core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	200005	200193	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_200	189	-1	0.259	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	200	1	1	189	MDKVNCFLKALVLVIMLRCTMNYLLPSPDTITFKILDGLAFGVLTVFLINWIIGIFKKYSQK	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0001	cloud	direct	high	189	1.0	GCA_000649085.1_01031
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	200326	200898	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_201	573	-1	0.333	11	AGxAG	GENOMAD.168355.VP	4.393e-34	131	0	0	1	1246	Caudoviricetes	NA	NA	PF03592;COG3728;K07474	Phage terminase, small subunit	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	201	2	322	894	MPKLTPKQERFVNEYIRTLNVTQSAITAGYSPKTAHVTGCRLLKKKHINDYIQEQKKKVIDESVLSANELLHLLTNSAIGDETETKEVVVKRGEYKENPQNGKVQLVYNEYVQLVEVPIKPSDRLKARDMLGKYHKLFTERKEFTGDTPVIVNIGEWSEGDEEDTQRELDKIKENYPNRTMIVNNVPLED	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0002	shell	direct	high	573	1.0	GCA_000649085.1_01032
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	200961	201482	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_202	522	-1	0.291	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	202	3	957	1478	MKTLDQIEKYKTNIEDYRKEIKNLDAEVKNDGKQLDDINQEYQDLVINGEVEKADKLYTKIEKLESDYRAKSKRLMVMKQSFKKVVIKNCENMQDVADELSDEYNETYQDDLKRYETLNQQLKDAKDKLLGYNDEYSAKQRTLTQYIDRLKRENNIQPVEFIGNVNIIQPFNI	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0003	shell	direct	high	522	1.0	GCA_000649085.1_01033
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	201494	201727	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_203	234	-1	0.269	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	203	4	1490	1723	MKANQYEELSEVLDLTESQKLKLYVYQERQNKNIKQDSKESKQNNEEANREKRQKILDIKDDVTRQNAIAKNRELFK	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0004	shell	direct	high	234	1.0	GCA_000649085.1_01034
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	201741	202085	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_204	345	-1	0.316	11	GGAG/GAGG	GENOMAD.211836.VP	4.441e-18	81	0	0	0	1246	Caudoviricetes	NA	NA	K17472;TIGR00738	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	204	5	1737	2081	MQKLVEKEKTYNLPDEHRQVLNVIRNTSKKYITKTKILNQLGYEYNSSNERWLRKVINSLVYDYAYPIGCSYKRNERGYYIITTEQEKQQAMISIKKLADGSMKRYEALKRIEV	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0005	shell	direct	high	345	1.0	GCA_000649085.1_01035
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	202373	203014	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_205	642	-1	0.322	11	AGGAG	GENOMAD.223476.VP	1.113e-121	385	0	0	0	1246	Caudoviricetes	NA	NA	PF16560	Putative mobile pathogenicity island	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	205	6	2369	3010	MNVEIIANEFETRAATLLRYFTGLCESSYKLPFAFKIYNDPFNTVYLVSKGKMYAHVLIKDCEVRKTFEIASEKHTEKLIESIEGYYAGYDLHDGTHDTISDMMASFMFDNDYFMYGLETYAESNNSDVFEYLENGFDTDTLEGIQSTNTDVVANIEVLYQLATGINEPASELVEGLKLVTAFVQDENATLDDYKALERKLSELKSSYYSLSK	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0006	shell	direct	high	642	1.0	GCA_000649085.1_01036
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	203016	203297	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_206	282	-1	0.326	11	GGAG/GAGG	GENOMAD.149176.VV	8.96e-41	145	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	206	7	3012	3293	MNEKDEIYSRLDYDAPIQLIPAPENLFVEYIDDEEIWYSPIVCMALTKAHHINFYDSDDMGCIDKAPARYIKKFNPKTGEFEQFGKTKNEGDE	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0007	cloud	direct	high	282	1.0	GCA_000649085.1_01037
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	203299	203655	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_207	357	-1	0.303	11	GGAG/GAGG	GENOMAD.224407.VP	2.134e-19	85	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	207	8	3295	3651	MNNVKNKIIKYITENAGTSFVEIEKIFDEYHFEYKGNGAYTSSENNNIIFWYGWNEQAFNVVSSLVNEGLIEMNTCEPFIYIVDGKGLDLPIVKSKYINTDHWLPVAFNICKKEMECV	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0008	cloud	direct	high	357	1.0	GCA_000649085.1_01038
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	203903	205273	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_208	1371	-1	0.301	11	AGGAG	GENOMAD.141444.VV	1.613e-14	79	0	0	0	1246	Caudoviricetes	NA	NA	PF01057;PF02257;TIGR01613;COG5545	phage/plasmid primase, P4 family, C-terminal domain	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	208	9	3899	5269	MGIFPDYLEDKSIFDEKEFFDGNRFKFYEFALFLYEEFHGCYIDNRPHVFTGKKYEPLNIDVVRKMTIKYIPSLREQQNKEVYQKLKTLCMHNYQEQCSARYIGLKNGIYDTVEEKLKAFSHQYYITNIIDVDFNEQAQSDLIERFIKDISNDDEEVEQLIYEMIGYGLYRDNFLQVAFFYYSPGGNGKTTLLKLLHHFYNPENTTALSFNDLNDKFKPANLQGKLVNIADDIDPNRIKDTGNFKIIVTGNYITLEFKGQDAFEFKPYVKLIFASNELPMSNDKSEGFYRRMVIIPMLRKFGKGGQKKDPMLLNKLITPHNMSALLNLALKGLKRTLENNEIIEPKIARKTKEEYQFDNNPVLQFIEDATDKDYRQLPVVEGRNTDKAYEIYQIWCTNNGYHHLNKFNFSKELSKIGYKTVSYYSRVEEKSKRFYKKENTINIYDVDGSILKKLTE	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0009	cloud	direct	high	1371	1.0	GCA_000649085.1_01039
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	205285	206202	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_209	918	-1	0.325	11	None	GENOMAD.024962.VV	9.768e-19	90	0	0	0	1246	Caudoviricetes	NA	NA	PF08800;PF08708	VirE N-terminal domain; Primase C terminal 1 (PriCT-1)	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	209	10	5281	6198	MYYNIFALVLIHGGIKLSKIKLEHDTQISVVWYNNLDSRSFKNFSQPKWSELVNRLSIPQNNTNKYARGVAIYGDMKDGTDENGNEYKKYRKDENVIYRDVITLDYDDIPKLRPLHDAITDALKGVAWFWHTTFNHQTESSRIRLYIALNERISADEYRKYTKVLANKIGHPVDEGSFQPSRAMALPVYIKGKYPFIYKYNDAPILDTKTLNQLCDKYREKHKELTKFKYPKRRDNDFWKSIAFGVSTGNRNQTLTSLIGVLLNRRVPDPLVYAYCYMWNENCKPPLSSREFNATFESIYKREHQ	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0010	cloud	direct	moderate	870	0.948	GCA_000649085.1_01040
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	206248	206589	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_210	342	-1	0.325	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	210	11	6244	6585	MKKLKYQIHEIKDEVVSADLTSKLSALRNLVADEMERAEKYKKMLVASNDQVATYTANESIQNHFVCLAVINSIFTDVSSMIEQVEHHYNNAMEELKRASSDVNSLATKSDNA	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0011	cloud	direct	high	342	1.0	GCA_000649085.1_01041
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	206593	206859	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_211	267	-1	0.255	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	211	12	6589	6855	MTKLLQKRRNKDISIIKKMYPYLNNNEILEITNDYQEYKNLVQATETFTDFPIIYEDSNISKFLTKDDIEELKLAVEEMLVFVERLEE	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0012	cloud	direct	high	267	1.0	GCA_000649085.1_01042
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	206831	206950	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_212	120	-1	0.200	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	212	13	6827	6946	MKNLTKNDYKNIESKVSGDLIFKDKKHIKKNDETITKTS	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0013	cloud	direct	high	120	1.0	GCA_000649085.1_01043
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	206952	207164	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_213	213	-1	0.277	11	AGGAG	GENOMAD.100321.VV	1.763e-38	137	0	0	0	1	NA	NA	NA	PF20188;TIGR00180	ParB/RepB/Spo0J family partition protein	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	213	14	6948	7160	MNQEQIDVLEHVKYQLKTSIYNHFENYEHTEFKDGQEVVSQINREKHLEIIMKWAVQELEKNFNINEENE	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0014	cloud	direct	high	213	1.0	GCA_000649085.1_01044
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	207169	207324	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_214	156	-1	0.282	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	214	15	7165	7320	MKLYILISVLAITIGCLYAYSIDFIHGIAITALIQTLTLPIVDKHEYKKED	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0015	cloud	direct	high	156	1.0	GCA_000649085.1_01045
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	207340	207558	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_215	219	-1	0.279	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	215	16	7336	7554	MTNLAFPMLYITRKENGDTQKNVAIKLGISPQRYQLKESGKAIFNLNECQILSEMYDMPIDELFSSKIKVNF	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0016	cloud	direct	high	219	1.0	GCA_000649085.1_01046
GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	genomad	CDS	207665	208393	GCA_000649085.1	JIBS01000010.1	GCA_000649085.1|JIBS01000010.1	GCA_000649085.1_JIBS01000010.1	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393_216	729	1	0.237	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad	GCA_000649085.1|JIBS01000010.1	216	17	7661	8389	MFFTLLSSYVKNIFMQGDSIMIFNTLKILMNDYGITQTKISEETNITRPTLLSLIRNENKSIRYDVIESICKLFNIKMSDFLIFSKLDIRLGKIEMYSVEYHDTEDLVIENDVFINNKRYIFSHDIKNIKEPMQDHYEVILNAYLKSEEYYYFVENNLENTLTTLIKLKSDYEKIKDDIFLYLNNEIFNSRFEISFKYSISKDPHEFNDARHVIEKIKELDSFNKSMIFNYLQKELGDSHRT	GCA_000649085.1|JIBS01000010.1|provirus_200005_208393	GCA_000649085.1|JIBS01000010.1@region_200005_208393@tool_genomad_CDS_0017	cloud	direct	moderate	669	0.918	GCA_000649085.1_01047