stabilization protein ParE	MSTVLSPIISEFETIEQENSYNEWLRTKVAASLADPRPAIPHDEVMAEMENLIAQIASTNRSE*	hhsuite_tools	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0015	cloud	direct	high	191	0.995	GCA_000520055.1_01052
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1071241	1071741	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	9461	9961	GCA_000520055_1_1_972	GCA_000520055_1_1_972	-	5402276	.	PFAM:PF10078.8	transcriptional-regulator	MKRKPLSEIDLQAAQRLKEIWTTKKTQLGLTQERAAEILGFSTQGAVSHYLNGQTPLNLEAVIKFAGLLQVPPESIRPDMADLLRIVRMYPQELQQDNVVALPAEMEQSENELPFNLEPIERDLIQTFRAFPKEDKEKMLKEMKEKKESIEETVARWLEAQKGRRA*	phrogs_hmm	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0016	cloud	direct	high	500	0.998	GCA_000520055.1_01053
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1071849	1071992	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	10069	10212	GCA_000520055_1_1_973	GCA_000520055_1_1_973	+	5402276	.	PFAM:PF10078.8	transcriptional-regulator	MNLGEYLHHSRITQKDFAEIVGVTQGMVSHVITGRAKLTGGESFTLV*	phrogs_hmm	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0017	cloud	direct	high	143	0.993	GCA_000520055.1_01054
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1071937	1072113	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	10157	10333	GCA_000520055_1_1_974	GCA_000520055_1_1_974	+	5402276	.	PFAM:PF10078.8	transcriptional-repressor	MLLLDGRNLRGGKVLRWCEATGWVVTPHEIDSSTYPNPTDGIPVDYQANTQPALGVDS*	phrogs_hmm	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0018	cloud	direct	high	176	0.994	GCA_000520055.1_01055
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1072110	1072535	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	10330	10755	GCA_000520055_1_1_975	GCA_000520055_1_1_975	+	5402276	.	pfam06254	Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	MKIKHEHIRMAMNAWAYPDGEKVPAAEIARTYFELGMTFPELYDDSHPEALARNTQKNFRWVEKDTPDAVEKIQALLPAIEKAMPPLLVARMRSHSSAYFRELVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNAVAVH*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0019	cloud	direct	high	425	0.998	GCA_000520055.1_01056
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1072607	1073713	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	10827	11933	GCA_000520055_1_1_976	GCA_000520055_1_1_976	+	5402276	.	PFAM:PF09681.9	phage-replisome-organiser	MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGNISQTAKSPAERKRAQRERERKREQNGDCHGASRNVTHMSRRVTTDKDTDKDTDKDTDKDTDKDTDQEDQNTMVHGVKNATNQAGDVQTVNPGQPAGTTPEADSAYALKADSGAVQQVMTARPEQSHQLQQPEADSAIQREADRVVPENTGQPVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWKARLREGVPPEAILDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGTNNQRCVNHISEPDTEIPPGFRG*	rep_hall_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0020	cloud	direct	high	1106	0.999	GCA_000520055.1_01057
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1073720	1074466	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	11940	12686	GCA_000520055_1_1_977	GCA_000520055_1_1_977	+	5402276	.	PDB:4M4W_K	Replicative-helicase	MKNIAAAGVLERIRRLAPQASVPPYRTVEEWREWQLVEGRKRSEEINRQNHQLRVEKILNRSGIQPLHSKCSFANYQVQNDGQKYALSQAKSIADELMTGCTNFVFSGKTGTGKNHLAAAMGNRLMAKGRSVIIVTVSDVMSVLHDSYDNGKSGEKFLQELCSVDLLVLDEIGVQRETKNEQVVLHQIIDRRTASLCSVGMLTNLNHAAMSTLLGERIMDRMTMNGGRWVTFNWDSWRPNVSNMRVVK*	rep_hall_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0021	cloud	direct	high	746	0.999	GCA_000520055.1_01058
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1074488	1075258	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	12708	13478	GCA_000520055_1_1_978	GCA_000520055_1_1_978	+	5402276	.	PFAM:PF04079.15	MarR-family-transcrition-regulator	METVSDALKALKKASSHVVAARLGISREEAVNELWELKRNGVVDKTGHTWFLAGEGESRVTEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMPGDNLPAEPKAALVTESDGKAFPQPAGAALPVREAATQEEIKTETVADIVQPLPSFTETQADELIFPSLRRANLALRRAKSDVQKWERVCAALRELNKHRDIVRQITDSSRRVVSEK*	phrogs_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0022	cloud	direct	high	770	0.999	GCA_000520055.1_01059
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1075274	1075687	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	13494	13907	GCA_000520055_1_1_979	GCA_000520055_1_1_979	+	5402276	.	pfam06163	Bacterial protein of unknown function (DUF977). This family consists of several hypothetical bacterial proteins from Escherichia coli and Salmonella typhi. The function of this family is unknown.	MAKVFTQEEREKIKGQVVELVRRSGRETLRQLEAKTGATRYLMSVLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKLKKPVVVDPDLIWSLPDGEIRRYDRQLNIICSECRNSEVMQRVLIFYTGVMME*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0023	shell	direct	high	413	0.998	GCA_000520055.1_01060
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1076039	1076812	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	14259	15032	GCA_000520055_1_1_980	GCA_000520055_1_1_980	-	5402276	.	COG2819	Predicted hydrolase of the alpha/beta superfamily  [General function prediction only]. 	MTKHMDIHCQTRIFNSINHDTKYKICIFTPKNIKKNNATLYILDGNSANNYISDILPVIDALPNPPVLVTLGYESWNNLSIHRRAYDYTPDGENAIVDNSKPAWIYFTGGGSQSFRELLLTQIMPWVSTIAPNSSRIGIWGHSLGAIFVLDCLKNNSCFNYYYISAPSLLWQNERIIKIIKDDISESKHTKSICLLNGNLSLDYSASLYPEAIKAESVLRNILTEKYSNFSIVQFPELNHQETFSAALWNSIIHFSI*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0024	cloud	direct	high	773	0.999	GCA_000520055.1_01061
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1077178	1077315	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	15398	15535	GCA_000520055_1_1_981	GCA_000520055_1_1_981	-	5402276	.	.	hypothetical protein	MLTGAFLYLPLVFMPEADSLKHPQLFYLTSHYLANMKSVRKTDVP*	.	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0025	cloud	direct	high	137	0.993	GCA_000520055.1_01062
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1077360	1077572	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	15580	15792	GCA_000520055_1_1_982	GCA_000520055_1_1_982	+	5402276	.	pfam01848	Hok/gef family. 	MNGKSRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0026	shell	direct	high	212	0.995	GCA_000520055.1_01064
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1078020	1079069	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	16240	17289	GCA_000520055_1_1_983	GCA_000520055_1_1_983	+	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVLVPELGLVIVKPGRESMRVFHGGRVLVESEPKSMRNLPSGVVPAVRQPLAEDKSLLPFFSNERVIRAAGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAQQNLSAWMIDVIRHAMNGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKIRSVYRESDIIPGEQTATSILKQRTKNIALPPHTHQQQNPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPCACCGKPADAPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0027	shell	direct	high	1049	0.999	GCA_000520055.1_01065
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1079082	1079453	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	17302	17673	GCA_000520055_1_1_984	GCA_000520055_1_1_984	+	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MRIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAEVLIDDEQFDEINIVRGQPVPGGRLGVKIYEIRGGNDGA*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0028	cloud	direct	high	371	0.997	GCA_000520055.1_01066
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1079443	1079814	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	17663	18034	GCA_000520055_1_1_985	GCA_000520055_1_1_985	+	5402276	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MARDIQMVLERWGAWAANNHEDVTWPSIAAGFKGLIPTKVKSRPQCSDDDAMIICGCMARLNKNNQYLHDLLVDYYVGGMTFMALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0029	shell	direct	high	371	0.997	GCA_000520055.1_01067
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1079966	1080784	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	18186	19004	GCA_000520055_1_1_986	GCA_000520055_1_1_986	+	5402276	.	COG1266	Membrane protease YdiL, CAAX protease family  [Posttranslational modification, protein turnover, chaperones]. 	MWIVLVLSLSTLSWHKVVAFSLLTVSVVLAVLNDIIDWSVLFFVATIVFFIILKFNWKYNAWAKSIYEVGIVLSAIALSFHLWPGFHNPVVLNSVTVGPQSTPYTMYFNFDKALVPFLLVLCTSSLFKKEVKSEVSLWKWGALSLSVPLILFLAVFFGGLKPEIHFPEWLPEFILANLFFVSLAEESLFRGYIQSRLSEVTSPLVALIVAALLFGFYHYSGGALLVLFATLSGVVYGLSWMWSGRLWVATLFHFGLNLCHLLFFTYPFLKHN*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0030	cloud	direct	high	818	0.999	GCA_000520055.1_01068
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1081071	1081268	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	19291	19488	GCA_000520055_1_1_987	GCA_000520055_1_1_987	+	5402276	.	PF08221.11	RNA polymerase III subunit RPC82 helix-turn-helix domain	MLKQQDMTETARVVFDELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQCGCYRRLQS*	hhsuite_tools	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0031	cloud	direct	high	197	0.995	GCA_000520055.1_01069
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1081532	1082119	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	19752	20339	GCA_000520055_1_1_988	GCA_000520055_1_1_988	+	5402276	.	PRK09978	DNA-binding transcriptional regulator GadX; Provisional	MHYGKVKIFDINHSIVSQYLEIQHKLTRTHLTDVPLYLSLEPNNPALAEALITSQRFSGDTTDMFLMMACLSLFESDERILLFLSGCLSSISAKVRAIIQTDISASWTLGAIALRLHMSESLLKIKLKNEGHMFSRLLLEERMRVAVNMLCSRHGYGQAVAEKCGYSSWSYFISVFHRYYGFPPDRYVSRQGLDY*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0032	cloud	direct	high	587	0.998	GCA_000520055.1_01070
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1082888	1084738	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	21108	22958	GCA_000520055_1_1_989	GCA_000520055_1_1_989	+	5402276	.	6YP6_A	NanS-p	MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPYGGPVAITPYTLMQAVAIEGDPQVGPSSEPDWFYVVVLAGQSNGMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGESCTYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLIARTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLVLEINAPAA*	hhsuite_tools	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0033	cloud	direct	high	1850	0.999	GCA_000520055.1_01075
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1084891	1085106	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	23111	23326	GCA_000520055_1_1_990	GCA_000520055_1_1_990	+	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0034	persistent	direct	high	215	0.995	GCA_000520055.1_01076
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1085111	1085455	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	23331	23675	GCA_000520055_1_1_991	GCA_000520055_1_1_991	+	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0035	cloud	direct	high	344	0.997	GCA_000520055.1_01077
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1085506	1086039	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	23726	24259	GCA_000520055_1_1_992	GCA_000520055_1_1_992	+	5402276	.	CDD:COG3772	lysozyme	MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWDIDR*	common_virus_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0036	shell	direct	high	533	0.998	GCA_000520055.1_01078
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1086260	1086373	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	24480	24593	GCA_000520055_1_1_993	GCA_000520055_1_1_993	+	5402276	.	.	hypothetical protein	MKGIEVETPASLDLTRAAAFAIRIVAIAVLVWAIRWW*	.	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0037	cloud	direct	high	113	0.991	GCA_000520055.1_01079
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1086318	1086842	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	24538	25062	GCA_000520055_1_1_994	GCA_000520055_1_1_994	+	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGALSLGLNHYRDHAIIYKEQRDKKASELELANVTITDMQVRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINANCPGSLRKAPITSGVDNATGPRLAEAAERDYFILRERLMAMQKQLEGAQEYIRTQCIP*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0038	cloud	direct	moderate	467	0.89	GCA_000520055.1_01080
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1087308	1087622	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	25528	25842	GCA_000520055_1_1_995	GCA_000520055_1_1_995	+	5402276	.	pfam06069	PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	MLHDHVAECLEKKGLYRRAAERWAKVMVQLSDDQKRKVAAQKRAECLRKARRTPVSPVNLTEIKQAVNRLHSELGMGFEERRVFRRYKGTGEQNTSGNARSKKC*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0039	cloud	direct	high	314	0.997	GCA_000520055.1_01081
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1088323	1088832	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	26543	27052	GCA_000520055_1_1_996	GCA_000520055_1_1_996	+	5402276	.	CDD:COG4220	terminase	MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0040	cloud	direct	high	509	0.998	GCA_000520055.1_01082
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1088804	1090732	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	27024	28952	GCA_000520055_1_1_997	GCA_000520055_1_1_997	+	5402276	.	PFAM:PF05876.11	Large-Terminase	MNISEQQLNNMMAAVSVALQPLVRVVPMTAVEWADQNYYLPKESSYGEGEWKTLPFQIAIMNCMGNDQVRTVNLIKSARVGYTKMLLGVVGYFIEHKSRNSLLFQPTDSAAEDFMKSHVEATIRNVPCLKDLSPWLGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGTCQIEKAANESAHFMRFYVPCPHCGEAQYLKFGDESTPFGLKWEKDSPESVFYLCEHHGCVIHQSELDQSNGRWICENTGMWTRDGLTFFSARGDEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVVHYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDAAINKKYCHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0041	cloud	direct	high	1928	0.999	GCA_000520055.1_01083
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1090716	1090922	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	28936	29142	GCA_000520055_1_1_998	GCA_000520055_1_1_998	+	5402276	.	PDB:2L6Q_A	Head-Tail-Connector-Protein	MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0042	cloud	direct	high	206	0.995	GCA_000520055.1_01084
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1090919	1092511	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	29139	30731	GCA_000520055_1_1_999	GCA_000520055_1_1_999	+	5402276	.	CDD:COG5511	Major-Capsid-protein	MKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMSGEIDVEEKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGMGNRFLRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQEQKDNPLINILEKFSSWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIASRLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0043	cloud	direct	high	1592	0.999	GCA_000520055.1_01085
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1092501	1094006	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	30721	32226	GCA_000520055_1_1_1000	GCA_000520055_1_1_1000	+	5402276	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLADELVNASDAISVMATALNSNVRGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQPVASTQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAASPQADAGPSLRDQIMALDEAKGAEAQAEQLAACPGMTVESARAVLAAGSGKAEPVSASTTALFERIMANHSPAAVQGGVPQTSADGDADVKMLMAMP*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0044	cloud	direct	high	1505	0.999	GCA_000520055.1_01086
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1094043	1094390	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	32263	32610	GCA_000520055_1_1_1001	GCA_000520055_1_1_1001	+	5402276	.	pfam02924	Bacteriophage lambda head decoration protein D. 	MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEASGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPESVDEHKKANAFAGSALSHAALP*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0045	cloud	direct	high	347	0.997	GCA_000520055.1_01087
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1094448	1095476	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	32668	33696	GCA_000520055_1_1_1002	GCA_000520055_1_1_1002	+	5402276	.	PDB:3BQW_A	Capsid-protein	MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEIQAVNAVLYGKYTMEGDQFEKIEVDFGRSTKNNITQGSGKEWSKQDRDTFDPTHDLDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYIAEDGIEKRYLPEGMLVLGNTAADGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0046	cloud	direct	high	1028	0.999	GCA_000520055.1_01088
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1095528	1095902	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	33748	34122	GCA_000520055_1_1_1003	GCA_000520055_1_1_1003	+	5402276	.	PFAM:PF14000.5	DNA-packaging-protein	MATKEQNLKRLDELALILGREPDISGSAAEIAQRVAEWEEEIQSSGEDVQVGDTVIRERETAAHDVREDTSGALTRIRVLTCLHLCGIDGETGESVEIADVGRVILIMSSDAKTHVDGGMAVYA*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0047	cloud	direct	high	374	0.997	GCA_000520055.1_01089
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1095895	1096248	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	34115	34468	GCA_000520055_1_1_1004	GCA_000520055_1_1_1004	+	5402276	.	CDD:pfam05354	Head-Tail-Connector-Protein	MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGGEVQGVFDDPESLGFAGSGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0048	cloud	direct	high	353	0.997	GCA_000520055.1_01090
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1096264	1096797	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	34484	35017	GCA_000520055_1_1_1005	GCA_000520055_1_1_1005	+	5402276	.	PFAM:PF06763.10	minor-tail-protein	MAIKGLEQAIDNLSRVRKNAIPAASAMTINRVATTAINQSSSQVARETRVRRKLVKERSRLKRATVRNPNARIIVNRGDLPVIKLGIRMSGRRPDSILKAGQHRYQRAFIQRLKNGRWHVMQRVVGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPGELAYALKQQLRIAIKR*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0049	cloud	direct	high	533	0.998	GCA_000520055.1_01091
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1096794	1097189	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	35014	35409	GCA_000520055_1_1_1006	GCA_000520055_1_1_1006	+	5402276	.	PDB:3FZ2_G	Minor-tail-protein-	MKHTDIRAAVLDALELHEHGATLFDGRPVVFDEEDFPAVAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDSWMESRIYPAMTAIPALADLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0050	shell	direct	high	395	0.997	GCA_000520055.1_01092
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1097197	1097949	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	35417	36169	GCA_000520055_1_1_1007	GCA_000520055_1_1_1007	+	5402276	.	PFAM:PF16463.4	tail-tube-protein	MSTPNPLEPVKGAGTTLWVYNGQGDAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0051	cloud	direct	high	752	0.999	GCA_000520055.1_01093
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1097963	1098394	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	36183	36614	GCA_000520055_1_1_1008	GCA_000520055_1_1_1008	+	5402276	.	PFAM:PF06894.10	tail-assembly-chaperone	MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEQAESSGNLQVSVEDLVRTGAFLVAMSLWHNHPQKTASPSMNEAVMQIEQEVLTTWPADAIARAEDVVLRLSGMSGAVHADTDSTEVAKNNALTDDDFSAGKSSTAS*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0052	cloud	direct	high	431	0.998	GCA_000520055.1_01094
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1098421	1098834	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	36641	37054	GCA_000520055_1_1_1009	GCA_000520055_1_1_1009	+	5402276	.	PFAM:PF06223.11	Minor-tail-protein-	MGRPDWRAMLAGMTSTEYADWRHFYRTHYFLDTQLDMHFSGLTYAVLSLFFCDPDMHPSDFSLLAPRREEAQTEMPDEEKMLMQKAAVLAGGVRFGGDGGREILSSADVADVSEDDVALMMASAGISGGVRYVPAGW*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0053	cloud	direct	high	413	0.998	GCA_000520055.1_01095
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1098815	1101394	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	37035	39614	GCA_000520055_1_1_1010	GCA_000520055_1_1_1010	+	5402276	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MSQPVGDLVIDLSLDAVRFDEQMSRVRRHFSGLETDARKTAGVVEQNLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIATQLAGGQNPWLILLQQGGQVKDSFGGMIPMFRGLAGAITLPMVGVTSLAVATGALAYAWYQGDSTLSAFNKTLVLSGNQSGLTADRMLTLSRAGQAAGLTFNQASESLAALVNAGVRGGAQFDAINQSVARFASASGVEVDKVAEAFGKLTTDPTSGLMAMARQFRNVMAEQIAYVAQLQRSGDEAGALQAANDAATKGFDEQIRRLKENMGTLETWADKTGKAFKSMWDAILDIGRPESSADMLASAQKAFDEADKKWQWYQSRSQRRGKTSSFRANLQGAWDDRENARLGLAAATLQSDMEKAGELATRDRAERDASQLKYTGEAQKAYERLLTPLEKYTNRQEELNKALKDGKILQADYNTLMAAAKKDYESTLKKPKSSGVKVSAGERQEDLTHAALLALETELRTLEKHSGANEKISQQRRDLWKAESQFAVLEEAAQRRQLSAQEKSLLAHEQETLEYKRQLADLGDKVEYQKRLNELAQQAARFEQQQGAKQAAISAKARGLTDRQAQRESEEQRLRDVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGLKSGWGEWAESATDSFSQVKSVATQTFDGIAQNMAAMLTGSEQNWRGFTRSVLSMLTEIFLKQAMVGIVGSIGSAMGGAFGGGASASTGTAIQAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYAEGGYVGGAGSPAQMRRAEGISFNQNNHVVIQNDGTNGQAGPQLMKAVYDMARKGAQDEIQAQMRDGGVFSGGRR*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0054	shell	direct	high	2579	1.0	GCA_000520055.1_01096
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1101391	1101720	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	39611	39940	GCA_000520055_1_1_1011	GCA_000520055_1_1_1011	+	5402276	.	PFAM:PF05939.12	minor-tail-protein	MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVTLSVTREEARHLEAFLAEHGGWKAFLWTPPYAWRQIKVTCAAWSSRVRMLRVEFSAEFKQVVN*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0055	shell	direct	high	329	0.997	GCA_000520055.1_01097
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1101720	1102418	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	39940	40638	GCA_000520055_1_1_1012	GCA_000520055_1_1_1012	+	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQDIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEAVTWQGRQYQAYPIDGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSELTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCEMRRNVGNFGGFLSINKLSQ*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0056	cloud	direct	high	698	0.999	GCA_000520055.1_01098
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1102369	1103172	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	40589	41392	GCA_000520055_1_1_1013	GCA_000520055_1_1_1013	+	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGEWYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWWLVCRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQAGDILLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0057	persistent	direct	high	803	0.999	GCA_000520055.1_01099
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1103169	1103750	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	41389	41970	GCA_000520055_1_1_1014	GCA_000520055_1_1_1014	+	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGATMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKVPEYKSTDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGDGKVVVIGRQA*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0058	cloud	direct	high	581	0.998	GCA_000520055.1_01100
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1103941	1104468	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	42161	42688	GCA_000520055_1_1_1015	GCA_000520055_1_1_1015	-	5402276	.	PRK15388	superoxide dismutase [Cu-Zn]. 	MKCKIIAAIAMLTAASCGYAAEQEVPMNLVSADGKEVSIGKITIQETPYGLLFTPALHSLSEGIHGFHVHEKGNCAPALKDGKPVAALSAGGHFDPKNTGKHLGPWSPDGHLGDLPALFVTHDGKANYPVLAPRLNSLKEIKGRSLMLHAGGDNHHDHPEPLGGGGARMACGIIQ*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0059	cloud	direct	high	527	0.998	GCA_000520055.1_01101
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1104602	1108078	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	42822	46298	GCA_000520055_1_1_1016	GCA_000520055_1_1_1016	+	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGRAHTPVEAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLVETTSKGDRNPTSVRLLIQLERGGKWMTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGASFEPQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGLPPGEYTLTVRAINSYGQQGEPATTTFRINAPAVPATIELTPGYFQITAVPRLAVYDPTVQFEFWFSETKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAFVEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTSITETRNEITQTVSKTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPEGKLTARNADISGAITANTGTLNNVTINENCVIRGKLSANQIEGDLVKTVGKAFPRNNSYASGTVTVTVYDDQGFDRQIIIPPVLFRGTKHQNFNSPNQQSYWYSTCKLQVLKNGVEIFHEPATDVSRVFSSVIDMPAGRGHVTLTFNVSSAGANNWTPTTYISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0060	cloud	direct	high	3476	1.0	GCA_000520055.1_01102
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1108145	1108744	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	46365	46964	GCA_000520055_1_1_1017	GCA_000520055_1_1_1017	+	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAEYLHASTNVPGSDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNMSLAWGAGVQFNPIESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0061	shell	direct	high	599	0.998	GCA_000520055.1_01103
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1108809	1110122	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	47029	48342	GCA_000520055_1_1_1018	GCA_000520055_1_1_1018	+	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEVARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEDAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0062	cloud	direct	high	1313	0.999	GCA_000520055.1_01104
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1110124	1110393	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	48344	48613	GCA_000520055_1_1_1019	GCA_000520055_1_1_1019	+	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQRLCGCGKHDDRENGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENVGGMK*	mmseqs_cdd	common_virus	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0063	cloud	direct	high	269	0.996	GCA_000520055.1_01105
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1110520	1111272	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	48740	49492	GCA_000520055_1_1_1020	GCA_000520055_1_1_1020	-	5402276	.	pfam04806	EspF protein repeat. The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.	MINSINSFFSSIPRSISSVTRNSSFTASQHKSTPNTVKTSSPLSPSNSPASATTIFKVKNSYTESGLQRSTSYTQSSIEKNALHRPLPDVAKRLVQHLAEHGIQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHGIQPARNMAEHIPPAPNWPAPTPPIQNEQSRPLPDVAQRLVQHLAEHGIQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLMQHLAEHGINTSKRS*	mmseqs_cdd	nonviral_gene	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0064	cloud	direct	high	752	0.999	GCA_000520055.1_01106
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	CDS	1111718	1112101	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	49938	50321	GCA_000520055_1_1_1021	GCA_000520055_1_1_1021	-	5402276	.	.	hypothetical protein	MSGTSGSSSDAALATRYAAEYFCKTWTAPGLNQAEGYKAISDLSHHYFRAEGSSPPQSMATGINKVRCDAGMKEKHVNSLDIFTHSYPEIYAGVALTLAGVCSKDKQAMYNITQETVRILHETETKD*	.	hypothetical_protein	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_CDS_0065	cloud	direct	high	383	0.997	GCA_000520055.1_01107
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1388342	1389136	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	1	795	GCA_000520055_1_1_1291	GCA_000520055_1_1_1291	-	5402276	.	PRK09500	spermidine/putrescine ABC transporter membrane protein; Reviewed	MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0001	persistent	direct	high	794	0.999	GCA_000520055.1_01398
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1389303	1389773	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	962	1432	GCA_000520055_1_1_1292	GCA_000520055_1_1_1292	-	5402276	.	PDB:1Z19_B	Integrase	MLLAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGCRDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGVIPPAGKTPPTFHEQRSLSERLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWVKLVI*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0002	cloud	direct	high	470	0.998	GCA_000520055.1_01399
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1389942	1390421	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	1601	2080	GCA_000520055_1_1_1293	GCA_000520055_1_1_1293	-	5402276	.	pfam09003	Bacteriophage lambda integrase, Arm DNA-binding domain. The amino terminal domain of bacteriophage lambda integrase folds into a three-stranded, antiparallel beta-sheet that packs against a C-terminal alpha-helix, adopting a fold that is structurally related to the three-stranded beta-sheet family of DNA-binding domains (which includes the GCC-box DNA-binding domain and the N-terminal domain of Tn916 integrase). This domain is responsible for high-affinity binding to each of the five DNA arm-type sites and is also a context-sensitive modulator of DNA cleavage.	MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTDKGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKNGDIAATTHKEKARMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGL*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0003	cloud	direct	high	479	0.998	GCA_000520055.1_01400
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1390390	1390659	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	2049	2318	GCA_000520055_1_1_1294	GCA_000520055_1_1_1294	-	5402276	.	PFAM:PF11112.7	excisionase	MSEQYLITLDEWKPKRFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH*	phrogs_hmm	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0004	cloud	direct	high	269	0.996	GCA_000520055.1_01401
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1390721	1393192	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	2380	4851	GCA_000520055_1_1_1295	GCA_000520055_1_1_1295	-	5402276	.	PRK09709	exodeoxyribonuclease VIII. 	MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIICEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESYPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNTMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARTNQQHTENSTGKISPVIAAIHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEYLTTKGVFEDEGTNQSATDTLSSPVPETDAVETAIPDNEKTECKVEVEPSVEREGPFYFLFTDKDGEKYGRANKLSGLDKALAAGATEITKEEYFARKNSTYSGSQQNTGASDTTAQPEPVKVTADEVNKIMQAANISQPDADKLLAASRGEFVAGISDPNDPKWVKGIQTRDSVNQNQHESERNYQKAEQNSPNALQNEPETKQPEPVAQQEVEKACTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEKMEGAEHPHKENTGGNQHHDSDNETGETADHSIKVNGHQEITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADF*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0005	shell	direct	high	2471	1.0	GCA_000520055.1_01402
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1393316	1393477	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	4975	5136	GCA_000520055_1_1_1296	GCA_000520055_1_1_1296	-	5402276	.	pfam07358	Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	MNSAFALVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIH*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0006	shell	direct	high	161	0.994	GCA_000520055.1_01403
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1393474	1393662	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	5133	5321	GCA_000520055_1_1_1297	GCA_000520055_1_1_1297	-	5402276	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	METLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0007	shell	direct	high	188	0.995	GCA_000520055.1_01404
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1393673	1394065	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	5332	5724	GCA_000520055_1_1_1298	GCA_000520055_1_1_1298	-	5402276	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MSSEYTDSTGRKLPMYQITKNGFVFLVMGFTGKKAAAFKEAYIAEFDRMEKELRQNNAPSPDKMIHGDGRTLVIRLDEHGNIKFTETVPDGAMVCTLDTFQFYLEKQGWTLVNRSAIKNMTVEQLLKIHC*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0008	cloud	direct	high	392	0.997	GCA_000520055.1_01405
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1394149	1394475	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	5808	6134	GCA_000520055_1_1_1299	GCA_000520055_1_1_1299	+	5402276	.	PFAM:PF06504.10	Replication-protein-C	MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0009	shell	direct	high	326	0.997	GCA_000520055.1_01406
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1394475	1395362	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	6134	7021	GCA_000520055_1_1_1300	GCA_000520055_1_1_1300	+	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0010	shell	direct	high	887	0.999	GCA_000520055.1_01408
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1395244	1395840	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	6903	7499	GCA_000520055_1_1_1301	GCA_000520055_1_1_1301	-	5402276	.	pfam10554	Ash protein family. This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.	MLNVAIENQNGWNYSAPAPHKAGAGRGNPMMTTAHNRAHAFFLCVMHSHIQIMVGRAGQPKGWPVSVVTGISTPVRLTTLMVVESLGGELFKLTIEAAIMATIHTLSHPDVTIENGRAVTTSIAIAEFFGKRHERVLDKIRNLDCLNRPGFPGECFICELRLPDHRFRWKHNKLFLLLPEEYGPAFPAIVDCYTSPPT*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0011	cloud	direct	high	596	0.998	GCA_000520055.1_01409
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1396250	1396414	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	7909	8073	GCA_000520055_1_1_1302	GCA_000520055_1_1_1302	+	5402276	.	.	hypothetical protein	MNQLPRRALSRYGLTFQGNILSVNCQCRMLTRVRRTHSTSPVENSLITNLSFVG*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0012	shell	direct	high	164	0.994	GCA_000520055.1_01413
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1396418	1396636	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	8077	8295	GCA_000520055_1_1_1303	GCA_000520055_1_1_1303	-	5402276	.	.	hypothetical protein	MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0013	shell	direct	high	218	0.995	GCA_000520055.1_01414
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1396666	1396794	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	8325	8453	GCA_000520055_1_1_1304	GCA_000520055_1_1_1304	-	5402276	.	.	hypothetical protein	MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0014	shell	direct	high	128	0.992	GCA_000520055.1_01415
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1396796	1396951	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	8455	8610	GCA_000520055_1_1_1305	GCA_000520055_1_1_1305	-	5402276	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MDTIDLGSNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0015	shell	direct	high	155	0.994	GCA_000520055.1_01416
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1397155	1397562	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	8814	9221	GCA_000520055_1_1_1306	GCA_000520055_1_1_1306	-	5402276	.	PDB:2FJR_A	Repressor-protein-CI	MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQPAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPNNQPAILTEDQKELLQLFDALPDSEQKALLSEMRARVENFNKLFEELLKARKRSANK*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0016	cloud	direct	high	407	0.998	GCA_000520055.1_01417
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1397639	1397866	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	9298	9525	GCA_000520055_1_1_1307	GCA_000520055_1_1_1307	+	5402276	.	PRK09744	DNA-binding transcriptional regulator DicC; Provisional	MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQEASGGELQYDPKVYDEYRKAKRAGRLNNENHP*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0017	cloud	direct	high	227	0.996	GCA_000520055.1_01418
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1397850	1398401	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	9509	10060	GCA_000520055_1_1_1308	GCA_000520055_1_1_1308	+	5402276	.	PFAM:PF06254.10	CII-like-transcriptional-activator	MKITPEQVCEALDAWVCRPGMTQEQATILITEAFWALKERPNIDVQRVTFDDGAVDQRALGVNRVKIFERWKSIDTRDKREKFTALIPAIMEAIRISDFRLYREITDGKSITYMIAGLNKEYGDVVESGLLFADPAVVERETDELIEKAIAFKHAYRQQYQYYFADKQMSARGSYEYRCTTMG*	phrogs_hmm	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0018	cloud	direct	high	551	0.998	GCA_000520055.1_01419
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1398373	1399413	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	10032	11072	GCA_000520055_1_1_1309	GCA_000520055_1_1_1309	+	5402276	.	PDB:2RU8_A	Primosomal-protein-1	MSIDALRWAKKVKTGSSSSKSVLTWLADMCGADLCAYPSVSALAEVTELNKKTVQDSLRHLMEIGLIVDTGERKGRTKQIVVYRLIGVEESVAEPEYTQKRESLKVGKISAVNKNSTENGYVSAQNRPKNGTLNCMENNQRHPNFPSKTPKNGSRNPKEPKDLTPTHNARESAPTSEQEVLSLQAAPPVFLDGLSEPIGKFPMTESWYPSRDFRRRAALWGMALPETEFTPAELAAFRDYWAAEGKVFTQIQWEQKFARHVNHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGTHGGGLFEPLDPEERGRTIEALDCTDWRDD*	rep_hall_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0019	cloud	direct	high	1040	0.999	GCA_000520055.1_01420
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1399445	1399867	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	11104	11526	GCA_000520055_1_1_1310	GCA_000520055_1_1_1310	+	5402276	.	PFAM:PF06992.10	Replication-protein-P	MDRCRAGETWPPDLAEFVALISKSGANPFGLTVDAVMEEYRRWRNESWRYDGSDKYPWSQPVLYHICLEMRSKGIERQMTEGELKRLAERQLTKWAKHVSNGLSVPPVRRQLAAPKRPSGPTPIELLKQEYERRKAAGFV*	rep_hall_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0020	cloud	direct	high	422	0.998	GCA_000520055.1_01421
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1399897	1400319	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	11556	11978	GCA_000520055_1_1_1311	GCA_000520055_1_1_1311	+	5402276	.	pfam06163	Bacterial protein of unknown function (DUF977). This family consists of several hypothetical bacterial proteins from Escherichia coli and Salmonella typhi. The function of this family is unknown.	MARPYTQEEREKLKADIVAFVRMSGRATLQQLANETGVAMRTVRCLCGSLAGSGDIWLSGYGVFSSEQARKDWQNARKKLSRAKAKKPVVVDPDLIWSLPDGEIRRYDRRQNIICRECRKSEAMQRVLAFYQGNFHETVL*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0021	cloud	direct	high	422	0.998	GCA_000520055.1_01422
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1400377	1400733	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	12036	12392	GCA_000520055_1_1_1312	GCA_000520055_1_1_1312	+	5402276	.	.	hypothetical protein	MEIKPEDELSNIVLFPVKEDDPRNQVNFLYEPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRILRQEERERRRNIEKLIQIERNVKARIRRVTKSRTE*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0022	cloud	direct	high	356	0.997	GCA_000520055.1_01423
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1400782	1400994	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	12441	12653	GCA_000520055_1_1_1313	GCA_000520055_1_1_1313	+	5402276	.	.	hypothetical protein	MSNAQKVINAEKYNEWVKKFSEQIFKITGDENAAKNELEPWTPEGVDPNYCWWDVDPVDAANEAMSYHND*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0023	cloud	direct	high	212	0.995	GCA_000520055.1_01424
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1401030	1401863	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	12689	13522	GCA_000520055_1_1_1314	GCA_000520055_1_1_1314	+	5402276	.	.	hypothetical protein	MTELTKEKLIEEAKLKIAIAKCYPNSGMARVEGELFKIALASLEAEPIGAFHIVEQQVDGTSYYIKDGEWPIDTGIIEVYAASPMTVVLNDVSGPLALAYKELTPAIMRNHIAVFERYGITPNDSITTIHALRIALDGIERSDAMLHGRQPCHQITASMAKAIALKLGAELNNEEAEIFADGYNTAMLHAENFRENKNSSTNNFRITSETSTNSPAIPDEVLSAILKVARVRADFDASEGDRRGIGGCLDEAEQELIVTINKYASQIAVEAIQGAHQ*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0024	cloud	direct	high	833	0.999	GCA_000520055.1_01425
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1401973	1402077	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	13632	13736	GCA_000520055_1_1_1315	GCA_000520055_1_1_1315	+	5402276	.	.	hypothetical protein	MSDDISLVMEGALAVIAVVGVYCLVVFLMDRLGN*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0025	cloud	direct	high	104	0.99	GCA_000520055.1_01426
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1402321	1402476	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	13980	14135	GCA_000520055_1_1_1316	GCA_000520055_1_1_1316	+	5402276	.	pfam01848	Hok/gef family. 	MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTVYEPEE*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0026	persistent	direct	high	155	0.994	GCA_000520055.1_01428
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1403332	1404381	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	14991	16040	GCA_000520055_1_1_1317	GCA_000520055_1_1_1317	+	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVLVPELGLVVLKPGRESLPVFHRGRVLVEPEPKNMRALPSGAVPTVRQPLAEDKSLLPFFSDERVIRAAGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHSYGAGAMVLCWHCDNQLRDQTSESLEQLTQQNLTAWMIDVIRHVMNGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKIRSVYRESDIIPGEQTATSILKQRTKNIALPSHTHQQQNPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0027	shell	direct	high	1049	0.999	GCA_000520055.1_01430
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1404394	1404768	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	16053	16427	GCA_000520055_1_1_1318	GCA_000520055_1_1_1318	+	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MRIEFVLPYPPTVNTYWRRRGSTYFVSKVGERYRRAVALIVRQQRLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGMLMDDEQFDEINIVRGQPVSGGRLGVKIYPIMLEGLVKK*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0028	cloud	direct	high	374	0.997	GCA_000520055.1_01431
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1404765	1405586	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	16424	17245	GCA_000520055_1_1_1319	GCA_000520055_1_1_1319	+	5402276	.	pfam03589	Antitermination protein. 	MKLEDLPKYYSPKSPGLTDASASTSKDTLSITDVMAAQGMTQNWAEMGFSAFLGKMGISMNDRERATELLTEYALSRCDRVAALRKLPAEIKPAVMRIMASYAFEDYARSAASKKQCPCCHGKKFIESEVFTNKIQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGYERLPSTEAFNAICNVTDAISLDTWKKTVKRFYDTLVVQFDIEEAWAEQQLKKVTR*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0029	cloud	direct	high	821	0.999	GCA_000520055.1_01432
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1406040	1406186	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	17699	17845	GCA_000520055_1_1_1320	GCA_000520055_1_1_1320	+	5402276	.	cd07176	tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	MKHDTREAEDVLDVAVAIAEADGEIEPEERKVLEEIAGVLGLRLENHQ*	mmseqs_cdd	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0030	cloud	direct	high	146	0.993	GCA_000520055.1_01433
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1406183	1406350	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	17842	18009	GCA_000520055_1_1_1321	GCA_000520055_1_1_1321	+	5402276	.	pfam13064	Protein of unknown function (DUF3927). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are approximately 50 amino acids in length. There is a conserved SVL sequence motif. There is a single completely conserved residue D that may be functionally important.	MTVKLRLAVAALLLFLVVMVDFTSRIMSVLADGVLVCGIVVLLWPVIKRNSLHNA*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0031	cloud	direct	high	167	0.994	GCA_000520055.1_01434
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1406757	1408607	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	18416	20266	GCA_000520055_1_1_1322	GCA_000520055_1_1_1322	+	5402276	.	6YP6_A	NanS-p	MTFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAITAEGDVVVSGATEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLIARTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLVLEINAPAA*	hhsuite_tools	nonviral_gene	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0032	cloud	direct	high	1850	0.999	GCA_000520055.1_01437
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1409057	1409263	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	20716	20922	GCA_000520055_1_1_1323	GCA_000520055_1_1_1323	+	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIKEDKRKVARGE*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0033	persistent	direct	high	206	0.995	GCA_000520055.1_01438
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1409519	1409791	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	21178	21450	GCA_000520055_1_1_1324	GCA_000520055_1_1_1324	-	5402276	.	.	hypothetical protein	MTENVKSELLLLMADNNEATSSILADPYGKISHKTLDIITTTLTPLMLQRLKHNINAWVNEELSPPCLWDSRYACQQKMRIFNLLSPKLR*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0034	cloud	direct	high	272	0.996	GCA_000520055.1_01439
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1409951	1410484	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	21610	22143	GCA_000520055_1_1_1325	GCA_000520055_1_1_1325	+	5402276	.	CDD:COG3772	lysozyme	MNEKIKYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGAILVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0035	shell	direct	high	533	0.998	GCA_000520055.1_01440
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1410777	1410908	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	22436	22567	GCA_000520055_1_1_1326	GCA_000520055_1_1_1326	+	5402276	.	.	hypothetical protein	MSDKLIMLAKILCVIVGISFSLMLVALFLSMGWMMLSSSGLLG*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0036	cloud	direct	high	131	0.992	GCA_000520055.1_01441
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1410920	1411378	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	22579	23037	GCA_000520055_1_1_1327	GCA_000520055_1_1_1327	+	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MLSAFTVILLVVCGALSLGLNHYRDNAITYKAQRDKKASELDLANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCPGTVREATGTSGVGNDAAVELSPVAGRNVLGIRDGIISDQAALRMLQEYIRTQCIN*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0037	cloud	direct	high	458	0.998	GCA_000520055.1_01442
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1411402	1411626	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	23061	23285	GCA_000520055_1_1_1328	GCA_000520055_1_1_1328	+	5402276	.	.	hypothetical protein	MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQVNATNEELTVECTMNAAKCRMVSAALQPVC*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0038	cloud	direct	high	224	0.996	GCA_000520055.1_01443
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1411983	1412123	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	23642	23782	GCA_000520055_1_1_1329	GCA_000520055_1_1_1329	+	5402276	.	.	hypothetical protein	MDFMLTVSGVVILSIAYTADKYGCHLLSRIGAYCSLMLIFSSLFFE*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0039	cloud	direct	high	140	0.993	GCA_000520055.1_01444
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1412346	1412435	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	24005	24094	GCA_000520055_1_1_1330	GCA_000520055_1_1_1330	+	5402276	.	.	hypothetical protein	MFKGDIDLFNHVIGETDIADCGSAGPVFR*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0040	cloud	direct	high	90	1.0	GCA_000520055.1_01445
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1412480	1412845	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	24139	24504	GCA_000520055_1_1_1331	GCA_000520055_1_1_1331	+	5402276	.	COG1403	5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]. 	MAVLRTLPGRIKTLNTRRVNVLKGEQRRVSGSARVSLKRRIWLRDAGQCCLCGRVVDLCDSELEHRIALQFGGGNEETNLWTLCTECHRQKSAREAASGMPDPTLPEVSGGSGRADDIIGL*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0041	cloud	direct	high	365	0.997	GCA_000520055.1_01446
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1413134	1413697	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	24793	25356	GCA_000520055_1_1_1332	GCA_000520055_1_1_1332	+	5402276	.	CDD:COG3728	Small-Terminase	MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDETNPEMPPPVVISPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKGDAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0042	cloud	direct	high	563	0.998	GCA_000520055.1_01447
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1413694	1415355	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	25353	27014	GCA_000520055_1_1_1333	GCA_000520055_1_1_1333	+	5402276	.	PFAM:PF03354.14	Large-Terminase	MIPVWSTACPDWAERLKKGLSIIPDPIYPDEAAHALAIFKQLRIVDAPGSPTFGESCAPWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIMMTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRVTDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQCKAEDMLREAIGGLASRPEGFVVYTTTQSNEPPAGVFRQKLQYARDVRDGKIHDPHFLPVIFEHPPEMVESGANLLMENLAMVNPNLGYSVDEAFLYREYRKAREAGEETFRGFMSKHANVEIGLALRSDRWAGADFWEEQGRCISLDDILRRADVVTVGIDGGGLDDLLGMYVIGRDRETREWLGWGHAWAHETAVVRRKSEASRFQDLVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQILDSLAEAGIPDGIVVGISQGWKLGGAIKTTERKLAEGVLVHGDQPLMAWCVGNARVEPKGNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKEYAVFFI*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0043	cloud	direct	high	1661	0.999	GCA_000520055.1_01448
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1415419	1417356	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	27078	29015	GCA_000520055_1_1_1334	GCA_000520055_1_1_1334	+	5402276	.	PDB:8ECN_B	Major-Capsid-Protein	MTLKRACSLLTVKSFSEDERVITGIASTPSPDRDGDILEPEGAEFGSAIPFLWQHDHSRPVGQCTVRRVSEGLEITATLVKPVPDMPSQLAARLDEVWAAIKTGLVRGLSVGFRPHEYTFLDGGGLHFLRWELMEVSAVTVPANAECTIRTIKSYDRPFSAASGNRKPVVKIASSAGAAAQSTTVFHKEKTIMNIGEQIKSFENKRAALAASLEEVMTKAAEEGRTLDVEEEEHYDNTAAEIRQVDAHLKRLRELEAGKAATAQPVKQAGNGNVAAVASAPVIRVEQKLDKGIGFARFAKSLAAAKGVRSEALEVARRQYPDDSRLHHVLKSAVGAGTTTDPQWAGSLSEYQEYAQDFIDYLRPQTIIGRFGQGGIPALRQVPFNIRVHAQVSGGAAGWVGEGKAKPLTKFDFESITFSHAKVSAIAVLTEELIRFSSPAADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDVKGTASTGNPDADAEAAFGQFVAANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGSFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTGDSTTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGSASGG*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0044	cloud	direct	high	1937	0.999	GCA_000520055.1_01449
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1417401	1417622	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	29060	29281	GCA_000520055_1_1_1335	GCA_000520055_1_1_1335	+	5402276	.	.	hypothetical protein	MAKIRYLQGTHDARAGDIRDVAQPCAEVLVRLGKAEYITVRRPAGQKKKRDAEHGECGTFYGEPEKTRNQDVT*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0045	cloud	direct	high	221	0.995	GCA_000520055.1_01450
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1417568	1419985	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	29227	31644	GCA_000520055_1_1_1336	GCA_000520055_1_1_1336	+	5402276	.	PDB:3KDR_A	Portal-Protein	MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFSGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDAHGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASAGKTVSSQLPDGASDGNKAISETEHDAVKAMFRGDTEKMTERELSIIRALGEEFSTVLADLQRTFEGKMASQAQAFEEKLTSLSAVLQKHVTVDEVRPVLQAMVDDAVGAIPVPRDGRDYDPDVLQQAVNDAVANIPQPADGKSLTPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVNDAVANIPQPADGKSLTPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVLDAVSALPAPQDGRDATALEILPAIDDQKSFPRGTYATHQGGLWRAYEKTHGMRGWECLVDGVADIDVSMTDERLFSVVIRQSSGQCTEKTFSLPVMLYRGVFRAGETYHPGDTVTWGGSLWHCNSMTEDKPGEAHSSAWTLAAKRGRDAGG*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0046	cloud	direct	high	2417	1.0	GCA_000520055.1_01451
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1419988	1420314	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	31647	31973	GCA_000520055_1_1_1337	GCA_000520055_1_1_1337	+	5402276	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELLQGELPFSVSVLIYDLRCPTVL*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0047	cloud	direct	high	326	0.997	GCA_000520055.1_01452
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1420324	1420674	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	31983	32333	GCA_000520055_1_1_1338	GCA_000520055_1_1_1338	+	5402276	.	CDD:COG5614	Head-Tail-Connector-protein	MAISAGRLTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0048	cloud	direct	high	350	0.997	GCA_000520055.1_01453
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1420671	1421117	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	32330	32776	GCA_000520055_1_1_1339	GCA_000520055_1_1_1339	+	5402276	.	PFAM:PF04883.11	tail-component	MIETLLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRAPVRRGKLRRNVVVLSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0049	cloud	direct	high	446	0.998	GCA_000520055.1_01454
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1421114	1421257	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	32773	32916	GCA_000520055_1_1_1340	GCA_000520055_1_1_1340	+	5402276	.	.	hypothetical protein	MTEADLYPHLAHLAGGQVYPYVVPLLDGRPSVALPWVVFSLISLARL*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0050	cloud	direct	high	143	0.993	GCA_000520055.1_01455
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1421358	1422173	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	33017	33832	GCA_000520055_1_1_1341	GCA_000520055_1_1_1341	+	5402276	.	PFAM:PF13550.5	tail-protein	MWAVKLQQMKDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLFAVSITSSGNPPTFSLTPEGKLTARNADISGAITANTGTLNNVTINENCVIRGKLSANQIEGDLVKTVGKAFPRNNSYASGTVTVTVYDDQGFDRQIIIPPVLFRGTKHQNFNSPNQQSYWYSTCKLQVLKNGVEIFHEPATDVSRVFSSVIDMPAGRGHVTLTFNVSSAGANNWTPTTYISDLLVVVMKKSTAGISIS*	common_virus_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0051	cloud	direct	high	815	0.999	GCA_000520055.1_01456
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1422240	1422839	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	33899	34498	GCA_000520055_1_1_1342	GCA_000520055_1_1_1342	+	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAEYLHASTNVPGSDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNMSLAWGAGVQFNPIESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0052	shell	direct	high	599	0.998	GCA_000520055.1_01457
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1422904	1424217	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	34563	35876	GCA_000520055_1_1_1343	GCA_000520055_1_1_1343	+	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEVARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDATWVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0053	cloud	direct	high	1313	0.999	GCA_000520055.1_01458
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1424219	1424488	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	35878	36147	GCA_000520055_1_1_1344	GCA_000520055_1_1_1344	+	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKIMQRLCGYGKHDDREDGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGRWENIGGMK*	mmseqs_cdd	common_virus	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0054	cloud	direct	high	269	0.996	GCA_000520055.1_01459
GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote	cenote	CDS	1424595	1424684	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C71	36254	36343	GCA_000520055_1_1_1345	GCA_000520055_1_1_1345	+	5402276	.	.	hypothetical protein	MPINLTSYLWVQGQKVVPAVVFSNFTLVD*	.	hypothetical_protein	C71	36343	1388342	1424685	GCA_000520055.1|CP006262.1@region_1388343_1424685@tool_cenote_CDS_0055	cloud	direct	moderate	89	0.989	GCA_000520055.1_01460
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1438955	1440184	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	1	1230	GCA_000520055_1_1_1355	GCA_000520055_1_1_1355	+	5402276	.	PDB:1Z19_B	Integrase	MSRALNKLSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKLGNYPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEALKPVTVGDALTYWLESYAKENRVDYAALKKRLNNHVIQHIGAMPLDKCELRHWLACFDQVAKRTPVTAGFLLQTCKQALKFCRRRRYAISNVLDDMSVADVGKKPDISERVLSTKELGELLQALDKKIFSPYYIALIRLLIVFGCRTVELRLSEISEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFITQLVEQNRHTGLLLGEVKQEASVSQYGRLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNALDMWTERLGILAGTHENVTTLPVARRK*	common_virus_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0001	cloud	direct	high	1229	0.999	GCA_000520055.1_01470
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1440794	1441738	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	1840	2784	GCA_000520055_1_1_1356	GCA_000520055_1_1_1356	+	5402276	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MKIEYTPERGRGFVRPGETGKPQNWGFSGIKKAAPKWSRLSEQITRCALCVYDPKHKHGDDSRYQAGGQCYQSGSVRCHTCNGRVSLYSLRNCSRAKAHGANLSDSCSIFLRRLFRAGDNVLVNSLSVIVLSCIAMRRNTSHHGADSFYPLGSMPRCCNSLRRTRLIQVAKDVSPSALAASSSCALKSSGNRIWYGGERFSNGVDMVITLYYYTYMVITIVLAITQKSTPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARNRCPSGCVAVFAARIRQEVRHD*	mmseqs_cdd	nonviral_gene	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0002	cloud	direct	high	944	0.999	GCA_000520055.1_01471
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1441731	1441943	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	2777	2989	GCA_000520055_1_1_1357	GCA_000520055_1_1_1357	+	5402276	.	.	hypothetical protein	MINLSLTDLNRIQFREKFTGQLLVNVDKGRVVCNYHLPDEAIVATRESLQEITKRAGMINTNIQGMLYAQ*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0003	cloud	direct	high	212	0.995	GCA_000520055.1_01472
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1441933	1442397	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	2979	3443	GCA_000520055_1_1_1358	GCA_000520055_1_1_1358	+	5402276	.	.	hypothetical protein	MHNKTTPDAAAEAIKTLMHALIDISVIADRAHKHATSETEYAGAFVPHSLAVMQFSADTALNEAKAILIADCENGGVMRDDRFNSLKQEFSGVPDDAADALSSMPELIRAAFFLLSTREYKSTGLDVLNIAADYAEYVAEARYRRKFPEDVSHA*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0004	cloud	direct	high	464	0.998	GCA_000520055.1_01473
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1442390	1442623	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	3436	3669	GCA_000520055_1_1_1359	GCA_000520055_1_1_1359	+	5402276	.	.	hypothetical protein	MRDIYHQTIDRAFLALSHSENMMEILRIWLETLGDNERDKQKSRIATALITLLEPVIMELQEIDLLHDRYKEQHTGE*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0005	cloud	direct	high	233	0.996	GCA_000520055.1_01474
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1442629	1442928	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	3675	3974	GCA_000520055_1_1_1360	GCA_000520055_1_1_1360	+	5402276	.	PF13973.6	Domain of unknown function (DUF4222)	MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVEERRVTYRREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMVNGFRGKK*	hhsuite_tools	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0006	cloud	direct	high	299	0.997	GCA_000520055.1_01475
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1442925	1444325	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	3971	5371	GCA_000520055_1_1_1361	GCA_000520055_1_1_1361	+	5402276	.	PDB:1NLF_A	replicative-DNA-helicase	MKSAPNLKKQPYDKMTEVIIFAGSDAWAHAKQWQEQDGRLAGDNVPPVVLADDQLDELADLRIIDEGRYCVRLYKAGHIRPSNINAIAHKLAAAGVTDANYYPEGMHSHMRENWREYLERVRGKEPAEEKNHQRKTTLPMSVGSTGYDTQLDYVVKGIIPAVSLCSIYGASGSYKSFLAGSWACHVATGRQWGGRRVAHGAVLYVVGEGGIGVPRRVKAWEVVHDEQVKNLYLVNRPIFPAAPLDVDEMVIAARQVERETGKPVRMIILDTLARCFGGNDENDSRDMGAFIRGCDELKRRTGATVLVVHHSGKDETKGARGSSAFRASLDAEYRIRREDAGSEALVISCTKMKDAEELKEAAYDLRVVELFTDADGELITSLVVVDDPRPPVELERIEEAGNKTENHTALWGCIRSRTQNGDKCTIPLLRDDMKKLGYEMKNFRRWLYKLEKDGVIRIDGDDVAPL*	rep_hall_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0007	cloud	direct	high	1400	0.999	GCA_000520055.1_01476
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1444526	1444777	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	5572	5823	GCA_000520055_1_1_1362	GCA_000520055_1_1_1362	+	5402276	.	.	hypothetical protein	MTQKRRDRTEPKYKALDMTEHTLKVAIRTIDRHTREGYAKEHPDLISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVEL*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0008	cloud	direct	high	251	0.996	GCA_000520055.1_01477
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1444774	1445184	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	5820	6230	GCA_000520055_1_1_1363	GCA_000520055_1_1_1363	+	5402276	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAVSLPCSQAQDGQATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGWQVIADSVISARAARPGGNRRKTTGTQGNQPPAGGDDPYGDDISF*	common_virus_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0009	cloud	direct	high	410	0.998	GCA_000520055.1_01478
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1445195	1445467	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	6241	6513	GCA_000520055_1_1_1364	GCA_000520055_1_1_1364	+	5402276	.	pfam06069	PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	MVHDRIAEELEAKGFYRRAAARWGEVMQLVETDKERHHITMRRLECSRKAQRAPEPPDNFGDLKKAVDRTYAEMGIDGAGDEIWRNYQDS*	mmseqs_cdd	nonviral_gene	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0010	cloud	direct	high	272	0.996	GCA_000520055.1_01479
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1445594	1445818	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	6640	6864	GCA_000520055_1_1_1365	GCA_000520055_1_1_1365	+	5402276	.	.	hypothetical protein	MPMKFDEILKQRDKYHADNMETMSINDYRAFLETGALIEKDQHGFVRCALSGEMLAVNPEQIDALIEFLKEIRD*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0011	cloud	direct	high	224	0.996	GCA_000520055.1_01480
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1446070	1446276	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	7116	7322	GCA_000520055_1_1_1366	GCA_000520055_1_1_1366	+	5402276	.	.	hypothetical protein	MAEEKKGGVSVYISPDIVKALKERHQQNVKAGIAAGLDPLAMVEPSTGWQVRAYLRAALGMNQTHGGE*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0012	cloud	direct	high	206	0.995	GCA_000520055.1_01481
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1446276	1447331	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	7322	8377	GCA_000520055_1_1_1367	GCA_000520055_1_1_1367	+	5402276	.	PDB:3BQW_A	Capsid-protein	MAGKATALNTNQLFAYLNRGDIAEFKFSPLFTTLFFPNVATFNTQNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNLIEGEGIERYEIDWKIPESNIIEQADGKKWSELDKETHDPIYDIELYADQGNCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAELACKNLGEVVSFKGYLGDIALVVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMFYPKNWIEDGDPAIEYVQTHSAPQPVPADIRKFVTVKIG*	hallmark_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0013	cloud	direct	high	1055	0.999	GCA_000520055.1_01482
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1447344	1447679	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	8390	8725	GCA_000520055_1_1_1368	GCA_000520055_1_1_1368	+	5402276	.	PDB:1TCZ_D	Head-decoration-protein	MDTPYIELFAGSQQVSTTLVHFAADAGVIQEFTPLMLAENGEFKPWDGQESGKAVYLTSYPVDTSTQKSAQCYKTGIFNIAAVNWPESADTDAKKCAAFAGSGVSVQPLAR*	hallmark_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0014	cloud	direct	high	335	0.997	GCA_000520055.1_01483
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1447692	1448105	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	8738	9151	GCA_000520055_1_1_1369	GCA_000520055_1_1_1369	+	5402276	.	PFAM:PF00378.19	head-maturation-protease	MATNESIMTLPLASKFKAEARAMADRGLSTYEAVYQLNSLEEKDKPRADAIMALHESDDYQPLLRAMANVPCIDVDTAKNILNMTIEQERPKVAPELTAAFENFMDMHSPQAVSAGMAYDGRNPGDDGDIDRILKTI*	phrogs_hmm	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0015	cloud	direct	high	413	0.998	GCA_000520055.1_01484
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1448311	1448853	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	9357	9899	GCA_000520055_1_1_1370	GCA_000520055_1_1_1370	+	5402276	.	PFAM:PF07471.11	small-terminase	MKSHLMNKKNMAKSCRVSATAFDKWGVTPVERKGREAFYDVASVIENRVNNAISQLINDKGEIDDDELLRVRIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKLASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKETTGNVPEKLLQKKGE*	hallmark_hmm	common_virus	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0016	cloud	direct	high	542	0.998	GCA_000520055.1_01485
GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote	cenote	CDS	1449110	1449391	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C73	10156	10437	GCA_000520055_1_1_1371	GCA_000520055_1_1_1371	+	5402276	.	.	hypothetical protein	MTEAELLGLIRRVAGISQQHDEQATQPDSVTAENYVRVVAEVMRRDGIELNGVDMRNIRNRVLEMLAYNRRVELYREKEKITYHWKKPERLRR*	.	hypothetical_protein	C73	10437	1438955	1449392	GCA_000520055.1|CP006262.1@region_1438956_1449392@tool_cenote_CDS_0017	cloud	direct	high	281	0.996	GCA_000520055.1_01486
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1569438	1570076	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	1	639	GCA_000520055_1_1_1489	GCA_000520055_1_1_1489	+	5402276	.	PRK10959	outer membrane protein W; Provisional	MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0001	persistent	direct	high	638	0.998	GCA_000520055.1_01612
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1570122	1571252	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	685	1815	GCA_000520055_1_1_1490	GCA_000520055_1_1_1490	-	5402276	.	PDB:1Z19_B	Integrase	MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSIDQKLAETIAAEANSRLARQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENGEIKLNTLKQKAAPLRVFDERFGTRPLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLIDVFREAQQTGDVPPGFNPAESAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGMLLALMTGQRLSDICKMQFSDIRDGYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSCRDCVLSPWLLHHHHAKGTAKRGGMVKPATLTVAFKKARDSVDYNWRANGTPPSFHEQRSLSERLFREQGVDTKILLGHSNQKMTDIYNDARGKEWKKLVI*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0002	cloud	direct	high	1130	0.999	GCA_000520055.1_01613
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1571543	1574014	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	2106	4577	GCA_000520055_1_1_1491	GCA_000520055_1_1_1491	-	5402276	.	PRK09709	exodeoxyribonuclease VIII. 	MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDECRARAKFHWQFLEHYPAAQDCAYKFLVCEDKPGIPRPALDSWDAEYMQENRWDEESASFIPVEPESDPMNVNFDKLSLEVQNAVLVKFGTCENITVDMAIDAQELLQEDVATFDGHIVEALMKTPEINAMYPERKLFAIGWVKHKCNPGAKWPEIQAELRNWKKRQDAERKETGKYTSVVDLASARVNQQNTENSAGKINPVTAAICREYKQTWKTLDEELAYALWPGDVDAGNIDGSIHRWAKNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEYLTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPGNEKTECKVEVEPSVEREGPFYFLFTDKDGEKYGRANKLSGLEKALALGATEITKEEYFARKNGTYSGSQQNTGASDTTAQPEPVKVTADEVNKIMQAANISQPDADKLLAASRGEFVAGISDPNDPKWVKGIETRDSVNQNQQESEQNDQKAEQNSPNTQQNEPETKQPEPVAQQEPEKVCTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEEMEGAEHPHKENTDGNQHHDSDNETGETADHSIKVNGHQEITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPNQADF*	mmseqs_cdd	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0003	shell	direct	high	2471	1.0	GCA_000520055.1_01614
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1574110	1574298	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	4673	4861	GCA_000520055_1_1_1492	GCA_000520055_1_1_1492	-	5402276	.	pfam07358	Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	MTSAFALVMTVFLITGEPQNVITGIYDSKSSCIQVRDEQKIPGECLPLKKVSLNLNNEIPAG*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0004	cloud	direct	high	188	0.995	GCA_000520055.1_01615
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1574295	1574483	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	4858	5046	GCA_000520055_1_1_1493	GCA_000520055_1_1_1493	-	5402276	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	METLLPNVNTSEGCFDIGVLLSNREFTEDAIKMRKYEPYLLNDNSILSRIALLELGIIGEQQ*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0005	cloud	direct	high	188	0.995	GCA_000520055.1_01616
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1575050	1575283	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	5613	5846	GCA_000520055_1_1_1494	GCA_000520055_1_1_1494	+	5402276	.	.	hypothetical protein	MLKSTLIAKCLYQNRMVSSISIGESAVKSIFEEYFPGHDFNKWNTKLPPAVSTRILKATERASTIRVNYFIKDLWDL*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0006	cloud	direct	high	233	0.996	GCA_000520055.1_01618
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1575261	1575668	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	5824	6231	GCA_000520055_1_1_1495	GCA_000520055_1_1_1495	-	5402276	.	.	hypothetical protein	MEFKDLPTPLQEMASNIVRSQLATLDLSTAEKETIDNMVRNVRNAFSGLYGSDNQKQESDVNKRVISVCVNGHVLSSIKTETATVFDCLCIVQSLVDALFRSVNLENDANLRGRIIAHPYAHTLGSVDIKDPTNL*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0007	cloud	direct	high	407	0.998	GCA_000520055.1_01619
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1575691	1575909	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	6254	6472	GCA_000520055_1_1_1496	GCA_000520055_1_1_1496	-	5402276	.	.	hypothetical protein	MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0008	shell	direct	high	218	0.995	GCA_000520055.1_01620
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1575982	1576338	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	6545	6901	GCA_000520055_1_1_1497	GCA_000520055_1_1_1497	-	5402276	.	.	hypothetical protein	MGEVKHQNGRRPGISKETAMALYIDISAIAGQVRVIRAVTKRYAPLLQKVSGECTEDIVNDFVIELRGLIFSYKVTTIFADGSRETVRALRLKGCVKDLATTFWARKLDCIHNQFPLE*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0009	cloud	direct	high	356	0.997	GCA_000520055.1_01621
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1576546	1576953	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	7109	7516	GCA_000520055_1_1_1498	GCA_000520055_1_1_1498	-	5402276	.	PDB:2FJR_A	Repressor-protein-CI	MKNETFGARLLYRRKKLKLSQAALGKLVKVAHVTISQWERDETQPAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPVNLTEDQKELLQLFDALPESEQKALLSEMRARVENFNKLFEELLKARKRSANK*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0010	cloud	direct	high	407	0.998	GCA_000520055.1_01622
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1577030	1577257	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	7593	7820	GCA_000520055_1_1_1499	GCA_000520055_1_1_1499	+	5402276	.	PRK09744	DNA-binding transcriptional regulator DicC; Provisional	MLKIDAIAFFGSKTKLANVAGVRLASVAAWGELVPEGRAMRLQEASGGELQYDPKVYDEYRKAKRAGRLNNENHH*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0011	cloud	direct	high	227	0.996	GCA_000520055.1_01623
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1577241	1577792	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	7804	8355	GCA_000520055_1_1_1500	GCA_000520055_1_1_1500	+	5402276	.	PFAM:PF06254.10	CII-like-transcriptional-activator	MKITTEQVCEALDTWVCRPGMTQEQATILITEAFWALKERPNIDVQRVTFNDGEVDQRALGVNRVKIFERWKAIDTRDKRDKFTALIPAIMEAIRISDFRLYCEITDGKSITYMIAGLNKEYGDVVESGLLFADPVVVERETDELIEKAIAFKHAYRQQYQYYFADKQMSARGSYEYRCTTMG*	phrogs_hmm	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0012	cloud	direct	high	551	0.998	GCA_000520055.1_01624
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1577764	1578804	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	8327	9367	GCA_000520055_1_1_1501	GCA_000520055_1_1_1501	+	5402276	.	PDB:2RU8_A	Primosomal-protein-1	MSIDALRWAKKVKTGSSSSKSVLTWLADMCGADLCAYPSVSALAEVTELNKKTVQDSLRHLMEIGLIVDTGERKGRTKQIVVYRLIGVEESVAEPEYTQKRESLKVGKIGAVNKNSTENGYVSAQNRPKNRTLSCMENNQRHPNFPSKTPKNGSRNPKEPKDLNPTHNARESAPTSEQEVLSLQAAPPVFLYGLSEPIGKFPMSDSWYPSRDFRRRAALWGMALPETEFTPAELAAFRDYWAAEGKVFTQIQWEQKFARHVNHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGTHGGGLFEPLDPEERGRTIEALDCTDWRDD*	rep_hall_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0013	cloud	direct	high	1040	0.999	GCA_000520055.1_01625
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1578836	1579258	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	9399	9821	GCA_000520055_1_1_1502	GCA_000520055_1_1_1502	+	5402276	.	PFAM:PF06992.10	Replication-protein-P	MDRCRAGETWPPDLAEFVALISKSGANPFGLTVDAVMEEYRRWRNESWRYDGSDKYPWSQPVLYHICLEMRSKGIERQMTEGELKRLAERQLTKWAKHVSNGLSVPPVRRQLAAPKRPSGPTPIELLKQEYERRKAAGFV*	rep_hall_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0014	cloud	direct	high	422	0.998	GCA_000520055.1_01626
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1579292	1580026	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	9855	10589	GCA_000520055_1_1_1503	GCA_000520055_1_1_1503	+	5402276	.	PFAM:PF03965.15	transcriptional-regulator	METVFDALKAMGKATSVELAARLDISREEVLNELWELKKAGFVDKSVYTWRVADNNVQQEQPAPEETTTATEAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQNGKIRYCIPGDNLPAEPKVESVAETDGKAFPQPAGVALPVQKDATQEDIKTETVADIVQSLPSFTATREDDLILPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDMVAGICRKSGQ*	phrogs_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0015	cloud	direct	high	734	0.999	GCA_000520055.1_01627
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1580023	1580187	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	10586	10750	GCA_000520055_1_1_1504	GCA_000520055_1_1_1504	+	5402276	.	.	hypothetical protein	MSGWCRPEIMILTMKVKCIGSLIGRSEAAVRMKAQVKGISLILRGDFHQSTKYP*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0016	cloud	direct	high	164	0.994	GCA_000520055.1_01628
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1580885	1581643	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	11448	12206	GCA_000520055_1_1_1505	GCA_000520055_1_1_1505	+	5402276	.	COG4588	Accessory colonization factor AcfC, contains ABC-type periplasmic domain  [Cell wall/membrane/envelope biogenesis]. 	MRNIMAGFLIFLSSAAYADINLYGPGGPHTALLDAAKLYAEKTGIIVNVHYGPQNKWNEDAKKNADILFGASEQSALAIIRDHKDSFSEKDIQPLYLRKSILLVKKGNPKNIRSIDDLTRPGIGVIVNDGGGTSNTSGTGVWEDIAGRKGNIETVAAIRKNIILYAPNSGTARKALENQPGADVWITWADWAASNPEIGDVVEIAPDYVIWRDMNITVRQDANDETRRFAEWLQTDEAAPAFKKYGWTRKGT*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0017	cloud	direct	high	758	0.999	GCA_000520055.1_01629
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1581979	1582134	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	12542	12697	GCA_000520055_1_1_1506	GCA_000520055_1_1_1506	+	5402276	.	pfam01848	Hok/gef family. 	MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0018	shell	direct	high	156	1.0	GCA_000520055.1_01631
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1582355	1582612	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	12918	13175	GCA_000520055_1_1_1507	GCA_000520055_1_1_1507	+	5402276	.	.	hypothetical protein	MRIEELREIFSEDGLYTVRVEKGAIVSHCRIKCLQSQQRKSGAALIHFVDGLVTDGFILRANEFVTSLPSLKEAGIKAGFSAFED*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0019	cloud	direct	high	257	0.996	GCA_000520055.1_01632
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1582682	1582960	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	13245	13523	GCA_000520055_1_1_1508	GCA_000520055_1_1_1508	+	5402276	.	.	hypothetical protein	MAQNSRLHNSDNSAVFASRHGRRSHAFKSDWFRHAPCTEEQAEWLIQNYRRRGYEFRKALSLDYRHWIIYVRLPYSERPPRPSRTFQQRIWR*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0020	cloud	direct	high	278	0.996	GCA_000520055.1_01633
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1582962	1584020	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	13525	14583	GCA_000520055_1_1_1509	GCA_000520055_1_1_1509	+	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVPVPELGLVVLKPGRESMQVFHNPRVLVEPEPKSMRGLPSGIVPAVRQPLAEDKSLLPFFSNERVIRAVGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATIILKQRTKNIALPPHTHQQQNPPQEKTVVSIAVDPESPAQYLQRQKPQREEMPVYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTKADDLFVIPLCRKCHNELHAGVKDFEEKHGSQLLLLIRFLMHARNSGVLKWKA*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0021	shell	direct	high	1058	0.999	GCA_000520055.1_01634
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1584021	1584386	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	14584	14949	GCA_000520055_1_1_1510	GCA_000520055_1_1_1510	+	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTERIEFVLPYPPTVNTYWRRHGNTYFISEAGKRYRRDVALIVRQQRLKLNLSGRLVIKIIAEPPDKRRRDLDNILKAPLDVLTHAGLLIDDEQFDEINIVRGQLVPGGRLGIKITELECA*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0022	cloud	direct	high	365	0.997	GCA_000520055.1_01635
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1584383	1585072	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	14946	15635	GCA_000520055_1_1_1511	GCA_000520055_1_1_1511	+	5402276	.	pfam06323	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	MNNHYLQFVREQLIIATADLSGATKGQLEAWQENAMFDTGRYRRKKIRYRDEVTGKMITRDNPPIPGKQSLAKVTSIPLVSPVEFSTSSWRRAVLSLEEHHKAWLLWCYSGSICWEYQIAITQWAWNEFNTQSGTRKIAGKTQERLKKLIWLAAQAVKAELFGGEGYEYQELALLAGVTTKNWSKTFTRHWVAMKHIFHRLDSEALLFVMRTRSKQKAAFSKQSVAKVD*	mmseqs_cdd	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0023	cloud	direct	high	689	0.999	GCA_000520055.1_01636
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1585622	1586818	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	16185	17381	GCA_000520055_1_1_1512	GCA_000520055_1_1_1512	-	5402276	.	PFAM:PF01548.16	Transposase	MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPALERVLGPRLDHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTFYTPQAS*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0024	cloud	direct	high	1196	0.999	GCA_000520055.1_01640
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1587324	1587887	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	17887	18450	GCA_000520055_1_1_1513	GCA_000520055_1_1_1513	+	5402276	.	CDD:COG3728	Small-Terminase	MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDETNPEMPPPAVMSPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKGDAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0025	cloud	direct	high	563	0.998	GCA_000520055.1_01641
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1587884	1589545	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	18447	20108	GCA_000520055_1_1_1514	GCA_000520055_1_1_1514	+	5402276	.	PFAM:PF03354.14	Large-Terminase	MIPVWSTACPDWAERLKKGLSIIPDPIYPDEAAHALAIFKQLRIVDAPGSPTFGESCAPWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIMMTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRVTDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQCKAEDMLREAIGGLASRPEGFVVYTTTQSNEPPAGVFRQKLQYARDVRDGKIHDPHFLPVIFEHPPEMVESGAHLLMENLAMVNPNLGYSVDEAFLYREYRKAREAGEETFRGFMSKHANVEIGLALRSDRWAGADFWEEQGRCISLDDILRRADVVTVGIDGGGLDDLLGMYVTGRDRETREWLGWGHAWVHETAVVRRKSEASRFQDFVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQILDSLAEAGIPDESVVGISQGWKLGGAIKTTERKLAEGVLVHGDQPLMAWCVGNARVEPKGNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKAYEVFFI*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0026	cloud	direct	high	1661	0.999	GCA_000520055.1_01642
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1589609	1591546	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	20172	22109	GCA_000520055_1_1_1515	GCA_000520055_1_1_1515	+	5402276	.	PDB:8ECN_B	Major-Capsid-Protein	MTLKRACSLLTVKSFSEDERVITGIASTPSPDRDGDILEPEGAEFGSTIPFLWQHDHSRPVGQCTVRRVSEGLEITATLVKPVPDMPSQLAARLDEVWAAIKTGLVRGLSVGFRPHEYTYLDGGGLHFLRWELMEVSAVTVPANAECTIRTIKSYDRPFSAASGNRKPVVKIASSAGAAAQSTTVFHKEKTIMNIGEQIKSFENKRAALAASLEEIMNKAAEEGRTLDVEEEEHYDNTAAEIRQVDAHLKRLRELEAGKAATAQPVKQAGNGNVATVASAPVIRVEQKLDKGIGFARFAKSLAAAKGVRSEALEVARRQYPDDSRLHHVLKSAVGAGTTTDPQWAGSLSEYQEYAQDFIDYLRPQTIIGRFGQGGIPALRQVPFNIRVHAQVSGGAAGWVGEGKAKPLTKFDFESITFSHAKVSAIAVLTEELIRFSSPAADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDVKGTASTGNPDADAEAAFGQFVAANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGSFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTGDSTTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGSASGG*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0027	cloud	direct	high	1937	0.999	GCA_000520055.1_01643
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1591591	1591812	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	22154	22375	GCA_000520055_1_1_1516	GCA_000520055_1_1_1516	+	5402276	.	.	hypothetical protein	MAKIRYLQGTHDARAGDIRDVAQPCAEVLVRLGKAEYITVRRPAGQKKKRDAEHGECGTFCGEPEKTRNQDVT*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0028	cloud	direct	high	221	0.995	GCA_000520055.1_01644
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1591758	1593122	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	22321	23685	GCA_000520055_1_1_1517	GCA_000520055_1_1_1517	+	5402276	.	PDB:3KDR_A	Portal-Protein	MWNLLRRTRKNQKSGRDVREVGWRSLFQAVAEPFAGAWQQGVKADPESVLSFHAVFSCISLISQDIAKMRLRLMQTDTQGIRREKRQGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNSRGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLVGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGESVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASAGKTVSAQLPDGASDGNKAISETEHDAVKAMFRGILRK*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0029	cloud	direct	high	1364	0.999	GCA_000520055.1_01645
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1593119	1594504	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	23682	25067	GCA_000520055_1_1_1518	GCA_000520055_1_1_1518	+	5402276	.	PDB:7SZ6_i	Portal-Protein	MTERELSIIRALGEEFSTVLADLQRTFEGKMASQAQAFEEKLTSLSAVLQKHVTVDEVRPVLQAMVDDAVGAIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQQAVNDAVANIPQPADGKSLTPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVNDAVANIPQPADGKSLTPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVLDAVRALPAPQDGRDATALEIIPAIDDQKSFPRGTYATHQGGLWRAYEKTHGMRGWECLVDGVADIDVSMTGERSFTVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTVTWGGSLWHCNSMTGDKPGEAHSSGWTLAAKRGRDAGGGK*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0030	cloud	direct	high	1385	0.999	GCA_000520055.1_01646
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1594501	1594827	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	25064	25390	GCA_000520055_1_1_1519	GCA_000520055_1_1_1519	+	5402276	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELIQGELPFSVSVLIYDLRCPTVL*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0031	cloud	direct	high	326	0.997	GCA_000520055.1_01647
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1594838	1595188	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	25401	25751	GCA_000520055_1_1_1520	GCA_000520055_1_1_1520	+	5402276	.	CDD:COG5614	Head-Tail-Connector-protein	MAISAGRLTQMISVLKPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0032	cloud	direct	high	350	0.997	GCA_000520055.1_01648
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1595185	1595631	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	25748	26194	GCA_000520055_1_1_1521	GCA_000520055_1_1_1521	+	5402276	.	PFAM:PF04883.11	tail-component	MIETLLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRAPVRRGKLRRNVVVLSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0033	cloud	direct	high	446	0.998	GCA_000520055.1_01649
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1595628	1595972	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	26191	26535	GCA_000520055_1_1_1522	GCA_000520055_1_1_1522	+	5402276	.	PFAM:PF05657.10	tail-component	MTEADLYPYLAHLAGGQVYPYVVPLLDGRPSVALPWVVFSLISSVSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENRCYRATLEFQVTV*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0034	cloud	direct	high	344	0.997	GCA_000520055.1_01650
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1596040	1596756	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	26603	27319	GCA_000520055_1_1_1523	GCA_000520055_1_1_1523	+	5402276	.	PFAM:PF16463.4	Tail-tube-protein	MSALYERSLLTQVMISSAPATAETMDKAEYLRLDCAIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNPEKTLTVNTGALLTMSVSVNGGTPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCVVTDSAEKAQSVTSVECTVTVSAAAG*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0035	cloud	direct	high	716	0.999	GCA_000520055.1_01651
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1596771	1597145	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	27334	27708	GCA_000520055_1_1_1524	GCA_000520055_1_1_1524	+	5402276	.	pfam06222	Phage tail assembly chaperone. 	MKKDLKTLALARLSGFRHKTVKVPEWRNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK*	mmseqs_cdd	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0036	cloud	direct	high	374	0.997	GCA_000520055.1_01652
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1597241	1597450	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	27804	28013	GCA_000520055_1_1_1525	GCA_000520055_1_1_1525	+	5402276	.	PFAM:PF06223.11	tail-protein	MWMEFDRVSPLGDERGDIRNAQIVKAVFGAQGMNVALKDAMLCWGEDEDKPEVDPFAALEDALSLAAMS*	phrogs_hmm	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0037	cloud	direct	high	209	0.995	GCA_000520055.1_01653
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1597502	1600744	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	28065	31307	GCA_000520055_1_1_1526	GCA_000520055_1_1_1526	+	5402276	.	PFAM:PF06120.10	Tail-length-tape-measure-protein	MATLRELIIKISANSQSFQSEIQRASRMGSEYYRTLQNGGRQAAAAAREQRRALAELHSQLTEIRASAVGMTGAFAGAFATGHLISLADEWSSVNARLKQASQSSDEFASSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVTEAISTGLKISGASTAEAGSVITQFSQALAQGVLRGEEFNSVNESGDRIVRALAAGMGVARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSSSITKVENAFMAWVGGANEASGVTKTLSGMLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAMSATAGLVTAARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNRNIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQARESARQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQYVLANPGWTTGDGFMINHLTSVKTVTEGLSQATEQLAVEQSRLAQMQEKAQSIQDVLAGLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRLPQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDPYQEARQRYISNALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALVGQNTELAKLKYQTAQGELKTLTEMQKQELLRNAALIDQQKIREQLRSREETLKNENAAARASNDAELLGYGQGERARERMRELQQIRDSFRQKDADLQSQYQTGDISEDFYRQALAQNAQYLSERLKEQEAFYAESDAQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNKVEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFLGSIGDWLGGAVANAKGGVYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMNGSAGLVYSPVYHIAIQNDGANGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0038	cloud	direct	high	3242	1.0	GCA_000520055.1_01654
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1600737	1601078	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	31300	31641	GCA_000520055_1_1_1527	GCA_000520055_1_1_1527	+	5402276	.	PFAM:PF05939.12	minor-tail-protein	MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNPQLKTFQAVFRVTDESTRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYSDFSCTIEQVVN*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0039	cloud	direct	high	341	0.997	GCA_000520055.1_01655
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1601078	1601776	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	31641	32339	GCA_000520055_1_1_1528	GCA_000520055_1_1_1528	+	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQNIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELRDRWVVEQMSELTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGDECGYHGPAVADEFDNPTTDIRKDRCSKCMRGCEMRGMVANFGGFLSINKLSQ*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0040	cloud	direct	high	698	0.999	GCA_000520055.1_01656
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1602573	1603451	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	33136	34014	GCA_000520055_1_1_1529	GCA_000520055_1_1_1529	+	5402276	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLGGEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVKGKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGIDSIDELSIEQIPLAVEYIHRVVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYDYGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0041	cloud	direct	high	878	0.999	GCA_000520055.1_01658
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1603505	1604242	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	34068	34805	GCA_000520055_1_1_1530	GCA_000520055_1_1_1530	+	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MLYSNILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEDYFRMSPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALSWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFEREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQAGDILLCCFGASVANHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0042	persistent	direct	high	737	0.999	GCA_000520055.1_01659
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1604239	1604820	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	34802	35383	GCA_000520055_1_1_1531	GCA_000520055_1_1_1531	+	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGYDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKPKTPEYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0043	cloud	direct	high	581	0.998	GCA_000520055.1_01660
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1605056	1608529	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	35619	39092	GCA_000520055_1_1_1532	GCA_000520055_1_1_1532	+	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGKAHTPVEAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNPSSVRLLIQLQRNGNWVTENDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWSGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGASFEPQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGKGTDARLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETAARYLGSALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGRASDDAEGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNEVFLKYLTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFSGAKHEKEHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKATAGITIS*	hallmark_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0044	cloud	direct	high	3473	1.0	GCA_000520055.1_01661
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1608597	1608923	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	39160	39486	GCA_000520055_1_1_1533	GCA_000520055_1_1_1533	+	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLCAVILSAVVWQVAAATPASAAEHQSTLSAGYLHASTNVPGSDDLNGINVKYRYRQSLNGIVHFCDAAWIASHTTFFTDSSVGNTLRFLMACRITLFSDSMAFVV*	mmseqs_cdd	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0045	cloud	direct	high	326	0.997	GCA_000520055.1_01662
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1608997	1609344	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	39560	39907	GCA_000520055_1_1_1534	GCA_000520055_1_1_1534	-	5402276	.	PFAM:PF00872.17	Transposase,-Mutator-family	MFLALGINIAGQKELLGMRLAENEGANFWFNVLTELKNRGLNDILIACVYGLKEFPEARIQLCIVHMVRNSMRFVSWKEYKAVTRDLKAISLPQKRQASRHWKRLLRPGTAAIRR*	common_virus_hmm	common_virus	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0046	cloud	direct	high	347	0.997	GCA_000520055.1_01663
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1609796	1610065	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	40359	40628	GCA_000520055_1_1_1535	GCA_000520055_1_1_1535	+	5402276	.	.	hypothetical protein	MASVPTLFWANSYDLFVLFVSVSIIFDIHATSDIDNLSCGVLSALPGGRISKLQDLLLNTVKPSTLHVVESKIQFLVDDLSAIGLDISG*	.	hypothetical_protein	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0047	cloud	direct	high	269	0.996	GCA_000520055.1_01664
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	CDS	1610820	1611467	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	41383	42030	GCA_000520055_1_1_1536	GCA_000520055_1_1_1536	-	5402276	.	pfam06416	Effector protein NleG. Many bacterial pathogens deliver effector proteins into host cells via a type III secretion system. These effector proteins then alter the host cell's biology in ways that are advantageous to the pathogen. The NleG protein and its homologs form the largest family of effector proteins in the enterohemorrhagic Escherichia coli O157:H7, with 14 members identified in the Sakai strain alone.	MPVILNFSSERVLSESELEALRHVGRVSQSEQLVVRGRTMRLHHISFMDSFSVEPVSGGLLDRLSARGHRLLAENLEIQLNRGHTFLQAFRLYMEQSRATPCTRQNVSSAIQNKINSHAFTVSHQDFSCHEQHLNCPITLCIPETGVFVRNAKNSEICSLYDHNALTELIRRNAPHPLSREPFVPEMIVSKDECHFNLIEQYFCILATQNICTRI*	mmseqs_cdd	nonviral_gene	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_CDS_0048	cloud	direct	high	647	0.998	GCA_000520055.1_01665
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1916072	1917058	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	1	987	GCA_000520055_1_1_1811	GCA_000520055_1_1_1811	-	5402276	.	pfam13678	NFkB-p65-degrading zinc protease. This family of bacterial metallo-peptidases is thought to compromise the inflammatory response by degrading p65 thereby down-regulating the NF-kappaB signalling pathway. NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52; and the heterodimeric p65-p50 complex appears to be most abundant one.	MKIPVLQPGFNFFAPAGYSAAVAPNRAENAYADYVLDIGKRIPLSAADLSNVYESVIRAVHDSRSRLIDQHTVDMIGNTVLDALSRSQTFRDAVSYGIHNEEVHIGCIKYRNEYELNGESAIKIDDIQSLTCNELYGYDVGQEPILPICEAGENENEEPYVSFSVAPDTDSYEMPSWQEGLIHEIIHHVTGASDPSGDSNIELGPTEILARRVAQELGWSVPDFKGYAEPEREAHLRLRNLNALRQAAMRHEKNERAFFERLGTISDRYEASPDFTEYSAVSNIGYGFIQQHDFPGVAIDENLQDVNQIQLYHGAPYIFTFGDVDRHN*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0001	cloud	direct	high	986	0.999	GCA_000520055.1_01951
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1917488	1917757	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	1417	1686	GCA_000520055_1_1_1812	GCA_000520055_1_1_1812	-	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQCLCGCGKHDGREHVQSPTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0002	cloud	direct	high	269	0.996	GCA_000520055.1_01952
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1917759	1919072	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	1688	3001	GCA_000520055_1_1_1813	GCA_000520055_1_1_1813	-	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEAMRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPGTDGALITGLTFLDPKDATQVQGLFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0003	cloud	direct	high	1313	0.999	GCA_000520055.1_01953
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1919137	1919736	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	3066	3665	GCA_000520055_1_1_1814	GCA_000520055_1_1_1814	-	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEQQATLSAGYLHARTNAPGSDNLNGINVKYRYEFTDTLGMVTSFSYAGDRNRQITRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0004	shell	direct	high	599	0.998	GCA_000520055.1_01954
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1919803	1923282	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	3732	7211	GCA_000520055_1_1_1815	GCA_000520055_1_1_1815	-	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGRAHTPVEAKDNLKSTQMMSVIDAIGEGPVEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGSETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLVQTTSQSDRNPASVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIGQYCDQRVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGENSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAAPAGVELTPGYFQITAVPKLTIYDPTVQFEFWFSGAKIADAAQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAFVEASGRASNDAAGYLELFREKIGKTHLAEALWAEIDNSQLKDEMAEMQTTITETRNEITQTVSKTLEDQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPAFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGTITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0005	cloud	direct	high	3479	1.0	GCA_000520055.1_01955
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1923529	1924110	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	7458	8039	GCA_000520055_1_1_1816	GCA_000520055_1_1_1816	-	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIRGEDTAPEAVYARLHEPLGEGAVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMAAWGAALSAGGFSATTMLFSLGASMILGGVAQMLAPKPKTPEYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGDGKVVVIGRQG*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0006	cloud	direct	high	581	0.998	GCA_000520055.1_01956
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1924107	1924850	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	8036	8779	GCA_000520055_1_1_1817	GCA_000520055_1_1_1817	-	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTQTESVILAHTRRCVPAESCGFVVRTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALSWWLVCRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFEREDDWWRNGQNLYLDNMEATGFYRISLPSAQPGDILLCCFGASVANHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0007	persistent	direct	high	743	0.999	GCA_000520055.1_01957
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1924856	1925554	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	8785	9483	GCA_000520055_1_1_1818	GCA_000520055_1_1_1818	-	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQDIHEETLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGREYQAYPIEGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELRDRWVVEQMSSLTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCEMRGMVANFGGFLSINKLSQ*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0008	cloud	direct	high	698	0.999	GCA_000520055.1_01958
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1925554	1925883	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	9483	9812	GCA_000520055_1_1_1819	GCA_000520055_1_1_1819	-	5402276	.	PFAM:PF05939.12	minor-tail-protein	MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVTLSVTREEARHLEAFLAEHGGWKAFLWKPPYAYRQIKVTCAGWSARVGMLRVEFSAEFKQVVN*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0009	shell	direct	high	329	0.997	GCA_000520055.1_01959
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1925880	1928492	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	9809	12421	GCA_000520055_1_1_1820	GCA_000520055_1_1_1820	-	5402276	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MSQPAGDLVIDLSLDAARFDEQMARVRRHFSSLEADARKTASTVEQGLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIVTQLAGGQNPFLIMLQQGGQISDSFGGPLSLLTLLKEELLGIRDASESSEESLSDTANALAENARNAGELGRFMSVARVAAGGGVAVLAALAAAAWQAEQADRALLRSLILTGGAAATTTAELWKMAGVISDEAGGGIRQAAENLARLAESGKYTAGQLRIMGETSQRWLQTVGDDAGKVEKAFEGIAADPVKALASLNQQYNFLSVSQLRHIDELERTKGKQAAVTEAMSLFADVMNARLEQLDKAATPVEKIWDDVKTWTSDAWAWIGDHTLGALSLITDVVAGTVEQVKLLLVQGDLALAEFIQSAWETTKNVPGVGALFGELAEENRVFIEKTKRDELALRKSIAERDARIRQGEMGYINRSRATGVSKGPGQQEAVSRLAEELTGKKHTSPKTRSAGEREEEQAREALLALEAELRTLEKHSGANEKISRQRRDLWKAESQYAVLKEAATKRQLSEQEKSLLAHKDETLEYKRQLAELGDKVEYQKRLNELAQQAVRFEEQQSAKQAAISAKARGLTDRQAQRESEAQRLRDVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGLKSGWGEWAESATDSFSQVKSAATQTFDGIAQNMAAMLTGAEADWRGFTRSVLSMMTEILLKQAMVGIVGRIGSAIGGAFGGGASASSGTAIEAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYAEGGYVGGAGSPAQMRRAEGINFNQNNHVVIQNDGINGQAGPQLMKAVYDMARKGAQDELRLQLRDGGMLSGSGR*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0010	cloud	direct	high	2612	1.0	GCA_000520055.1_01960
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1928473	1928886	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	12402	12815	GCA_000520055_1_1_1821	GCA_000520055_1_1_1821	-	5402276	.	PFAM:PF06223.11	Minor-tail-protein-	MGRPDWRAMLAGMTSTEYADWRRFYCTHYFQDTQLDAHFSGLMYAVLSLFFGDPDMHPADFSLLAPACEEEQTEMPDEEEMLMQKATGVAGGVRFGGDGGRDISPSADVVDVSEDDVALMMASAGISGGVRYVPASG*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0011	cloud	direct	high	413	0.998	GCA_000520055.1_01961
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1928913	1929335	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	12842	13264	GCA_000520055_1_1_1822	GCA_000520055_1_1_1822	-	5402276	.	PFAM:PF06894.10	tail-assembly-chaperone	MFLKTEQFEYNGVSVTLSELSALQRFDYIKFVSDAEQQETTKHYVVHINQRYLETASLLVAMSLWHSHSLKGTLASPETEMQQIRREVMLGWPADALNQATNRVLYLSGMLDNRHDADPEQTGKAEATEPVTSKKHSKAS*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0012	cloud	direct	high	422	0.998	GCA_000520055.1_01962
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1929349	1930101	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	13278	14030	GCA_000520055_1_1_1823	GCA_000520055_1_1_1823	-	5402276	.	PFAM:PF16463.4	tail-tube-protein	MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKWLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0013	cloud	direct	high	752	0.999	GCA_000520055.1_01963
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1930109	1930504	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	14038	14433	GCA_000520055_1_1_1824	GCA_000520055_1_1_1824	-	5402276	.	PDB:3FZ2_G	Minor-tail-protein-	MKHTELRAAVLDALEKHDTGATLFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0014	shell	direct	high	395	0.997	GCA_000520055.1_01964
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1930501	1931079	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	14430	15008	GCA_000520055_1_1_1825	GCA_000520055_1_1_1825	-	5402276	.	PFAM:PF06763.10	minor-tail-protein	MAIKGLEQAVENLSRISKTAVPGASAMAINRVASSAISQSASQVARETKVRRKLVKERARLKRATVKNPQARIRVNRGDLPVIKLGNARVVLSRRRRRKKGQRSSLKGGGSVLVVGNRRIPGAFIQQLKNGRWHVMQRVAGKNRYPIDVVKIPMAVPLTTAFKQNIERIRRERLPKELGYALQHQLRMVIKR*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0015	shell	direct	high	578	0.998	GCA_000520055.1_01965
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1931091	1931444	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	15020	15373	GCA_000520055_1_1_1826	GCA_000520055_1_1_1826	-	5402276	.	PDB:2KX4_A	Tail-attachment-protein	MADFDNLFDAAIARADETIRGYMGTSATMTSGEQSGAVIRGVFDDPENISYAGQGVRVEGSSPSLFVRTDDVRQLRRGDTLTIGEENFWIDRISPDDGGSCHLWLGRGVPPAVNRRR*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0016	shell	direct	high	353	0.997	GCA_000520055.1_01966
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1931456	1931851	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	15385	15780	GCA_000520055_1_1_1827	GCA_000520055_1_1_1827	-	5402276	.	PFAM:PF14000.5	DNA-packaging-protein	MTKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELEEELDDTDDAAGQDTSVSPENALTGHENEVVSAQTDTVTDTAALVTVVALVTLHTDALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLARMQ*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0017	shell	direct	high	395	0.997	GCA_000520055.1_01967
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1931893	1932918	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	15822	16847	GCA_000520055_1_1_1828	GCA_000520055_1_1_1828	-	5402276	.	PDB:3BQW_A	Capsid-protein	MSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIIMQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVRDKLDTRRGSHSELETAVKDLGKAVSYKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDEFVSVQLA*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0018	shell	direct	high	1025	0.999	GCA_000520055.1_01968
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1932974	1933306	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	16903	17235	GCA_000520055_1_1_1829	GCA_000520055_1_1_1829	-	5402276	.	PDB:1TD0_D	Head-decoration-protein	MTSKETFTHYQPLGNSDPAHTATAPGGLSAKAPAMTPLMLDTSSRKLVAWDGTTDGAAVGILAVAADQTSTTLTFYKSGTFRYEDVLWPEAASDETKKRTAFAGTAISIV*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0019	shell	direct	high	332	0.997	GCA_000520055.1_01969
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1933316	1934635	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	17245	18564	GCA_000520055_1_1_1830	GCA_000520055_1_1_1830	-	5402276	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MTAELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGISRLTDAVSGDSLTAGEAPTALALSGDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAVLDTEAAVYSGQEAIDAGLADELVNSTDAITVMRDALDARKSRLSGGRMTKETQSTTVSATASQADVTDVVPATEGENASAAQPDVNAQITAAVAAENSRIMGILNCEEAHGREEQARVLAETPGMTVETARRILAAAPQSAQARSDTALDRLMQGAPAPLAAGNPASDAVNDLLNTPV*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0020	shell	direct	high	1319	0.999	GCA_000520055.1_01970
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1934616	1936217	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	18545	20146	GCA_000520055_1_1_1831	GCA_000520055_1_1_1831	-	5402276	.	PFAM:PF05136.12	Portal-protein	MKMSTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRAWNPPGESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYSAAPVRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFESGLRQSTEEEKSDSRAA*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0021	shell	direct	high	1601	0.999	GCA_000520055.1_01971
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1936214	1936420	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	20143	20349	GCA_000520055_1_1_1832	GCA_000520055_1_1_1832	-	5402276	.	PDB:2L6Q_A	Head-Tail-Connector-Protein	MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTTTSVSDLKKYIAELEVQTGMTQRRRGPAGFYV*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0022	shell	direct	high	206	0.995	GCA_000520055.1_01972
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1936417	1938342	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	20346	22271	GCA_000520055_1_1_1833	GCA_000520055_1_1_1833	-	5402276	.	PFAM:PF05876.11	Large-Terminase	MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADASYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFSNGRGFWCLGGKAAKNYREKSVDVAGYDELAAFDEDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVACPHCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFTTWVQIVKDWMKTKGDTGKRKTFVNTTLGETWEAKIGERPDAEVMAERKEYYSAPVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEQTLLRVDEAINKTYTRRNGAEMSVSRICWDTGGIDPTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKRNKNGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQVEKWVDGRKKILWDSKKRRNEALDCFVYALAALRISISRWQLDLSALLASLQEEDGAATNKKTLAEYARALSGEDE*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0023	shell	direct	high	1925	0.999	GCA_000520055.1_01973
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1938317	1938862	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	22246	22791	GCA_000520055_1_1_1834	GCA_000520055_1_1_1834	-	5402276	.	CDD:pfam07471	DNA-packaging-protein	MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG*	hallmark_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0024	shell	direct	high	545	0.998	GCA_000520055.1_01974
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1939564	1939878	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	23493	23807	GCA_000520055_1_1_1835	GCA_000520055_1_1_1835	-	5402276	.	pfam06069	PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	MLHDHVAECLEKKGLYRRAAERWAKVMVQLSDDQKRKVAAQKRAECLRKARRTPVSPVNLTEIKQAVNRLHSELGMGFEERRVFRRYKGTGEQNTSGNARSKKC*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0025	cloud	direct	high	314	0.997	GCA_000520055.1_01975
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1940344	1940811	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	24273	24740	GCA_000520055_1_1_1836	GCA_000520055_1_1_1836	-	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MNRVLCVVIIVLLVACGVLSLGLNHYRDNAITYKAQRDKKASELKLANVTITDMQVRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGVDNATGPRLADTAERDYFILRERLMAMQKQLEGAQEYIRTQCIP*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0026	cloud	direct	high	467	0.998	GCA_000520055.1_01976
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1940819	1940950	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	24748	24879	GCA_000520055_1_1_1837	GCA_000520055_1_1_1837	-	5402276	.	.	hypothetical protein	MSDKLITLAKILCVIVGISFSLMLVAICFSTAWRVLTLSWLVG*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0027	cloud	direct	high	131	0.992	GCA_000520055.1_01977
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1940963	1941145	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	24892	25074	GCA_000520055_1_1_1838	GCA_000520055_1_1_1838	-	5402276	.	.	hypothetical protein	MGKYKRILLRLTMKNGLELKAPVTDDVSRALAFAIKWVAVGIAVSPMLYGLAKLVIALKS*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0028	cloud	direct	high	182	0.995	GCA_000520055.1_01978
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1941301	1941834	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	25230	25763	GCA_000520055_1_1_1839	GCA_000520055_1_1_1839	-	5402276	.	CDD:COG3772	lysozyme	MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGTTRVDGKPVVPGMKLSKEKCDQVNAIERDKALEWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDLKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0029	shell	direct	high	533	0.998	GCA_000520055.1_01979
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1941885	1942229	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	25814	26158	GCA_000520055_1_1_1840	GCA_000520055_1_1_1840	-	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0030	cloud	direct	high	344	0.997	GCA_000520055.1_01980
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1942234	1942449	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	26163	26378	GCA_000520055_1_1_1841	GCA_000520055_1_1_1841	-	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0031	persistent	direct	high	215	0.995	GCA_000520055.1_01981
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1942599	1944452	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	26528	28381	GCA_000520055_1_1_1842	GCA_000520055_1_1_1842	-	5402276	.	6YP6_A	NanS-p	MTFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAITAEGDVVVSGATEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLIARTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRMATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLVLEINAPASS*	hhsuite_tools	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0032	cloud	direct	high	1853	0.999	GCA_000520055.1_01982
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1944700	1945044	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	28629	28973	GCA_000520055_1_1_1843	GCA_000520055_1_1_1843	+	5402276	.	.	hypothetical protein	MPNLCIQHDAGCLPVNSAMTRQNPQLAYTIRNQTSVIMPRRPGGFIMQDFFNKRSACQATVNYLNCEAFNISLSGVFPVIKSPQKRVRADKCGVARCTGFEPATWRLCVARSHH*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0033	cloud	direct	high	344	0.997	GCA_000520055.1_01985
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1945096	1946154	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	29025	30083	GCA_000520055_1_1_1844	GCA_000520055_1_1_1844	-	5402276	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MFNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWTGDEDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDAGYEAKGRALKQHVMAPLISYFRDARAALGITAKQIVDATGKKNMVSHWFSASQWQLPNESDYLKLQALFARVAEEKHQRGELEKPHHQLLETYTSLNRQYAELQSEYKHLRRYFGVTAQVPYTDVWTHKPVQYYPGKHPCEKPAEMLQQIISASSRPGDLVADFFMGSGSTVKAAMALGRRATGVELETERFEQTVREVQDLVSQNG*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0034	cloud	direct	high	1058	0.999	GCA_000520055.1_01986
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1946306	1946626	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	30235	30555	GCA_000520055_1_1_1845	GCA_000520055_1_1_1845	-	5402276	.	PF08221.11	RNA polymerase III subunit RPC82 helix-turn-helix domain	MSENRVSTVNALAAVNTGLSACWLFRQELLVCHVNRKREKDMLKQRDMTETARAVFNELSATEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLQS*	hhsuite_tools	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0035	cloud	direct	high	320	0.997	GCA_000520055.1_01987
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1946716	1947405	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	30645	31334	GCA_000520055_1_1_1846	GCA_000520055_1_1_1846	-	5402276	.	pfam06323	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	MNNQYLQFVREQLMIATADLSGATKGQLEAWQENALFDTGRYRRKKIRYRDEVTGKMITRDNPPIPGKQSLAKGSSIALVSPVEFATSSWRRTLLELEEHQKAWLLWCYGGNICWEHQIAITQWVWNEFKTQSGTRKIAVKTLERVKKLIWLAAQDVRGWVTGCEVYQRQELARLCGVKPDNWSHNYANYWREMCDIFKRLDRESLICSVKIRAQQKATFSRRDIAKVN*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0036	cloud	direct	high	689	0.999	GCA_000520055.1_01988
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1947402	1947761	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	31331	31690	GCA_000520055_1_1_1847	GCA_000520055_1_1_1847	-	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MLIDLVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVRGKPVSGGRLEIKITEVGCA*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0037	cloud	direct	high	359	0.997	GCA_000520055.1_01989
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1947774	1948823	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	31703	32752	GCA_000520055_1_1_1848	GCA_000520055_1_1_1848	-	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVLVPELGLVIVKPGRESMSAFHNGRILVEPEPKSMRALPSGVVPAVHQPLAEDKSLLPFFSDERVIRAAGGAGALSDWLLRHVKSCQWLHGDYHHSETVIHRYGTGAMVLCWHCDNQLREQTSDSLDQLAQQNLAAWMIDIIRHAMNGAQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSVYRESDIIPGEQTATSILKQRTKNIALPSHTHQQQNPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0038	shell	direct	high	1049	0.999	GCA_000520055.1_01990
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1949271	1949483	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	33200	33412	GCA_000520055_1_1_1849	GCA_000520055_1_1_1849	-	5402276	.	pfam01848	Hok/gef family. 	MLHKRRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0039	shell	direct	high	212	0.995	GCA_000520055.1_01991
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1949673	1949777	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	33602	33706	GCA_000520055_1_1_1850	GCA_000520055_1_1_1850	-	5402276	.	.	hypothetical protein	MSDDISLAMEGALAVIAVVGVYCLVVFLMDRLGN*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0040	cloud	direct	high	104	0.99	GCA_000520055.1_01993
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1949893	1950606	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	33822	34535	GCA_000520055_1_1_1851	GCA_000520055_1_1_1851	-	5402276	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MHRVCLEANRYLDKYDAMAKEVNKLLGRIAPPAPVFNGEYGDAYQGAREDLSIWKRRALEADEHVRRLEQINDHMVKEAQGESRMGEPVIREPAPVVPEEATPENVEMLSGYVSTYKLTDSERDIAAEIWNACRAAMLQAGNFRENKGSSTNNFREISETSTNYPVTPDGWISCSERMPDDGQHVIILCDGAFVLYAQYRDGEFFDVVRNGDEFFETQSRNVTDWMPLPEPPQEVRQ*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0041	cloud	direct	high	713	0.999	GCA_000520055.1_01994
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1950807	1951019	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	34736	34948	GCA_000520055_1_1_1852	GCA_000520055_1_1_1852	-	5402276	.	.	hypothetical protein	MSNAQKVINAEKYNEWVKKFSEQIFKITGDENAAKNELEPWTPEGVDPNYCWWDVDPVDAANEAMSYHND*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0042	cloud	direct	high	212	0.995	GCA_000520055.1_01995
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1951068	1951424	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	34997	35353	GCA_000520055_1_1_1853	GCA_000520055_1_1_1853	-	5402276	.	.	hypothetical protein	MEIKPEDELSNIVLFPVKEDDPRNQVNFLYEPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRILRQEERERRRNIEKLIQIERNVKARIRRVTKSRTE*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0043	cloud	direct	high	356	0.997	GCA_000520055.1_01996
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1951402	1952064	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	35331	35993	GCA_000520055_1_1_1854	GCA_000520055_1_1_1854	-	5402276	.	pfam13935	Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	MLHRRAYIGQSAWEYNRSFFCQKWKGEPGGVIAECHVNCLVETDAQAYANAEFIAAFNPNVALALLDERERNQQYIKSRDQENEEIALTEGKLLIENGRLVADTLRHLADNEIDSDYFAITSTNENGTEIDHEMAITDYALQAAGTVDELVAALESAENRIAELEAREISLPERSSMLHRTDFHDDYQTVMAYKVSEVIAAIRAAGIRIKGEEHGNKTRR*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0044	cloud	direct	high	662	0.998	GCA_000520055.1_01997
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1952117	1952413	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	36046	36342	GCA_000520055_1_1_1855	GCA_000520055_1_1_1855	-	5402276	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MRVRVYIAGPMTGYENFNREAFHKAEEELKREGHTVLNPAVLPDGLTQPHYMDICMAMIRCVDAIYMLNGWQRSAGAKAELALAEKLGHAVIYQEVAQ*	phrogs_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0045	cloud	direct	high	296	0.997	GCA_000520055.1_01998
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1952410	1952802	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	36339	36731	GCA_000520055_1_1_1856	GCA_000520055_1_1_1856	-	5402276	.	pfam06163	Bacterial protein of unknown function (DUF977). This family consists of several hypothetical bacterial proteins from Escherichia coli and Salmonella typhi. The function of this family is unknown.	MAKVFTPEDREEVTARIVEFVRLSGRETFRQLADKTGVSKTAIRRLSGALAASGDVWLSGCGVFPSEQAYRVWRKTPEKAADPTLIRKLPDGEIRRYNRRQNIICRECRQSEVMQRVLAFYRGNFQEVME*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0046	cloud	direct	high	392	0.997	GCA_000520055.1_01999
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1952818	1953588	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	36747	37517	GCA_000520055_1_1_1857	GCA_000520055_1_1_1857	-	5402276	.	PFAM:PF04079.15	MarR-family-transcrition-regulator	METVLHALKAMGKANSVELAARLDISREEVLNELWELKKNGVVDKTGHTWFLAGEGESRVTEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCIPGADLPAEPEAASVTETDSKAFPQPTGVALPVREAETQEEIKTESVAVTVQSQPSFTRKHPDGLILPSLHVANRELRRAKGQVQKWERVCAALRELNKHRDIVRQITDSSRRVVSEK*	phrogs_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0047	cloud	direct	high	770	0.999	GCA_000520055.1_02000
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1953618	1954358	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	37547	38287	GCA_000520055_1_1_1858	GCA_000520055_1_1_1858	-	5402276	.	PDB:4M4W_K	Replicative-helicase	MKNITSGGVLARVSRFVPQDAIPPYRTVAEWREWQLAEGRKRSEEVNRLNHQTRVEKIINRSGIQPLHRKCTFGNYRVQNDGQRHALSQAKSIAAELEGGCTNFVFSGRPGTGKNHLAAAIGNHLLAKGRSVIVITVADVMLALHGSYDNKNSGEKFLQGLCGVDLLVLDEIGMQRDTRNEQVTLNQIVDRRTASLLSVGMLTNLNHAAMNTLLGERVMDRMSMNGGRWVTFNWESWRPNVSQHRN*	rep_hall_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0048	cloud	direct	high	740	0.999	GCA_000520055.1_02001
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1954365	1955333	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	38294	39262	GCA_000520055_1_1_1859	GCA_000520055_1_1_1859	-	5402276	.	PFAM:PF04492.12	Replication-protein-O	MSSKLHGLVWEGCAFTGMILSRVAVMARLADYSNDEGVSWPAIETIRRQIGARSESTVKSAIAELAKEGWLTKEERKVGGRNVSNIYRLNVEKLEAAAAAARESYKPKRKISPAKNDPLTVDPSNIDPSTVDPSNFDGSTVDKKLPIRGAMIDPDPSVLKPDPSDKRSSCPDVSLPDEKQASPVERFLEKHPDAHTWNVPKRQWGTREDLTCAQWIWGRVVALYEQAASDDGEVSRPREPNWTTWANDVRMMRMLDGRSHRQICEMFGRVQRDSFWVKNIMSPAKLREKWDELVIRLGRSPAQRCVNHISEPDTEIPPGFRG*	rep_hall_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0049	cloud	direct	high	968	0.999	GCA_000520055.1_02002
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1955356	1955781	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	39285	39710	GCA_000520055_1_1_1860	GCA_000520055_1_1_1860	-	5402276	.	pfam06254	Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	MKIKHEHIRMAMNAWARPDGEKVPAAGITQAYFELGMTFPELYDDSHPEALARNTQKIFRWVEKDTPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYYREIVERRDRLVKDVDDFVASAVVLYDQMNRGGPAGNAVVMH*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0050	cloud	direct	high	425	0.998	GCA_000520055.1_02003
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1955765	1956046	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	39694	39975	GCA_000520055_1_1_1861	GCA_000520055_1_1_1861	-	5402276	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MEELRIFLNSLSSDEQRMFACECGTSIGYLRKALSKGQVLGASLCVLIERASNGEVTRQQLRPFDWMNIWPELEDTKTLTQPLSRSLIHENQA*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0051	cloud	direct	high	281	0.996	GCA_000520055.1_02004
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1956147	1956566	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	40076	40495	GCA_000520055_1_1_1862	GCA_000520055_1_1_1862	+	5402276	.	PFAM:PF10078.8	transcriptional-regulator	MDKYEFRRQQLIKIRDEKCDGKAVNVARKIGREPSYVSRMLYPEGKKGKKRIADDMVEIIEESFGLPRGWMDGIVSSSTNTASSYETRVLTPRQRIFLDLLDELPESEADKLLKTLEEKKQYYNMIYEEIRKKKAQNAS*	phrogs_hmm	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0052	cloud	direct	high	419	0.998	GCA_000520055.1_02005
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1956751	1956984	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	40680	40913	GCA_000520055_1_1_1863	GCA_000520055_1_1_1863	+	5402276	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNNESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLARNTD*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0053	cloud	direct	high	233	0.996	GCA_000520055.1_02006
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1956996	1957634	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	40925	41563	GCA_000520055_1_1_1864	GCA_000520055_1_1_1864	+	5402276	.	.	hypothetical protein	MEFKDLPPSIQEIAAHTLRHRLNELELESVTKKDTDNMARNVRDAFTGLYFCASINKHDSESVANKIAETTAQNINTKPTEEEIDQFAHDAGLKNKKEKSPYAGNMFVYDNLIRIRGEIPAEYLARVHQALLKNLETELFDGNTNGFFMVSGLDKDWDAEKRWNVATWLFSNRAAALEASACICGLFLTDHKYNLDVYSYIYAEHGPLWIDW*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0054	cloud	direct	high	638	0.998	GCA_000520055.1_02007
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1957635	1957844	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	41564	41773	GCA_000520055_1_1_1865	GCA_000520055_1_1_1865	-	5402276	.	.	hypothetical protein	MPNKKRNPLIEKQIECLVNQLRQSGLLKTHSELRLTESAFDDKLNNVLYNGIIDFNRSVGRRGPAGVSL*	.	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0055	cloud	direct	high	209	0.995	GCA_000520055.1_02008
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1958409	1958597	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	42338	42526	GCA_000520055_1_1_1866	GCA_000520055_1_1_1866	+	5402276	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	METLLPNVNTSEGCFDIGVLLSNREFTEDAINMRKYEPYLLNDNSILSRIALLELGIFGERQ*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0056	cloud	direct	high	188	0.995	GCA_000520055.1_02010
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1958594	1958782	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	42523	42711	GCA_000520055_1_1_1867	GCA_000520055_1_1_1867	+	5402276	.	PF07358.11	Protein of unknown function (DUF1482)	MTSAFALMMTVFLITGESQNVITGIYASKESCLQARDEQKISGECLPVKKVSLYLNNETPAG*	hhsuite_tools	hypothetical_protein	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0057	cloud	direct	high	188	0.995	GCA_000520055.1_02011
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1958875	1961337	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	42804	45266	GCA_000520055_1_1_1868	GCA_000520055_1_1_1868	+	5402276	.	PRK09709	exodeoxyribonuclease VIII. 	MSTDKEEFALYCEAKNDKVRKRLGIKGGFYWTTAKKLSVAISRCITAMDDNDYDEDDFKKPVRVHLPVVNDLPPEGVFDTEFCNRYEKGGEDGITMVFIAPSPSVQEKPASTDNTNVNGEDMTEIEENMLLPVSGQELPIRWLAQHGSEKPVTHVAREELQALHIARAEELPAVTALAISHNTKLLDPLEIRDLHKLARDTDKVFPNPGNSDLGLITAFFEAYLDADYTDRGLLTKEWMKGNRVSRITRTASGANAGGGNKTDRNPNLVHTFDTLDVEIAAATLPMDFNIYEIPGSVYRRAKEIVLKRESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINAYLTETDHENPSKETLTAARHTPEKDILEEVNRELAAKQETEEEENDEEKPQPSCAMADEQATAETVEPDATEHHQDTQPLDAQSQVNSVDAKYQKLRAELHEARKNIPPQNPVDADKLLAASRGEFVEGISDPNDPKWIKGIQTRDSVYQNQPETEQNDQKAEQNSPNTQQNEPETKQPEPVVQQEPEKICTACGQRSGGNCPDCGAVMGDATYQETFDDKNLVEVQEDDSEKMEGAEHPHKENAGSAQDHASDSETGETADPLITVNGHRIITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADS*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0058	cloud	direct	high	2462	1.0	GCA_000520055.1_02012
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1961425	1961661	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	45354	45590	GCA_000520055_1_1_1869	GCA_000520055_1_1_1869	+	5402276	.	pfam06806	Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	MIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRHLA*	mmseqs_cdd	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0059	shell	direct	high	236	0.996	GCA_000520055.1_02013
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1961696	1962976	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	45625	46905	GCA_000520055_1_1_1870	GCA_000520055_1_1_1870	+	5402276	.	PDB:1Z19_B	Integrase	MKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRIAGELRASVCYAIKTGAFDYAKQFPASHNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLAVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLYAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGIRPGELCALGWEDIDLKNGTMIIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMALTRLSKEHIIDVHLREFGRTEKQKCTFVFQPEVSAKVKNYGDHFTVDSIRQMWDAAVKRAGIRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVTLLNTQLSEFAPTMPHNEAMKS*	common_virus_hmm	common_virus	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0060	shell	direct	high	1280	0.999	GCA_000520055.1_02014
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	CDS	1963164	1964183	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	47093	48112	GCA_000520055_1_1_1871	GCA_000520055_1_1_1871	-	5402276	.	PRK10083	putative oxidoreductase; Provisional	MKSILIEKTNQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGDGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWVINNSQTPLGEIFAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQLITGKELSIFSSRLNANKFPVVIDWLSKGLIEPEKLITHTFEFQHVADAISLFEQDQKHCCKVLLTFSE*	mmseqs_cdd	nonviral_gene	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_CDS_0061	persistent	direct	high	1019	0.999	GCA_000520055.1_02015
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2264754	2265740	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	1	987	GCA_000520055_1_1_2167	GCA_000520055_1_1_2167	-	5402276	.	pfam13678	NFkB-p65-degrading zinc protease. This family of bacterial metallo-peptidases is thought to compromise the inflammatory response by degrading p65 thereby down-regulating the NF-kappaB signalling pathway. NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52; and the heterodimeric p65-p50 complex appears to be most abundant one.	MKIPVLQPGFNFFAPAGYSAAVAPNRAENAYADYVLDIGKRIPLSAADLSNVYESVISAVHDSRSRLIDQHTVDMIGNTVLDALSRSQTFRDAVSYGIHNEEVHIGCIKYRNEYELNGESAIKIDDIQSLTCNELYGYDVGQEPILPICEAGENENEEPYVSFSVAPDTDSYEMPSWQEGLIHEIIHHVTGASDPSGDSNIELGPTEILARRVAQELGWSVPDFKGYADPEREAHLRLRNLNALRQAAMRHEKNERAFFERLGTISDRYEASPDFTEYSAVSNIGYGFIQQHDFPGGAIDENLQDVNQIQLYHGAPYIFTFGDVDRHN*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0001	cloud	direct	high	986	0.999	GCA_000520055.1_02325
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2266170	2266439	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	1417	1686	GCA_000520055_1_1_2168	GCA_000520055_1_1_2168	-	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQRLCGCGKHDDREHGELLTAQLRLGPADILESDENGIIPEQDGVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0002	cloud	direct	high	269	0.996	GCA_000520055.1_02326
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2266441	2267754	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	1688	3001	GCA_000520055_1_1_2169	GCA_000520055_1_1_2169	-	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAGEAKKNAGEAETSARNAGISASQAEENAANADTSAGDASESARQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGDAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0003	cloud	direct	high	1313	0.999	GCA_000520055.1_02327
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2267819	2268418	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	3066	3665	GCA_000520055_1_1_2170	GCA_000520055_1_1_2170	-	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHVSTNVPGSDELNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0004	shell	direct	high	599	0.998	GCA_000520055.1_02328
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2268489	2271986	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	3736	7233	GCA_000520055_1_1_2171	GCA_000520055_1_1_2171	-	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGRAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGSETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLVETTSKGDRNPASVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPVPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFTQLAPGNYRLTVRAVNAWGQQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETTARYLGTALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGQPSDDASGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLTEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPDGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNEVFLKYLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANSGALNNVTINQNCTIKGMLEATQVRGDFVKAVSKAFPKKVGTWGNTETPNGTVTVTISDDHNFDRQIIIPPIIFNGIAYDDPGSGNNPGGTRYTGYGFEVRKNGVLIASRETKGAIPGSYSAVIDMPSGGGSVTLEFKIFQKGNQGAGNITDCTVIVTKKAASGISIR*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0005	persistent	direct	high	3497	1.0	GCA_000520055.1_02329
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2272120	2272647	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	7367	7894	GCA_000520055_1_1_2172	GCA_000520055_1_1_2172	+	5402276	.	PRK15388	superoxide dismutase [Cu-Zn]. 	MKCKIIAAIAMLTAASCGYAAEQEVPMNLVSADGKEVSIGKITIQETPYGLLFTPALHSLSEGIHGFHVHEKGNCAPALKDGKPVAALSAGGHFDPKNTGKHLGPWSPDGHLGDLPALFVTHDGKANYPVLAPRLNSLKEIKGRSLMLHAGGDNHHDHPEPLGGGGARMACGIIQ*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0006	cloud	direct	high	527	0.998	GCA_000520055.1_02330
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2272838	2273419	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	8085	8666	GCA_000520055_1_1_2173	GCA_000520055_1_1_2173	-	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMAAWGAALSAGGFSATTMLFSLGASMILGGVAQMLAPKPKTPEYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQA*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0007	cloud	direct	high	581	0.998	GCA_000520055.1_02331
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2273416	2274159	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	8663	9406	GCA_000520055_1_1_2174	GCA_000520055_1_1_2174	-	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALSWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFEREDDWWRNGQNLYLDNMEATGFYRISLPSAQPGDILLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSAWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0008	persistent	direct	high	743	0.999	GCA_000520055.1_02332
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2274170	2274868	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	9417	10115	GCA_000520055_1_1_2175	GCA_000520055_1_1_2175	-	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQDIREESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNAEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDGALFPGRIMLANTCMWTYRSDECGYTGGAVADEFDNPTTDIRKDRCSKCMRGCEMRGMAVNFGGFLSINKLSQ*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0009	cloud	direct	high	698	0.999	GCA_000520055.1_02333
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2274868	2275209	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	10115	10456	GCA_000520055_1_1_2176	GCA_000520055_1_1_2176	-	5402276	.	PFAM:PF05939.12	minor-tail-protein	MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNPQLKTFQAVFRVTDESTRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYSDFSCTIEQVVN*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0010	cloud	direct	high	341	0.997	GCA_000520055.1_02334
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2275202	2278444	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	10449	13691	GCA_000520055_1_1_2177	GCA_000520055_1_1_2177	-	5402276	.	PFAM:PF06120.10	Tail-length-tape-measure-protein	MATLRELIIKISANSQSFQSELQRASRMGSEYYRTLQNGGRQAAAAAREQRRALAELNSQLTEIRGSAVGMAGAFAGAFATGHLISLADEWSSVNARLKQASQSSDEFSSSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVTEAISTGLKISGASTAEAGSVITQFSQALAQGVLRGEEFNSVNESGDRIVRALAAGMGVARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSSSITKVENAFMAWVGGANEASGVTKTLSGMLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAVSATAGLVTAARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNRNIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQARESARQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQYVLANPGWTTGDGFMINHLTSVKTVTEGLAQATEQLAVEQSRLAQMQEKAQSIQDVLAGLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRLPQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDPYQEARQRYISNALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALVGQNTELAKLKYQTAQGELKTLTEMQKQELLRNAALIDQQKIREQLRSREETLKNENAAARASNDAELLGYGQGERARERMRELQQIRDSFRQKDADLQSQYQTGDISEDFYRQALAQNAQYLSERLKEQEAFYAESDAQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNKVEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFLGSIGDWLGGAVANAKGGVYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMNGSAGLVYSPVYHIAIQNDGTNGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0011	cloud	direct	high	3242	1.0	GCA_000520055.1_02335
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2278495	2278776	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	13742	14023	GCA_000520055_1_1_2178	GCA_000520055_1_1_2178	-	5402276	.	PFAM:PF06223.11	tail-protein	MRLALRLGRTLSELGHSLSASEAMMWMEFDRVSPLGDERGDIRNAQIVKAVFGAQGMNVSLEDAMLCWGEDEDKVESDPFAALEDALSFAAMS*	phrogs_hmm	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0012	cloud	direct	high	281	0.996	GCA_000520055.1_02336
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2278800	2279174	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	14047	14421	GCA_000520055_1_1_2179	GCA_000520055_1_1_2179	-	5402276	.	pfam06222	Phage tail assembly chaperone. 	MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0013	cloud	direct	high	374	0.997	GCA_000520055.1_02337
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2279189	2279905	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	14436	15152	GCA_000520055_1_1_2180	GCA_000520055_1_1_2180	-	5402276	.	PFAM:PF16463.4	Tail-tube-protein	MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDALYAFKVLFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRMKGKPVSFVVPLAFVKNLDKTLTVNTGALLTMSVSANGGTPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCVVTDSAEKAQSVTSVECTVTVSAAAG*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0014	cloud	direct	high	716	0.999	GCA_000520055.1_02338
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2279972	2280316	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	15219	15563	GCA_000520055_1_1_2181	GCA_000520055_1_1_2181	-	5402276	.	PFAM:PF05657.10	tail-component	MTEADLYPHLAHLAGGQVYPYVVPLLDGRPSVALPWVVFSLISSVSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENRCYRATLEFQVTV*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0015	cloud	direct	high	344	0.997	GCA_000520055.1_02339
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2280313	2280759	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	15560	16006	GCA_000520055_1_1_2182	GCA_000520055_1_1_2182	-	5402276	.	PFAM:PF04883.11	tail-component	MIETLLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRAPVRRGKLRRNVVVLSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0016	cloud	direct	high	446	0.998	GCA_000520055.1_02340
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2280756	2281106	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	16003	16353	GCA_000520055_1_1_2183	GCA_000520055_1_1_2183	-	5402276	.	CDD:COG5614	Head-Tail-Connector-protein	MAISAGRLTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0017	cloud	direct	high	350	0.997	GCA_000520055.1_02341
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2281117	2281443	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	16364	16690	GCA_000520055_1_1_2184	GCA_000520055_1_1_2184	-	5402276	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREDLVQGELPFSVSVLIYDLRCPTVL*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0018	cloud	direct	high	326	0.997	GCA_000520055.1_02342
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2281440	2282663	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	16687	17910	GCA_000520055_1_1_2185	GCA_000520055_1_1_2185	-	5402276	.	PFAM:PF06074.11	portal-protein	MTERELSIIRALGEEFSTVLADLQRTFEGKMASQAQAFEEKLTSLSAVLQKHVTVDEVRPVLQAMVDDAVGAIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPAPRDGRDYDPEVLKQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVLDAVRALPAPQDGRDATALEILPAIDDQKSFPRGTYATHQGGLWRAYEKTHGMRGWECLVDGVADIDVSMTGERSFTVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTVTWGGSLWHCNSMTGDKPGEAHSSGWTLAAKRGRDAGGGK*	phrogs_hmm	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0019	cloud	direct	high	1223	0.999	GCA_000520055.1_02343
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2282660	2284024	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	17907	19271	GCA_000520055_1_1_2186	GCA_000520055_1_1_2186	-	5402276	.	PDB:3KDR_A	Portal-Protein	MWNLLRRTRKNQKSGRDVREVGWRSLFQAVAEPFAGAWQQGVKADPESVLSFHAVFSCISLISQDIAKMRLRLMQTDVQGIRREKRQGDTARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNSRGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLVGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGESVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASAGKTVSAQLPDGASDGNKAISETEHDAVKAMFRGILRK*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0020	cloud	direct	high	1364	0.999	GCA_000520055.1_02344
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2283970	2284191	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	19217	19438	GCA_000520055_1_1_2187	GCA_000520055_1_1_2187	-	5402276	.	.	hypothetical protein	MAKIRYLQGTHDARAGDIRDVAQPCAEVLVRLGKAEYITVRRPAGQKKKRDAEHGECGTFCGEPEKTRNQDVT*	.	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0021	cloud	direct	high	221	0.995	GCA_000520055.1_02345
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2284236	2286173	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	19483	21420	GCA_000520055_1_1_2188	GCA_000520055_1_1_2188	-	5402276	.	PDB:8ECN_B	Major-Capsid-Protein	MTLKRACSLLTVKSFSEDERVITGIASTPSPDRDGDILEPEGAEFGSTIPFLWQHDHSRPVGQCTVRRVREGLEITATLVKPVPDMPSQLAARLDEVWAAIKTGLVRGLSVGFRPHEYTYLDGGGLHFLRWELMEVSAVTVPANAECTIRTIKSYDRPFSAASGNRKPVVKIASSAGAAAQSTTVFHKEKTIMNIGEQIKSFENKRAALAASLEEIMNKAAEEGRTLDVEEEEHYDNTAAEIRQVDAHLKRLRELEAGKAATAQPVKQAGNGNVATVASAPVIRVEQKLDKGIGFARFAKSLAAAKGVRSEALEVARRQYPDDSRLHHVLKSAVGAGTTTDPQWAGSLSEYQEYAQDFIDYLRPQTIIGRFGQGGIPALRQVPFNIRVHAQVSGGAAGWVGEGKAKPLTKFDFESITFSHAKVSAIAVLTEELIRFSSPAADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDVKGTASTGNPDADAEAAFGQFVAANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGSFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTGDSTTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGSASGG*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0022	cloud	direct	high	1937	0.999	GCA_000520055.1_02346
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2286237	2287898	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	21484	23145	GCA_000520055_1_1_2189	GCA_000520055_1_1_2189	-	5402276	.	PFAM:PF03354.14	Large-Terminase	MIPVWSTACPDWAERLKKGLSIIPDPIYPDEAAHALAIFKQLRIVDAPGSPTFGESCAPWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIMMTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRVTDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQCKAEDMLREAIGGLASRPEGFVVYTTTQSNEPPAGVFRQKLQYARDVRDGKIHDPHFLPVIFEHPPEMVESGAHLLMENLAMVNPNLGYSVDEAFLYREYRKAREAGEETFRGFMSKHANVEIGLALRSDRWAGADFWEQQGRRVSLDDILQRADVVTVGIDGGGLDDLLGMYVTGRDRETREWLGWGHAWVHETAVVRRKSEASRFQDFVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQILDSLAEAGIPDESVVGISQGWKLGGAIKTTERKLAEGVLVHGDQPLMAWCVGNARVEPKGNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKAYEVFFI*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0023	cloud	direct	high	1661	0.999	GCA_000520055.1_02347
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2287895	2288458	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	23142	23705	GCA_000520055_1_1_2190	GCA_000520055_1_1_2190	-	5402276	.	CDD:COG3728	Small-Terminase	MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDETNPEMPPPAVMSPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKGDAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG*	hallmark_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0024	cloud	direct	high	563	0.998	GCA_000520055.1_02348
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2288748	2289113	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	23995	24360	GCA_000520055_1_1_2191	GCA_000520055_1_1_2191	-	5402276	.	COG1403	5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]. 	MAVLRTLPGRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNLWTLCTECHRQKSAREAAGGMPDPTLPEVSGGSGRADDIIGL*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0025	cloud	direct	high	365	0.997	GCA_000520055.1_02349
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2289155	2289382	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	24402	24629	GCA_000520055_1_1_2192	GCA_000520055_1_1_2192	+	5402276	.	PF13132.6	Domain of unknown function (DUF3950)	MSSKNRPRRTTTRNIRFPNQMIEQINIALDQKGSENFSAWVIESCRRELAADIKYARQLTIKKNDTQYALRWLFI*	hhsuite_tools	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0026	cloud	direct	high	227	0.996	GCA_000520055.1_02350
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2289745	2290212	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	24992	25459	GCA_000520055_1_1_2193	GCA_000520055_1_1_2193	-	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MNRVLCVVIIVLLVACGALSLGLNHYRDNAITYKAQRDKKARELELANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGVDNATGPRLADTAERDYFILRERLMTMQKQLEGAQDYIRTQCLN*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0027	cloud	direct	high	467	0.998	GCA_000520055.1_02351
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2290511	2291044	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	25758	26291	GCA_000520055_1_1_2194	GCA_000520055_1_1_2194	-	5402276	.	CDD:COG3772	lysozyme	MSRKLRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0028	shell	direct	high	533	0.998	GCA_000520055.1_02352
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2291049	2291264	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	26296	26511	GCA_000520055_1_1_2195	GCA_000520055_1_1_2195	-	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0029	persistent	direct	high	215	0.995	GCA_000520055.1_02353
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2291341	2291613	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	26588	26860	GCA_000520055_1_1_2196	GCA_000520055_1_1_2196	-	5402276	.	pfam05696	Protein of unknown function (DUF826). This family consists of several enterobacterial and siphoviral sequences of unknown function.	MSEITSLVTAEAVKEVLRSEEVLSALKQKLRHNLEARLDAEVDAILDELLGVQAEPPTEAGDTTAESGEVQPESPVADATEPQPESVMML*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0030	cloud	direct	high	272	0.996	GCA_000520055.1_02354
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2291654	2291833	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	26901	27080	GCA_000520055_1_1_2197	GCA_000520055_1_1_2197	-	5402276	.	pfam07125	Protein of unknown function (DUF1378). This family consists of hypothetical bacterial and phage proteins of around 59 residues in length. Bacterial members of this family seem to be specific to Enterobacteria. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	MTFLNQLMLYFCTVVCVLYLLSGGYRAMRDVWRRQIDKRAAEKISASQSAGSKPEEPLI*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0031	cloud	direct	high	179	0.994	GCA_000520055.1_02355
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2291969	2293906	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	27216	29153	GCA_000520055_1_1_2198	GCA_000520055_1_1_2198	-	5402276	.	PFAM:PF03629.17	tail-protein	MTFKHYDVVRAASPSDLAERLTQKLKEGWQPFGSPVAITPYTLMQAIAAEGDVTTPVAVTGNEGKAVAVSATSDPEYYFVVVLAGQSNGMSYGEGLPLPETYDRPDPRIKQLARRSTVTPGGAACKYNDIIPADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFIPANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALKKNPKNVLFAVVWMQGEFDFDGTPGNHAAQFGALVDKFRADLTDMAGQCVGGSAGGVPWICGDTTYFWKQKNESSYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIPGIGYYGSKWRDSSATWTSQDRASHFSSWARRGIISDRLATAILRHAGRVALNAGASSTVSEVRPSSSSGAEATGVTTLLSYLASESEGSLKVQGWSASGGRAEVVSDAEGTGGKAVKLTKEAGKSSWVLEYAAGNGAALLQKGGQIRCRFKVSGALAANQYVMAFYWPVSSLPQGVALTGDGGNNLLAAFYIQTDAKDLNVMYHNAKVATNNLKLGTFGAFDNEWHTLAFRFAGNNSLQVTPVIDGQDGTPFTLTQSPVSAFAADKLHVTDITRNATYPVLIDSIAVEVNSTDTAA*	phrogs_hmm	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0032	cloud	direct	high	1937	0.999	GCA_000520055.1_02356
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2294150	2294473	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	29397	29720	GCA_000520055_1_1_2199	GCA_000520055_1_1_2199	+	5402276	.	PRK09919	anti-adapter protein IraM; Provisional	MNWIVIDTVIQPACDISFSAIWCNIKLILWYQSDIFLPPGCIFTPTRTGVILNNKELPVTIYNVTPFNKNVWNLIKSSQECPANTGNITDKCFNHRCILEICPYGRK*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0033	cloud	direct	high	323	0.997	GCA_000520055.1_02357
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2294771	2295040	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	30018	30287	GCA_000520055_1_1_2200	GCA_000520055_1_1_2200	-	5402276	.	pfam02258	Shiga-like toxin beta subunit. This family represents the B subunit of shiga-like toxin (SLT or verotoxin) produced by some strains of E.coli associated with hemorrhagic colitis and hemolytic uremic syndrome. SLT's are composed of one enzymatic A subunit and five cell binding B subunits.	MKKMFMAVLFALVSVNAMAADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVTIKSSTCESGSGFAEVQFNND*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0034	cloud	direct	high	269	0.996	GCA_000520055.1_02359
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2295052	2296011	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	30299	31258	GCA_000520055_1_1_2201	GCA_000520055_1_1_2201	-	5402276	.	PFAM:PF00161.18	Shiga-toxin-subunit-A	MKCILFKWVLCLLLGFSSVSYSREFTIDFSTQQSYVSSLNSIRTEISTPLEHISQGTTSVSVINHTPPGSYFAVDIRGLDVYQARFDHLRLIIEQNNLYVAGFVNTATNTFYRFSDFTHISVPDVTTVSMTTDSSYTTLQRVAALERSGMQISRHSLVSSYLALMEFSGNTMTRDASRAVLRFVTVTAEALRFRQIQREFRQALSETAPVYTMTPGDVDLTLNWGRISNVLPEYRGEDGVRVGRISFNNISAILGTVAVILNCHHQGARSVRAVNEESQPECQITGDRPVIKINNTLWESNTAAAFLNRKSQFLYTTGK*	phrogs_hmm	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0035	cloud	direct	high	959	0.999	GCA_000520055.1_02360
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2296394	2297452	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	31641	32699	GCA_000520055_1_1_2202	GCA_000520055_1_1_2202	-	5402276	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MFNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWTGDEDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDAGYEAKGRALKQHVMAPLIAYFRDARAALGITAKQIVDATGKKNMVSHWFSASQWQLPNESDYLKLQSLFARVAEEKHQRGELEKPHHQLLETYTSLNRQYAELQSEYKHLRRYFGVTAQVPYTDVWTHKPVQYYPGKHPCEKPAEMLQQIISASSRPGDLVADFFMGSGSTVKAALALGRRATGVELETERFEQTVREVQDLASQNG*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0036	cloud	direct	high	1058	0.999	GCA_000520055.1_02364
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2298017	2298397	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	33264	33644	GCA_000520055_1_1_2203	GCA_000520055_1_1_2203	-	5402276	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRDIQMVLERWGAWAASGNTGVDYSPIAAGFKGLLPSTTKPRPACCDDDGLIIENCLARLKQKKPEEYSLLIAHYLLRISKRQIARTRKKSEKAIRIEMQIAEGFIDGCLSVLGVRLEMDDWLLKK*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0037	cloud	direct	high	380	0.997	GCA_000520055.1_02365
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2298416	2299405	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	33663	34652	GCA_000520055_1_1_2204	GCA_000520055_1_1_2204	-	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVRAVFRHEAVIRRAGGVECLESWLLREKGCQWPHSGWHSENMTTMRHAPGAIRLCWHCDNLLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLVRNDLADALPESAARKALRLPKPVLPSVTRESDLVPSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0038	shell	direct	high	989	0.999	GCA_000520055.1_02366
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2299457	2299714	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	34704	34961	GCA_000520055_1_1_2205	GCA_000520055_1_1_2205	-	5402276	.	.	hypothetical protein	MNNRTTTVSPEQLRRQAQEMLRCAEQMEKTSVAKDTLRKQLTPALRDLLQAKHRTQKAVDELVDCVAELEGQVSQFETLVKEFTA*	.	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0039	cloud	direct	high	257	0.996	GCA_000520055.1_02367
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2299711	2301111	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	34958	36358	GCA_000520055_1_1_2206	GCA_000520055_1_1_2206	-	5402276	.	PDB:3BH0_A	Helicase-ATPase	MTSQNTPAWRNDDLEGAVIGAFFLRGADPEVMDILATLSADVFSARQYRDIYAGICRQARVSGVIDPVLLCNEMPELAPVITDTGRKTWVKSSLEHYVAALRRNAALRDAEKTLTEALQNLRDAHTCEAAEDALKDAQNMMASLSTGKGVIQPVHIDDVLPEVVDRVECRNQGLEKSRALMTGIDELDAKTGGMEPGDLVFIAARPSMGKTELALDIIDKVTEQGHGVLLFTMEMANIQIGERMVSAAGGMPVSRLKSVARFEDEDWARFSQGVGRMTGRNIWMVDQANLTIDEICATTRHHRMKHPETALVVVDYLGLIKTRSTGRHDLAVGEISKGLKSLAKSGGFPLIALSQLSRGVESRPNKRPMNSDLKNSGEIEADADIILMLYRDEVYNPETQARGIAEINITKQRNGTLGTIYRRFHNGHFLPVDQESARVLSTPMTPGNPRRYSNNRMSGSKTERLF*	rep_hall_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0040	cloud	direct	high	1400	0.999	GCA_000520055.1_02368
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2301108	2301986	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	36355	37233	GCA_000520055_1_1_2207	GCA_000520055_1_1_2207	-	5402276	.	PDB:4M4W_K	Replicative-helicase	MMTFNLREQQTRLQARMDELRAEIAFAQKGEKPWPYRSCWMREGRGCCEKHGEYHTHILVWSDRNGEDREKISCCPDCLIAEANDLTMELSSLKAEELTDNAGIALRFRDCEFDNYLEVNPDAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHLAVSMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADDVIEHYASLDLLIIDEVGVQFGSAAEMAILQEIINARYEGILPTILISNLSPEELWAFISPRIADRITNGGRNWLSFNWPSYRSRIGGVAA*	rep_hall_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0041	cloud	direct	high	878	0.999	GCA_000520055.1_02369
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2301997	2302905	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	37244	38152	GCA_000520055_1_1_2208	GCA_000520055_1_1_2208	-	5402276	.	PFAM:PF06926.10	replisome-organiser-protein	MRPSDLLLDFGHPVAYYPGLVKYMGSPHAVIFFGQIFYWQDKAHAAEGVHKTREEIQHETGLTFEQQAVARKHLVSRGILVETNKRLEHKMFYRIDCERLNEIINENNQFSRNGETRFRETVKPNFAEEGKPSPRTRETTRRGEGKTNFDLTENTTEITSENTTESKNTIGASADASAPARSARQEYSPEFEQAWQEYPKRAGGNSKSAAFKAWKARIREGVTPETMLNGVKRYAAWVRVSGNTGTQFVKQASTFFGPDRHFEDFWQQPAAPGGGRQRQVDVLAGLGAMSDKFGKSSDKLTF*	rep_hall_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0042	cloud	direct	high	908	0.999	GCA_000520055.1_02370
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2302892	2303125	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	38139	38372	GCA_000520055_1_1_2209	GCA_000520055_1_1_2209	-	5402276	.	.	hypothetical protein	MIRRVVNSLYHRYNRCPRVGQWFTTSNGHVLRVCLVNTESQMVVCQVQGRTHTLSYPLVAFQSGKMFKRLGGGYASV*	.	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0043	cloud	direct	high	233	0.996	GCA_000520055.1_02371
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2303122	2303784	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	38369	39031	GCA_000520055_1_1_2210	GCA_000520055_1_1_2210	-	5402276	.	pfam10554	Ash protein family. This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.	MIISRPNIDSAISGRYTVSAPYKAGAGGRSPELLEAIYDAPASFLSSMLAHARIMVGWAGEPKGSPVSLSAGTANPVQFTTHEFRSSGGGSFSLLKEAAIMATVPTSPYLKIEVVNGKAVIFSLHVACHFKRMHQNIVDKIEYLNCSREFFTRNFIPGTYHIYGDSLRGYYITLDGLMMLQLGLSLRTMRYYESCIEAFHEAEISLSHTAFRRNQWEVRP*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0044	cloud	direct	high	662	0.998	GCA_000520055.1_02372
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2303893	2304600	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	39140	39847	GCA_000520055_1_1_2211	GCA_000520055_1_1_2211	-	5402276	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNTAIFNDKASMTSVEIAELVGSQHKDVKRSIERLMGKGVIRSAPMANFEIINNLGLKRNVAAYVFEGEQGKRDSIIVVAQICPEFTARLVDRWRELEEQIRKPMSEIEMVAAMALEAVRQQKRITQVEEKVIHVAETVEQIKKGTIREGYAGYRQLKAKTGLSDDKCCNLVNAYQIPTDTHEFMTPDGLLSRRAIVAVEPFMAAFYRVMEEAEPRGTRWYHPKMGLFQVIGWQR*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0045	cloud	direct	high	707	0.999	GCA_000520055.1_02375
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2304682	2304939	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	39929	40186	GCA_000520055_1_1_2212	GCA_000520055_1_1_2212	-	5402276	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MIKLNDYDMLRKLIPQNAIARYIGVTPQAVNLWFSKNSVPSRFVLRVCELVEWKVTPHGLRPDLYPYPEDGIPDSLRKSNGITRD*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0046	cloud	direct	high	257	0.996	GCA_000520055.1_02376
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2305072	2305761	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	40319	41008	GCA_000520055_1_1_2213	GCA_000520055_1_1_2213	+	5402276	.	PDB:2FJR_A	Repressor-protein-CI	MKNVKSTENRIAMMLKTKGWSQAELARKLGVSAQSVQYWTTGKTFPRSDKLAQLSVISGYPQSWFLGEDASSTFSSAEKHHTREDSVVFNVLDVEFSCGDGTHVRGDLIDVVRSIELDPEYARRLVGNRAFKNIEIGNARGDSMAPTISPGDLLFLDKTVTYFDGDGIYAFCFDGECYVKRLQKIGSKIMVLSDNPNYQPWSIEKEGMALLYIQSKVISSVPFNINRFG*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0047	cloud	direct	high	689	0.999	GCA_000520055.1_02377
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2305909	2306610	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	41156	41857	GCA_000520055_1_1_2214	GCA_000520055_1_1_2214	+	5402276	.	PRK09706	transcriptional repressor DicA; Reviewed	MEALQTTPKTCSLNTYNKVLCDDLDLDSFALTIANLLSAVRTFNLLDDTRLKEVGFDVLEFTHEYALAIASTKQQHSIRSGNKIACIRTKREACGLTTTELARLLDLDEEIILQWESGEFEPTISMLIPLANVLGCDPLSLLSEKNSESAIRVNTTEVHAESIGARIKSARTKLGLTESDLARMIHTYSDPINDWECGICEVPADHIVPLASALNCDLMWLLTGKSEAKEQQQ*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0048	cloud	direct	high	701	0.999	GCA_000520055.1_02378
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2306607	2306807	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	41854	42054	GCA_000520055_1_1_2215	GCA_000520055_1_1_2215	+	5402276	.	PFAM:PF10078.8	CII-like-regulator	MTGNIHDKYEGLCLAPDSFANNIHNLLCAVIVLQMSDNDAIKRTGDEVLEFARCYAEAAAEKELSS*	phrogs_hmm	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0049	cloud	direct	high	200	0.995	GCA_000520055.1_02379
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2307006	2307206	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	42253	42453	GCA_000520055_1_1_2216	GCA_000520055_1_1_2216	+	5402276	.	.	hypothetical protein	MHQKTAEHEQTRVLLTIKNGKVILIRHVHDDEFVEIFQHSCLLQKRQDMTLLHQQMKMRNKFHAIR*	.	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0050	cloud	direct	high	200	0.995	GCA_000520055.1_02381
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2307193	2307765	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	42440	43012	GCA_000520055_1_1_2217	GCA_000520055_1_1_2217	+	5402276	.	PF17345.2	Family of unknown function (DUF5375)	MQYAEFQAEATANGIQTGSMTIDYHDAIRRLDAGEFDTPNVRGLRILQCLAQADEAGLLGKLPVEMKVAQWRWLYVTTFINEEEDKNGTIDVPNEHGTTDRAVIYNGKHGVMTIYPGPIRFALQQYIEWNLIQKYGEAEGMGRALFLYQKMLITYPDKGFIVSDMGREGLELLLDEMINDLNTHGMPEGQ*	hhsuite_tools	hypothetical_protein	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0051	cloud	direct	high	572	0.998	GCA_000520055.1_02382
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2308135	2308962	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	43382	44209	GCA_000520055_1_1_2218	GCA_000520055_1_1_2218	+	5402276	.	CDD:cd03405	High-frequency-of-lysogenization-C-protein	MKKIIFALAIVLPTIGLVGCDRVEPGNVGIKVNKLGDDKGVGEVVGVGRYWTGWNTEVYIFPTFKQMKTYDEPFSFQMSDGTTIGYHIGVAYKVDPSKVTTVFQTYRKGVDDITATDLRQKIADALNRLASKMTTDKFIDGGKSELLDAALKDIQEEMTPIGVQVMSLSYVGKPEYPPTVIDSINAKVTANQKTLQREQEVKQREAEANMLRAEAAGQADAIRTKALAEADAIRLRGEALRQNPGVMELEAINKWNGTLPQYMTSGANTPFIQIK*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0052	cloud	direct	high	827	0.999	GCA_000520055.1_02383
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2309003	2309374	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	44250	44621	GCA_000520055_1_1_2219	GCA_000520055_1_1_2219	+	5402276	.	pfam17400	Family of unknown function (DUF5406). This is a family of unknown function found in Bacteria.	MNNQNTQPQIMNYDPNLTSCGRMAKQTVRLTFGLWEYRETFEVTVGGNLTGLDVINCAIESLYATLPYEEVLDERTGKTDIMATINIGELICQDEDLSGELWLAGMLISAEIISIEPATNIRL*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0053	cloud	direct	high	371	0.997	GCA_000520055.1_02384
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2309406	2309522	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	44653	44769	GCA_000520055_1_1_2220	GCA_000520055_1_1_2220	+	5402276	.	PF13973.6	Domain of unknown function (DUF4222)	MFALINQGQLYTDSAGYPVKIVRCINNTVLYRRCEANV*	hhsuite_tools	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0054	cloud	direct	high	116	0.991	GCA_000520055.1_02385
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2309566	2309820	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	44813	45067	GCA_000520055_1_1_2221	GCA_000520055_1_1_2221	+	5402276	.	pfam06806	Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	MQTIIYQITPSKWCTERVLIASTGLKPGTIERARRKSWMQGKEYRHYAVEGDPGHYSECLYNIEEIMRWIENQKQPGAKNASSG*	mmseqs_cdd	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0055	cloud	direct	high	254	0.996	GCA_000520055.1_02386
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2309854	2311140	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	45101	46387	GCA_000520055_1_1_2222	GCA_000520055_1_1_2222	+	5402276	.	PDB:1Z19_B	Integrase	MSNASYPTGVENHGGSLRIWFHYNGKRVRENLGVPDTAKNRKIAGELRTSVCFAIRMGSFDYAAQFPNSPNLKHFGLGKREITVKALSEKWLDLKKIEIGSNAFSRYQSVVRNMLPRIGEKRLASSVTKEDLLFIRKDLLTGYHNLSNGKTTPIKGRSVVTVNYYMTTIAGMFQFAADNGYIVSNPFNGLTPLKRSRTEPDPLTRDEFIRFIDACHHQQTKNLWSLAVYTGIRHGELISLAWEDIDLKAKTMTIRRNYTKLGEFTLPKTEAGTDRVIHLVQPAVDALKSQAEMTRLGPQYQIDVKLREFGRTARHECTFVFNPQLVKKCQQVGHHYKADSIRDSWASALRRAGLRHRKAYQSRHTYACWALSAGANPSFIANQMGHANAQMVFNVYGAWMKDNNIGQIELLNKQLTESVPYMPHRARL*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0056	cloud	direct	high	1286	0.999	GCA_000520055.1_02387
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2311106	2311921	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	46353	47168	GCA_000520055_1_1_2223	GCA_000520055_1_1_2223	+	5402276	.	1ZTV_B	hypothetical protein	MSHTCPIEPDSEIISLNISCFSGSCRHINCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF*	hhsuite_tools	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0057	persistent	direct	moderate	725	0.888	GCA_000520055.1_02388
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2311974	2312369	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	47221	47616	GCA_000520055_1_1_2224	GCA_000520055_1_1_2224	+	5402276	.	COG3788	Uncharacterized membrane protein YecN, MAPEG domain [Function unknown]. 	MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR*	mmseqs_cdd	nonviral_gene	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0058	persistent	direct	high	395	0.997	GCA_000520055.1_02389
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	CDS	2312410	2313153	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	47657	48400	GCA_000520055_1_1_2225	GCA_000520055_1_1_2225	+	5402276	.	PDB:2VDW_C	Capping-Enzyme-D1	MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPSTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHNAGFEHSELWFQCFNFGSLVALKAEDAA*	common_virus_hmm	common_virus	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_CDS_0059	persistent	direct	high	743	0.999	GCA_000520055.1_02390
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2418598	2419158	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	1	561	GCA_000520055_1_1_2336	GCA_000520055_1_1_2336	-	5402276	.	3OTV_C	PROBABLE CONSERVED TRANSMEMBRANE PROTEIN	MLYRLGWPKGEITRKIEAMLNSSTVSTTIERGSVRSNRPDLPPVDYAQPELPPADYTQSALLRLSNNKSPVLGNVIGKGGNAVVYEDMENTTKVLKMFTISQSHEEVTSEVRCFNQYYGAGSAEKIYGDNRDIIGIRMDKINGESLLNISSLPAQAEHAIYDMFERLEKKEFFLLIQQKQMFYMIV*	hhsuite_tools	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0001	cloud	direct	high	560	0.998	GCA_000520055.1_02509
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2420020	2421000	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	1423	2403	GCA_000520055_1_1_2337	GCA_000520055_1_1_2337	-	5402276	.	PRK15382	NleB family type III secretion system effector arginine glycosyltransferase. 	MLSPIRTTFHNSVNIVQSSPCQTVSFAGKEYELKVIDEKTPILFQWFEPNPERYKKDEVPIVNTKQHPYLDNVTNAARIESDRMIGIFVDGDFSVNQKTAFSKLERDFENVMIIYREDVDFSMYDRKLSDIYHDIICEQRLRTEDKRDEYLLNLLEKELREISKAQDSLISMYAKKRNHAWFDFFRNLALLKAGEIFRCTYNTKNHGISFGEGCIYLDMDMILTGKLGTIYAPDGISMHVDRRNDSVNIENSAIIVNRSNHPALLEGLSFMHSKVDAHPYYDGLGKGVKKYFNFTPLHNYNHFCDFIEFNHPNIIMNTSQYTCSSW*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0002	cloud	direct	high	980	0.999	GCA_000520055.1_02511
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2421177	2421446	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	2580	2849	GCA_000520055_1_1_2338	GCA_000520055_1_1_2338	-	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQRLCGCGKHDGREHVQLLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0003	cloud	direct	high	269	0.996	GCA_000520055.1_02512
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2421448	2422653	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	2851	4056	GCA_000520055_1_1_2339	GCA_000520055_1_1_2339	-	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFQHLQVRFGDGPWQDVKGLDEVGCDTGRTGE*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0004	cloud	direct	high	1205	0.999	GCA_000520055.1_02513
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2422718	2423317	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	4121	4720	GCA_000520055_1_1_2340	GCA_000520055_1_1_2340	-	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHASTNVPGSDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0005	shell	direct	high	599	0.998	GCA_000520055.1_02514
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2423384	2426860	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	4787	8263	GCA_000520055_1_1_2341	GCA_000520055_1_1_2341	-	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGKGHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLVETTSKGDRNPTSVRLLIQLERGGKWMTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGASFEPQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAVPATIELTPGYFQITAVPRLAVYDPTVQFEFWFSETKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAFVEVSGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTSITETRNEITQTVSKTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGTITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDVQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0006	cloud	direct	high	3476	1.0	GCA_000520055.1_02515
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2427110	2427691	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	8513	9094	GCA_000520055_1_1_2342	GCA_000520055_1_1_2342	-	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYSATDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0007	cloud	direct	high	581	0.998	GCA_000520055.1_02516
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2427688	2428431	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	9091	9834	GCA_000520055_1_1_2343	GCA_000520055_1_1_2343	-	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTQTESAILAHARRCAPAESCGFVISTPEGEWYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALSWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQAGDILLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0008	persistent	direct	high	743	0.999	GCA_000520055.1_02517
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2428442	2429140	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	9845	10543	GCA_000520055_1_1_2344	GCA_000520055_1_1_2344	-	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQDIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEAVTWQGREYQAYPIDGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELRDRWVVEQMSELTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCEMRGMVANFGGFLSINKLSQ*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0009	cloud	direct	high	698	0.999	GCA_000520055.1_02518
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2429140	2429469	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	10543	10872	GCA_000520055_1_1_2345	GCA_000520055_1_1_2345	-	5402276	.	PFAM:PF05939.12	minor-tail-protein	MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVTLSVTREEARHLEAFLAEHGGWKAFLWTPPYAWRQIKVTCAAWSSRVRMLRVEFSAEFKQVVN*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0010	shell	direct	high	329	0.997	GCA_000520055.1_02519
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2429466	2432045	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	10869	13448	GCA_000520055_1_1_2346	GCA_000520055_1_1_2346	-	5402276	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MSQPVGDLVIDLSLDAVRFDEQMSRVRRHFSGLETDARKTAGVVEQNLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIATQLAGGQNPWLILLQQGGQVKDSFGGMIPMFRGLAGAITLPMVGVTSLAVATGALAYAWYQGDSTLSAFNKTLVLSGNQSGLTADRMLTLSRAGQAAGLTFNQASESLAALVNAGVRGGAQFDAINQSVARFASASGVEVDKVAEAFGKLTTDPTSGLMAMARQFRNVMAEQIAYVAQLQRSGDEAGALQAANDAATKGFDEQIRRLKENMGTLETWADKTGKAFKSMWDAILDIGRPESSADMLASAQKAFDEADKKWQWYQSRSQRRGKTSSFRANLQGAWDDRENARLGLAAATLQSDMEKAGELATRDRAERDASQLKYTGEAQKAYERLLTPLEKYTNRQEELNKALKDGKILQADYNTLMAAAKKDYESTLKKPKSSGVKVSAGERQEDLTHAALLALETELRTLEKHSGANEKISQQRRDLWKAESQFAVLEEAAQRRQLSAQEKSLLAHEQETLEYKRQLADLGDKVEYQKRLNELAQQAARFEQQQGAKQAAISAKARGLTDRQAQRESEEQRLRDVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGLKSGWGEWAESATDSFSQVKSVATQTFDGIAQNMAAMLTGSEQNWRGFTRSVLSMLTEIFLKQAMVGIVGSIGSAMGGAFGGGASASTGTAIQAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYAEGGYVGGAGSPAQMRRAEGISFNQNNHVVIQNDGTNGQAGPQLMKAVYDMARKGAQDEIQAQMRDGGVFSGGRR*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0011	shell	direct	high	2579	1.0	GCA_000520055.1_02520
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2432026	2432439	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	13429	13842	GCA_000520055_1_1_2347	GCA_000520055_1_1_2347	-	5402276	.	PFAM:PF06223.11	Minor-tail-protein-	MGRPDWRAMLAGMTSTEYADWRHFYRTHYFLDTQLDMHFSGLTYAVLSLFFCDPDMHPSDFSLLAPRREEAQTEMPDEEKMLMQKAAGLAGGVRFGGDGGREILSSADVADVSEDDVALMMASAGISGGVRYVPAGW*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0012	cloud	direct	high	413	0.998	GCA_000520055.1_02521
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2432466	2432897	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	13869	14300	GCA_000520055_1_1_2348	GCA_000520055_1_1_2348	-	5402276	.	PFAM:PF06894.10	tail-assembly-chaperone	MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEQAESSGNLQVSVEDLVRTGAFLVAMSLWHNHPQKTASPSMNEAVMQIEQEVLTTWPADAIARAEDVVLRLSGMSGAVHADTDSTEVAKNNALTDDDFSAGKSSTAS*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0013	cloud	direct	high	431	0.998	GCA_000520055.1_02522
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2432911	2433663	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	14314	15066	GCA_000520055_1_1_2349	GCA_000520055_1_1_2349	-	5402276	.	PFAM:PF16463.4	tail-tube-protein	MSTPNPLEPVKGAGTTLWVYNGQGDAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0014	cloud	direct	high	752	0.999	GCA_000520055.1_02523
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2433671	2434066	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	15074	15469	GCA_000520055_1_1_2350	GCA_000520055_1_1_2350	-	5402276	.	PDB:3FZ2_G	Minor-tail-protein-	MKHTDIRAAVLDALELHEHGATLFDGRPVVFDEEDFPAVAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDSWMESRIYPAMTAIPALADLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0015	shell	direct	high	395	0.997	GCA_000520055.1_02524
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2434063	2434596	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	15466	15999	GCA_000520055_1_1_2351	GCA_000520055_1_1_2351	-	5402276	.	PFAM:PF06763.10	minor-tail-protein	MAIKGLEQAIDNLSRVRKNAIPAASAMTINRVATTAINQSSSQVARETRVRRKLVKERSRLKRATVRNPNARIIVNRGDLPVIKLGIRMSGRRPDSILKAGQHRYQRAFIQRLKNGRWHVMQRVVGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPGELAYALKQQLRIAIKR*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0016	cloud	direct	high	533	0.998	GCA_000520055.1_02525
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2434612	2434965	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	16015	16368	GCA_000520055_1_1_2352	GCA_000520055_1_1_2352	-	5402276	.	CDD:pfam05354	Head-Tail-Connector-Protein	MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGGEVQGVFDDPESLGFAGSGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0017	cloud	direct	high	353	0.997	GCA_000520055.1_02526
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2434958	2435332	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	16361	16735	GCA_000520055_1_1_2353	GCA_000520055_1_1_2353	-	5402276	.	PFAM:PF14000.5	DNA-packaging-protein	MATKEQNLKRLDELALILGREPDISGSAAEIAQRVAEWEEEIQSSGEDVQVGDTVIRERETAAHDVREDTSGALTRIRVLTCLHLCGIDGETGESVEIADVGRVILIMSSDAKTHVDGGMAVYA*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0018	cloud	direct	high	374	0.997	GCA_000520055.1_02527
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2435384	2436412	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	16787	17815	GCA_000520055_1_1_2354	GCA_000520055_1_1_2354	-	5402276	.	PDB:3BQW_A	Capsid-protein	MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEEHAIVQVEEIQAVNAVLYGKYTMEGDQFEKIEVDFGRSTKNNITQGSGKEWSKQDRDTFDPTHDLDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYIAEDGIEKRYLPEGMLVLGNTAADGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0019	cloud	direct	high	1028	0.999	GCA_000520055.1_02528
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2436470	2436817	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	17873	18220	GCA_000520055_1_1_2355	GCA_000520055_1_1_2355	-	5402276	.	pfam02924	Bacteriophage lambda head decoration protein D. 	MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDEASGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPESVDEHKKANAFAGSALSHAALP*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0020	cloud	direct	high	347	0.997	GCA_000520055.1_02529
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2436854	2438359	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	18257	19762	GCA_000520055_1_1_2356	GCA_000520055_1_1_2356	-	5402276	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLADELVNASDAISVMATALNSNVRGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLATMLAGQQGMSVAQARAILAAAAPQQPVASTQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAASPQADAGPSLRDQIMALDEAKGAEAQAEQLAACPGMTVESARAVLAAGSGKAEPVSASTTALFERIMANHSPAAVQGGVPQTSADGDADVKMLMAMP*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0021	cloud	direct	high	1505	0.999	GCA_000520055.1_02530
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2438349	2439941	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	19752	21344	GCA_000520055_1_1_2357	GCA_000520055_1_1_2357	-	5402276	.	CDD:COG5511	Major-Capsid-protein	MKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMSGEIDVEEKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGMGNRFLRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQEQKDNPLINILEKFSSWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIAARLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0022	cloud	direct	high	1592	0.999	GCA_000520055.1_02531
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2439938	2440144	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	21341	21547	GCA_000520055_1_1_2358	GCA_000520055_1_1_2358	-	5402276	.	PDB:2L6Q_A	Head-Tail-Connector-Protein	MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0023	cloud	direct	high	206	0.995	GCA_000520055.1_02532
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2440128	2442056	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	21531	23459	GCA_000520055_1_1_2359	GCA_000520055_1_1_2359	-	5402276	.	PFAM:PF05876.11	Large-Terminase	MNISEQQLNNMMAAVSVALQPLVRVVPMTAVEWADQNYYLPKESSYGEGEWKTLPFQIAIMNCMGNDQVRTVNLIKSARVGYTKMLLGVVGYFIEHKSRNSLLFQPTDSAAEDFMKSHVEATIRNVPCLKDLSPWLGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGTCQIEKAANESAHFMRFYVPCPHCGEAQYLKFGDESTPFGLKWEKDSPESVFYLCEHHGCVIHQSELDQSNGRWICENTGMWTRDGLTFFSARGDEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVVHYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDAAINKKYCHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0024	cloud	direct	high	1928	0.999	GCA_000520055.1_02533
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2442028	2442537	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	23431	23940	GCA_000520055_1_1_2360	GCA_000520055_1_1_2360	-	5402276	.	CDD:COG4220	terminase	MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE*	hallmark_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0025	cloud	direct	high	509	0.998	GCA_000520055.1_02534
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2443238	2443552	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	24641	24955	GCA_000520055_1_1_2361	GCA_000520055_1_1_2361	-	5402276	.	pfam06069	PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	MLHDHVAECLEKKGLYRRAAERWAKVMVQLSDDQKRKVAAQKRAECLRKARRTPVSPVNLTEIKQAVNRLHSELGMGFEERRVFRRYKGTGEQNTSGNARSKKC*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0026	cloud	direct	high	314	0.997	GCA_000520055.1_02535
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2444018	2444542	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	25421	25945	GCA_000520055_1_1_2362	GCA_000520055_1_1_2362	-	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGALSLGLNHYRDNAITYKAQRDKKASELKLANVTITDMQVRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINANCPGSLRKAPITSGVDNATGPRLADTAERDYFILRERLMAMQKQLEGAQEYIRTQCIP*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0027	cloud	direct	moderate	468	0.891	GCA_000520055.1_02536
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2444487	2444600	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	25890	26003	GCA_000520055_1_1_2363	GCA_000520055_1_1_2363	-	5402276	.	.	hypothetical protein	MKGIEVETPASLDLTRAAAFAIRIVAIAVLVWAIRWW*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0028	cloud	direct	high	113	0.991	GCA_000520055.1_02537
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2444822	2445355	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	26225	26758	GCA_000520055_1_1_2364	GCA_000520055_1_1_2364	-	5402276	.	CDD:COG3772	lysozyme	MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0029	shell	direct	high	533	0.998	GCA_000520055.1_02538
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2445406	2445750	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	26809	27153	GCA_000520055_1_1_2365	GCA_000520055_1_1_2365	-	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0030	cloud	direct	high	344	0.997	GCA_000520055.1_02539
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2445755	2445970	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	27158	27373	GCA_000520055_1_1_2366	GCA_000520055_1_1_2366	-	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0031	persistent	direct	high	215	0.995	GCA_000520055.1_02540
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2446123	2447973	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	27526	29376	GCA_000520055_1_1_2367	GCA_000520055_1_1_2367	-	5402276	.	6YP6_A	NanS-p	MTFKHYDVVRAASPSDLAEKLTHKLKEGWQPYGGPVAITPYTLMQAVAIEGEPQVGPSSEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLIARTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLMLEINAPAA*	hhsuite_tools	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0032	cloud	direct	high	1850	0.999	GCA_000520055.1_02541
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2448214	2448732	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	29617	30135	GCA_000520055_1_1_2368	GCA_000520055_1_1_2368	+	5402276	.	.	hypothetical protein	MFACTFFFLHGAGCLPVNSVSAPESAIITYTCLLIAPPHRGIHHAVVFLINSKQKNQALCRLFLFITGHSNTTMPQTSTPSASTDMILLVKSTITTRNSRSAATARRSFTVTGDSPDEDPEHRQSLPAPCALPAQFRRLPPQWPPPHPAHLPLHAYRVSHPQSHVTPHDDQF*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0033	cloud	direct	high	518	0.998	GCA_000520055.1_02544
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2448545	2448976	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	29948	30379	GCA_000520055_1_1_2369	GCA_000520055_1_1_2369	-	5402276	.	cd07176	tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	MFGIFKKKTRRAAAEIKKFEKRDLAQAVINAAYLVAYADGECEASEKAKIEQVLRNQPALSAFTSEINAISATIIGQLDTNFKIGRRAALREIEDVKHDTREAEDVLDVAVAIAEADGEIEPEERKVLEEIAGVLGLRLENHQ*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0034	cloud	direct	high	431	0.998	GCA_000520055.1_02545
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2449427	2450014	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	30830	31417	GCA_000520055_1_1_2370	GCA_000520055_1_1_2370	-	5402276	.	PRK09978	DNA-binding transcriptional regulator GadX; Provisional	MHYGKVKIVDISESVVSQYLESQHKLTRTRLTDIPLYLLLEPNNPALAAALITSQGFSGEVTDMFLMMACLSLFETDERMSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLKTKLKNEGGMFSRLLLEERMRVAVNMLCSRHGYGQAVAEKCGYSSWSYFISVFHRYYGFPPDRYVSRQGLDY*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0035	cloud	direct	high	587	0.998	GCA_000520055.1_02548
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2450278	2450475	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	31681	31878	GCA_000520055_1_1_2371	GCA_000520055_1_1_2371	-	5402276	.	PF08221.11	RNA polymerase III subunit RPC82 helix-turn-helix domain	MLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQCGCYRRLQS*	hhsuite_tools	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0036	cloud	direct	high	197	0.995	GCA_000520055.1_02549
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2450700	2451254	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	32103	32657	GCA_000520055_1_1_2372	GCA_000520055_1_1_2372	-	5402276	.	PFAM:PF06576.10	anti-termination-protein-Q-like	MIYPEITGKSGEHLRLKTLESVWIQGKLRMWGRWSYIGDGKTGNMFNQLLTSKKLTKTAINEALRRMKKAGLDKPELEAFLRDMINGNQKSWLAHCTDSEALIIDRVIGEVLAGYPGLLNVLSQRYVGRGMTKRKMAELLNDAHPEWSLRTCERRIEHWLKVAEFILYKPMVMAFGIEKKVIAF*	phrogs_hmm	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0037	cloud	direct	high	554	0.998	GCA_000520055.1_02550
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2451263	2451622	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	32666	33025	GCA_000520055_1_1_2373	GCA_000520055_1_1_2373	-	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MRIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLNLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDEINIVRGQLVSGGRLGVKIYKIESE*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0038	cloud	direct	high	359	0.997	GCA_000520055.1_02551
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2451635	2452684	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	33038	34087	GCA_000520055_1_1_2374	GCA_000520055_1_1_2374	-	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRVLLRPVLVPELGLVVLKPGRESLPVFHRGRVLVEPEPKNMRALPSGAVPAVRQPLAEDKSLLPFFSDERVIRAAGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHSYGAGAMVLCWHCDNQLRDQTSESLEQLTQQNLTAWMIDVIRHVMNGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKIRSVYRESDIIPGEQTATSILKQRTKNIALPPHTHQQQNPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0039	shell	direct	high	1049	0.999	GCA_000520055.1_02552
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2452686	2452958	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	34089	34361	GCA_000520055_1_1_2375	GCA_000520055_1_1_2375	-	5402276	.	.	hypothetical protein	MTQHIKSHNSEADPEIKQGRRFRAPQYGWFHYLFCTIDEADMLQEAYLRRGVRVERSLNADRLTWTVSVYLPVRAHLPRTHACYRQRVWR*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0040	cloud	direct	high	272	0.996	GCA_000520055.1_02553
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2453080	2453424	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	34483	34827	GCA_000520055_1_1_2376	GCA_000520055_1_1_2376	-	5402276	.	COG3111	Predicted periplasmic protein YdeI with OB-fold, BOF family [Function unknown]. 	MKKVLIAALISGVSFGAFAQQGGFQGPEAERSTVAQAKELKDDAWVILEGSIVKKVGDERYEFRDNSGTIVTDIDDSVWAGQNVSPKDKVRIEGEIDKDLSSVEVDVKALKLLK*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0041	cloud	direct	high	344	0.997	GCA_000520055.1_02554
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2453544	2453756	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	34947	35159	GCA_000520055_1_1_2377	GCA_000520055_1_1_2377	-	5402276	.	pfam01848	Hok/gef family. 	MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0042	shell	direct	high	212	0.995	GCA_000520055.1_02555
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2453990	2454547	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	35393	35950	GCA_000520055_1_1_2378	GCA_000520055_1_1_2378	-	5402276	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSTITRERAEIKSYITGFLSDSAHDNKSSDSLLANVFRIALASLEAEPIAMVVPDEMDLLTCHLDGVTKTYADGWNACRVAMLQAGNFRENKNSSTNNFREISETSTRSPITLDGWISCTERMPEKSQNVLISMNIDSEAGPLIYSARYLGGTFRRGGIAVSPGNDLRQATHWMSLPEPPQEVNQ*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0043	cloud	direct	high	557	0.998	GCA_000520055.1_02557
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2454895	2455206	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	36298	36609	GCA_000520055_1_1_2379	GCA_000520055_1_1_2379	-	5402276	.	.	hypothetical protein	MSKIKEMPVVRDGYGYWTHPEYEKFCDGREYISTEEFNAWMEENNLQYVLCFRDEGCADLDACDADISAWEPERPEGDGWFIGSIHDTEDGPVCVWLRNKAEA*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0044	cloud	direct	high	311	0.997	GCA_000520055.1_02558
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2455199	2455426	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	36602	36829	GCA_000520055_1_1_2380	GCA_000520055_1_1_2380	-	5402276	.	.	hypothetical protein	MKILYQDYGPVGQVVISSTVMEFRKHNRVVDAVLLTCPGISASRAGVFIMKTKLYGSKAWIKKAYRVALQEVNSE*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0045	cloud	direct	high	227	0.996	GCA_000520055.1_02559
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2455737	2456453	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	37140	37856	GCA_000520055_1_1_2381	GCA_000520055_1_1_2381	-	5402276	.	PFAM:PF03965.15	transcriptional-regulator	METVFDALKALKKASSQVVASRLGISREDAVNELWKLKRRGEADNKGSMWWLIQAGESEPVSPVPKVTAQMLTEAIEHHGPQTADELALMFGITSRRANSSLAMAISKGRLIRVNQGGKFRYCIPGADLPAEPKAASIAETDGKAFPQPAGVALPVGEAETQEEIKTESVAVTVQSQPSFTRKHPDGLILPSLHVANRELRRAKGQVQKWERVCAALRELNKCRDILRDITATREQQR*	phrogs_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0046	cloud	direct	high	716	0.999	GCA_000520055.1_02561
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2456475	2457221	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	37878	38624	GCA_000520055_1_1_2382	GCA_000520055_1_1_2382	-	5402276	.	PDB:4M4W_K	Replicative-helicase	MKNIAAAGVLERIRRLAPPASVPPYRTVEEWREWQLAEGRKRSEEINRQNHQLRVEKILNRSGIQPLHSKCSFANYQVQNDGQKYALSQAKSIADELMTGCTNFVFSGKTGTGKNHLAAAMGNRLMAKGRSVIIVTVSDVMSVLHDSYDNGKSGEKFLQELCSVDLLVLDEIGVQRETKNEQVVLHQIIDRRTASLCSVGMLTNLNHAAMSTLLGERIMDRMTMNGGRWVTFNWDSWRPNVSNQRVVK*	rep_hall_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0047	cloud	direct	high	746	0.999	GCA_000520055.1_02562
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2457228	2458334	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	38631	39737	GCA_000520055_1_1_2383	GCA_000520055_1_1_2383	-	5402276	.	PFAM:PF09681.9	phage-replisome-organiser	MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGNISQTAKSPAERKRAQRERERKREQNGDCHGASRNVMHMSRRVTTDKDTDKDTDKDTDKDTDKDTDQEDQNTMVHGVKNATNQAGDVQTVNPGQPAGTTPEADSAYALKADSGAVQQVMTARPKQSHQLQQPEADSAIQREADRVVPENTGLSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWKARLREGVPPETMLDGVRRYARYLAATGKAGTEFVQRATTFFGPDRNFENPWLLPVSGTNNQRCVNHISEPDTEIPPGFRG*	rep_hall_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0048	cloud	direct	high	1106	0.999	GCA_000520055.1_02563
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2458406	2458831	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	39809	40234	GCA_000520055_1_1_2384	GCA_000520055_1_1_2384	-	5402276	.	pfam06254	Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	MKIKHEHIRMAMNAWAHPDGEKVPTAKITKAYFELGMTFPELYDDSHPEALARNTQKIFRWIEKDTPDAVEKIQALLPAIEKAMPPLLVARMRSHSSTYFRELVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNAVAVH*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0049	cloud	direct	high	425	0.998	GCA_000520055.1_02564
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2458815	2459057	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	40218	40460	GCA_000520055_1_1_2385	GCA_000520055_1_1_2385	-	5402276	.	pfam14549	DNA-binding transcriptional regulator Cro. Bacteriophage P22 Cro protein represses genes normally expressed in early phage development and is necessary for the late stage of lytic growth. It does this by binding to the OL and OR operator-regions normally used by the repressor protein for lysogenic maintenance.	MKKSEVLGYFGGVVKTAAALGTSKTTVSMWGEDVPWKWALLIQAVTAGALKYELHIPTVVIPDSDHNPPSNQGGIHENQA*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0050	cloud	direct	high	242	0.996	GCA_000520055.1_02565
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2459449	2459787	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	40852	41190	GCA_000520055_1_1_2386	GCA_000520055_1_1_2386	+	5402276	.	PFAM:PF08667.9	transcriptional-repressor	MKNSSITSCVQLVGEIPANTFAVVLESDSMSTSGGGVSIPNGSTVFVDPDRIVQPGNIVLALPKGTTTPVIRKLEIEGPDILLVPTNPRYPSIMLDDLSCILGVCFKIQQDI*	phrogs_hmm	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0051	cloud	direct	high	338	0.997	GCA_000520055.1_02566
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2459999	2460232	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	41402	41635	GCA_000520055_1_1_2387	GCA_000520055_1_1_2387	+	5402276	.	pfam07151	Protein of unknown function (DUF1391). This family consists of several Enterobacterial proteins of around 50 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi where they are often known as YdfA. The function of this family is unknown.	MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGAHRWLARNSD*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0052	cloud	direct	high	233	0.996	GCA_000520055.1_02567
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2460244	2460882	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	41647	42285	GCA_000520055_1_1_2388	GCA_000520055_1_1_2388	+	5402276	.	.	hypothetical protein	MEFKDLPPSIQEIAAHTLRHRLNELELESVTKKDTDNMARNVRDAFTGLYFCASINKHDSESVANKIAETTAQNINTKPTEEEIDQFAHDAGLKNKKEKSPYAGNMFVYDNLIRIRGEIPAEYLARVHQALLKNLETELFDGNTNGFFMVSGLDKDWDAEKRWNVATWLFSNRAAALEASACICGLFLTDHKYNLDVYSYIYAEHGPLWIDW*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0053	cloud	direct	high	638	0.998	GCA_000520055.1_02568
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2460883	2461092	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	42286	42495	GCA_000520055_1_1_2389	GCA_000520055_1_1_2389	-	5402276	.	.	hypothetical protein	MPNKKRNPLIEKQIECLVNQLRQSGLLKTHSELRLTESAFDDKLNNVLYNGIIDFNRSVGRRGPAGVSL*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0054	cloud	direct	high	209	0.995	GCA_000520055.1_02569
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2461657	2461845	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	43060	43248	GCA_000520055_1_1_2390	GCA_000520055_1_1_2390	+	5402276	.	pfam05358	DicB protein. DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.	METLLPNVNTSEGCFDIGVLLSNREFTEDAINMRKYEPYLLNDNSILSRIALLELGIFGERQ*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0055	cloud	direct	high	188	0.995	GCA_000520055.1_02571
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2461842	2462030	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	43245	43433	GCA_000520055_1_1_2391	GCA_000520055_1_1_2391	+	5402276	.	PF07358.11	Protein of unknown function (DUF1482)	MTSAFALMMTVFLITGESQNVITGIYASKESCLQARDEQKISGECLPVKKVSLYLNNETPAG*	hhsuite_tools	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0056	cloud	direct	high	188	0.995	GCA_000520055.1_02572
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2462123	2464630	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	43526	46033	GCA_000520055_1_1_2392	GCA_000520055_1_1_2392	+	5402276	.	PRK09709	exodeoxyribonuclease VIII. 	MSTDKEEFALYCEAKNDKVRKRLGIKGGFYWTTAKKLSVAISRCITAMDDNDYDEDDFKKPVRVHLPVVNDLPPEGVFDTEFCNRYEKGGEDGITMVFIAPSPSVQEKPASTDNTNVNGEDMTEIEENMLLPVSGQELPIRWLAQHGSEKPVTHVAREELQALHIARAEELPAVTALAISHNTKLLDPLEIRDLHKLARDTDKVFPNPGNSDLGLITAFFEAYLDADYTDRGLLTKEWMKGNRVSRITRTASGANAGGGNKTDRNPNLVHTFDTLDVEIAAATLPMDFNIYEIPGSVYRRAKEIVLKRESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINAYLTETDHENPSKETLTAARHTPEKDIPKNETAPEAEPSVEREGPFYFLFTDKDGEKYGRANKLSGLDKALSAGATEITKEEYFARKNGTYSGSQQNTGASDTTAQPGSVKVTADEVNKIMQAANISQPDADELLAVSRGEFVEGISDPNDPKWVKGIQTRDSVNQNQQETEQNDQKAEQNSPNTQQNEPETKQPEPVVQQEPEKICTACGQSGGGNCPDCGAVMGDATYQEIFDGENQPEVQENDPEEMEGTAHQHKENTGGNQHHASDSETGEASDPLIKANGHHNLTSTSRAGIHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARMAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADF*	mmseqs_cdd	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0057	cloud	direct	high	2507	1.0	GCA_000520055.1_02573
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2464689	2464892	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	46092	46295	GCA_000520055_1_1_2393	GCA_000520055_1_1_2393	+	5402276	.	PFAM:PF13986.5	excisionase	MSSLFLTEDELLILTGCKYASHQRKWLTENGLPFYTNRSGKPIVSRDLFTCNKTLPPREVEPNFGAI*	phrogs_hmm	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0058	cloud	direct	high	203	0.995	GCA_000520055.1_02574
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2464892	2465917	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	46295	47320	GCA_000520055_1_1_2394	GCA_000520055_1_1_2394	+	5402276	.	PDB:1Z19_B	Integrase	MGRRRKNPEHEKLPPNVYPNKYSYVWKPTSRESVTLTAIKDGLAALWKRYEETVNNRDRAMTFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWGYERGYVKGNPCAGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0059	cloud	direct	high	1025	0.999	GCA_000520055.1_02575
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2466153	2466950	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	47556	48353	GCA_000520055_1_1_2395	GCA_000520055_1_1_2395	+	5402276	.	PRK15410	DgsA anti-repressor MtfA; Provisional	MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0060	persistent	direct	high	797	0.999	GCA_000520055.1_02577
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2467288	2468550	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	48691	49953	GCA_000520055_1_1_2396	GCA_000520055_1_1_2396	+	5402276	.	PDB:1Z19_B	Integrase	MSLNDSKIRKLKSSSRPVKLSDSHGLYLLVNPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAEARQQRDGIRKLLAQNINPAQQRMAEKSACSPEKCFKAVALAWHKTNKKWSADYAARILASMENHIFPAVGHLPVAALKTQDFTALLRVIEDKGFLEVASRTRQQLSNIMRYAVQQGLTDSNPAQHLEGVVSSPVKNHYPALPLERLSELLGRIGDYQQGRELTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATREAIDKVRFSGRGAKMRTPHIVPLSRQAIALLKQIQELSGHLDLVFPGDHNPYKPMSENTTNRALRLMGYDTKTEICGHGLKAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEHLEARKAMMQWWSDYLDVCREGYVAPYIYARQHKAA*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0061	cloud	direct	high	1262	0.999	GCA_000520055.1_02579
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2468362	2468835	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	49765	50238	GCA_000520055_1_1_2397	GCA_000520055_1_1_2397	-	5402276	.	.	hypothetical protein	MVRRYSGVLIGISVKISRIDRFSSSVICGQITEGSYLSIMHLLIGSRLQIFYWNNFRCFPINNNKNSNNTSQYKKTDPGQSGSAFPVLMIYAISDSGCLMLPGINVRRNIPLAAHIQIIRPPLHHGLSGLQMLCFMHICRPHAVALLVAHLPLHRIA*	.	hypothetical_protein	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0062	cloud	direct	high	473	0.998	GCA_000520055.1_02580
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2469849	2470463	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	51252	51866	GCA_000520055_1_1_2398	GCA_000520055_1_1_2398	-	5402276	.	PDB:5JJV_B	Tyrosine-recombinase-XerH	MEHPRLTNKALGVSGASRNGTRRAITPEHYQQVMEKARTQDAGLAAVLEIARLMGLRSQEAVQSSQSLKTWLKTIERGENRLKVVFGTKGGRPRHTTVLDTGAVRKALEKALLAAEQCNSRLIDKPDLKTAMNHWHRQAVKVGLTGEFSPHSLRYAWAQDAIRHYLEQGFSEKESLALTATDLGHGDGRGRWVKQVYGYRWKEE*	common_virus_hmm	common_virus	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0063	cloud	direct	high	614	0.998	GCA_000520055.1_02581
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2470616	2470732	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	52019	52135	GCA_000520055_1_1_2399	GCA_000520055_1_1_2399	-	5402276	.	pfam12834	Phage integrase, N-terminal. This is a family of DNA-binding prophage integrases. It is found largely in Proteobacteria.	MSKLSSEMKALAKKAGGSFKTVNDHIHITNGSVNIYGR*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0064	cloud	direct	high	116	0.991	GCA_000520055.1_02582
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2471542	2471814	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	52945	53217	GCA_000520055_1_1_2400	GCA_000520055_1_1_2400	-	5402276	.	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain [Defense mechanisms]. 	MRMFNPHHPGAVLRDYLGGTSIVQAASALNISRSRLSRILNGHAPVTADMALRLAALLNTRAELWAGMQSEYDLWQASQKPRPVIRSLRG*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0065	cloud	direct	high	272	0.996	GCA_000520055.1_02584
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	CDS	2471965	2472219	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	53368	53622	GCA_000520055_1_1_2401	GCA_000520055_1_1_2401	-	5402276	.	pfam13693	Winged helix-turn-helix DNA-binding. 	MMQQDWHPADIIAGLRKQRTSLAEVSRSAGLASATLANALSRSWPRGEKLIADVLETSPEIICPSRYFDDQGNRTERPMRKRYS*	mmseqs_cdd	nonviral_gene	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_CDS_0066	cloud	direct	high	254	0.996	GCA_000520055.1_02585
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2627178	2627396	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	1	219	GCA_000520055_1_1_2540	GCA_000520055_1_1_2540	-	5402276	.	PRK09678	DNA-binding transcriptional regulator; Provisional	MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATLITYESVQRYIVKPGEVHAVRPHPLPSGQQIMWM*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0001	cloud	direct	high	218	0.995	GCA_000520055.1_02738
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2627478	2628641	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	301	1464	GCA_000520055_1_1_2541	GCA_000520055_1_1_2541	-	5402276	.	PDB:3D37_A	Tail-protein	MLDALTFDAGSTLTPDYMLMLDSRDITGNISDRLMSMTLTDNRGFEADQLDIELNDADGQVGLPVRGAVLTVYIGWKGFALVCKGKFTVDEVEHRGAPDVVTIRARSADFRGTLNSRREGSWHDTTLGAIVEAIASRNKLEASVAPSLAGIKIPHIDQSQESDAKFLTRLAERNGGEVSVKMGKLLFLKAGQGVTASGKKIPQVTITRSDGDRHHFAIADRGAYTGVTAKWLHTKDPKPQKQKVKLKRKKKEKHLRALEHPKAKPVRQKKAPKVPEAREGEYMAGEADNVFALTTVYATKAQAMRAAQAKWDKLQRGVAEFSISLATGRADIYTETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVEYETEDDE*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0002	cloud	direct	high	1163	0.999	GCA_000520055.1_02739
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2628641	2629120	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	1464	1943	GCA_000520055_1_1_2542	GCA_000520055_1_1_2542	-	5402276	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAFQFLGVGEENITLAGVLYPELTGGKLTMTTLRLMADEGRAWPLLDGTGMIYGMYVISRVSETGSIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0003	cloud	direct	high	479	0.998	GCA_000520055.1_02740
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2629135	2631582	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	1958	4405	GCA_000520055_1_1_2543	GCA_000520055_1_1_2543	-	5402276	.	PFAM:PF10145.8	minor-tail-protein	MSNNVKLQVLLRAVDQASRPFKSIRTASKSLSGDIRETQKSLRELNGHASRIEGFRKTSAQLAVTGHALEKARQEAEALATQFKNTERPTRAQAKVLESAKRAAEDLQAKYNRLTDSVKRQQRELAVVGINTRNLARDEQGLKNRISETTAQLNRQRDALARVSAQQAKLNAVKQRYQAGKELAGNMASVGAAGVGIAAAGTMAGVKLLMPGYEFAQKNSELQAVLGVAKDSAEMAALRKQARQLGDNTAASADDAAGAQIIIAKAGGDVDAIQAATPVTLNMALANRRTMEENAALLMGMKSAFQLSNDKVAHIGDVLSMTMNKTAADFDGMSDALTYAAPVAKNAGVSIEETAAMVGALHDAKITGSMAGTGSRAVLSRLQAPTGKAWDALKELGVKTSDSKGNTRPVFTILKEMQASFEKNRLGTAQQAEYMKTIFGEEASSAAAVLMTAASTGKLDKLTAAFKASDGKTAELVNIMQDNLGGDFKEFQSAYEAVGTDLFDQQEGALRKLTQTATKYVLKLDGWIQKNKSLASTIGLIVGGALALTGIIGAIGLVAWPVITGINAIIAAAGAMGAIFTTVGSAVMTAIGAISWPVVAVVAAIVAGALLIRKYWEPVSAFFGGVVEGLKAAFAPVGELFTPLKPVFDWLGEKLQAAWQWFTNLIAPVKSTQDTLNRCRDTGVMFGQALADALMLPLNAFNKLRSGIDWVLEKLGVINKESDTLDQTAARTHAATYGTGGYIPATSSYAGYQAYQPVTAPAGRSYVDQSKNEYHISLTGGTAPGTQLDRQLQDALEKYERDKRARARASMMHDG*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0004	cloud	direct	high	2447	1.0	GCA_000520055.1_02741
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2631727	2632002	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	4550	4825	GCA_000520055_1_1_2544	GCA_000520055_1_1_2544	-	5402276	.	PFAM:PF10109.8	tail-assembly-chaperone-protein	MNKENVITLENPVKRGEQVIEQVTLMKPNAGTLRGVSLAAVANSEVDALIKVLPRMTAPMLTEQEVAALELPDLVALAGKVVGFLSPNSVQ*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0005	cloud	direct	high	275	0.996	GCA_000520055.1_02742
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2632059	2632577	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	4882	5400	GCA_000520055_1_1_2545	GCA_000520055_1_1_2545	-	5402276	.	PFAM:PF04985.13	tail-tube-protein	MAMPRKLKYMNVFLNGYSYQGVANSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATSADAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEVDTGEGKQGEDTESKLPVICTYFRLTMDGKELVEIDTINMIEKVNGVDRLEQHRRNIGL*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0006	cloud	direct	high	518	0.998	GCA_000520055.1_02743
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2632590	2633780	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	5413	6603	GCA_000520055_1_1_2546	GCA_000520055_1_1_2546	-	5402276	.	PDB:3J9Q_C	sheath-tube	MSDFHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTVSNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFGYISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTATAYATARALGLRARIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRRDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTSVNSN*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0007	cloud	direct	high	1190	0.999	GCA_000520055.1_02744
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2634230	2634442	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	7053	7265	GCA_000520055_1_1_2547	GCA_000520055_1_1_2547	+	5402276	.	.	hypothetical protein	MLEWLNNYIGTDWATYLGVFLAILSLIWGGSKALKKKSINQKAKTNGGIVIQVGGNFQGENNNESKSSSK*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0008	cloud	direct	high	212	0.995	GCA_000520055.1_02745
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2634417	2635229	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	7240	8052	GCA_000520055_1_1_2548	GCA_000520055_1_1_2548	+	5402276	.	.	hypothetical protein	MNQKAQANENSTIIQVAGSLNQGISFADCERLFNLLLKENFPKLEAIAASTAKRNVDTLVKATFEKIDSKINQINVEKLAQPDVQSTFNSAVQGVARKGSKIDIDLLADLLEARIEKDNTNYIDNCIEAAVEMVPKLTSDMLVILPALYFIQELEWSNPTEIDNVYGLIYDRFLSRGGTISHSKLKTMASIGVGIYVNVIGSNTFEGMKKKYSCLQVINAESKYPRMHQALNFYDQKDLHQLTLTTPGQVIAIKMLEEIFPTINLRDFLQ*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0009	cloud	direct	high	812	0.999	GCA_000520055.1_02746
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2635571	2636098	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	8394	8921	GCA_000520055_1_1_2549	GCA_000520055_1_1_2549	-	5402276	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MQHLKNITAGNPKTVAQYQLTKNFDVIWLWSEDGKNWYEEVSNFQEDTIKIVYDENNIIVGITRDASTLNPEGFSVVEVPDITANRRADDSGKWMFKDGAVIKRIYTADEQHQLAESQKATLLSEAESVILLLERAVRLNMATEEERSRLEAWERYSVLVSRVDPANPEWPEMPQ*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0010	cloud	direct	high	527	0.998	GCA_000520055.1_02747
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2636102	2638030	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	8925	10853	GCA_000520055_1_1_2550	GCA_000520055_1_1_2550	-	5402276	.	PDB:5NXF_A	Long-tail-fiber	MSTKFKTVITTAGAAKLAAATAPGGRKVNITTMAVGDGGGKLPVPDAGQTGLIHEVWRHALNKISQDKRNSNYIIAELVIPPEVGGFWMRELGLYDDAGTLIAVANMAESYKPALAEGSGRSQTCRMVIIVSSVASVALTIDTTTVMATQDYVDDKIAEHEQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARKGLVQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARKGLVQLSSATNSDSETLAATPKAVKTAYDLANGKYTAQDATTARKGLVQLNSAINSDSETLAATPKAVKSAYDNAEKRLQKDQNGADIPGKDTFTKNIGACRAYSGALSTEAGNWTTAQFIEWLDSRGAFNHPYWMCKCSWSYGNNKIITDTGCGTIHLAGCVIEVMGNKGAMTIRVTTPSTSTGGGTTNAQFTYINHGDAYAPGWRRDYNTKNQQPAFALGQTGSRVANDKAVGWNWNSGVYDADISGASTLILHFNMNAGSCPAVQFRVNYKNGGIFYRSARDGYGFEADWSEFYTTTRKPSAGDVGAYTKAESDSRYVRDIRLGTRVVQTMQKGVMYEKSGHVITGLGIVGEVDGDDPAVFRPIQKYINGTWYNVAQV*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0011	cloud	direct	high	1928	0.999	GCA_000520055.1_02748
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2638041	2638571	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	10864	11394	GCA_000520055_1_1_2551	GCA_000520055_1_1_2551	-	5402276	.	PFAM:PF09684.9	Tail-protein	MSDSRLLPTGSSPLEVAAAKACAEIEKTPVRIRELWNPDTCPANLLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLFAGGVAYDGDVITVYPG*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0012	cloud	direct	high	530	0.998	GCA_000520055.1_02749
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2638564	2639472	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	11387	12295	GCA_000520055_1_1_2552	GCA_000520055_1_1_2552	-	5402276	.	CDD:PHA02568	baseplate-assembly-protein	MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVARTLTLESEPLVKLLEENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTTRLTITPADDSTIPPTPAVMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISVTSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSADIVEYQINATLYLYPGPESEPIRAAAVKKLEAYITAQHRLGRDIRLSAIYAALHVEGVQRVELTAPLADIVLNSTQASFCTEYRVVTGGSDE*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0013	cloud	direct	high	908	0.999	GCA_000520055.1_02750
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2639477	2639824	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	12300	12647	GCA_000520055_1_1_2553	GCA_000520055_1_1_2553	-	5402276	.	PDB:5IW9_B	Baseplate-wedge-protein	MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLASMIDQPQTPALELQIKVACYMAVLKWEPRVTLSSVTTARSFDGRITVTLTGQHNDTGQPLSLTIPVS*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0014	cloud	direct	high	347	0.997	GCA_000520055.1_02751
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2639821	2640456	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	12644	13279	GCA_000520055_1_1_2554	GCA_000520055_1_1_2554	-	5402276	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MNTLANIQELAHALRNMIRTGIIVETDLNAGRCRVQTGGMCTDWLQWLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPSPSVSADALHIRFPDGAVIEYEPETSALTVSGIKTASVTASDSVTATVPVVMVKASTRVTLDTPEVVCTNRLITGTLEVQKGGTMRGNIEHTGGELSSNGKVLHTHKHPGDSGGTTGGPL*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0015	cloud	direct	high	635	0.998	GCA_000520055.1_02752
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2640540	2641325	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	13363	14148	GCA_000520055_1_1_2555	GCA_000520055_1_1_2555	+	5402276	.	.	hypothetical protein	MVSYNVTNVWELIVFFLCSFAVLAFFSFGKSNLMRLIAHYFNFGYSDKKLKRLDREWRDIQPFKIINGINVSGIENVRMIQQELIDGKLKTSYFFLTRIWGDITKPPHIIKTIIVILASIFYILLACYIHNEQSAIVRDAIGIPYKNMMYYVYSDKVLLSFKNKAVEFNKTYSLADCKRLQNVFIKDTLPEIACNKLLQLNEEDSEWLSQEIKDNNSHKKALLILSLVYFTSGLVIFLSYTKFFYANKKVLEYKASNKNHS*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0016	cloud	direct	high	785	0.999	GCA_000520055.1_02753
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2641397	2641849	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	14220	14672	GCA_000520055_1_1_2556	GCA_000520055_1_1_2556	-	5402276	.	PFAM:PF05069.12	Virion-morphogenesis-family	MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMAQKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSRFLHIRASPEQAAMEFYGGKSPKIASVHQFGLSEENRKDGKKIDYPARPLLGFTGEDVQMIEEIILAHLER*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0017	cloud	direct	high	452	0.998	GCA_000520055.1_02754
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2641842	2642309	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	14665	15132	GCA_000520055_1_1_2557	GCA_000520055_1_1_2557	-	5402276	.	PFAM:PF06891.10	tail-completion-protein	MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLATSLSFEKRYTLNVIVTDFTGDFDLLIVPVLAWLRENQPDIMTTDAGQKKGFTFYADINNDSSFDISISLMLTERTLVSEVDGALHVKNIPEPPPPEPVTRPMELYINGELVSKWDE*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0018	cloud	direct	high	467	0.998	GCA_000520055.1_02755
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2642272	2642430	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	15095	15253	GCA_000520055_1_1_2558	GCA_000520055_1_1_2558	-	5402276	.	NF038368	Rz1-like lysis system protein LysC. LysC is an Rz1-like component of a phage lytic system, substantially overlapping although not fully embedded in the gene for the Rz-like LysB component. The phage lysis defect in the absence of a functional LysB/LysC system is appears in the presence of high concentrations of divalent cations.	MPGSDPETNGDLSADIRQLENALARCASQVKMIKYCQDENDAQTRQPAQGAD*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0019	cloud	direct	high	158	0.994	GCA_000520055.1_02756
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2642399	2643766	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	15222	16589	GCA_000520055_1_1_2559	GCA_000520055_1_1_2559	-	5402276	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIRRDALSAPFHAVAISGRPCRVPVTVSVSIHWKNWSPSGVPLAAYRLKRSKHHEEIIPFTDAERVAGADAGTVPDLPAERGRQFCRCLGDSGDGYLCGCRLCRRVCHRVCTGTLRAGASAGIAGREDCHVAVFAAGAVAQTGSGSGGDGGDVYLAGRRRMDFYRADLSRGVTVFPADTYGLPSAFWGAGTMSKLMIVLVVLLSLAVVGLFLAKHENASLRTSLDRASNVASGQQTTITMLKNQLHVALTRADKNELAQVALRQELENAAKREAQREKTITRLLNENEDFRRWYGADLPDAVRRLHQRPACTDASDCPQRLPQSEPLPDAGQRPGDER*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0020	cloud	direct	high	1367	0.999	GCA_000520055.1_02757
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2643766	2644047	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	16589	16870	GCA_000520055_1_1_2560	GCA_000520055_1_1_2560	-	5402276	.	pfam04550	Phage holin family 2. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the buildup of a holin oligomer which causes the lysis.	MTAEEKSVLSLFMIGVLIVVGKVLAGGEPITPRLFIGRMLLGGFVSMVAGVVLVQFPDLSLPAVCGIGSMLGIAGYQVIEIAIQRRFKGRGKP*	mmseqs_cdd	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0021	cloud	direct	high	281	0.996	GCA_000520055.1_02758
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2644051	2644254	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	16874	17077	GCA_000520055_1_1_2561	GCA_000520055_1_1_2561	-	5402276	.	pfam05489	Phage Tail Protein X. This domain is found in a family of phage tail proteins. Visual analysis suggests that it is related to pfam01476 (personal obs: C Yeats). The functional annotation of family members further confirms this hypothesis.	MKTFALQGDTLDAICVRYYGRTEGVVETVLAANPGLAELGAVLPHGTAVELPDVQTAPVAETVNLWE*	mmseqs_cdd	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0022	cloud	direct	high	203	0.995	GCA_000520055.1_02759
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2644254	2644763	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	17077	17586	GCA_000520055_1_1_2562	GCA_000520055_1_1_2562	-	5402276	.	PFAM:PF05926.10	head-completion-protein	MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKRVRERMRLEQTVAPARLREAIKSGMAETNAELYEYREQKIAAGFTRLADVPADDIDGESIKVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQDKPRCIVSQI*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0023	cloud	direct	high	509	0.998	GCA_000520055.1_02760
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2644863	2645606	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	17686	18429	GCA_000520055_1_1_2563	GCA_000520055_1_1_2563	-	5402276	.	CDD:PHA02537	terminase-endonuclease-subunit	MTSPAQRHMMRVSAAMTAQREAAPLRHATVYEQMLVKLAADQRTLKAIYSKELKAAKKRELLPFWLPWVNGVLEQGKGAQDDILMTVMLWRLDTGDIAGALEIARYAMKYGLTMPGKHRRTPPYMFTEEVALAAMRAHAAGESVDPRLLTDTLELTATADMPDEVRAKLHKITGLFLRDAGDAAGALAHLQRATQLDCQAGVKKEIERLERELKPKPEPQPKAATRAPRKTRSATPAKRGRPKKKAS*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0024	cloud	direct	high	743	0.999	GCA_000520055.1_02761
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2645610	2646683	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	18433	19506	GCA_000520055_1_1_2564	GCA_000520055_1_1_2564	-	5402276	.	CDD:PHA02538	capsid-protein	MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRIRNAIIKRQSLDFIMAGFNGVKRAETSDRSSNPMLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEVIRVGKGGDYVSLDALVMDATNNLIEPWYQEDPDLVVIVGRQLLADKYFPIVNKEQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIEENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKVGDFSTPAKATAEPGA*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0025	cloud	direct	high	1073	0.999	GCA_000520055.1_02762
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2646742	2647596	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	19565	20419	GCA_000520055_1_1_2565	GCA_000520055_1_1_2565	-	5402276	.	PFAM:PF05929.10	capsid-scaffolding-protein	MAKKVSKFFRIGVEGDTCDGRVISAQDIQEMAETFDPRVYGCRINLEHLRGILPDGIFKRYGDVAELKAEKIDDDSALKGKWALFAKITPTDDLIAMNKAAQKVYTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLNRFKLSPENLISVATPVELEFEDLPETVFTALTEKVKSIFGRKQASDDARLNDVHEAVTAVAEHVQEKLSATEQRLAEMETAFSALKQEVTNRADETSQAFTRLKNSLDHTESLTQQRRSKATGGGGDALMTNC*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0026	cloud	direct	high	854	0.999	GCA_000520055.1_02763
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2647770	2649542	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	20593	22365	GCA_000520055_1_1_2566	GCA_000520055_1_1_2566	+	5402276	.	CDD:PHA02535	terminase-ATPase-subunit	MTITTDTTLLHDPRRQAALLYWQGFSVPQIAAMLQMKRPTVQSWKQRDGWDSVAPISRVEMSLEARLTQLIIKPQKTGGDFKEIDLLGRQIERLARVNRYSQTGNEADLNPNVANRNKGGRRKPKKNFFSDEAIEKLEQIFFEQSFEYQLHWYRAGLEHRIRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIAFARLVDVDLTGDPIVLGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQVLRKVASGMASQSHLRSTYFSTPSTLAHDAYPFWSGELYNRGRASAAERVEIDVSHNALAGGLLCADGQWRQIVTIEDALKGGCTLFDIEQLKRENSADDFKNLFMCEFVDDKASVFPFEELQRCMVDTLEEWEDYAPFAANPFGSRPVWIGYDPSHRGDSAGCVVLAPPVVAGGKFRILERHQWKGMDFATQAESIRKLTEKYNVEYIGIDATGLGVGVFQLVRSFYPAARDIRYTPEMKTAMVLKAKDVIRRGCLEYDVSATDITSSFMAIRKTMTSSGRSATYEASRSEEASHADLAWATMHALLNEPLTAGISTPLTSTILEFY*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0027	cloud	direct	high	1772	0.999	GCA_000520055.1_02764
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2649542	2650576	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	22365	23399	GCA_000520055_1_1_2567	GCA_000520055_1_1_2567	+	5402276	.	CDD:PHA02536	portal-vertex-protein	MSKKKGKTPRPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDIYWWVPSFNEPTPFTPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGDIEKVAKVFVRNELIPLQDRIREINGWLGQEVIRFKNYSLDTDNG*	hallmark_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0028	cloud	direct	high	1034	0.999	GCA_000520055.1_02765
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2650889	2652910	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	23712	25733	GCA_000520055_1_1_2568	GCA_000520055_1_1_2568	-	5402276	.	PF12532.8	Protein of unknown function (DUF3732)	MSLEIISLELVANTSDGRYGVSIPFSNGLFLLRVENSHGKSTCMNGIAYALGMEKALGVGSGKIPFPPSLTRALTTKDNVEVSVISSYVLLKIKNHKGIEASLKRNIIGHDNNNVIYIDEKNNVKSKSGTYFLHREGDTERERGFYKWLADFIGWSLPNVPNHNGKDTILYPSVLFPAWYVEQKKGWSSIMATVPTQFGIKEPKKRALEFLMSLDVNDNILLRSSLRNELDIIYHDWKLIKHNAEVIASKLSSVVTGIPEQPVAKFDHYKIDLIIKNGSVVRSIVDVRNELEKELQEIKFDTLGEQEEQTLQLSVVKLLGQKNDEINSLELKIKEICEHRSYIQYQIQATKNRLYNLLEDKRKYEDLKKISSSDAYKSTDLMSNICPTCGASYNDNLLSFSSQENLMTYEDSLNFIKEQVKAFEFVLSDSEKQLKLKDVERSDLEGEIAKIRVDINALRESKYPSMVVQEEFLRRKINIENKINAINDGIKSILDIRLELDSLHRRYKKLIAKRKGLPDNFLSRNDADKLKFLNKEVVARLEKYNFTSFDSKLVSISEDNYLPTREGYDIGFDTSASDGIRIIWGYLISLFVVGSKFQTNHPGLIVFDEPRQQEANKVSFAELLKDAAETTKGQGQIIFATSEDENVLKEALEGYDYTMISFDKNNGKLLRKL*	hhsuite_tools	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0029	cloud	direct	high	2021	1.0	GCA_000520055.1_02766
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2652912	2653376	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	25735	26199	GCA_000520055_1_1_2569	GCA_000520055_1_1_2569	-	5402276	.	.	hypothetical protein	MHITIDEIIGRPFTFNKRPEHLPCDMRPLWRCSLLLIIFLVTGRAGCCSLKKLHLINWMLKSENNEAMFEFWLLNKEGLKPEVRLDPTLDRAIQLLLAEDFILRNERAFKINEKGLKVAEKLLSLDVFKEERLVLNKHKAGLSETNINKIFQVG*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0030	cloud	direct	high	464	0.998	GCA_000520055.1_02767
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2653390	2654310	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	26213	27133	GCA_000520055_1_1_2570	GCA_000520055_1_1_2570	-	5402276	.	.	hypothetical protein	MGLAMYNDPYSDPKAWESYFKNIVWLHYKPANCCDLPDEHGGDFGLECYTLSGHVFQCYLPEQSSDIDKLYKAQQKKIYTDIKKFSQDNIKELEELFGTLKISRWILATPYNKSAKLSQYCTKKSLKVRELGISYVADDFQIVVQTDRNYIEEAFFLRKNNYQLSFNINDATAENAANFISENTSFLDKLNLKLPKINDDVSRQGLYREFLIQKYLDYQNLLDALKRDWVDIYEIIYNCVQHRERNLVGLFLLTSSDAKPSDIMKDEIALLKKCIEEEVSTLKQADLDKITWGVISDWLIRCPLDF*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0031	cloud	direct	high	920	0.999	GCA_000520055.1_02768
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2654421	2656694	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	27244	29517	GCA_000520055_1_1_2571	GCA_000520055_1_1_2571	-	5402276	.	PFAM:PF05840.12	Rep-protein	MAVKASGRFVPPSAFAAGTGKMFTGAYAWNAPREAVGRERPLTRDEMRQVQGVLSTINRLPYFLRSLFTSRYDYIRRNKSPVHGFYFLTSTFQRRLWPRIERVNQRHEMNTDASLLFLAERDQYARLPGMNDKELKKFAARISSQLFMMYEELCDAWVDAHGEKESLFTDEAQAHLYGHVAGAARAFNISPLYWKKYRKGQMTTRQAYSAIARLFNDEWWTHQLKGQRMRWHEALLIAVGEVNKDRSPYASKHAIRDVRARRQANLEFLKSCDLENRETGERIDLISKVMGSISNPEIRRMELMNTIAGIERYAAAEGDVGMFITLTAPSKYHPTRQVRKGESKTVQLNHGWNDEAFNPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEIMRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNIDGYALDGQLDNDTGKPLKDTAAAVTAWASTWRIPQFKTVGLPTMGAYRELRKLPRGVSIADEFDERVEAARAAADSGDFALYISAQGGANVPRDCQTVRVARSPSDDVNEYEEEVERVVGIYAPHLGARHIHITRTTDWRIVPKVPVVEPLTFKSGIAAPRSPVNNCGKVTGGDTSLPAPTPSEHAAAVLNLVDDGVIEWNDPEVVRALRGALKHGLRTPNRQQRNGSPLKPHEIAPSARLTRSERLQITRIRVDLAQNGIRPQRWELEALARGAIVNYGAKEFHYHVQKAWEAFSRW*	rep_hall_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0032	cloud	direct	high	2273	1.0	GCA_000520055.1_02769
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2656684	2656959	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	29507	29782	GCA_000520055_1_1_2572	GCA_000520055_1_1_2572	-	5402276	.	PFAM:PF17399.1	replication-initiation-protein	MSIRIEIGERYVVTSDSFQFILHEKKRAESGKNAGQEWLAVVGYYPKLSQLVSGLMHHDILTGSAKSFADLNAQVEQLSRRCSEAFGSYGR*	phrogs_hmm	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0033	cloud	direct	high	275	0.996	GCA_000520055.1_02770
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2656956	2657180	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	29779	30003	GCA_000520055_1_1_2573	GCA_000520055_1_1_2573	-	5402276	.	PHA00080	DksA-like zinc finger domain containing protein	MPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKHYRRTA*	mmseqs_cdd	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0034	cloud	direct	high	224	0.996	GCA_000520055.1_02771
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2657183	2657482	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	30006	30305	GCA_000520055_1_1_2574	GCA_000520055_1_1_2574	-	5402276	.	PFAM:PF17399.1	replication-initiation-protein	MSCSHSVVLLNNALKIAVMKNGDLSLIQLCLDKEKRDITESVIAIYQNELNLLSDVVNLLVKRAVFHKQISSVDELTKLTTELASYCADVSRKLNDKRS*	phrogs_hmm	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0035	cloud	direct	high	299	0.997	GCA_000520055.1_02772
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2657482	2657706	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	30305	30529	GCA_000520055_1_1_2575	GCA_000520055_1_1_2575	-	5402276	.	PF10809.8	Protein of unknown function (DUF2732)	MHTVSENQCGKYALLLHQARTEAQADAATRFSSHLDAMIRHITKAELSRVEIVELLSQESEKFHNIGLSRGEVL*	hhsuite_tools	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0036	cloud	direct	high	224	0.996	GCA_000520055.1_02773
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2657770	2658270	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	30593	31093	GCA_000520055_1_1_2576	GCA_000520055_1_1_2576	-	5402276	.	PF17282.2	Family of unknown function (DUF5347)	MTVMTLNLVEKQPAAMRRIIGKHLAVPRWQETCDYYNQMMERERLTVCFHAQLKQRHATMRFEEMNDVERERLVCAIDELRGAFSKRRQVGASEYAYISFLTVSQRRTLFMHAGLTEKEFNQPYWRINEESCYWRDALFRALRELFSLFEYAPTILTSVKPEQYLH*	hhsuite_tools	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0037	cloud	direct	high	500	0.998	GCA_000520055.1_02774
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2658267	2658437	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	31090	31260	GCA_000520055_1_1_2577	GCA_000520055_1_1_2577	-	5402276	.	.	hypothetical protein	MNEPRCIAQLLRNESPRAIDFTITHGKGRKGIIIRTKKQSPLKKALTFLKSRRVWK*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0038	cloud	direct	high	170	0.994	GCA_000520055.1_02775
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2658448	2658723	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	31271	31546	GCA_000520055_1_1_2578	GCA_000520055_1_1_2578	-	5402276	.	pfam10743	Regulatory phage protein cox. This family of phage Cox proteins is expressed by Enterobacteria phages. The Cox protein is a 79-residue basic protein with a predicted strong helix-turn-helix DNA-binding motif. It inhibits integrative recombination and it activates site-specific excision of the HP1 genome from the Haemophilus influenzae chromosome, Hp1. Cox appears to function as a tetramer. Cox binding sites consist of two direct repeats of the consensus motif 5'-GGTMAWWWWA, one Cox tetramer binding to each motif. Cox binding interferes with the interaction of HP1 integrase with one of its binding sites, IBS5. This competition is central to directional control. Both Cox binding sites are needed for full inhibition of integration and for activating excision, because it plays a positive role in assembling the nucleoprotein complexes that produce excisive recombination, by inducing the formation of a critical conformation in those complexes.	MNRQLVSVTDAVPYQEFAKLIGKTPRAVRGMIEKGKLPVIEITDPQSVSGRAGEYWVYLPAWNNGLKLAYESRPKEIRDGWLMWLGLGEPR*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0039	cloud	direct	high	275	0.996	GCA_000520055.1_02776
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2658845	2659144	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	31668	31967	GCA_000520055_1_1_2579	GCA_000520055_1_1_2579	+	5402276	.	PFAM:PF10078.8	transcriptional-regulator	MSIDVSEKLKLIRESERLNRKEFSELTGVAYSSLSSYESRSKNAGVEAIMKVLQHPRFTKYTLWFMTDQVAPEAGQIAPALAHFGQNETTSPHSGQKTG*	phrogs_hmm	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0040	cloud	direct	high	299	0.997	GCA_000520055.1_02777
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2659260	2659541	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	32083	32364	GCA_000520055_1_1_2580	GCA_000520055_1_1_2580	+	5402276	.	PDB:5C6K_B	Integrase	MAIKKLDDGRYEVDIRPTGRNGKRIRRKFDKKSEAVAFEKYTLYNHHNKEWLSKPTDKRRLSELTQIWWDLKGKHEEHGKSNLGKIEIFTKIT*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0041	cloud	direct	high	281	0.996	GCA_000520055.1_02778
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2659575	2661113	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	32398	33936	GCA_000520055_1_1_2581	GCA_000520055_1_1_2581	-	5402276	.	PFAM:PF03050.13	Transposase-IS66-family	MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTRRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGRITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0042	shell	direct	high	1538	0.999	GCA_000520055.1_02779
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2661163	2661510	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	33986	34333	GCA_000520055_1_1_2582	GCA_000520055_1_1_2582	-	5402276	.	NF033819	IS66 family insertion sequence element accessory protein TnpB. The IS66 family insertion sequence element encodes a DDE transposase TnpC, and two accessory proteins, TnpA and TnpB. It has been assumed that the TnpA, TnpB, and TnpC proteins are produced independently in appropriate amounts and form a complex, which acts as a transposase to promote the transposition of an IS66 family element.	MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0043	shell	direct	high	347	0.997	GCA_000520055.1_02780
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2661507	2661887	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	34330	34710	GCA_000520055_1_1_2583	GCA_000520055_1_1_2583	-	5402276	.	NF038385	IS66-like element accessory protein TnpA. 	MQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR*	mmseqs_cdd	nonviral_gene	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0044	cloud	direct	high	380	0.997	GCA_000520055.1_02781
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2662106	2662723	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	34929	35546	GCA_000520055_1_1_2584	GCA_000520055_1_1_2584	+	5402276	.	PDB:5C6K_B	Integrase	MFTALIEAELFFGEHPIRGTKRLKEEKPETGYLTQEEIALLLAALDGDNKKIAILCLSTGARWGEAARLKAENIIHNRVTFVKTKTNKPRTVPISEAVAKMIADNKRGFLFPDADYPRFRRTMKAIKPDLPTGQATHALRHSFATHFMINGGSIITLQRILGHTRIEQTMVYAHFAPEYLQDAISLNPLRGGTEAESVHTVSTVE*	common_virus_hmm	common_virus	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0045	cloud	direct	high	617	0.998	GCA_000520055.1_02782
GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote	cenote	CDS	2662989	2663306	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C125	35812	36129	GCA_000520055_1_1_2585	GCA_000520055_1_1_2585	-	5402276	.	.	hypothetical protein	MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDNQYYTEAEASLARGRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFKCGE*	.	hypothetical_protein	C125	36129	2627178	2663307	GCA_000520055.1|CP006262.1@region_2627179_2663307@tool_cenote_CDS_0046	persistent	direct	high	317	0.997	GCA_000520055.1_02783
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2709348	2710556	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	1	1209	GCA_000520055_1_1_2625	GCA_000520055_1_1_2625	+	5402276	.	.	hypothetical protein	MFAAKPELSQRCISGLLTTGPNDENVNNKPSSDMPNRIKPVVSDSQIGIYTTDSNTLKDGLCSQAHIGTQPYRPGADSPITVRSFLQITLSNNNYKSLEHLQTRAENYLRYRKAEENILRSTVEGLTNPESPVFKQTAWMGHLERGLWKTETRWDGNDREQLGKEALGSEEPKPGSPFYGSRGLKLSDSAHSAFSMMLCGSEGPFTKEQALSGFELAQTGQVLAGRLKIQERVKFRADNRIDAQRNGTHSTRTPTGMDLSQDIGTIMRDKAGLPVMSGTSGSSSDATLATRYAAEHFGKTWAAPGLSQAEGCKAISDLSHHYFRAEGSSPPQSMATGINKVRYDAGMEEKYVNTLDIFTHSYPEIYAGVALTIAGAGGNDEQAMYNVTQEAARILYEAETKD*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0001	cloud	direct	high	1208	0.999	GCA_000520055.1_02826
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2711208	2712443	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	1861	3096	GCA_000520055_1_1_2626	GCA_000520055_1_1_2626	+	5402276	.	cd21500	bacterial effector protein NleA, and similar proteins. This family includes non-locus of enterocyte effacement (non-LEE) encoded effector A (NleA), a bacterial effector protein injected by enteropathogenic and enterohemorrhagic Escherichia coli (EPEC and EHEC), both related strains capable of inducing severe gastrointestinal disease. These pathogens modulate cellular functions via the deployment of effector proteins in a type three secretion system (T3SS)-dependent manner. In response, the host Nod-like receptor pyrin domain containing (NLRP) inflammasome activates caspase-1 and releases IL-1beta. NleA plays a role in controlling the host immune response through targeting of Nod-like receptor 3 (NLRP3); it has been identified as the effector that can subdue IL-1beta secretion by inhibiting caspase-1 activation, thus inhibiting NLRP inflammasome activation. NleA interacts with NLRP3 via regions containing the PYD and LRR domains. NleA has also been shown to associate with non-ubiquitinated and ubiquitinated NLRP3 and to interrupt de-ubiquitination of NLRP3, which is a required process for inflammasome activation.	MNIQPIVQSGITTQNNQHHHTEQTPPTQIPQSELPNGCETGFVVYIPEDMQRHAPECGETTALLGLIRDKGLLSGLDAYLAPHLEEGSAGKKALDMFGLFNVTQMALEIPSSVPGVSGKYGVQMNIVKPDIHPTTGNYVLQLFPAHDEIGINYRDLPGPLKNVLSSDAVPWFGLTAQVVRNHGVELPIVKTENGWKLVGETPLTPDGPKANYTEEWVIRPAEADLKYGTSPFQATLGLEFGAHFKWDLDNPRTKYAVLTNAAANAVGAAGGFAVSRLTGVAPMLAPHIGSMAGQAVGHAVQCNTQGLKPDAILWWAGSTLGLADLNKAETGEARFTDYPRIWWHAREGAIFPNKEDIARATGADIRAMEEGVPVDHRHPHPEDVVIDIESSPHNNPSNYVDTVDIIRETRV*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0002	cloud	direct	high	1235	0.999	GCA_000520055.1_02827
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2713270	2713416	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	3923	4069	GCA_000520055_1_1_2627	GCA_000520055_1_1_2627	+	5402276	.	PRK09413	IS2 repressor TnpA; Reviewed	MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFL*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0003	shell	direct	high	146	0.993	GCA_000520055.1_02828
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2713450	2713635	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	4103	4288	GCA_000520055_1_1_2628	GCA_000520055_1_1_2628	+	5402276	.	PRK09413	IS2 repressor TnpA; Reviewed	MAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0004	shell	direct	high	185	0.995	GCA_000520055.1_02829
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2713593	2714498	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	4246	5151	GCA_000520055_1_1_2629	GCA_000520055_1_1_2629	+	5402276	.	PDB:4U7B_B	Mos-transposase	MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGEKLRVTFALDCCDREAMHWAVTTGGFDSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETLQFARMLGLEPKNTAVLSPDSNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0005	shell	direct	high	905	0.999	GCA_000520055.1_02830
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2714653	2715303	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	5306	5956	GCA_000520055_1_1_2630	GCA_000520055_1_1_2630	+	5402276	.	pfam06416	Effector protein NleG. Many bacterial pathogens deliver effector proteins into host cells via a type III secretion system. These effector proteins then alter the host cell's biology in ways that are advantageous to the pathogen. The NleG protein and its homologs form the largest family of effector proteins in the enterohemorrhagic Escherichia coli O157:H7, with 14 members identified in the Sakai strain alone.	MPIFLNFTAGSILPENELASLRYIVQQNQNDTVIIKERYKMDIRYIESVNGFTVNPVCSNHFSIFMTRQNTIARNLEQQINNGRSFAQISQDFMLQLSSNIGWKKGAENALKNKIHSHSFVVNPDEFSCDTQFLKCPITLCVPEKGVFVKNALNSNICTLYDKSAFMNLTREHLPHPLSREKIVKEMIIERNMCYFDTISQYFIIMDADQQKQHCK*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0006	cloud	direct	high	650	0.998	GCA_000520055.1_02831
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2715528	2716133	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	6181	6786	GCA_000520055_1_1_2631	GCA_000520055_1_1_2631	-	5402276	.	PFAM:PF11713.7	T3SS-secreted-effector-Ibe	MEFTYPGANKSHLQSSNSDVVAAAAISITATEMKTILPDDLTPGKYNKIYLSGHGSAGLPLLKCGDEFLSPSDIVDRIVQHNLHEIDDIRLTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSISGYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0007	cloud	direct	high	605	0.998	GCA_000520055.1_02832
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2716369	2716665	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	7022	7318	GCA_000520055_1_1_2632	GCA_000520055_1_1_2632	-	5402276	.	NF038385	IS66-like element accessory protein TnpA. 	MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRVSRRLPVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLY*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0008	cloud	direct	high	296	0.997	GCA_000520055.1_02833
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2717057	2717326	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	7710	7979	GCA_000520055_1_1_2633	GCA_000520055_1_1_2633	-	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNVLKKLMQRLCGCGKHDDRENGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0009	cloud	direct	high	269	0.996	GCA_000520055.1_02834
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2717328	2718641	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	7981	9294	GCA_000520055_1_1_2634	GCA_000520055_1_1_2634	-	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0010	cloud	direct	high	1313	0.999	GCA_000520055.1_02835
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2718706	2719305	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	9359	9958	GCA_000520055_1_1_2635	GCA_000520055_1_1_2635	-	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHASTNVPGSDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0011	shell	direct	high	599	0.998	GCA_000520055.1_02836
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2719372	2722851	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	10025	13504	GCA_000520055_1_1_2636	GCA_000520055_1_1_2636	-	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGKAHTPVEAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIGQYCDQRVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAVPATIELTPGYFQITAVPRLAVYDPTVQFEFWFSETKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAFVEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGTITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0012	cloud	direct	high	3479	1.0	GCA_000520055.1_02837
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2723089	2723670	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	13742	14323	GCA_000520055_1_1_2637	GCA_000520055_1_1_2637	-	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKPKTPEYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0013	cloud	direct	high	581	0.998	GCA_000520055.1_02838
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2723667	2724410	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	14320	15063	GCA_000520055_1_1_2638	GCA_000520055_1_1_2638	-	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTQTESAILAHARRCAPAESCGFVISTPEGEWYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWWLVCRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFEREDDWWRNGQNLYLDNMEATGFYRISLPSAQPGDILLCCFGASVANHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0014	persistent	direct	high	743	0.999	GCA_000520055.1_02839
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2724421	2725119	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	15074	15772	GCA_000520055_1_1_2639	GCA_000520055_1_1_2639	-	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQNIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEAVTWQGREYQAYPIDGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELRDRWVVEQMSELTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCEMRGMVANFGGFLSINKLSQ*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0015	cloud	direct	high	698	0.999	GCA_000520055.1_02840
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2725119	2725460	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	15772	16113	GCA_000520055_1_1_2640	GCA_000520055_1_1_2640	-	5402276	.	PFAM:PF05939.12	minor-tail-protein	MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNPQLKTFQAVFRVTDESTRRWLDEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYSDFSCTIEQVVN*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0016	cloud	direct	high	341	0.997	GCA_000520055.1_02841
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2725453	2728695	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	16106	19348	GCA_000520055_1_1_2641	GCA_000520055_1_1_2641	-	5402276	.	PFAM:PF06120.10	Tail-length-tape-measure-protein	MATLRELIIKISANSQSFQSEIQRASRMGSEYYRTLQNGGRQAAAAAREQRRALAELHSQLTEIRASAVGMTGAFAGAFATGHLISLADEWSSVNARLKQASQSSDEFASSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVTEAISTGLKISGASTAEAGSVITQFSQALAQGVLRGEEFNSVNESGDRIVRALAAGMGVARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSSSITKVENAFMAWVGGANEASGVTKTLSGMLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAMSATAGLVTAARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNRNIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQARESARQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQYVLANPGWTTGDGFMINHLTSVKTVTEGLSQATEQLAVEQSRLAQMQEKAQSIQDVLAGLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRLPQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDPYQEARQRYISNALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALVGQNTELAKLKYQTALGELKTLTEMQKQELLRNATLIDQQKIREQLRSREETLKNENAAARASNDAELLGYGQGERARERMRELQQIRDSFRQKDADLQSQYQSGDISEDFYRQALAQNAQYLSERLKDQETFYAESDAQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNKVEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFLGSIGDWLGGAVANAKGGVYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMNGSAGLVYSPVYHIAIQNDGANGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0017	cloud	direct	high	3242	1.0	GCA_000520055.1_02842
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2728747	2728956	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	19400	19609	GCA_000520055_1_1_2642	GCA_000520055_1_1_2642	-	5402276	.	PFAM:PF06223.11	tail-protein	MWMEFDRVSPLGDERGDIRNAQIVKAVFGAQGMNVALKDAMLCWGEDEDKPEVDPFAALEDALSLAAMS*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0018	cloud	direct	high	209	0.995	GCA_000520055.1_02843
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2729052	2729426	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	19705	20079	GCA_000520055_1_1_2643	GCA_000520055_1_1_2643	-	5402276	.	pfam06222	Phage tail assembly chaperone. 	MAKDLKTLALARLSGFRHKTVKVPEWRNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0019	cloud	direct	high	374	0.997	GCA_000520055.1_02844
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2729432	2730148	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	20085	20801	GCA_000520055_1_1_2644	GCA_000520055_1_1_2644	-	5402276	.	PFAM:PF16463.4	Tail-tube-protein	MSALYERSLLTQVMISSAPATAETMDKAEYLRLDCAIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNPEKTLTVNTGALLTMSVSVNGGTPPYKYAWKKDGQPVEGQTTDTFSKANAQSGDKGAYTCMVMDSAEQPQSITSDACTVTVNGAGG*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0020	cloud	direct	high	716	0.999	GCA_000520055.1_02845
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2730216	2730560	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	20869	21213	GCA_000520055_1_1_2645	GCA_000520055_1_1_2645	-	5402276	.	PFAM:PF05657.10	tail-component	MTEADLYPYLAHLAGGQVYPYVVPLLDGRPSVALPWVVFSLISSVSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENRCYRATLEFQVTV*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0021	cloud	direct	high	344	0.997	GCA_000520055.1_02846
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2730557	2731003	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	21210	21656	GCA_000520055_1_1_2646	GCA_000520055_1_1_2646	-	5402276	.	PFAM:PF04883.11	tail-component	MIETLLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRAPVRRGKLRRNVVVLSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0022	cloud	direct	high	446	0.998	GCA_000520055.1_02847
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2731000	2731350	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	21653	22003	GCA_000520055_1_1_2647	GCA_000520055_1_1_2647	-	5402276	.	CDD:COG5614	Head-Tail-Connector-protein	MAISAGRLTQMISVLKPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0023	cloud	direct	high	350	0.997	GCA_000520055.1_02848
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2731361	2731687	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	22014	22340	GCA_000520055_1_1_2648	GCA_000520055_1_1_2648	-	5402276	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELIQGELPFSVSVLIYDLRCPTVL*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0024	cloud	direct	high	326	0.997	GCA_000520055.1_02849
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2731684	2732907	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	22337	23560	GCA_000520055_1_1_2649	GCA_000520055_1_1_2649	-	5402276	.	PFAM:PF06074.11	portal-protein	MTERELSIIRALGEEFSTVLADLQRTFEGKMASQAQAFEEKLTSLSAVLQKHVTVDEVRPVLQAMVDDAVGAIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQKAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVLDAVRALPAPQDGRDATALEIIPAIDDQKSFPRGTYATHQGGLWRAYEKTHGMRGWECLVDGVADIDVSMTGERSFTVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTVTWGGSLWHCNSMTGDKPGEAHSSGWTLAAKRGRDAGGGK*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0025	cloud	direct	high	1223	0.999	GCA_000520055.1_02850
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2732904	2734268	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	23557	24921	GCA_000520055_1_1_2650	GCA_000520055_1_1_2650	-	5402276	.	PDB:3KDR_A	Portal-Protein	MWNFLRRTRKNQKSGRDVKEVGWTSLFQAVVEPFAGAWQQGVKADPESVLSFHAVFSCISLISQDIAKMRLRLMQTDTQGIRREKRQGDIARLCRRPNAQQNRIQFFELWLNSKLRHGNTVVLKIRNSRGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLVGLPPVYAAGLAAMQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGHPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGESVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASAGKTVSAQLPDGASDGNKAISETEHDAVKAMFRGILRK*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0026	cloud	direct	high	1364	0.999	GCA_000520055.1_02851
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2734480	2736417	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	25133	27070	GCA_000520055_1_1_2651	GCA_000520055_1_1_2651	-	5402276	.	PDB:8ECN_B	Major-Capsid-Protein	MTLKRACSLLTVKSFSEDERVITGIASTPSPDRDGDILEPEGAEFGSTIPFLWQHDHSRPVGQCTVRRVREGLEITAMLVKPEPGMPSQMAARLDEAWAAIKTGLVRGLSVGFRPHEYTYLDGGGLHFLRWELMEVSAVTVPANAECTIRTIKSYDRPFSAASGNRKPVVKIASSAGASAQSITSFHKEKSAMNTGEQIKSFENKRAALAASLEEIMNKAAEEGRTLDVEEEEHYDNTAAEIRQVDAHLKRLRELEAGKAATAQPVKQAGNGNVATVASAPVIRVEQKLDKGIGFARFAKSLAAAKGVRSEALEVARRQYPDDSRLHHVLKSAVGAGTTTDPQWAGSLSEYQEYAQDFIDYLRPQTIIGRFGQGGIPALRQVPFNIRVHAQVSGGAAGWVGEGKAKPLTKFDFESITFSHAKVSAIAVLTEELIRFSSPAADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDVKGTASTGNPDADAEAAFGQFVAANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGSFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTGDSTTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGSASGG*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0027	cloud	direct	high	1937	0.999	GCA_000520055.1_02853
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2736481	2738142	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	27134	28795	GCA_000520055_1_1_2652	GCA_000520055_1_1_2652	-	5402276	.	PFAM:PF03354.14	Large-Terminase	MIPVWSTACPDWAERLKKGLSIIPDPIYPDEAAHALAIFKQLRIVDAPGSPTFGESCAPWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIMMTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRVTDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQCKAEDMLREAIGGLASRPEGFVVYTTTQSNEPPAGVFRQKLQYARDVRDGKIHDPHFLPVIFEHPPEMVESGAHLLMENLAMVNPNLGYSVDEAFLYREYRKAREAGEEAFRGFMSKHANVEIGLALRSDRWAGADFWEQQGRRVSLDDILQRADVVTVGIDGGGLDDLLGMYVTGRDRETREWLGWGHAWVHETAVVRRKSEASRFQDFVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQILDSLAEAGIPDESVVGISQGWKLGGAIKTTERKLAEGVLIHGDQPLMAWCVGNARVEPKGNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKAYEVFFI*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0028	cloud	direct	high	1661	0.999	GCA_000520055.1_02854
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2738139	2738702	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	28792	29355	GCA_000520055_1_1_2653	GCA_000520055_1_1_2653	-	5402276	.	CDD:COG3728	Small-Terminase	MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDENNLEMPPSAVMSPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKGDAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG*	hallmark_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0029	cloud	direct	high	563	0.998	GCA_000520055.1_02855
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2738991	2739356	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	29644	30009	GCA_000520055_1_1_2654	GCA_000520055_1_1_2654	-	5402276	.	COG1403	5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]. 	MAVLRTLPGRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNLWTLCTECHRQKSAREAAGGMPDPTLPEVSGGSGRADDIIGL*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0030	cloud	direct	high	365	0.997	GCA_000520055.1_02856
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2739398	2739598	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	30051	30251	GCA_000520055_1_1_2655	GCA_000520055_1_1_2655	+	5402276	.	PF13132.6	Domain of unknown function (DUF3950)	MSSKNRPRRTTTRNIRFPNHMIEQINIALEHKGSGNFSAWVIEACRRRLATDATHLRPASMTNNEK*	hhsuite_tools	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0031	cloud	direct	high	200	0.995	GCA_000520055.1_02857
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2739730	2740056	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	30383	30709	GCA_000520055_1_1_2656	GCA_000520055_1_1_2656	-	5402276	.	PRK10819	transport protein TonB; Provisional	MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANYIKGRVDVKFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPRKGVKKTFIFSPSAP*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0032	cloud	direct	high	326	0.997	GCA_000520055.1_02858
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2740395	2740853	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	31048	31506	GCA_000520055_1_1_2657	GCA_000520055_1_1_2657	-	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MLSAFTVILLVVCGALSLGLNHYRDNVITYKAQRDKKARELELANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGVDNATGPRLADTAERDYFILRERLMTMQKQLEGAQDYIRTQCLN*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0033	cloud	direct	high	458	0.998	GCA_000520055.1_02859
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2740999	2741094	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	31652	31747	GCA_000520055_1_1_2658	GCA_000520055_1_1_2658	-	5402276	.	.	hypothetical protein	MKMIKTDWKFLLVWLIPFLWVVARLITAIKG*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0034	cloud	direct	moderate	95	0.99	GCA_000520055.1_02860
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2741091	2741786	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	31744	32439	GCA_000520055_1_1_2659	GCA_000520055_1_1_2659	-	5402276	.	PFAM:PF03374.13	KilA-protein	MKEMISIDHEISMSSLDFLNNIINPARAEAGEVPHEPRKFLAKIEDELELDGTGKKFRLNNNQTRTAYYDLDFDQMMLVGMRESKAVRRSVLARLKAMHGIQIPRTLPEALRFAAKLAEQKAVLENQLAIAAPKAEFVDNYVEASGLMGFREVAKLLGIKETDFRLFLLENGIMYRLAGKMTPYSHHLDAGRFSVKTGEAGNGHAFTQVKFTPKGVQWIAGLLAAWRATAA*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0035	cloud	direct	high	695	0.999	GCA_000520055.1_02861
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2742060	2742593	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	32713	33246	GCA_000520055_1_1_2660	GCA_000520055_1_1_2660	-	5402276	.	CDD:COG3772	lysozyme	MNTKIRYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGAILVDGKPVVPGMKLSKEKCDRVNAIERDKALAWVAKNIRVPLTEPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0036	shell	direct	high	533	0.998	GCA_000520055.1_02862
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2742644	2742988	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	33297	33641	GCA_000520055_1_1_2661	GCA_000520055_1_1_2661	-	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELVVKEINNYPDKIAVTVALEIGGHPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPIILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0037	cloud	direct	high	344	0.997	GCA_000520055.1_02863
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2742993	2743199	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	33646	33852	GCA_000520055_1_1_2662	GCA_000520055_1_1_2662	-	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIREDRRKTARGD*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0038	persistent	direct	high	206	0.995	GCA_000520055.1_02864
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2743492	2745342	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	34145	35995	GCA_000520055_1_1_2663	GCA_000520055_1_1_2663	-	5402276	.	6YP6_A	NanS-p	MSIKHYDVVRAASPSDLAEKLTHKLKEGWQPYGGPVAITPYTLMQAVAIEGEPQVGPSSEPDWYYVIVLAGQSNAMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPRADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSESTGASQDSARWGVGKPLYQDLISRTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSTTVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLMLEINAPAA*	hhsuite_tools	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0039	cloud	direct	high	1850	0.999	GCA_000520055.1_02865
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2745657	2745824	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	36310	36477	GCA_000520055_1_1_2664	GCA_000520055_1_1_2664	-	5402276	.	pfam13064	Protein of unknown function (DUF3927). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are approximately 50 amino acids in length. There is a conserved SVL sequence motif. There is a single completely conserved residue D that may be functionally important.	MTVKLRLAVAALLLFLVVMVDFTSRIMSVLADGVLVCGIVVLLWPVIKRNSLHNA*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0040	cloud	direct	high	167	0.994	GCA_000520055.1_02867
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2745821	2746252	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	36474	36905	GCA_000520055_1_1_2665	GCA_000520055_1_1_2665	-	5402276	.	cd07176	tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	MFGIFGKKARRAAVEIKKFEKRDLAQAVINAAYLVAYADGECEASEKAKIEQILRNQPALSAFTSEINAISATIIGQLDTNFKIGRRAALREIEDVKHDTREAEDVLDVAVAIAEADGEIEPEERKVLEEIAGVLGLRLENHQ*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0041	cloud	direct	high	431	0.998	GCA_000520055.1_02868
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2746442	2746651	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	37095	37304	GCA_000520055_1_1_2666	GCA_000520055_1_1_2666	-	5402276	.	.	hypothetical protein	MFVSEVLMEDKDNKGWVKGWAVVRSSPWHLVGVFATEEDAETEARKMGDKYEVHYGSHRTGSDDFVWGE*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0042	cloud	direct	high	209	0.995	GCA_000520055.1_02869
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2746704	2746928	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	37357	37581	GCA_000520055_1_1_2667	GCA_000520055_1_1_2667	-	5402276	.	.	hypothetical protein	MKKLMVTIGPFETEVSFRVVQGESVLVEDVFHGKSTGPYVKEYLIDATDENIEVVYDSVNHPDLIIKAKLKPLY*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0043	cloud	direct	high	224	0.996	GCA_000520055.1_02870
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2747785	2748711	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	38438	39364	GCA_000520055_1_1_2668	GCA_000520055_1_1_2668	+	5402276	.	.	hypothetical protein	MKVRSIGFTINNNNKNINTVDVMNAFINASNREHSRTDYTRKILISDVNDFYYGLVVTFRNQKKNCKSQFVDGKFQLKIEDLQGSDKLANFNFFLIKKSNLSGLYMYHHGSCSLNTLFSHLETISNEFIRNQNKEEIKKLGDKPKQKEVTAINKKYKERLTFSLMTNKNNIQSVLCQFKEIKSTSFKFNYIDFKGGPMTALEQFVNTTTIDMNFNSSDRTKVQQLSQNLSNIYNSMSGVAKAQVIAVNHAGIEKTIDFMNCPVFFETYDFDIIADKVNGLTNDNYTTNPVFDMIKEEMLNGTNKNAFI*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0044	cloud	direct	high	926	0.999	GCA_000520055.1_02874
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2748698	2749246	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	39351	39899	GCA_000520055_1_1_2669	GCA_000520055_1_1_2669	+	5402276	.	.	hypothetical protein	MPLYEWLINKRLRYQYLTLLAFSILALLALYLLYRNTPKVSVNFFDFYHKNLRGYLFSGFISVGSFLLSLHTFVIINLRDKVFATQEYKEIYSIATGIPIDKINDSVLYKPLDNLSSFINTSILCSITTAIAQFTIGLSTNLYACLFCVWLAILTVFLLLHCLIIIRQNIKILLKQQRKKGG*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0045	cloud	direct	high	548	0.998	GCA_000520055.1_02875
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2749259	2749600	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	39912	40253	GCA_000520055_1_1_2670	GCA_000520055_1_1_2670	-	5402276	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRDMYEVLDRWGAWAAADNSGVDWQPVAAGFKGLLPHGKKTRQQCDDDEGIMIDSCVARLRKYKPEEYELVIAHFVIGISLRTIAKKQKCSDGTIRKELQTALGFLDGVLSML*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0046	cloud	direct	high	341	0.997	GCA_000520055.1_02876
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2749618	2750607	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	40271	41260	GCA_000520055_1_1_2671	GCA_000520055_1_1_2671	-	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRALLPPEIAPRMGIVLFRLGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPVVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLIRNDLADALPESAARKALRLPKPVVPSVTRESDLVPSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMATKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0047	shell	direct	high	989	0.999	GCA_000520055.1_02877
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2750617	2751132	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	41270	41785	GCA_000520055_1_1_2672	GCA_000520055_1_1_2672	-	5402276	.	.	hypothetical protein	MRITPPHLQPVLSRVKRFVERMPEGATLTQISQKVQAYSLLNKRDKEILIGIIRDSGLLVVANDGRTTTLHHPKFGHQAVNSEIPVKTEEPVVIKKTVTPDELRRHAEELIRAAEEAEKKFNDRAEIKKQLDPLRLEILQAYGMASRKFDEFVDAMADMGKAVQKLKQIVL*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0048	cloud	direct	high	515	0.998	GCA_000520055.1_02878
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2751148	2751957	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	41801	42610	GCA_000520055_1_1_2673	GCA_000520055_1_1_2673	-	5402276	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MNNLMVIDGIEVRRDAYGRYSLNDLHRAAVASGANARTKEPGKFLSSQQTVELVHELTNTQNLGVDPVSVIHGGNERGTYVCKELVYAYAMWISPSFHLKVIRTFDMVTSAPEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNLAPRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMAKLGIVEQRERYSRTAINNIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESRFPELLKLLDTVH*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0049	shell	direct	high	809	0.999	GCA_000520055.1_02879
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2751977	2752366	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	42630	43019	GCA_000520055_1_1_2674	GCA_000520055_1_1_2674	-	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAIVEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVIPEGKVEITISKYEKTAGAAA*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0050	shell	direct	high	389	0.997	GCA_000520055.1_02880
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2752363	2752689	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	43016	43342	GCA_000520055_1_1_2675	GCA_000520055_1_1_2675	-	5402276	.	TIGR00498	SOS regulatory protein LexA. LexA acts as a homodimer to repress a number of genes involved in the response to DNA damage (SOS response), including itself and RecA. RecA, in the presence of single-stranded DNA, acts as a co-protease to activate a latent autolytic protease activity (EC 3.4.21.88) of LexA, where the active site Ser is part of LexA. The autolytic cleavage site is an Ala-Gly bond in LexA (at position 84-85 in E. coli LexA; this sequence is replaced by Gly-Gly in Synechocystis). The cleavage leads to derepression of the SOS regulon and eventually to DNA repair. LexA in Bacillus subtilis is called DinR. LexA is much less broadly distributed than RecA. [DNA metabolism, DNA replication, recombination, and repair, Regulatory functions, DNA interactions]	MTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKRGVARGITLHTAVKDDDSEAVGIIRSLLAGEENARLRATHWLHERGLKV*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0051	shell	direct	high	326	0.997	GCA_000520055.1_02881
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2752686	2753339	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	43339	43992	GCA_000520055_1_1_2676	GCA_000520055_1_1_2676	-	5402276	.	TIGR01712	phage N-6-adenine-methyltransferase. This model is a fragment-mode model for a phage-borne DNA N-6-adenine-methyltransferase. [Mobile and extrachromosomal element functions, Prophage functions, DNA metabolism, Restriction/modification]	MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0052	shell	direct	high	653	0.998	GCA_000520055.1_02882
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2753339	2753827	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	43992	44480	GCA_000520055_1_1_2677	GCA_000520055_1_1_2677	-	5402276	.	PFAM:PF14557.5	transcriptional-activator	MSLLNDVQKFIEAHPGCTSGDIADAFTGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFPRLTERAQEPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNFVGA*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0053	shell	direct	high	488	0.998	GCA_000520055.1_02883
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2753830	2754771	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	44483	45424	GCA_000520055_1_1_2678	GCA_000520055_1_1_2678	-	5402276	.	PFAM:PF04492.12	Replication-protein-O	MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGNRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDQSKFDASKSGKKAGFHPSESGGDPSVKSKHDPSDKKTSRPDASQPDTQTAEQEFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKSSYDNVDYSQIPAGFRG*	rep_hall_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0054	shell	direct	high	941	0.999	GCA_000520055.1_02884
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2754781	2755119	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	45434	45772	GCA_000520055_1_1_2679	GCA_000520055_1_1_2679	-	5402276	.	.	hypothetical protein	MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVLCNKLTAGSKITTECPSESFVGNRKHNGLSTSAKAMSMSASARSNSFVVNSGK*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0055	shell	direct	high	338	0.997	GCA_000520055.1_02885
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2755116	2755700	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	45769	46353	GCA_000520055_1_1_2680	GCA_000520055_1_1_2680	-	5402276	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MGKEPEWKVDKQPAWLVAAIRRTIADLPHGYEEAAEILGLYKSDDITPAKDQLHNRLRSGGDQIFPLEWAMVLQDASGTRHVTDAIARRSNGVFVPLVDIDDIDNGDINQRLMESIEWIGKHSQYLRKATADGVIDQAEREQIEENSYQVMAKWQEHLTLLFRVFCAPEKSNARECAAPGVVASIASGCGETNA*	phrogs_hmm	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0056	cloud	direct	high	584	0.998	GCA_000520055.1_02886
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2755729	2755992	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	46382	46645	GCA_000520055_1_1_2681	GCA_000520055_1_1_2681	-	5402276	.	PFAM:PF10078.8	transcriptional-repressor	MSSQNYTEKAVKAAGKSLSEVARRFGFKSTQSVANWVINNQVPSERVLQLCELGNWSVTPHELRPDIYPNPNDGLPECYSKVSGSTA*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0057	cloud	direct	high	263	0.996	GCA_000520055.1_02887
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2756339	2756803	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	46992	47456	GCA_000520055_1_1_2682	GCA_000520055_1_1_2682	+	5402276	.	PDB:2FJR_A	Repressor-protein-CI	MASIPNPTKPDVYRIEVLDLSVSAGPGTYMLSDYVDVLYAIEFTTEHARSLFGNRSQNDIKVMTVNGDSMSPTLVSGDRLFVDISVRHFQTDGVYSFVYGKTFHVKRLQMQGNKLAVLSDNPAYEKWYIDEKSQDQLYVMGKALIHESIKYNRL*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0058	cloud	direct	high	465	1.0	GCA_000520055.1_02888
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2757037	2758122	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	47690	48775	GCA_000520055_1_1_2683	GCA_000520055_1_1_2683	+	5402276	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MINERTEATDGVADMISTNTKYLVWNNKGGVGKTFLTYNLAVEFAISHPDQDVVVIDSCPQSNVSEIILGGNGTGEENLNKLRDRNVTIAGYIKERFSKSPLSRLGNESSYFVRAHDVNAKMPENLYILPGDVDLDICSRLISHIGSSPVKEAWKKSRSLLVDLIASFEADKNISDRAKTFFIDCNPSFASYTELGVVAANRIIIPCTADAASIRGIKNLVKLIYGVSIDKSEQDEMFLDFNKEAKQNLIELPELHLFVQNRSRTNESDAAKAFKSHAEEIKRITDDLLNTHPHLFTNVATFERVQNVKDGNTLAAIINHEGCPLSRLQHKSYTIYGMATQANRAQIEALESDVSTVVKCL*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0059	cloud	direct	high	1085	0.999	GCA_000520055.1_02889
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2759055	2759417	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	49708	50070	GCA_000520055_1_1_2684	GCA_000520055_1_1_2684	+	5402276	.	.	hypothetical protein	MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0060	shell	direct	high	362	0.997	GCA_000520055.1_02890
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2759483	2760307	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	50136	50960	GCA_000520055_1_1_2685	GCA_000520055_1_1_2685	+	5402276	.	COG5532	Uncharacterized conserved protein YfdQ, DUF2303 family [Function unknown]. 	MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0061	shell	direct	high	824	0.999	GCA_000520055.1_02891
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2760435	2760971	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	51088	51624	GCA_000520055_1_1_2686	GCA_000520055_1_1_2686	+	5402276	.	PFAM:PF12917.6	deoxyribonucleoside-5'-monophosphate-phosphatase	MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNELSELRKCA*	phrogs_hmm	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0062	shell	direct	high	536	0.998	GCA_000520055.1_02892
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2760962	2761324	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	51615	51977	GCA_000520055_1_1_2687	GCA_000520055_1_1_2687	+	5402276	.	PF04448.12	Protein of unknown function (DUF551)	MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWIFQVGDLENVNITHWAVMPKAPENKK*	hhsuite_tools	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0063	shell	direct	high	362	0.997	GCA_000520055.1_02893
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2761321	2761524	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	51974	52177	GCA_000520055_1_1_2688	GCA_000520055_1_1_2688	+	5402276	.	.	hypothetical protein	MSVIKTHTGIVITRDGPQVKKLHQTKRMWVVGKNEFYHKETGRRHFAENTRRRLLLDTIKPIEVKHV*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0064	cloud	direct	high	203	0.995	GCA_000520055.1_02894
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2761517	2761756	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	52170	52409	GCA_000520055_1_1_2689	GCA_000520055_1_1_2689	+	5402276	.	.	hypothetical protein	MFKQNEKAIAQIADYIPRACRGMQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTRESFFSRIAAQIRKGGNQ*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0065	cloud	direct	high	239	0.996	GCA_000520055.1_02895
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2761753	2762304	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	52406	52957	GCA_000520055_1_1_2690	GCA_000520055_1_1_2690	+	5402276	.	pfam13935	Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	MSEINYQALRLAAENATPGEWCADDYHGVIADAGLNANYYIASCSGPDNRANKRFIAAANPATVLALLDELEAAEKRNAELQSENAYIRNRYKELDLLIGKNILVMQTAIIEWQATGDAKSGLAWIYNTLFGPGELPDESEKDAQAYFNRKYAPIDEKLMALHKWFWEQSEAERAAGARIKGG*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0066	cloud	direct	high	551	0.998	GCA_000520055.1_02896
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2762261	2762497	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	52914	53150	GCA_000520055_1_1_2691	GCA_000520055_1_1_2691	+	5402276	.	.	hypothetical protein	MKQSAPQALALKEGEKVNRTIIVTTVISVPANAPHQDIDDFVESKFGQDKDMKPDNLCYGDVTEIISHHWEYGSHYMN*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0067	cloud	direct	high	236	0.996	GCA_000520055.1_02897
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2762588	2763064	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	53241	53717	GCA_000520055_1_1_2692	GCA_000520055_1_1_2692	+	5402276	.	6V7V_D	Quorum sensing anti-activator Aqs1	MQDIKENIRQQLYGFYIAYDLWLKNGAKPGGVFSQNYGLCANLFDYLTLIGTPCEAALEQLHADFRSAGLNEALPFNEGKEHYHEERGHNMCHMNPARVAWVRAQTGQPAPEGLVKAVRFYEQVKRENPPVETGAWKDAVDWVFKEACQAVNIRIKGE*	hhsuite_tools	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0068	cloud	direct	high	476	0.998	GCA_000520055.1_02898
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2763258	2763848	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	53911	54501	GCA_000520055_1_1_2693	GCA_000520055_1_1_2693	+	5402276	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MTTFTNSKLTDEYVSNATLIRLILWADQHNSHYVVAALRELQERRKADSAEPGSQTYKLPVNTPCQDAPAHIWLQTAGVWPEDGELSELTWCSHNQHHDDTLYVRADLVNGNYPATPDGWISCSERMPEMGERQCYVLAADFKNNYPPNIPNTQVGVYGDWFNDGKPTWDDGDGEDLYLKEVTHWMQLPEPPQEVK*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0069	cloud	direct	high	590	0.998	GCA_000520055.1_02899
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2763936	2764178	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	54589	54831	GCA_000520055_1_1_2694	GCA_000520055_1_1_2694	+	5402276	.	PF13973.6	Domain of unknown function (DUF4222)	MFALIQRGQIYTDRAGYPVVITRSTQHSVFFRRMDGRSGRVRIGEFNNLFEHIDQQEYRKILAGTEQEMRLKKLRAMQRR*	hhsuite_tools	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0070	cloud	direct	high	242	0.996	GCA_000520055.1_02900
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2764182	2764316	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	54835	54969	GCA_000520055_1_1_2695	GCA_000520055_1_1_2695	+	5402276	.	.	hypothetical protein	MHTAFEFWVRKTFGNRYDLTRDVDGFYCREVVKRMFDVWCHCRG*	.	hypothetical_protein	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0071	cloud	direct	high	134	0.993	GCA_000520055.1_02901
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2764335	2764589	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	54988	55242	GCA_000520055_1_1_2696	GCA_000520055_1_1_2696	+	5402276	.	pfam06806	Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	MQTIIYQITPSKWCTERVLIASTGLKPGTIERARRKSWMQGKEYRHYAVEGDPGHYSECLYNIEEIMRWIENQKQPGAKNASSG*	mmseqs_cdd	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0072	cloud	direct	high	254	0.996	GCA_000520055.1_02902
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2764623	2765909	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	55276	56562	GCA_000520055_1_1_2697	GCA_000520055_1_1_2697	+	5402276	.	PDB:1Z19_B	Integrase	MSNASYPTGVENHGGSLRIWFHYNGKRVRENLGVPDTAKNRKIAGELRTSVCFAIRMGSFDYAAQFPNSPNLKHFGLGKREITVKALSEKWLDLKKIEICANALNRYQSVIKNMLPMLGEKKLVSSITKEDLLFVRRDLLTGYQKLSNGKTSSIKGRSVVTVNYYMTTIAGMFQFATDNGYTSGNPFNGLAPLKKSKVKPDPLTRDEFIRFIEACRHQQTKNLWILAVYTGIRHGELVSLAWEDIDLKARTITIRRNYTKLGEFTPPKTDAGTGRTIHLVQPAIDALKSQAEMTMLGKQHSVEVKQREYGRTAVHKCTFVFSPQVTKQQQLSGPHYKVDSIRESWTSILKRAGLRHRKSYQSRHTYACWSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLNKRLSESVPCMPHKKAG*	common_virus_hmm	common_virus	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0073	cloud	direct	high	1286	0.999	GCA_000520055.1_02903
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2765984	2766631	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	56637	57284	GCA_000520055_1_1_2698	GCA_000520055_1_1_2698	+	5402276	.	PRK15043	HTH-type transcriptional regulator MlrA. 	MLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFPLGI*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0074	persistent	direct	high	647	0.998	GCA_000520055.1_02904
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	CDS	2766691	2766798	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	57344	57451	GCA_000520055_1_1_2699	GCA_000520055_1_1_2699	+	5402276	.	PRK13681	protein YohO. 	MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG*	mmseqs_cdd	nonviral_gene	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_CDS_0075	persistent	direct	high	107	0.991	GCA_000520055.1_02905
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3274505	3275383	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	1	879	GCA_000520055_1_1_3145	GCA_000520055_1_1_3145	+	5402276	.	PRK03378	inorganic polyphosphate/ATP-NAD kinase; Provisional	MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0001	persistent	direct	high	878	0.999	GCA_000520055.1_03385
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3275469	3277130	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	965	2626	GCA_000520055_1_1_3146	GCA_000520055_1_1_3146	+	5402276	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPETLPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALETARALHQQRQHYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLGGSEVTRNTLANAKELLAA*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0002	persistent	direct	high	1661	0.999	GCA_000520055.1_03386
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3277279	3277620	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	2775	3116	GCA_000520055_1_1_3147	GCA_000520055_1_1_3147	+	5402276	.	PRK11548	outer membrane protein assembly factor BamE. 	MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0003	persistent	direct	high	341	0.997	GCA_000520055.1_03387
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3277682	3277972	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	3178	3468	GCA_000520055_1_1_3148	GCA_000520055_1_1_3148	-	5402276	.	PRK01777	RnfH family protein. 	MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0004	persistent	direct	high	290	0.997	GCA_000520055.1_03388
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3277962	3278438	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	3458	3934	GCA_000520055_1_1_3149	GCA_000520055_1_1_3149	-	5402276	.	PRK10724	type II toxin-antitoxin system RatA family toxin. 	MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0005	persistent	direct	high	476	0.998	GCA_000520055.1_03389
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3278570	3279052	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	4066	4548	GCA_000520055_1_1_3150	GCA_000520055_1_1_3150	+	5402276	.	PRK05422	SsrA-binding protein SmpB. 	MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0006	persistent	direct	high	482	0.998	GCA_000520055.1_03390
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3279228	3279353	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	4724	4849	GCA_000520055_1_1_3151	GCA_000520055_1_1_3151	+	5402276	.	.	hypothetical protein	MALINLVYLPLHIGADSGFDGICETQGACRGAVGLVKSRKK*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0007	persistent	direct	high	125	0.992	GCA_000520055.1_03391
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3279901	3280149	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	5397	5645	GCA_000520055_1_1_3152	GCA_000520055_1_1_3152	+	5402276	.	PRK10597	DNA damage-inducible protein I; Provisional	MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWKSADEWFVH*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0008	cloud	direct	high	248	0.996	GCA_000520055.1_03393
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3280742	3281392	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	6238	6888	GCA_000520055_1_1_3153	GCA_000520055_1_1_3153	+	5402276	.	pfam06416	Effector protein NleG. Many bacterial pathogens deliver effector proteins into host cells via a type III secretion system. These effector proteins then alter the host cell's biology in ways that are advantageous to the pathogen. The NleG protein and its homologs form the largest family of effector proteins in the enterohemorrhagic Escherichia coli O157:H7, with 14 members identified in the Sakai strain alone.	MPIFLNFTAGSILPENELASLRYIVQQNQNDTVIIKERYKMDIRYIESVNGFTVNPVCSNHFSIFMARQNTIARNLEQQINNGRSFAQISQDFMLQLSSNIGWKKGAENALKNKIHSHSFVVNPDEFSCDTQFLKCPITLCVPEKGVFVKNALNSNICTLYDKSAFMNLTREHLPHPLSREKIVKEMIIERNMCYFDTISQHFIIMDADQQKQHCK*	mmseqs_cdd	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0009	cloud	direct	high	650	0.998	GCA_000520055.1_03394
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3281617	3282492	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	7113	7988	GCA_000520055_1_1_3154	GCA_000520055_1_1_3154	-	5402276	.	PFAM:PF11713.7	T3SS-secreted-effector-Ibe	MFSIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILGQNVSRVTTGKKPYDLLFLNDATKQDFDERKMEFTYPGANKSHLQSSNSDVVAAAAISITATEMKTILPDDLTPGKYKKIYLSGDGSAGLPLLKCGDEFLSPTDIVDRIVQHNLHEIDDIRLTSCNSANILKNKDFSPDEIEKSANMNNGWLARALFGQKSSLAEHVYAEFERRGINVSISGYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE*	phrogs_hmm	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0010	cloud	direct	high	875	0.999	GCA_000520055.1_03395
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3282633	3282902	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	8129	8398	GCA_000520055_1_1_3155	GCA_000520055_1_1_3155	-	5402276	.	pfam06820	Putative prophage tail fibre C-terminus. This family represents the C-terminus of a prophage tail fibre protein found mostly in E. coli. All family members contain a conserved RLGP motif.	MNILKKLMQRLCGCGKHDDREHGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0011	cloud	direct	high	269	0.996	GCA_000520055.1_03396
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3282971	3283297	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	8467	8793	GCA_000520055_1_1_3156	GCA_000520055_1_1_3156	+	5402276	.	PFAM:PF06504.10	Replication-protein-C	MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0012	shell	direct	high	326	0.997	GCA_000520055.1_03397
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3283297	3284184	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	8793	9680	GCA_000520055_1_1_3157	GCA_000520055_1_1_3157	+	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0013	shell	direct	high	887	0.999	GCA_000520055.1_03399
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3284187	3285530	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	9683	11026	GCA_000520055_1_1_3158	GCA_000520055_1_1_3158	-	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVDGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESLQSAAEAELSRKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAEDAVNRIPTVVGPPGPEGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFQHLQVRFGDGPWQDVKGLDEVGSDTGRTEPPRVSWRVFYL*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0014	cloud	direct	high	1343	0.999	GCA_000520055.1_03400
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3285595	3286194	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	11091	11690	GCA_000520055_1_1_3159	GCA_000520055_1_1_3159	-	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNAPGSDNLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0015	shell	direct	high	599	0.998	GCA_000520055.1_03401
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3286261	3289737	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	11757	15233	GCA_000520055_1_1_3160	GCA_000520055_1_1_3160	-	5402276	.	PFAM:PF13550.5	tail-protein	MGKGGGKAHTPVEAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAVPATIELTPGYFQITAVPRLAVYDPTVQFEFWFSETKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAFVEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKNGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0016	cloud	direct	high	3476	1.0	GCA_000520055.1_03402
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3289978	3290556	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	15474	16052	GCA_000520055_1_1_3161	GCA_000520055_1_1_3161	-	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKVPEYKSTDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGDGKVVVIGRG*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0017	cloud	direct	high	578	0.998	GCA_000520055.1_03403
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3290553	3291296	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	16049	16792	GCA_000520055_1_1_3162	GCA_000520055_1_1_3162	-	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALSWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFEREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQAGDILLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0018	persistent	direct	high	743	0.999	GCA_000520055.1_03404
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3291307	3292005	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	16803	17501	GCA_000520055_1_1_3163	GCA_000520055_1_1_3163	-	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQNIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEAVTWQGREYQAYPIDGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELRDRWVVEQMSELTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRSDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCEMRGMVANFGGFLSINKLSQ*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0019	cloud	direct	high	698	0.999	GCA_000520055.1_03405
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3292005	3292346	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	17501	17842	GCA_000520055_1_1_3164	GCA_000520055_1_1_3164	-	5402276	.	PFAM:PF05939.12	minor-tail-protein	MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNPQLKTFQAVFRVTDESTRRWLDEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYSDFSCTIEQVVN*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0020	cloud	direct	high	341	0.997	GCA_000520055.1_03406
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3292339	3295581	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	17835	21077	GCA_000520055_1_1_3165	GCA_000520055_1_1_3165	-	5402276	.	PFAM:PF06120.10	Tail-length-tape-measure-protein	MATLRELIIKISANSQSFQSEIQRASRMGSEYYRTLQNGGRQAAAAAREQRRALAELHSQLTEIRASAVGMTGAFAGAFATGHLISLADEWSSVNARLKQASQSSDEFASSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVTEAISTGLKISGASTAEAGSVITQFSQALAQGVLRGEEFNSVNESGDRIVRALAAGMGVARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSSSITKVENAFMAWVGGANEASGVTKTLSGMLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAMSATAGLVTAARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNRNIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQARESARQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQYVLANPGWTTGDGFMINHLTSVKTVTEGLSQATEQLAVEQSRLAQMQEKAQSIQDVLAGLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRLPQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDPYQEARQRYISNALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALVGQNTELAKLKYQTALGELKTLTEMQKQELLRNATLIDQQKIREQLRSREETLKNENAAARASNDAELLGYGQGERARERMRELQQIRDSFRQKDADLQSQYQSGDISEDFYRQALAQNAQYLSERLKDQETFYAESDAQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNKVEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFLGSIGDWLGGAVANAKGGVYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMNGSAGLVYSPVYHIAIQNDGANGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0021	cloud	direct	high	3242	1.0	GCA_000520055.1_03407
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3295633	3295842	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	21129	21338	GCA_000520055_1_1_3166	GCA_000520055_1_1_3166	-	5402276	.	PFAM:PF06223.11	tail-protein	MWMEFDRVSPLGDERGDIRNAQIVKAVFGAQGMNVALKDAMLCWGEDEDKPEVDPFAALEDALSLAAMS*	phrogs_hmm	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0022	cloud	direct	high	209	0.995	GCA_000520055.1_03408
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3295938	3296312	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	21434	21808	GCA_000520055_1_1_3167	GCA_000520055_1_1_3167	-	5402276	.	pfam06222	Phage tail assembly chaperone. 	MKKDLKTLALARLSGFRHKTVKVPEWRNVSVVLREPSAEAWYLWQEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGPVHARLLRQALELIADAESARKK*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0023	cloud	direct	high	374	0.997	GCA_000520055.1_03409
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3296327	3297043	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	21823	22539	GCA_000520055_1_1_3168	GCA_000520055_1_1_3168	-	5402276	.	PFAM:PF16463.4	Tail-tube-protein	MSALYERSLLTQVMISSAPATAETMDKAEYLRLDCAIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNPEKTLTVNTGALLTMSVSVNGGTPPYKYAWKKDGQPVEGQTTDTFSKANAQSGDAGKYTCVVTDSAEKAQSVTSVECTVTVSAAAG*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0024	cloud	direct	high	716	0.999	GCA_000520055.1_03410
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3297111	3297455	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	22607	22951	GCA_000520055_1_1_3169	GCA_000520055_1_1_3169	-	5402276	.	PFAM:PF05657.10	tail-component	MTEADLYPYLAHLAGGQVYPYVVPLLDGRPSVALPWVVFSLISSVSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENRCYRATLEFQVTV*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0025	cloud	direct	high	344	0.997	GCA_000520055.1_03411
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3297452	3297898	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	22948	23394	GCA_000520055_1_1_3170	GCA_000520055_1_1_3170	-	5402276	.	PFAM:PF04883.11	tail-component	MIETLLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEEVVSRAPVRRGKLRRNVVVLSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0026	cloud	direct	high	446	0.998	GCA_000520055.1_03412
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3297895	3298245	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	23391	23741	GCA_000520055_1_1_3171	GCA_000520055_1_1_3171	-	5402276	.	CDD:COG5614	Head-Tail-Connector-protein	MAISAGRLTQMISVLKPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0027	cloud	direct	high	350	0.997	GCA_000520055.1_03413
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3298256	3298582	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	23752	24078	GCA_000520055_1_1_3172	GCA_000520055_1_1_3172	-	5402276	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELIQGELPFSVSVLIYDLRCPTVL*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0028	cloud	direct	high	326	0.997	GCA_000520055.1_03414
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3298579	3300288	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	24075	25784	GCA_000520055_1_1_3173	GCA_000520055_1_1_3173	-	5402276	.	PDB:5JBL_C	Prohead-core-protein-protease	MTERELSIIRALGEEFSTVLADLQRTFEGKMASQAQAFEEKLTSLSAVLQKHVTVDEVRPVLQAMVDDAVGAIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPAPRDGRDYDPEVLKQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQKAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLKQAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPEVLQKAVNDAVANIPVPADGKSITPDDVRPMLEQMVKEAVSHIPVPRDGRDYDPDVLQKAVLDAVRALPAPQDGRDATALEIIPAIDDQKSFPRGTYATHQGGLWRAYEKTHGMRGWECLVDGVADIDVSMTGERSFTVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTVTWGGSLWHCNSMTGDKPGEAHSSGWTLAAKRGRDAGGGK*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0029	cloud	direct	high	1709	0.999	GCA_000520055.1_03415
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3300285	3301649	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	25781	27145	GCA_000520055_1_1_3174	GCA_000520055_1_1_3174	-	5402276	.	PDB:3KDR_A	Portal-Protein	MWNFLRRTRKNQKSGRDVKEVGWTSLFQAVVEPFAGAWQQGVKADPESVLSFHAVFSCISLISQDIAKMRLRLMQTDTQGIRREKRQGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNSRGQIKELRILDWSRVEPLVADDGEVFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLVGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGESVKNTLLTPNEARKRENLPPLAGGDALYLQQQNYSLEALSRRDAREDPFASSGKRVSAQLPDGASDGNKAISETEHGAVKAMLRGILRK*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0030	cloud	direct	high	1364	0.999	GCA_000520055.1_03416
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3301861	3303798	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	27357	29294	GCA_000520055_1_1_3175	GCA_000520055_1_1_3175	-	5402276	.	PDB:8ECN_B	Major-Capsid-Protein	MTLKRACSLLTVKSFSEDERVITGIASTPSPDRDGDILEPEGAEFGSTIPFLWQHDHSRPVGQCTVRRVREGLEITAMLVKPEPGMPSQMAARLDEAWAAIKTGLVRGLSVGFRPHEYTYLDGGGLHFLRWELMEVSAVTVPANAECTIRTIKSFGSPFSAASGNRRPVVKIASSAGASAQSITSFHKEKSAMNTGEQIKSFENKRAALAASLEEIMNKAAEEGRTLDVEEEEHYDNTAAEIRQVDAHLKRLRELEAGKAATAQPVKQAGNGNVATVASAPVIRVEQKLEKGIGFARFAKSLAAAKGVRSEALEVARRQYPDDSRLHHVLKSAVGAGTTTDPQWAGSLSEYQEYAQDFIDYLRPQTIIGRFGQGGIPALRLVPFNIRVHAQVSGGAAGWVGEGKARPLTKFDFESITFSHAKVSAIAVLTEELIRFSSPAADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDVKGTASTGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGTFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPGGDSTTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGSASGG*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0031	cloud	direct	high	1937	0.999	GCA_000520055.1_03417
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3303862	3305523	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	29358	31019	GCA_000520055_1_1_3176	GCA_000520055_1_1_3176	-	5402276	.	PFAM:PF03354.14	Large-Terminase	MIPVWSTACPDWAERLKKGLSIIPDPIYPDEAAHALAIFKQLRIVDAPGSPTFGESCAPWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIMMTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRVTDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQCKAEDMLREAIGGLASRPEGFVVYTTTQSNEPPAGVFRQKLQYARDVRDGKIHDPHFLPVIFEHPPEMVESGAHLLMENLAMVNPNLGYSVDEAFLYREYRKAREAGEETFRGFMSKHANVEIGLALRSDRWAGADFWEQQGRRVSLDDILQRADVVTVGIDGGGLDDLLGMYVTGRDRETREWLGWGHAWVHETAVVRRKSEASRFQDFVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQILDSLAEAGIPDESVVGISQGWKLGGAIKTTERKLAEGVLVHGGQPLMAWCVGNARVEPKGNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKAYEVFFI*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0032	cloud	direct	high	1661	0.999	GCA_000520055.1_03418
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3305520	3306083	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	31016	31579	GCA_000520055_1_1_3177	GCA_000520055_1_1_3177	-	5402276	.	CDD:COG3728	Small-Terminase	MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDETNPEMPPPVVISPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKGDAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG*	hallmark_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0033	cloud	direct	high	563	0.998	GCA_000520055.1_03419
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3306375	3306740	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	31871	32236	GCA_000520055_1_1_3178	GCA_000520055_1_1_3178	-	5402276	.	COG1403	5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]. 	MAVLRTLPGRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNLWTLCTECHRQKSAREAAGGMPDPTLPEVSGGHGRADDIIGL*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0034	cloud	direct	high	365	0.997	GCA_000520055.1_03420
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3306782	3307009	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	32278	32505	GCA_000520055_1_1_3179	GCA_000520055_1_1_3179	+	5402276	.	PF13132.6	Domain of unknown function (DUF3950)	MSSKNRPRRTTTRNIRFPNQMIEQINIALDQKGSENFSAWVIESCRRELAADIKYARQLTIKKNDTQYALRWLFI*	hhsuite_tools	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0035	cloud	direct	high	227	0.996	GCA_000520055.1_03421
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3307372	3307839	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	32868	33335	GCA_000520055_1_1_3180	GCA_000520055_1_1_3180	-	5402276	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MNRVLCVVIIVLAVGCGALWLATNHYRDNALTYKAQRDKKARELEQANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGVDNATGPRLADTAERDYFILRERLMTMQKQLEGAQDYIRTQCLN*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0036	cloud	direct	high	467	0.998	GCA_000520055.1_03422
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3307847	3307993	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	33343	33489	GCA_000520055_1_1_3181	GCA_000520055_1_1_3181	-	5402276	.	.	hypothetical protein	MGWLMISDKLITLVKSLCVLVGISFLVMLVAIFFSTAWRVLTLSGLVG*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0037	cloud	direct	high	146	0.993	GCA_000520055.1_03423
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3307993	3308562	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	33489	34058	GCA_000520055_1_1_3182	GCA_000520055_1_1_3182	-	5402276	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNMMAVPFHGNSLYVVNHNGEPYVPMKPVVAGMGLAWQSQLAKLRQRFASTITEIVMVAEDGKQRNMVSMPLRKLAGWLQTINPNKVKPEIRDKVIRYQEECDDVLYEYWTKGFVVNPRKMSVMEELNQACADMKRDKNIASVFATGLNEWKQVKAAHVSKIRTLVNEAHMLIDFVLADTGKGKITKAD*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0038	cloud	direct	high	569	0.998	GCA_000520055.1_03424
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3308833	3309366	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	34329	34862	GCA_000520055_1_1_3183	GCA_000520055_1_1_3183	-	5402276	.	CDD:COG3772	lysozyme	MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLTEPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0039	shell	direct	high	533	0.998	GCA_000520055.1_03425
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3309417	3309761	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	34913	35257	GCA_000520055_1_1_3184	GCA_000520055_1_1_3184	-	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0040	cloud	direct	high	344	0.997	GCA_000520055.1_03426
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3309766	3309981	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	35262	35477	GCA_000520055_1_1_3185	GCA_000520055_1_1_3185	-	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMEKITTGVSYTTSAVGTGYWLLQLLDKVSPSQWVAIGVLGSLLFGLLTYLTNLYFKIKEDRRKAARGE*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0041	persistent	direct	high	215	0.995	GCA_000520055.1_03427
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3310131	3311984	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	35627	37480	GCA_000520055_1_1_3186	GCA_000520055_1_1_3186	-	5402276	.	6YP6_A	NanS-p	MSIKHYDVVRAASPSDLAEKLTHKLKEGWQPYGGPVAITPYTLMQAVAIEGDPQVGPSSEPDWFYVVVLAGQSNGMAYGEGLPLPDSYDAPDPRIKQLARRSTVTPGGAACRYNDIIPADHCLHDVQDMSTLNHPKADLSKGQYGCVGQGLHIAKKLLPYIPNNAGILLVPCCRGGSAFTQGAEGTFSADTGASQDSARWGVGKPLYQDLIARTKAALQKNPKNVLLAVCWMQGEFDMSAATHAQQPALFTAMLTQFRADLSVFNAQCHGGSAADVPWICGDTTYYWKNTYATQYDTVYGGYKNRESEGVYFVPFMTDGNGVNTATNAPAEDPDIPASGYYGAASRTNGNQVSSNRPTHFSSWARRSIIPDRLATAILNAAGRTSAFISGKAPEIKPSPGGNTPSGPSADTSVRTISLLPAAGEAAAQGWSIKDGGIQLSDGVFKITKQSNKTWSLTHPVDDAITLLTQGGRLTCKFRLSGALTNNQFGLGIYLYTDAPVPDGVAMTGTGNPFLMSYFTQTTDGRVNLMHHRKAGNTKLGEFGDYGNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLTLGLNALTLTDVTKNAAYGVEIESLVLEINAPASS*	hhsuite_tools	nonviral_gene	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0042	cloud	direct	high	1853	0.999	GCA_000520055.1_03428
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3312529	3313272	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	38025	38768	GCA_000520055_1_1_3187	GCA_000520055_1_1_3187	-	5402276	.	.	hypothetical protein	MLSSCIGVVMKDGALLRSSSLFIAYMGCLGWGSAYFYGWGTSFYYGFPWWIVGAGVDDVARSLFFAVIVIAIFLIGWGIGVVFFFAVKRKHSMQELNVFRLYFAVELLFVPAIIEFSILRQKIQVPLLLLSAAIALAVTISIRSYGRFLSVSCFYDKPFIKKHFFEIVMIAFVAYFWLFSFLTGYYKPQFKKEYEMINYNDGWYYVLARYDNCLVLSTSFNAGSKRFVIYQSAQDKNLQVDIVRTRI*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0043	cloud	direct	high	743	0.999	GCA_000520055.1_03429
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3313525	3314148	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	39021	39644	GCA_000520055_1_1_3188	GCA_000520055_1_1_3188	-	5402276	.	pfam03589	Antitermination protein. 	MRLESVAKFHSPKSPMMSDSPRATASDSLSGTDVMAAMGMAQSQAGFGMAVFCGKHELSQNDKQKAINYLMQFAHKVSGKYRGVAKLEGNTKAKVLQVLATFAYADYCRSAATPGARCRDCHGTGRAVDIAKTEQWGIVAEKECGRCKGVGYSRMPASAAYRAVTMLIPNLTQPTWSRTVKPLYDALVVQCHKEESIADNILNAITR*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0044	cloud	direct	high	623	0.998	GCA_000520055.1_03430
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3314145	3314810	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	39641	40306	GCA_000520055_1_1_3189	GCA_000520055_1_1_3189	-	5402276	.	cd07424	PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm.  The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine.  This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-).  The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes.  Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes.  PPPs belong to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets.  This domain is thought to allow for productive metal coordination.	MNIYERIDGSKYRNIWVVGDLHGCYTNLMKKLETIGFDTKKDLLISVGDLVDRGTENVECLELITFPWFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKGKKYVICHADYPCDKYEFGKPVDHQQVIWNRERISNSQDGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFCGNLTLIQVQGEGA*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0045	cloud	direct	high	665	0.998	GCA_000520055.1_03431
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3314807	3315418	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	40303	40914	GCA_000520055_1_1_3190	GCA_000520055_1_1_3190	-	5402276	.	PFAM:PF05766.11	NinG-recombination-protein	MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYWIKQAQQAVNAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIGQEAVEEIESNHNRYRWTVEECRAIKAEYQQKLKKLRNSRSEVA*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0046	cloud	direct	high	611	0.998	GCA_000520055.1_03432
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3315393	3315959	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	40889	41455	GCA_000520055_1_1_3191	GCA_000520055_1_1_3191	-	5402276	.	PFAM:PF05551.10	homing-endonuclease	MAKPARRRCNRKREDLTVKRIFELLSFDKSTGVFRWKVPTQGRIALNSVAGAFDSNGYSMIMIDGRRYKTHVLVFYITHNRWPAGQIDHVNGIRTDNRPENLRECLPIENSRNIRIRKNSKSGCRGVTWHKRQKKWNVRLGFHGKSKHFGCFDDLELAVLVAEEARDKYYGDFSGNERSTYANLSKEM*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0047	cloud	direct	high	566	0.998	GCA_000520055.1_03433
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3315952	3316068	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	41448	41564	GCA_000520055_1_1_3192	GCA_000520055_1_1_3192	-	5402276	.	.	hypothetical protein	MQLFSPSWYCGNTDIHSFGELCSGGQIQKTITEEEGDG*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0048	cloud	direct	high	116	0.991	GCA_000520055.1_03434
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3316505	3317395	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	42001	42891	GCA_000520055_1_1_3193	GCA_000520055_1_1_3193	+	5402276	.	.	hypothetical protein	MIPNSTSNKGYVCIDMQCSSTSEPTASTSSNRSIKLAASTNVYPITRNDSELTLNDFLDNSSSTSSLDYINELGSQLTLNDFLDNIKTNEVDRTCTDVVINIPQEIQTNTQENDLLLSDKNNSICIEIDERITKILTCKQKYQLDSIIHEIIPKENESAETVLHLMRVLNDQYHQVYNQSGCFYKAYMAIHNKIEQILPYAFRAGGGISIHLLIQALFFNGDYNKSPSQSQQPSLYTSPSPTINTEAFLSNVLSLDITQVRILGDLLSATLFHAPTIFYQYPKLIDEVKYCISNKK*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0049	cloud	direct	high	890	0.999	GCA_000520055.1_03435
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3317449	3318276	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	42945	43772	GCA_000520055_1_1_3194	GCA_000520055_1_1_3194	+	5402276	.	.	hypothetical protein	MSPLLMLNGAVKTGSIVRTIGRGVSYADIPLALAILGDSWYKAYKHGSSDNPNSAQRFISQEAAFKTTQRVLTQGLSLMSSLSGAIMRSLEKGTPPQMMSLFIVNILNLLFHQNPYEGASASANALKRSTYSHNPDILNTQAIALCVDLQHTKNITMPLFKTKDRISYAFNGQRTSPEDQKQILKEVINSCTQGERAILNTSQSETCKHKIDEIYEKRFSETELNTLPNEMKNFLIFLNKTHEKDISRLSIGNEVNEKIIAVIVKTLAYRESMLC*	.	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0050	cloud	direct	high	827	0.999	GCA_000520055.1_03436
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3318959	3319486	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	44455	44982	GCA_000520055_1_1_3195	GCA_000520055_1_1_3195	-	5402276	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTIKSNTPAHDKDCWQTPLWLFDALDIEFGFWLDSAASDKNALCAHWLTEADDALNSEWISHGAIWNNPPYSNIRPWVEKAAEQCIQQRQTVVMLVPEDMSVGWFSKTLESVDEVRIITDGRINFIEPSTGLEKKGNSKGSMLLIWRPFISPRRMFTIVSKAALMAIGQGVRRAA*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0051	shell	direct	high	527	0.998	GCA_000520055.1_03437
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3319483	3319923	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	44979	45419	GCA_000520055_1_1_3196	GCA_000520055_1_1_3196	-	5402276	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQPTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARWGDRAA*	mmseqs_cdd	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0052	shell	direct	high	440	0.998	GCA_000520055.1_03438
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3319997	3320287	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	45493	45783	GCA_000520055_1_1_3197	GCA_000520055_1_1_3197	-	5402276	.	PFAM:PF04079.15	Ren-like-exclusion-protein	MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRFATREEREGKMSTNLIFKECRQSAAMKRVLAVYGVKR*	phrogs_hmm	hypothetical_protein	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0053	shell	direct	high	290	0.997	GCA_000520055.1_03439
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3320284	3320985	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	45780	46481	GCA_000520055_1_1_3198	GCA_000520055_1_1_3198	-	5402276	.	PFAM:PF06992.10	Replication-protein-P	MKNIAAQMVNFDSEQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQNELNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVIAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDAELRRKAADELTCMTARINRGEAIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV*	rep_hall_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0054	cloud	direct	high	701	0.999	GCA_000520055.1_03440
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3320982	3321683	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	46478	47179	GCA_000520055_1_1_3199	GCA_000520055_1_1_3199	-	5402276	.	PFAM:PF04492.12	Replication-protein-O	MDRITDSQLSEITKLPVKRCNEAKLELVRMNIIKQQCGMFGPNKNISEWCIPQNEGKSLKTRDKTSLKLGDCYPSKQGDTKDTITKEKRKDYSSENSGESSDQPENDLSVVKPDAAIQSGSKWGTAEDLTAAEWMFDMVKTIAPSARKPNFAGWANDIRLMRERDGRNHRDMCVLFRWACQDNFWSGNVLSPAKLRDKWTQLEINRNKQQAVVTASKPKLDLTNTDWIYGVDL*	rep_hall_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0055	cloud	direct	high	701	0.999	GCA_000520055.1_03441
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3321813	3322139	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	47309	47635	GCA_000520055_1_1_3200	GCA_000520055_1_1_3200	+	5402276	.	PFAM:PF06504.10	Replication-protein-C	MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0056	shell	direct	high	326	0.997	GCA_000520055.1_03442
GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote	cenote	CDS	3322139	3323026	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C151	47635	48522	GCA_000520055_1_1_3201	GCA_000520055_1_1_3201	+	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C151	48522	3274505	3323027	GCA_000520055.1|CP006262.1@region_3274506_3323027@tool_cenote_CDS_0057	shell	direct	high	887	0.999	GCA_000520055.1_03444
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5313276	5313512	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	1	237	GCA_000520055_1_1_5043	GCA_000520055_1_1_5043	+	5402276	.	pfam07256	Protein of unknown function (DUF1435). This family consists of several hypothetical Enterobacterial proteins of around 80 residues in length. The function of this family is unknown.	MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLILTPVMLYHKQLRHYVLLPSCLALSAGIMLMLMNLNQG*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0001	persistent	direct	high	236	0.996	GCA_000520055.1_05436
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5314063	5315094	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	788	1819	GCA_000520055_1_1_5044	GCA_000520055_1_1_5044	-	5402276	.	PDB:2VDW_C	Capping-Enzyme-D1	MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0002	persistent	direct	high	1031	0.999	GCA_000520055.1_05440
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5315197	5315610	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	1922	2335	GCA_000520055_1_1_5045	GCA_000520055_1_1_5045	+	5402276	.	TIGR00664	DNA polymerase III, psi subunit. This small subunit of the DNA polymerase III holoenzyme in E. coli and related species appearsto have a narrow taxonomic distribution. It is not found so far outside the gamma subdivision proteobacteria. [DNA metabolism, DNA replication, recombination, and repair]	MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAALWQQICTYEHDFFPRND*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0003	persistent	direct	high	413	0.998	GCA_000520055.1_05441
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5315579	5316025	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	2304	2750	GCA_000520055_1_1_5046	GCA_000520055_1_1_5046	+	5402276	.	PRK09491	ribosomal-protein-alanine N-acetyltransferase; Provisional	MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0004	persistent	direct	high	446	0.998	GCA_000520055.1_05442
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5316040	5316717	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	2765	3442	GCA_000520055_1_1_5047	GCA_000520055_1_1_5047	+	5402276	.	PRK09449	dUMP phosphatase; Provisional	MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHNREQPEGIAPTWTVSSLHELEQLLCKH*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0005	persistent	direct	high	677	0.999	GCA_000520055.1_05443
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5317103	5318320	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	3828	5045	GCA_000520055_1_1_5048	GCA_000520055_1_1_5048	+	5402276	.	PDB:1Z19_B	Integrase	MALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPATGLKEAREEVIRLRGELESNRNPRLVKQAEKRKATEAMTVESVIRAWYEAYCVKNKKGSEQILRSFELHLFSKIGNIPHDAATLHDWLEVLEPLSTKTPAIADRLLINAKQAHVWAYKRKLIETRPLSDITGKDMDIRKGQKKRFLTHDEIKILYAAIDGSRMVPKYRAFIKLLLHFGCRSSELITARVDDFDFINKVWTVPPERHKTGDITGEPLKRPIIEPVEELIKYVISMNNGSDMLFTKEGSREPVGRTSLQSLPYNLMQYAWRRLGYQFPHWSLHDLRRTARTNFSDLTAPHIAEIMLGHKLPGVWQVYDKSDYLEEQRKAYQAWWERVESIVTCTCSD*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0006	cloud	direct	high	1217	0.999	GCA_000520055.1_05444
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5318454	5320586	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	5179	7311	GCA_000520055_1_1_5049	GCA_000520055_1_1_5049	+	5402276	.	5U1S_A	Separin (E.C.3.4.22.49), Securin	MELLQEHGAILKVVIMPTTGEQTIIQGFDTGLLNPEISNILFLLAKTPKEISEIFVNENDNFQPTLSGLNPIFLISKENLEKIPNIYQTPFCLIFCAKEDFSYVCALKKHFAIPPIICCNSKRADLPLNKINSIYSFDKVLFSRLKFIEDKIRKNHSEKKISTKLKRRGALFNKSPWRSTLNNSTLPNELLIESLGYMLSPPKRIKDGSSKREFIEIILHSVDAYTECLKELDIPLPTEVLLFAPGMHSFLYDKNNDFYELITENLSTIEKKFLIDGVLRNPGYSGIRLDINSDRKELFKSPAFRYLTSLRRAEMRLTTAAITLFSINKKIPAIRLPNAINHYSNYLKNLEDLATSSGINSEAFITKSKAFNTVIRRALGCKLRTYISKNYSDLSFVCDVPLDWIRFNNIPIMFSHEISRINATPGNVLLQSASAFPRVLVKASELRKVLVIRSFEPDDHLKFILENAIEIFKKQMPDLDCEIIDVRSKAEFIDALNQYQGHILVMDCHGNHDGNGSHGWLIIGEDKVDTWSLRKIARIPPIVILSACLTSALSGSHASVANGFVISGALSVIGTLLPVNAIDSAVFVSRLIYRFYEFPSTLSTNFTHVNVRLFLSVFLRMSYASDLIRGFLSEDLIPNNSWKKDAVDINMYINMLHHDWYDYVINKLTMLTGLTKKDVLDFIDRKLFITETMCYSQIGFPDAITISLKD*	hhsuite_tools	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0007	cloud	direct	high	2132	1.0	GCA_000520055.1_05445
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5320694	5320888	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	7419	7613	GCA_000520055_1_1_5050	GCA_000520055_1_1_5050	-	5402276	.	PFAM:PF06806.11	excisionase	MNNLMTTKQVADFCGVSVSTVLRWNSVNRRTGQKYRPDFPDPDIKSCPNKWASRKIYKFAGVIE*	phrogs_hmm	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0008	cloud	direct	high	194	0.995	GCA_000520055.1_05446
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5320888	5321508	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	7613	8233	GCA_000520055_1_1_5051	GCA_000520055_1_1_5051	-	5402276	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALASLEEEPVAWLHSDNGLGIPAITRSKNIADSWLSKGWYVQPLYIAKPVLVVPDARPSLNNGIVGFDEGWNACRATMLHSAKPVSQTYKLNKLSGNSPVTPDGWISCSERMPNDKQYVWCWGKSYGWTECDTFEGYYDCSRNKWWAVTDNGEEPASKVTHWMPLPEPPQEVK*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0009	cloud	direct	high	620	0.998	GCA_000520055.1_05447
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5321508	5321870	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	8233	8595	GCA_000520055_1_1_5052	GCA_000520055_1_1_5052	-	5402276	.	PF04448.12	Protein of unknown function (DUF551)	MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENFNITHWAVIPKAPEAGA*	hhsuite_tools	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0010	shell	direct	high	362	0.997	GCA_000520055.1_05448
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5321861	5322397	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	8586	9122	GCA_000520055_1_1_5053	GCA_000520055_1_1_5053	-	5402276	.	PFAM:PF12917.6	deoxyribonucleoside-5'-monophosphate-phosphatase	MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNELSELRKCA*	phrogs_hmm	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0011	shell	direct	high	536	0.998	GCA_000520055.1_05449
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5322525	5323349	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	9250	10074	GCA_000520055_1_1_5054	GCA_000520055_1_1_5054	-	5402276	.	COG5532	Uncharacterized conserved protein YfdQ, DUF2303 family [Function unknown]. 	MSQSLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSMLNLGTINEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0012	shell	direct	high	824	0.999	GCA_000520055.1_05450
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5323415	5323777	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	10140	10502	GCA_000520055_1_1_5055	GCA_000520055_1_1_5055	-	5402276	.	.	hypothetical protein	MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGDPDGKLRAAGH*	.	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0013	shell	direct	high	362	0.997	GCA_000520055.1_05451
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5324246	5324662	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	10971	11387	GCA_000520055_1_1_5056	GCA_000520055_1_1_5056	+	5402276	.	NF033230	hypothetical protein	MSGNIYTLYKSHCENVGKYRGIEISGVVSSVEISKVESMATLLTLLDLVLHEHRKKFGTPYNQLNGKKALVHLILMKHHWMPKQINEMKFDELLLSIQDELTLDKISVTAQKFLDYRDWRSQIHHFEPPRVSWRVFYL*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0014	cloud	direct	high	416	0.998	GCA_000520055.1_05452
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5324665	5325552	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	11390	12277	GCA_000520055_1_1_5057	GCA_000520055_1_1_5057	-	5402276	.	PDB:4U7B_B	Mos-transposase	MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTLHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0015	shell	direct	high	887	0.999	GCA_000520055.1_05453
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5325834	5326040	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	12559	12765	GCA_000520055_1_1_5058	GCA_000520055_1_1_5058	-	5402276	.	.	hypothetical protein	MHKTEPKIVAPGYTDEEIYEWMTKKLAAINQLRELLSYRQETIDSLKKLDQEIMVLSQDATLDIVQTN*	.	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0016	cloud	direct	high	206	0.995	GCA_000520055.1_05455
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5326288	5326914	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	13013	13639	GCA_000520055_1_1_5059	GCA_000520055_1_1_5059	-	5402276	.	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) [Transcription, Signal transduction mechanisms]. 	METVGQRIKALRRVTGTSQKELGKFCGVSDVAVGYWEKDINTPGGEALSKLAKFFNTSIDYILYGAEFEGKLVTNMRRVPVISWVQAGQFTECRAAEVFSEVDKWVDTSLKIGDNSFALEVKGDSMTNPNGLPTIPEGATVIVDPDAEPRHGKIVIARLDGTNEATVKKLVIDGPQKFLVPLNPRYPNIPINGNCLIIGVVKGVQYEL*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0017	cloud	direct	high	626	0.998	GCA_000520055.1_05456
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5327012	5327212	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	13737	13937	GCA_000520055_1_1_5060	GCA_000520055_1_1_5060	+	5402276	.	pfam14549	DNA-binding transcriptional regulator Cro. Bacteriophage P22 Cro protein represses genes normally expressed in early phage development and is necessary for the late stage of lytic growth. It does this by binding to the OL and OR operator-regions normally used by the repressor protein for lysogenic maintenance.	MTTDDIESYFGSIEKVAAFFGITTEAVYQWRNRPGQLIPKGRAAEAAYRTCGRLPFKPELYEKSNG*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0018	cloud	direct	high	200	0.995	GCA_000520055.1_05457
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5327250	5327801	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	13975	14526	GCA_000520055_1_1_5061	GCA_000520055_1_1_5061	+	5402276	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MGKHHWKVEKQPEWYVKAVRKTIAALPGGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMILQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSRQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGAVACRDCGETNA*	phrogs_hmm	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0019	cloud	direct	high	551	0.998	GCA_000520055.1_05458
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5327798	5328136	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	14523	14861	GCA_000520055_1_1_5062	GCA_000520055_1_1_5062	+	5402276	.	.	hypothetical protein	MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVLCDKLTAGSKITTECPSESFVGSRKHNELSTSAKAMSMSASARSNSFVVNSGK*	.	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0020	shell	direct	high	338	0.997	GCA_000520055.1_05459
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5328146	5329087	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	14871	15812	GCA_000520055_1_1_5063	GCA_000520055_1_1_5063	+	5402276	.	PFAM:PF04492.12	Replication-protein-O	MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGNRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFDASKSGKKAGFHPSESGGDPSVKSKHDPSDKKPSRPDASQPDTQTDEQDFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKSSYDNVDYSQIPAGFRG*	rep_hall_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0021	shell	direct	high	941	0.999	GCA_000520055.1_05460
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5329090	5329569	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	15815	16294	GCA_000520055_1_1_5064	GCA_000520055_1_1_5064	+	5402276	.	PFAM:PF14557.5	transcriptional-activator	MSLMSEIQKFIESNPGCTTGDIANAFAYFPRPRVLNTTSKLRQCRRVAYRSEGKTHRHFSRKAVLPPEPVLKHMSVASKSYVGTNDQRVILRLIQQAEDLESRGLFRRAATVWMEAFRESHSQSERNNFLARRERCVRKSKRCVASGEEWYLPGNYVGA*	phrogs_hmm	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0022	cloud	direct	high	479	0.998	GCA_000520055.1_05461
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5329569	5329895	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	16294	16620	GCA_000520055_1_1_5065	GCA_000520055_1_1_5065	+	5402276	.	TIGR00498	SOS regulatory protein LexA. LexA acts as a homodimer to repress a number of genes involved in the response to DNA damage (SOS response), including itself and RecA. RecA, in the presence of single-stranded DNA, acts as a co-protease to activate a latent autolytic protease activity (EC 3.4.21.88) of LexA, where the active site Ser is part of LexA. The autolytic cleavage site is an Ala-Gly bond in LexA (at position 84-85 in E. coli LexA; this sequence is replaced by Gly-Gly in Synechocystis). The cleavage leads to derepression of the SOS regulon and eventually to DNA repair. LexA in Bacillus subtilis is called DinR. LexA is much less broadly distributed than RecA. [DNA metabolism, DNA replication, recombination, and repair, Regulatory functions, DNA interactions]	MTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKRGVARGITLHTAVKDDDSEAVGIIRALLAGEENARLRATHWLHERGLKV*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0023	shell	direct	high	326	0.997	GCA_000520055.1_05462
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5329892	5330281	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	16617	17006	GCA_000520055_1_1_5066	GCA_000520055_1_1_5066	+	5402276	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAIVEQLHRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDRQVKRMLVEWGPVIPKGKVEITISKYEKPAGAAA*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0024	shell	direct	high	389	0.997	GCA_000520055.1_05463
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5330301	5331098	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	17026	17823	GCA_000520055_1_1_5067	GCA_000520055_1_1_5067	+	5402276	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MNNLMVIDGIEVRRDAYGRYSLNDLHRAAGSLDKHKPAFWLRNEQTERLISELQICNSVNIEPVNVIRGGNNQGTYVCKELVYAYAMWISPSFHLKVIRTFDMVTSAPEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNLAPRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMVKLGIVEQRERYSRTAINNIKKFWSLTAKGCMFGKNITSPANPRETQPHLFESRFPELLKLLDTVH*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0025	shell	direct	high	797	0.999	GCA_000520055.1_05464
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5331106	5332095	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	17831	18820	GCA_000520055_1_1_5068	GCA_000520055_1_1_5068	+	5402276	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLVRNDLADALPESAARKALRLPKPVVPSVTRESDLVPSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVTFEEKYGSQLELIFRFIDRALAIGVLA*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0026	shell	direct	high	989	0.999	GCA_000520055.1_05465
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5332109	5332861	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	18834	19586	GCA_000520055_1_1_5069	GCA_000520055_1_1_5069	+	5402276	.	pfam03589	Antitermination protein. 	MNLEALPKYYSPKSPKLSDAAPATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKAGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEPCAGTGFHNVLREVVKYSRSGESVIKEEWVKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHGAPVYKICGRCNGNRFSRLPTTLARCHVQKLVPDLTDYQWYKGYADVIDKLVTKCWQEEAYAEVQLRKVTR*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0027	shell	direct	high	752	0.999	GCA_000520055.1_05466
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5333277	5333489	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	20002	20214	GCA_000520055_1_1_5070	GCA_000520055_1_1_5070	-	5402276	.	PRK15463	cold shock-like protein CspF; Provisional	MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0028	shell	direct	high	212	0.995	GCA_000520055.1_05467
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5333790	5334005	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	20515	20730	GCA_000520055_1_1_5071	GCA_000520055_1_1_5071	+	5402276	.	PRK10354	RNA chaperone/antiterminator CspA. 	MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNFRTLFEGQKVTFSVESGAKGPAAANVIITD*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0029	persistent	direct	high	215	0.995	GCA_000520055.1_05469
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5334767	5334973	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	21492	21698	GCA_000520055_1_1_5072	GCA_000520055_1_1_5072	+	5402276	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MDKLTTGIAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKVARRE*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0030	persistent	direct	high	206	0.995	GCA_000520055.1_05470
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5334978	5335529	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	21703	22254	GCA_000520055_1_1_5073	GCA_000520055_1_1_5073	+	5402276	.	pfam07041	Protein of unknown function (DUF1327). This family consists of several hypothetical bacterial proteins of around 115 residues in length which seem to be specific to Escherichia coli. The function of this family is unknown.	MTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARMRIRQVFLDVAAGLCVGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRRDEQFAAFYDYCIEVTRRSFVKIFEEGKSLQ*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0031	cloud	direct	high	551	0.998	GCA_000520055.1_05471
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5335477	5335737	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	22202	22462	GCA_000520055_1_1_5074	GCA_000520055_1_1_5074	-	5402276	.	.	hypothetical protein	MDYTNLPKQTFADLIALRQAVVALINLLPEKEKELVKALLNRTAADFSSYPLTDDLADLPELIAASAIKLTEEIYPPQKSSQNSCE*	.	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0032	cloud	direct	high	260	0.996	GCA_000520055.1_05472
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5335851	5336384	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	22576	23109	GCA_000520055_1_1_5075	GCA_000520055_1_1_5075	+	5402276	.	CDD:COG3772	lysozyme	MNVKIRYSLSAAVLALIAASAPAPDILDQFLDEKEGNHTTAYRDGSGIWTICRGATMVDGKPVIPGMKLSKEKCAQVNAIERDKALAWVERNIKVPLTEPQKVGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0033	shell	direct	high	533	0.998	GCA_000520055.1_05473
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5336381	5336878	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	23106	23603	GCA_000520055_1_1_5076	GCA_000520055_1_1_5076	+	5402276	.	pfam10721	Protein of unknown function (DUF2514). This family is conserved in bacteria and some viruses. The function is not known.	MNQIFTVILLVLVGFVVGNVWSDRGWQKKWAERDAAELSQEVNVQFAARIIEQGRTISRDEAVKDAQQKAAEISARAADLSDSVNQLRAEATKYAIRLDAAQHTANLAAAVRGKTTKAAEGMLTNMLGDIAAEAQLYAEIADKRYIAGVTCQRIYESLRDKKYQM*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0034	shell	direct	high	497	0.998	GCA_000520055.1_05474
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5337239	5337454	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	23964	24179	GCA_000520055_1_1_5077	GCA_000520055_1_1_5077	+	5402276	.	PRK09890	cold shock protein CspG; Provisional	MMSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0035	shell	direct	high	215	0.995	GCA_000520055.1_05476
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5338129	5338302	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	24854	25027	GCA_000520055_1_1_5078	GCA_000520055_1_1_5078	+	5402276	.	pfam08178	GnsA/GnsB toxin of bacterial toxin-antitoxin system. This family consists of the GnsA/GnsB family. GnsA and GnsB are multicopy suppressors of the secG null mutation. These proteins participate in the synthesis of phospholipids, suggesting the functional relationship between SecG and membrane phospholipids. Over-expression of gnsA and gnsB causes a remarkable increase in the unsaturated fatty acid content. However, the gnsA-gnsB double null mutant exhibits no effect. Both proteins are predicted to possess a helix-turn-helix structure. GnsAB is a family of putative bacterial toxins (both GnsA and GnsB) that, are neutralized by the antitoxin YmcE, pfam15939.	MNIEELKTKTEADISEYITKKIIELKKKTGKEVTNIQFTAREKMTGLESYDIKIDLI*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0036	shell	direct	high	173	0.994	GCA_000520055.1_05477
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5338598	5338804	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	25323	25529	GCA_000520055_1_1_5079	GCA_000520055_1_1_5079	+	5402276	.	.	hypothetical protein	MHKDQYTDAPSQEQVRVKTMLTSTISMSYPDVVIACIEHQVSLEAFRAIEAALVKHDKNSKDYSLVVD*	.	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0037	cloud	direct	high	206	0.995	GCA_000520055.1_05478
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5339357	5339848	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	26082	26573	GCA_000520055_1_1_5080	GCA_000520055_1_1_5080	+	5402276	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDHELKNLVLNINQLAALSGLHRQTVVARLKNIRPAGGHDKLKLYRLTDILTEFMGLPPPVAEGEMDPHERKAWYQSERERLKFEQETAQLIPASDVRREFAIWAKAVVQVLETLPDILERDCGLQPAAVSRVQSIIDDLRDQIALRVTEAGADDEEELQQEE*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0038	cloud	direct	high	491	0.998	GCA_000520055.1_05480
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5339848	5341950	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	26573	28675	GCA_000520055_1_1_5081	GCA_000520055_1_1_5081	+	5402276	.	CDD:COG5525	Large-Terminase	MLNQETAKAARTDSGYILRAPRRMRVADAVAQYMRVPMGAGNSVPWDPLVAPYVIEPMNCLASREYDAVIFVGPARTGKTIGLIDGWVIYNVICDPADMLIIQMTEEKAREHSKKRLARTFRVSPEVVSRLSPNKNDNNVYDRTFLAGNYLKIGWPSVNIMSSSDYKCVALTDYDRFPEDIDGEGDAFSLASKRTTTFMSSGMTLVESSPGRDVKDVKWRRTSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPCGDVVAGFRDIADPVLASEAAYIQCPSCSGRIMPEQKRELNGRGVWLRDGESINADGSRYGDPRRSRIASFWMEGPAAAYQTLSQLVYKLLAAEQEYETTGSEETLKTVINTDWGLPYLPRASMEQRKSELLEQRAEPVPSRSVPDGVNFLVATVDVQAGRHRRFVVQVTGYGSRGERWIIDRYNITQSLRGDSDGESQRIDPASYPEDWDVLLTDVFHKSWPLASDPSQQMRLMAMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLITRTFPDNTGRTGRRAQAAGDVPLWLLQTDALKDRVNNALWRDSPGPGYVHFPDWLGSWFYDELTYEERSSDGKWSKPGRGANEAFDLMVYAEALVILHGYEKIRWPDAPEWASRETWLECVPDSTEPSPTPEPVSTPVKKQKRKKTVTDDVNPWLTSGGWL*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0039	cloud	direct	high	2102	1.0	GCA_000520055.1_05481
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5341947	5342159	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	28672	28884	GCA_000520055_1_1_5082	GCA_000520055_1_1_5082	+	5402276	.	PDB:2L6Q_A	head-to-tail-adaptor	MNQNDIEAMIQRYTEAEMAVLDGKSVTFNGQQMTMENLSEIRQGRQEWERRLAALITRRRGHPGYRLARF*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0040	cloud	direct	high	212	0.995	GCA_000520055.1_05482
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5342159	5343667	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	28884	30392	GCA_000520055_1_1_5083	GCA_000520055_1_1_5083	+	5402276	.	CDD:COG5511	Major-Capsid-protein	MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKTTRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLEERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTPSAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGTSLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNGSKDKERELTIQPGIIYDDLKPGEEIGMVKSDRPNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDPASDKGGSSAATKRQEPQHTDDQSEE*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0041	cloud	direct	high	1508	0.999	GCA_000520055.1_05483
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5343612	5345639	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	30337	32364	GCA_000520055_1_1_5084	GCA_000520055_1_1_5084	+	5402276	.	PDB:6WKK_D	Major-Capsid-Protein	MPQRNDRSRSTPTTSPKNNSWFRMQAGHQSDADIYIYDEIGFWGVTAKQFISDLNALGDITHINLHINSPGGDVFEGIAIFNALKTHGASITVYVDGVAASMASVIAMVGNPVIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVEAVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQVTPAVKAMACIQSKRTEEFKKMPESIRNMITPPRNSAPRVQDDGPAASRTPVQAAAPVVDENSIRAQVLAEQKARVNGINDLFAMFGGRYQSLQAQCLADPECSLEQAREKLLNEMGRESTPSNKNTPAHIYAGNGNFVGDGIRQALMARAGFEKTERDNVYNGMTLREYARMSLTERGIGVSSYNPMQMVGAAFTHSTSDFGNILLDVANKAILQGWEDAPETYEQWTRKGQLSDFKIAHRVGMGGFSALRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDLNMLTDVPMKLGRAAKSTIADLVYAILTSNPKISTDNVSLFDKAKHANVLESAAMDVASLDKARQLMRVQKEGERHLNIRPAFVLVPTAMESVANQVIRSSSVKGADINAGIINPVKDFATVIAEPRLDDNSQTTFYLAASKGSDTIEVAYLNGVDTPYIDQMEGFSVDGVTTKVRIDAGVAPVDHRGLVKCTA*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0042	cloud	direct	high	2027	1.0	GCA_000520055.1_05484
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5345726	5346049	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	32451	32774	GCA_000520055_1_1_5085	GCA_000520055_1_1_5085	+	5402276	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNFVEEGKTVAIVASAAISSGDLVQVGDVFAVALTDIPQGETGDGITEGVFMLPKLKTDDMKTGKKVYMKSGKVQLTNSGSDPLVGVVWADAGTSAEEVPVKLNV*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0043	cloud	direct	high	323	0.997	GCA_000520055.1_05485
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5346042	5346317	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	32767	33042	GCA_000520055_1_1_5086	GCA_000520055_1_1_5086	+	5402276	.	PDB:2KX4_A	head-closure-knob	MSDPFSRLAARMDAITVRKMGKTASINDVDMTVIPGETLAELNALSGPAVSLVVFSSGYRPRRGDRVVYDGQQWTVTRHERFNGKPMIFIE*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0044	cloud	direct	high	275	0.996	GCA_000520055.1_05486
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5346329	5346907	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	33054	33632	GCA_000520055_1_1_5087	GCA_000520055_1_1_5087	+	5402276	.	PFAM:PF06763.10	minor-tail-protein	MKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAGNTVAGDNQVKGIPLKLVRQRVRVFKASPSGKMTARIRVNRGNLPAIKLGTARVRLARRGGKLQYRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIPLSGPLTQAFEDARDHIIAAEMPKQLGYALKQQLRLWLTR*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0045	cloud	direct	high	578	0.998	GCA_000520055.1_05487
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5346904	5347305	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	33629	34030	GCA_000520055_1_1_5088	GCA_000520055_1_1_5088	+	5402276	.	PDB:3FZ2_G	Minor-tail-protein-	MNRHTQIRQAVLARLREQCGDSATFFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDVPALSGLIDILIPLGFNYQRDNEMATWAMAEITYQITYTN*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0046	cloud	direct	high	401	0.998	GCA_000520055.1_05488
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5347316	5347489	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	34041	34214	GCA_000520055_1_1_5089	GCA_000520055_1_1_5089	+	5402276	.	PFAM:PF16461.4	tail-tube-protein	MTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMVKDLQPGEMTADAEDE*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0047	cloud	direct	high	173	0.994	GCA_000520055.1_05489
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5347523	5349061	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	34248	35786	GCA_000520055_1_1_5090	GCA_000520055_1_1_5090	-	5402276	.	PFAM:PF03050.13	Transposase-IS66-family	MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTRRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGRITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0048	shell	direct	high	1538	0.999	GCA_000520055.1_05490
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5349111	5349458	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	35836	36183	GCA_000520055_1_1_5091	GCA_000520055_1_1_5091	-	5402276	.	NF033819	IS66 family insertion sequence element accessory protein TnpB. The IS66 family insertion sequence element encodes a DDE transposase TnpC, and two accessory proteins, TnpA and TnpB. It has been assumed that the TnpA, TnpB, and TnpC proteins are produced independently in appropriate amounts and form a complex, which acts as a transposase to promote the transposition of an IS66 family element.	MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0049	shell	direct	high	347	0.997	GCA_000520055.1_05491
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5349455	5349835	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	36180	36560	GCA_000520055_1_1_5092	GCA_000520055_1_1_5092	-	5402276	.	NF038385	IS66-like element accessory protein TnpA. 	MQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0050	cloud	direct	high	380	0.997	GCA_000520055.1_05492
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5350060	5350509	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	36785	37234	GCA_000520055_1_1_5093	GCA_000520055_1_1_5093	+	5402276	.	PFAM:PF16461.4	tail-tube-protein	MFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGASDKAISVHSTDPQTATVTLNGLVATVKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0051	cloud	direct	high	449	0.998	GCA_000520055.1_05493
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5350570	5350956	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	37295	37681	GCA_000520055_1_1_5094	GCA_000520055_1_1_5094	+	5402276	.	PFAM:PF06894.10	tail-assembly-chaperone	MFLKQGTFNYEKQSVVLSELSGLQRIEYLAFVQQRTAKFDAEEGELPEAERQIAFLRMGMDINAWLVSRSLWNADQSKDVETLCASVITTWSYDALGAGAEMVLSLSGMGTIDNAGDDEHEALTPEKS*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0052	cloud	direct	high	386	0.997	GCA_000520055.1_05494
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5350965	5351294	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	37690	38019	GCA_000520055_1_1_5095	GCA_000520055_1_1_5095	+	5402276	.	PFAM:PF06223.11	Minor-tail-protein-	MQFVMRLAREFRRADWRRMLSEMSATELGEWGDYFRMQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0053	cloud	direct	high	329	0.997	GCA_000520055.1_05495
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5351266	5354331	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	37991	41056	GCA_000520055_1_1_5096	GCA_000520055_1_1_5096	+	5402276	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQRFMERQTQAARQTMQAASSAATAASVHAQTVEKSAQAHERMAREVEQTRQRMEALSQKMREEQAQAMALAEAQDKAAAAFYRQIDSVKQASAGLQELQRIQQQIRQARNSGGIGQQDYLALISEVTAKTRVLTQAEAEATRQKVAFIRQLKEQATRQNLSSSELLRAKAAQLGVSSAAEVYIRKMEQAGKATHSLGLKSAAARQEIGVLIGELVRGNLGALRGSGITLANRAGWIDTLMSPKGMMLGGVIGGIAAAVYGLGKAWYDGQKEGEEFNRQLSLTGHYAGVTAGQLWTLSRAISGNGITQHAAAGALAQVVGSGAFRGNDIGMVARAAAQMERSVGQSVSDTISQFKRLKDDPVNAAKALDNELHFLTATQLEQIRVLGDQGRSSDAARIAMSALAEETGRRTADIDNNLNALGSTLKYLSDLWSRFWDAAMNIGREDSLDEQIAALQEKVSRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALNRMNESEAARHQREIARINSMQYADQAVRDAAIQRENERYEKALASGKKKTRETRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATEKMTEAHKQLLALQQRISDLDGKKLTTDEKSVLARKDELIQALMLLDVKQQELQKQTALNDLKKKTIQLTSQLAEEERAQRQQHDLDIATVGMGDQQRQRYQVQLSLRQKNQQQLEQLRRDSEQKGTYNTDDYRKAEQALTESLNRQLNENRRYWQQLEVVQGNWKNGVLRAFQDFTVDADNTAGTAEQVFSSAFSNMGNGLATFVTTGKLNFKSFTSSVLSDMAKILAQATMMKSIKGIGSVLGFDLSSLSLNANGGIYQSADLSRYSGTVVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADIGGSGMAMFAPQYNIEINNDGTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0054	cloud	direct	high	3065	1.0	GCA_000520055.1_05496
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5354331	5354660	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	41056	41385	GCA_000520055_1_1_5097	GCA_000520055_1_1_5097	+	5402276	.	PFAM:PF05939.12	minor-tail-protein	METFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSIYSVTIRVRKCEHPSLKAFLERHGGVRAFQWTPPYDWKPIRVVCRKWSASVGALWVTITADFEQVVA*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0055	cloud	direct	high	329	0.997	GCA_000520055.1_05497
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5354670	5355368	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	41395	42093	GCA_000520055_1_1_5098	GCA_000520055_1_1_5098	+	5402276	.	PFAM:PF05100.11	minor-tail-protein-	MQDIPQETHHETTRLTQSAQMVLWEIDLTEVGGERYFFCNEQNEKSEPVTWQGRQYQAYPIQGTGFELNGKGSAARPTLTVSNLYGMVTGMVEDMQSLVGGTVVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDGAVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNVGNFGGFLSINKLSQ*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0056	persistent	direct	high	698	0.999	GCA_000520055.1_05498
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5355517	5355996	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	42242	42721	GCA_000520055_1_1_5099	GCA_000520055_1_1_5099	+	5402276	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MAPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRNGQNLYLDNLEATGLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLNN*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0057	persistent	direct	high	479	0.998	GCA_000520055.1_05499
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5356022	5356669	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	42747	43394	GCA_000520055_1_1_5100	GCA_000520055_1_1_5100	+	5402276	.	PFAM:PF06805.11	tail-assembly-protein-I	MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQIPAFRQKLSDGWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMVLGGVAQMLAPKARTPTATSTDNGKQNTYFSSLDNMVAQGNSLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0058	shell	direct	high	647	0.998	GCA_000520055.1_05500
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5356730	5360128	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	43455	46853	GCA_000520055_1_1_5101	GCA_000520055_1_1_5101	+	5402276	.	PFAM:PF13550.5	tail-protein	MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKSVLLNSTPVLDNEGNTNISGVTVVFRAGEQEQSPPEGFESSGSETVLGTEVKYDTPITRTITSATIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTTSQYLASVVVDNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGSQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCLWDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNSQTRTLTLDREITLPSSGTTLISLVDGSGNPVSVEVQSVTDGVKVKVSRVPDGVAGYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTAETTYRFTQLALGNYRLTVRAVNAWRQQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETTARYLGTALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGRASDDAEGYLDFFKGQITESHLGKELLEKVDLTEDNASRLDEFSKEWKDANDKWNAMWAVKIEQTKDGKHYVAGIGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETPMFVAQGNQIFMNDVFLKRLTAPTITSGGSPPVFSLTSDGKLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGTITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0059	persistent	direct	high	3398	1.0	GCA_000520055.1_05501
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5360195	5360794	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	46920	47519	GCA_000520055_1_1_5102	GCA_000520055_1_1_5102	+	5402276	.	pfam06316	Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	MRKLYAAIFSAAICLAVSGAPAWASEHQSTLSAGYLHASTNVSGSDDLNGINVKYRYEFTDTLGLVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF*	mmseqs_cdd	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0060	shell	direct	high	599	0.998	GCA_000520055.1_05502
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5360859	5364212	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	47584	50937	GCA_000520055_1_1_5103	GCA_000520055_1_1_5103	+	5402276	.	PFAM:PF06820.11	tail-fibre	MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDTRPEALRRFELMVEEVARNASAVAQNTAAAKKSASNASTSAREAATHATDAAGSARAASTSAGQAASSAQSASSSAGTASAKATEASKSAAAAESSKSAAATSAGAAKTSETNAAASQQSAATSASTATTKASEAATSARDASASKEAAKSSETNAASSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASVSATAAGKSAESAASSASTATTKAGEATEQATAAARSASAAKTSETNAKASETRAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGRFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHSVTGASAVSQWSQNGSVHKVVSAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0061	shell	direct	high	3353	1.0	GCA_000520055.1_05503
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5364212	5364787	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	50937	51512	GCA_000520055_1_1_5104	GCA_000520055_1_1_5104	+	5402276	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP*	hallmark_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0062	persistent	direct	high	575	0.998	GCA_000520055.1_05504
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5364885	5365475	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	51610	52200	GCA_000520055_1_1_5105	GCA_000520055_1_1_5105	-	5402276	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI*	common_virus_hmm	common_virus	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0063	shell	direct	high	590	0.998	GCA_000520055.1_05506
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5365854	5366087	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	52579	52812	GCA_000520055_1_1_5106	GCA_000520055_1_1_5106	-	5402276	.	2OXL_A	Hypothetical protein ymgB	MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKV*	hhsuite_tools	hypothetical_protein	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0064	shell	direct	high	233	0.996	GCA_000520055.1_05507
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	CDS	5366696	5366944	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	53421	53669	GCA_000520055_1_1_5107	GCA_000520055_1_1_5107	-	5402276	.	PRK10597	DNA damage-inducible protein I; Provisional	MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH*	mmseqs_cdd	nonviral_gene	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_CDS_0065	cloud	direct	high	248	0.996	GCA_000520055.1_05508
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	tRNA	1082148	1082223	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	20368	20443	tRNA-Met	tRNA-Met	+	5402276	.	tRNAscan-SE score: 80.7	Met	NA	tRNAscan-SE	.	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	tRNA	1082231	1082307	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	20451	20527	tRNA-Arg	tRNA-Arg	+	5402276	.	tRNAscan-SE score: 41.3	Arg	NA	tRNAscan-SE	.	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	tRNA	1082321	1082397	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	20541	20617	tRNA-Arg	tRNA-Arg	+	5402276	.	tRNAscan-SE score: 72.1	Arg	NA	tRNAscan-SE	.	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote	cenote	tRNA	1063342	1063432	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C53	1562	1652	tRNA-Undet	tRNA-Undet	-	5402276	.	tRNAscan-SE score: 23.5	Undet	NA	tRNAscan-SE	.	C53	50321	1061781	1112102	GCA_000520055.1|CP006262.1@region_1061782_1112102@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	tRNA	1585268	1585343	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	15831	15906	tRNA-Met	tRNA-Met	+	5402276	.	tRNAscan-SE score: 80.7	Met	NA	tRNAscan-SE	.	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	tRNA	1585345	1585420	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	15908	15983	tRNA-Lys	tRNA-Lys	+	5402276	.	tRNAscan-SE score: 28.3	Lys	NA	tRNAscan-SE	.	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote	cenote	tRNA	1585434	1585510	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C81	15997	16073	tRNA-Arg	tRNA-Arg	+	5402276	.	tRNAscan-SE score: 72.1	Arg	NA	tRNAscan-SE	.	C81	42030	1569438	1611468	GCA_000520055.1|CP006262.1@region_1569439_1611468@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote	cenote	tRNA	1944980	1945055	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C97	28909	28984	tRNA-Met	tRNA-Met	-	5402276	.	tRNAscan-SE score: 52.5	Met	NA	tRNAscan-SE	.	C97	48112	1916072	1964184	GCA_000520055.1|CP006262.1@region_1916073_1964184@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	tRNA	2296281	2296353	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	31528	31600	tRNA-Met	tRNA-Met	-	5402276	.	tRNAscan-SE score: 80.6	Met	NA	tRNAscan-SE	.	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	tRNA	2296192	2296268	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	31439	31515	tRNA-Arg	tRNA-Arg	-	5402276	.	tRNAscan-SE score: 56.7	Arg	NA	tRNAscan-SE	.	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote	cenote	tRNA	2296105	2296178	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C109	31352	31425	tRNA-Arg	tRNA-Arg	-	5402276	.	tRNAscan-SE score: 72.1	Arg	NA	tRNAscan-SE	.	C109	48400	2264754	2313154	GCA_000520055.1|CP006262.1@region_2264755_2313154@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	tRNA	2467051	2467126	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	48454	48529	tRNA-Asn	tRNA-Asn	+	5402276	.	tRNAscan-SE score: 74.5	Asn	NA	tRNAscan-SE	.	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	tRNA	2465973	2466059	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	47376	47462	tRNA-Ser	tRNA-Ser	-	5402276	.	tRNAscan-SE score: 77.8	Ser	NA	tRNAscan-SE	.	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	tRNA	2449326	2449398	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	30729	30801	tRNA-Met	tRNA-Met	-	5402276	.	tRNAscan-SE score: 80.6	Met	NA	tRNAscan-SE	.	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote	cenote	tRNA	2449149	2449222	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C115	30552	30625	tRNA-Arg	tRNA-Arg	-	5402276	.	tRNAscan-SE score: 69.2	Arg	NA	tRNAscan-SE	.	C115	53622	2418598	2472220	GCA_000520055.1|CP006262.1@region_2418599_2472220@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	tRNA	2747196	2747268	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	37849	37921	tRNA-Met	tRNA-Met	-	5402276	.	tRNAscan-SE score: 80.6	Met	NA	tRNAscan-SE	.	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	tRNA	2747109	2747185	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	37762	37838	tRNA-Arg	tRNA-Arg	-	5402276	.	tRNAscan-SE score: 57.7	Arg	NA	tRNAscan-SE	.	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote	cenote	tRNA	2747022	2747095	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C131	37675	37748	tRNA-Arg	tRNA-Arg	-	5402276	.	tRNAscan-SE score: 72.6	Arg	NA	tRNAscan-SE	.	C131	57451	2709348	2766799	GCA_000520055.1|CP006262.1@region_2709349_2766799@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	tRNA	5313790	5313873	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	515	598	tRNA-Leu	tRNA-Leu	-	5402276	.	tRNAscan-SE score: 63.8	Leu	NA	tRNAscan-SE	.	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	tRNA	5313675	5313758	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	400	483	tRNA-Leu	tRNA-Leu	-	5402276	.	tRNAscan-SE score: 61.0	Leu	NA	tRNAscan-SE	.	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote	cenote	tRNA	5313554	5313637	GCA_000520055.1	CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055.1_CP006262.1	GCA_000520055.1|CP006262.1	GCA_000520055_1_1	GCA_000520055_1_1@C247	279	362	tRNA-Leu	tRNA-Leu	-	5402276	.	tRNAscan-SE score: 63.8	Leu	NA	tRNAscan-SE	.	C247	53669	5313276	5366945	GCA_000520055.1|CP006262.1@region_5313277_5366945@tool_cenote_tRNA_0001	.	.	.	.	.	.