core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	251344	252204	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	1	861	GCA_000620985_1_1_243	GCA_000620985_1_1_243	-	494728	.	PF11428.8	Protein of unknown function (DUF3196)	MSSEEDRMLKKMLVSANRVAPEDRQITNLLIDIYQTESKHYEAIQVGERFMRIVATDIDIIEKLAASYLKSGRIREYQHWLEDLAIVEETKTIEAVEQTDNLTYMSASFVIHPHIQFARWPLHDQLGFLERGSYVQLKGYFQDIHQLLQDEGITMEQRVALIEALHRLEDVSQYKLVVMGEEVTVIPAQIDLRVDNTFYNSLIERVTVELENENPSLAQEVETVIRRHQTATYPLTPDFGTVNEWCESYLEWFYRLNQEPLDNADVSQEVLKIDEVERYALENMSF*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0001	persistent	direct	high	860	0.999	GCA_000620985.1_00244
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	252288	252587	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	945	1244	GCA_000620985_1_1_244	GCA_000620985_1_1_244	+	494728	.	.	hypothetical protein	MSTLKALNDSKSEGLEKVLHTINHLSSSNIHIRKHLEVSHRQSFTIYDMLSDAKIGSITANYQADTITIQSQVHSDIRLYTITEPKDYLKLLFYLSDIK*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0002	persistent	direct	high	299	0.997	GCA_000620985.1_00245
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	253611	253856	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	2268	2513	GCA_000620985_1_1_245	GCA_000620985_1_1_245	+	494728	.	.	hypothetical protein	MDQKIWQDFRKDIVDDHQELPFYLDGKEWWISRLYGEEKSYLLTAPNSDTQFFKTAEELVEKGIVHGKTFIEQIPFLTLIK*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0003	persistent	direct	high	245	0.996	GCA_000620985.1_00247
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	254129	254314	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	2786	2971	GCA_000620985_1_1_246	GCA_000620985_1_1_246	-	494728	.	.	hypothetical protein	MVVIAITVCYVEAISVDELENKVKERLHELQLDHEVKGVNTSVTFTNYGTREYLAQITYVK*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	254377	254664	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	3034	3321	GCA_000620985_1_1_247	GCA_000620985_1_1_247	-	494728	.	2ZRR_A	Mundticin KS immunity protein	MVKWYGSGQERASEALVIISKIINALTVENHRPLVSIFEEAYRELEKPTQSPTLILSRLQLSVSGCLTKNEIVLPRETQELLSQLSSLSYIRYGG*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0005	persistent	direct	high	287	0.997	GCA_000620985.1_00248
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	254852	255328	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	3509	3985	GCA_000620985_1_1_248	GCA_000620985_1_1_248	-	494728	.	PRK05528	peptide-methionine (S)-S-oxide reductase. 	MEEIYLAGGCLWGVQAFIKTIPGVHKTEAGRANGNSDSLENQYDGYSECVKITFDSQTLTVESLMTYLFEIIDPYSINKQGEDIGEKYRTGVYSKNKKHLEAAQHFIDIRDDADQIAVEVCLLTNYLRSAEEHQDRLDKFPNDYCHIPDMLLKKYRKV*	mmseqs_cdd	nonviral_gene	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0006	persistent	direct	high	476	0.998	GCA_000620985.1_00249
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	255454	256293	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	4111	4950	GCA_000620985_1_1_249	GCA_000620985_1_1_249	-	494728	.	PDB:3HDF_A	Lysozyme	MNISKVGLDLIKEYEGLRLTAYKPVASEQYWTIGYGHYGPDVWAGQVITRAQADAYLRSDVRRFEKAVNSAVKVSINQNQFDALVSFTYNLGEGTLYSSTLLQYVNKKQFGNAADEFLLFVNAGGQPLPGLVRRRKQERALFLKAYNAILWRYAREDLNLRTKADWNSSVGATVPLGYAAQINYGVQSNDFVQVIFREKKYWYKESLTLYWYDQDPAVVYTVVTEIGFRGQSKWDSRIVAKRKKGDKVRVVGTSQNGWLKCVLDDTVGYIPNNSMYLVK*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_000620985.1_00250
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	256474	257286	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	5131	5943	GCA_000620985_1_1_250	GCA_000620985_1_1_250	-	494728	.	PDB:4OLS_C	Endolysin	MKVINNAVCRGVAGKRIGNVKGVVLHNTWDNKSANSHIERLGKMNNKQLEEGFAHYYVDEETIVRVEDTFNKAWHTANVEGNAYYIGIEVKGNRQTTKQVFLKAEQNAFKQAYDDLKYYNLPISRNTVRLHCEFTATECPKRSLIEHCGYDSNQKQPQAVIDKLKDFFIAQIKKQGNTDTIKPPAALKPQEVKRVAEKGIFYPNTRVAIKHTPTLKAKQEATLGKGESVIYDSYVKSNGYVWVSYIRNNGKRGYACSRDVKTGKAYGEFK*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0008	persistent	direct	high	812	0.999	GCA_000620985.1_00251
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	257290	257565	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	5947	6222	GCA_000620985_1_1_251	GCA_000620985_1_1_251	-	494728	.	PFAM:PF04531.12	Bacteriophage-holin	MKSYLGINWKVRIKSKIFWMAFIPAILFLCSKLLVLFGIVFDFTQIEERLLDIVGAVFSILVLLGVVVDPTTIGAGDSEQAQRYDELRGGE*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0009	persistent	direct	high	275	0.996	GCA_000620985.1_00252
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	257578	257799	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	6235	6456	GCA_000620985_1_1_252	GCA_000620985_1_1_252	-	494728	.	PFAM:PF10779.8	holin	MEKDIETEILVKLAKIEENTKGLDETTKIAGTAFHLAKELEKRQDRMDISNKWSWGFIITLGITLIGYFLTKL*	phrogs_hmm	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0010	persistent	direct	high	221	0.995	GCA_000620985.1_00253
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	257799	257951	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	6456	6608	GCA_000620985_1_1_253	GCA_000620985_1_1_253	-	494728	.	2XF5_B	GP23.1	MYKVVGNAYNSGRYTMDNLRLLVVAKMLTTQQFEELTSFGFYLSEMGDGD*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0011	cloud	direct	high	152	0.993	GCA_000620985.1_00254
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	257995	259560	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	6652	8217	GCA_000620985_1_1_254	GCA_000620985_1_1_254	-	494728	.	PDB:4DIV_C	Distal-Tail-protein	MVVKKIKFNHLDVNADLKPLSDLNVEFYDQDINTSVLRFKLTYFEKGIDLSSKKINTYIFLVAEDGSKVSDYLAVFNETEGIVSYTIPKDFLKHTGRVRGQVYLYQQDNIIVTREFSFMIKASLVNSFSSETKVEYIKTFDDLETVVKSKVIAIEEAIKGGTDYVSQMIETVKNGEKIITDVSNNAITTVTTKTDTLLQTIADNNVALKKDTYIYTDGNGFSREVSKGETDWYRITDAGNYSITKEEMSINAPPKGDSFNLIVNTSSPSLRDLTAVNSVSGAIYTNVLSSSGWSGWKQLLRDVDTSHWQKQATTNEDGTSINISGYNLLDVEDIKNFDGYVTSALNAPINITSGYVKRKYRSGYIEIVFAPHSGKQVYRNSYNAAAKVWVGWEKNVNASELAELKGTDTGWQPLKLINGVTASVAPMYRLYSNNNIYSLSFKGTMNAFTNRDTVIAKLPSTVIEKLDRSLTFLCLTSVNASTARFNRWIVELNGDVKFTASNYNTDGSSGAWNPLDITLTI*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0012	cloud	direct	high	1565	0.999	GCA_000620985.1_00255
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	259579	260688	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	8236	9345	GCA_000620985_1_1_255	GCA_000620985_1_1_255	-	494728	.	cd00840	Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	MNKQNKLVYQTTVNIEQELYRVRDAVNKLRKPNSVVVPFLTDTHAGVRNKNLSYLKKTGYDHMENLVNLTKILNCDYVVHGGDVIDGSSLTLADVHLSFEETVKRLMEIEVPVFMMRGNHDDNSLGDSYLANDLSHVISFDTLKNYLFDKRLHKSKLIDNPLEPGGSYGYYDDERNKIRVFFFDSFNTRQELLNGDYKFPLVSSKGCFANTQLNWMADKMKRIPSGYKAMIFSHTGLVDYRNSNSIIHPEVRNAGAVQALLKAFETGSKLSYKGTDKDFPIQVDIDFGGVATNVLAWINGHVHGDYLKEIPQTKIPSIANLCSKPDSTETYQYRKFGTIYEDSFTVFVVTPTQLDSKIEMVRFGAGRII*	mmseqs_cdd	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0013	cloud	direct	high	1109	0.999	GCA_000620985.1_00256
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	260702	262672	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	9359	11329	GCA_000620985_1_1_256	GCA_000620985_1_1_256	-	494728	.	PDB:4DIV_C	Distal-Tail-protein	MTVYQFKLSTTAVANQVELIRVRQDDDESQIFRATIFEDGKVKNLNGVSAEFNMVDAQHHIVVDDARIVDATNGIVEYQLRKEAMLSVGRCNAYFSFKSNKEVVYSTKDFNYNVIWSALSSPMHQGCDYVWTASDLIDSLKDWIEHAMGDFDDWFESVKEILASIDPGGVILNELLELKKKMAEIELKENTLDLKNSEVFFYSDLGLASNTIPGCFAIDDQRDYIYTYQSSTDIPTVTRTNSNGVYLDKMDIPNGKDMKSLGCDFAQGVANLWVEVGADLVRFTYTPGGNLDTSVNKTKITFDGSVNRKRFGVSIDNYQGVVSCIVDEMIVVYSLKDIGQQPIKSIKIDSDIMSSLCGFHYFDNKAFVLSSENSVRNPTYITTYTEDGRVINYKIDVFGDIEEEHYSTVRYPNGIQLLKNRTTNKLSLVFSVTRGRIGFRETQLFALHQKGNDLKRLFNLAQFGQNYRMMSSSGRSQLISEGTTELKNITRPGYYYITVDLATKLKDIPMHTGKHGYFLEVQPTNNWGIFIQTLKRNAQGTTVMTFERVINPSSNIIGEWNLSQGRMPNKISYWDETTKVLSSVRYPIEYYITSTEFNKLNDIPTEFKTGAGYWIEISTLGTNNAVVQTITKNGLSGFFQAKRIVSDEKIGEFKVL*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0014	cloud	direct	high	1970	0.999	GCA_000620985.1_00257
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	262685	263293	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	11342	11950	GCA_000620985_1_1_257	GCA_000620985_1_1_257	-	494728	.	PDB:3GS9_A	tail-protein	MKSGQWIGAIEPKTVSGFKASTSPRTAAGAFLYNFERPAAAHPEREDYAQAWYDKFKDLKQPGGKYGMPVAPGYQITSWFGNRDDPLNPGNIVTHKGMDFADKSGSPIFAAESGEVIASLPTASSGGFGEYIVIKHADDNCTGYGHLTTRMVNISKKVTKGQQIGTMGSTGQSTGPHLHFSVGADLWGPYQDPAPYLGLKRP*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0015	persistent	direct	high	608	0.998	GCA_000620985.1_00258
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	263354	264244	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	12011	12901	GCA_000620985_1_1_258	GCA_000620985_1_1_258	-	494728	.	PDB:3GS9_A	tail-protein	MSPWDAKKGESRQPYQMVIMNKESLKESDHFLVMNSEGIGFINGDFDKDKFETAWTIDGEFNANYIRAGVLSGILIKGNIIKSSDEGDFQIVLDGGRLSFETKTLGDDPENQHGSAIAKITPTYGKSEGSDELKANGVAITQIPGQIFSINSGGQSGSRAVVQVPAESTMDSLKLNLYGEVRVVGDFYVNGIKIDGNGGTGGGNGGWNGQYPPEVTSDIDKRAWAIWSTLRGHSYSKAASAAILGNIQGESGPQMNPDTEQVGGPAYGLVQWDGSAYPLVGQPTDNGREYVQRLMK*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0016	persistent	direct	high	890	0.999	GCA_000620985.1_00259
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	264294	265445	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	12951	14102	GCA_000620985_1_1_259	GCA_000620985_1_1_259	-	494728	.	PDB:3GS9_A	tail-protein	MSVYFFDNKQQLIKMKNNRTLMQCLQEQEITSDKSDLLKDTLTVSCLYDSELEQAEYIAVRERKSVYSLYKIQEEEIDAEIMNFKGINFGLDELSNYIVKEEQSQKQTLTEIAKQVVKATDGEWHVTGIVNKVASATFQYISVKDALKTIQSLGCELLFRCEISGTGISKKWIELHDKIGKESTKRYEVGSTALKVVRTKNRSNIITSIVGRGKGEDVGDGKGKRLGFEKVDWKTPVVKPKGQAFLELKKLTEVHGIPMKNGGMRRREQVVVFDDIEDDKELLTATYQMLLDNSRQLVQFSSEVIGASSIGDRVSIHDYDKGYHYQTRVFSVKYDCLTNKVDTSLGDNLQGSSATTQLANVQNGVSELQSVKMNFYDSTEVSK*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0017	persistent	direct	high	1151	0.999	GCA_000620985.1_00260
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	265442	266209	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	14099	14866	GCA_000620985_1_1_260	GCA_000620985_1_1_260	-	494728	.	PDB:4DIV_S	Receptor-binding-protein	MYTFKDVKKDPFRKMKYIPTSAMRYDGFLLEDILEGYTTLKVEGREMTSIVLESTEAQIGAIITNQRLPARIITVTYKLQNKNALELQRDFKELMFRLYRDEDVAISFEDEPTTTYYGRFETADTVEGSSNNIISTFTLFCSDPYKYGAENITIGAINHHLHYPVTPMTVTAKMTKTSTLSIVNGSQTLKITSETLAVNDVVLFDFKNGKVFVNNVDRTNLLDLDSDFSNFQLKTDDRVTSDVATLSIVYRSVEL*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0018	persistent	direct	high	767	0.999	GCA_000620985.1_00261
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	266225	267610	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	14882	16267	GCA_000620985_1_1_261	GCA_000620985_1_1_261	-	494728	.	UniProtKB:A0A0R1V141_9LACO	Minor-tail-protein-	MGTNKTGMELNIDNNGFVSGITTAIDKTKEIADVSFGAAQKIAEMGSALAGIFDKIGVFSSISEGSKTAMGDIEGAIDNGLNNVFLEIAKTLKSADLGAFDELVTQINSVISQIVSVIDQGFGVIISYIPKLMEPVMVFLSYFQEHSETLIPIITALVAAFLTVGTVVVVLIKVAETIATVKASIDLFKDGLKLVSSPMGIAVLAIMALAAVAILVYENWEKISEFLSNLWTAIKEKAVAIFTAIVDFFKKWGGALLSILGGPIGIVVGLIIRHWDTIKAKTIAAFNAVANFLGDCWNSIVGFFQGGVDKVAGFIDKMIGVFNIIKEFSLVDAGKAIIDGFVNGLKAAWEAGKKFVSGIGDWIKDHKGPISYDKRLLVENGQSIMFGLDKGLQNGFGDVMSNVNGMSHSISASFTADASQSNTATTQPAQFVVNIGKQNFTAFVADISDAMGGETQINMQI*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0019	persistent	direct	high	1385	0.999	GCA_000620985.1_00262
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	267625	267912	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	16282	16569	GCA_000620985_1_1_262	GCA_000620985_1_1_262	-	494728	.	PFAM:PF12363.7	tail-assembly-chaperone	MTELKKIERMTFYEYTLKMTAFQLKMVDEDYVLHKAAWLAQQVKATKKMGKEMRPYYTSFEKFYDYAKRERMVLGQEEEALKDNDFSDLMMKANK*	phrogs_hmm	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0020	persistent	direct	high	287	0.997	GCA_000620985.1_00263
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	267972	268319	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	16629	16976	GCA_000620985_1_1_263	GCA_000620985_1_1_263	-	494728	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MELKINGEVKVFIFGIKFVRELDKKFFIENNGMKFGTGLSTKLIEIHSGSIVALADVLHCATSTEAKRPALEDIESYLESCDKIEKVFEETLAEIESNNAGKLIARDTKKAMKTK*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0021	persistent	direct	high	347	0.997	GCA_000620985.1_00264
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	268401	269009	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	17058	17666	GCA_000620985_1_1_264	GCA_000620985_1_1_264	-	494728	.	PDB:5A21_H	major-tail-protein	MKYFSNAATAEQAKQTKIKKTIKREILKMTEAKKGIDVILLYRILKNEKDGAAWKMAFQTEHSNAKSRDNEAVPTKDGPLQNMAPIVYEFSATSIIAKGDTYIDELDDAFDAAEIIEIWEIDKAEKGTEKNSDKFKATYFQGYVSSFSKTSNSEDGLALEMEFAINGVGQKGYATLTEEQANVVSYVFKDTVKAEEPAGNNN*	hallmark_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0022	persistent	direct	moderate	525	0.862	GCA_000620985.1_00265
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	269474	269965	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	18131	18622	GCA_000620985_1_1_265	GCA_000620985_1_1_265	-	494728	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MSTQDNLMIELENYKEVRPSDLSMRKTVKNVELLITAYKQEAIKAGVRAAPKVTASYSIVPPTYGNDFHSTTESAALDNIEKFEKMEYFVKKINQGLERIECVLDPERRERRKVIFVDKFIIGSNKTRIMEKLMIEHTTYHMELNMAVTDFACELGIEQRVTT*	mmseqs_cdd	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0023	persistent	direct	high	491	0.998	GCA_000620985.1_00266
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	270013	270246	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	18670	18903	GCA_000620985_1_1_266	GCA_000620985_1_1_266	-	494728	.	.	hypothetical protein	MNKTMINNRYYIKNKNKIEFVKKLADARLRGHEVIKIKTEKQVRSSADRDHYSYQRYKHHETSVEFLYVALLEITCQ*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0024	persistent	direct	high	233	0.996	GCA_000620985.1_00267
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	270524	270721	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	19181	19378	GCA_000620985_1_1_267	GCA_000620985_1_1_267	-	494728	.	PFAM:PF10078.8	transcriptional-regulator	MITIAELRAKNGKMSQRALAREIDTTQTSISNWEKDPLSMNAENIVKLCLYFNVTSDEILGIKRE*	phrogs_hmm	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0025	persistent	direct	high	197	0.995	GCA_000620985.1_00268
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	270873	271571	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	19530	20228	GCA_000620985_1_1_268	GCA_000620985_1_1_268	+	494728	.	PDB:2FJR_A	Repressor-protein-CI	MIYYTYQRGVEMRTLGSRIKFLREKKHLTQTELAEKVGAKTYTTISKWESDENFPKGKDLKILAELFGVSADFLLGIEPSVQTFQTSECHDTDIELPLYGDVAAGALAELESIDVWDVKTVKLPKFLLPQSMLSDKLFAMHVNGDSMDKIIPNGSLIVVKPIEQSLYNDGDIVVFSYNGEYSLKRYRPNAMEGFVLFEADSINPDFKNIPISKSELFEANMYGKVVFCGITF*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0026	persistent	direct	moderate	665	0.951	GCA_000620985.1_00269
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	271699	272328	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	20356	20985	GCA_000620985_1_1_269	GCA_000620985_1_1_269	-	494728	.	PF01810.18	LysE type translocator	MENYFTSLLVGLVIAMPVGAISVEMTKQTLKNGFIHGWAVGIGGMTIDVALIIALYLGFANILSLPYIQSPLWLIGAVFLVFIAYDSIKNANKDINLAGEKTNKSFFKTYRNGLIVAVSPGNLVFWVTVFGTVLTDSYTKSNSQFFIVALGILSGILLHDVSLLSIVSLTRKIMNRKAIKWSSIVAGILLLGFACYFLYEFYMSVKAFF*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0027	persistent	direct	high	629	0.998	GCA_000620985.1_00270
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	273202	273702	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	21859	22359	GCA_000620985_1_1_270	GCA_000620985_1_1_270	+	494728	.	PF04173.13	TQO small subunit DoxD	MFNWLRSSKIAMPILTVLRVYLGVQWFTSGFHKIFGDTPFDAGGFIGNIVKNPVVGPEGNQLYPAYTWFMETFAVGNSQFFSFLVMWGELLIGLGLIVGLFTSTAAFFGIVMNFLFLFGGTVSVNPLYLILGLLVLVGGRNSGTIGLDFYFRKYVSPKLFKQRQHR*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0028	persistent	direct	high	500	0.998	GCA_000620985.1_00271
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	273818	274420	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	22475	23077	GCA_000620985_1_1_271	GCA_000620985_1_1_271	+	494728	.	PRK07578	short chain dehydrogenase; Provisional	MKKALIIGGTGTIGSAVAKALSTTHEILIASRSSEYQVDLASPTSIKALFDKVGTVDAVIISAGAAHFGPLATMTPEDNLLSANNKLLGQVNTVLIGKDYVADNGSFTLVTGIIMDEPIKDGASAAMANAGVKAFAKSAATEMPRGIRINTVSPTVLDESWSIYKDYFVGFETVSSNKVANAFVKSVNGVQTGQSFTVYQ*	mmseqs_cdd	nonviral_gene	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0029	persistent	direct	high	602	0.998	GCA_000620985.1_00272
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	274523	274876	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	23180	23533	GCA_000620985_1_1_272	GCA_000620985_1_1_272	-	494728	.	2HEP_A	SR384, AUTOSTRUCTURE, Northeast Structural Genomics	MFDQSEPINWHQLLNYAILRQRVQEKRSVFTMKVDLNRINALAKKKKEEGLTPAETKEQLKLRKAYLGEIRGQVLGTIDGLKILDKEGNDVTPDKLKHANSQKKHAGNILSNKIPRV*	hhsuite_tools	nonviral_gene	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0030	persistent	direct	moderate	261	0.737	GCA_000620985.1_00273
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	274883	277000	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	23540	25657	GCA_000620985_1_1_273	GCA_000620985_1_1_273	-	494728	.	PDB:5D5H_A	DNA-topoisomerase-1	MKIVILAEKPSQAKAYAHSFKSKQKIEGGFLIKDALFEDEVAITYGYGHLVELQAPESYKPEWKKWSLNELPMFPESYQFKVAKDKRAQFRIVKRLLDEADEIIVATDSDREGENIARSIIKVSGNEHKPTKRLWINSLENDEIRKGFESLRPGEDYFSSYIEAQTRQISDWLIGMNISRLYTLLLQQKGLSGVFSIGRVQTPTLYLIWQRQQEIENFEPQTYFEAYIHVNAAQGTYVGKYKDTFKTLPELIDFFKGFDVIHQQEQAARIAKVETKEKKEYAPRLYSLSDIQSQANKLYKVSPATTLKIVQTLYEKKLVSYPRTDCHYITPAEYAYLKKNLEGYCERAGVEIKDPQNYATKRHVDASKVQEHYAIIPTKKIPTAAALAKLGPMEQRLYHLILRRTLAIFAQPYIYDETIILTDVNTQIFKTTGRMIRQLGWKEIIGAAKKKTDEEKLPIVELNEVVQSRLYEKEAETKAPPAYTEGTLITAMKNIGRTAEDEAKAILKAIEGIGTEATRASILETLKRQDYIEVTANQLQVTAKGSILCEAIVGVEISSAEMTAKWESYLKKIHDKTGTQEAFLGSIQRFIQHLIATVPEQIGTEKIAIPMTEEPLGICPSCGASVLEKFKVYGCEKCDFVIYKKILNKKISRPMCSKLLKSRRTALIKGFLSKKGKKFNAVLILDDANKVAFEFITFKPKVKKS*	common_virus_hmm	common_virus	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0031	persistent	direct	high	2117	1.0	GCA_000620985.1_00274
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	277466	277690	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	26123	26347	GCA_000620985_1_1_274	GCA_000620985_1_1_274	+	494728	.	PF09953.9	Uncharacterized protein conserved in bacteria (DUF2187)	MMALSSISFDNRSKQVDKEVPFNIGDGVSFIRGEVMFKGTVTKMYDNSALIELFDTPNYEFNNTVCNFKRMQLL*	hhsuite_tools	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0032	persistent	direct	high	224	0.996	GCA_000620985.1_00275
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	277942	278172	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	26599	26829	GCA_000620985_1_1_275	GCA_000620985_1_1_275	+	494728	.	.	hypothetical protein	MEHATKVGIKGNYYDISIREVISNIAFTIVYNPLTITDIDQADEWVTSSANGKCIHKISAIEHDTRKNTRRIFLKE*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0033	persistent	direct	high	230	0.996	GCA_000620985.1_00276
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	278274	279209	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	26931	27866	GCA_000620985_1_1_276	GCA_000620985_1_1_276	-	494728	.	pfam13536	Putative multidrug resistance efflux transporter. This is a membrane protein family whose members are purported to be related to the DMT or Drug/Metabolite Transporter (DMT) Superfamily. Members are all uncharacterized.	MRAIIIGIIAAFFFAFTFVINQLMSDLGGDWMWSASLRYFFMVPFLLLLVLFKSGFKKMWSEIKKRPFAWFIYSQIGFGLFYAPLCFAADYSPGWLVAGTWQITIVAGALMSPLFYEKIQTATGIVKVKGRIPLTGLCWSGVIIVGIIIMEVSHATTVGLKGIVLGTLPIIIAAFAYPYGNRKMMEVTEGRLNVFERVLGMTLCSLPTWLILSIIAGTRSGIPSMSQVSNSIIIALFSGVIATLLFFKATDLTQGRMKELAAVEATQSMEAVFSFILGLLILNSAVPSFSAWIGLIVVVFGMTAHSLSQRN*	mmseqs_cdd	nonviral_gene	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0034	persistent	direct	high	935	0.999	GCA_000620985.1_00277
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	279334	279858	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	27991	28515	GCA_000620985_1_1_277	GCA_000620985_1_1_277	+	494728	.	.	hypothetical protein	MTEHFDITTHTLIAYQDQKLRNSKIFLAFRWIYSLLLTFVVTMLAFLYDVNLVVIGWLALGLFLVFTFIFCFTPLFAMVLTGISRKMTKVERFPVTIALTKEGLTQTINDRVLFINWSDFKRIYNDDEYFFLATKNDVCPLPLSSTENTKRLIYQNIKANAPKCKGIEKLKISK*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0035	persistent	direct	high	524	0.998	GCA_000620985.1_00278
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	CDS	280042	280533	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	28699	29190	GCA_000620985_1_1_278	GCA_000620985_1_1_278	+	494728	.	.	hypothetical protein	MIVTLILIGLTLFAIGFLFIVIRFFNHKPKRKFIITALVGFLLVAIGVFLTPGTETDKPTESKKTTESSSTTHSSNIDSTSNSQTTSTVPIQSSTTTSTTTENSLSSTSSSSNTNTTPDTTDTVTSTSIETTTESSTSTTESSSSTNEQIENATTDSTPEGTE*	.	hypothetical_protein	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_CDS_0036	persistent	direct	high	491	0.998	GCA_000620985.1_00279
GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote	cenote	CDS	1	1505	GCA_000620985.1	JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985.1_JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985_1_27	GCA_000620985_1_27	1	1506	GCA_000620985_1_27_1	GCA_000620985_1_27_1	+	2430	.	Uniprot:T2PM72_GARVA	tail-tape-measure-protein-	KVDAETWNSMINGGMGPTLNALAKTFDMTTGEMKAALSDGTISVEQFQDSLIQLNEKGGGGLKPLSKIAQDAMGGIKTGISNAKTAVVRGLATVITAINDNLQKMNLGSIGEIIGKIGSSFEGAMTTFAAYIPVLMGKIGAFVSFFKAHSETIIPIIKVVVATLLTFGTLVSVIRAVQNAIVAFNLVMTVMTGPIGAVILAIGVLVAIGMYLYNNWSSIGPLLSGIWQTFKDTTVAIFNSVVEFFKKWGPMMLIALGGPVVWIVALIVKNWDKIKAVTSTVWNGIKDFFIGLWDGIKSIFSNVLNWVVRFVSSQFYAAVGLVKSIWGGISGFFSGMWDKVVGLFQGGVNNVKGWIDKLLGVFNKIKEFSLADAGRAIIDGFVNGLKAAWEAGKKFVSGIGDWIKDHKGPISYDKKLLIENGQSIMFGLDKGLQGGFGDVMGNVNGMAKSIGSSFTADANQANKTAVTPLDLSVKIGKQDFKYFVEDISQQMGGDAQINKQF*	hallmark_hmm	common_virus	NaN	.	0	2430	GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote_CDS_0001	cloud	direct	moderate	1478	0.982	GCA_000620985.1_02502
GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote	cenote	CDS	1517	2284	GCA_000620985.1	JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985.1_JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985_1_27	GCA_000620985_1_27	1518	2285	GCA_000620985_1_27_2	GCA_000620985_1_27_2	+	2430	.	PDB:4DIV_S	Receptor-binding-protein	MYYFKDTKKYPLETFKFIPTSAMFYDGLLLEDLIEGYTTLKVEGREMTSLTIDSTAVKVGAIVSNQKINTRSITVTYQLKNKSSQAIQEDFKKMMAHLYREEDVAIYFEDEPTTLYYGRYQSAESVDGSSNSIISSFTIFCSDPYKYGSQIVSAGVINTVLRQPVMPMKIEATVTKSGPMKIVKGSQSISMSRANFKVGDNVVIDFVVGKVFVNNLNRTRFLDLDSDFSNFKLNSNDKITCSSANLKIYYRSVDL*	hallmark_hmm	common_virus	NaN	.	0	2430	GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote_CDS_0002	cloud	direct	high	767	0.999	GCA_000620985.1_02503
GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote	cenote	CDS	2281	2427	GCA_000620985.1	JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985.1_JHZM01000031.1	GCA_000620985.1|JHZM01000031.1	GCA_000620985_1_27	GCA_000620985_1_27	2282	2428	GCA_000620985_1_27_3	GCA_000620985_1_27_3	+	2430	.	.	hypothetical protein	MSVYFFDNKQQLIKIKNSRTLLQCLQEKEITSDKSDLMKDILTVSCLHD	.	hypothetical_protein	NaN	.	0	2430	GCA_000620985.1|JHZM01000031.1@region_1_2430@tool_cenote_CDS_0003	cloud	ambiguous	low	5	0.034	GCA_000620985.1_02503
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	2	517	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	3	518	GCA_000620985_1_4_1	GCA_000620985_1_4_1	-	142449	.	.	hypothetical protein	METHKIEAILSADDRNFSSGMSRAEKAAGAVGNGADKAGKATGRMGVGLGTMLKGAGVFAIVSAGINGVKGATSGAIDRFDTLNNSTRSFENMGFKTKEITGTMDALKGSIQGLPTPLDGAIKNVQLLAASTGNLGKSQEVFAAMNNAILGFGGTTDQVQNTVTQLSQALSN	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0001	cloud	ambiguous	low	237	0.459	GCA_000620985.1_01031
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	533	793	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	534	794	GCA_000620985_1_4_2	GCA_000620985_1_4_2	-	142449	.	PFAM:PF12363.7	tail-assembly-chaperone	MSLYEYTMKMTAFKLKLVDQEYILHKTAWLAQQVKATKKVGKDIKPYYQSFDKFFDYAKQERSALGETNEELKDSNLSNLLRKANK*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0002	cloud	direct	high	260	0.996	GCA_000620985.1_01032
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	880	1227	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	881	1228	GCA_000620985_1_4_3	GCA_000620985_1_4_3	-	142449	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MELKINGEIKNFIFGIKFVRELDKKFFIENNGMKFGTGLSTKLIEIHSGSIVALADVLYCATSTEPKRPSLEDVEQYLETCEDIEKVFDDTLAEIESNNAGKLIARDTKKAMKAK*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0003	persistent	direct	high	347	0.997	GCA_000620985.1_01033
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	1268	1777	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	1269	1778	GCA_000620985_1_4_4	GCA_000620985_1_4_4	-	142449	.	PDB:5A21_H	major-tail-protein	MAEAKKGIDVILLYRVLKNEAKEAAWKMAFQTEHSNGKSRDADSTATKDGPIQNMAAIEYDFSATSIVAVGDKHIDELDDAFDNSELIEIWEIDKAEKGTDTDVDKYKATYFQGYVSSFSKTPNSEDALELEIEFAINGIGQKGYATLTTNQAEVVSYVFKDTVKVEGS*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0004	cloud	direct	high	509	0.998	GCA_000620985.1_01034
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	1790	2179	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	1791	2180	GCA_000620985_1_4_5	GCA_000620985_1_4_5	-	142449	.	PDB:4ACV_B	Antigen-protein	MIKTRDQSIFDEVFKRCQSLGYVTYDYKPMNEVGYPFVEIEGTTTNHVANKTDVKGSIELTLSVWGLQQKRKQVSDMASNILYQSSLIQATDGYYWSLGYNQSTIQLMDDTTTNTPLKRAIITLTFTVR*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0005	cloud	direct	high	389	0.997	GCA_000620985.1_01035
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	2185	2571	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	2186	2572	GCA_000620985_1_4_6	GCA_000620985_1_4_6	-	142449	.	PFAM:PF04883.11	putative-tail-component	MSRAFKITGTKELQKALRAKTSLQDVKNVVKKHTVGLEAGMKRESQNVLTGHYEGGKFVKPTGQTKRSITSNFSENGMTGRVGPTTDYSEYLFYGTRFMAKRDFMSKPYKRQKTIFIKDLSALLKKVK*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0006	cloud	direct	high	386	0.997	GCA_000620985.1_01036
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	2564	2878	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	2565	2879	GCA_000620985_1_4_7	GCA_000620985_1_4_7	-	142449	.	PDB:5A21_F	head-closure-knob	MRYNDEVTFVKKGKQQYDPDKGEWSDGAKTETVANVNVTDIGTDRSLVIFGNIRQGAKVIRTLPLFDVPEFDYIVIEGLSYQQVTLRSPLFRNSIILEEVTVDE*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0007	cloud	direct	high	314	0.997	GCA_000620985.1_01037
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	2875	3222	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	2876	3223	GCA_000620985_1_4_8	GCA_000620985_1_4_8	-	142449	.	CDD:cd08055	Head-Tail-Connector-Protein	MSVLEDVKKMLGGNVDEQLEVINRRTTERVVSLIGLEDDNKKYVEIVAAVDTIIYEVSLKRFNRIGNEGMQSYSQEGLSISFPDSDFDEYQDELSRWRKKISDETDGKFGRVSFV*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0008	cloud	direct	high	347	0.997	GCA_000620985.1_01038
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	3227	3445	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	3228	3446	GCA_000620985_1_4_9	GCA_000620985_1_4_9	-	142449	.	PFAM:PF16323.4	major-tail-protein	MGQSDTLTATVVPENAEDKTVTFTSGNDKVATVTPKQGKVTAVAKGATEIEGVTANGIVVKLPVTVTEPAGG*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0009	cloud	direct	high	218	0.995	GCA_000620985.1_01039
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	3493	4305	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	3494	4306	GCA_000620985_1_4_10	GCA_000620985_1_4_10	-	142449	.	PDB:4AN5_F	Major-Capsid-Protein	MTTKLVDLVNPEVMAPIVSYELKNALRFTPLAQVDNTLTGTPGDKLTFPAFTYIGDATDIAEGEAIPLDKIGTTTKEVKVKKAAKGTEITDEAALSGYGDPVGESNKQLGLSLANKVDNDLLTAAKETTQKATIEATVEGLSTALDVFNDEDGQGYVLIVSPLDASKLRLSAGKEWLNGTELGAERLISGSYGSLLGAEVVRSRKLAEGEALLFKVVANQPALKLVSKRAVQVETDRDITRKVTIITADNHYAAYLYDETKVIDLTIAKK*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0010	cloud	direct	high	812	0.999	GCA_000620985.1_01040
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	4307	5008	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	4308	5009	GCA_000620985_1_4_11	GCA_000620985_1_4_11	-	142449	.	PDB:6B0X_d	Major-Capsid-Protein	MEQDNLLKLNIQYFAEEGDGGSQGGSDQTNGDETGTGEDGATNGATDDKGSDTGTDDNTAKVLEKLKARIGKEQAEKNETKTQLEQAMARIQELEQGKKGVKEKSAEEKLAEAQQQKDDEIASLQKQIKLSSMTQEADEVLKEGGLVVPKDVLKLIVSDDETKTFDNVKTFLTFLESQQQAWETKRNTGTTPKKTGGTQGTVTTEQFNAMSYLEKAKLASEQPENFKKITGGH*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0011	cloud	direct	high	701	0.999	GCA_000620985.1_01041
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	5097	5309	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	5098	5310	GCA_000620985_1_4_12	GCA_000620985_1_4_12	-	142449	.	.	hypothetical protein	MNLVKIDKGLHVNGTRIEHFSDVNIASNMDGLTKFTISFYGTLDGVDNIEPSLEFKSSKNGIGMSKTNEG*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0012	cloud	direct	high	212	0.995	GCA_000620985.1_01042
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	5312	6337	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	5313	6338	GCA_000620985_1_4_13	GCA_000620985_1_4_13	-	142449	.	PFAM:PF06152.10	minor-capsid-protein	MKSSSYWKKREEKAIQERIDFDTEKALKIKRMLDQTMKDIEQDILADMSRYSLGTSTDFPEVMQRVSDFEVKEFSSIAKQMVKDKDFSKQANSLLKVYNLKMRINRLEYIKSKIGLATVSLGEDLIKYFDEVFTEAVINEFKRDAGILNNATGSSVSYLKQARRIVDDSSFVNAYSRNVWSNTQLLQLDIEKLLFKHLATGSHSRILAADLRKSFDVSKYQAERLMRTEVANAQINAQKDSYSTNEIDMYEFIAEPSACKLCKPLDGKKFKVKDMEKGKNAPVMHPNCRCSTAPYVDDKAFYDDLLNRGVINEQEYKEAFETTKAANDAFDELLNKRKGRR*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0013	cloud	direct	high	1025	0.999	GCA_000620985.1_01043
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	6337	7704	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	6338	7705	GCA_000620985_1_4_14	GCA_000620985_1_4_14	-	142449	.	PDB:5A20_A	Portal-Protein	MEYMKKGFEPFEFPRDEEITGEVIQEYIDKHTAALRRLKVLNDMYKGNAAIFERDNKALHKPDNRIDINFPKYITDTFCGFFNGIPVKKKHEDETFSEAITKFDNMQDMQDEDAELAKLVSIFGYAFELLYQDENTQTNVVSVSPLDMFIVYDESIASKPLFAVRYGLNSRTDAVEGVLYTEEAFTQFKADGDNLVFGETKENIYDGLPVIEYIFNKERIGIFETVKSMIDAHDKALSEKTNDVDYFSDSYLKILGADLDDETLVAIRDNRIINLPNAQTGVVVEFLDKPDSDAQTENLLNRLKEHIFQIAMTANISDENFGSSSGVALAYKLQPMNNLAAAFERKFQAGMNKRYKLFASLLTNVPDKLSDAWSDIEYKFTRNMPKNILEEAQTAVQLATIASKETALSVLSVVPDVRAEIDRMDSERKDSINLLDYQQEVPEKETVEIVEKEDS*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0014	cloud	direct	high	1367	0.999	GCA_000620985.1_01044
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	7705	8988	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	7706	8989	GCA_000620985_1_4_15	GCA_000620985_1_4_15	-	142449	.	PFAM:PF17288.1	Terminase_3C	MMMVKKLSELIPKPFHSVWSATLSEQILNIVCKGGRGSGKSSDIAHVITQLLMRYAVNAVGIRYVDNTLEQSLYEQMKWAIEQQGVTHLFKFNKSPLRITYIPRGNYMIFRGAQNPERIKSLKDSKFPFAIGWIEELAEFKNEEEVTTITNSLLRGELGNGLFYKFFYSYNPPKRKQSWVNKKYETSFQPENTFVHHSTYKDNPFIAKEFLKEVEAARERNPRRAEWEYDGKAIGSGVVPFDNLKVVAGSITDDMTANFDNVRNAVDFGYATDPLAFVRWHYDKKHNCIYAIDEYFGQKISNRQFAKWAQSKGYQSDEIYADSAEPKSIAELRQEHSMPRVIGVKKGPDSVEYGEEWLDDLDAIYIDPIRTPNIAREFENIDYQTDKDGNPKPRLEDKDNHTIDATRYAFSRDMLSGNKIKLFKGGL*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0015	cloud	direct	high	1283	0.999	GCA_000620985.1_01045
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	8975	9427	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	8976	9428	GCA_000620985_1_4_16	GCA_000620985_1_4_16	-	142449	.	PFAM:PF03592.15	Terminase-small-subunit	MRKLSLKQQIFADEYIITGNATKSAIKAGYSEKYANTNASKLLQNTTIKAYIEKRLAELKKERTLTMEEALELTSSIARGEPQRFVTRSKDPKTGDVLEEEVNEFSAGFKERNQALEHFYKINAAFIDKQQVELSEVPTFIDDISGDDDG*	hallmark_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0016	cloud	direct	high	452	0.998	GCA_000620985.1_01046
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	9457	9726	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	9458	9727	GCA_000620985_1_4_17	GCA_000620985_1_4_17	-	142449	.	.	hypothetical protein	MNKTSYMQIDLFELGKQLEAGNAENLFMESGDSLICCAGCKVSINSIANNKWFLRCEQEERSEAVKNITVTLDSKELGAVCGYRPEVSE*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0017	cloud	direct	high	269	0.996	GCA_000620985.1_01047
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	9782	10129	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	9783	10130	GCA_000620985_1_4_18	GCA_000620985_1_4_18	-	142449	.	pfam19791	Family of unknown function (DUF6275). This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria and their phage. Proteins in this family are approximately 90 amino acids in length.	MVEQRLPNPCVTGSSPVISVEKIKGVIQMDNEQFVNYCKELVYKYTKEKLGTGIAFTKDDVYVVWLSKTLQNNKALLSTNVSDGMYYEVTYNGDKQEAYFDAYKKQENIKYDLAN*	mmseqs_cdd	nonviral_gene	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0018	cloud	direct	moderate	264	0.759	GCA_000620985.1_01048
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	10574	11062	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	10575	11063	GCA_000620985_1_4_19	GCA_000620985_1_4_19	-	142449	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MLEQIELIDKIQEYRDTQPSDLNLKLTEESIVLLITAFNKEVLKAGGRIEPKVTPGYSIMPPSFSNEFHSSTESAALDNIENFEMVDYFFNKIQMGQESIDCVLNSDRKSRRKRIFAMRFIQGMDRPSIMEELAIETTVYHEDMAMAITQFACALGIEVKKS*	mmseqs_cdd	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0019	cloud	direct	high	488	0.998	GCA_000620985.1_01050
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	11062	11250	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	11063	11251	GCA_000620985_1_4_20	GCA_000620985_1_4_20	-	142449	.	.	hypothetical protein	MRGVAVFTFKDMSQITLDIEDTEGCLFALGGLTMIVVNETRSISYNTSDIAQVEINDCGEDE*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0020	cloud	direct	high	188	0.995	GCA_000620985.1_01051
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	11247	12170	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	11248	12171	GCA_000620985_1_4_21	GCA_000620985_1_4_21	-	142449	.	PF07659.11	Nucleotide modification associated domain 1	MIYEGKEYKEVTDGSAEIGDLIHVTNTSGAECDVWCFSNDDNFETPCVGGALPGSYYCLDNEFDDYKRYRYLKDVEETPVKFKSGDRVRLTEFELNGQINFGNFNGYVDGEKFDGDYKVKFDDGSFVFFPQSSLELIKSYTIGQLKACEDFKKMIDELKAIGPLRNDVGVTPTNAVPKKVLKSPLKKEQIIPLTNPKKEHELINQTSKNIKQTDTVNSPSLSENINDLFAEIKNIIVYKNENYGDSFSKQYKKYGIVSVEMRLNDKFMRLEQLVKGEKDKVGESIEDTLKDIIGYATLALIELKDKG*	hhsuite_tools	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0021	cloud	direct	high	923	0.999	GCA_000620985.1_01052
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	12167	12652	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	12168	12653	GCA_000620985_1_4_22	GCA_000620985_1_4_22	-	142449	.	.	hypothetical protein	MTLSEDKAKKTALILKINNLIDKHRRENRRKVFGTEETVEVGVKLACGCDTCSEIEKLGNELSELRTRKEEDRIVKKSYTYTVSKKGEKTKIYKTIKSLSKHLDFEIGMIESRFRRCVNNEVEVNDFVIKRKVIAKSYKYKKKAKESDLLRSSILEKEAYL*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0022	cloud	direct	high	485	0.998	GCA_000620985.1_01053
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	12664	13332	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	12665	13333	GCA_000620985_1_4_23	GCA_000620985_1_4_23	-	142449	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MHKLAKIHRFKHHEGQTLIYATIDELVSEDKFNQFRNANTGYLEVDIDFKDNRNISVEQRKKIYALLRDISRYNGHGVSRNKETLKNDYIADKRIEPFSLSDTSVSNAREFISYLIELCFLYDIPFKNKGIHMTDDINRYLYLCLKFRKCAITGRPGEVHHIDTIGAGRDRRHVDHSQHRLVCLSREMHIKAHTMGWEEFAALHHIDGIRLTAEQVKEIKYK*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0023	cloud	direct	high	668	0.999	GCA_000620985.1_01054
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	13301	13543	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	13302	13544	GCA_000620985_1_4_24	GCA_000620985_1_4_24	-	142449	.	.	hypothetical protein	MRYMLRNNKKMEFIKQLADARKRGHKVIKIKTETKTRGSAERDAYSYKRYKKHETSVDLIYVALIEMSDKHAQTSKNTQV*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0024	cloud	direct	high	242	0.996	GCA_000620985.1_01055
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	13544	13957	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	13545	13958	GCA_000620985_1_4_25	GCA_000620985_1_4_25	-	142449	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKLTFDIEPVAQGRPRFSSFGKHMRAYDPPPSAMFKGQLKQMVMPMLPTDFVPYDTAIKVDIAFYRQDKKRLSKSEKELKEKGKYRPVTRPDVDNYAKGVLDALSGIVYTDDNIIVDLHVSKHYSDEPRIEFEIEVI*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0025	cloud	direct	high	413	0.998	GCA_000620985.1_01056
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	13967	14173	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	13968	14174	GCA_000620985_1_4_26	GCA_000620985_1_4_26	-	142449	.	.	hypothetical protein	MREANRLAAIQKITKEVGVPTSIREYAYDNDKFNFWVGNQELYGTVYHGELKIEWSKTVGGQKQLTLF*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0026	cloud	direct	high	206	0.995	GCA_000620985.1_01057
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	14175	14654	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	14176	14655	GCA_000620985_1_4_27	GCA_000620985_1_4_27	-	142449	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MNKTMLTGRLVKDVDLKYTQGGSAIATATVAVKRGYKNKEGEYESDFPRIKAFGKTAEFFANYFKKGDVVEICGSIQTGKYEDSDGKTIYTTDIVADGYGGVGFALKQSHDNAQQTQQQNGNQYNQNSQSGSQGQTSNFSNPFASGGQSYNIDDKDLPF*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0027	cloud	direct	high	479	0.998	GCA_000620985.1_01058
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	14655	15098	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	14656	15099	GCA_000620985_1_4_28	GCA_000620985_1_4_28	-	142449	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MREMFFRAISKKTGEFVYGVPAPNSFGKYIFMVCLTLDDTCAYPMSKLPDFCEEIIPETLGEYSGVRDGTGEFIFEGDSVEFCDFDSLRTGGNTSDKTRKAKVVFIQGGYFVKDGDYEALLYDALINDSDLTIIGNIYQNKDLLEDK*	mmseqs_cdd	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0028	cloud	direct	high	443	0.998	GCA_000620985.1_01059
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	15095	15277	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	15096	15278	GCA_000620985_1_4_29	GCA_000620985_1_4_29	-	142449	.	PFAM:PF06289.10	flagellar-protein	MKFIKVVGTPPIYIAVDKITVVYHSKNSGRTRIKFNSNDNYVLVSETPERIMQMIKDVTE*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0029	cloud	direct	high	182	0.995	GCA_000620985.1_01060
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	15274	15438	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	15275	15439	GCA_000620985_1_4_30	GCA_000620985_1_4_30	-	142449	.	.	hypothetical protein	MDIEIFDSLNQQGKLNVCRDLNSFVTYNGISKDTIIHIFKWLYSVSVEETEVTE*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0030	cloud	direct	high	164	0.994	GCA_000620985.1_01061
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	15428	15604	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	15429	15605	GCA_000620985_1_4_31	GCA_000620985_1_4_31	-	142449	.	.	hypothetical protein	MILCKFCYTDITKEEGYVSCYAQRELITQSASEESVVTDKDVEIFSKYAKVEVTDDGH*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0031	cloud	direct	high	176	0.994	GCA_000620985.1_01062
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	15601	15807	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	15602	15808	GCA_000620985_1_4_32	GCA_000620985_1_4_32	-	142449	.	.	hypothetical protein	MAFNYIGGAIAPHATINWLEKGVAKFKTVCYDEQEVYEATKAFVNQESSMNALADDFDVERYEKESAE*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0032	cloud	direct	high	206	0.995	GCA_000620985.1_01063
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	15829	16551	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	15830	16552	GCA_000620985_1_4_33	GCA_000620985_1_4_33	-	142449	.	PDB:4M4W_K	Replicative-helicase	MTHSLSDEELAEVRAQVERENNQFRIRAIEAENKKKQEAIFKGSYISERLKEATFDNYVSENKAQEKIRLTCKRYVEIFDKKKPMNLFLTGNYGTGKSHLAAAIHQELSSKKKMNNETLVDQYEYKSLFINLPDLVDELTSGYADNSRREKFESIKNVDLLIIDDFGAEKKDNERGSISSDLLMIFKNRDESKHTVITTNLKPKEILQRYGKRLAEVVLNDRVTTTLVFDWESERNINTW*	rep_hall_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0033	cloud	direct	high	722	0.999	GCA_000620985.1_01064
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	16532	17317	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	16533	17318	GCA_000620985_1_4_34	GCA_000620985_1_4_34	-	142449	.	PFAM:PF09681.9	phage-replisome-organiser	MFSKDITTSDIFVDMPMSSQLLYFHLGMEADDEGFIGNAKMLSRAYGSNNDDLTLLKAKGFIIMFDSGVSVVKDWNLNNRIRKDRIKETIYRSEKSLLTVDSLGVYQVGNQMTTSCQPIDNQMSAQYRLGKVRLVEVSKDIVPQSETVSPYKIIIDYLNDKTDKKFRASADKTKRFIDARLKDGFTVDDFKKVIDNKCFEWMIPGKQINGTPASNYLRPETLFGTKFESYLNQGGGESAIYSEDVNKFSNAPVTDDDTLPF*	rep_hall_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0034	cloud	direct	high	785	0.999	GCA_000620985.1_01065
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	17334	17957	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	17335	17958	GCA_000620985_1_4_35	GCA_000620985_1_4_35	-	142449	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MKTSESIVKLSVGLTKLRAEIVQPKKTANNPFFKNSYVPLNMVMAAIDNASKGTGVSYINMPVSGEKTIGTVLRINHESGEFMEFDPFMMPLEKNTAQAAGSALTYAKRYVLSAAFGIDSEVDDDGNAASGNNGNNNSNQQKQQSKPKEITKVQIDNIKTKANQLAEKNGGDLGAVYQALKIADVNTLSKSYADECIATLDQWLGGV*	mmseqs_cdd	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0035	cloud	direct	high	623	0.998	GCA_000620985.1_01066
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	17957	18202	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	17958	18203	GCA_000620985_1_4_36	GCA_000620985_1_4_36	-	142449	.	.	hypothetical protein	MNKKELQDKFELMEEMGADNFHFSLEEVLGKTDYTVVQSFYIGVKPAHEVLPELESFLEEQGYKDVIEKLEEIQLEASGDE*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0036	cloud	direct	high	245	0.996	GCA_000620985.1_01067
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	18202	18780	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	18203	18781	GCA_000620985_1_4_37	GCA_000620985_1_4_37	-	142449	.	PFAM:PF07352.11	Mu-Gam-like-end-protection	MTENKLPKFEAPEANVFDEITTEMQVSEAIGYIDWTSYQKQKNQEMYEEAVKPFVERIEHADAWLKEQNDKLETSVSNLTVNLKVYLMRDNQKRVESGKKARKTVKTPFGNFSLKKQQPQFVKEEKLLMEYAKAAGKVNEKTTVSIDWAAIKKESQIIDGKIIDPNGEVVPGVKVVEQDDKATVTLNKGVDE*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0037	cloud	direct	high	578	0.998	GCA_000620985.1_01068
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	18773	19036	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	18774	19037	GCA_000620985_1_4_38	GCA_000620985_1_4_38	-	142449	.	.	hypothetical protein	MKKRQRNKVKENFLSEEELMVVQLFRTCDKVWFTKHGFESRGEALSYGSILGEIKVVELTDSDVYSSKKGKVEVSAFRCNKEVANND*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0038	cloud	direct	high	263	0.996	GCA_000620985.1_01069
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	19111	19269	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	19112	19270	GCA_000620985_1_4_39	GCA_000620985_1_4_39	-	142449	.	.	hypothetical protein	MHVPDNYDQYEAYERRLSEAERAEEEELLAMEYGEIKCNQFRDEEFIHSKEQ*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0039	cloud	direct	high	158	0.994	GCA_000620985.1_01070
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	19278	19379	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	19279	19380	GCA_000620985_1_4_40	GCA_000620985_1_4_40	-	142449	.	.	hypothetical protein	MTILSFALSVIALALSTSTLTLAVYLYLAKKGK*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0040	cloud	direct	high	101	0.99	GCA_000620985.1_01071
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	19376	19621	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	19377	19622	GCA_000620985_1_4_41	GCA_000620985_1_4_41	-	142449	.	PFAM:PF10078.8	transcriptional-regulator	MRFTLTSIGEVQNNFSKILGERLLKITKVSEDTGIARSTLTRIYYKKNKAISFDVLVLLCDYLDIELSELISYKPLRKEER*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0041	cloud	direct	high	245	0.996	GCA_000620985.1_01072
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	19623	19769	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	19624	19770	GCA_000620985_1_4_42	GCA_000620985_1_4_42	-	142449	.	PF05191.14	Adenylate kinase, active site lid	MNIEESNKKIKVFKTRKVECRCGKEYHREVANYCSNCGAKLSTRKEDE*	hhsuite_tools	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0042	.	unmatched_CDS	none	0	0	.
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	19854	20129	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	19855	20130	GCA_000620985_1_4_43	GCA_000620985_1_4_43	+	142449	.	cd09725	Cas2_I_II_III	MYKPFVVTYDLGTPGANYEKVYETIQSFGSSIRFQKSVWLVKTNLTSEQMYLKLKPVLDNDDFIFICALEKNYYGWASQENWDFLRNDIFN*	hhsuite_tools	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0043	cloud	direct	high	275	0.996	GCA_000620985.1_01073
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	20130	20306	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	20131	20307	GCA_000620985_1_4_44	GCA_000620985_1_4_44	-	142449	.	.	hypothetical protein	MKITFEGTPEEIKEMLQAIGSSKEQKEISFNINDSVRKKYSQSESAEEPTRNGVIGHS*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0044	cloud	direct	high	176	0.994	GCA_000620985.1_01074
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	20389	20577	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	20390	20578	GCA_000620985_1_4_45	GCA_000620985_1_4_45	-	142449	.	.	hypothetical protein	MPITFWILVSLWSAVVFGGTLYYMFLQDYLAERKRYKAQDYRFNNLMREINSIRFDAKGEAK*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0045	cloud	direct	high	188	0.995	GCA_000620985.1_01075
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	20577	20873	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	20578	20874	GCA_000620985_1_4_46	GCA_000620985_1_4_46	-	142449	.	PF05595.11	Domain of unknown function (DUF771)	MEVQIEERLKIIENLLKRQNLNEMTNWTVKELVESTGRSSRYIKERLLHNSKFMPKLESEGVVIYPEGVGGAININTKKMLHFIEVNHSKIFGREVYK*	hhsuite_tools	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0046	cloud	direct	high	296	0.997	GCA_000620985.1_01076
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	20894	21070	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	20895	21071	GCA_000620985_1_4_47	GCA_000620985_1_4_47	-	142449	.	.	hypothetical protein	MQEFENVKQALRAAFDLVDAKGITTDGAVATTEQVQELIKENLVNLADLLGMEELYLD*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0047	cloud	direct	high	176	0.994	GCA_000620985.1_01077
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	21133	21321	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	21134	21322	GCA_000620985_1_4_48	GCA_000620985_1_4_48	+	142449	.	.	hypothetical protein	MGVKITGLDKLMKQLNDPKELAKKVIDNNNGIEIDCPNCQKKIKVPLNGTTCSCGKKIKLNL*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0048	cloud	direct	high	188	0.995	GCA_000620985.1_01078
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	21311	21466	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	21312	21467	GCA_000620985_1_4_49	GCA_000620985_1_4_49	-	142449	.	.	hypothetical protein	MTRNEEMKVKLSVEGIDAMQIKVGKLAEILKEAKTLADELASMEIEIKTKD*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0049	cloud	direct	high	155	0.994	GCA_000620985.1_01079
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	21480	22214	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	21481	22215	GCA_000620985_1_4_50	GCA_000620985_1_4_50	-	142449	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MQTIERTITSNEVSEMVGKEHSKLIRDIRTYVGYLAEAKIGSGDFFIESSYSDSNKQERPNYLLTKQGCEMVSNKLTGAKGVQFTARYVSRFNQMENHIKQQSDTSNLSPELQMFNGIFQSLVKQEQATKQLESKVDNISDIVGVNYTNWREECNKLINKVVNVRGGFDEHKNVRSEIHKEVDKRAGVSLSIRLTNKRRRMADNGVSVSQRNKLSKTDVIAEDKKLIEIYTVVVKELAIKYKVF*	mmseqs_cdd	nonviral_gene	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0050	cloud	direct	high	734	0.999	GCA_000620985.1_01080
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	22231	22527	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	22232	22528	GCA_000620985_1_4_51	GCA_000620985_1_4_51	+	142449	.	.	hypothetical protein	MYFLSSIINVKGGDIDMNATELEKIISAKTNEVYDTGGLATLTTVLPSLFEQADVPLNEKQLMLLNSSSELLAKSITKNTLVATINLLVEIGVLKGEN*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0051	cloud	direct	moderate	248	0.835	GCA_000620985.1_01081
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	22484	22612	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	22485	22613	GCA_000620985_1_4_52	GCA_000620985_1_4_52	-	142449	.	.	hypothetical protein	MQIQNKKPRTKKVQSYKKIDANKLSCGKLNFHLLKHLSQPKD*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0052	cloud	direct	high	128	0.992	GCA_000620985.1_01082
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	22624	22869	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	22625	22870	GCA_000620985_1_4_53	GCA_000620985_1_4_53	-	142449	.	PFAM:PF13744.5	transcriptional-repressor	MTIDLKRIKAERIAKGFTQDEMAEQLGWKTRTPYAKRENGLVGIGADELGRIAHVLGYSTNELGIFFTKNVPDEERKLQKV*	phrogs_hmm	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0053	cloud	direct	high	245	0.996	GCA_000620985.1_01083
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	23046	23735	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	23047	23736	GCA_000620985_1_4_54	GCA_000620985_1_4_54	+	142449	.	PDB:2FJR_A	Repressor-protein-CI	MRSNDEIITILTDLKNKKELSLSELARRVGMAKSALSRYFNKTREFPLNKVEDFARVLDSTSEYILGFEDEDITSIYSQLNEQRQTKVYNYASRQLEEQNSNVTSIDKNKKVYVLGKTAANPTEVSYGDAVYDETIDTNVPRNADCALVIQGDSMEPLLHDGSIVFYKQQCEVENGEVAIVDIDGNGVTCKKVYFNYDDNIVILKSLNSKYDDRELSPERVRIIGKVVL*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0054	cloud	direct	high	689	0.999	GCA_000620985.1_01084
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	23760	24350	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	23761	24351	GCA_000620985_1_4_55	GCA_000620985_1_4_55	+	142449	.	.	hypothetical protein	MLVVGVISVIIFIVSLVLFFVNYFRRKNVKVLLLIMLVSLVMIFVGIGIGAKDEVNNKASDNKKEVSKKEVKDDKMSEDQWKEYQKEFKELVKMSIDANDSISVLVSSYSVKKYSTSIAVDVKVSQDIKYVSKEQKQKAADGLGQVFYGAASGALATTIGTPDAMSLDIKMHYSDDDVLFTENRMIVNPKEFKVKN*	.	hypothetical_protein	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0055	cloud	direct	high	590	0.998	GCA_000620985.1_01085
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	24475	25581	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	24476	25582	GCA_000620985_1_4_56	GCA_000620985_1_4_56	+	142449	.	PDB:1Z19_B	Integrase	MASIQKLSKGNYRYRISYKKNGKYKTISKSGFSNQKLANIAAAEVEKKLFQGHDVNAGNNDIVESFQEWFEIYKKGKRTIENDKHYFYAIKFAKQYFSDTALKDLTKEMYQAALNDFGDSHHKETTRKRHTYFRSFIREMFEEGKIARDPTARIELTGRENENDTLKCLTEKETTILLQAVNRNLTLKYKSRYFIKFAIATGCRFSEILGLTWDCVDLKNKTVKINKTWNYLDNSGFKKTKNASSNRTITIDDNTVAWLAEMRQNRIVELSGNNLVFTDDGVKPITNNAVNKCLRNICIKENITVITCHGLRHTHATLLLYNDCNIKYVSKRLGHETIVTTLQTYSHVMDEMEQKEYTKVNEFMKKII*	common_virus_hmm	common_virus	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0056	cloud	direct	high	1106	0.999	GCA_000620985.1_01086
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	CDS	25909	26628	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	25910	26629	GCA_000620985_1_4_57	GCA_000620985_1_4_57	-	142449	.	TIGR02404	trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions]	MGNKNKFMDIYKDLARAIDGKVYRVGEPLPSENELAQKHNVSRETVRKALRRLSETGYIQKRQGKGSIVLDKTRFDFPVSGLTSFKELMDTNLSDNYTKIIRNEEMFLPAELADSMAMPHDFPVIRLTRVRYIDGEAVIIDDDYLSKKYVESIPDERAMISIYDYMENDLDLKIDFAHKQYTVEPVSKEDETLLDLHEDTHVVVVRSDVHLENTEFVEYTISRHRLDKFRFVDFARRQH*	mmseqs_cdd	nonviral_gene	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_CDS_0057	persistent	direct	high	719	0.999	GCA_000620985.1_01088
GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote	cenote	tRNA	252778	252851	GCA_000620985.1	KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985.1_KK211200.1	GCA_000620985.1|KK211200.1	GCA_000620985_1_1	GCA_000620985_1_1@C14	1435	1508	tRNA-Arg	tRNA-Arg	+	494728	.	tRNAscan-SE score: 72.4	Arg	NA	tRNAscan-SE	.	C14	29190.0	251344	280534	GCA_000620985.1|KK211200.1@region_251345_280534@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	tRNA	25716	25787	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	25717	25788	tRNA-Arg	tRNA-Arg	-	142449	.	tRNAscan-SE score: 56.3	Arg	NA	tRNAscan-SE	.	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote	cenote	tRNA	10072	10143	GCA_000620985.1	JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985.1_JHZM01000007.1	GCA_000620985.1|JHZM01000007.1	GCA_000620985_1_4	GCA_000620985_1_4@C0	10073	10144	tRNA-Trp	tRNA-Trp	-	142449	.	tRNAscan-SE score: 58.7	Trp	NA	tRNAscan-SE	.	C0	26629.0	0	26629	GCA_000620985.1|JHZM01000007.1@region_1_26629@tool_cenote_tRNA_0001	.	.	.	.	.	.