core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	191661	192650	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	1	990	GCA_001047275_1_1_171	GCA_001047275_1_1_171	+	2173235	.	PDB:1Z19_B	Integrase	MATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIMDGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQDFADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRRPTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRRIAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQGLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0001	persistent	direct	high	989	0.999	GCA_001047275.1_00176
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	192992	193471	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	1332	1811	GCA_001047275_1_1_172	GCA_001047275_1_1_172	+	2173235	.	PF15956.5	Domain of unknown function (DUF4760)	MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK*	hhsuite_tools	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0002	persistent	direct	high	479	0.998	GCA_001047275.1_00177
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	193531	196575	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	1871	4915	GCA_001047275_1_1_173	GCA_001047275_1_1_173	-	2173235	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKGFKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGLATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTSASLESTANLYVSTSRALKDYGYTQQEILKFTEAANNAMTIGGVGARQQAAALFQLSQALGSGVLQGDEFKSISEAAPILLDTIAEYMGKSRDEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKMPVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVAAAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQIITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGHVMSVISSAIGAYVNVYINIFATGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAGISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGGGGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLTHQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEKLDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYQIAYDALQERIALAEQDPAYSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQQQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMIFGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMAAMMSAVMGLMGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTIREMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0003	persistent	direct	high	3044	1.0	GCA_001047275.1_00178
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	196605	196754	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	4945	5094	GCA_001047275_1_1_174	GCA_001047275_1_1_174	-	2173235	.	.	hypothetical protein	MNAEGFCEKQTACRPDGRRNAGDRADLKAFEFAGRELANYREMLKRYAV*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0004	persistent	direct	high	149	0.993	GCA_001047275.1_00179
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	197223	197567	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	5563	5907	GCA_001047275_1_1_175	GCA_001047275_1_1_175	-	2173235	.	PFAM:PF10828.7	Rz-like-spanin	MIGALLKNWKPLLILSAIAFFAVSWQLDRAAQYRRGYGAAVSEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG*	phrogs_hmm	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0005	persistent	direct	high	344	0.997	GCA_001047275.1_00181
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	197568	198107	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	5908	6447	GCA_001047275_1_1_176	GCA_001047275_1_1_176	-	2173235	.	PDB:1WTH_A	Tail-associated-lysozyme	MKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKAWWKETDTPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKPVPSSPAEGRYRLTAAAATAKQGAGEA*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0006	persistent	direct	high	539	0.998	GCA_001047275.1_00182
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	198314	198550	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	6654	6890	GCA_001047275_1_1_177	GCA_001047275_1_1_177	+	2173235	.	COG2336	Antitoxin component of the MazEF toxin-antitoxin module [Signal transduction mechanisms]. 	MLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRPVKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0007	persistent	direct	high	236	0.996	GCA_001047275.1_00183
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	198550	198897	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	6890	7237	GCA_001047275_1_1_178	GCA_001047275_1_1_178	+	2173235	.	PRK09812	type II toxin-antitoxin system ChpB family toxin. 	MYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVYACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVIEDVLARIGAVLFD*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0008	persistent	direct	high	347	0.997	GCA_001047275.1_00184
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	198952	199071	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	7292	7411	GCA_001047275_1_1_179	GCA_001047275_1_1_179	-	2173235	.	.	hypothetical protein	MLKLFAEYAVLRRMFYAVLGAAPLTALIWKPADILNALK*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0009	shell	direct	high	119	0.992	GCA_001047275.1_00185
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	199265	199597	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	7605	7937	GCA_001047275_1_1_180	GCA_001047275_1_1_180	-	2173235	.	.	hypothetical protein	MGFLQFGLLFAAAGGVLGAVWASLQERGRPVQAVLEAFISAIAAAAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKDGGSSDGKD*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0010	persistent	direct	high	332	0.997	GCA_001047275.1_00186
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	199598	200053	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	7938	8393	GCA_001047275_1_1_181	GCA_001047275_1_1_181	-	2173235	.	.	hypothetical protein	MNRRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFALAPDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFVWFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0011	persistent	direct	high	455	0.998	GCA_001047275.1_00187
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	200139	200444	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	8479	8784	GCA_001047275_1_1_182	GCA_001047275_1_1_182	-	2173235	.	.	hypothetical protein	MIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATLNGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0012	persistent	direct	high	305	0.997	GCA_001047275.1_00188
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	200556	204701	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	8896	13041	GCA_001047275_1_1_183	GCA_001047275_1_1_183	-	2173235	.	PFAM:PF13550.5	Putative-phage-tail-protein	MGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLIWYGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKFDSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHNFEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLSPAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDLTDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLRPKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGLGLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHVPVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTADLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRYTLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGIQDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGSRRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQLQALQGISIDSGLKQAFFTCQKPAEEDFAGIIVWVCENAACPAADANKAYDGAETFITIAKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRDKINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGFGLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVVDKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADLSAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVEGDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLAPREVRETENYTNYIWRGRTFGRYEDLPPRARGGGDYTQQSGSRYRTRLEYQIQVIPAGKPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQVYLGGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFVVVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVWQVG*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0013	persistent	direct	high	4145	1.0	GCA_001047275.1_00189
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	204803	205219	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	13143	13559	GCA_001047275_1_1_184	GCA_001047275_1_1_184	+	2173235	.	COG5606	Predicted DNA-binding protein, XRE-type HTH domain [General function prediction only]. 	MDCLRQFPENAKQAAGYQLQEKPENRGRRFGIGGKTLQQIDSGKEIMESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQKQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0014	persistent	direct	high	417	1.0	GCA_001047275.1_00190
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	205247	205678	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	13587	14018	GCA_001047275_1_1_185	GCA_001047275_1_1_185	-	2173235	.	TIGR02219	putative phage cell wall peptidase, NlpC/P60 family. Members of this family show sequence similarity to members of the NlpC/P60 family described by pfam00877 and by Anantharaman and Aravind (). The NlpC/P60 family includes a number of characterized bacterial cell wall hydrolases. Members of this related family are all found in prophage regions of bacterial genomes. [Mobile and extrachromosomal element functions, Prophage functions]	MPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVYGAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSHGGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0015	persistent	direct	high	431	0.998	GCA_001047275.1_00191
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	205680	206534	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	14020	14874	GCA_001047275_1_1_186	GCA_001047275_1_1_186	-	2173235	.	PFAM:PF05100.11	Minor-tail-protein	MKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVVWDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGARVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQAGCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNAGLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPFIPSADTVV*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0016	persistent	direct	high	854	0.999	GCA_001047275.1_00192
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	206531	207130	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	14871	15470	GCA_001047275_1_1_187	GCA_001047275_1_1_187	-	2173235	.	PFAM:PF09343.9	glycoside-hydrolase	MGNAVFPTFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQWRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGVARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPITWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL*	phrogs_hmm	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0017	persistent	direct	high	599	0.998	GCA_001047275.1_00193
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	207130	207396	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	15470	15736	GCA_001047275_1_1_188	GCA_001047275_1_1_188	-	2173235	.	.	hypothetical protein	MIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAASYMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0018	persistent	direct	high	266	0.996	GCA_001047275.1_00194
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	207408	207737	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	15748	16077	GCA_001047275_1_1_189	GCA_001047275_1_1_189	-	2173235	.	PFAM:PF12363.7	tail-protein	MTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADAGQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRKEQEAAQAGEARAAD*	phrogs_hmm	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0019	persistent	direct	high	329	0.997	GCA_001047275.1_00195
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	207798	208571	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	16138	16911	GCA_001047275_1_1_190	GCA_001047275_1_1_190	-	2173235	.	.	hypothetical protein	MQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAELKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTGKVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSESGVYAFNSSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVTSGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0020	persistent	direct	high	773	0.999	GCA_001047275.1_00196
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	208597	209025	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	16937	17365	GCA_001047275_1_1_191	GCA_001047275_1_1_191	-	2173235	.	.	hypothetical protein	MNREAVYSALWAKLDALDGFVTKSRKLVHWNDVKRYDQPALFMAQGDMQALTLTGRETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKTDLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0021	persistent	direct	high	428	0.998	GCA_001047275.1_00197
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	209022	209504	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	17362	17844	GCA_001047275_1_1_192	GCA_001047275_1_1_192	-	2173235	.	PFAM:PF05521.10	tail-completion-or-Neck1-protein	MLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQREVKQNRLSGRVLRVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASLRQVRQAFGKPLKPPRYVRVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK*	phrogs_hmm	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0022	persistent	direct	high	482	0.998	GCA_001047275.1_00198
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	209504	210034	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	17844	18374	GCA_001047275_1_1_193	GCA_001047275_1_1_193	-	2173235	.	CDD:cd08054	Head-Tail-Connector-Protein	MAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSLLAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLKNVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGMPPSAFAILNEYKRKGV*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0023	persistent	direct	high	530	0.998	GCA_001047275.1_00199
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	210037	210348	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	18377	18688	GCA_001047275_1_1_194	GCA_001047275_1_1_194	-	2173235	.	.	hypothetical protein	MTVKLKAPEGFTDVSFGSQSYAADENGIVEVPSEAAEFLYQFGFGNVASEPAEGPEKAKRGRKPKTGQPAGQSEPAEAAEPAEAEAAEPAEAEAEPAEAEKAE*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0024	persistent	direct	high	311	0.997	GCA_001047275.1_00200
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	210400	211899	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	18740	20239	GCA_001047275_1_1_195	GCA_001047275_1_1_195	-	2173235	.	PFAM:PF17236.1	Major-Capsid-protein	MNVNQLTQETIELMKSAQAGGGPPDKGFTQPAGFTAGLQTYDLSAPSQKLYPVLTPLRNRIPRVGGGRTIGSNWKAVTNINVGNQRAGIGEGRRGGVINHETVERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLKAGVTPTPTAVVSADAAGKISVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQVPAKITRRNADGTTDTFGGGSARKSAAASVSGIEAGKKVTAVIPAVRGAVAYAWYWGAAGSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAFWSDNKGGGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPLIKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGVGNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0025	persistent	direct	high	1499	0.999	GCA_001047275.1_00201
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	211940	213097	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	20280	21437	GCA_001047275_1_1_196	GCA_001047275_1_1_196	-	2173235	.	PFAM:PF04586.16	prohead-serine-protease	MTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKAAIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFSIGGRVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKPSDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVELSESEIAALKAVLAKADKPKGGPAAKSMYQVKSPADVLMSLKWLVEDASYDNIDEAVTAQIKESAAGLAESLKALAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKKQAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0026	persistent	direct	high	1157	0.999	GCA_001047275.1_00202
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	213165	215312	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	21505	23652	GCA_001047275_1_1_197	GCA_001047275_1_1_197	-	2173235	.	CDD:pfam04860	Portal-protein	MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQAEGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQKRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRKTLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRNNRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQEYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTPFVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNPKEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLGKSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVANGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERAAEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAGRLKESHAFGNARARTIARTETAMADGMGNLIGWEGTGLVAGKQWITAKDDKVSDVCNANGGMGVIGLHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0027	persistent	direct	high	2147	1.0	GCA_001047275.1_00203
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	215309	216730	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	23649	25070	GCA_001047275_1_1_198	GCA_001047275_1_1_198	-	2173235	.	PDB:8DGC_F	Large-Terminase	MALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHHAPICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAALAVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGRHREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEKDLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQRPAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYIIANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSAGPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRAFGELLDTRTGMIDFLRSQVEAVK*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0028	persistent	direct	high	1421	0.999	GCA_001047275.1_00204
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	216792	217241	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	25132	25581	GCA_001047275_1_1_199	GCA_001047275_1_1_199	-	2173235	.	PDB:4DZP_B	Small-Terminase	MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKWAASKIAPKKYGDKSELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0029	persistent	direct	high	449	0.998	GCA_001047275.1_00205
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	217534	218361	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	25874	26701	GCA_001047275_1_1_200	GCA_001047275_1_1_200	-	2173235	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MNNSVQISNISIHQTEIGLFSLNDLHRASGGEDRHAPRRWLQNIQTNDLIKELEKDGKPSIQSKQRLGTFVCRELVIAYGMWISPKFALQVIQTFLAVSDGIKSAKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVEAIEDIPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYGARAIQMGRDVSAPLKQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKIRPILPEIRNLSAV*	mmseqs_cdd	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0030	shell	direct	high	827	0.999	GCA_001047275.1_00206
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	218655	219815	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	26995	28155	GCA_001047275_1_1_201	GCA_001047275_1_1_201	-	2173235	.	PFAM:PF13588.5	endonuclease	MNAAAVSAVFKERIASHAEHVKKVAHICTTEETTKQALILPLLDILGFSAFDPNKVRAEYQADFPGAKSGERVDYALFCNGAPVMFIEAKSYTENLSNHCPQLSRYFNATPEIAICAITNGREWRFFTDLSNKNIMDSEPFLTVDVTMLNENDMAQLYQFRHDKFQPDALRSLAEESIYLTAFTESITESLKEVDLDFVRYVAGRANIQRQFTQRYLESIRHIVKQAVQNTVSSMVVSGLSAPKVQEEAAPVEKEQEDPTAPIIDPENNKIVTTYSERRLFDLVKSILPDDASIEAKDTESYFGVLVDGKSNRWILRYFDNKQRPSVIFPIELEESDISNIERCGLEVSGNQVIIDTPENLLRVAWLVIDSYRFCCDDENFKRKPK*	phrogs_hmm	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0031	persistent	direct	high	1160	0.999	GCA_001047275.1_00207
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	219906	220313	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	28246	28653	GCA_001047275_1_1_202	GCA_001047275_1_1_202	-	2173235	.	.	hypothetical protein	MNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPHKPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGEGPLHLQTDLGLAAWYRAIRQAAGNDFDLLFEKV*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0032	persistent	direct	high	407	0.998	GCA_001047275.1_00208
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	220580	220819	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	28920	29159	GCA_001047275_1_1_203	GCA_001047275_1_1_203	-	2173235	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MPSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0033	persistent	direct	high	239	0.996	GCA_001047275.1_00209
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	220951	221232	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	29291	29572	GCA_001047275_1_1_204	GCA_001047275_1_1_204	-	2173235	.	PFAM:PF05766.11	HNH-endonuclease	MAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA*	phrogs_hmm	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0034	persistent	direct	high	281	0.996	GCA_001047275.1_00210
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	221261	221410	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	29601	29750	GCA_001047275_1_1_205	GCA_001047275_1_1_205	-	2173235	.	.	hypothetical protein	MDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0035	persistent	direct	high	149	0.993	GCA_001047275.1_00211
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	221587	222081	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	29927	30421	GCA_001047275_1_1_206	GCA_001047275_1_1_206	-	2173235	.	PFAM:PF11753.7	nucelotide-kinase	MTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0036	persistent	direct	high	494	0.998	GCA_001047275.1_00212
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	222120	222404	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	30460	30744	GCA_001047275_1_1_207	GCA_001047275_1_1_207	-	2173235	.	.	hypothetical protein	MRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPRNAPNLSGKAGKTLGEYPSLPEI*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0037	persistent	direct	high	284	0.996	GCA_001047275.1_00213
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	222397	223176	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	30737	31516	GCA_001047275_1_1_208	GCA_001047275_1_1_208	-	2173235	.	PDB:4M4W_K	Replicative-helicase	MALKGASDFLRAFCSVQTERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRREAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA*	rep_hall_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0038	persistent	direct	high	779	0.999	GCA_001047275.1_00214
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	223188	224183	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	31528	32523	GCA_001047275_1_1_209	GCA_001047275_1_1_209	-	2173235	.	pfam13730	Helix-turn-helix domain. 	MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDFEPSDFEPSDFDAKNHQILSDEPSDFALRTIRFCAKNHQILSGEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF*	mmseqs_cdd	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0039	persistent	direct	high	995	0.999	GCA_001047275.1_00215
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	224180	224407	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	32520	32747	GCA_001047275_1_1_210	GCA_001047275_1_1_210	-	2173235	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0040	persistent	direct	high	227	0.996	GCA_001047275.1_00216
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	224581	224769	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	32921	33109	GCA_001047275_1_1_211	GCA_001047275_1_1_211	+	2173235	.	.	hypothetical protein	MPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDDEYLIGLLSK*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0041	persistent	direct	high	188	0.995	GCA_001047275.1_00217
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	224746	224901	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	33086	33241	GCA_001047275_1_1_212	GCA_001047275_1_1_212	-	2173235	.	.	hypothetical protein	MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYRIAPGLKDGFELLGKQPD*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0042	persistent	direct	high	155	0.994	GCA_001047275.1_00218
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	225324	226028	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	33664	34368	GCA_001047275_1_1_213	GCA_001047275_1_1_213	+	2173235	.	PDB:2FJR_A	Repressor-protein-CI	MTNRDLKAIRIDNLKRFFENKKLPVKDKSLLSQLMSGKASFGEKVSRRLEEEYGMGSLYLDSVPSEPTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETAPLDSLSVIGRVFWWSVLD*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0043	persistent	direct	high	704	0.999	GCA_001047275.1_00219
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	226188	226727	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	34528	35067	GCA_001047275_1_1_214	GCA_001047275_1_1_214	+	2173235	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MLNAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILNRPLFAENIEHWQHGPVVPCIYRTYKKYGGSPLPAAHIEPDKYADEELVVLNRVRKEQGCYTAWALRNKTHQEAPWIQTRQGEVIGIALMGEYFRHALPQTDYNFNLEKLKTAVEDSFVSVPHFNGADDLEKWLEQ*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0044	persistent	direct	high	539	0.998	GCA_001047275.1_00220
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	226728	227087	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	35068	35427	GCA_001047275_1_1_215	GCA_001047275_1_1_215	+	2173235	.	.	hypothetical protein	MQVLLGEDFKRALKNYPKEDRRKIAEFIAHVQQNGLSGLPGRNKSSDNVPADDPQWLEKVRFAQRHNLWHYHIGIPKYNGGRYGDLTSAYILHYTLCDGFIKIIGFDRHPPFILPDIPK*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0045	persistent	direct	high	359	0.997	GCA_001047275.1_00221
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	227104	227322	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	35444	35662	GCA_001047275_1_1_216	GCA_001047275_1_1_216	-	2173235	.	.	hypothetical protein	MANSNSGHSKKLRAATAAAATKAKLASGEYRQFSVQGRAEDVELILAAVEKAGGSRVQALAKICRRYLEGLS*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0046	persistent	direct	high	218	0.995	GCA_001047275.1_00222
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	227805	228005	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	36145	36345	GCA_001047275_1_1_217	GCA_001047275_1_1_217	+	2173235	.	.	hypothetical protein	MNELISRINRFGARAKDGQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0047	persistent	direct	high	200	0.995	GCA_001047275.1_00223
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	228038	228514	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	36378	36854	GCA_001047275_1_1_218	GCA_001047275_1_1_218	+	2173235	.	.	hypothetical protein	MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVDQS*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0048	persistent	direct	high	476	0.998	GCA_001047275.1_00224
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	228511	228786	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	36851	37126	GCA_001047275_1_1_219	GCA_001047275_1_1_219	+	2173235	.	.	hypothetical protein	MSYLDQPLKHGYGNGNGSGNGSGYGNGYGKGYGNGYGGVDGGGSGSGYGNGKGYGNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0049	persistent	direct	high	275	0.996	GCA_001047275.1_00225
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	228927	229259	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	37267	37599	GCA_001047275_1_1_220	GCA_001047275_1_1_220	+	2173235	.	.	hypothetical protein	MKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYTQEDWETYLTEDASRVGKDTEAAMNYAIDEREWFALAENIGRLANS*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0050	persistent	direct	high	332	0.997	GCA_001047275.1_00226
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	229412	229690	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	37752	38030	GCA_001047275_1_1_221	GCA_001047275_1_1_221	+	2173235	.	.	hypothetical protein	MKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0051	persistent	direct	high	278	0.996	GCA_001047275.1_00227
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	229687	229848	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	38027	38188	GCA_001047275_1_1_222	GCA_001047275_1_1_222	+	2173235	.	.	hypothetical protein	MSFHPETAYTGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0052	persistent	direct	high	161	0.994	GCA_001047275.1_00228
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	229917	230603	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	38257	38943	GCA_001047275_1_1_223	GCA_001047275_1_1_223	+	2173235	.	.	hypothetical protein	MSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKQPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGQTEHPQGNAAPAEDIEDDIPFN*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0053	persistent	direct	high	686	0.999	GCA_001047275.1_00229
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	230743	230925	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	39083	39265	GCA_001047275_1_1_224	GCA_001047275_1_1_224	+	2173235	.	.	hypothetical protein	MANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0054	persistent	direct	high	182	0.995	GCA_001047275.1_00230
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	230922	231413	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	39262	39753	GCA_001047275_1_1_225	GCA_001047275_1_1_225	+	2173235	.	PFAM:PF05565.10	resistance-protein	MTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0055	persistent	direct	high	491	0.998	GCA_001047275.1_00231
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	231465	231680	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	39805	40020	GCA_001047275_1_1_226	GCA_001047275_1_1_226	+	2173235	.	.	hypothetical protein	MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0056	persistent	direct	high	215	0.995	GCA_001047275.1_00232
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	231791	232774	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	40131	41114	GCA_001047275_1_1_227	GCA_001047275_1_1_227	+	2173235	.	.	hypothetical protein	MQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLSLQDMRYACNQELINFAEHIVKQVQRLGLYCNTDDPANEESVLFACREASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLAVRVAKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQADKELSAMYGKPLNPVRPRRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGAGFSCFNWTEHFKRTANLISLMHREAAA*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0057	persistent	direct	high	983	0.999	GCA_001047275.1_00233
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	232972	233184	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	41312	41524	GCA_001047275_1_1_228	GCA_001047275_1_1_228	+	2173235	.	.	hypothetical protein	MTFQGHNNRKKAGGYAEYITGGELRLLQQTACRFKAALETAAWKHYVRAIKESEPVPDAEARRKRKKQAA*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0058	cloud	direct	high	213	1.0	GCA_001047275.1_00234
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	233210	233404	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	41550	41744	GCA_001047275_1_1_229	GCA_001047275_1_1_229	+	2173235	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MDSEYLDPQQCADILSVKKRTFLERYAPRPDFPARISVSKKRFWWKKEEVEGWLDRQKEKRPVM*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0059	persistent	direct	high	194	0.995	GCA_001047275.1_00235
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	233695	234369	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	42035	42709	GCA_001047275_1_1_230	GCA_001047275_1_1_230	+	2173235	.	.	hypothetical protein	MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGMASIDRSVLWCNDEGWKLADYLPCDDVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENAALRLVCLSQQGEGLENIWEQDGNITDVSLACRSAQSGWMNVASDVRRWLNLGELSGERNHASAAQISIPVCTESGGVLGVVHVEFECAECADTAAQAEWVALALALSEPLKQLLGITAAEGDENV*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0060	persistent	direct	high	674	0.999	GCA_001047275.1_00237
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	234362	234955	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	42702	43295	GCA_001047275_1_1_231	GCA_001047275_1_1_231	+	2173235	.	PRK00393	GTP cyclohydrolase II RibA. 	MSELLDHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNCSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLRQEGRGIGLINKIRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPLHVGENLENERYLQTKADKLGHLMSE*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0061	persistent	direct	high	593	0.998	GCA_001047275.1_00238
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	235308	236270	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	43648	44610	GCA_001047275_1_1_232	GCA_001047275_1_1_232	+	2173235	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKLTFDATAIVGNAEYSAKFDNDSKGLNQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLSRMIAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0062	persistent	direct	high	962	0.999	GCA_001047275.1_00240
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	236905	237264	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	45245	45604	GCA_001047275_1_1_233	GCA_001047275_1_1_233	-	2173235	.	.	hypothetical protein	MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRLARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0063	persistent	direct	high	359	0.997	GCA_001047275.1_00241
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	237385	238470	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	45725	46810	GCA_001047275_1_1_234	GCA_001047275_1_1_234	-	2173235	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKS*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0064	persistent	direct	high	1085	0.999	GCA_001047275.1_00242
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	238480	238770	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	46820	47110	GCA_001047275_1_1_235	GCA_001047275_1_1_235	-	2173235	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTSNAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0065	persistent	direct	high	290	0.997	GCA_001047275.1_00243
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	238771	240291	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	47111	48631	GCA_001047275_1_1_236	GCA_001047275_1_1_236	-	2173235	.	PFAM:PF05616.12	attachment-protein	MMYSFEANANAVKISETLSVDTGQGAKIHKFVPKNSKTYSSDLIKTVDLTHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYQTFKEDIKARGCRYDPETDKFVKGYEYSNCIWDFVENGIKTYGCYGVDSSIMRLEKDYERFPEVKQLMESQMERIARPFWDKRKEEIPKDTALKLHLSTFSHCEFFWNGGGCFVRNGDNLIHRVYFKLERNPKYKEEMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKEGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0066	persistent	direct	high	1520	0.999	GCA_001047275.1_00244
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	240275	240592	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	48615	48932	GCA_001047275_1_1_237	GCA_001047275_1_1_237	-	2173235	.	PF06575.12	Protein of unknown function (DUF1132)	MNKPFITQAQLALYKYQPSSEYFGQSMAVIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFPDNSEMVIKESLKDGHKTYKFEFCQIVDNCNFDDVFV*	hhsuite_tools	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0067	cloud	direct	high	317	0.997	GCA_001047275.1_00245
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	241005	241223	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	49345	49563	GCA_001047275_1_1_238	GCA_001047275_1_1_238	-	2173235	.	CDD:pfam10389	filamentous-major-capsid-protein-B	MKFINTCRKYGAKLAVVTAAPLALAAQANAALPETAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK*	hallmark_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0068	persistent	direct	high	218	0.995	GCA_001047275.1_00247
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	241297	241494	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	49637	49834	GCA_001047275_1_1_239	GCA_001047275_1_1_239	-	2173235	.	.	hypothetical protein	MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAVNAGLEEIGNQCEFVVFGFLKD*	.	hypothetical_protein	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0069	persistent	direct	high	197	0.995	GCA_001047275.1_00248
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	241499	241789	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	49839	50129	GCA_001047275_1_1_240	GCA_001047275_1_1_240	-	2173235	.	PFAM:PF07459.10	RstB-protein	MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALGSSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVTGFQFVKKG*	common_virus_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0070	persistent	direct	high	290	0.997	GCA_001047275.1_00249
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	241834	243183	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	50174	51523	GCA_001047275_1_1_241	GCA_001047275_1_1_241	-	2173235	.	PFAM:PF02486.18	Replication-initiation-factor	MEDKQGMTKEVAGVMTEAPADGRKPATASNLPPPPYLTGGGTETETAGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQITFSIHEDTFFHVYGLSFDLFDDDDFIRAASAKMEEIFGFGIIEKAKHSGGRFYEGCWLMGTENAQYGRVHYGGQRETMLVELTAVGCNAANIGWESRLFDFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGLFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVVSADRCLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLALEAYDCAFLKSQVIHEQPAFKPYNDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA*	rep_hall_hmm	common_virus	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0071	persistent	direct	high	1349	0.999	GCA_001047275.1_00250
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	CDS	243855	244259	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	52195	52599	GCA_001047275_1_1_242	GCA_001047275_1_1_242	+	2173235	.	COG0537	Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase [Nucleotide transport and metabolism, Carbohydrate transport and metabolism, General function prediction only]. 	MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWHGHIAEITDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFENDATFPAPIWANPVRKHGMTLPQNWTEQLKKLL*	mmseqs_cdd	nonviral_gene	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_CDS_0072	persistent	direct	high	404	0.998	GCA_001047275.1_00251
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	605954	607000	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	1	1047	GCA_001047275_1_1_581	GCA_001047275_1_1_581	-	2173235	.	PRK11815	tRNA dihydrouridine(20/20a) synthase DusA. 	MFELKECENLMINKELIEHKGKRRLCVAPMLDWTDRHYRYLARQITRNAWLYSEMVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQKGAFGACLMNEVGLVADCLNAMHDAVGIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPELEIIINGGITTNEAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDNRAPIEYADLVQRLYTYSQVQIQAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGGLIFEAWKEVERANTRE*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0001	persistent	direct	high	1046	0.999	GCA_001047275.1_00608
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	607090	608244	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	1137	2291	GCA_001047275_1_1_582	GCA_001047275_1_1_582	+	2173235	.	PDB:1Z19_B	Integrase	MATITKRRNPSGETVYRVQVRVGKKGYPAFNESRTFSKKALAVEWGKKREAEIEAGPELLFKRGKVKMMTLSEAMRKYLNETLGAGRSKKMGLRFLMEFPIGGIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEIGWQELDFAANGLKRSNMVAKSAIRDRLPTTEELQTLTTYFLRQWQSRKSSIPMHLIMWLAIYTSRRQDEICRLLFDDWHKNDCTRPVRDLKNPNGSTGNNKEFDILPMALPVIDELPEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLRIKDLRFHDLRHEAATRMAEDGFTIPQMQRVTLHDGWNSLQRYVSVRKRSTRLDFKEAMMQAQSDIKSGK*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0002	persistent	direct	high	1154	0.999	GCA_001047275.1_00609
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	608294	608560	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	2341	2607	GCA_001047275_1_1_583	GCA_001047275_1_1_583	-	2173235	.	pfam11112	Pyocin activator protein PrtN. PrtN is a transcriptional activator for pyocin synthesis genes. It activates the expression of various pyocin genes by interaction with the DNA sequences conserved in the 5' noncoding regions of the pyocin genes.	MNISKEQGLLIAYGGRPYIPPREVHKDFFAHIGFNAFKASGVRCELPFPIFRLSDSRKSEYFVSVRELAKAIADKEEKAKSEYRKFRS*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0003	persistent	direct	high	266	0.996	GCA_001047275.1_00610
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	608668	609816	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	2715	3863	GCA_001047275_1_1_584	GCA_001047275_1_1_584	-	2173235	.	PFAM:PF02384.15	DNA-methyltransferase	MRTHIRTCVYHDSGTKGSNTASGISGTAAGAAEQAFFSAAKTANRSASAASANAPPHPDKPENGRKPMTFQGHNNRKKAGGYAEYITGGSLRRLVAAKVRRYCGEHPGVFDGAAGSGQLEQYIEPSDFRAVEIQAEACKALLQNYPAAKVYNTSLFLYTDGEPQDCTVMNPPFSIKLKDLSEDEKSRIAQEYPWKKSGVADEIFVLKGLENARRFGFFILFPGIAYRKSEQRFREIIGNRLAELNRIQNAFEDTPIEVLLLVIDKDKTDGGCIRELYDCKTDTLLAADTWQIEPDLWQTVQEPAPPKEKEDPVLLEHECRDAAAKRIARELRFSKMVNEIEGWPHAEFDGFCDRLCNLIQAEKYGKKHYFPCSLPLFGGAAG*	phrogs_hmm	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0004	persistent	direct	high	1148	0.999	GCA_001047275.1_00611
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	609813	610796	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	3860	4843	GCA_001047275_1_1_585	GCA_001047275_1_1_585	-	2173235	.	.	hypothetical protein	MQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLSLQDMRYACNQELINFAEHIVKQVQRLGLYCNTDDPANEESVLFACREASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLAVRVAKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQADKELSAMYGKPLNPVRPRRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGAGFSCFNWTEHFKRTANLISLMHREAAA*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0005	persistent	direct	high	983	0.999	GCA_001047275.1_00612
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	610907	611122	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	4954	5169	GCA_001047275_1_1_586	GCA_001047275_1_1_586	-	2173235	.	.	hypothetical protein	MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0006	persistent	direct	high	215	0.995	GCA_001047275.1_00613
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	611174	611665	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	5221	5712	GCA_001047275_1_1_587	GCA_001047275_1_1_587	-	2173235	.	PFAM:PF05565.10	resistance-protein	MTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0007	persistent	direct	high	491	0.998	GCA_001047275.1_00614
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	611662	611844	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	5709	5891	GCA_001047275_1_1_588	GCA_001047275_1_1_588	-	2173235	.	.	hypothetical protein	MANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0008	persistent	direct	high	182	0.995	GCA_001047275.1_00615
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	611984	612670	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	6031	6717	GCA_001047275_1_1_589	GCA_001047275_1_1_589	-	2173235	.	.	hypothetical protein	MSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRPEHPQGNAAPAEDIEDDIPFN*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0009	persistent	direct	high	686	0.999	GCA_001047275.1_00616
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	612739	612900	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	6786	6947	GCA_001047275_1_1_590	GCA_001047275_1_1_590	-	2173235	.	.	hypothetical protein	MSFHPETAYTGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0010	persistent	direct	high	161	0.994	GCA_001047275.1_00617
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	612897	613175	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	6944	7222	GCA_001047275_1_1_591	GCA_001047275_1_1_591	-	2173235	.	.	hypothetical protein	MKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0011	persistent	direct	high	278	0.996	GCA_001047275.1_00618
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	613328	613660	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	7375	7707	GCA_001047275_1_1_592	GCA_001047275_1_1_592	-	2173235	.	.	hypothetical protein	MKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYTQEDWETYLTEDASRVGKDTEAAMNYAIDEREWFALAENIGRLANS*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0012	persistent	direct	high	332	0.997	GCA_001047275.1_00619
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	613801	614076	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	7848	8123	GCA_001047275_1_1_593	GCA_001047275_1_1_593	-	2173235	.	.	hypothetical protein	MSYLDQPLKHGYGNGNGSGNGSGYGNGYGKGYGNGYGGVDGGGSGSGYGNGKGYGNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0013	persistent	direct	high	275	0.996	GCA_001047275.1_00620
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	614073	614549	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	8120	8596	GCA_001047275_1_1_594	GCA_001047275_1_1_594	-	2173235	.	.	hypothetical protein	MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVDQS*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0014	persistent	direct	high	476	0.998	GCA_001047275.1_00621
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	614582	614782	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	8629	8829	GCA_001047275_1_1_595	GCA_001047275_1_1_595	-	2173235	.	.	hypothetical protein	MNELTGRINRFGARAKDEQSLLLKVGEICRDAAATWTTRKSESLNHTAFTFTVKKDGLKEKVMIVL*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0015	persistent	direct	high	200	0.995	GCA_001047275.1_00622
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	614993	615754	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	9040	9801	GCA_001047275_1_1_596	GCA_001047275_1_1_596	+	2173235	.	.	hypothetical protein	MEMQLDKQTLTVVVRNSEPVELSVFAQSMMSLADDYESMCGSAGSHARLYIKEIRQGSIIAELAPLLPLAGTLFEGAGQILAYAKNFIEITDWLMGKGKEPAGVTDSQIRNIANIMQPAASDKNGSIEINVNDNNGSVVNNITYNYFAANTVQNQARRILGERAEASESGDYGQMVMYFVQAAPTKETNQAVIEGIYSRPVKILIPEHIKREMFAEPYPFEKYYIVDVSVQTARGKPRLYKVTGYHGVVDGDD*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0016	shell	direct	high	761	0.999	GCA_001047275.1_00623
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	615853	616254	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	9900	10301	GCA_001047275_1_1_597	GCA_001047275_1_1_597	-	2173235	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MFIPAALHKDEHSAYGVTIPDLPGCFSCGDTVEEAVANARSAAYMHIDGMIEDGGFKNLAVSSIADLSQEPDYHGATWVMIEIDPAKISRQQIRFNVSWPQYLLDRVDEYTSANHETRSGFLAKAALLTMNQA*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0017	shell	direct	high	401	0.998	GCA_001047275.1_00624
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	616708	617526	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	10755	11573	GCA_001047275_1_1_598	GCA_001047275_1_1_598	-	2173235	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MNQYAMRFAVIRFMPYVQTREFANIGIIITHPKSGYFDFKIEQRYSRLSRFFRRFDPPAYKAATRAFAEELQRIGKLAAYSAPDQIRAMLDHLTRPREALIMAAQPGVTLAPDRGQELNRLFDYFVAHSFAKSQPEAELTRQIQAMLKPLQTAYPFKESTIGDPSGFHASIPLVQKAENGEIRKIIKPIYFGQKDPADIYYKSDKWIAGIKRLRRGGYIDRSEILFAYEPPERPDKAQEKALLDVLGDLEEQGIRLADNRSEGKIIRNFACG*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0018	shell	direct	high	818	0.999	GCA_001047275.1_00625
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	617523	618242	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	11570	12289	GCA_001047275_1_1_599	GCA_001047275_1_1_599	-	2173235	.	PF07804.12	HipA-like C-terminal domain	MLQIQTIMDRAEQGVTSPFICMAENGLEYFVKGLHATRASQINEWIGGNMAQALGLPVAPFELLEVGEELYEELPAKMKEIGKGICFGSLAQKGCALLEPADIPRIDTVMQRQIAAFDWFVRNEDRTIGNPNLLYRNCNNSLIVIDHNCAFDTGFNPNNFLQNHIFSSAFRQILEDWVLREEMELWLKSALPAYRKACDNLPPEWAWANEERDLPAAYNRSRTDETVRRIDNGTLWSIS*	hhsuite_tools	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0019	shell	direct	high	719	0.999	GCA_001047275.1_00626
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	618458	619168	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	12505	13215	GCA_001047275_1_1_600	GCA_001047275_1_1_600	-	2173235	.	PDB:2FJR_A	Repressor-protein-CI	MSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKATNIAKLAKILDVSAFWLETGEGSRNTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETASLDSLTVIGRVFWRSVLD*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0020	shell	direct	high	710	0.999	GCA_001047275.1_00627
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	619284	619472	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	13331	13519	GCA_001047275_1_1_601	GCA_001047275_1_1_601	+	2173235	.	PFAM:PF04936.11	transcriptional-regulator	MDEPRDLVLFLKEKMSSAAIAKEVGCSKEFINKIGNGERKNPRYQIVDSLRSLYRKNQNQPK*	phrogs_hmm	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0021	cloud	direct	high	188	0.995	GCA_001047275.1_00628
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	619552	619707	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	13599	13754	GCA_001047275_1_1_602	GCA_001047275_1_1_602	+	2173235	.	.	hypothetical protein	MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYRIAPGLKDGFELLGKQPD*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0022	persistent	direct	high	155	0.994	GCA_001047275.1_00629
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	619684	619872	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	13731	13919	GCA_001047275_1_1_603	GCA_001047275_1_1_603	-	2173235	.	.	hypothetical protein	MPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDDEYLIGLLSK*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0023	persistent	direct	high	188	0.995	GCA_001047275.1_00630
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	620046	620273	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	14093	14320	GCA_001047275_1_1_604	GCA_001047275_1_1_604	+	2173235	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0024	persistent	direct	high	227	0.996	GCA_001047275.1_00631
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	620270	621265	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	14317	15312	GCA_001047275_1_1_605	GCA_001047275_1_1_605	+	2173235	.	pfam13730	Helix-turn-helix domain. 	MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDFEPSDFEPSDFDAKNHQILSDEPSDFALRTIRFCAKNHQILSGEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF*	mmseqs_cdd	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0025	persistent	direct	high	995	0.999	GCA_001047275.1_00632
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	621277	622056	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	15324	16103	GCA_001047275_1_1_606	GCA_001047275_1_1_606	+	2173235	.	PDB:4M4W_K	Replicative-helicase	MALKGASDFLRAFCSVQTERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRREAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA*	rep_hall_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0026	persistent	direct	high	779	0.999	GCA_001047275.1_00633
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	622049	622333	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	16096	16380	GCA_001047275_1_1_607	GCA_001047275_1_1_607	+	2173235	.	.	hypothetical protein	MRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPRNAPNLSGKAGKTLGEYPSLPEI*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0027	persistent	direct	high	284	0.996	GCA_001047275.1_00634
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	622372	622866	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	16419	16913	GCA_001047275_1_1_608	GCA_001047275_1_1_608	+	2173235	.	PFAM:PF11753.7	nucelotide-kinase	MTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0028	persistent	direct	high	494	0.998	GCA_001047275.1_00635
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	623043	623192	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	17090	17239	GCA_001047275_1_1_609	GCA_001047275_1_1_609	+	2173235	.	.	hypothetical protein	MDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0029	persistent	direct	high	149	0.993	GCA_001047275.1_00636
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	623221	623502	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	17268	17549	GCA_001047275_1_1_610	GCA_001047275_1_1_610	+	2173235	.	PFAM:PF05766.11	HNH-endonuclease	MAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA*	phrogs_hmm	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0030	persistent	direct	high	281	0.996	GCA_001047275.1_00637
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	623634	623873	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	17681	17920	GCA_001047275_1_1_611	GCA_001047275_1_1_611	+	2173235	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MPSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0031	persistent	direct	high	240	1.0	GCA_001047275.1_00638
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	624202	625164	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	18249	19211	GCA_001047275_1_1_612	GCA_001047275_1_1_612	-	2173235	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKLTFDASAMVGKTEHSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0032	persistent	direct	high	962	0.999	GCA_001047275.1_00639
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	625676	626035	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	19723	20082	GCA_001047275_1_1_613	GCA_001047275_1_1_613	-	2173235	.	.	hypothetical protein	MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0033	persistent	direct	high	359	0.997	GCA_001047275.1_00640
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	626156	627241	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	20203	21288	GCA_001047275_1_1_614	GCA_001047275_1_1_614	-	2173235	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKS*	hallmark_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0034	persistent	direct	high	1085	0.999	GCA_001047275.1_00641
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	627251	627541	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	21298	21588	GCA_001047275_1_1_615	GCA_001047275_1_1_615	-	2173235	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTANAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTFVFPG*	hallmark_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0035	persistent	direct	high	290	0.997	GCA_001047275.1_00642
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	627542	629110	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	21589	23157	GCA_001047275_1_1_616	GCA_001047275_1_1_616	-	2173235	.	PFAM:PF05616.12	attachment-protein	MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSIGFKLDSSSNTFSKFTEAANFEHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYQTFKEDIKARGCRYDPETDKFVKGYEYANCLWYEDERRINRTYGCYGVDSSIMRLMPDRSRFPEVQQLMESQMERIARPFWDKRKEEIPKDTALKWRLFPFSHCEFFWNGGGCFVRNGDNLIHRVYFKLGRNPKYKEEMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPPPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKQGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0036	persistent	direct	high	1568	0.999	GCA_001047275.1_00643
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	629052	629369	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	23099	23416	GCA_001047275_1_1_617	GCA_001047275_1_1_617	-	2173235	.	PF06575.12	Protein of unknown function (DUF1132)	MNKPFITQAQLALYKYQPSSEYFGQSMAFIAQKEFEEFVNNVKEYDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNSMFE*	hhsuite_tools	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0037	persistent	direct	high	317	0.997	GCA_001047275.1_00644
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	629782	630000	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	23829	24047	GCA_001047275_1_1_618	GCA_001047275_1_1_618	-	2173235	.	CDD:pfam10389	filamentous-major-capsid-protein-B	MKFINTCRKYGAKLAVVTAAPLALAAQANAALPETAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK*	hallmark_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0038	persistent	direct	high	218	0.995	GCA_001047275.1_00646
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	630086	630289	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	24133	24336	GCA_001047275_1_1_619	GCA_001047275_1_1_619	-	2173235	.	.	hypothetical protein	MSRYQQKFIVQELENHEFIYPDSFGDIGFTSNIKSAGKYDSYEDAFSSALEEIGGEFVIFGFYEKED*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0039	persistent	direct	high	203	0.995	GCA_001047275.1_00647
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	630303	630614	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	24350	24661	GCA_001047275_1_1_620	GCA_001047275_1_1_620	-	2173235	.	PFAM:PF07459.10	RstB-protein	MFETSQVTTYTATLLGAKKFKGEIDGNKIDSCTVLVASPMPSNGNAVGFTSESMKFGDSHNFEKLKNLKFPCAVDLTVAMESTGKGLVQKLLDFQVKGAAPKA*	common_virus_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0040	persistent	direct	high	311	0.997	GCA_001047275.1_00648
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	630628	631956	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	24675	26003	GCA_001047275_1_1_621	GCA_001047275_1_1_621	-	2173235	.	PFAM:PF02486.18	Replication-initiation-factor	MKAFEDKALAVSADMADALADGGAAATAVGCPPRLIGGEQNKTPNPKGAEKTENQEFQFEYFSHFVSDGKGRFIEIPLRRGRDDGAFIDQITFTIHENSMTKVTGKGLVSDTEFVVRYSELLEEILGFGITKKLPFKGKFFYQSCYQFGPDNVEYGKVHYGGQCETMLVELNGTGCMAALPGWENRLYEFLSKCVRPKITRIDVAHDFFNGEYTPDQAMLDHDNGHYDVHNMRPKSECRGTAWRNEDGSGKTFYIGKRENSKFTRVYEKGRQFGDVDSPWVRFEGDIEIPLDVLLYSGSYLGGAYPICKEIFKTEAKRMEVKVKNVNLIFDVKLFHARNQVGKMVNFLRDIGWDDSRIVDELVKGVEGYPKGLQPEQYDCKNQTQKFQYIHEEQKAINALNIETLFDDLIEEREYAFPQDRERQHIKDIEYEERQISDFLNN*	rep_hall_hmm	common_virus	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0041	persistent	direct	high	1328	0.999	GCA_001047275.1_00649
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	631943	632167	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	25990	26214	GCA_001047275_1_1_622	GCA_001047275_1_1_622	-	2173235	.	.	hypothetical protein	MFIFYTVNPEHVYFPKAYIMKVFKDKGYESQCITTVSFYICNPTLKQKTENEAYEYGRLFVKELMHKECNRESL*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0042	persistent	direct	high	224	0.996	GCA_001047275.1_00650
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	632563	632769	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	26610	26816	GCA_001047275_1_1_623	GCA_001047275_1_1_623	-	2173235	.	pfam10981	Protein of unknown function (DUF2788). This bacterial family of proteins have no known function.	MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAVLFLVLGLGVFGFVFKELLIKFLVLPK*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0043	persistent	direct	high	206	0.995	GCA_001047275.1_00651
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	632864	634033	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	26911	28080	GCA_001047275_1_1_624	GCA_001047275_1_1_624	-	2173235	.	TIGR01325	O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis. [Amino acid biosynthesis, Aspartate family]	MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAADLFSKKIKGFTYTRTANPTIAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGGHVVSSRSLFGTTVGFINNIVTKFGIGVSRVSPTDINEWKAAVKANTKLLFLETPSNPLGEVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGGVLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLGGVETLSLRMEKQFDNALRIAQWLQEQPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANLGDVRSTITNPWTTTHGRMQPEEKLAAGIRPGLVRLSVGLEYVGDLIDDLKQALAR*	mmseqs_cdd	nonviral_gene	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0044	persistent	direct	high	1169	0.999	GCA_001047275.1_00652
GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote	cenote	CDS	634179	634949	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C36	28226	28996	GCA_001047275_1_1_625	GCA_001047275_1_1_625	-	2173235	.	.	hypothetical protein	MDTNNQDKEPNWEKRLENLRQTRRMNTAPAYVPLTKPSEVGKEEPIPKLDDANRDRVLKAYLKKWQEEHNSAVADCGEEVETDPMIVLQENWLNAQASLQMPVSEKHIESRRRIRFDAKKDSAEFETAQIEGGENADAAESGTAADGVAENGEGGAEEALMPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGMIRTAVQKQMALFTYQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR*	.	hypothetical_protein	C36	28996	605954	634950	GCA_001047275.1|CP012028.1@region_605955_634950@tool_cenote_CDS_0045	persistent	direct	high	770	0.999	GCA_001047275.1_00653
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	640058	641386	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	1	1329	GCA_001047275_1_1_631	GCA_001047275_1_1_631	-	2173235	.	cd01344	PL2_Passenger_AT	MSNGARWTVTNDSMLKELDLSEDAQVEFSDNNKFVKVSVSKLKGDGGVFKMYGDIVKGESDKLITRKGSEGTHIIEYMDDAKAKTTGREYLKLVENKGNQEDNKASNKASYKLNVRCTEQGGWCFALGESGASKKVNISTDGKRDFYLYPDTLTPGASSSVLFGEALYQLNAVSDETLVQRMGEIHADGTPQEDNNVWIKRVGGKFSGSRSDYRVGGYGNRYWGFAGGFNRTGFGDKWIHYKGLMLRHLQSSYASEDYVGSGKIYGRAAGVYSAWLNRESRAYYDLVANIARYKGSYGLTNYAGKRVESNEARLNAYMLSAEAGRRMEKQDGGKNLSVAAGSAVVLLVYARLRLSAVKRAVCRDGQLPQPDGAVRLSGGRGRFGRRQAEHLRQADVQTRVYRHDPPQVQRLCRGGIQTPGRLVGIRLGRGAPQCRKRTAALF*	hhsuite_tools	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0001	cloud	direct	high	1328	0.999	GCA_001047275.1_00659
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	641720	642373	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	1663	2316	GCA_001047275_1_1_632	GCA_001047275_1_1_632	+	2173235	.	COG3676	Transposase and inactivated derivatives  [Mobilome: prophages, transposons]. 	MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFYRKIRTVANHRLALAADEVFGGAAGPGASCFGGRRKGRRGRGAAGKAVVFGIPKRNGRAYTVAADDAEPETLLPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRRNHINGIGDFWNQAKRALRKYNGIDRKPFPPLLRECEFRFNFGTPSRQLKILRDRCGI*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0002	persistent	direct	high	653	0.998	GCA_001047275.1_00660
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	642341	643603	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	2284	3546	GCA_001047275_1_1_633	GCA_001047275_1_1_633	-	2173235	.	.	hypothetical protein	MKQKKTVQCILLGFAAASMHAQGAAAANSGTIEKTDKYTLVLAKQGQENNYTLNGGTEVKPLNSLIIAANGGTNNITIKGKLADGPADAPPTIDNNSIERNINKNGYTYAWQNWSGAVMLVDQSYEGENKVTFENVTIAAHNAPAGILSDDRHKSSSLAPAMLAFKGRNTINMDADSNANSSNEGILLLNNGEKMGEYRLVSEEGSTLNINIKSGKDKGQGITANHYGNSDINFNKASPNITTMEFKGDVNIKIDRNGQEEAESNGFGFYSSRKLGNKKQIPEGSKMEAIFRGNVDIVATPVYDEQGRPKSIGSAFAIDGKYSKVEVVGGEGKVVKIKGDIFAYNGGSVSVNLANKDSYFEGEAHIGKRSFAKGKDMFALTVDADGYELTPDTKSIEKKKLNVRGCTRLSLNSTPIPQDF*	.	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0003	persistent	direct	high	1262	0.999	GCA_001047275.1_00661
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	644303	645109	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	4246	5052	GCA_001047275_1_1_634	GCA_001047275_1_1_634	+	2173235	.	PRK06427	bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	MKGSFVQTLAIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVTAQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCSFGRRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDILTPNLPEAEALTGVHIENRKDAERAAKILLDYGVKNVIIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCTFSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0004	persistent	direct	high	806	0.999	GCA_001047275.1_00663
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	645167	646021	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	5110	5964	GCA_001047275_1_1_635	GCA_001047275_1_1_635	-	2173235	.	PRK12335	tellurite resistance protein TehB; Provisional	MGQSGELFCFGQMPVWKVENLPEVLLSGYSSEEGEWVCLNVLQGDVEVRAPDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFHKKYGMSATHSAVAAAQDTVPAGRALDMVCGQGRNALFLGLKGFDVTAADCNPAALANVAELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAGGYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPIRFKFVTMLAKKPG*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0005	persistent	direct	high	854	0.999	GCA_001047275.1_00664
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	646149	646586	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	6092	6529	GCA_001047275_1_1_636	GCA_001047275_1_1_636	+	2173235	.	PDB:1JL1_A	RIBONUCLEASE-HI	MDTPVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTNNRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDDLWQELDALVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS*	common_virus_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0006	persistent	direct	high	438	1.0	GCA_001047275.1_00665
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	646917	647879	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	6860	7822	GCA_001047275_1_1_637	GCA_001047275_1_1_637	-	2173235	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKLTFDASAMVGKTEHSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA*	common_virus_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0007	persistent	direct	high	962	0.999	GCA_001047275.1_00666
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	648391	648750	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	8334	8693	GCA_001047275_1_1_638	GCA_001047275_1_1_638	-	2173235	.	.	hypothetical protein	MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV*	.	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0008	persistent	direct	high	359	0.997	GCA_001047275.1_00667
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	648871	649956	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	8814	9899	GCA_001047275_1_1_639	GCA_001047275_1_1_639	-	2173235	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKS*	hallmark_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0009	persistent	direct	high	1085	0.999	GCA_001047275.1_00668
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	649966	650256	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	9909	10199	GCA_001047275_1_1_640	GCA_001047275_1_1_640	-	2173235	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTSNAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTFVFPG*	hallmark_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0010	persistent	direct	high	290	0.997	GCA_001047275.1_00669
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	650257	651777	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	10200	11720	GCA_001047275_1_1_641	GCA_001047275_1_1_641	-	2173235	.	PFAM:PF05616.12	attachment-protein	MMYSFEANANAVKISETLSVDTGQGAKIHKFVPKNSKTYSSDLIKTVDLTHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYQTFKEDIKARGCRYDPETDKFVKGYEYSNCIWDFVENGIKTYGCYGVDSSIMRLEKDYERFPEVKQLMESQMERIARPFWDKRKEEIPKDTALKLHLSTFSHCEFFWNGGGCFVRNGDNLIHRVYFKLERNPKYKEEMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKEGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE*	common_virus_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0011	persistent	direct	high	1520	0.999	GCA_001047275.1_00670
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	651761	652078	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	11704	12021	GCA_001047275_1_1_642	GCA_001047275_1_1_642	-	2173235	.	PF06575.12	Protein of unknown function (DUF1132)	MNKPFITQAQLALYKYQPSSEYFGQSMAVIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFPDNSEMVIKESLKDGHKTYKFEFCQIVDNCNFDDVFV*	hhsuite_tools	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0012	cloud	direct	high	317	0.997	GCA_001047275.1_00671
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	652491	652709	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	12434	12652	GCA_001047275_1_1_643	GCA_001047275_1_1_643	-	2173235	.	CDD:pfam10389	filamentous-major-capsid-protein-B	MKFINTCRKYGAKLAVVTAAPLALAAQANAALPETAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK*	hallmark_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0013	persistent	direct	high	218	0.995	GCA_001047275.1_00673
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	652783	652980	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	12726	12923	GCA_001047275_1_1_644	GCA_001047275_1_1_644	-	2173235	.	.	hypothetical protein	MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAVNAGLEEIGNQCEFVVFGFLKD*	.	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0014	persistent	direct	high	197	0.995	GCA_001047275.1_00674
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	652985	653275	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	12928	13218	GCA_001047275_1_1_645	GCA_001047275_1_1_645	-	2173235	.	PFAM:PF07459.10	RstB-protein	MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALGSSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVTGFQFVKKG*	common_virus_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0015	persistent	direct	high	290	0.997	GCA_001047275.1_00675
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	653320	654669	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	13263	14612	GCA_001047275_1_1_646	GCA_001047275_1_1_646	-	2173235	.	PFAM:PF02486.18	Replication-initiation-factor	MEDKQGMTKEVAGVMTEAPADGRKPATASNLPPPPYLTGGGTETETAGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQITFSIHEDTFFHVYGLSFDLFDDDDFIRAASAKMEEIFGFGIIEKAKHSGGRFYEGCWLMGTENAQYGRVHYGGQRETMLVELTAVGCNAANIGWESRLFDFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGLFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVVSADRCLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLALEAYDCAFLKSQVIHEQPAFKPYNDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA*	rep_hall_hmm	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0016	persistent	direct	high	1349	0.999	GCA_001047275.1_00676
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	654808	655230	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	14751	15173	GCA_001047275_1_1_647	GCA_001047275_1_1_647	-	2173235	.	COG3727	G:T-mismatch repair DNA endonuclease, very short patch repair protein [Replication, recombination and repair]. 	MTDIFTPSKRSFVMSKIHSKETKPEVLVRKFLFSQGFRYRKNDKRYAGKPDIVLPKYKTVVFIHGCFWHGHSCNKGHIPKSNMDFWLEKITKNRERDIKNETELEKIGFKVIVVWECELKNKAICRERLNRLVEEIKDAV*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0017	persistent	direct	high	422	0.998	GCA_001047275.1_00677
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	655236	655832	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	15179	15775	GCA_001047275_1_1_648	GCA_001047275_1_1_648	-	2173235	.	TIGR02391	TIGR02391 family protein. This family consists of a relatively rare (~ 8 occurrences per 200 genomes) prokaryotic protein family. Genes for members are appear to be associated variously with phage and plasmid regions, restriction system loci, transposons, and housekeeping genes. The function is unknown. [Hypothetical proteins, Domain]	MKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAEVISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTGLHSIDGRELIEKAFGSKKSMLLLTNNKTQAEQNLEDGLEQLACGTWTGFRNPVQHELRANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRAKPTSP*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0018	persistent	direct	high	596	0.998	GCA_001047275.1_00678
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	656022	656879	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	15965	16822	GCA_001047275_1_1_649	GCA_001047275_1_1_649	-	2173235	.	COG0326	Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]. 	MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLGKLALFRLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVKPNTENGTTITLTELTKKQGYPLDNYVGHLSRLFDFPAQDFKIKVSLNGSEPRIIDGNLKYNLVTPQFEWEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEFFTDSESSHF*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0019	persistent	direct	high	857	0.999	GCA_001047275.1_00679
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	656893	657222	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	16836	17165	GCA_001047275_1_1_650	GCA_001047275_1_1_650	-	2173235	.	COG0270	Site-specific DNA-cytosine methylase [Replication, recombination and repair]. 	MAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPAPTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVPPMYAEKIGRAIVDNIEC*	mmseqs_cdd	common_virus	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0020	persistent	direct	high	329	0.997	GCA_001047275.1_00680
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	658238	658384	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	18181	18327	GCA_001047275_1_1_651	GCA_001047275_1_1_651	+	2173235	.	.	hypothetical protein	MSRIYLPLLFPPHIVERGLLYFQQDKVRDVQKISLGRYRAKVFDSENY*	.	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0021	persistent	direct	high	146	0.993	GCA_001047275.1_00681
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	658761	659210	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	18704	19153	GCA_001047275_1_1_652	GCA_001047275_1_1_652	-	2173235	.	COG4968	Tfp pilus assembly protein PilE  [Cell motility, Extracellular structures]. 	MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0022	persistent	direct	high	449	0.998	GCA_001047275.1_00683
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	659298	659597	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	19241	19540	GCA_001047275_1_1_653	GCA_001047275_1_1_653	-	2173235	.	TIGR01259	comEA protein. This model describes the ComEA protein in bacteria. The com E locus is obligatory for bacterial cell competence - the process of internalizing the exogenous added DNA. Lesions in the loci has been variously described for the appearance of competence-related pheonotypes and impairment of competence, suggesting their intimate functional role in bacterial transformation. [Cellular processes, DNA transformation]	MKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK*	mmseqs_cdd	nonviral_gene	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0023	persistent	direct	high	299	0.997	GCA_001047275.1_00684
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	CDS	660310	660960	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	20253	20903	GCA_001047275_1_1_654	GCA_001047275_1_1_654	+	2173235	.	.	hypothetical protein	MLSALISSELSYPAMQLALQPVHQRFVHSGPLVLGAAPVKLPTPTADRDQTVSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLPDLSVSQLSYLLPLHYQSDFRPDLGNLRTPPLRFGRRPPQSNCLPCTVPDPDDGSGLEPQRHQGGISRTTPQRLASLLPSLPPILHK*	.	hypothetical_protein	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_CDS_0024	.	unmatched_CDS	none	0	0	.
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	690936	691898	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	1	963	GCA_001047275_1_1_677	GCA_001047275_1_1_677	-	2173235	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKLTFDASAMVGKTEHSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAQESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA*	common_virus_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0001	persistent	direct	high	962	0.999	GCA_001047275.1_00711
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	692410	692769	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	1475	1834	GCA_001047275_1_1_678	GCA_001047275_1_1_678	-	2173235	.	.	hypothetical protein	MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV*	.	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0002	persistent	direct	high	359	0.997	GCA_001047275.1_00712
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	692890	693975	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	1955	3040	GCA_001047275_1_1_679	GCA_001047275_1_1_679	-	2173235	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIYLFTGNMGAGKTPRVVSMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSSSRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKS*	hallmark_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0003	persistent	direct	high	1085	0.999	GCA_001047275.1_00713
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	693985	694275	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	3050	3340	GCA_001047275_1_1_680	GCA_001047275_1_1_680	-	2173235	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTANAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTFVFPG*	hallmark_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0004	persistent	direct	high	290	0.997	GCA_001047275.1_00714
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	694276	695064	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	3341	4129	GCA_001047275_1_1_681	GCA_001047275_1_1_681	-	2173235	.	PFAM:PF05616.12	attachment-protein	MDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPPPEVSPAENPANNPDPDENPGTRPNPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKQGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE*	common_virus_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0005	persistent	direct	high	788	0.999	GCA_001047275.1_00715
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	695403	695687	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	4468	4752	GCA_001047275_1_1_682	GCA_001047275_1_1_682	+	2173235	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MKLLAALIPLLMSVAGRILTALGLMAVTYAGVDRLAAHFQQAITHSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK*	hallmark_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0006	persistent	direct	high	284	0.996	GCA_001047275.1_00716
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	695688	696875	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	4753	5940	GCA_001047275_1_1_683	GCA_001047275_1_1_683	+	2173235	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGVRRKVFTNIKGLKIPHTHIETDAKKLPKSTDEQLSAHDMYEWIKKPENVGAIVIVDEAQDVWPARSAGSKIPENVQWLNTHRHQGIDIFVLTQGPKLLDQNLRTLVKRHYHIAANKMGLRTLLEWKVCADDPVKMASSAFSSIYTLDKKVYDLYESAEIHTVNKVKRSKWFYALPVIILLIPLFVGLSYKMLGSYGKKQEEPAAQESAATEQQAVLPDKTEGESVNNGNLTADMFVPTLPEKPESKPIYNGVRQVRTFEYIAGCIEGGRTGCTCYSHQGTALKEVTELMCKDYVKNGLPFNPYKEESQGQEVQQSAQQHSDRAQVATLGGKPQQNLMYDNWEERGKPFEGIGGGVVGSAN*	hallmark_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0007	persistent	direct	high	1187	0.999	GCA_001047275.1_00717
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	697090	698046	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	6155	7111	GCA_001047275_1_1_684	GCA_001047275_1_1_684	+	2173235	.	PFAM:PF01548.16	Transposase	MNIIGSDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIKGNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSNLIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQQQKQIKNRLHSTEEDFIRNIHQDLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKTANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINNLKKAGKPKMVIIVAIMRKLAKPAYYIVKTGQPYDAERHRLNQ*	common_virus_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0008	persistent	direct	high	956	0.999	GCA_001047275.1_00718
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	698337	698876	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	7402	7941	GCA_001047275_1_1_685	GCA_001047275_1_1_685	+	2173235	.	PDB:1WTH_A	Tail-associated-lysozyme	MTELPWIAEARRHIGLKEIPGAKHNPTIVQWLKETGGFPGAAKSWYFEDETPWCGLFVGHCLGKSGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKAVPSSPAEGRYRLTAAAATAKQGAGEA*	common_virus_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0009	persistent	direct	high	539	0.998	GCA_001047275.1_00719
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	698876	699034	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	7941	8099	GCA_001047275_1_1_686	GCA_001047275_1_1_686	+	2173235	.	.	hypothetical protein	MMNPTEFLKARIAEWEAKSKEAGGNADFKAFEFAESEIKNYKAMLKTYERPD*	.	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0010	persistent	direct	high	158	0.994	GCA_001047275.1_00720
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	699018	699359	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	8083	8424	GCA_001047275_1_1_687	GCA_001047275_1_1_687	+	2173235	.	PFAM:PF10828.7	Rz-like-spanin	MNGLIKNPKLIAVSVCAVFVAGAWQYDRAAQYRRGYGAAMLEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG*	phrogs_hmm	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0011	persistent	direct	high	341	0.997	GCA_001047275.1_00721
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	699702	700229	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	8767	9294	GCA_001047275_1_1_688	GCA_001047275_1_1_688	+	2173235	.	PFAM:PF02452.16	MazF-like-growth-inhibitor	MPYPMGRLRTLKGSGGIFIGRLFFATALHKAVFCVRTAIIAACHRQERLMPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKPVTVVPLSSTEPVPLADCHHKMSENPLPDKPHIQCRAKCDMTATVGLARLDRYKPKGRDRCIPIISEEDFQAVKTAVAKAFKLY*	phrogs_hmm	nonviral_gene	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0012	persistent	direct	moderate	380	0.72	GCA_001047275.1_00723
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	700430	701272	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	9495	10337	GCA_001047275_1_1_689	GCA_001047275_1_1_689	-	2173235	.	PFAM:PF10547.8	P22_AR-protein	MQNTISVFSFKSQNVRTQILGAEPWFCLGDVAEILQIQNARQLPLKDQGIQKSSVATKKGNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPKTTADDRTGLRRAVAALVGRKRIGYSSAYSMIHQRFNVEAVEGIPADKLPEAVAYVHALTLHTGLAGEVPDREPLPAPQPALPISGNALADIAAMVYYGTRMIELGKDVSAPLKQLGCKQAVTMWTVWHETRSILKRSVAALEVLRGYADKDASGRIAACLEGIYGKAAAR*	common_virus_hmm	common_virus	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0013	persistent	direct	high	842	0.999	GCA_001047275.1_00724
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	701771	701947	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	10836	11012	GCA_001047275_1_1_690	GCA_001047275_1_1_690	-	2173235	.	.	hypothetical protein	MNPTKQSKKSYESKRVLKHVSFNTEKEANLLEFSNNLDFSKWVKEKLKHELELEKLKK*	.	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0014	persistent	direct	high	176	0.994	GCA_001047275.1_00725
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	702275	702766	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	11340	11831	GCA_001047275_1_1_691	GCA_001047275_1_1_691	-	2173235	.	cd00563	D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding	MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEKDARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAPAEQAQRLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKVVPD*	mmseqs_cdd	nonviral_gene	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0015	persistent	direct	high	491	0.998	GCA_001047275.1_00726
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	702840	703598	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	11905	12663	GCA_001047275_1_1_692	GCA_001047275_1_1_692	-	2173235	.	6BHF_A	Putative peptidyl-prolyl cis-trans isomerase HP_0175	MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADRHAEQSQRPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEYVRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKRYPNDEQAFDGFIMAQQLPEPLASQFAGMNRGDVTRNPVKLGERYYLFKLGAVGKNPDAQPFELVRNQLEQGLRQEKARLKIDALLEENGVKP*	hhsuite_tools	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0016	persistent	direct	high	758	0.999	GCA_001047275.1_00727
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	703668	704534	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	12733	13599	GCA_001047275_1_1_693	GCA_001047275_1_1_693	-	2173235	.	5EZ1_B	Putative peptidyl-prolyl cis-trans isomerase HP_0175	MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDDKKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEILTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKRTGAPDGYVPLKDLEQGVPPLYQAIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVGALLGKANIKPAK*	hhsuite_tools	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0017	persistent	direct	high	866	0.999	GCA_001047275.1_00728
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	704583	704861	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	13648	13926	GCA_001047275_1_1_694	GCA_001047275_1_1_694	-	2173235	.	COG0271	Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]. 	MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLVVSGRFEGLSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD*	mmseqs_cdd	nonviral_gene	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0018	persistent	direct	high	278	0.996	GCA_001047275.1_00729
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	704861	705151	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	13926	14216	GCA_001047275_1_1_695	GCA_001047275_1_1_695	-	2173235	.	PRK11370	YciI family protein. 	MEYFMLLATDGEDVHEARMAARPEHFKRLETLKSEGRLLTAGPNLLPDNPERVSGSLIVAQFESLDAAQAWAEDDPYVHAGVYSEVLIKPFKAVFK*	mmseqs_cdd	nonviral_gene	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0019	persistent	direct	high	290	0.997	GCA_001047275.1_00730
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	705154	705684	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	14219	14749	GCA_001047275_1_1_696	GCA_001047275_1_1_696	-	2173235	.	TIGR00997	intracellular septation protein A. This partially characterized protein, whose absence can cause a cell division defect in an intracellularly replicating bacterium, is found only so far only in the Proteobacteria. [Cellular processes, Cell division]	MKFVSDLLSVILFFATYTVTKNMIAAAAVALVAGVVQAAFLYWKHKRLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPTVLFWCGALFLLGSHLAGKNGLKASIGREIQLPDAVWGKLTYMWVGFLIFMGIANWFVFTRFEAQWVNYKMFGSTALMLFFFIIQGIYLSTYLKKED*	mmseqs_cdd	nonviral_gene	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0020	persistent	direct	high	530	0.998	GCA_001047275.1_00731
GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote	cenote	CDS	706791	708308	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C42	15856	17373	GCA_001047275_1_1_697	GCA_001047275_1_1_697	+	2173235	.	.	hypothetical protein	MKNLKQKLPRPKQKRKNRPFDPNPNPQCPKLRLRRQNANPDLYPLQILPHRKPLPNPPPQEAAASAIDTPTDETGNTVSEPVAETASEVAAEPVAEPVEQVSAKEETESGLFDGLFGGSYTLLLAGGGTALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIKITFAEVETPATPEPAPKNDVNDTLALGGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTDFYNNLFSNNHIGTEETASAKPAAPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLKVYETGAVAETAPETPDFNAAADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTGFPSESVGSDAPSEAKYDLAEMHLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI*	.	hypothetical_protein	C42	17373	690936	708309	GCA_001047275.1|CP012028.1@region_690937_708309@tool_cenote_CDS_0021	persistent	direct	high	1517	0.999	GCA_001047275.1_00732
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1772914	1774101	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	1	1188	GCA_001047275_1_1_1727	GCA_001047275_1_1_1727	+	2173235	.	TIGR03538	succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).	MNTLLKQLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLRELEKYPLTAGLPELRQACANWLKRRYDGLTVNPDNEILPVLGSREALFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWERTKLVFVCSPNNPSGSVPDLDGWREVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQSGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWNDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVSLYR*	mmseqs_cdd	nonviral_gene	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0001	persistent	direct	high	1187	0.999	GCA_001047275.1_01821
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1774257	1775036	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	1344	2123	GCA_001047275_1_1_1728	GCA_001047275_1_1_1728	+	2173235	.	PRK02101	peroxide stress protein YaaA. 	MFFVLSPAKNLNEKDPCPVSEFTQPDLLAESEILMRQLRELAPQQIAELMRVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLNTNQIQYLQNHVRLLSGLYGLMRPLDLMQPYRLEMGTSFANLRGKNLYEFWGDIITNLLNDTLAQAGSNTLVNLASQEYFKSVNVKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRYAAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK*	mmseqs_cdd	nonviral_gene	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0002	persistent	direct	high	779	0.999	GCA_001047275.1_01822
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1775567	1776763	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	2654	3850	GCA_001047275_1_1_1729	GCA_001047275_1_1_1729	+	2173235	.	PDB:1Z19_B	Integrase	MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKKVRADFAFEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPHVAMRRSGLDTTAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLRLADNGK*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0003	persistent	direct	high	1196	0.999	GCA_001047275.1_01825
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1777119	1777388	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	4206	4475	GCA_001047275_1_1_1730	GCA_001047275_1_1_1730	-	2173235	.	.	hypothetical protein	MESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHNADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0004	persistent	direct	high	269	0.996	GCA_001047275.1_01826
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1777446	1777586	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	4533	4673	GCA_001047275_1_1_1731	GCA_001047275_1_1_1731	-	2173235	.	.	hypothetical protein	MNRDGGGCGNFGGLGKGYAEYERRNCRMPSRKKAETRTNRNQRKED*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0005	persistent	ambiguous	low	3	0.021	GCA_001047275.1_01827
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1777583	1778266	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	4670	5353	GCA_001047275_1_1_1732	GCA_001047275_1_1_1732	-	2173235	.	PF10979.8	Protein of unknown function (DUF2786)	MDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAEDIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETSAYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEEKAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTGFVKQIGGQT*	hhsuite_tools	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0006	persistent	direct	high	683	0.999	GCA_001047275.1_01827
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1778277	1778813	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	5364	5900	GCA_001047275_1_1_1733	GCA_001047275_1_1_1733	-	2173235	.	PFAM:PF02384.15	DNA-methyltransferase	MQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLVAAKVRRYCGEHPGVFDGAAGSRQLERYIKPSEFHAVEIQPEACKALLQNYPAAAGNLGRRKQKKPRVRKRISPSRMARPNRKQSERRMGKGAKLKYRTN*	phrogs_hmm	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0007	persistent	direct	high	536	0.998	GCA_001047275.1_01828
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1778924	1779139	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	6011	6226	GCA_001047275_1_1_1734	GCA_001047275_1_1_1734	-	2173235	.	.	hypothetical protein	MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0008	persistent	direct	high	215	0.995	GCA_001047275.1_01829
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1779191	1779682	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	6278	6769	GCA_001047275_1_1_1735	GCA_001047275_1_1_1735	-	2173235	.	PFAM:PF05565.10	resistance-protein	MTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0009	persistent	direct	high	491	0.998	GCA_001047275.1_01830
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1779679	1779861	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	6766	6948	GCA_001047275_1_1_1736	GCA_001047275_1_1_1736	-	2173235	.	.	hypothetical protein	MANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0010	persistent	direct	high	182	0.995	GCA_001047275.1_01831
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1780001	1780687	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	7088	7774	GCA_001047275_1_1_1737	GCA_001047275_1_1_1737	-	2173235	.	.	hypothetical protein	MSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKQPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGQTEHPQGNAAPAEDIEDDIPFN*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0011	persistent	direct	high	686	0.999	GCA_001047275.1_01832
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1780756	1780917	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	7843	8004	GCA_001047275_1_1_1738	GCA_001047275_1_1_1738	-	2173235	.	.	hypothetical protein	MSFHPETAYTGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0012	persistent	direct	high	161	0.994	GCA_001047275.1_01833
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1780914	1781192	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	8001	8279	GCA_001047275_1_1_1739	GCA_001047275_1_1_1739	-	2173235	.	.	hypothetical protein	MKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAEVAELSAEIWLEERHLNADEEEAGCRRVHGDAEVPGGKE*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0013	persistent	direct	high	278	0.996	GCA_001047275.1_01834
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1781345	1781677	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	8432	8764	GCA_001047275_1_1_1740	GCA_001047275_1_1_1740	-	2173235	.	.	hypothetical protein	MKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYTQEDWETYLTEDASRVGKDTEAAMNYAIDEREWFALAENIGRLANS*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0014	persistent	direct	high	332	0.997	GCA_001047275.1_01835
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1781818	1782093	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	8905	9180	GCA_001047275_1_1_1741	GCA_001047275_1_1_1741	-	2173235	.	.	hypothetical protein	MSYLDQPLKHGYGNGNGSGNGSGYGNGYGKGYGNGYGGVDGGGSGSGYGNGKGYGNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0015	persistent	direct	high	275	0.996	GCA_001047275.1_01836
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1782090	1782566	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	9177	9653	GCA_001047275_1_1_1742	GCA_001047275_1_1_1742	-	2173235	.	.	hypothetical protein	MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVDQS*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0016	persistent	direct	high	476	0.998	GCA_001047275.1_01837
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1782599	1782799	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	9686	9886	GCA_001047275_1_1_1743	GCA_001047275_1_1_1743	-	2173235	.	.	hypothetical protein	MNELISRINRFGARAKDGQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0017	persistent	direct	high	200	0.995	GCA_001047275.1_01838
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1782997	1783410	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	10084	10497	GCA_001047275_1_1_1744	GCA_001047275_1_1_1744	-	2173235	.	.	hypothetical protein	MIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLCLSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISGLPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0018	persistent	direct	high	413	0.998	GCA_001047275.1_01839
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1783407	1783907	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	10494	10994	GCA_001047275_1_1_1745	GCA_001047275_1_1_1745	-	2173235	.	PFAM:PF10078.8	transcriptional-regulator	MKNCTPTNGTWFKMGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPNTTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA*	phrogs_hmm	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0019	persistent	direct	high	500	0.998	GCA_001047275.1_01840
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1783885	1784322	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	10972	11409	GCA_001047275_1_1_1746	GCA_001047275_1_1_1746	-	2173235	.	.	hypothetical protein	MELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGLYKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQPNGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0020	persistent	direct	high	437	0.998	GCA_001047275.1_01841
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1784437	1785099	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	11524	12186	GCA_001047275_1_1_1747	GCA_001047275_1_1_1747	-	2173235	.	PDB:2FJR_A	Repressor-protein-CI	MFSGEQLGQAISEAIKRKNVSQKEVADHFGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRFPRLNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIENGDVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGEDLNAVRIIGRIRGAWRLSQF*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0021	persistent	direct	high	662	0.998	GCA_001047275.1_01842
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1785228	1785458	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	12315	12545	GCA_001047275_1_1_1748	GCA_001047275_1_1_1748	+	2173235	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK*	mmseqs_cdd	nonviral_gene	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0022	persistent	direct	high	230	0.996	GCA_001047275.1_01843
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1785538	1785693	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	12625	12780	GCA_001047275_1_1_1749	GCA_001047275_1_1_1749	+	2173235	.	.	hypothetical protein	MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYRIAPGLKDGFELLGKQPD*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0023	persistent	direct	high	155	0.994	GCA_001047275.1_01844
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1785670	1785858	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	12757	12945	GCA_001047275_1_1_1750	GCA_001047275_1_1_1750	-	2173235	.	.	hypothetical protein	MPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDDEYLIGLLSK*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0024	persistent	direct	high	188	0.995	GCA_001047275.1_01845
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1786032	1786259	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	13119	13346	GCA_001047275_1_1_1751	GCA_001047275_1_1_1751	+	2173235	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV*	mmseqs_cdd	nonviral_gene	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0025	persistent	direct	high	227	0.996	GCA_001047275.1_01846
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1786256	1787251	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	13343	14338	GCA_001047275_1_1_1752	GCA_001047275_1_1_1752	+	2173235	.	pfam13730	Helix-turn-helix domain. 	MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDFEPSDFEPSDFDAKNHQILSDEPSDFALRTIRFCAKNHQILSGEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF*	mmseqs_cdd	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0026	persistent	direct	high	995	0.999	GCA_001047275.1_01847
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1787263	1788042	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	14350	15129	GCA_001047275_1_1_1753	GCA_001047275_1_1_1753	+	2173235	.	PDB:4M4W_K	Replicative-helicase	MALKGASDFLRAFCSVQTERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRREAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA*	rep_hall_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0027	persistent	direct	high	779	0.999	GCA_001047275.1_01848
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1788035	1788319	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	15122	15406	GCA_001047275_1_1_1754	GCA_001047275_1_1_1754	+	2173235	.	.	hypothetical protein	MRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPRNAPNLSGKAGKTLGEYPSLPEI*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0028	persistent	direct	high	284	0.996	GCA_001047275.1_01849
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1788358	1788852	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	15445	15939	GCA_001047275_1_1_1755	GCA_001047275_1_1_1755	+	2173235	.	PFAM:PF11753.7	nucelotide-kinase	MTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0029	persistent	direct	high	494	0.998	GCA_001047275.1_01850
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1789029	1789178	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	16116	16265	GCA_001047275_1_1_1756	GCA_001047275_1_1_1756	+	2173235	.	.	hypothetical protein	MDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0030	persistent	direct	high	149	0.993	GCA_001047275.1_01851
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1789207	1789488	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	16294	16575	GCA_001047275_1_1_1757	GCA_001047275_1_1_1757	+	2173235	.	PFAM:PF05766.11	HNH-endonuclease	MAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKAVRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA*	phrogs_hmm	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0031	persistent	direct	high	281	0.996	GCA_001047275.1_01852
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1789620	1789916	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	16707	17003	GCA_001047275_1_1_1758	GCA_001047275_1_1_1758	+	2173235	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MPSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELEMEQTDAADEGWDFIGQEGWDV*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0032	persistent	direct	high	297	1.0	GCA_001047275.1_01853
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1789909	1790214	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	16996	17301	GCA_001047275_1_1_1759	GCA_001047275_1_1_1759	+	2173235	.	pfam07102	Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	MSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLKSGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK*	mmseqs_cdd	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0033	persistent	direct	high	305	0.997	GCA_001047275.1_01854
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1790211	1790594	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	17298	17681	GCA_001047275_1_1_1760	GCA_001047275_1_1_1760	+	2173235	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKRSVEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKLSVREMSEYQEKIISWASMEHGVLWD*	mmseqs_cdd	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0034	persistent	direct	high	383	0.997	GCA_001047275.1_01855
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1790585	1791103	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	17672	18190	GCA_001047275_1_1_1761	GCA_001047275_1_1_1761	+	2173235	.	PFAM:PF05551.10	homing-endonuclease	MGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGFSGKEVFLYKGRLGYLKLKIFKKQYNAHRLIWLFVYGKHASSIDHINRDKTDNRISNLRDVTHAENMKNRGKFKNNTSGHTGVYFHKPSKKWQARIMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0035	persistent	direct	high	518	0.998	GCA_001047275.1_01856
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1791168	1791590	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	18255	18677	GCA_001047275_1_1_1762	GCA_001047275_1_1_1762	+	2173235	.	.	hypothetical protein	MSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFTKLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSLGALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDL*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0036	persistent	direct	high	422	0.998	GCA_001047275.1_01857
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1791590	1792129	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	18677	19216	GCA_001047275_1_1_1763	GCA_001047275_1_1_1763	+	2173235	.	PFAM:PF07141.10	terminase-small-subunit	MPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKERVWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLKQVTDAEAKRVAAVQRRHRNLAENLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIERKSYGMDTAESKISESAKTAGIRIEFVGPEDDGKDG*	phrogs_hmm	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0037	persistent	direct	high	539	0.998	GCA_001047275.1_01858
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1792110	1793384	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	19197	20471	GCA_001047275_1_1_1764	GCA_001047275_1_1_1764	+	2173235	.	PDB:5OE8_A	Large-Terminase	MTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLALGAQRPLRILCVREIQKSMRDTVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFSGLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDETYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVSEGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLMSVRIIGYIEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQNATGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGADMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY*	hallmark_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0038	persistent	direct	high	1274	0.999	GCA_001047275.1_01859
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1793384	1795636	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	20471	22723	GCA_001047275_1_1_1765	GCA_001047275_1_1_1765	+	2173235	.	PFAM:PF16510.4	Portal-protein	MGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRAVADKEMDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTADGETGGRDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYECGVIHRNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDWRISGEMLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRDKKTGRTVEFDGANPNHREMAANGAVLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFPYVPFFGFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQFRRNIARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPSFMGNRGNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTVVIEGDAITQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGAMSEAVKSLPPEYQAAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQDALAKSGNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAPVADAVMQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSANHAQTGMETPTVSDNL*	hallmark_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0039	persistent	direct	high	2252	1.0	GCA_001047275.1_01860
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1795873	1797069	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	22960	24156	GCA_001047275_1_1_1766	GCA_001047275_1_1_1766	+	2173235	.	.	hypothetical protein	MGLFEPSAGDFWEMKEKEKKEKARKGAEERERAAAQAHRADAVRRTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDARAGADFARRDTRPTDAGGRTPPPLGFDGNVYRDGKPVRDFDAQRPLVSAGPDALSPEERELYRRATTPHAGALNGQLTAAQLNAARGIVAEHNKNAAVRELGRERLAAAAAENAANREAVLQEGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALELEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVADPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAQLGFKPNGQKTAGGKIIYENEKGEKRVEQ*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0040	persistent	direct	high	1196	0.999	GCA_001047275.1_01861
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1797066	1798280	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	24153	25367	GCA_001047275_1_1_1767	GCA_001047275_1_1_1767	+	2173235	.	.	hypothetical protein	MSDLVRYDPLEHGRLAGGLKEYRGFTQKDARAAADDTALTRGFKNSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWEKGGGVGGGLSNVWGELKKDWREKGLDGALEDVGEMGGAVLEQAPNALVPIATTTAGGILGALAGGNAAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKGAVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAADKAAVAAAKGTPEFAALAKESAKGGLGGAARHAAAYATESAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVGFAGTKAYAAVTDPLRPPAGRKAGAQGGIGGNRKAGRPAPEGAQALRAAAQAAADGGTGGCGRRRGTGRRGF*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0041	persistent	direct	high	1214	0.999	GCA_001047275.1_01862
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1798312	1804392	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	25399	31479	GCA_001047275_1_1_1768	GCA_001047275_1_1_1768	+	2173235	.	PDB:2AR0_B	Type-I-restriction-enzyme	MRQFADRTKQEEAGRFFSGPADGNTPHAEELARGTEKQPDVSGIPSEDGAEFLDTGVMPDGLARQYADMAAKYRAKPSEAVGIDPDDGAVSAAAALAADSGAAVPSAVSDDMEARSVADDAPSGRSADADRGGVPSAYGNVRPGGAPRGAASVAPGGSAAAASGGIARVSPLPAGQYFDGLDTRGRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIEADYQAASEAKQGYLPPPVRMADAVPVPKKGFSVPADALDKESRRRFDALPEGVRRHAQTVADYTADGIMRREAGMADMRGHYPEGLAESAGAVRAYRAEHPESADVLDRLNRAVYGYRRNNGWSVPLLSREGERLQGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVRQDVRQGLTQGGRGLTPDAGADANAAALQGLPGSAAVASGNAPARRQNLQVRARAEGAAPGLSASENLAGTDGGKRAPVAGKRPDTVLPVLNPQVAASAGRVSPKKRMADAAADRRRPEKAGVPLGGGEYRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNSDGLVSDGRRYLKGREAETLRAGGLSEAVPSEPGRDYRPTQEARAPARVMARPRDAAADGKPAGRAQPARAKDTPVAGKAAAAKNAATEKPSSDKVRNIESGKSHFDGGKGKSAAAQGAATEKPSSDKAAKPETFAKTASDNPEEARRKARVLQGGPVYTVKERQAPQGFKALREHAENIKKRLAESIGGLAERVDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAENLTPERAVWAAWHELGHRGFAADGFAKYREELERADGNGLIRRIADAVQEGREGTGDAAASVRSAAVEEAVAELYAAQRTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVLQRLAGKAGGAMSDADVFAMLADLHGNVEGARDAPWDGNHRAVMFARAEDGAAERSKSESLEKLRRAETIRISGREVPEGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRSGITEILRHDYKDAEHLQSIAAIPQIIENAVYIDTLPNEDLAKNGDIQGYEYYVSGLNVGGADYTVRAAVAVSRNGNRYYDHKLTKIEKGNLLSLLDRVSTTGASESKSPLSGIDDKRLLQILQDKDAGKGGIADFDTEAVRFSRAANIGAAISRITGKKSDLRNALKDRWDASKGIQLQFLGRRQIEDIYGGVLDGLKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAKALADLMHDATLAKVDADPLMRKDARGRLDGIRTALDIADGKIAKARAAVASAGARTARADAAYNKAQRAADKAAYALEKAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGADAAAESRAKTDAVRMLEQARADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVYRKARDDYRAHFGQVRDALAERLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLVVVKDADGNSANVSRAETLSEAEKLRDALKADFGPGFKVSPVMKSRDYIRSRDAVGSGFMKELGEAVGRMDLDPAQRARLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAYAQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHEAVMNPNPSKLAQALTGFGFLWMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAARELLRASKQIGLRFGEKFNTIEDSLNGDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLAGSAWQKVMDKAAWLFHHAEKFNRQVTFVAAYRLAKRAGADSEAAFEQAKKATYDGHFDYAAQNRPRFMMGNAAKVVFLFKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHAMASGILGLPFVSTLLAVASMLGSDDDDPWDAEAALRNMLADTFGDKAGEVLAKGFSRLTPLDVSGRLGLDQLVFPDIQDGLEGKKWAESLVVGSTGAVVGAGIGAADGVRTRSSVPRTANTLSLMKSW*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0042	persistent	direct	high	6080	1.0	GCA_001047275.1_01863
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1804485	1804997	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	31572	32084	GCA_001047275_1_1_1769	GCA_001047275_1_1_1769	+	2173235	.	.	hypothetical protein	METADGSDNSLFGDFSDEDVKKGVEKLIQEKLAGYEADMKRQEAAKAHYREIYTAHPDADSIVESRELEEWLAGQNPLVRKAFNDALKDGTAAEVIGAFDMFKAAKSAAEPEKPAEKPPAGKNTPNTLSDIPAGRDHTASDGPPDYLSGNALAEKLASMTEEQVEKFLNS*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0043	persistent	direct	high	513	1.0	GCA_001047275.1_01864
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1805018	1806313	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	32105	33400	GCA_001047275_1_1_1770	GCA_001047275_1_1_1770	+	2173235	.	PFAM:PF13252.5	Major-Capsid-Protein	MAQKTNTAYGDPQAMMRQAAGLFAMHMQRNSTLNRLAGKMPAGTAGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMSLSEAGLRVNQARFPVDGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGARGFHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVGQDGGELKIASTDLFTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQLQASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESGLKIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGTIRGVAKTRFAVDVGGGAKEITDYGVTVVDTVVPLHGGIR*	hallmark_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0044	persistent	direct	high	1295	0.999	GCA_001047275.1_01865
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1806368	1806841	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	33455	33928	GCA_001047275_1_1_1771	GCA_001047275_1_1_1771	+	2173235	.	.	hypothetical protein	MAEIYVRNNGGNRFGGVPYGNLAAEHYRIVAKQDGAILGADAYGPPKDGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDAHVPQDAAYFASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAENKKAADIDILIYGEKFGQL*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0045	persistent	direct	high	473	0.998	GCA_001047275.1_01866
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1806847	1807332	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	33934	34419	GCA_001047275_1_1_1772	GCA_001047275_1_1_1772	+	2173235	.	.	hypothetical protein	MKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDRIYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASELERETAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIAQ*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0046	persistent	direct	moderate	407	0.837	GCA_001047275.1_01867
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1807329	1808003	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	34416	35090	GCA_001047275_1_1_1773	GCA_001047275_1_1_1773	+	2173235	.	PFAM:PF07030.11	head-to-tail-adaptor	MNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGRLLHSDDAFVTDVEKGRPLYAYAAGGFAAGYAYEIDSIRFVSDGKPVCLKLVSPEAADVCAPGWRDGAQTGLPVYAVQGDGKLTLAPAPDRDGRLFAGGYCLPRDMAGDGDEPEINSIHHRNLVYWALAEAFSIPDAETFDPQRSESARRRFELYFGLPADSDLRRITREDAPHLNRHFWI*	hallmark_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0047	persistent	direct	high	674	0.999	GCA_001047275.1_01868
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1808006	1808155	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	35093	35242	GCA_001047275_1_1_1774	GCA_001047275_1_1_1774	+	2173235	.	.	hypothetical protein	MSAEEFCRKQIAYWLNESRKASDNADLKAFEFAGREPADYREMLKRYAA*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0048	persistent	direct	high	149	0.993	GCA_001047275.1_01869
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1808192	1809037	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	35279	36124	GCA_001047275_1_1_1775	GCA_001047275_1_1_1775	-	2173235	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYTPTASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGYQITPKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVESVEDLPAGKLPEAVAYVHALTLHTGLTGEVLDAPPKAEPKLPIDGNSLADIAAMVYYGTWMIESGKDISAPLKQLGCRQAVTMWTVWHETRSILKRSAAALEVLRGYADKDASDRIAACLEGIYGKATVR*	common_virus_hmm	common_virus	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0049	persistent	direct	high	845	0.999	GCA_001047275.1_01870
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1809197	1809364	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	36284	36451	GCA_001047275_1_1_1776	GCA_001047275_1_1_1776	-	2173235	.	.	hypothetical protein	MVNEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNLDFSQWVKSIIKEKIKK*	.	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0050	persistent	direct	high	167	0.994	GCA_001047275.1_01871
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	CDS	1810323	1810625	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	37410	37712	GCA_001047275_1_1_1777	GCA_001047275_1_1_1777	-	2173235	.	PF17274.2	Family of unknown function (DUF5339)	MKTVPTILTGILLATALPASAHGMHKSKPLAMDELPPICQQYFKRAETCYNKAGNKADFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRNLNCE*	hhsuite_tools	hypothetical_protein	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_CDS_0051	persistent	direct	high	302	0.997	GCA_001047275.1_01872
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2117485	2118153	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	1	669	GCA_001047275_1_1_2081	GCA_001047275_1_1_2081	-	2173235	.	pfam01596	O-methyltransferase. Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.	MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKAGHHRMGKMAIAREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTARQVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLVRQGGIIAIDNILLNGRVMREAAFDAPPSVKILKDFNQNLPNDTRIVPITLPVGDGLTLLLKK*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0001	persistent	direct	high	668	0.999	GCA_001047275.1_02195
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2118164	2118349	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	680	865	GCA_001047275_1_1_2082	GCA_001047275_1_1_2082	-	2173235	.	pfam11943	Protein of unknown function (DUF3460). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 70 amino acids in length. This protein has a conserved WDK sequence motif.	MYHYQSEATQFLNRLIEEKPELAQERLKNRGLLWDVELNPEEQKNFESAKVAKKPYTYYQD*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0002	persistent	direct	high	185	0.995	GCA_001047275.1_02196
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2118493	2120469	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	1009	2985	GCA_001047275_1_1_2083	GCA_001047275_1_1_2083	+	2173235	.	COG0323	DNA mismatch repair ATPase MutL [Replication, recombination and repair]. 	MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSENDSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLRGQ*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0003	persistent	direct	high	1976	0.999	GCA_001047275.1_02197
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2120564	2122687	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	3080	5203	GCA_001047275_1_1_2084	GCA_001047275_1_1_2084	+	2173235	.	PDB:1XXI_H	DNA-polymerase-III	MTYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEADAAQTPVQTASAAAMPSEGKTAGPVSHQENNDVPPWEDAPDKTETAAGTARTSAKSIQTASEAETPPENQVSKNKAADNETEASLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGFPDNDCPPEDGVEIPPPDWANVLPADTAGGGTDEEAEAGGIGGNNTPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYRSDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPESLELAANRP*	common_virus_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0004	persistent	direct	high	2123	1.0	GCA_001047275.1_02198
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2122768	2123103	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	5284	5619	GCA_001047275_1_1_2085	GCA_001047275_1_1_2085	+	2173235	.	COG0718	Conserved DNA-binding protein YbaB (function unknown) [General function prediction only]. 	MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKITMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQDLPPGVGDFFR*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0005	persistent	direct	high	335	0.997	GCA_001047275.1_02200
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2123756	2124802	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	6272	7318	GCA_001047275_1_1_2086	GCA_001047275_1_1_2086	-	2173235	.	PDB:3HR8_A	Protein-rec	MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEIDAKIRALNGVEMHITEGTQDETDGERPEE*	common_virus_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0006	persistent	direct	high	1046	0.999	GCA_001047275.1_02201
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2125002	2125766	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	7518	8282	GCA_001047275_1_1_2087	GCA_001047275_1_1_2087	+	2173235	.	PRK02412	type I 3-dehydroquinate dehydratase. 	MHTSLTVKNTVIGSGRTKIAVPLVARDAADLSSVLSQIKNLPFDIVEFRADFLECAGSIGEVLRHTQAVRDALPDKPLLFTFRRHCEGGSFPCSDDYYFELLDALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLKQMEDCGADICKIAVMPQSSEDVLTLLSATLEAKRLVAKPVITMSMGQTGAVSRLAGQVFGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0007	persistent	direct	high	764	0.999	GCA_001047275.1_02202
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2125786	2127801	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	8302	10317	GCA_001047275_1_1_2088	GCA_001047275_1_1_2088	+	2173235	.	PDB:1UAA_B	Replicase	MMKLNAQQLEAVRYLGGPLFVLAGAGSGKTGVITQKIKHLIVNVGYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNVWEQQTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTRYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQNEEALATLNNTNRQHLQAFMDMFGNYRAKAEIDEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGELVSWFARKGERDGKNVIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRFIDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRIDNLKKSGPAD*	common_virus_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0008	persistent	direct	high	2015	1.0	GCA_001047275.1_02203
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2127871	2128929	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	10387	11445	GCA_001047275_1_1_2089	GCA_001047275_1_1_2089	-	2173235	.	PRK02406	DNA polymerase IV; Validated	MSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYDARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSPDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLIGIGVGRLVPKNQQQDLWA*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0009	persistent	direct	high	1058	0.999	GCA_001047275.1_02204
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2129241	2129537	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	11757	12053	GCA_001047275_1_1_2090	GCA_001047275_1_1_2090	+	2173235	.	.	hypothetical protein	MNKNIIYIFSLLITIVIFFIFEKNVISKISFDYNKKEFLISDITNFNWDHVKLYIINSDFQKIVFYDKGKIVFEELIELDRKGKVLPQYLFDSYLKNV*	.	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0010	persistent	direct	high	296	0.997	GCA_001047275.1_02205
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2129829	2130608	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	12345	13124	GCA_001047275_1_1_2091	GCA_001047275_1_1_2091	+	2173235	.	cd06195	Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0011	persistent	direct	high	779	0.999	GCA_001047275.1_02206
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2130817	2131887	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	13333	14403	GCA_001047275_1_1_2092	GCA_001047275_1_1_2092	+	2173235	.	PDB:1Z19_B	Integrase	MAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINIPACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTSKPKPQPHIRPDELPDFYRALQTAHDLHPYARPLLLLAALTVPRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVPLSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTDSATSSPTSA*	common_virus_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0012	persistent	direct	high	1070	0.999	GCA_001047275.1_02207
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2132116	2132379	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	14632	14895	GCA_001047275_1_1_2093	GCA_001047275_1_1_2093	+	2173235	.	.	hypothetical protein	MADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKIIADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA*	.	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0013	persistent	direct	high	263	0.996	GCA_001047275.1_02209
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2132722	2133375	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	15238	15891	GCA_001047275_1_1_2094	GCA_001047275_1_1_2094	+	2173235	.	COG3676	Transposase and inactivated derivatives  [Mobilome: prophages, transposons]. 	MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFYRKIRTVANHRLALAADEVFEGPAGPGASCFGGRRKGRRGRGAAGKAVVFGIPKRNGRAYTVAADDAEPETLLPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRRNHINGIGSFWNQAKRALRKYNGIDRKPFPPFLRECEFRLNFGTPSRQLKILRDRCGI*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0014	persistent	direct	high	653	0.998	GCA_001047275.1_02211
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2133403	2133642	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	15919	16158	GCA_001047275_1_1_2095	GCA_001047275_1_1_2095	+	2173235	.	PFAM:PF10078.8	transcriptional-repressor	MRNKINRNDMELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPDTETRRADMPLEKWRQFLDWIEKTNAV*	phrogs_hmm	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0015	persistent	direct	high	239	0.996	GCA_001047275.1_02212
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2134338	2134664	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	16854	17180	GCA_001047275_1_1_2096	GCA_001047275_1_1_2096	+	2173235	.	PDB:5IW9_B	Baseplate-wedge-protein	MTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDLIDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGERTYRIK*	hallmark_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0016	persistent	direct	high	326	0.997	GCA_001047275.1_02214
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2134685	2135740	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	17201	18256	GCA_001047275_1_1_2097	GCA_001047275_1_1_2097	+	2173235	.	CDD:PHA02568	baseplate-assembly-protein	MGNSRLSQLPAPAAIEETDFEGIFARKKAALTALCPESIRETVAQTLELESEPLTIDLQQQAYQELLVRNRINEAVKANLLAYAQGSDLDHIAAQYGLSRKTIRAADPDANPPVAAEYETDDAFRARVQAHPEKYAAGPRTAYEAHAIDAHPQITHARAVRRAAGTVEVYIKTQSGTPDETILTAAREYLSAETRRPLCDNVQVTAAQPKDAAVEYSAEYHPAANIQAERQTACEALDNLWRQNAHIGASVALSKIIGALDTPGVKKNHTAQPRRRHRMRQRRIHPNHVHARARINEQHRPREQQPPATRTGKADRTRNCRRLPPTRPRIFTLSRLRKKHRHGRGLGLCRN*	hallmark_hmm	common_virus	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0017	shell	direct	high	1055	0.999	GCA_001047275.1_02215
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2136159	2136461	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	18675	18977	GCA_001047275_1_1_2098	GCA_001047275_1_1_2098	+	2173235	.	PFAM:PF07484.11	tail-fiber-protein	MANATEQNQFDQAVRLIEPGDSVVVGPGAPVNQPLQALANRTLLLKNQTEALQTASDTKAAPSHWARPGKSPQQAKTPSQKTATPTPSTPHAPTAPASSD*	phrogs_hmm	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0018	shell	direct	high	302	0.997	GCA_001047275.1_02216
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2136458	2137207	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	18974	19723	GCA_001047275_1_1_2099	GCA_001047275_1_1_2099	-	2173235	.	.	hypothetical protein	MCKDRAVGFEIACGVSDGFGKGHDRAGGDAFRIEFFPRAPVVVCAAGLVAFVHVGRVGGIAQLPAPAGLRAGDDLDMAGGVFNGQVRAADRRRQGIDAVGFEAVQIAPECFDFEVADAVAGQRVRFAFDVFVETRFVGFVEDVVVVVGNAVICAVQAQGVVAEDDVGVFVIRADIGFVAAVSVRRVGGQPDAALELCFGGKGFLAGNGLVVGEGDFEVGGRGGGAGLVDRGFDGFGGGGGVFGFANGIV*	.	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0019	cloud	direct	moderate	522	0.696	GCA_001047275.1_02217
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2137660	2138346	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	20176	20862	GCA_001047275_1_1_2100	GCA_001047275_1_1_2100	+	2173235	.	PFAM:PF07484.11	tail-fiber-protein	MATGGAENRPKALVLKLCIKAADTLGEAVFRIKSHGETANAGALDASRLAQGLQEKADRDHTHTTAQIQGLDEKISAAVAAQFTRQTIGGVDIVRFPDGTMIQTGSYRFARGGSPIGNEVVFPIAFADGNVKCFVSERHSGRVNGERQHNWLFIRAKNHAAAIITNWYESSCDWMAIGKSASGNAASPTPIVPEIPEIDEEPQRESGRSSTGLRNPRRHRGLDFPVGS*	phrogs_hmm	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0020	persistent	direct	high	687	1.0	GCA_001047275.1_02218
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2138803	2139114	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	21319	21630	GCA_001047275_1_1_2101	GCA_001047275_1_1_2101	-	2173235	.	TIGR02607	addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other]	MKMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQSSITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMKTGART*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0021	persistent	direct	high	311	0.997	GCA_001047275.1_02220
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2139486	2139923	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	22002	22439	GCA_001047275_1_1_2102	GCA_001047275_1_1_2102	+	2173235	.	PFAM:PF02413.16	tail-fiber-assembly-protein	MTIYFKNGFYDDTLGSVPEGAVAVGGEEYAALFAGQAQGGQIAADSDGRPVLTPPRPSEYHEWDGKKWKISKAAARFANSRFAKQKTALAFSLAEKADELKTASWRAIPKWKSTAFTGRKKKPSRGRRTTTPRPRCWRKSPPQGA*	phrogs_hmm	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0022	persistent	direct	high	437	0.998	GCA_001047275.1_02221
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2140078	2140245	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	22594	22761	GCA_001047275_1_1_2103	GCA_001047275_1_1_2103	+	2173235	.	.	hypothetical protein	MGAKRRLREYIYHLLVAIDQLFNAITGGAADETLSSRTYRGARLAQQPKTRWKIL*	.	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0023	persistent	direct	high	167	0.994	GCA_001047275.1_02222
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2140250	2140507	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	22766	23023	GCA_001047275_1_1_2104	GCA_001047275_1_1_2104	-	2173235	.	.	hypothetical protein	MPSECGAAAILPRIPFIGGAALVEPRVVLPAFQLADIRLPAVVAVEKYAVDQGIYSGLTKTGTALPRLAVLFVLSAASSPCPDFC*	.	hypothetical_protein	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0024	.	unmatched_CDS	none	0	0	.
GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote	cenote	CDS	2140561	2140944	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C142	23077	23460	GCA_001047275_1_1_2105	GCA_001047275_1_1_2105	-	2173235	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MIYYPAVLFQDPDQSNWGVIIPDLPGCYPVGDTVADALADAKAAAMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQHILNRVDACTAARHETRAVFWRKPP*	mmseqs_cdd	nonviral_gene	C142	23460	2117485	2140945	GCA_001047275.1|CP012028.1@region_2117486_2140945@tool_cenote_CDS_0025	persistent	direct	high	383	0.997	GCA_001047275.1_02223
GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote	cenote	tRNA	233463	233544	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C18	41803	41884	tRNA-Leu	tRNA-Leu	-	2173235	.	tRNAscan-SE score: 61.4	Leu	NA	tRNAscan-SE	.	C18	52599	191661	244260	GCA_001047275.1|CP012028.1@region_191662_244260@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote	cenote	tRNA	643800	643875	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C38	3743	3818	tRNA-Glu	tRNA-Glu	+	2173235	.	tRNAscan-SE score: 54.8	Glu	NA	tRNAscan-SE	.	C38	20903	640058	660961	GCA_001047275.1|CP012028.1@region_640059_660961@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	tRNA	1775119	1775209	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	2206	2296	tRNA-Ser	tRNA-Ser	+	2173235	.	tRNAscan-SE score: 70.3	Ser	NA	tRNAscan-SE	.	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote	cenote	tRNA	1775287	1775373	GCA_001047275.1	CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275.1_CP012028.1	GCA_001047275.1|CP012028.1	GCA_001047275_1_1	GCA_001047275_1_1@C118	2374	2460	tRNA-Ser	tRNA-Ser	+	2173235	.	tRNAscan-SE score: 71.6	Ser	NA	tRNAscan-SE	.	C118	37712	1772914	1810626	GCA_001047275.1|CP012028.1@region_1772915_1810626@tool_cenote_tRNA_0002	.	.	.	.	.	.