core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	40615	41238	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	1	624	GCA_001053535_1_15_41	GCA_001053535_1_15_41	-	106915	.	PRK11630	threonylcarbamoyl-AMP synthase. 	MSQFFYIHPENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYATVSNSAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGLRVPDNQIALDLLKALGEPILSCSLMLPDNEHMTYSDPEEIRECLERQVDLIIHGGYLGQEPTTVVDLTEESPVILREGSGSTDPFI*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0001	persistent	direct	high	623	0.998	GCA_001053535.1_00587
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	41488	42246	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	874	1632	GCA_001053535_1_15_42	GCA_001053535_1_15_42	-	106915	.	.	hypothetical protein	MEQTNPSDNINKGFAYNVAKDIANLEMAVESLKDAPKPSAELAQPQPDVIPEGLEVIKFEVPKLFEQHVLNKLRESGKEVRLKIELPESFKNSTCLYVAEGSYPKLIDVGQEYSEVTGGEVRRCTLIKLMSTSNVKSTNATPIIDDNYALAQKIAESKVNEGLFVKWLAKYVTETYLADKQKENQYLYVRNDPSDVDDFIRAPYYNVYQYQAIDYDINDLQNDLRDKKAKLESGEIDPSTAKDFVIPAYPQV*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0002	cloud	direct	high	758	0.999	GCA_001053535.1_00588
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	42227	42406	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	1613	1792	GCA_001053535_1_15_43	GCA_001053535_1_15_43	-	106915	.	.	hypothetical protein	MNKFGYLKAYKVKVLPIKYLIMKGETTHQDNGKETNLDEQLNEIYQQTKAEVKNGTNES*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0003	cloud	direct	high	179	0.994	GCA_001053535.1_00589
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	42399	42746	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	1785	2132	GCA_001053535_1_15_44	GCA_001053535_1_15_44	-	106915	.	.	hypothetical protein	MEQINLEMVRGDDDGFVFEVVEDTEQQSAVDFTECRLDLHIKPKRGEVIKLSSTTGEIVVENNLIIVNVPHGKTESVKWESAPYDLQCIDKNGKVRTLVGGEFVLIIDVTVVENE*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0004	cloud	direct	high	347	0.997	GCA_001053535.1_00590
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	42800	43135	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	2186	2521	GCA_001053535_1_15_45	GCA_001053535_1_15_45	-	106915	.	.	hypothetical protein	MKFIEKQVEDNYTGATCSCHVPTVINIDYANKTTAVVVASYVSSKMNADGKSQLSSNTFTFQGVPPYSAIPYDWVLSQLTEKQPEDFEPEEYSNFINPYLFAGGKIKELAA*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0005	cloud	direct	high	335	0.997	GCA_001053535.1_00591
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	43152	44021	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	2538	3407	GCA_001053535_1_15_46	GCA_001053535_1_15_46	-	106915	.	.	hypothetical protein	MSYGIFSDTLPLFVGEEQVLVFEKMLSYNAISDRFKTKSPAARYYKEIKISPPWEYPFVFVDHSYIPSIYGGWTGGGTGNGGGINISDVVFFGTYTDSQVVYRPDGWYLIVFKPDGDNSSYNANYYVFKSLDQVTNKRQEPYGVNIYSTSGKLLYHSGWGIVRLNTAINVTAEIFRGQPRGPNGRGTLCLGLGDGNLPRDILAIEGKKINVGPNKLVSVGYVRKFTRFMRRTGYDPSAAYSTAVISGGFLFESISYATPGINTDFEPRMYAENVGAVLNPIMIIEKPKV*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0006	cloud	direct	high	869	0.999	GCA_001053535.1_00592
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	44018	44389	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	3404	3775	GCA_001053535_1_15_47	GCA_001053535_1_15_47	-	106915	.	.	hypothetical protein	MSYGLWIDGKNDNSDVAMLVKIIPTPVGSAGEYVAPELPLDVRDKYRQFFTLLYSDTQYGKSDFLSPGNQGEIDIVVARADVLPVKGRENAPRVQWQTARNVSDVWCYEASVVAILLWREKVA*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0007	cloud	direct	high	371	0.997	GCA_001053535.1_00593
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	44386	47760	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	3772	7146	GCA_001053535_1_15_48	GCA_001053535_1_15_48	-	106915	.	PFAM:PF13550.5	tail-protein	MCGFFIGVNMGGKKGGVGGHTPVEAPDSLLSSQRLSAIGIISLGPIKGPVNKWKSTYLDNTPIQNASGKDDNDVDSFNFTNMEIQYTLGTQDQLPMTGFDSSQREVPIGIEVKKELPITRSIIDPDVDRLRVTIGVNALFSQNDQGDTNGASVEFEILINGNLYKSYSINGKSSSRFYRSYIIDELPPKPFNVTVRRVTADSKSQRLQNAIVWSSYTEIIDAKLSYPNIAMIGIKTDSRHTPNFPNVNSLLDGRIISVPSTYDPETRTYAPGIWRGDFKKAWTENPAWIFYDLATNPDVGIGKRISEYGLNKFQLYQIAQYCDELVPDGYGGKEPRMTAGIWITEQRSAYEVLNDMSSVFRAIVAWNGMQMLAIQDRPTDPVCTYSQANVIDGKFARQYVPLKSIYTAVEVEYADKNNMYQKAIEYVVDDEMVARYGYNVKKITAFACTSRGQARRYGKWVLVTSKLEQCTITFTVGREGLHHLPGDIIEVADNSWAKTNLGGRVIAINRSAVELDRKIKIEGDSYLSYVVRDNNGQRTERVKILSVAGNVVNLESVPENLNPDDNWALQTPLVRTELYRAIGISENDGNYTITALQHEPQKQAIVDNSASFESRNTTLHQAGVSAVSDAEVNADGSGISLSFKPPANFVGQGLKYQVKLYRNSNLFNVYDDLDQPSIAFSDLPDGDYIAEIRAKNLAGQLSEPITKSFSINFDIKELVTVSKVMGIDLNWRNPIFANTNAAIEIWVSQDDNFQHARKLVTLAYPTNSYSYTGLGAAETYYFWARMVSKDVAGKFTDAVEGVTERDATKIVDYIHGQINKSALTQELINEISGKSEAAEAAKDIAERAIAQIQQEAVTRGTQISELKTVDEQQAQRITTATAKAESALSGITAEQKARADGDKAEAQARQALAGRVANAEGSIANIRTAKADKSEVASIAQQSLRATWQADAQAKADKAKTDAVAQSKAEIDVVSRTVAGVNNKLSATHTIKTQVVGGGRTAIAGIALGASSDGKTAESSVIVMADKFGVVKNAADGTVQNVFTIADGNTALSGNIAVKGDVLGSRFIGGEIDISGKDGVLKVGRTGSFLMRASNQNRGLVMNNDQIIVYDERGVVRVKIGRLL*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0008	cloud	direct	high	3374	1.0	GCA_001053535.1_00594
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	47775	48440	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	7161	7826	GCA_001053535_1_15_49	GCA_001053535_1_15_49	-	106915	.	PFAM:PF06805.11	tail-assembly-protein-I	MVQVKFYGDLKRFVHEPVELEVDSFSELMSGLLTQIKGLREHLKKGCYKVRIGKNTYLEESQVKADIDFKADCTIHFTPVIAGAGKGVGIGQIIVGVVLIAASWYAGGAAGWSYLGAQGFAGATMAFTVGASLIVSGAISLLTPTPSMGDQKIKEGEKNQSTSFSNLKNLTPQGRPIPLLYGRMMTSLVLVSQGAEAYDDAPESDNTQTGGTGKRRKLKRN*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0009	cloud	direct	high	665	0.998	GCA_001053535.1_00595
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	48386	49144	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	7772	8530	GCA_001053535_1_15_50	GCA_001053535_1_15_50	-	106915	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MIDFELKQAILAHATRCHPQESCGFVLSVRGDLYYYPCTNVASDPVNFFEIAPEEFIRAEEQGEIVVLVHSHPDSDYMFGLPYLSASDRACQVRLGLDFWLVVDGDIKCFRNVPPLIGRQFENNKQDCRNIVLDSYMLAGIDLPDNSKYPFEWFETENLYEDGLLRCGFYRVMHEADIQIGDVVLIQVGSKVANHAGVYLGNQMMLHHSQDRLSARVPYDGFWLNNTHSVWRHKEWYKLNFTAILNDLCMSR*	mmseqs_cdd	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0010	cloud	direct	high	758	0.999	GCA_001053535.1_00596
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	49146	49880	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	8532	9266	GCA_001053535_1_15_51	GCA_001053535_1_15_51	-	106915	.	PFAM:PF05100.11	minor-tail-protein-	MPKDTPNKMLSELSKLEQGALIELWEIDLSKIPSNSSPDKKGEIYRFHNGLTQGGKNLIWQGNEYVAYPINAEGFELSSSGPSNRPTLTLSNLYGLVTGIVADFGHGIGGKVVRRQVYAKFLDSVNFDGGNPNADPMQEAVSLYVIEQLKSLDDVTATFELALPIETDGARIPLLMITSDTCIWQYRSSQCGYTGGPVADEYDKPTTDPKKDKCSHCLRGCKLRWGKNAVLPFGGFPSTTQFGN*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0011	cloud	direct	high	734	0.999	GCA_001053535.1_00597
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	49880	50212	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	9266	9598	GCA_001053535_1_15_52	GCA_001053535_1_15_52	-	106915	.	PFAM:PF05939.12	minor-tail-protein	MALRKINFCPKPGYTVESEPRRKVNKFGDGYEQRMVDGLNPLLRKFSLTYKLNHKSAVELDRFFMEHSGVTPFLFKEYEGGALIKAVCPKWSKTVDKKYTEISCTFEEVM*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0012	cloud	direct	high	332	0.997	GCA_001053535.1_00598
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	50222	53515	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	9608	12901	GCA_001053535_1_15_53	GCA_001053535_1_15_53	-	106915	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MASTVSDLLVRLGVDDAKFRSGLNVAEARAKSFSIRTTQYLKNIENAANSIEKINYRLFNFSVASVGLGTLKNYVDGYTEVKNKLALVESASFSSQRGLQSLFDISLKTNQSLEATSSIYQRFAQNAQALGINQARVASLTETVSKAVAISGASAASAQAALMQFGQSLASGVFRGQEFNSVMEQTPGLAQAIAKGLGVSVGELRNMANAGKLTTDVIIPALERVKGSVDEQFNTRVVTISMAFENLRTSTTKWIGELDQATGASQGFATVISGMADHLTVATSALGGFAAVLSINKLRAFIAAGNEQAALAINVARAENVKTAALREQAQAEMSLIQIKLTHTRTESELLAIQQQAEVQSRKLTAAIMAESNARRNLDLVTKRATAGGRLFSNALGFVGGPIGLVTIGLTAAAGALIEYRQKTEQAKQESLAFADSLDITSDSLRTVTADMLSSMRTKLERSIETQKAVITELKAETNKLEQQVKIQIDGMNSQGLQNNQHAIERYKKLIGDLSIKKGELAEANEKLEKSERDLLTIDSGKSIAEFNTKLKELLPTVDLSKINIDKLGLSVEDFNRLVPNAESGANSISSTVQRMGAMALIVASNFDALGLSVKNALSDKAQKIIDRNNRQIAINREKDPKKKRRLEAEDQAINSGFDPNSTDFSAVADSFYNALGSKKTKGSGGKSERARDSWLNFYDEIRKKSTSSLNEINLEQDQMMRRLNEHLKKGVVSHQEYEIAKTAITERFEKQRLELSGKYAPNKLLKSELKDELTAIQELYAAGQLTKGESDNAQLKAKFEYAQQVSQNAVSPQDQVLAIYDPTQELKNKQAQELAQLQAFNEQKLITEEEFQRRRQEIIDKYKNDEFQRDIANYATGLNDLGSAFDGLASMVEQSAGKQSAAYKAMFAISKAFAIAEATVKLSQAIAQAMADPSALTPAQKFANMAAVASAGVNLISQITSVAAFATGGHVQGPGTGTSDSIPAWLSNNEFVMTSRTVDHYGLAFMNALNQRRLPRFANGGRVGGGGSPSYPGISSNGGEGDHNEISITINIAKDGKEDVTVEQQIAQSKALSDAITVKVLEVMRKQRGRDGGLLN*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0013	cloud	direct	high	3293	1.0	GCA_001053535.1_00599
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	53578	53787	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	12964	13173	GCA_001053535_1_15_54	GCA_001053535_1_15_54	-	106915	.	.	hypothetical protein	MTVRFISFIVKILLFLTVCLTPLFLFTKPWGVYVFCVVMITLIAWCLRIIFDSKLTKQQKIDRLFGNTY*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0014	cloud	direct	high	209	0.995	GCA_001053535.1_00600
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	53877	54764	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	13263	14150	GCA_001053535_1_15_55	GCA_001053535_1_15_55	-	106915	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANQISTQTISFNNQSLITVEQNGNHYVAMKPICENIGLAWEPQVLRIKRDEVLSQGMIVMIIPTNGGNQNMICLPIEYLNGWLFGIDINRCKPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLIHQRFNVESIEDLTFEQLPKAVEYVHRIVLEGELITTPKKDECFNFEFTEHELQQLVWAWFALLRGTELCQILHPALKKIGSHYAASVYGVAYEYRSTLRQEHNVLTRITEQFECEQGNNWRVLKHLRTYNPKATGFQLDIL*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0015	cloud	direct	high	887	0.999	GCA_001053535.1_00601
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	55069	55536	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	14455	14922	GCA_001053535_1_15_56	GCA_001053535_1_15_56	-	106915	.	PF13957.6	Toxin YafO, type II toxin-antitoxin system	MRITLNADLVHFPHINKIAQGLAIFEMSGQQVYPEFLGHYGDLNNSSAARDSQLRKLHIALSKTDFELRTWQNCRGFNRTCDNFLIYVKHYMYDDYFQILDIVTPDAHKNIDKFIAVLVEKAEAFYQLNREQLDKLPFYSCKLKLLDEHLHLDKK*	hhsuite_tools	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0016	cloud	direct	high	467	0.998	GCA_001053535.1_00603
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	55520	56050	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	14906	15436	GCA_001053535_1_15_57	GCA_001053535_1_15_57	-	106915	.	.	hypothetical protein	MKKLRNFVKKTVATTLLTGLLGSGSATANAPWQSVQDDAGCVHQLVKSDAKADDVFVALVKLSHSVEKTTGALKAVKFKLKDSKFNTLLMLRQLLDFTSSLLISKYEQEIFFKYRTQYRAYSNAVAQLDLAIFKIRERRGLVKVAQFADLNLTQAEYDDISEAAKLRSEYYNANHA*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0017	cloud	direct	high	530	0.998	GCA_001053535.1_00604
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	56382	56765	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	15768	16151	GCA_001053535_1_15_58	GCA_001053535_1_15_58	-	106915	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MRNLRYFKILTFSGYVSQNSRTATEILSQGVRIIRMPSNGGEQEAVCLPLHYLNGWLFGVKPSKVKPEIKAKLIEYQKECYEVLWDYWTLGVAKWKDIRQQREILEENEAESQKRGSEAGRAYSVER*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0018	cloud	direct	high	383	0.997	GCA_001053535.1_00605
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	56847	57716	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	16233	17102	GCA_001053535_1_15_59	GCA_001053535_1_15_59	-	106915	.	PFAM:PF00145.16	DNA-methyltransferase	MTTKQPNKQTKRIMFKQAPLPFVGQKRMFLKHFEEVLNANIKNDGEGWTIIDTFGGSGLLSHVAKQLKPKARVIYNDFDGYAERLSHIDDINALRAQLYAVVGNATQKNKRLTKECKAECVKIIQNFKGYIDLNCLASWLLFSGQQVATLDDLFQNDFWHCVRQSDYPKADGYLEGLEITHESFHTLLPKFSSDPKALFVLDPPYLCTRQESYKQATYFDLIDFLRLINITRPPYIFFSSTKSEFVRFIEYMVEDKVDNWEAFYNSERVVVKASASYSGKYEDNMVYKF*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0019	shell	direct	high	869	0.999	GCA_001053535.1_00606
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	57726	58376	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	17112	17762	GCA_001053535_1_15_60	GCA_001053535_1_15_60	-	106915	.	PFAM:PF08400.9	minor-tail-protein	MALKDQLTSLIPLIAQDVKGKGGSSVLMQGNGRPDKPETTGGKITGNEPNGTLYHSTDGAGVGANLWQKQYSKWIVISGDTGSRGMSRSSVNVKEGTIYLRRVGNMVECSFTNGRWGTISFYGSGNPKFTRKNHAKRMDILPRQKIPLGFQATVPIMLPFYSDDGENIASVYVAHKGDSNYIELRFNGNVPTADLDHMRMPVITWITNDPFPETLP*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0020	cloud	direct	high	650	0.998	GCA_001053535.1_00607
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	58376	58762	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	17762	18148	GCA_001053535_1_15_61	GCA_001053535_1_15_61	-	106915	.	.	hypothetical protein	MENQNHKKIVDAIKAIGADYKSLHEAISAIQTQQGSGEQATLTKINELISQAETRILNKIKGGELSEDLDTLFEIAAKIGELVSDKSVREALTGTLQEIKNNVANLQSWQTEMDNLDLVGEYNKAKAS*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0021	cloud	direct	high	386	0.997	GCA_001053535.1_00608
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	58770	58901	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	18156	18287	GCA_001053535_1_15_62	GCA_001053535_1_15_62	-	106915	.	.	hypothetical protein	MDDIVAVVDPPQEIVAVVEKGEVIYQSDDDLPDLLTIYELAKI*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0022	cloud	direct	high	131	0.992	GCA_001053535.1_00609
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	58894	59274	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	18280	18660	GCA_001053535_1_15_63	GCA_001053535_1_15_63	-	106915	.	.	hypothetical protein	MDKTTINLYRGDDEECTVRLFEKQPDETLKPLDLSDMARFDLWAKVRSKAVLTLSSTTGEIEVIDAPGGVLKITFNHSLTKDATWSQADYDLQAVSNKGRVKTPIRGGRINLQFDVTPDMTEARNG*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0023	cloud	direct	high	380	0.997	GCA_001053535.1_00610
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	59267	59755	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	18653	19141	GCA_001053535_1_15_64	GCA_001053535_1_15_64	-	106915	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MANRIYLAFYKHKRSFLKEPFKALADAVTRFFTKGKYSHCEIAIERMEFVQGDHYEHVTVFDCYSSSVRDGGVRCKQIDLSDTDKWDLVLLDNVTEAQIKSYFNRTTGAKYDWWGALGIVLGIKQKRSKYFCSEWCFNAIYNSEEGWRFSPNQLAAMVHKNG*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0024	cloud	direct	high	488	0.998	GCA_001053535.1_00611
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	59748	60380	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	19134	19766	GCA_001053535_1_15_65	GCA_001053535_1_15_65	-	106915	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MVNMMLFNLNTNTFAPDYLVTDSQDWIEVSDEEIDGISASITGGGSVWLENGKVKYSGKAPSEFHEFDNVTKQFVLSKTKQAEFTKETQSRLINNIDVHAASIYSTWTRFESEYRERQNAAEAYKAAGYQGECSRYITDFAKRAGLNNQAATDLILGQAAGLEKLQVELANQRMRKYELKVPGLTIEKMQSIHDDIIKQMDALMEAYNNG*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0025	cloud	direct	high	632	0.998	GCA_001053535.1_00612
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	60374	61624	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	19760	21010	GCA_001053535_1_15_66	GCA_001053535_1_15_66	-	106915	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MANLKEQDKWEDGVYQIEENDPVLGGENGITNKPIKQLANRTSWLKKALELLGKKSAPKDLTADSTSTTQDDGHTHALPSASTSAKGVVKLNSSTNSASETEAATPKAVKAALDKANQCVPYSSNIKNYATVVPNDDGYGGYEVAGGKNGNIFRIESAGDHFKFWSSVGNTPYAIHAPAKRNGTMALMDDVNTKVSKSGDAMNGILFIDGAAPGGFANGLVIRNKAGGPNTSGFVDFYQSDTVPRSSIWFRDAGNNSTQIEFLNTPEGANWNRDSREVALTLKSTGALWSKQYGWLHDHFAKQGDINNVWKELNNTYRKNRFRHQYYPNHYQGAEVYDIPVGDNGVMRIIIMRVTINGYAKVNLPEAFNGYCIVQATDVGGGQKRVGANIQNGNVVEIHNSGETGFNILAIGWNGW*	mmseqs_cdd	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0026	cloud	direct	high	1250	0.999	GCA_001053535.1_00613
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	61651	62217	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	21037	21603	GCA_001053535_1_15_67	GCA_001053535_1_15_67	-	106915	.	PFAM:PF09684.9	Tail-protein	MANLTYADVIERETKYKTLADLSLSMNKIDNSKVMTTLVELIDDDFISLLAEKWSVTGYDGAFIAGSDSSKRSLIRIAMELHRYKGTPWSIREVCRRLGFGEIEIDEGLKARAYNHKFVQTIPLSDKWAYYAIRLNQPISNEQAAHLRKVLRNFAPARCTLAVLDYKSVAFLYNNKVRYNGTYNHGSN*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0027	cloud	direct	high	566	0.998	GCA_001053535.1_00614
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	62210	63316	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	21596	22702	GCA_001053535_1_15_68	GCA_001053535_1_15_68	-	106915	.	CDD:COG3948	baseplate-assembly-protein	MNRYEVKVVDDNVESILSEAISQYEKRTGKILQPAHIERLLINVYAMRESLARQGINEAFRQTFPQFATGIALDLCGETFGCYRLLERPARTILRFSINGEHPSVVIPKGTRVSVTDDIEFVTLNDDVITPLISYVEIEAACNKPGTVGNGWERGRIKTLKSEINFAGEITVTNIDIPSGGLLREEDDPYRARILAAPEAFTSCGSIAAYDYHTRAVSQDIADVNVSTPRGGLVRITVLTKTGLPDSRLLNDVKQYVGPERRRPLCDTVEVIAPTKRDYQISATLTLLDGYREDVVKSKARDALQLYLSDKTKKLGVDVVPSAIISALRVEGVYDVNLTEPSKIVVGETEWANCTAININAAPERSNG*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0028	cloud	direct	high	1106	0.999	GCA_001053535.1_00615
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	63313	63678	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	22699	23064	GCA_001053535_1_15_69	GCA_001053535_1_15_69	-	106915	.	CDD:COG3628	baseplate-assembly-protein	MNTQSTLITTHWQLAPNIENQVVQGIDDIHQCIDHILSTMKGTDVLRPEFGSDHFQYIDQPEDIAIPNIVREVTLALQRWEKRINVDSVNVEGTAPHFEFLIFWSLAEDVHREIYATRITG*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0029	cloud	direct	high	365	0.997	GCA_001053535.1_00616
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	63738	64286	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	23124	23672	GCA_001053535_1_15_70	GCA_001053535_1_15_70	-	106915	.	CDD:COG4540	baseplate-assembly-protein	MKTHDFGATYQEGIISAVDAASHKVRCKIPTLEDLETAWLSYLTPNAGGNQFYCLPDVGELVALLLDARGEGGCVLGAIYNEKDTTPANDSNMWVKKFTNGTVISHNRKSGEININTSGSVTVTAGGGVKINADTSISGNLAVSGKITSSTEVSAPKVKQGSIELGTHKHTGDSGGKTSIPE*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0030	cloud	direct	high	548	0.998	GCA_001053535.1_00617
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	64287	65357	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	23673	24743	GCA_001053535_1_15_71	GCA_001053535_1_15_71	-	106915	.	PDB:3CDD_F	tail-protein	MNSNVPTPDFSILYEKTNITADIEPHLIELAYTDNLEGESDELTITFEDISGKWVRQWYPTQGDKLKAAIGYKGTLLADIGAFEIDEVEYNYRPSYIQIKALSTGIGKANRTLKPKAYENTTLKQIVSIIAEKLKLKVVGTIKSIPVKRVTQYQERDVEFLARLAREYHHSFKIVGDQLVFTDKDELGKEEAVAALEERDTISITLRDRIKDTAKEVDVSGYDATGKKVIKKRKKAKPLREKMKQAQAASGDTLKIVTRGETQEQIDARADAALAEQNDDQTAGNITLVGNPKLVAGSTILLRNLGIFSGKYLIKSSRHSITRNGGYITSIEVRMLEFIPDDLLSTGALTENQTGE*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0031	shell	direct	high	1070	0.999	GCA_001053535.1_00618
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	65350	65583	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	24736	24969	GCA_001053535_1_15_72	GCA_001053535_1_15_72	-	106915	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQQTVLKHTVKQGERWDNLAYYYYGNALDFERIINANPHMGLCEVLPTGATVYIPVLNIKPTNNESMPPWLRGNNE*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0032	shell	direct	high	233	0.996	GCA_001053535.1_00619
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	65561	66502	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	24947	25888	GCA_001053535_1_15_73	GCA_001053535_1_15_73	-	106915	.	PFAM:PF06995.10	tail-protein	MYFMLGSVAFEPVDLTDFSETHAADFAEHAVLKGKPRLQAMGEKLTELNFAIRLHHTLGGVERRYQELLGAKSKQAAQPLIIGRGKYKGNFVITDISSVTLFTDKLGNALCREMNISLREFVGDIEENPLGAALNIGGNSLLGSILPAGAVKALSQVKETVQKGAELFNQGRQIIDSVRDTVAVVRQLSDDPAAALAYLPGILKNLDGAIGNFGELTGMRDLLEGVHKVLPAASDLARESAGIYEDLMSMKDSLTLGKQSGGADWNNWFKPADSALDNINERVDNAAAPVAEMTAWVVLRKDEDVIDDTTDRT*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0033	cloud	direct	high	941	0.999	GCA_001053535.1_00620
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	66502	68781	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	25888	28167	GCA_001053535_1_15_74	GCA_001053535_1_15_74	-	106915	.	PFAM:PF10145.8	minor-tail-protein	MSNNLAIGLVITAGVTGAVKGIRSVCNSFKILQDQSLSTSKKMGALAKTGVAGFTALASSVTATMGTIRGLADPAIKFESAMADVKKVVNFDTPAQFKEMGDDILKLTRTIPMAGEELAAIVAAGGQSGVARENLLGYAKDAATMGVAFDMAAGDAGEAMATMANVLGKPITEMAQFGDVINHLSDNANSKAKDIVNVITRAGSDTRMLGLSEKQSAALGSTFLSMGKAPELAAQSVKGMSAAFLQLKAGEHAKELKQLGFTTKSFAAAMNKDAQGAISSFIEKVKQMPDDKQYPLLAKIFGKQYADDVLMLAQNTGEYNRQLGLLQETDEHGKLKYIGSMQREFENRSNTAENKLTKLKNSISELATKIGAAFLPVISSFVENITPVIYSITKWVETNPQIMDWVLTIGGGVAAVVGGLLTLHSAFSFVAAGLLPFIKAGKFLGGFLGKFLFSAISNLSLGLGYLIGYVIKGAMMFGKAILIMSRALLTNPIGLIITGIAVAAYLIYENWSKVGPWFSELWSKVSGVFSNAWNGITNFCSTAWTNISNFFTSGIGNITSTILSWSPLALFQQVFSSVLSWFGIDVPAKFMDFGRNMIDGLVNGIKNAWEEAKKIVSDLGDGIKGWFAEKLGIHSPSRVFKGYGVNVVEGLAIGMDKSTSIAEAASDNLAGAVGLNGVTHNTGVLANYQPLNRADIMPQTTGAANSVVVNFNPTINVNGGSNSDGNGVLNQVQQGLKMSLSEFEMMLKRVLDQQQRRAY*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0034	cloud	direct	high	2279	1.0	GCA_001053535.1_00621
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	68818	69078	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	28204	28464	GCA_001053535_1_15_75	GCA_001053535_1_15_75	+	106915	.	.	hypothetical protein	MTREKWVENTQAVLLLALVLSYLGSLYHFLVFYSESNSLSWISVCVSAFLFALPWILVGFLVMFSCRVIIISLFGLFTTLQTLLKH*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0035	cloud	direct	high	260	0.996	GCA_001053535.1_00622
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	69246	69494	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	28632	28880	GCA_001053535_1_15_76	GCA_001053535_1_15_76	-	106915	.	PFAM:PF10109.8	tail-protein	MSETILKLEFPFPDGQGNTITELKIRRPKVRDIRKMTGKTETEMAVSLLAIVTGLVPEDIDELDIADFQAASKIVEKMQKGK*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0036	cloud	direct	high	248	0.996	GCA_001053535.1_00623
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	69595	70113	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	28981	29499	GCA_001053535_1_15_77	GCA_001053535_1_15_77	-	106915	.	PDB:5W5E_O	major-tail-protein	MSISINQIVNGNVYINGNSQMGRANEVKIPDVEFEKISHKGLGLHGEIKLPAGTTALEAEITWDSFYPEVRALLLNPYKNSQLMIRSNLQVFDSRGLAAEEPMVTIMNVSASKIGGTAQKNKENSEFGDTVDVYSIKQTVAGKEILFIDVLANIYRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0037	shell	direct	high	518	0.998	GCA_001053535.1_00624
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	70127	71509	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	29513	30895	GCA_001053535_1_15_78	GCA_001053535_1_15_78	-	106915	.	PDB:3J9Q_C	sheath-tube	MAFHHGTKTIRVAGGSVAVETVDGAIIGIVGTAPTGAVNELTVCQTTKDFSKFGVILGKGFTLPDAFDVLSRYSAGKVYVVNVLDPAKHKTSVTDEALKQDANTLRAKTAHPGLLNLTLSTDRPLTLGQDYAVDLQTGEITLKAKHETLKATYEYADPTKVTEDDIKGGIDSATGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALTTLAEQLKAVAYVQLPKGTSLSDAIKGRGPLGTINASASTERARHFFPYAIGSSNTLESLAVHAAGLRMKTDTENGYWFSTSNRPLQGVIGMEIPLTARVDDEQSETNQLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRRTELQFIDRPIDDALIDSLLETVDTYLRALPSIVGYSVSLDYDTDLVDEFSKGHVPLVYDYTPKLPAELISNKSVMTRKYLVNLVSQR*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0038	shell	direct	high	1382	0.999	GCA_001053535.1_00625
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	71519	72004	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	30905	31390	GCA_001053535_1_15_79	GCA_001053535_1_15_79	-	106915	.	PDB:2GJV_C	tail-completion-protein	MSATLPILESIQQRIADKTDKFSIELFPDDLEHYNLTDEFGAVLVQYAGSKFESIDSVDVIQQRRVVMVALTVIARSQHDDHGAIEMLDQLRLAIVGFKPTNCTACSLVSEEFGGESDGLWQYQLLVQTETWQVELCEPSNLPKFTTARYRRADKPNPKQP*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0039	shell	direct	high	485	0.998	GCA_001053535.1_00626
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	72006	72440	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	31392	31826	GCA_001053535_1_15_80	GCA_001053535_1_15_80	-	106915	.	CDD:cd08053	head-to-tail-adaptor	MYITAQDLEDVMSESTLIALSNDTSRATTANQMTLDKACEYATETVDGYLRSRYVLPLNQVPTLVRNICLQIARHWLYSRRPDGKGFPDNVRETHAQALKDLERIQNGKLHLGLTEIGSATDDNYPTALKFNTRAPQKLDLTGY*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0040	shell	direct	high	434	0.998	GCA_001053535.1_00627
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	72440	72751	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	31826	32137	GCA_001053535_1_15_81	GCA_001053535_1_15_81	-	106915	.	.	hypothetical protein	MSDKQKTAFLVAAAMAILHNGKRYEQNDVIELTEEEADKLAIYITPAETNSEQRAQAEQTASDELTAAEQVESDAEEAAAETAAEEPAEEAGETTKSNKGKDK*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0041	shell	direct	high	311	0.997	GCA_001053535.1_00628
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	72821	73747	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	32207	33133	GCA_001053535_1_15_82	GCA_001053535_1_15_82	-	106915	.	PFAM:PF03864.14	Major-Capsid-protein	MTDLSKQRVVDPVLTALAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNETEGVYPLRQYATGVTQDVIALGREKACADLALNEANYETTNKVTLSGTSQFTDPNSDPIGVIKTGIRAIKRTTGRKPNVCAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLIKVDRVVVGEAVHEQAGELKDIWSKAIVLAYVAPASKEQKQNIYEPSFGYTVRRKNGLYVDTYPEVGGKVEIVRTTDINKPYIVGKSAGYLIKGCI*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0042	shell	direct	high	926	0.999	GCA_001053535.1_00629
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	73759	74862	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	33145	34248	GCA_001053535_1_15_83	GCA_001053535_1_15_83	-	106915	.	PFAM:PF10123.8	head-maturation-protease	MQLIEIFKAGKRTDANGLEVEITTEDLQQAVNAYNVNFHESPAVIGHPKHNAPAYGWVKRLELDGDVLKAEFDQVDPEFAEMVDKGRFKKVSSSFYLADSPNNPCPGNLYLRHVGFLGAMPPAVKGLRNPEFAEDEQGVVDFSDWAEASLWRRLRDWFIGTHGQEEADKAIPDYLVLSVQEESIRNEYKRINQTEVGSPIPSFNEPTLEQPSEPQGEPEMTPEEIEQLKAENQQLKAEKAEAALNQAKADNADFAEGLVKAGKLAPVAKQQAIDLLNLGSTSAAGGVVEFGEGESLHGKIKAFLEAQPAIVEFNEVATKENATTAEDGTVEYAEGTSAESIDMDKKVRAYMKEHNVGYTTAFNAITQ*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0043	shell	direct	high	1103	0.999	GCA_001053535.1_00630
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	75111	75575	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	34497	34961	GCA_001053535_1_15_84	GCA_001053535_1_15_84	-	106915	.	CDD:pfam05069	virion-morphogenesis-protein	MLKITINDNQAIQKLTSIANQLEKPRQLYGLLGETLKKIHDARFKAEIDPKGNRWQALSPRTKALKMKRGKSTKILRQDGYLSDKTAYNYDNDHVEFGSDAKYARLHQFGGNAGRGRKVKIPARPWLGINESDGQKLLKKSTALLQRQIDKNLK*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0044	shell	direct	high	464	0.998	GCA_001053535.1_00631
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	75701	76957	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	35087	36343	GCA_001053535_1_15_85	GCA_001053535_1_15_85	-	106915	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFEEQVKYFEKKLNLPTNSYLDVLGEEHDYFFMVAGANRNEVLTAFREAVDDAIANGETLEGFRKRFDDIVANTGWQYNGGRNWRTRIIYDTNVYGAYNRGRLAQHLDLVDVLPYWEYHHHDNEHPREEHIALDGTILPATDPFWRYYYPIKAYGCHCTVSAHDADDLAEMGRNVSPSPEIEWEEKLVGVRSGNPRTVRVPKGYDVGFAPYNFERLTQSRDVDVDKLLLQKMTTAEPHLASLLIDDVLKNPKAMVLLNGAMKEMVDTVSQQKIARGNMKYVGAIPEPVLTKLDNLEKAPQSAVIAVRDEDVLHALRDTKQAKGISLPVEFWEQLPEKLRHPKAILLDDQQKQPTLLFVYETEQGKVAVKMDYEIKLKDALSGKKLPHKLNMVRTASRLEDLSSLGRFEVLYGEL*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0045	shell	direct	high	1256	0.999	GCA_001053535.1_00632
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	76959	78386	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	36345	37772	GCA_001053535_1_15_86	GCA_001053535_1_15_86	-	106915	.	PDB:5NGD_C	Portal-protein	MTTKKQDLIGVIATRAKAIDFWSFMHYLPNPDPVLKKMGRDISVYREILSDSHVGGCVRRRKAAIKGLEWRITPTGNEKTDEILVSLFDRLPVNQIINQILDATLFGYQALEVMWASENGLLLPTEIVGKPQEWFVFDEDNRLMLRTKENRNGDIVPEKKFLLATQQADYMNPYGRADLAMCFWAATFKKGGFKFWLEFAEKYGSPWLVGKYPRNANAHEIDELLDSMEKMLGTAVAAIPDDSSIDMLESGSKGGSSQVFDDFLRYCKSEIAIALLGQNQTTEAEANRASATAGLEVTRDIRDDDARMVEGVFNQLLAWICELNFHVDMLPTFELYEQESIDKLQAERDELLVGLGVQFTEQYIMRTYGFEEGDIVVAAPEKSAVKNTADFAEAIPKSIVETIGEQLEVEGEPFVEEWLQSIQDKLSQAESLEDFRNQLDSLIPELSFAEYGKVMAWASTAAHFAGRQSVEDERK*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0046	shell	direct	high	1427	0.999	GCA_001053535.1_00633
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	78389	79618	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	37775	39004	GCA_001053535_1_15_87	GCA_001053535_1_15_87	-	106915	.	PFAM:PF03354.15	Large-Terminase	MFARQTGKTFTTTFEIVMDCLAAEAKGERTRWVILSRGERQAKEAMNEGVKRHLEALGMVCEVLEVPFNSTINALEVVFPGGSKITALPANPDTARGFSANVFLDEFAFHADSREIWKALFPVISAGWKLRVVSTPNGKGNKFYELMTDVNNTEWSRHTVDIYHAVADGLPRDVEQLRRGLNDEDAWAQEFELKWLDEASAWLSYDLIDGVEHPDAGKPELYQGGACFVGMDIAVRNDLTVIWVVELVGDVYWTREIVTLKRVQLRQQQEELNRIMRQYHVVGGNLDQTGMGEKMVEDAQYEHGKRIQGVLFNVSTKLKMATIGKTAFEDRKIRIPQGDADLREDLHKLKKITGSNGQPRFTAESDSNGHADRTWACFLALTAATEAVMQPVKAYSRKQRTSRKMTQGY*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0047	shell	direct	high	1229	0.999	GCA_001053535.1_00634
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	79680	80249	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	39066	39635	GCA_001053535_1_15_88	GCA_001053535_1_15_88	-	106915	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MTDKNTRGRASKVDLLPPNIKTQLAMMLRDKHLSQAQILEEINDLIRDCGLDDSYQLSRTGLNRYASRMEQMASKIRNAREVAEIWTKQFGEAPQSDIGKLLMEIVKNLAFETSIGMSENGQAEPKDLALLSSAIQRLEQAESLSFKREQAIRQETIKRAAEAVEEVGKEQGVSLEDVQKMVKAVYGIE*	mmseqs_cdd	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0048	shell	direct	high	569	0.998	GCA_001053535.1_00635
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	80272	80577	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	39658	39963	GCA_001053535_1_15_89	GCA_001053535_1_15_89	-	106915	.	5X11_E	Transcriptional regulator/DNA Complex	MMRQDIFTKDQRLVILRSLEECGYDANESILNDCLDMYGHDISRDLVRNHLLWLEEQGLITLARLNNNGKDFFVATITQRGLDVAQGRAFVDGVKKPSPKI*	hhsuite_tools	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0049	cloud	direct	high	305	0.997	GCA_001053535.1_00636
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	80574	80903	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	39960	40289	GCA_001053535_1_15_90	GCA_001053535_1_15_90	-	106915	.	pfam10805	Protein of unknown function (DUF2730). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	MLETLEFIQRHWAIVVAIGGAVWTYFWLTMDSKYARKTDVSDLRKAIENNEKSLSEVKGELRHLPTSKEVADLRLLMTEMKGKTDVLNTNIGSLNHQVKLLIEKEVNKE*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0050	cloud	direct	high	329	0.997	GCA_001053535.1_00637
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	81024	81275	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	40410	40661	GCA_001053535_1_15_91	GCA_001053535_1_15_91	-	106915	.	pfam10883	Protein of unknown function (DUF2681). This family of proteins is found in bacteria. Proteins in this family are typically between 81 and 117 amino acids in length.	MINLYIVGAAFAVLAGVFIHGRVQAAKIRKQQEEIEFVKREAAAVAQELENANTAKNITETNRTLSSKSVDEQLQSKGYFRED*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0051	shell	direct	high	251	0.996	GCA_001053535.1_00638
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	81268	81507	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	40654	40893	GCA_001053535_1_15_92	GCA_001053535_1_15_92	-	106915	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MKKMSDLITNADGRLSTTAFIQFFGALLMAGILVFCVWLNRSYVPELFTTFALFCGGGAATKGFANAMQNRNSQGGNGD*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0052	shell	direct	high	239	0.996	GCA_001053535.1_00639
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	81504	81845	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	40890	41231	GCA_001053535_1_15_93	GCA_001053535_1_15_93	-	106915	.	.	hypothetical protein	MKREIIGLTHFSCILDGLIFLGFIAANEFNIKNLIQSYELFFYFITALSVLVISIGFPEPKHQYTKARFYWEIIANTLLGIMLAYYGYFLCATILTFIGYMISKHNYFTEGKE*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0053	cloud	direct	high	341	0.997	GCA_001053535.1_00640
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	81845	81997	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	41231	41383	GCA_001053535_1_15_94	GCA_001053535_1_15_94	-	106915	.	.	hypothetical protein	MSKRVKNTTSPKYWKNYKAPRCKPSNNAKRNCRINGGTTAAQGFYLYWSY*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0054	cloud	ambiguous	low	3	0.02	GCA_001053535.1_00641
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	81994	82203	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	41380	41589	GCA_001053535_1_15_95	GCA_001053535_1_15_95	-	106915	.	.	hypothetical protein	MFLLGMFVFVAVILLIIDQEFAALLCAGGAVCCFVVIITMIDIQNTCQSYGKFKVGGNIYQCQLIQEPK*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0055	cloud	direct	high	209	0.995	GCA_001053535.1_00641
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	82218	82769	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	41604	42155	GCA_001053535_1_15_96	GCA_001053535_1_15_96	-	106915	.	PDB:1M0D_D	endodeoxyribonuclease-I	MSLSLPITKIVIHCSATRNGKQLRTVNQTAAQRINDWHSQRGFKRDPILAKKFNPHLPNIGYHFVIDTDGTVETGRMVGEIGAHVKGHNQHSLGICLVGGITTTGKNHGEYTEEQWLALHKLLQKLESEHSSARICGHRDLSPDVNGDGTITPSEWIKDCPCFDVWSWLDSEQVINVDHLFRG*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0056	shell	direct	high	551	0.998	GCA_001053535.1_00642
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	82852	83415	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	42238	42801	GCA_001053535_1_15_97	GCA_001053535_1_15_97	-	106915	.	.	hypothetical protein	MIDEDILNIARKAWKKKDYNAARDFYQQVAYGYNYFTEPEKEAFTKEVSIFAGEDPMYQEILKLVISQIMLEKEPLLQSKLTNIVKQDHGERGAELLRYVLYYADYRGEVIRKKAGRSYILELPKTLSFTENTSKSEPIEDSEKPLSIIQALKTGINKAKNEPTKPSDIIGLIIFLAIIWAVYKIFS*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0057	cloud	direct	high	563	0.998	GCA_001053535.1_00643
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	83512	83892	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	42898	43278	GCA_001053535_1_15_98	GCA_001053535_1_15_98	-	106915	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MLNASNEQIETFNEKAPEILADLAKHTEVKIKEKIADIEPKLAQQISIEVANHIAQCWGGEVIYIPRNLVLLLNERDRKIFNEFNGTNHRELARKYNVSMQWIYQIVKKITKEEIARRQFDMFGNS*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0058	cloud	direct	high	380	0.997	GCA_001053535.1_00644
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	84046	84588	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	43432	43974	GCA_001053535_1_15_99	GCA_001053535_1_15_99	-	106915	.	.	hypothetical protein	MKLCRCPVCHSDIHLDQLLEDEAGREILGMLTELKYGVARPLVSYIALFRPDKSALSNSRAVKLMREVLDLFPPSQLLAHCLSETVNSVQKKRRESRNLAPLNNHRYLMQVMETNRPLFSGTGSAAVNNAERQQAERANQGNDDIENTILYIERFYQLGQPVEHLPGYDVWKKWKDKQQK*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0059	cloud	direct	high	542	0.998	GCA_001053535.1_00645
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	84585	85046	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	43971	44432	GCA_001053535_1_15_100	GCA_001053535_1_15_100	-	106915	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MHKTKPKLIQLIHIAKQKLAMDEYSYRAMLERVTGKTSCKEMSVAELMKVEAEMEAKGFKKTSSRNHSPSGKSAVVKSNIAYKIRAIWIEMSKQGLVRDGSENALNAFVRGVVNPIYAKRGMNIQVLNVGALRDDMASLVLERLKKWQARGGL*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0060	cloud	direct	high	461	0.998	GCA_001053535.1_00646
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	85119	85583	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	44505	44969	GCA_001053535_1_15_101	GCA_001053535_1_15_101	-	106915	.	.	hypothetical protein	MKVLDEHILEYIWDETLDRIAQGTLVTYIGGSVGTYSDERAAKDAESFAILSISQLIAGSALSESQFRRRVKKLMAQGVLLQRIGPNSFVIKSDVIKDVAVQAARCWRAIGVPYGMDDTGKACKTLPINALPRSIFELKTNCYLILRSKYPNYK*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0061	shell	direct	high	464	0.998	GCA_001053535.1_00647
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	85580	85750	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	44966	45136	GCA_001053535_1_15_102	GCA_001053535_1_15_102	-	106915	.	.	hypothetical protein	MTEQEKMRLDEQLEQAAKQLTHALCALRTGQNQHAAVYVGNVQNLLPGLRMRLGKV*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0062	shell	direct	high	170	0.994	GCA_001053535.1_00648
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	85747	85911	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	45133	45297	GCA_001053535_1_15_103	GCA_001053535_1_15_103	-	106915	.	.	hypothetical protein	MAKYIARFYCLVEAVVEAESNEQVLDMCDLNVCDVNKLPHTITEIDDVVEVEEV*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0063	shell	direct	high	164	0.994	GCA_001053535.1_00649
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	85921	86115	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	45307	45501	GCA_001053535_1_15_104	GCA_001053535_1_15_104	-	106915	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MGNIHKFNRFKYYSEKAAISERQGDLQDAKEQWAIAELNASGQKNKEWCKWRGAFCDRVIRKPF*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0064	shell	direct	high	194	0.995	GCA_001053535.1_00650
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	86282	86803	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	45668	46189	GCA_001053535_1_15_105	GCA_001053535_1_15_105	-	106915	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MAKKPTRIKTDTFAVRYQTRDEVEVAIKEIGDLNRELERLAIEQNDRLAAITEEYAPLMNAIKEKLAPKQDAVQAWCESRRDELTLNGKTKTGTFNTGEVQWRQRPPSVGIRGTESVIESLHTLGLVRFIRTKEEINKEAMLNEPELAATVAGVTIKTGVEDFVITPFEQEAK*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0065	shell	direct	high	521	0.998	GCA_001053535.1_00651
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	86820	87146	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	46206	46532	GCA_001053535_1_15_106	GCA_001053535_1_15_106	-	106915	.	.	hypothetical protein	MTSITKNNTLREQTKPHPVFGGYNKIALGYLSQTQKCVVELNKMGLHVLSIEFDKIKPRVRIEPNALTKKLEKTGQALAYIQGNDGVHFAEYQMMVEGIKVIWRSYLH*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0066	shell	direct	high	326	0.997	GCA_001053535.1_00652
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	87146	88063	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	46532	47449	GCA_001053535_1_15_107	GCA_001053535_1_15_107	-	106915	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLIEQIKQLLDNQVHTQREIAAQAGISAGALSAYLKGTYTGNVENVEVALKNWLSTREKKEKVFVEAPHFIEIPTAKKVFSALDMAKILPTMVTVYGASGVGKTKACQEYKKANQNVWMITASPARATLSSILYELALELGINDAPRRKDRLSRLITKKLKGTQGLVIIDESDHLPYDALEEIRIIQEEAEVGFALIGNDKVYTRIQGGVNQAHEYARLWSRIGNNCGVKASTKGDIKAIAQAWGLDIADKDLMTVLYDIGGKAGGLRALTQYLRLAGMTAKGQGTVITLDLILTAQAQMKGAN*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0067	shell	direct	high	917	0.999	GCA_001053535.1_00653
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	88087	90057	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	47473	49443	GCA_001053535_1_15_108	GCA_001053535_1_15_108	-	106915	.	PDB:1BCO_A	Mu-Transposase	MEKWLTVQELLGLETLPKSDRGITKKADRENWVKRQRDGVKGKTFEYKFSSLPEDTQAEILLKQNATPVMAEAPKAKKELNYLPEVIWKPYEKATDKQKEEAKAKLAPLHKLDDLVKNNVALMMALDAVSTEYEIAKGSLKRWYYKVRSFERPDWLPLLLDKHSNKKAGKEADFTEEAWEAFKADYFRPECPQFGSCYERLKRAARENGWSIPSASSIKRKIAREVPKLVQVQLREGDHAVMQYYPSMRRTVAEIEALEWINGDGYQHNVFVRWHNGEIVRPKTWIWQDIRTRKILAYRVDLSENSDTIRLSLMDLIWKYGIPKKCTIDNTRAAANKWMTGGVKNRYRFKVKEDDVTGIIPMLGIELLWTSVQFGKGHGQAKPIERAFSHGGLGELVDKHPSLAGFYAGENVYSKPDNYNGGKDGVDYDTFILAIEDGIRTFNEREGRQTEICQGIYSFSQVFERDYAKAQIRKASAEQMRFLMLMSEAVTLRKDGTFELEAGGKVNNRKNRYLASELIATAHRKVVVKFDPQDLHNKVWVYGLDGVFLAEAKCTDAVAFGDKAKGREHDKARKQMVKAVKAQAKATLTMNAQEAARYQPQFEEEEPLEPKIIELFRQEGNAVRKHEAVLDDDEETNDFEQGWRKGLAMIKEEKGL*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0068	shell	direct	high	1970	0.999	GCA_001053535.1_00654
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	90071	90283	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	49457	49669	GCA_001053535_1_15_109	GCA_001053535_1_15_109	-	106915	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MKKSKKNMHRADIIAAIRKQGTTLTQLSVDAGLHPRTLANALDRKYPKGEKIISDCINVPVQEIWPERYL*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0069	shell	direct	high	212	0.995	GCA_001053535.1_00655
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	90505	91362	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	49891	50748	GCA_001053535_1_15_110	GCA_001053535_1_15_110	+	106915	.	PDB:2FJR_A	Repressor-protein-CI	MDENLIGLPASDKGIVKKADRENWVKRQREGVKGKTFEYHYSSFPIEIQKQLGFSMPKEWFSANELKDFDGMPNSPQGVNKRARTQNWEKRERDGVQGGALEYHVSSLPPTVQKDLGFYPTETRMIVPNITETLGRYVKEAINKATELVSVPFYNTFASAGFGAFNDDVYEPDDFVGLSAHWLQQRGLQKNKLAFILTSGDSMTPTIHHGDMLLINRAVTTPRDGQIYVIRSGDQLWVKRVQGIPGGIRLISDNKEIYAPIELMFEDNLNFEVLGQVVFIGHDLI*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0070	shell	direct	high	857	0.999	GCA_001053535.1_00656
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	91586	91828	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	50972	51214	GCA_001053535_1_15_111	GCA_001053535_1_15_111	-	106915	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MYTRQAVFPFSTHCFLQALFGGETGEIMKSIQAKFLGLDITVINHEDKPYVPMKQIAENIGLVWHAQFERLQRNEIVTNH*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0071	cloud	direct	high	242	0.996	GCA_001053535.1_00657
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	92143	92550	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	51529	51936	GCA_001053535_1_15_112	GCA_001053535_1_15_112	-	106915	.	PFAM:PF16462.4	tail-assembly-chaperone	MSLREELLKNKPKVHPFNYNGVTYFFREFNVGEMNQALYGQHNELLKLAEKQGIELNYDDEEELTKQLTKVHDPDRLSRVLAIRLCDADGKNLFDPNNQDDLAALRSLDKGLYEALNIAVMDLLPKNLATDESSK*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0072	cloud	direct	high	407	0.998	GCA_001053535.1_00658
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	92610	93266	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	51996	52652	GCA_001053535_1_15_113	GCA_001053535_1_15_113	-	106915	.	PFAM:PF06199.10	major-tail-protein	MPTQTTSFQGTKFYLGVGLNEGKAVTAATVKPNATITATGHGAKTGDFVKITGLGALDGFYPVKSIATDKITLADEVDWSGQDAPTDFSSAKVAVVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATPMQQDLRKKFYAKETFPWMMVMKNNQGSLYGTGFIQTSPNFSGEVKGKFDSGVTIKKAKRDYLLPVNA*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0073	shell	direct	high	656	0.998	GCA_001053535.1_00659
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	93269	93679	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	52655	53065	GCA_001053535_1_15_114	GCA_001053535_1_15_114	-	106915	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRQKLTSLLKESQIGVNEVYSGRPLFIDIDQEQSAVAVFIDAIQAEPVDLCHYEYIADLNIATYLKTAIGEDALDEIAEKIKKRLESAVDNGDLPEEITEITLSGYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0074	cloud	direct	high	410	0.998	GCA_001053535.1_00660
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	93689	94216	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	53075	53602	GCA_001053535_1_15_115	GCA_001053535_1_15_115	-	106915	.	PFAM:PF06763.10	minor-tail-protein	MKSSVDGIEQLSANFGKAKRDTPKAAVSAINTVARRAMQNGTRKVAKELSIQQKIVRKRARLRRRATSERPEAEILVDRRKLPLINLLKAGGDKLYEGNGAILVGPYGVERGFKQKLKNGRTHIMQRKGQARYPIDVVKIPLAAPLTNAFRAELKDYGSQIKVEIAKKLTSAFKK*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0075	cloud	direct	high	527	0.998	GCA_001053535.1_00661
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	94219	94530	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	53605	53916	GCA_001053535_1_15_116	GCA_001053535_1_15_116	-	106915	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDETPKVMGGNYSDDYLINGTTRTLTLFRASGYKPKLGDVITTTTTEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0076	cloud	direct	high	311	0.997	GCA_001053535.1_00662
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	94511	94834	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	53897	54220	GCA_001053535_1_15_117	GCA_001053535_1_15_117	-	106915	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MSKNYVQDGSTVRFTAAANVKSGDVVILENLAAIAVSDVAQGGVGVGLTTGVFTVKAKAADDIKQGAIVYWSATEGATITAGSNKRLGVAWRASGASVDTVDVKINA*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0077	shell	direct	high	323	0.997	GCA_001053535.1_00663
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	94914	96914	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	54300	56300	GCA_001053535_1_15_118	GCA_001053535_1_15_118	-	106915	.	PDB:6WKK_D	Major-Capsid-Protein	MAMAANVTKTNNQSWYSIKAKANDTAEISIYDEIGFLGVSAASFAQDLKDCGNNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYANKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFEKMPNEIKNMLFKPQGNAGASAQQATQTEQSAPVNQTQTMTVDNTAQVQAELNKRNADIKAVFAPFGSAHDSLLVECLGDLSITAEQAKDKLLAKLGANTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNSMTLRELARASLVDRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAKAQDGKALFDASHKNTITNAVLDLANIDKGIQLMNGFVNARGEPLAIEPEFMLLPTSMYTRGLQLIKSASVEGADANSGIINPLRDIVTPVKSARLQAADEKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0078	shell	direct	high	2000	1.0	GCA_001053535.1_00664
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	96880	98403	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	56266	57789	GCA_001053535_1_15_119	GCA_001053535_1_15_119	-	106915	.	CDD:COG5511	Major-Capsid-protein	MGILDKAIAAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPLNLNGDVDEVLAEQIRKKWAEWSVRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVVGLNHSTDIAFSLEALEPDFVPMWQSDTANVIQGIEINAWRRPVSYRVYMDNPQENNRTYGRVKMVPAENMLHLAFKKRLHQLRGVSMLHGVIVRLSDLKDYEESERVAARIAAAFTMYIRKGDAAIYGDNEDYSTDSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLEPFRNGQLRATAAGTRSSYSSIARDYNGTYSSRRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIKVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRKVEVDENRELGLKFDTDLTNTGTTNEKTKDDSVANGNGSERDKDE*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0079	shell	direct	high	1523	0.999	GCA_001053535.1_00665
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	98407	98625	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	57793	58011	GCA_001053535_1_15_120	GCA_001053535_1_15_120	-	106915	.	.	hypothetical protein	MIYDKEELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0080	shell	direct	high	218	0.995	GCA_001053535.1_00666
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	98622	100745	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	58008	60131	GCA_001053535_1_15_121	GCA_001053535_1_15_121	-	106915	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRDDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSEGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGFMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQFKDRISNALSRETVGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYTHAIAILRGYERIKWGDEDNVPYWAKLPGLNPDVIRKEITAPEEETESAVEIEQVKPQPKPKTKSNWLNGGVSKKKGGWL*	hallmark_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0081	shell	direct	high	2123	1.0	GCA_001053535.1_00667
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	100748	101221	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	60134	60607	GCA_001053535_1_15_122	GCA_001053535_1_15_122	-	106915	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVLAFEVAQEMSFLAKSVVQPLDTLPDILERDCGLNPSQLIRVMQVIDDIKLQMSSRIQAGDNKSEE*	mmseqs_cdd	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0082	shell	direct	high	473	0.998	GCA_001053535.1_00668
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	101387	101611	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	60773	60997	GCA_001053535_1_15_123	GCA_001053535_1_15_123	-	106915	.	.	hypothetical protein	MTMLLSGCTNKVTTKTEYIYPPQAFLTPCVKTPFTGSTYGEAVEHLIIVQGERDMCASQITNINKWINQTKAAK*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0083	cloud	direct	high	224	0.996	GCA_001053535.1_00669
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	101583	101915	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	60969	61301	GCA_001053535_1_15_124	GCA_001053535_1_15_124	-	106915	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFKIYAIAIIALTILGLCGWIWHQSKNIDELRAENQVQAQTIKSQEQVNQSLKDTIEAERQAVEQQRVINDEIKQTTQDKVQVVRKIIKSQPCYNTRIYDDAIERLH*	mmseqs_cdd	nonviral_gene	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0084	cloud	direct	high	332	0.997	GCA_001053535.1_00670
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	101885	102433	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	61271	61819	GCA_001053535_1_15_125	GCA_001053535_1_15_125	-	106915	.	CDD:cd16901	P1-lysozyme	MMVLGKTRKALGACSVVAVIGIMYSQFGSELRLSPAGAEIIGNAEGCMATPYKCPADVLTVGIGSTEYSGQKIEPGKKYTNEEIAYRWKNDIKLAESCVDRYANGRTLPQSVFDAMVSVTFNNGCGNLKNSTMFRLMRSGKYIDGCNQLSRWVYADGRKLQGLIKRREKERALCLADLKSTQ*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0085	cloud	direct	high	548	0.998	GCA_001053535.1_00671
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	102411	102668	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	61797	62054	GCA_001053535_1_15_126	GCA_001053535_1_15_126	-	106915	.	PFAM:PF16082.4	holin	MRMLKDAGNQSIFWSGFGAFWAMYSFQEWLAIFGLIIGLISGLVNMYAKCQEGKARENEERRAEEIHKARMKRLERGLDDGVGED*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0086	cloud	direct	high	257	0.996	GCA_001053535.1_00672
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	102999	103301	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	62385	62687	GCA_001053535_1_15_127	GCA_001053535_1_15_127	+	106915	.	.	hypothetical protein	MKNLNQQLNHLTPSADWITTKLQDAYDNLNQQLNIVVDDKNGFFAVAIAYQQACDQKPEVADKMQRIASLIVKRANQIEKRRKALINSLTITEQEQLIIA*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0087	cloud	direct	high	302	0.997	GCA_001053535.1_00673
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	103361	103870	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	62747	63256	GCA_001053535_1_15_128	GCA_001053535_1_15_128	+	106915	.	.	hypothetical protein	MNYKEIMYTVGQLVRCVYGVDVPVNVQNTIIRFPAKGIGLMSQRGDIINTGNQDEVMRLMDKIPSDLTDPKDKMEFDAQGAFWLGYYHYAKITDNVANYGANELAVVGNALYGDQWQTALSRDLNLSSPRRMRAWISGERKIPTGVWFDIISLLKARQLKIEEIIKKLA*	.	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0088	cloud	direct	high	509	0.998	GCA_001053535.1_00674
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	103903	104271	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	63289	63657	GCA_001053535_1_15_129	GCA_001053535_1_15_129	-	106915	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MTYSVERILEKWGSCWGRDRIGTEYPSTTISIPVLPTARKAYIKFLTDDECLKVETQIINLHDDNLLQYQIVMGLYVQQASEREICNALNISPAKMYRERAQGIRFLKGAFVAAKIKFMFLG*	phrogs_hmm	hypothetical_protein	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0089	shell	direct	high	368	0.997	GCA_001053535.1_00675
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	104261	104623	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	63647	64009	GCA_001053535_1_15_130	GCA_001053535_1_15_130	-	106915	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTTITLELPFPPSVNTYWRRVNGKTLISAKGRAYAAQVAWMTRRSARFPAGIRAAVVVEAFMPDRRMRDLDNLFKSLLDALVKAGVLVDDSVIDDLRIVRKCVVKGGKVLVSISEVVNDL*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0090	shell	direct	high	362	0.997	GCA_001053535.1_00676
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	104669	105661	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	64055	65047	GCA_001053535_1_15_131	GCA_001053535_1_15_131	-	106915	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MQVLLLTPYKQSDLGLMMFRIPRNAAQVMTKRMVLMPEPTELQHKESGVVNWQGAISEEFPPLVVDFLKNKEVRSKLLTKKALMNFVASIKHCQLSDGEYCHKELTITPHLDGFIRTCWHHDTEMRKGNYDAEKASLVVEQNIEQAIIAKIQVDLKHARPLTESDLVLYCFKNGLQRLLSDVLLRKVFSVKNYERDNKESSTRFEDPLIYHMDRLDKAILNLKADDDPPLQYMARPKPQYIRSEKWLRWVKTQPCVCCGKQADDPHHLIGHGNGVMGSKADDLDCIPLCRIHHNELHQNVKAFEEKYGSQIELWHKFFLYSIKIGALVID*	common_virus_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0091	shell	direct	high	992	0.999	GCA_001053535.1_00677
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	105661	106290	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	65047	65676	GCA_001053535_1_15_132	GCA_001053535_1_15_132	-	106915	.	PFAM:PF06992.10	Replication-protein-P	MNVAIRQENCVSGVDLNTHVSELVNQLFNRLCAYCNRWRYNYPTDEALEEAKFIWIEELVNHDVLSVDMLERGLARVRAARNDYFPNLFDFIEWCKIPMDLPSEEELVQRLASFQRYGMADVDKFKFNSTVEYWLITDLYCRCRRYTWSVEQLRKEIKQALRNMADRLKNGEVLPEPTKQLPSQATSMPVSKTRQAEIIASIKGSLRGH*	rep_hall_hmm	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0092	shell	direct	high	629	0.998	GCA_001053535.1_00678
GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote	cenote	CDS	106287	106913	GCA_001053535.1	JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535.1_JVSU01000038.1	GCA_001053535.1|JVSU01000038.1	GCA_001053535_1_15	GCA_001053535_1_15@C3	65673	66299	GCA_001053535_1_15_133	GCA_001053535_1_15_133	-	106915	.	pfam09524	Conserved phage C-terminus (Phg_2220_C). This entry represents the conserved C-terminal domain of a family of proteins found exclusively in bacteriophage and in bacterial prophage regions. The functions of this domain and the proteins containing it are unknown.	ATSGEKRHQLQKAPPVAKSATTPVAENATATSGEKRHPTKTNNKTNINNPPIVPPAEQVVLDYLNMALANLAEEQGERKPTGYKLTDKTKQAIGARLAEFDLGVCKRVVDYLVSKWGRDPKMVEYLRPSTIFRPTNFGEYVVGSERWDNKGRPEMRDGAWVMADGTMLKPKGSAPNPASKSTDWAKGRQIQIRNPQVAEKLRKMGMLK*	mmseqs_cdd	common_virus	C3	66301	40615	106916	GCA_001053535.1|JVSU01000038.1@region_40616_106916@tool_cenote_CDS_0093	shell	direct	moderate	432	0.689	GCA_001053535.1_00679