core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	469096	471138	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	1	2043	GCA_000741965_1_1_442	GCA_000741965_1_1_442	+	2182033	.	PDB:2AR0_B	Type-I-restriction-enzyme	MHDATLAKVDADPLMRVDAQKRLDGIRTALDIADGKIGKAKAVIASADARIARADAAYNKASEAAKKAQSALLAAEEKAGREILADEADMRLRRLFYADSEAKRALRHAEADVMAESRAKTDAVQMLKQARADVKRLEKDEVEAQKALEGLALLNRRFAKLPDAAQKVYRKARDDYRAHFGQVRDAIAERLARSGQDAEIVRRLKERFDNELGGVYFPLARFGDYLVVVKDADGNNVNVSRAETLSETEKLRDALKADFGAGFKVSPVMKSRDYIQSRDAVGSGFMKELGEAVGMLDLDPAQQAQLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAYAQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFNQRQLQRVADEMRKRHEAVMNPNPSKLAQALTGFGFLWMMGMSPASAIVNLSQTAMVAYPVMAAKWGYADAARELLRASKQIGLRVGEKFNTIEDSLNEDEKAAFQKAVDYGVIDLSQAHDLAGVANGDPGLAGSAWQKVMDKASWLFHHAEKFNRQVTFVAAYRLAKQAGADSDTAFEQAKKATYDGHFDYAAQNRPRFMMGNVAKVVFLFKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHAMASGILGLPFVSTLLAVASMLGSDDDDPWIPSATCCTASPCPASKPI*	common_virus_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0001	cloud	direct	high	2042	1.0	GCA_000741965.1_00462
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	471135	472322	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	2040	3227	GCA_000741965_1_1_443	GCA_000741965_1_1_443	+	2182033	.	PDB:8HDS_J	Portal-Protein	MSAILGGSDDGDTSIILRAELYNRLRDNRGLMLLSKDEEEFFQFNTPLSGLDALLAQSQEQMAAPSHTPLVKLLGITPSGLNASTEGEIAVYYDHIRAMQENLLRDPLDKLLKLVQLHLFGKVDDNITFDFVPLRQMSETELSTIRKSDTDRDVAYIQAGVVSAEEVRGRLAGEPGSGYNGIDVEDVPEMPDDGFSDGMNDGAEEDVGGQAAPKPEPAQDAEWDESKHPRAENGRFGGGSGEKQTKKPSKGETDLGSLFQTAISNSGGNAVYSDFAVIDGKTAGIVKAETGIDISGWRHSIGEADIRHILKKHGNEKTENSRGQRAVTRQDIEKLPEILSDFDNMQYSGTNEFGNETFLVKKRIDDEIYCAQEVWTGRKKMVVKSMWVKKAKKKP*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0002	shell	direct	high	1188	1.0	GCA_000741965.1_00463
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	473082	473870	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	3987	4775	GCA_000741965_1_1_444	GCA_000741965_1_1_444	+	2182033	.	PFAM:PF04233.13	Minor-capsid-component	MKLSAPSDKDIVLKPIRPNLGVEAAYRKSLKKLLREMRTDVQGLLERHYPKGIAQDGLSDGLQAALSALLRYWLARLDKLAPQIAEIFANQSANHTERAFQTALREAGFTVRFRTAARQQTALQAVLGGNVSLIRSIGQQYLNRVEESVWRSVNAGYDMAQLTRELRKDYGISERRAAFIARDQTNKAKAAIEKARRQELGITEAIWMHSHAGKEPRPSHVAANGKRFDVDKGMYLDGKWVQPGEEINCRCTSRSVIKGFNS*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0003	shell	direct	high	789	1.0	GCA_000741965.1_00464
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	473867	476341	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	4772	7246	GCA_000741965_1_1_445	GCA_000741965_1_1_445	+	2182033	.	PFAM:PF09979.8	head-maturation-protease	MNTQQRAILSKASRLSAMDAEWDESKHPRAENGRFGSGRPSENGRLNLPENPTRGDLRRAAKQWLSENLQGKTVPTSDGKKVTFNRNDSTDHLSFNASRSKLHAQAVTFVADVFQTGRFIGREELAHERKDNFVAFHKYQKQVEIDGYRVLLEAAAGELPNGELEAADEMIAYNQRLAGKEKVGNAPASIETAKDSGQAAGFVSYADNHTPAQNQMQGCEFAAYAYKKIDSKSEKGSQNLHADDAANSIRKLEFGSTAFKVNPTPAADSAQEEKAVNSHSSTDIAADSTRIPDSLFTADINHTPAADSVQLFRILKITDPKGNDVSKTYDETIPEQENKYYTIEAIELNEKSPAAQWVDSTVQADGLDPTSIRSAGDILSLAKTVEQFQHTGRHIKRRSMCCPDLEGLHPSQINSDSTALKGGCPSGRGFSRKGNNMKTRDKNTLAQDRSLRSYDKDGRLHVESSNISKATVNPYYGGEIPNYRQLGLEPKKVYYLLRDPEELEKAAPTFNNLPLLNKHIPVSADEPQKEVIAGTTGSDTVFEDGYLKCSLAVWDAEAIAGIESGEQVELSSAYHYTADMTAGEFEGRHYDGVMRDIVGNHVALVDVGRAGRDVVVSDADPFNKKENTMKLKAGAKARIQAAVQPLLAQDAELSPDELLQVIGSLTNEVQTAQDDGKELPPENVENVGTDEDEPEDGENNTAPAEDEEPEAPEGGAPKPAQDAAISKMAMDAAIQKAVAAERKRAQALAAAQREVAHIVGDVAMDNAADVYKFALEQSGIDVTGVHPSAYRAMVGMLGKPKQPMAQDAAKTAQQFPGLSRIRKA*	phrogs_hmm	nonviral_gene	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0004	cloud	direct	high	2474	1.0	GCA_000741965.1_00465
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	476345	476824	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	7250	7729	GCA_000741965_1_1_446	GCA_000741965_1_1_446	+	2182033	.	PFAM:PF09956.8	minor-head-protein	MSFQKAVQPYQAPAVAGDFAAHNPNASMLAGEGALVSGTDGVTVGVFAWADADGKVSNKKTAGARIGFVHREQQASITAYLAEHGNQILPGQIITLAVAGDFWAHFPAGAEIGQNVFAKDADGTLKASADETETDHTLTRFKVASQAAAGELAKITTWE*	phrogs_hmm	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0005	shell	direct	high	479	0.998	GCA_000741965.1_00466
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	476832	477830	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	7737	8735	GCA_000741965_1_1_447	GCA_000741965_1_1_447	+	2182033	.	PDB:5WK1_D	Major-Capsid-Protein	MNTLQQLERDAGIVFMGGGKKLMNEQVQAALAMDAQPALTTAGNSGIPAWMLTYVDPKLIEVALQPMKAAEIFGEVKKGDWTTETAMFMLVEPTGEVSGYGDYNNNGVSGANVNFPQRQSYHYQVFTRWGEREVARAGEAKIDYVNRVNQASVNALNRFQNKSYLFGIKGLQNYGILNDPSLPAATAADQTWAAATGEQVYESIRKLFQKLLQQTGGLIDMNTPLLLVCSPTASVELTKTNQYNVNVTDQLKKNFPNLRIETVPEYSAASGEMVQLIVEELDGQRTLECGFTEKLRAHNMVLEASSIKQKKSQGTWGAIIYRPFCIASMTVS*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0006	shell	direct	high	998	0.999	GCA_000741965.1_00467
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	477894	478304	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	8799	9209	GCA_000741965_1_1_448	GCA_000741965_1_1_448	+	2182033	.	.	hypothetical protein	MKNKTFTDHDIRVTISGIIKEIWGDGVASNRPENITPEVAAVVSDAVNQIKTCSKRLLAVDITYNFLYTAPGTIWEVIEGMAADMIANLCYDDKRNPLTTYIGWIRVLRGRRQYVACVNTAALNYRSRLELAFLDL*	.	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0007	shell	direct	high	410	0.998	GCA_000741965.1_00468
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	478322	478564	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	9227	9469	GCA_000741965_1_1_449	GCA_000741965_1_1_449	+	2182033	.	.	hypothetical protein	MLDRLKHIWMLYRKPVLLYVVTVIIYILLDGPTTEGSRTPMPPMNAWEKFLFMAAGVSGFVCRLWIILIALSEHYRDKNW*	.	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0008	shell	direct	high	242	0.996	GCA_000741965.1_00469
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	478717	479007	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	9622	9912	GCA_000741965_1_1_450	GCA_000741965_1_1_450	+	2182033	.	.	hypothetical protein	MYRLFFRWIWEKVVPESIRNSKPVRWVANHRKLTIWVIVTVWINFFPATYEYDIVHYRKYSYWYVDDPWYPYARFLLPLILGAVFLFIPPDPPEKK*	.	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0009	shell	direct	high	290	0.997	GCA_000741965.1_00470
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	479064	479396	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	9969	10301	GCA_000741965_1_1_451	GCA_000741965_1_1_451	+	2182033	.	.	hypothetical protein	MAKQKTVTVGCKLPNGLIIEAGGKSVELNGANASNIIGGHGITYNVDADFFNAWMEAHQDRDMVKNGFVFAHENAKDTKAEAQEKTGNETKLEAIKPDDKANGVSTAKED*	.	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0010	shell	direct	high	332	0.997	GCA_000741965.1_00471
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	479399	479797	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	10304	10702	GCA_000741965_1_1_452	GCA_000741965_1_1_452	+	2182033	.	PFAM:PF13262.5	head-to-tail-adaptor	MPAVVFDKARFQTAYPEVRAAGAQLEMWFAQAESLLDNTGRSIVKKPEEREMLLFLLVRHFAALAERAAQGGLVGRIASASEGSVSVSADMGAAGGNAAWYLQTPYGATYWQLTAKYRRFRYVQGGCYARRR*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0011	shell	direct	high	398	0.997	GCA_000741965.1_00472
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	479781	480221	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	10686	11126	GCA_000741965_1_1_453	GCA_000741965_1_1_453	+	2182033	.	PFAM:PF05069.12	Virion-morphogenesis-family	MRGGDRFRRHLSELAAQAATGKVRVGIIEQANYEGSDGESVAQVAFWNEYGTATIPPRPFFRNTIARHKDEWPKQAAALMEANGGDVRQTLELMGEGVKGQIVETIQNFREPPNAAATVKKKGFDKPLIDTGTLWRSIDCEVADES*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0012	shell	direct	high	440	0.998	GCA_000741965.1_00473
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	480211	480591	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	11116	11496	GCA_000741965_1_1_454	GCA_000741965_1_1_454	+	2182033	.	PDB:5A21_F	head-closure-knob	MNLRAIANGAVTSVNPNLPAVLKLNDGYTTDASGKRKSGYSEHPVTVQTQTLSTQDLSLFEGLAQQGTLLYAYVTGQFRGLRRQSGKGADKLVFAAYGETETTEWLVKQVVESWPDWCKVLLWRQH*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0013	shell	direct	high	380	0.997	GCA_000741965.1_00474
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	480576	481055	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	11481	11960	GCA_000741965_1_1_455	GCA_000741965_1_1_455	+	2182033	.	PDB:5A21_G	tail-completion-protein	MAATLDDIYTEVRAMLLGLFSCEVVRGYGNNVPLPKPPFVVMNILNETDAATNEHAYAVADETAAVSRQSEIQMQLDFYGAEAGQMAQKTVLLWRDFYACERLKSCQPLYADPTRFMPLANEEGEYEERWTTTVHLAYAPQAEHPQQFVNAFDLTLTQP*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0014	shell	direct	high	479	0.998	GCA_000741965.1_00475
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	481067	482542	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	11972	13447	GCA_000741965_1_1_456	GCA_000741965_1_1_456	+	2182033	.	PFAM:PF11863.7	tail-sheath	MFQSIPASKIVSVNPAVLSSGGSPLSMNAVFLSKNDNLPTGRHTAFPDASAVGEFFGLASEEFKAAQVYFKGFDNSHIKPGTLYFYPYNVGKEAACLRGASVKSMSLAALKKLSGNLKVNIDGSDKSGDNINLSAATSFSDAADKIGTAINAAVQFDEQLQAFEIVSAIQGKSSEIGFAAGTLAEALNLTEAKGAIISKGSDGDSAETVMEGVIQSTLNFATFTTVFEPETADKLALAKWSNAQNNRFLYAAWGKEAAALQTGNTTCFGAQLKAAAYDGTAPIYGGLDKAAFLCGAIASIDFTETQGRITLAFKNQSGLSVDVDNAADADNLKENGYNYYGAWATANDRFTFLYPGQMPGKWKWIDAYVNQIRLNSQLQLALMTLLTSAKAVPYNAVGIALQRAACQDPINEALNFGSIQPGVPLGEQQRALINNEARADAAAKIESTGYFLLIQNASAQTRGNRQSMPMKLWYTDGGSVHNINLGSINVQ*	hallmark_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0015	shell	direct	high	1475	0.999	GCA_000741965.1_00476
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	482606	482914	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	13511	13819	GCA_000741965_1_1_457	GCA_000741965_1_1_457	+	2182033	.	.	hypothetical protein	MNYEALGRYTEACEKLQPLLREMKQHAGTVRAAAEQLPFVLDELAGGQPVPKLDPVAEMEKIDTAHRRLQELWQEACRWARTANTNAEQCGKAKLNFGREQA*	.	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0016	cloud	direct	high	308	0.997	GCA_000741965.1_00477
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	483229	484011	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	14134	14916	GCA_000741965_1_1_458	GCA_000741965_1_1_458	+	2182033	.	PFAM:PF04383.12	KilA-protein	MNAIAISNVAIRQTENNLYNLNDLHKASGGEKRHELTNWLKLQQTTELIDELSKPEISGLKENQQVIKVVRGGNKRGTYACKELVYAYATWISAKFFLQVIRTFDAVISGRLKPQAPRKALPSGLTHEQQAEVKALHNILLQSVPFEKQKALAITLWSAVKSKFKVGYKDVPPEQFPEVLSLMARVSVEKGAQYREAEAVNLETVPKLFANQANIPFNLNRNAHYAVTVKGGKIYRHLVSYITSPREDRMIPCLAHQNDF*	common_virus_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0017	cloud	direct	high	782	0.999	GCA_000741965.1_00479
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	484112	484552	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	15017	15457	GCA_000741965_1_1_459	GCA_000741965_1_1_459	+	2182033	.	PFAM:PF11681.7	virion-structural-protein	MQTVSDRTLTAANSILLMRVKGFNDNFVQIEGYAADNAFDFGQGKIGETLMGVDGQQSGGFTPYEVDFNIQLAPTSKSRDYFDQFTNDILQRQETRMVEFSVEISAVKKRYTATGFLVEVPGGTTAKKTLESATYSFRIVVKPEEI*	phrogs_hmm	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0018	shell	direct	high	440	0.998	GCA_000741965.1_00480
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	484460	485377	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	15365	16282	GCA_000741965_1_1_460	GCA_000741965_1_1_460	-	2182033	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRSEIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQITPKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVEAIEDIPAEKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISSNALYDLAVAVRYGAWAIQMGRDVSAPLFASAKRARIAQLSACAADISVIRNTRPLSRPCSIVICLVFNAISDFLRFHHDAEAVGCRFQRFLGGCAARDFH*	common_virus_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0019	cloud	direct	high	917	0.999	GCA_000741965.1_00481
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	485729	485911	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	16634	16816	GCA_000741965_1_1_461	GCA_000741965_1_1_461	+	2182033	.	PFAM:PF07927.11	toxin	MKYSEFKRWLEARGVEFKSQKRGSHYNLRLGDKTSVFPFHGSREMGSDLTNKIKKDLGLK*	phrogs_hmm	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0020	cloud	direct	high	182	0.995	GCA_000741965.1_00483
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	485968	486387	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	16873	17292	GCA_000741965_1_1_462	GCA_000741965_1_1_462	+	2182033	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MLNYPYILTPDSNGTFLVTFPDIPEAAAVGEDEETAAIEALDGLLCALDGYFDDRRPIPLPSMPKDGQYAVSLPALETAKVLLLNEMLAQGVRKAEMARRLDVHMPQIDRLLDLRHNTKIDFLEKAAAKLGKKLNIALS*	mmseqs_cdd	nonviral_gene	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0021	cloud	direct	high	419	0.998	GCA_000741965.1_00484
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	486760	486936	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	17665	17841	GCA_000741965_1_1_463	GCA_000741965_1_1_463	+	2182033	.	PFAM:PF16777.4	transcriptional-regulator	MALSRTEIQKRSDEKRGIVQKNFKLPSETVELIKTEAERRGVSQAALIALAVRSFAEA*	phrogs_hmm	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0022	shell	direct	high	176	0.994	GCA_000741965.1_00485
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	486940	487122	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	17845	18027	GCA_000741965_1_1_464	GCA_000741965_1_1_464	+	2182033	.	PFAM:PF16777.4	transcriptional-regulator	MAMAKAEIQKRSDEKRGVKLCSFKLKQETIAKLEQEAAKAGLSKTALLERPVGICRRLQI*	phrogs_hmm	hypothetical_protein	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0023	cloud	direct	high	182	0.995	GCA_000741965.1_00486
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	487243	487623	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	18148	18528	GCA_000741965_1_1_465	GCA_000741965_1_1_465	-	2182033	.	PFAM:PF02452.16	MazF-like-growth-inhibitor	MPLKFQPRERSVVMCDFRGYEEPEMVKKRPVVVIARNRHNGKLVTVVPLSSTEPVPLADYHHKMSENPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDRCIPIISEEDFQAIKTAVAKAFKLY*	phrogs_hmm	nonviral_gene	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0024	cloud	direct	high	380	0.997	GCA_000741965.1_00487
GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote	cenote	CDS	487767	488978	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C40	18672	19883	GCA_000741965_1_1_466	GCA_000741965_1_1_466	-	2182033	.	PDB:1Z19_B	Integrase	MPKIITPLTAAQVKNAKPKDRLYKLADGGGLALWVKPNGSKVWRFSFNGENGKPQTLTLGAYPLFSLVQAREWRDEQKRKLALGQNIKRVKVRTAYTLEKIAREWHGKWRKDMAEKYTVQVMRNFERYIFPVIGNRDIRQIKTIDVVECLRIMEQRGIADSLRKTKNSLNLVFSYAVGSGLIEYNPVLQIGKQVFEKPKNQHMAALPPSELPLLIDFLEQRNGFANPTNRLKITPTTRLAIYWLLLTMTRVQETALARWDEIDEKSGQWIIPAERKKERREHIVPLSTAMKLILQQARELNVNGVYLFESYNYRSHINREAPRMAMQRAGLKTTAHGLRSLARTYLREELNIDNDVAEKLLAHSLGTKTQTAYNRSELLKERGEALEKWGNVILTMMGNSQQE*	common_virus_hmm	common_virus	C40	19883	469096	488979	GCA_000741965.1|KN046803.1@region_469097_488979@tool_cenote_CDS_0025	shell	direct	high	1211	0.999	GCA_000741965.1_00488
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	900646	900825	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	1	180	GCA_000741965_1_1_800	GCA_000741965_1_1_800	-	2182033	.	PFAM:PF01798.17	transposase	MAALVAFKNNYFPAFTNRLKKAKKPKMLIIGALMRKILVVAFNLYKTETDFDKTRYQTA*	phrogs_hmm	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0001	cloud	direct	high	179	0.994	GCA_000741965.1_00831
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	901236	901610	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	591	965	GCA_000741965_1_1_801	GCA_000741965_1_1_801	-	2182033	.	PFAM:PF01548.16	Transposase	MRNAVGLDISAKTFDVVTIINGETDYRKFSNDEQGCKNLKEWISAKREKDIYVCMEATGNYYEQAADCLAEEYHVSVINPLKIKAYAQKRFSRVKNDKQDAKLIAEFCQTALIEELPKREKPTE*	common_virus_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0002	cloud	direct	high	374	0.997	GCA_000741965.1_00832
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	902289	902381	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	1644	1736	GCA_000741965_1_1_802	GCA_000741965_1_1_802	+	2182033	.	.	hypothetical protein	MRITVSLGKLHLTVSVDTRFILSVFMLFSQ*	.	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0003	cloud	direct	moderate	92	0.989	GCA_000741965.1_00833
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	902471	903526	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	1826	2881	GCA_000741965_1_1_803	GCA_000741965_1_1_803	-	2182033	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLITGNMGTGKTSKAVSMILNNEDGLFKMKLEDGTEVDRPLYFCHIDGLDAKKFNAHELTEEQIMSAPLRDIIPDGAVLIVDEAHYTYPVRSSGRAVPPYIQELTELRHHGHTVIMMTQHPQQLDIFVRNLISKHIHLERKALGTKQYSWYKCVTSLENPAAVSNTESKNFTPPKEAFKYYKSSSQHIKFKKKVPLAVWALILIIGFIGWKIYTVYGISQKAINPEQFETTSQVSASEPINKEADLNTAVQSQKINQDLKADDFIPTLAEKPESKPIYNNVRQVKTYERIAACIEGGKTGCTCYSDQATPLEEVTKEMCKQYARNGLPFNPYKEQDNSANNAQKAPTTS*	hallmark_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0004	cloud	direct	high	1055	0.999	GCA_000741965.1_00834
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	903529	903816	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	2884	3171	GCA_000741965_1_1_804	GCA_000741965_1_1_804	-	2182033	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPAALIPLIAFLLRMLIVKIIIATGLTFVSFAGYIAALNKFKEYFLNAANSMPEDIYNLLLIGGFGTGFNYLFGAFSFWVSMKALNKLTTVLPKG*	hallmark_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0005	cloud	direct	high	287	0.997	GCA_000741965.1_00835
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	903818	905344	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	3173	4699	GCA_000741965_1_1_805	GCA_000741965_1_1_805	-	2182033	.	PFAM:PF05616.12	attachment-protein	MILRYKHSILILNLMLFSVPSYAEIRKYPIGNSSVNLEINHSKSVVTDFRVDGQRFSGRIIEPAIIEHSPTGLRSASTLPATIESTVSRAGVLAGVGKLARLGAKFSTRAVPYVGTALLAHDIYETFKEDIQEQGYQYDPKTDKFVKGYEYSNCIWYRVGDYPHEKLVNDSCYGVDSSTMRLMSDYSRFPEVKELMEARMEILGRKYWEKLRNRPDMVSYKNYNFGPCEFGWNGGGCSVHKGDDYRGFINFSLSRDPKYKEEMDAKKLEEILSLKVDANPDRFIKATGFPGYKEDVKIENGKIVMLGPVTGEDGKPKQIKITFGQDAQGNTTASVEEIQRPDLTPGSAEAPEIKPNPAPTPETNPKQKENPREADQDNPKPTPTPGETPSPNESPKDRREEKKPDGNGGLLCDLFPTILACADMGEPSENDFEGIAIPKAVNEETWSPDNMFSSSGVCPKDKTFHVFGKAFNVSYQPLCILMENVRFAVILGFIIMSAFITFGSLRKE*	common_virus_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0006	cloud	direct	high	1526	0.999	GCA_000741965.1_00836
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	905283	905594	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	4638	4949	GCA_000741965_1_1_806	GCA_000741965_1_1_806	-	2182033	.	PF06575.12	Protein of unknown function (DUF1132)	MFITEAQLALYKYQDGTEYFNKTMAEIFSVELLKYSKKQHFYVVECISWFLNKKLSSNVWKIYFNDESVAIIKISDLNKLSNCRDIEIQTFNFDIKPDAIFSS*	hhsuite_tools	nonviral_gene	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0007	cloud	direct	high	311	0.997	GCA_000741965.1_00837
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	905723	905998	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	5078	5353	GCA_000741965_1_1_807	GCA_000741965_1_1_807	-	2182033	.	.	hypothetical protein	MYYQVGNQCLEQHQAENVYFSLVVPKITEDGKIIKPEYNGKDWKIDGQIIKADLPECDPSENLKDGMYIGWLIFGIAASVYFVTVIKRLLR*	.	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0008	cloud	direct	high	275	0.996	GCA_000741965.1_00838
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	906009	906227	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	5364	5582	GCA_000741965_1_1_808	GCA_000741965_1_1_808	-	2182033	.	PFAM:PF10389.8	major-head-protein	MKFMNNLKKYGAKIAAFAAAPFALAANTYAALPEPAKQALEGAKNDGLEAGWLVIGVFAALFVIAIVKRVMR*	phrogs_hmm	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0009	cloud	direct	high	218	0.995	GCA_000741965.1_00839
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	906311	906514	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	5666	5869	GCA_000741965_1_1_809	GCA_000741965_1_1_809	-	2182033	.	.	hypothetical protein	MSSYQQKFIVQELENYEFIFPNQLGDIGFTQNLKEAGQYENYEDAFNAGLEEIGGHFQIFSLYIREE*	.	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0010	cloud	direct	high	203	0.995	GCA_000741965.1_00840
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	906532	906843	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	5887	6198	GCA_000741965_1_1_810	GCA_000741965_1_1_810	-	2182033	.	PFAM:PF07459.10	RstB-protein	MFDQLQVINYPATLLGAKQFKGEIDGNKIDTCTVLVATPMPANGNSVGFTAASMKFGESHNFDRLKNLKFPCSVNVTVAMESTGKGLVPKLLDFEVKGAATKA*	common_virus_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0011	cloud	direct	high	311	0.997	GCA_000741965.1_00841
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	906864	908213	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	6219	7568	GCA_000741965_1_1_811	GCA_000741965_1_1_811	-	2182033	.	PFAM:PF02486.18	Replication-initiation-factor	MRAEERAETAGACVGAPCAPQTTHAVECPPRLIGGEQKNPNLQGGEQPIEILESHQVEFEYFSQYVTDGKGRLIEIPLRRGREDGAFIDQITFTIHEESIPKVTQKAYVTDAEYLAKYSELLQEILGFGISAKLPYKGKFFYKSCYQLGPQNVEYGKVHYGGQRETILVELNGTGCTAAKPGWENRLYEFLQKCVRPKITRVDVSHDFFNGEYTPQHALTDHDNGLFDCHNVRPKSECKGVAWRHEDGSGKSFYIGKRGNAKYTRIYEKGKQLGDKSSPWVRFETEFRNGDIEVPIDILIHAGSYLGGAYPVCEQIFKCEAKRMDSTVKEVNLTFEHKQFYARQQVGKWVNFLKDIGWTAEDIVKDLTNGVEGYPKGLQPEEYDSSKASVFYIHDEQKAINALNIEVLEFELNQEKQYEYPQDRHKQHERDYDKEQYQISDQLDYWKYL*	rep_hall_hmm	common_virus	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0012	cloud	direct	high	1349	0.999	GCA_000741965.1_00842
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	908210	908425	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	7565	7780	GCA_000741965_1_1_812	GCA_000741965_1_1_812	-	2182033	.	.	hypothetical protein	MCIAFYTVNPDQYEYQKSRAYIVRIFLNDEIVETTVFPITNPQNTYKTRQEAEEYGRLTVKALMDKQEKTA*	.	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0013	cloud	direct	high	215	0.995	GCA_000741965.1_00843
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	908628	909122	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	7983	8477	GCA_000741965_1_1_813	GCA_000741965_1_1_813	+	2182033	.	pfam07262	CDI immunity protein. CdiI immunity proteins function as part of the bacterial contact-dependent growth inhibition (CDI) system. CDI is mediated by the CdiB-CdiA two-partner secretion system. Each CdiA protein exhibits a distinct growth inhibition activity, which resides in the polymorphic C-terminal region (CdiA-CT). Cells with the CDI sytem also express a CdiI immunity protein that blocks the activity of cognate CdiA-CT, thereby protecting the cell from autoinhibition. In many CDI systems the cdiBAI genes are followed by orphan cdiA-CT/cdiI modules, suggesting that these modules are exchanged between the CDI systems of different bacteria.	MTFKQEQDYWAGYKANERALIIQTWSGFGRYAPDHLYPPHILPLDTDNETLGTTVLQALANSRTFVYDSPEDQDFFDTEKFRQRYEDWVAKLCGNLGYKTRRALFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLALSRCR*	mmseqs_cdd	nonviral_gene	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0014	persistent	direct	high	494	0.998	GCA_000741965.1_00844
GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote	cenote	CDS	909255	909635	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C80	8610	8990	GCA_000741965_1_1_814	GCA_000741965_1_1_814	-	2182033	.	5MY7_A	Adhesin	MNIRFFALTVPVLSLAACAVPEAYDGGGRGHMPPVQNQAGPADFRAFSCENGLSVRVRHLDGGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQKGGEAFFGFTDAYGNSVETSCRAR*	hhsuite_tools	hypothetical_protein	C80	8990	900646	909636	GCA_000741965.1|KN046803.1@region_900647_909636@tool_cenote_CDS_0015	persistent	direct	high	380	0.997	GCA_000741965.1_00845
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1383741	1383995	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	1	255	GCA_000741965_1_1_1225	GCA_000741965_1_1_1225	-	2182033	.	.	hypothetical protein	MTSSPHGPYDRGFTRHTMVGTEGSQAARRSQSHKTDRSPDCTLQLECMKSESLVIAGQHTAVNTFPGLVHTARHTMGVGDTRSR*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1385555	1385659	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	1815	1919	GCA_000741965_1_1_1226	GCA_000741965_1_1_1226	-	2182033	.	TIGR01621	pseudouridine synthase Rlu family protein, TIGR01621. This model represents a clade of sequences within the pseudouridine synthase superfamily (pfam00849). The superfamily includes E. coli proteins: RluA, RluB, RluC, RluD, and RsuA. The sequences modeled here are most closely related to RluA. Neisseria, among those species hitting this model, does not appear to have an RluA homolog. It is presumed that these sequences function as pseudouridine synthases, although perhaps with different specificity. [Protein synthesis, tRNA and rRNA base modification]	MKSPGSPILGDSLYGGTESETMFLYAWKIQFTYQ*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0002	shell	direct	high	104	0.99	GCA_000741965.1_01280
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1385761	1387224	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	2021	3484	GCA_000741965_1_1_1227	GCA_000741965_1_1_1227	+	2182033	.	pfam03895	YadA-like membrane anchor domain. This region represents the C-terminal 120 amino acids of a family of surface-exposed bacterial proteins. YadA, an adhesin from Yersinia, was the first member of this family to be characterized. UspA2 from Moraxella was second. The Eib immunoglobulin-binding proteins from E. coli were third, followed by the DsrA proteins of Haemophilus ducreyi and others. These proteins are homologous at their C-terminal and have predicted signal sequences, but they diverge elsewhere. The C-terminal 9 amino acids, consisting of alternating hydrophobic amino acids ending in F or W, comprise a targeting motif for the outer membrane of the Gram negative cell envelope. This region is important for oligomerization.	MYVGRTAIAASVLLMSAFSSYGAGSTLQEDNDKLSWGTGASASGAFSIALGRKSAASGTKGIAVGVSSKATALNAVAIGTESKAENKYAVALGANSAASGEKSYAVGHSSVASAPNSMAIGPSSVASAEGSVVIGNSGQVKLKADQGIAVGSEARVNAEHGIAIGKEAKAGGETTNPQFNGPAYYADTIAVGYQAEANKGGAIALGKQAKATKQKGMALGVESEAAGAFSTAVGNESKAKGQGSVGLGNQSKAEADFAVAVGNKAEATKENALAIGRYARANGNHSVSLGSYSEIKDGVSNSVALGYGSVASENNVVSVAYKETPQSTELSHRRIVGVDDGANDFDAVNVRQLKAMQGQNMADLFSVRSEVHGVAASSAALSALTPLSYDANNPTQFMVGFGTYKGRQAVALGLSHFVNDRFMVKVGGTLGGGNKTGHMMNVGLTWKFGTSQGVPATSDKVLMEQLIQDNRQLKARLEKLEARLNAM*	mmseqs_cdd	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0003	persistent	direct	high	1463	0.999	GCA_000741965.1_01281
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1387359	1387871	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	3619	4131	GCA_000741965_1_1_1228	GCA_000741965_1_1_1228	-	2182033	.	TIGR01510	pantetheine-phosphate adenylyltransferase, bacterial. This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]	MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINPDKRSTYTIAERRDMLHDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYEYERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETVKRYVPPAVYQKMIAEHHKNA*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0004	persistent	direct	high	512	0.998	GCA_000741965.1_01282
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1387995	1388678	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	4255	4938	GCA_000741965_1_1_1229	GCA_000741965_1_1_1229	-	2182033	.	cd10433	YccA-like proteins. A prokaryotic member of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAATMTAAVFLTMSALARRTQLDMNALGRFLTVGAVILMVAVIANLFLGIPALALTISAGFVLFSSLMVMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0005	persistent	direct	high	683	0.999	GCA_000741965.1_01283
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1388835	1389101	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	5095	5361	GCA_000741965_1_1_1230	GCA_000741965_1_1_1230	-	2182033	.	COG2924	Fe-S cluster biosynthesis and repair protein YggX  [Inorganic ion transport and metabolism, Posttranslational modification, protein turnover, chaperones]. 	MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTRHQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0006	persistent	direct	high	266	0.996	GCA_000741965.1_01284
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1389176	1389646	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	5436	5906	GCA_000741965_1_1_1231	GCA_000741965_1_1_1231	-	2182033	.	PRK00103	rRNA large subunit methyltransferase; Provisional	MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRGAGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFVIGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0007	persistent	direct	high	470	0.998	GCA_000741965.1_01285
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1389700	1390086	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	5960	6346	GCA_000741965_1_1_1232	GCA_000741965_1_1_1232	-	2182033	.	COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ribosomal structure and biogenesis]. 	MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWGGEKPSFHAGMQKPWHAAD*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0008	persistent	direct	high	386	0.997	GCA_000741965.1_01286
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1390187	1390423	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	6447	6683	GCA_000741965_1_1_1233	GCA_000741965_1_1_1233	-	2182033	.	.	hypothetical protein	MKMFEEFPNKWTYFMSIPKLSPKKTSAEYFTNLVEEYIYFVPMMYKSELIQYFSLKYSETKSEYLKDRYKKILIILRD*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0009	persistent	direct	high	236	0.996	GCA_000741965.1_01287
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1390543	1390758	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	6803	7018	GCA_000741965_1_1_1234	GCA_000741965_1_1_1234	+	2182033	.	.	hypothetical protein	MCIAFYTVNPDQDEYQKSRAFIVRIFVDDELTETKAFPITNPQNTYKTRQEAEEYGRLTVKALMDKQEKTA*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0010	cloud	direct	high	215	0.995	GCA_000741965.1_01288
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1390755	1392104	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	7015	8364	GCA_000741965_1_1_1235	GCA_000741965_1_1_1235	+	2182033	.	PFAM:PF02486.18	Replication-initiation-factor	MRAEERAETAGACVGAPCAPQTTHAVECPPRLIGGEQKNPNLQGGEQPIEILESHQVEFEYFSQYVTDGKGRLIEIPLRRGREDGAFIDQITFTIHEESIPKVTQKAYVTDAEYLAKYSELLQEILGFGISAKLPYKGKFFYKSCYQLGPQNVEYGKVHYGGQRETILVELNGTGCTAAKPGWENRLYEFLQKCVRPKITRVDVSHDFFNGEYTPQHALTDHDNGLFDCHNVRPKSECKGVAWRHEDGSGKSFYIGKRGNAKYTRIYEKGKQLGDKSSPWVRFETEFRNGDIEVPIDILIHAGSYLGGAYPVCEQIFKCEAKRMDSTVKEVNLTFEHKQFYARQQVGKWVNFLKDIGWTAEDIVKDLTNGVEGYPKGLQPEEYDSSKASVFYIHDEQKAINALNIEVLEFELNQEKQYEYPQDRHKQHERDYDKEQYQISDQLDYWKYL*	rep_hall_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0011	cloud	direct	high	1349	0.999	GCA_000741965.1_01289
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1392125	1392436	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	8385	8696	GCA_000741965_1_1_1236	GCA_000741965_1_1_1236	+	2182033	.	PFAM:PF07459.10	RstB-protein	MFDQLQVINYPATLLGAKQFKGEIDGNKIDTCTVLVATPMPANGNSVGFTAASMKFGESHNFDRLKNLKFPCSVNVTVAMESTGKGLVPKLLDFEVKGAATKA*	common_virus_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0012	cloud	direct	high	311	0.997	GCA_000741965.1_01290
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1392454	1392657	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	8714	8917	GCA_000741965_1_1_1237	GCA_000741965_1_1_1237	+	2182033	.	.	hypothetical protein	MSSYQQKFIVQELENYEFIFPNQLGDIGFTQNLKEAGQYENYEDAFNAGLEEIGGHFQIFSLYIREE*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0013	cloud	direct	high	203	0.995	GCA_000741965.1_01291
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1392741	1392959	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	9001	9219	GCA_000741965_1_1_1238	GCA_000741965_1_1_1238	+	2182033	.	PFAM:PF10389.8	major-head-protein	MKFMNNLKKYGAKIAAFAAAPFALAANTYAALPEPAKQALEGAKNDGLEAGWLVIGVFAALFVIAIVKRVMR*	phrogs_hmm	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0014	cloud	direct	high	218	0.995	GCA_000741965.1_01292
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1392970	1393245	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	9230	9505	GCA_000741965_1_1_1239	GCA_000741965_1_1_1239	+	2182033	.	.	hypothetical protein	MYYQVGNQCLEQHQAENVYFSLVVPKITEDGKIIKPEYNGKDWKIDGQIIKADLPECDPSENLKDGMYIGWLIFGIAASVYFVIVIKRLLR*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0015	cloud	direct	high	275	0.996	GCA_000741965.1_01293
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1393615	1394460	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	9875	10720	GCA_000741965_1_1_1240	GCA_000741965_1_1_1240	+	2182033	.	pfam05616	Neisseria meningitidis TspB protein. This family consists of several Neisseria meningitidis TspB virulence factor proteins.	MKKNTISNVHLIALIALAYFPINAFSSNENLKVVKIPNSSVNVIWDANKDVVDRFSRSSGGDFFGFRRIEPAIIEHTPTGLRSASTLPATIESTVSRAGVLAGVGKLARLGAKFSTRAVPYVGTALLAHDIYETFKEDIQEQGYQYDPKTDKFVKGYEYSNCIWYRVGDYPHEKLVNDSCYGVDSSTMRLMSDYSRFPEVKELMEARMEILGRKYWEKLRNRPDMVSYKITISDLVNSAGTAEVVQFIKEMIIEVLSIFHFQEIQNTKKKWMPKSWKRFYP*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0016	cloud	direct	high	845	0.999	GCA_000741965.1_01294
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1394424	1395164	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	10684	11424	GCA_000741965_1_1_1241	GCA_000741965_1_1_1241	+	2182033	.	PFAM:PF05616.12	attachment-protein	MDAKKLEEILSLKVDANPDRFIKATGFPGYKEDVKIENGKIVMLGPVTGEDGKPKQIKITFGQDAQGNTTASVEEIQRPDLTPGSAEAPEIKPNPAPTPETNPKQKENPREADQDNPKPTPTPGETPSPNESPKDRREEKKPDGNGGLLCDLFPTILACADMGEPSENDFEGIAIPKAVNEETWSPDNMFSSSGVCPKDKTFHVFGKAFNVSYQPLCILMENVRFAVILGFIIMSAFITFGSLRKE*	common_virus_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0017	cloud	direct	high	740	0.999	GCA_000741965.1_01295
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1395166	1395453	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	11426	11713	GCA_000741965_1_1_1242	GCA_000741965_1_1_1242	+	2182033	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPAALIPLIAFLLRMLIVKIIIATGLTFVSFAGYIVALNKFKEYFLNAANSMPEDIYNLLLIGGFGTGFNYLFGAFSFWVSMKALNKLTTVLPKG*	hallmark_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0018	cloud	direct	high	287	0.997	GCA_000741965.1_01296
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1395456	1396511	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	11716	12771	GCA_000741965_1_1_1243	GCA_000741965_1_1_1243	+	2182033	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLITGNMGTGKTSKAVSMILNNEDGLFKMKLEDGTEVDRPLYFCHIDGLDAKKFNAHELTEEQIMSAPLRDIIPDGAVLIVDEAHYTYPVRSSGRAVPPYIQELTELRHHGHTVIMMTQHPQQLDIFVRNLISKHIHLERKALGTKQYSWYKCVTSLENPAAVSNTESKNFTPPKEAFKYYKSSSQHIKFKKKVPLAVWALILIIGFIGWKIYTVYGISQKAINPEQFETTSQVSASEPINKEADLNTAVQSQKINQDLKADDFIPTLAEKPESKPIYNNVRQVKTYERIAACIEGGKTGCTCYSDQATPLEEVTKEMCKQYARNGLPFNPYKEQDNSANNAQKAPTTS*	hallmark_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0019	cloud	direct	high	1055	0.999	GCA_000741965.1_01297
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1396601	1396693	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	12861	12953	GCA_000741965_1_1_1244	GCA_000741965_1_1_1244	-	2182033	.	.	hypothetical protein	MRITVSLGKLHLTVSVDTRFILSVFMLFSQ*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0020	cloud	direct	moderate	92	0.989	GCA_000741965.1_01298
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1397372	1397746	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	13632	14006	GCA_000741965_1_1_1245	GCA_000741965_1_1_1245	+	2182033	.	PFAM:PF01548.16	Transposase	MRNAVGLDISAKTFDVVTIINGETDYRKFSNDEQGCKNLKEWISAKREKDIYVCMEATGNYYEQAADCLAEEYHVSVINPLKIKAYAQKRFSRVKNDKQDAKLIAEFCQTALIEELPKREKPTE*	common_virus_hmm	common_virus	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0021	cloud	direct	high	374	0.997	GCA_000741965.1_01299
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1398158	1398337	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	14418	14597	GCA_000741965_1_1_1246	GCA_000741965_1_1_1246	+	2182033	.	PFAM:PF01798.17	transposase	MAALVAFKNNYFPAFTNRLKKAKKPKMLIIGALMRKILVVAFNLYKTETDFDKTRYQTA*	phrogs_hmm	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0022	cloud	direct	high	180	1.0	GCA_000741965.1_01300
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1398338	1398811	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	14598	15071	GCA_000741965_1_1_1247	GCA_000741965_1_1_1247	-	2182033	.	.	hypothetical protein	MNSKTKLRVNKIIELKHHIENWETQTSEEIEKLLVDFEKQPRQEMSSYYTELFRDVQFAGVLVQIANKYAENSKINRCIVSALGMMMWRYKLPESEEIYRLMLANIQRKMFLYYSNKINCKFIILLFLLAIQFYIFSEYKNPSGFFTIRFCCFYQFG*	.	hypothetical_protein	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0023	cloud	direct	high	473	0.998	GCA_000741965.1_01301
GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote	cenote	CDS	1398833	1399444	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C108	15093	15704	GCA_000741965_1_1_1248	GCA_000741965_1_1_1248	-	2182033	.	COG1057	Nicotinic acid mononucleotide adenylyltransferase [Coenzyme transport and metabolism]. 	MMEKIGLFGGTFDPIHNGHLHIARAFADEIGLDTVVFLPAGGPYHKDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWWLMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGGSLKHAPHQLHAWLGNALQDGSVRILSAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHRLYEKL*	mmseqs_cdd	nonviral_gene	C108	15704	1383741	1399445	GCA_000741965.1|KN046803.1@region_1383742_1399445@tool_cenote_CDS_0024	persistent	direct	high	611	0.998	GCA_000741965.1_01302
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1436066	1437895	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	1	1830	GCA_000741965_1_1_1280	GCA_000741965_1_1_1280	+	2182033	.	PFAM:PF02486.18	Replication-initiation-factor	MEDRQGMKKAVAGVMTDALADGRKPATASNLPPLSNRGGTETETAGRVQEVFECYETYITDGKGKLLGVPLRRGVSDSAFIDQITFSIHEDTFFHVYGLSFDLFDDDDFIRAASDKMEEIFGFGIIEKAKHSGGRFYEGCWLMGTENAQYGRVHFGGQNNTMLFELTAVGCNAANIGWESRLFDFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGLFTCHHVKPKGECLGSDWEEEDEAKMTRGKTYGIGSRESSKYVRIYEKGKQLGDKTSIWTRFEIEFNSYWEKNRHNPDIVNFKNYNFSRCYFDWNGGSCTVGEDINDARSFISFSLRRNTKYKEEMDAKKLEEILALKVDANPDKYIQATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDAQGNNTVDVQVVPRPDLTPGSAEAPNVRPLPEVSPAENPANNPNPNEHPGTRPNPEPDPDLNPDANPDTDVQPGTSPDSPAVPGRTNGRDGKERKEGEDGGFLCKYFPKILACQEMGKPSDGMFDDIRIPQVTDDKTWSSDNFLPSNGVCPQPKTFHVFGRQYQASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLRGK*	rep_hall_hmm	common_virus	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0001	cloud	direct	high	1829	0.999	GCA_000741965.1_01338
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1437896	1438186	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	1831	2121	GCA_000741965_1_1_1281	GCA_000741965_1_1_1281	+	2182033	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLAGLIPLLGILLKMLIVRIIIATGMTFVTYAGYLIALNKFKDYTANAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHALKKLTFVFPR*	hallmark_hmm	common_virus	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0002	cloud	direct	high	290	0.997	GCA_000741965.1_01339
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1438196	1439308	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	2131	3243	GCA_000741965_1_1_1282	GCA_000741965_1_1_1282	+	2182033	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLYFCHIDGLDKRKFNAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQYSWYKCVTSLDNPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAVWALIAIIGFIGWKSYGMFQVYSKNTGGQIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLSEKPESKPIYNTVRQVKTFEQIAGCIEGGKSDCTCYSQQGTPLKEITKAMCKDYARNGLPFNPYKDEQQRTEQAAQSAKADKPQVLVMGGKPQVLVMGGKP*	hallmark_hmm	common_virus	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0003	cloud	direct	high	1112	0.999	GCA_000741965.1_01340
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1440170	1441132	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	4105	5067	GCA_000741965_1_1_1283	GCA_000741965_1_1_1283	+	2182033	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKLTFDAFAMVGNAEYSAKFDNNSKGLNQFSDWLKSLGCENLHICMEATGNYYEDVADYFAEYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAEYCRSAQESELVKRQKPTDEQYRLSRMTSAYTQIKSECAAMKNRYQVAKDEEAAKAYAEIIKAMNEQIEFLKAKIKEQTEKPKCKQGVRRLETIPGIGRMTAAVLFQYLTSLAFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEAKNKPKKVIIAALMRKLAVLAYHVHKKGEDYDPSRYKSA*	common_virus_hmm	common_virus	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0004	shell	direct	high	962	0.999	GCA_000741965.1_01342
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1441342	1442298	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	5277	6233	GCA_000741965_1_1_1284	GCA_000741965_1_1_1284	-	2182033	.	PFAM:PF01548.16	Transposase	MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTVEYLKKHNVALVVTESTGGLEIPAAKAIRRAGIAVIIANPRQTHQFAQSQPLTKTDAKDAKMPAFFAQMMMQKEGWQTMPYQPPTEAEEVLEALVNRRNQPVDMRTAEKNRLHQVHETQVGSVKQLIAHFDRLIGESDKQIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSHKRIAGLIGIAPHPRESGETKFKSRCFGGRSAVRKALYMAAVAAARFEPLIRDFYQRLLSEGKPYKVAVTACMRKLLTILNARIRDYFAENDTAENDIRTA*	common_virus_hmm	common_virus	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0005	shell	direct	high	956	0.999	GCA_000741965.1_01343
GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote	cenote	CDS	1442768	1443112	GCA_000741965.1	KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965.1_KN046803.1	GCA_000741965.1|KN046803.1	GCA_000741965_1_1	GCA_000741965_1_1@C114	6703	7047	GCA_000741965_1_1_1285	GCA_000741965_1_1_1285	+	2182033	.	cd20698	inhibitor (or immunity protein) of the contact-dependent growth inhibition (CDI) system of Klebsiella pneumoniae, and similar proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring cells. This model represents the inhibitor (CdiI, also called CdiI immunity protein) of the CdiA effector protein from Klebsiella pneumoniae, and similar proteins. CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered via its C-terminal domain (CdiA-CT). The CdiI immunity proteins are intracellular proteins that inactivate the toxin/effector protein to prevent auto-inhibition. They are specific for their cognate CdiA-CT and do not protect cells from the toxins of other CDI+ bacteria. Thus, CDI systems encode a complex network of toxin-immunity protein pairs that are deployed for intercellular competition. The K. pneumoniae CdiI binds its cognate CdiA-CT via one end of its beta-sandwich structure.	MYKNMLLNADELMWFFEKEPVISEDESCVIFKLNDGINNFEIAFGYALPYVSIKVFSSIGMICSYYLEQIIEMKIKNDEISEYLYVELKQNNDVSSFSIRIKPRIQINLQSLCS*	mmseqs_cdd	nonviral_gene	C114	7047	1436066	1443113	GCA_000741965.1|KN046803.1@region_1436067_1443113@tool_cenote_CDS_0006	shell	direct	high	344	0.997	GCA_000741965.1_01344