core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	861200	861550	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	1	351	GCA_001042695_1_1_689	GCA_001042695_1_1_689	+	1797862	.	.	hypothetical protein	MPVLVGREPFLVDSRADGRGGQADAGSRAFSADLFGRALLLGSGEPVEQPVGHVGAVHLRAAGTAFAHVGSGLSPYDAVLAERACAERHPCDRRIHDAVDLPGRVGDVPPWCCCRS*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	861489	863186	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	290	1987	GCA_001042695_1_1_690	GCA_001042695_1_1_690	+	1797862	.	PDB:2JES_G	Portal-Protein	MQLTFRAVSVTSRHGAAAGAEGAARAGEDRDRERDGPGVRQDARPDTGRHAASSARRGSAAAGQGRVERDHAAHRPIGRVRLEQDRQRHRHQSLGGRDRRHAGSVDDTAPAGTQATGDEVNHMADEGIFSSALKRPLDVTSFGATRITGVADDDMPTVRTLMKVWRQRYPRNLIRTGYYGAKEGFKDFGISIPDRIKANVSACIGWPAKAVRSLADLTVFDGWVYANGTDPYGLDELTDLNALELAIPQTVVSAYTHGCAFLTLTGDPDTGDLLVTPRSAEWSAAIWDGRRNRLAAALTINDATSKGRVTAFNVFLPGVVYQIVRDSYGSWAAERYETHWPEPTVVPLISDPQLSKPLGTSRVTRPVMALTDMGFRTLVRMEASAEFYAVPKLWFLGMDEDAFSADTWSSLVSAINAISKDEDGDNPTLQQISQASMQPHSDMLKTIALVVASDTDLPVDSLGITLDNPSSAEAMAAAERKLTRRADRQNRLFGMQLTRLARMAVCLSDGLAEPPDEVETGKARVGSHPRNQRWGARRRVREDQSGQPVVCDQRSRPAPARIGRQ*	hallmark_hmm	common_virus	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0002	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	863126	864592	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	1927	3393	GCA_001042695_1_1_691	GCA_001042695_1_1_691	-	1797862	.	.	hypothetical protein	MRRDFQPLGLWMISAFQMCAAVLPWAGDEEAGAGRVFSHGLDRHRIGVLLGELAVVAVLVHPHVGDVPVVAVCGVPVVTDRLHVVASQAQFGGLDDPLAVDAPRVFREVRRVPIVELLLHPHVPHRIHLVVGDLLERSTWGHGLQRTDLLTGHAFPLLAGFGKLVALSHLVGVHMAHEVRERVHVVRVVRPVETLAALGLAVGCDVREPGLEIVRYLAGLQYLARCFIDFEVFVGVVAFDAVASLAPFGDDLTLAVAAMKAGAKVGRVLGRVDVTTAREHDAERAWLPAVRHASIPRPVWIAACVAADGLAAGVPDLPVHEVVQVTQQLVGVRLLLRRIPQDAGLPADQLSDGLIVIGVLDLGGERIVEVFGVHAFVPVGGGRARRVGVLADDGRHEVEQNVTLSCRRQTGDFPPQFSEVKPREPDRLLLARSQLVQILGRHRHWRSLGSCPTCHVRGHATAAIAASESHCRPIRAGAGRLRWSHTTG*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0003	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	864922	865155	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	3723	3956	GCA_001042695_1_1_692	GCA_001042695_1_1_692	+	1797862	.	.	hypothetical protein	MTNKVTSYHQARQIVEQVNGGIPTAEEGHEDAEYYHVPMDSDFVMLDDCDWYVNKKTGKAERFYSSPVMPDVLGNRR*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0004	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	865190	866302	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	3991	5103	GCA_001042695_1_1_693	GCA_001042695_1_1_693	+	1797862	.	.	hypothetical protein	MDSYGNMMSMTGSWLVVGNYQATSVMTETLYDDFFKEQSINNHVYLICSASNVIIDKYESMGAGVRIWFHRFSLNGESINRDHLDIPRDLGFSQVSIIDDGLSVIADNLPMSGYEFLNNILKRIREFLLYAPNWESSHKIPKKKKKLIKKASEAFSRIICNYCVFDIQYIGQAFGSDDREVPRSATERLIEGHKTFTKILSVFQSRHKDKEVRILELDCEVQATSAMLSINSINGMDIGDKIKSNGMAFSKDYKSKVVTLEEAGLIRYFKPPFNKEFVDTFLSSTHVKKYAEFLKKSRFDHVGFNIDISQECMAIRRPEDDVIIDHISRSWNLDTKKMERTFGDAPIGQYPGDLFLGKILATNYSSTNLV*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_024105075.1_02159
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	866381	866854	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	5182	5655	GCA_001042695_1_1_694	GCA_001042695_1_1_694	+	1797862	.	PFAM:PF14265.5	head-scaffolding-protein	MAEDNDARNTGEQDSPPEGIDWKARYEAELERAKSWRGKAEANKNAADELAALKESQLTETQKLEARATRAEKKLNDLKTAQQRLTWRDEVARKTGVPVDLLRGETAEEINAHAQAIKTYMAAQVKPSAAKVADPAGTPDAAANPNVGLLKQLFGGK*	phrogs_hmm	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0006	cloud	indirect	.	.	.	GCA_020353915.1_00359
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	866884	867720	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	5685	6521	GCA_001042695_1_1_695	GCA_001042695_1_1_695	+	1797862	.	PDB:3GS9_A	tail-protein	MVLQTNQVTLPTSVSLAVVGKAHDTSTIATLSPADKLGFMDDKQQLLAETKAELKRRSTPTVSYEADVLTLAKAGMDTAGVALGDRVLLVDTTFTPDLRLAGRVLQLEEDLLDPALTVITIGNIIERFTASSHSAEQRLDRVIAGTATWQSTSQQVTQNASKWDQVAQTVVDNSDKWNTAAATLEQKSASWDNTSATLANKQPTWDTTAETVTAKSGMWDDAAVIAANHAQAIRQSTSGVTLHYENLAITLGDSISITDATGTWTFTDGAFVKQDTTE*	hallmark_hmm	common_virus	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0007	shell	indirect	.	.	.	GCA_000741405.1_00523
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	867731	868981	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	6532	7782	GCA_001042695_1_1_696	GCA_001042695_1_1_696	+	1797862	.	PFAM:PF08400.9	minor-tail-protein	MARYEIEKYRTIETTLDLANDYTPAIRLNAGDTDGRILKFNITDGGNDVDDLNGLPAKLTWNRDPTDPNSGGGFTDMTKTAGTDNATGVYKVSFTAPVPRALLQDADWHVIASRNIPVIIEPARINAKASEIADPLRDLHDTIDEAKQMIAEASIDIGTVSTLAPSKKATGALTGTGVKRKLNLGIPRGSKISSVTVTALDTATPTVSTGTDSNGDTTITLGLPRGKQGEKGEKGDPGDAGGLATADKAGIVRPGPDFSIYSDGVLYLKDNARSYSQMGLYASPFDVGTLIVYRGMGIFYDPIITLSPNPGYRSATSIEGPVEIQVLPDTFEFSPIDTRVVRFVTMMLVSSRGLTDGVSRVGVKATPVKGTGNVSLEFFDSLEAATPYTLYVDTGSSGPNVCSPSFTFRVEGAARK*	phrogs_hmm	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0008	persistent	indirect	.	.	.	GCA_000024445.1_01448
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	868978	869334	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	7779	8135	GCA_001042695_1_1_697	GCA_001042695_1_1_697	+	1797862	.	.	hypothetical protein	MNLSTTHPLILILCTVIGSCVVTSIVSWLLRRIDQRRNLEQAIAESATIRRLELEIYRQSLFLPTTSRMQHEHQLEAGKAYAERGGNGPGHVRCQQLEDDYRHRLDTDDWNYQPHTHN*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0009	persistent	indirect	.	.	.	GCA_000024445.1_01449
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	869468	869914	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	8269	8715	GCA_001042695_1_1_698	GCA_001042695_1_1_698	-	1797862	.	.	hypothetical protein	MAAHVGRDLVQVGGGRVDERTYVGPRVDVVDEGAHPVGVAPCGVLVALPIEHEDRSADVGAHGVDEVVGFGGHVAAAGVVVEAEALASLSHAVVLAGHVPVGEAGALRGLDHGEVVVGGAGDGRRLPAAHVDSMHVGHSAGRDGEHGE*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0010	shell	indirect	.	.	.	GCA_001053985.1_01015
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	869921	870184	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	8722	8985	GCA_001042695_1_1_699	GCA_001042695_1_1_699	-	1797862	.	.	hypothetical protein	MRSRAIVRCELRLRRRCRRGRDGGVAGVGVLVPLCGGTAEVVQIQWAGVSRDAAVAGVLAHGLAVAPIVPRSRLVPGRVVVGVLRDP*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0011	shell	indirect	.	.	.	GCA_001053985.1_01016
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	870477	870764	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	9278	9565	GCA_001042695_1_1_700	GCA_001042695_1_1_700	+	1797862	.	PFAM:PF06946.10	holin	MDISATTTLAAGIVALVAPALVQAFKKYIPADYVGLTSLGVSILLGVLAIAATNGFHGYGWGIVLTGVIGVAQAVYTLVNQAFSGKLSKDAKTNE*	phrogs_hmm	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0012	shell	indirect	.	.	.	GCA_000741405.1_00527
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	870975	871223	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	9776	10024	GCA_001042695_1_1_701	GCA_001042695_1_1_701	+	1797862	.	.	hypothetical protein	MNETFRLNVLLPSGEEIDTGGGLLELSGVLPPIGAGFYWRDKFYRVKDVFFNSDNSPDLGWWIALEDSSDDPRKAINSTYYR*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0013	shell	indirect	.	.	.	GCA_001053985.1_01018
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	871365	872021	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	10166	10822	GCA_001042695_1_1_702	GCA_001042695_1_1_702	+	1797862	.	COG1002	Type II restriction/modification system, DNA methylase subunit YeeA  [Defense mechanisms]. 	MAAQVKSKQRVGEHGEVFTNEREVNAMLDMVKQETERIDSRFLEPACGDGNFLSEVLRRKLAVVGERYGKSQLEYERYTFVAVSSIYGVDIMADNVEECRERLFGIVKDEYEQHFRNGCRPEVLDSIRYLLSKNILCGDALTLTDSEGEPIVFPEWSLVMGSKVKRRDFTFAALLNVSTQEPTFDMLDEIDEDEMGKVIPKPIREYPLTSFLEVAKYE*	mmseqs_cdd	nonviral_gene	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_024584435.1_01676
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	872014	873603	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	10815	12404	GCA_001042695_1_1_703	GCA_001042695_1_1_703	+	1797862	.	pfam07669	Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	MSSRLDLGNKSYNPDVLSCLANLSNDEVFTSPQLANKVLDLLPEEIWTDSSITFLDPFTKTGVFLREITKRLLIGLEPEFPDLQDRINHILNYQVWGIAITELTALLSRRTLYCSKKANSKYSIDSLFDNPDGHIHYKAIEHLWDGKNCVYCGASKQQYDRSSTLESYTYEFIHTFHPERILKNMQFDVIVGNPPYQLSDGGAGASAVPIYQKFVEQAKKMNPRFLSMIIPSRWFGGGRGLDLFRHDMLHDDQIRILHDFSDASQCFPGQEIKGGVCYFLWERDTHGDCKIYSHIGDDVIRSTRPLLEKGMETFIRDSRAIAILDKVKAMNESPMSASLNAGRYFGFHTRVKWDKDGRFGTLQTADGKGEYSISKIKDAGHPIKVYIAHGECWIAEKYVTRNTSDIRRYKVLIPRSGNPGSTIIGKPKISEPGSCSSNTYVVFFPASDSESAAVNAADYLRTKFVRYLISLRTSTQDMAPRAYEFVPTPDVSRHWSDAELFDKYGLTDEERKLIDESIPSMQMEDDGNA*	mmseqs_cdd	nonviral_gene	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_019704095.1_00117
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	873596	876118	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	12397	14919	GCA_001042695_1_1_704	GCA_001042695_1_1_704	+	1797862	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MPDNFFPQRLALTPTIYAYAIDDADHQGQLKVGYTDRDARTRILEQTKTAQVNFRIVLEESAMRDDGSAFDDHPVHKLLEQNFTRTGGEWFRCSVKDVRNAVEAVRERRDSMTQRTQSFGMRPEQRAAVEKTRAYFAQFEKDNPGKPPRFLWNAKMRFGKTFTSYEFAKAQGYKRVLVLTFKPAVENSWREDLESHKDFEGWQFISRETMLEEGGLDYEHADKTRPIVCFGSFQDYLGKNDMGGIKARNEWVHEVNWDLVIFDEYHFGAWRDSARELFEEEDKREQNDNMNSVAQIIDESFEQGDTDFLPITTGAYLFLSGTPFRAIANGEFIEEQIFNWTYSDEQRAKERWKPADGKNPYESLPRMVLMTYQMPDQIREIASGGEFDEFDLNEFFAAKGDGEDAEFKHPNEVQKWLDLLRGGFAETTVDMLKMGAKKPPMPYSDSRLKNILTHTFWFMPSVASCHAMANMLAQRQNVFYHDYTVNVCAGAGAGIGLEALGPVRASMADPLESKTITLSCGKLTTGVTVKPWTGILMLRNLKSPETYFQAAFRVQSPWTIDNPDGLHPNETAILKRECYVFDFAPTRALRQIADYSCSLHPDQSISPEQSVGEFIHFLPVLAYDGSSMKQVNATDVLDIASSGTSATLLAKRWESALLVNVDDLTLRNLMNNQRAMDALMSIEGFRSLNDDLEKIINKSEQIKEMKSKDEKPTKEEKKELRDAEKETKSLRKQVQEKLIKFATRIPIFMYLTDYREQTLKDVITKLEPELFKKVAGLTKGDFELLLSLNVFNPARMNDAVYKFKRYEDDSLSYAGIDKHEQDAQVGLFDTAIPAQEFEEM*	common_virus_hmm	common_virus	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0016	shell	indirect	.	.	.	GCA_001053985.1_01021
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	876123	876698	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	14924	15499	GCA_001042695_1_1_705	GCA_001042695_1_1_705	+	1797862	.	.	hypothetical protein	MGLIIADLNLLFSQSWWSGVSVLLGALLGACASVIVSLAQGHREKKRIRHEYYVNQNDKLIMDFAAFIRLCLAHNDAVREAIAAKSRYEDNKRMYDDRLVNQDVRIAFENREREADAMLLDLQESYSRLIMRFPELKDDAWALLTNLPDRSDESMEEWRKCLSAFRTNVTRLYARNEKKSLLTWFQKIKRG*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0017	shell	indirect	.	.	.	GCA_001053985.1_01022
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	876702	877871	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	15503	16672	GCA_001042695_1_1_706	GCA_001042695_1_1_706	+	1797862	.	1F8Y_A	NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE	MASSSTLSWMEKDPFIKLFNRGGYVLDFNDFRFDAFTQESVGVPLLTRYGLSKGKSLEKFANEAPRNVVMKLFSDLMDYYEYDFIQQDDNDADYQRLYKRCKKILSSTAVQGGSKEAGMFFNVIIRLDESQAMPSDRMFEGTDPRIAARFRNYDGSPNFDLLRTLPTIAVREFYQDESAVARLGYLGSDPAHQLSEIIETFPAAKLNDILPRSGWLGSRTRWMVFAGDPYRLIGNMQENYQAIQNPAVVQFPQVSIEDKQIAVMMPFNSSYMTPDDDPVYRAIKAAGEQLGYSCVRADEIHTPTDIKDDIFKLIEGSKIIIADLSGGNRNVYYEMGLAHARGRIVIPISSDSGTLPFDIGHIRTVLFHRSTHGMEGLTHDLVQSLKAIG*	hhsuite_tools	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0018	cloud	indirect	.	.	.	GCA_900637835.1_01972
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	877951	878577	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	16752	17378	GCA_001042695_1_1_707	GCA_001042695_1_1_707	+	1797862	.	.	hypothetical protein	MQPKQGSERFVLNKDSSSGMAIVHRIDCGAIRHQVEQDVREELPRQDFIEIGQDSTGVSLYRESTRWDTFRYEASYVTRDELAQTGLRYRPCKICNPDLPSRSQVKSISIHAVDLKSHHLGKFFFGWGILERFVITCQLDKDERPEVFIDAYFDKETSHRFQPDDVLEYPRQIRTKTNEEPVPQSSDHPAVGEACLNRVCGSDTIQTQ*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0019	shell	indirect	.	.	.	GCA_001053985.1_01024
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	878853	880280	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	17654	19081	GCA_001042695_1_1_708	GCA_001042695_1_1_708	+	1797862	.	3GUE_A	UTP-glucose-1-phosphate uridylyltransferase 2 (E.C.2.7.7.9)	MTEKSLEACIEKMRSFDMGESAIGQFTRLYQSWQTDESEWIRESDVEPLQGIKHIGDIHETINHRVASRALSKTAMLKLNGGLGTSMGLQGPKSLLPVRRHKARQMNFLDIILGQVTTVRQQQGVKLPLTFMNSYRTSKDSITRIRRNRNFHQDEIPLEILQNREPKIEMSTGLPVSYPSNPDLEWCPPGHGDVFTALWESGLLDILQAEGMEYLFISNSDNLGARPSSTVSGAFAQSGATFMVEVARKTDADRKGGQIVRNKKTGCLMLREMTQVHPDDKDQATDVKVHPYFNTNNIWVRISALKKMLKKRKGVLPLPVIRNMKTVNPTDSSTKSVIQLETAMGAAISLFEDAVCVEVSRSRFLPVKTTNDLLILRSDRFHLTDAFEMEDGNYIFPDVNLDTRFYKNIEDFDERFPYSVPSLAAANSLTIEGDWTFGKDVHCFADAHLSDMGRPSYVPNGSFVGSQGIEPDSWQ*	hhsuite_tools	nonviral_gene	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0020	persistent	indirect	.	.	.	GCA_000239695.1_00545
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	880427	882397	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	19228	21198	GCA_001042695_1_1_709	GCA_001042695_1_1_709	+	1797862	.	6SJ9_A	Proteasome accessory factor B/C (PafBC)	MAEGSTNGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKAAFAKQFQRDRAKLTAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRIMTQFKPEDMPLLAAANYLARSVSANEQENMLRAKESQHKSRSTPRLAQTPTPGLGLDSIAPGLGTQKIPEVLTNIVDSRRFAATVEFEGENINVAYTDSDDLASYMLDHPGSLIIEPIEAREAYKRRLNAAKAFEPADLTMTDAAIPASQVEVIPTTELLKDDDELPKKQPTVQTGTEVDRRLHLMLFLSAHLGEEYSLSELAERFIGHPKSPEEERRYINTIRKDIGTLTTVSDDGEVAGSQFFEIDWPLLEDEGIVSATNSLGLERLAGVSPQYMSMLTASVSYLAHSPLMPDIDRKQAIDLYNRLHNYSKPGQTPWLSLTGFELAPASFPVVKHAIEHDQLLDMEYTDGSGRTRRRLVAPAKVFVDEGVYYLAAWTDVSDKDRKEPPTNPVPQEENPEPPHKRRNSQSFHWQTLRLSRIGNVQAVEPSHHIAIPEVPLSELREWNFENGTEAVFITNQKGMPFIKNLPGATVDDYEDGQKVHLIISSDSWFVAFCIAHARHITSVGPETLRSMIVARADRELTHIEQQEEADAKRSEHRRRRR*	hhsuite_tools	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0021	persistent	indirect	.	.	.	GCA_000269605.1_00501
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	882397	882768	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	21198	21569	GCA_001042695_1_1_710	GCA_001042695_1_1_710	+	1797862	.	.	hypothetical protein	MPGWGWVILVLAAVIIFILGLVFALLHFKKAMTTVSGTASAISKRISAMQEDSRDLAQRDMTPSFTKPIGQTAQAYSRAHSDIIARRDRRRSRHHETWKAWAQTDQKHIDQLAEQLNITEDED*	.	hypothetical_protein	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0022	persistent	indirect	.	.	.	GCA_000260715.1_00823
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	882835	885513	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	21636	24314	GCA_001042695_1_1_711	GCA_001042695_1_1_711	+	1797862	.	PDB:2VA8_A	Helicase	MARHWRHKKAHKANNKANHQFESEKKEDRGEDDPVDMSIDRENLSPAQRYRAFQKSQEERKSLAGRFQESLPFELDKFQKRALRELEEGKNLLVAAPTGAGKTVIADFAIFLAQFHNVKAFYTTPIKALSNQKYHDLVKVYGSDRVGLLTGDMSINSQADIIVMTTEVLRNMLYEGSSSLRALKYVVLDEIHYLSDRMRGGVWEEVIIHLPASVKVVGLSATVSNVEDFADWIESVRGKTSLIVSENRPVPLLQEVMVQQSARKEPRLFDLYLDEGRKTINPALISFLDSMDKDALRRQRMDRNSRLFPSTSRRRGGTGRSGPGRHRSHQAEVSHYTPNRWALVDEMDFLGLLPAIYFIFSRNGCDRAVQQCMQAGLRLTTQDEAARICRIVDSMVYSQLDPDDARALGFASFRAALEQGIGAHHAGMITLYRQIVEHLFELGLLKVVFATETLALGINMPARSVVVEKLEKFNGISHEPLSPGEFTQLTGRAGRRGIDTVGYAVVADHRGFSPHTLVALASKRVYPLHSSFSPSFNMAVNLLNSADVETVRVTLDHSFAQWEAAESAQSLRTQIRATADKLNYYQQAFACDKGDFASFMRLRMELTQAERHDRKQLKHALFSSPKEKARAVKQLDQKIAALRHEERNHPCRFCPDLQAHLTWGQKWARLTAHMDRLQERYHSRTGSVSRKFDRICSILEVIGYVRKDPDRGYRVTAPGQLLRRIYSERDILVAQVLLSGITDRLNPEELACIASGFVYEPRSRADSSGLPRHFPGGSKGKIAQAVGHIMVAHTKIQALCEDYGLEPLPEPDFGMCQIIYDWVSDKPLTQVLDDTDMTGGDFVRNCKRTVDILTQISALSAYLPNPETAQTADKARALINKGIVSYSGIEDE*	common_virus_hmm	common_virus	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0023	persistent	indirect	.	.	.	GCA_938045375.1_00535
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	885582	885932	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	24383	24733	GCA_001042695_1_1_712	GCA_001042695_1_1_712	+	1797862	.	pfam13397	RNA polymerase-binding protein. RbpA is a family bacterial RNA polymerase-binding proteins. RbpA acts as a transcription factor by binding to the sigma subunit of RNA polymerase.	MAERSLRGMSIGAKSLESDDNVDFAARRDVTYVCPQGHKTILPLAADVDAPESWECRCGKIAHREDTEEQEESDDLAKPQRTHWDMLMERRTTQELAALLEKRLDMHKEGWIPDYE*	mmseqs_cdd	nonviral_gene	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0024	persistent	indirect	.	.	.	GCA_000148485.2_00986
GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote	cenote	CDS	886185	886865	GCA_001042695.1	AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695.1_AP012334.1	GCA_001042695.1|AP012334.1	GCA_001042695_1_1	GCA_001042695_1_1@C64	24986	25666	GCA_001042695_1_1_713	GCA_001042695_1_1_713	-	1797862	.	cd01105	Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.  A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	MAEPGGKTGPTKPQLSLHVKLKDRSDLSGKDAVQGELFALDGEEDFTKGYKGPAAAHVAGITYRQLDYWARKQIVVPSITQSHGSGSRRLYSFRDVVILAVSKRLLDAGVNLQNVNKAISFLMKHSSDQLERMTILCDGDQVLDCSDSTQIMDLMTKGQAVFGVSVTAIWHKVETDLQDQESVDLSHTKVKTGSSRVIDELAELRLRKKLDAQRAARQDVSRAESL*	mmseqs_cdd	nonviral_gene	C64	25666	861200	886866	GCA_001042695.1|AP012334.1@region_861201_886866@tool_cenote_CDS_0025	persistent	indirect	.	.	.	GCA_000413375.1_01696