core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	2	1864	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	3	1865	GCA_001053575_1_20_1	GCA_001053575_1_20_1	+	4600	.	CDD:PHA02564	virion-protein	KVFYQIGGGSAVMPAPSRKRPHELTLGIGWNANLMCGNFDIKTTVKNQLNGITEGFKDLMGNIIQSATGAVASMPAMIIQRANPQLYDLLTNGVLQGRLDFDNLKTSCEELSNKAADYLADSGWNMMAKSQNYSSIGQNQKDANLAKKQMEEEDGKNGIPWIGGKKQGGQNQEPINVLGGVLTAGFNMSNGKPVTNKSAIPDCDGSLCSTWQSPKEVADWGTRVLGESIKTTCTVCGSPSSKPGVGLAPLIEEENIALLNEFQRVLNTKNPTAEDLRAISSTQMPVTRGLLEALKEDPDVRLLAPRLASEIAISRTLEKALLLRRTMLTGMKEPNVANNKEALAEMEKNLTTLDREIEQTEMEMRLQRQITGNTALATLEKRAIDRQKSLQNNSPDDNENRAKQLSGSVDDAQSDNSNEGNFQIDDPQINLPIPNMSGLNKLNGLWGPGSHGQDPSSGSGAGGSSSANLKKYESKDAYADGRATVYRTPDGKLVRREGGSLAWRNNNPGNIRAGAFAKSLGAIGVGPGGFAIFPDAETGARAVGALMRTQNYKNLSIADAIARYAPPSENNTAAYQAAIRKQTGLDSTRKMSTLSDAELGRVVNAIRQHEGWKEGKTSTQ*	hallmark_hmm	common_virus	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0001	cloud	direct	moderate	1826	0.98	GCA_001053575.1_01111
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	1873	2235	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	1874	2236	GCA_001053575_1_20_2	GCA_001053575_1_20_2	+	4600	.	.	hypothetical protein	MMKCKVLLTAVSLLVSAGYVSAANPSSVNYDTPVTLEGTLKVEKGYPMLYLPAPITAVAGAGSDGLYDTFNGAKKLQIVWVGEKLPAGCMLATGSLFGAHTADHKTDVLIQLESYKPCSK*	.	hypothetical_protein	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0002	cloud	direct	high	362	0.997	GCA_001053575.1_01112
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	2290	3276	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	2291	3277	GCA_001053575_1_20_3	GCA_001053575_1_20_3	-	4600	.	pfam20390	hypothetical protein	MNIGVLIMSNLTTQFVPFFLSCSQFLGGATPAIVTRYNLKNLLKQNWTHFKPKLTPSNVLGERRYFWEFFSGHCIEWRYRKYEGRIGSSFNQEFLPMFTNLLSSEMILDWKCEIQTITNVSCSKSCLSDFSDLNDVVTQNSRELISEITLENLAKNMNHYESKIFHESTQTVSCELWSKTFTWHNTGGSHHFAAARYIANKLDEEIDLTAKLEITYLDEQKFRDLFSKYEIFLISSKNTEQYRILFETLLNSKVPFITAPIDSYFNDRKDYSALKLLAFYRTDKKSAPIIDLFKNSSVLDLYGYFCTLLVQQLGAQERLKKILYPHHR*	mmseqs_cdd	nonviral_gene	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0003	cloud	direct	moderate	966	0.979	GCA_001053575.1_01113
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	3248	3838	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	3249	3839	GCA_001053575_1_20_4	GCA_001053575_1_20_4	-	4600	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MALIGFARVSTQQQDLTEQIRLLKEYGCTKIFAGKHSGKADQNKEQIDELLNYVREGDVVVVTKLDRLGRSLTQCLNTLEFFKKNTIGFIAILQGINTRVQDNPMGTALIQLLGIFAELERNFIVERTQEGKRVKIAAGNLEAKGGRPRKVTPVIKSKIMLDFEKGASLSQVCKKYTLSRSTVANLKSEYRSLNNE*	common_virus_hmm	common_virus	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0004	cloud	direct	high	590	0.998	GCA_001053575.1_01114
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	3853	4101	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	3854	4102	GCA_001053575_1_20_5	GCA_001053575_1_20_5	-	4600	.	.	hypothetical protein	MNTSEKLIQKLKKQFPEQCGHIKMLYRCYGLNDGVSFKWASNGIGSTVIFSYDTMTDCLKNEIGISRAIFNGEYRGWLVGVN*	.	hypothetical_protein	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0005	cloud	direct	high	248	0.996	GCA_001053575.1_01115
GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote	cenote	CDS	4119	4445	GCA_001053575.1	JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575.1_JVSL01000026.1	GCA_001053575.1|JVSL01000026.1	GCA_001053575_1_20	GCA_001053575_1_20	4120	4446	GCA_001053575_1_20_6	GCA_001053575_1_20_6	-	4600	.	.	hypothetical protein	MITPGSNQYCINTRHEACNKSMVAKAPRQNLVALSFDKDITMKDKKFVEVVDISSNHTIVVGTVGKGKRSDMFKQLLREEENNEIPEPLIGDRVISTDELIHSDRTKY*	.	hypothetical_protein	NaN	.	0	4600	GCA_001053575.1|JVSL01000026.1@region_1_4600@tool_cenote_CDS_0006	cloud	direct	moderate	204	0.624	GCA_001053575.1_01116
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	2	463	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	3	464	GCA_001053575_1_6_1	GCA_001053575_1_6_1	-	168001	.	PFAM:PF08400.9	minor-tail-protein	MTFQTGVTEFAEFVGSEIRRIEKKIPTDGGGQSSDSMIITGNGRPDKPETTDGKITGREPNGAFYNSTNGAGVGAYLWQKQNNKWTVISGDTGIRRLSNISVNIKEGAIHLRRVNNRVECSFYAGRWDTISFYGSSNPKFTRKNHAKRMDILPP	phrogs_hmm	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	463	951	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	464	952	GCA_001053575_1_6_2	GCA_001053575_1_6_2	-	168001	.	.	hypothetical protein	MARQEFNQTITDFAEFVGMKDKEIIKLIGAMQSLTTTQKDTIVGAINEMNQRINSLSSSAAGINDSATNETATLSAKKILELLNQAKADVKNELLGGQVDASIDTIKELGDMLKNIQTGEDGLNKLVQKLTQTNQSLALLVEKFTVLDGLSLKDAYNRGYNK*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0002	shell	direct	high	488	0.998	GCA_001053575.1_00082
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	951	1139	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	952	1140	GCA_001053575_1_6_3	GCA_001053575_1_6_3	-	168001	.	.	hypothetical protein	MSQGGEMCIKTKAKAKHKVTLKPKQQHKITVQKGYANIGGDFDTRTLPNINELIIHYNIGAL*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0003	shell	ambiguous	low	16	0.085	GCA_001053575.1_00083
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	1123	1458	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	1124	1459	GCA_001053575_1_6_4	GCA_001053575_1_6_4	-	168001	.	.	hypothetical protein	MNEIIFDWIRGDDEFETLIFNNDDDTPMDFTGSQFDLHIVPERSQSETIKLSTTNGLTVKENEITLHVSHDQTENADWSVASWDLQQTDKNGLISTLCGGKVRLKRDVTRG*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0004	shell	direct	high	335	0.997	GCA_001053575.1_00083
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	1451	1909	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	1452	1910	GCA_001053575_1_6_5	GCA_001053575_1_6_5	-	168001	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MAKVYLAMYKHKRDWRKEPVKAIADIITRFFTKGKYSHCEIAIKRTETLFDCYSSSVQDGGVRCKQINVSDSEKWDLISLNDVKEEKIKAYFNRTLGCKYDWWGALGVVLGVKQKRSKYFCSEWCFNAIHGGESGWRFSPSQLAIIFGVINE*	phrogs_hmm	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0005	cloud	direct	high	458	0.998	GCA_001053575.1_00084
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	1902	2657	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	1903	2658	GCA_001053575_1_6_6	GCA_001053575_1_6_6	-	168001	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MTITFNQEGFAENSGEITVYCTDAKGVYTKETTEYVSEGGSLAAGSYLDAPPQPKQGFVIVRVDNNWQYQADHRGTYYSKETGEKVEHTTLGELSDNLTALAPLNEPCKWNGTEWVKDEAKIADNFAKNQAKLIANIDEHAARIYSTWTRFESEYRERQSAAESFKAANYQGECSRYITDFAKRAGLDNQSATNLILTQAAGLEKLQVELANQRMRKYELKMPKLTLEKMQSIHDDIIKQMDALMEAYQNG*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0006	cloud	direct	high	755	0.999	GCA_001053575.1_00085
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	2667	3587	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	2668	3588	GCA_001053575_1_6_7	GCA_001053575_1_6_7	-	168001	.	PDB:1OCY_A	Tail-fiber	MGKITEQPQWEDDVYLIEKQDKVLGGELGVINVQAKQLANRTKYLKDQVDGINRDRTGYAPKASPAFTGIPTAPTANQNTNNTQIATTEFVKTAIAALVGSAPAALDTLEELSRALEGDANLKSTLLAEIGKKANATDFNALHDLFIGIPIPYPLSTVPQGCLAMNGQRFDKSHYPKLALKYPSGTLPDMRGEFIRGVDNGRNIDSGRGILSSQSDEIRSHAHKFRYVGQNQRAESNRTNIIDQLTVGDSVFRTDRPNDAIIKVANESDVKYGKTPFADVSIYINNAGGAETRPRNIAYHYICLAE*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0007	cloud	direct	high	920	0.999	GCA_001053575.1_00086
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	3588	4154	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	3589	4155	GCA_001053575_1_6_8	GCA_001053575_1_6_8	-	168001	.	PFAM:PF09684.9	Tail-protein	MNSYLLPTGSSKLEKQLSNTFSAISEIPVPIRLLWSAEHCPVNLLPWLAWSLSIDEWDDDWSEENKRQAILNSIHVHKHKGTISAIRRVMKSVGYGEVDIIENQSLKTWNGELSFDGSETFEHEGMHWAEYKIVLHQPITIEESKQVRRILNENAPARCHLVAFNFTRAGHRWDGNIKFDGNFTFGEV*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0008	shell	direct	high	566	0.998	GCA_001053575.1_00087
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	4147	5061	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	4148	5062	GCA_001053575_1_6_9	GCA_001053575_1_6_9	-	168001	.	CDD:PHA02568	baseplate-assembly-protein	MSELVDLKKLPAPKVVQELSYETLLTQRKEKFLSLQESDEMRQHWQARLQLESEPVVKLLEENAYLELLLRTNINESAKAVMLAYATGSDLDQLGALFGVTRLIIQAEDLKSNPPTTAKYEDDERFRTRIQMSLEGLTTAGSRASYEFHALSTSAKIKDVDVTSPTAGTVKVAILSTEGQGTADGDLIKAVKEQLNAEHIRPLTDTVLVESAVILTYEIQATITLYPSVLESVVMGNVNQAITSYVNKQHSLGIDITRSGIYAALHQEGVQNVKLTKPMDDLIVQPHQAAYCTQIQVNLGGRDE*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0009	shell	direct	high	914	0.999	GCA_001053575.1_00088
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	5045	5395	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	5046	5396	GCA_001053575_1_6_10	GCA_001053575_1_6_10	-	168001	.	PDB:5IW9_B	Baseplate-wedge-protein	MNRFTGEKITSETEHIKQSIADILLTPIGSRLQRRDYGSRIPELIDRPMNHALLLQLAASAVMALHKWEPRVTISQFKPQLTDNGITCSIVGRTKNQNNVINYDDVWLGGKNERIS*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0010	shell	direct	high	350	0.997	GCA_001053575.1_00089
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	5395	5934	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	5396	5935	GCA_001053575_1_6_11	GCA_001053575_1_6_11	-	168001	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MSADNNRRIESIIRFGLIAEVDHAQAKARVKCGEILTDFIPFITMRSGTTKTWSPPTQGEQCVILSASGELTTACIITGLYTQNSPSHSADEHVIEFADGAKITYNQTNSDLVVTGIKTANIKAANQINIDCPTVNIKGNVNIDGKVTSTGDMIAGGISQMTHKHKDVSKGKDKTGEPE*	common_virus_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0011	shell	direct	high	539	0.998	GCA_001053575.1_00090
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	6048	6479	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	6049	6480	GCA_001053575_1_6_12	GCA_001053575_1_6_12	-	168001	.	.	hypothetical protein	MKVELSKQFQEGRLNTPFFKDIQAMSDEELQLIFDFMQSIEQGKRLSGKNKPSWLDDNLNDIPNTEVYKQNEIWHYHCGPYNKGSRYSPMSGLKMNLDGETSGPVIHYQKISDEHIVIIAFSPQHKPFPREWDKPNPIIDRTE*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0012	cloud	direct	high	431	0.998	GCA_001053575.1_00091
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	6488	7045	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	6489	7046	GCA_001053575_1_6_13	GCA_001053575_1_6_13	-	168001	.	.	hypothetical protein	MTNLSLNPIFESFAPIFKQLKTAAMSALFIAPLAINHPVRHTTHTVNIFSVQTNENKSINQQDIEKIIDMVTAVSAITDFVIASITAESLSYIDLDDVLRLESKINKYDDLANNIMANNKSPELSTTLQSFSNKMHTLCNMMKSEKYKQESDEVVLSRIYRTPEDAGYTYKSSDSFDDFKKAVMM*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0013	cloud	direct	high	557	0.998	GCA_001053575.1_00092
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	7150	10017	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	7151	10018	GCA_001053575_1_6_14	GCA_001053575_1_6_14	-	168001	.	PFAM:PF10145.8	minor-tail-protein	MNNLQLSVLLNAIDKMSAPVRNASKSVRELSAKLRENKNAQRQLAQQNKQHAEAMKQYASTINPLKAKLSSLNNELSAAKQKAASYSQYLKNAKNPTEGFKKEVEKARGAVKKLKQEQVAASNKLQQAKLALSQAGISAEKLAQNQRNLQRNTKAATDQIKHQEEALKKLNAKQEAYNRYRGQVEKLKDISGKAQIIGAQSMAAGATITAPIANVTKDFMTFEDAMIGVARQVDGLKDKSGNFTQEFDQWKIKIHDLSKELPLTTVQIANMIESAARMDIAKDELEDFVRLNTQMAIAFDAKNPDELVESFGKVSKNFNLTQKQTKELADTINYLDDNAISKGTGIIGYMNRVAGIAAIAKITDKNMAALGSTLQTLGAEEEDSATAVTTIFTRLGVAGNHEEVDGALKKLKLNPQKIAKGMAKDAQSTLMLIVNKIKGLDDDAKSDVMKGLVGIPHIKTISKLVANTEEWRRQIELANSEAAKGSMGREFDTRMKALSASTQIFTNRLFNLKTAIGGTLAPTLHNILDKLGGVVDKFKAWIETNPELARKILLVASALGTTLTAFGALSLALSFVLYPMARVALGFGKLTGLNTLLAKSFNYTTKAAIASNKNLLSFRGWSNVFSSAQTTLTGLLGKITKLNTLKVLLGALKAWTMPVRMIFIGLSSSISFLLSPIGVVVAAVVGAGIYIYKNWEKVKSFFSGFLNGLQSGLQPVIDKFKPFVGWIESVFNWFTNLLSPIQSTKEDLDAAASAGKQFGEWVAFGIDLALKPLQLLIDGVKWLIDNLPKINEQNQKAKALKEETMKAAFGNGVLGQTMAAMADIPEYATGGYTGNGGKYQPMGIVHGGEYVMTKEATNRLGIATLNALNYGKQALIAGGLGIGLATAAPIQVDSRPPISARPSISQTMQPMAVNITINAQAGQNERQIAQLVAAELERINRQQQARARSRMTDRA*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0014	cloud	direct	high	2867	1.0	GCA_001053575.1_00093
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	10094	10339	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	10095	10340	GCA_001053575_1_6_15	GCA_001053575_1_6_15	+	168001	.	.	hypothetical protein	MSLILALIGIPLFIGLGLFFTGCLTFAAISAVFSMATVAFVPIISLIFVLWLITDSVILSILFTLIFGLIVLAANNTKTNI*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0015	cloud	direct	high	245	0.996	GCA_001053575.1_00094
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	10349	10807	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	10350	10808	GCA_001053575_1_6_16	GCA_001053575_1_6_16	-	168001	.	PFAM:PF05069.12	Virion-morphogenesis-family	MATVEEVQAKLTALINNLSPQARRQLARNIGQALRKNQQARIARQENPDGTAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARYFKIQSNANEVSVGFNGSSAMIAKVHQYGLMSSPSKTKDFKVRYAQRELLGFSQSDLDVIEDLVLAQLSM*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0016	shell	direct	high	458	0.998	GCA_001053575.1_00095
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	10807	11289	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	10808	11290	GCA_001053575_1_6_17	GCA_001053575_1_6_17	-	168001	.	PFAM:PF06891.10	tail-completion-protein	MKKPNQLRKILEQSHQDFVKNPDRLQLYVDGGQVVATGSTSLSFEYRYTLNIIITDFAFDIASLIVPINAYLRKNQPELFENPQRRENAFKFQLDYNNNNTADVSFEIQLTERVVAKQVGENVQMTYATEPTAPEWETLNTLKVYLEKIDDEHLIFKGGE*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0017	shell	direct	high	482	0.998	GCA_001053575.1_00096
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	11286	11501	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	11287	11502	GCA_001053575_1_6_18	GCA_001053575_1_6_18	-	168001	.	PHA00080	DksA-like zinc finger domain containing protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDIPIPEKRRQLIQGVTRCVDCQQKYEMQQRNFRK*	mmseqs_cdd	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0018	shell	direct	high	215	0.995	GCA_001053575.1_00097
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	11498	11716	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	11499	11717	GCA_001053575_1_6_19	GCA_001053575_1_6_19	-	168001	.	NF038368	Rz1-like lysis system protein LysC. LysC is an Rz1-like component of a phage lytic system, substantially overlapping although not fully embedded in the gene for the Rz-like LysB component. The phage lysis defect in the absence of a functional LysB/LysC system is appears in the presence of high concentrations of divalent cations.	MMLAACSTTPKIIKQPILCPQVAECTPFAATIKTNGDLANAYLQSQQKLRVCIVENQALKKCIDEFNKQEKQ*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0019	shell	ambiguous	low	40	0.183	GCA_001053575.1_00098
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	11676	12026	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	11677	12027	GCA_001053575_1_6_20	GCA_001053575_1_6_20	-	168001	.	PFAM:PF10828.7	Rz-like-spanin	MFGFLTKKEKYILLVGPLMLVAIILFQGWQANHWRAEAAKEEQLKQQWEASYVALNESVDKFNEQQKALTEAVNQLKISQTKQTQDLKNALKKHQDWADTFIPDDVSGVFNNSENH*	phrogs_hmm	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0020	shell	direct	high	350	0.997	GCA_001053575.1_00098
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	12011	12529	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	12012	12530	GCA_001053575_1_6_21	GCA_001053575_1_6_21	-	168001	.	CDD:cd16901	P1-lysozyme	MIKRSAKYACSVVAIVGLALSLHGNEIRTSQKGLLLTGNAEGCQRVPYNCPADVLTFGLGTTDAVEKVIPHKVYTDEEIANAFTKGIKQAEKCVNTYANGQAMPQGAFDALVSITFNAGCGNLKNSTLFKMARKGYSKAMCGQFERWIYANGVPLKGLIERRQKEKALCLGS*	common_virus_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0021	shell	direct	high	518	0.998	GCA_001053575.1_00099
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	12522	12743	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	12523	12744	GCA_001053575_1_6_22	GCA_001053575_1_6_22	-	168001	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDTPSRASYISGLFAFFIGRIADMFSNVNWADVASVTGIVIGVATFLVNWYYKKKDFELKEKELNQRNHHHD*	mmseqs_cdd	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0022	shell	direct	high	221	0.995	GCA_001053575.1_00100
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	12745	12954	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	12746	12955	GCA_001053575_1_6_23	GCA_001053575_1_6_23	-	168001	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MEVYAQQNDNLDAILYRYFGRSEGLLEIACELNPHLMDKPVIPIGTPVILPETDTEKISVASDTIQLWS*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0023	shell	direct	high	209	0.995	GCA_001053575.1_00101
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	12954	13460	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	12955	13461	GCA_001053575_1_6_24	GCA_001053575_1_6_24	-	168001	.	PFAM:PF05926.10	head-completion-protein	MSDGSLSVKLAPDYEMGAVQKQLEDYGTGEDIIRNDDFFPDISLSAFRNQYRADGTVTEQRLQDALIEAIASVNDELSIFKAQSEHHFLEQIPAPSINGESVLIYRYKRAVNCLALANLYERYASYDSTNDGEKKMDLLKDSINELRRDARFAISDIIGKKRVDAELI*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0024	shell	direct	high	506	0.998	GCA_001053575.1_00102
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	13582	14232	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	13583	14233	GCA_001053575_1_6_25	GCA_001053575_1_6_25	-	168001	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEVSAAIANAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKAAFKKQILPDYLPWITGALSAGTGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTVLAEEFADQAKTAQAANQPFEVSYLEQVQRITAECDMPDESRARLLRELGLLLVEKNPEQALQYLERALGLDQKVGVKGDIKKLRKKLSKADE*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0025	shell	direct	high	650	0.998	GCA_001053575.1_00103
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	14238	15272	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	14239	15273	GCA_001053575_1_6_26	GCA_001053575_1_6_26	-	168001	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTQQKFQAYIAGVAQDNGEDVAFVANGGQFTVTPTMQQKLENAVLESSDFLKRINVVPVTEMKGSALRLGVLSPVASRTDTNTKARETTDIHNLQENLYSCEQTNFDTHLNYATLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSVAATTNRATNPLLQDVNKGWLVQIEEKATQRVMKEAKSGTGKIEIGESKEYKNLDALVFALKEDFIPDQYRDDTKLVAIMGSDLLADKYFPLINQSKPSEQAAGDAVISQKRVGGLQAVTVPYFPKGTVLVTSLDNLSIYVQEERMRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITVLDAPTHA*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0026	shell	direct	high	1034	0.999	GCA_001053575.1_00104
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	15294	16115	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	15295	16116	GCA_001053575_1_6_27	GCA_001053575_1_6_27	-	168001	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKKSKWVIVATEGATTDGRTIQRNWIEEMAESYDPKNTYGARINLDHIKFSIYLPELANAHCFGDVLAVKAEEREDGKLQLLAELQPTDALIALNKDGQKVYTSVEIDTNFADTGKAYLVGLAVTDNPASLGTEMLSFSHNGLNARKLKADNIFSAAIETELDFEGWNGDEHQSVFAKIKALFAKKEKSDDERFSDQSSAIELLAEQQKEILEKLTALHGDFANQQAEIEEMKASNEEIHATFEELKQKPAQAENSRPLVYGEEPETDGRFF*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0027	shell	direct	high	821	0.999	GCA_001053575.1_00105
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	16284	18059	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	16285	18060	GCA_001053575_1_6_28	GCA_001053575_1_6_28	+	168001	.	CDD:PHA02535	terminase-ATPase-subunit	MDEQVINQASPDVTAEIKRKAQQMYFSGYKIAEIARQLDIAASTISSWKDREKWDDVAPVGRVELALETRLNLLIAKEEKSGADYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEQNAIDQEQEELLINGFLDGMFNYQRVWHKAKENRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNKNRAKADKVEIDISHENLKSGKLCADRQWKQIVSIYDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNTSAFKFADLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALAIIAPPKVEGGDYRVLHWQTFHGMDYEAQASRIKSFCDDYNVTRIVIDKTGMGSGVFQEVKKFYPMAIGLDYNADLKNEMVLKTQNLIQKRRLKFDGNEIITSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLNGDVSSNQPTIFTFE*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0028	shell	direct	high	1775	0.999	GCA_001053575.1_00106
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	18069	19079	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	18070	19080	GCA_001053575_1_6_29	GCA_001053575_1_6_29	+	168001	.	CDD:PHA02536	portal-vertex-protein	MSKKTKKSTALSTGNQAQAFSFGEPIPVLDRAEVLNYFESVLMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYIEKVENTFGKVIALKSPLAKYMRVGVKKGIFYQIVNGFDEYEFPKDAVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRRKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAVAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWVGEEVITFTEYKLLQ*	hallmark_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0029	shell	direct	high	1010	0.999	GCA_001053575.1_00107
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	19760	20338	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	19761	20339	GCA_001053575_1_6_30	GCA_001053575_1_6_30	+	168001	.	pfam02525	Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	MNILLLDGGKDFGHSHGELNHTLHKKAKEILTALGHNIKETVIDAGYDVEAEVEKFVWMDAVIWQMPGWWMHEPWTVKKYIDEVLTAGHGKLYHSDGRHRVNPTEGYGTGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGVDALYMHFHKLNEFIGLTRLPTFLCNDVIKNPQVEQYLADYQAHLEKVFG*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0030	persistent	direct	high	578	0.998	GCA_001053575.1_00108
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	20546	21511	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	20547	21512	GCA_001053575_1_6_31	GCA_001053575_1_6_31	+	168001	.	pfam20279	hypothetical protein	MYQYCDLDDSRFENLVVAICKKILGEGTQGFSVGTDGGKDGEFCGKANSYPSEQEPWEGLTIIQAKHTQGINKHFTDPDFYSENSESNVLAKEVIKIKKMVENNNIDHYMLFSNRSLTGGAKPKIIEYIAKNTGLNSYDIGIFGIDDLNYYLDCYPHIVNMRSINLEPLNIAPTINLNELSEVIGQFSKVFEDENVQKELLPTIRTSYKEKNKLNNLRDETAKELEKLYMKYIFQIDQFLKDPQNYQVLKSYQESIEEFQLQYIIPKQIELDYFDCIYNELVSYLTSRDYVLSKNRRLTRMMVFYMYWNCDIGKSNDNSSE*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0031	cloud	direct	high	965	0.999	GCA_001053575.1_00109
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	21492	21737	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	21493	21738	GCA_001053575_1_6_32	GCA_001053575_1_6_32	+	168001	.	pfam20295	hypothetical protein	MIIRPSKHNDPDKTLIYATFLILKKLKNKKIMPYEELLSFIKKEIVSGEYLFLPALSFLFLLGLIDYQAKTDMIEYIEQKQ*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0032	cloud	direct	high	245	0.996	GCA_001053575.1_00110
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	21734	23518	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	21735	23519	GCA_001053575_1_6_33	GCA_001053575_1_6_33	+	168001	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MKISKLYSNLSKKFNEIIFNERLNFIYGDVKHPKNHDLDSHNLGKTTLARLLDFMFLARKHKEHFLFKNEEVFEGFIFFLELKLSSGKYLTIKRGVKSNTKISFLLHDEPNQDFSSLPEVKWDYYELSFDKAKDYLDGKLNFTAIKSWDYRKLIGYLIRTQDDFHQVFQLQKYRGGKDIDWKPYMADLLGFNGELAKQRYQLDKQVSDLENKIKEQKIDEKSALEALSKTDGRLLLRNNELTQLTGLVEKFNFREIDNKSIERLVSEIDDKIASLNMKEYSIKNNIYHLEQSFSNSKIKFNPDDVENLFNEVQILFPEQVKRDFEQLIDFNNAITKERNSYLKQELQENQSELIKIQEELTKLNDERAKQLEFLQESELINKFRKSNRQISIVQAEIIDLEKQKENIQKVLELQKQKRDLQLALNDIQDRMVLNVSQVNNSTESVFSKIRIYFNEIINAVLKKDGELFVSLNDNSNFEFKAEYQESGKNTNESQGNTYRKFLCIAFDLAVVRAYLDKEFPKFIYIDGVFDGLDDRKKELLLKVLREYSNLGIQIIATTINSETQGMETSIMENEIVLTLHDDGQDGRLFKMPIW*	common_virus_hmm	common_virus	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0033	cloud	direct	high	1784	0.999	GCA_001053575.1_00111
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	23967	24194	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	23968	24195	GCA_001053575_1_6_34	GCA_001053575_1_6_34	+	168001	.	.	hypothetical protein	MTGLVRITVPSWRINDSVLSQLLTALAPYPELIIDWRDDMSKLDAVTHRVDIGLRIGLQPDENLLLKKSPILAMY*	.	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0034	cloud	direct	high	227	0.996	GCA_001053575.1_00112
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	24248	24598	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	24249	24599	GCA_001053575_1_6_35	GCA_001053575_1_6_35	+	168001	.	5Z72_D	CcpC	MAERYPFAGQINLSTGRAWHFLINSEQVLNPRRINFLSTDLYSYLQAVLQGKSAGMLSDFLCEPYLKSEQLVRLFPEVEIQKWQLFLYRPYETVTPPRVLKVFEILEGILKKEFER*	hhsuite_tools	hypothetical_protein	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	24671	25624	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	24672	25625	GCA_001053575_1_6_36	GCA_001053575_1_6_36	-	168001	.	COG4977	Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain  [Transcription]. 	MNTPTVALIVYEQMMPIHFAMAYSIFSMSDLNGKPLFECKIVSDSDNLTNSLFHIHLDGGLEWLESADIVVMTGWHDTQVIPSEALLTALRQAYQRGATVVGLCYGAYVLACSGLLNGKKATTHWLGDSDFTSRFPQVKWDLNPIYLEQDRLITSAGTAASMDCCLSIVRKLYGVKIANHIARILVIPPHREGGQAQFIERPISRSTPNHNINALLAYLNENLTALHSTDSLAERLSMSRSTFTRHFRKATGMSLNQWLIEARLQRARELLESTDLSITDIAEQSGFHSDTALRQHFLKKHKISPNRWRKQFQIEDI*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0036	shell	direct	high	953	0.999	GCA_001053575.1_00113
GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote	cenote	CDS	25761	26633	GCA_001053575.1	JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575.1_JVSL01000011.1	GCA_001053575.1|JVSL01000011.1	GCA_001053575_1_6	GCA_001053575_1_6@C0	25762	26634	GCA_001053575_1_6_37	GCA_001053575_1_6_37	+	168001	.	COG2220	L-ascorbate metabolism protein UlaG, beta-lactamase superfamily [Carbohydrate transport and metabolism]. 	MNLKTLISTTAFAISANTFAVDLASKNTDSYQHIRNATGRLNYAGKTFLIDPMLAEKGRYAGFEGTLNSHLRNPLVELPMKAEDTFKDVDAIILTHTHEDHWDEVAQKILPKSIKIFVQHERDGDLLKEQGFTNITSLSLEKSVEFEGIILNKTGGSHGTTEMYAVPQLAEILDEAMGVTFQAKGHPTVYLVGDTIWTAEVNKAINRYKPDVMIMNTGDARTLAFPNDGIIMGLQDVAHARQMLPNTKLITVHMDAVNHMSVYRKDLRQFVQANKLENIAIPEDGETVKF*	mmseqs_cdd	nonviral_gene	C0	26634.0	0	26634	GCA_001053575.1|JVSL01000011.1@region_1_26634@tool_cenote_CDS_0037	shell	direct	high	872	0.999	GCA_001053575.1_00114
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	2	466	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	3	467	GCA_001053575_1_7_1	GCA_001053575_1_7_1	-	45904	.	PFAM:PF08400.9	minor-tail-protein	MTFQANISEFAEFMGTEIKRIEKKIPDGSGGGQSSDSTIITGNGRPDKPETTGGKITGNEPNGTFYNSTNGAGVGAYLWQKQNGQWTVISGDTGIRRLSNISVNIKEGAIHLRRVNNRVECSFYAGRWDTISFYGSSNPKFTRKNHAKRMDILPP	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	466	954	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	467	955	GCA_001053575_1_7_2	GCA_001053575_1_7_2	-	45904	.	PFAM:PF13884.5	tail-fiber-protein	MASQEITTVLTEFAEFLGQEDKKHKTAIGNLDDLTTEQKTSLVVAINELKQSITALSGSSAGINDSATGDSSTLSAKKILELLNQAKTEAKSEILGGNVAAELDTIKELADALNGMKTGEDGLNKLIQKISQVNEALTTLNQKFTALDGVNLKEAYTRGYNK*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0002	cloud	direct	high	488	0.998	GCA_001053575.1_00248
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	1090	1437	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	1091	1438	GCA_001053575_1_7_3	GCA_001053575_1_7_3	-	45904	.	.	hypothetical protein	MGENMENIDLDIVRGDDDGWSFELLEDDESQSDLTGSRFDMWIKPKKGELIKLSTETGEITVNQNIVTVTISHDKTQQAKWEFATWDLQCTSQQGLVQTLAGGGFTLIHDVTEAE*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0003	cloud	direct	moderate	336	0.966	GCA_001053575.1_00249
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	1489	1815	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	1490	1816	GCA_001053575_1_7_4	GCA_001053575_1_7_4	-	45904	.	.	hypothetical protein	MKYITKQIEDVRTGSVAEHHVVTGLQVDYVNNSTFVTIASYVSKAKKDEGKESLSVNTFTIQAVPDWDRIPYEWALNELVKAQPEDFTPETYIGYVNPYMFAGGKVKE*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0004	shell	direct	high	326	0.997	GCA_001053575.1_00250
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	1824	6002	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	1825	6003	GCA_001053575_1_7_5	GCA_001053575_1_7_5	-	45904	.	PFAM:PF13550.5	tail-protein	MGGKKQGSARTPHEAPDSLRSSQRLRAIGLISLGPIKGPANKWKSTYFDNTPIQNANGVDDNDESSFNFKNTEIAYTLGTQDQMPLQGFEMSEREVSVGAEIKNVTPVTRTVIDPDVTRLRITCGVSALFSQNDNGDTEGTSVSLEILINGLPRAVKNISGKSSSRFYRSYIIDNLPPKPFTITVKRLTADSKSQRLQNGTHWVSYTEIIDTKLSYPNMALIGIKTDSRYNPNFPNVNLLLYGRLVKVPSTYNPETRTYAPGIWRGDWKEEWTDNPAWIFYDLVTNSLAGLGKRIGEYGLDKFQLYQIAKYCDELVDDGYGGKEPRMVSNLWITEQRDAYNVLSDMASVFRSIAVWNGTQFSAIQDRTSDPVCLYTQSNVVDGKFSRQFAAGKTIFTAVEVEYADERNFYQKAIEYVADDLMIARYGYNVKKITAYGCTSRGQAHRYGKWVLETSRLEQCTITFVVGRQGLLHLPGDIIEIADNDFAGKTLGGRVVAINGKTVTLDQPVEITGNSYLSYLNDEMQLVKIKIINVDNTNKSVVTLETNPVGLNVMDDWVLKTPQVSTQLYRALGITENDDGSYTITALQHEPQKEAIVDGSASFVPVVSTMHNGLTKVTNADVVYSADGIKLTWSVPTTDTLLTYEVRLYRNGKVFKTYLNLKNPEISFEGLPDGSYTAEIRAKNQSGQLSDPVTRSFEINLNIPRFVTKSLLFAIELDWDLPKTFTPGFSTEIWRSNTNDISSAVKVATLPYPQSNYVINGVPLSTGYYFYLRGVDKQGNKGEFTEAVFGEADHNPDNLLNALEGKITKSQLGQELINSIKADINNAVGEEAKTRQTAVAGALAQIAAQAQSSGTAIKNLEKADQAQAETIKTVTAKAESALSGITAVREAQAQSDKANAQQINALTAKVGNAESTVSQASSVVAELNGKVSSMHTIKTQAIAGGRTAVAGIALGANHEESSVIVMADKFGIVANANDGNVKPVFSVADGQVGIRGDLVVAGSVTRDKLSSGSGANLFYNPIFANPTNGVPDGWTASEANIPGDKRGERICRQDEDYGLGKGGYLKNENVLRWHNKITGNPNTRCGIYQNVPVSADKWYMVSAYMGNHSCSKVEIYIDVRGKNGEWLLHKTDEVSSGYGFRGINNAKRAFIKFKIPPNGVSVDVFFFFYDGNGANPNGAWMFVARPMLEECTEYATQPSPWNNAGLTEVHGGSIIANTIRGDHIQANQEIRAPRIIGGVITGNTVNGATINGGTVNGTTVSGGTVKGSTIEGGVIKAARLEGVTGKFTGTLEVNQLVGGNLCEVFVANVYQVGSSYQSRIRIAPSPVKRIFFIVNSHNTFTVEANQSHEYYYFYTDSKIPPELFNIGYGNKNPAKLCITAYAVSNTTTMTQL*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0005	shell	direct	high	4178	1.0	GCA_001053575.1_00251
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	6069	6569	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	6070	6570	GCA_001053575_1_7_6	GCA_001053575_1_7_6	-	45904	.	PFAM:PF06805.11	tail-assembly-protein-I	MSGLITQVQGLRSHLSKGYYKVRIGRKYISNEQLKNNPIIDLDDKSSVHFTPVITGAGKAAGIIQVVVGVVLIAVAWWSPAGWSAGGIMIAGAMGASLAISGAISLLTRPPDMGSGANESEKKQSTSFSNLRNLTPQGRPIPLLYGKMMTSLILVSQGIETFDDHQ*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0006	cloud	direct	high	500	0.998	GCA_001053575.1_00252
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	6587	7357	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	6588	7358	GCA_001053575_1_7_7	GCA_001053575_1_7_7	-	45904	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MIIPDKLKKEILSHAKSTEPQECCGFVVFKDGFSYIPCENISHDPVNFFEISPDDFILAEERGVIVALVHSHPDSAFEKGLPYLSIADRECQVRTLLDFWLVVDDDIKQFRAISPLIGRQFENNKQDCRNIILDCYMLAGIELPDQSTYEFEWFEHSNLYEEGLARCGFEKIPFDEEPQLGDVILIKVGASFANHAGVYLGDQMMVHHSESRLSARVPYDGFWLNSTHSIWRHSEWQKLHFMAILNDLAMNHSSLM*	mmseqs_cdd	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0007	shell	direct	high	770	0.999	GCA_001053575.1_00253
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	7360	8073	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	7361	8074	GCA_001053575_1_7_8	GCA_001053575_1_7_8	-	45904	.	PFAM:PF05100.11	minor-tail-protein-	MTALLPELEQGALIELWDIDLRHITPTNGSNTAGELYRFHNGLNQGRTNIWWQGNEYQAYPIKADGFEISGQGPSSRPTLTVSNLYGIITGIAVNLGQGVGGKVTRRLVYAQFLDARNFDGGKNAQADPTQEAVSYYIIEQLKSLDDKQATFELASPAETDNAKIPLLMITSDVCIWQYRSPQCGYTGGPVADEFDKPTNDRKKDKCSHCIRGCKLRFGENAVLPFGGFPSTTQYGN*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0008	shell	direct	high	713	0.999	GCA_001053575.1_00254
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	8098	8433	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	8099	8434	GCA_001053575_1_7_9	GCA_001053575_1_7_9	-	45904	.	PFAM:PF05939.12	minor-tail-protein	MALKTLPWCPQPGYTVDEEPKRKVLNFGNGYQQRMEDGINALLRKYSVTYKVKNSQSAEFRQFMKEHGGVRAFYFKDVALNGELVKVVCVKFPRQIGLTYTTFNCEFEEVV*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0009	shell	direct	high	335	0.997	GCA_001053575.1_00255
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	8443	11874	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	8444	11875	GCA_001053575_1_7_10	GCA_001053575_1_7_10	-	45904	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MRAFFISGENMSSLGSLYIGLSLDTVQFQNGLSKSEYQTRKFTRQFEANFSRAQEKARQFSERTTQYLNNIEKAANNINSTTKWSFRLDNLGRAQDLSKQAIAMMDSYTELQNRIRLVTHSQTEMAQATESVFDISSRTNQAVGATAQIYQRFAKNADTLNISQQKVVELTETVSKAVALSGAAQASSEAALMQFGQALASGELRGAELNSVMEQTPALAQAIADGLGVSVGALKDMGKNGELSINKVITALEKAKSSVDSDFEKRVKTLSMSYTNLETSFIKYAGEADRTYGITQKLGESVDFVSKNLDQLITAAVVLTGALAVGRISQYSAELAKSGIISAKNALAHTAEAKSIYERATAMRVAAQLEMSSLTAQLQLAQSEQTRFALRERMKVQSAQIIALAEAEATAKRNLATATNLATMAAKGLQSVMALLGGPAGVIGIAATSLLFFSSQAAEARQWALDTSVANQALAESYDQITEAALSLKITKQLEDIEKYYAEIEKLKAGIATKQVGADFDGISVGGNANDAEIESLKNKIQVIKENADIARQSLEKMLSPLGEKMLRAGKNVDEVRQKFKLLGVSAETADNIIANLPKSFNDTANSANKAADKTLDLKDAMEKLKEKSTSLAQKLEVAKLKQQGQAKSAYVLAGLYELLGNEGAEYNEVLIGIATGTITAANAADKAVGLSLETLNKILAGKATLEKMFSDETKVTTIETQIKESNKKSGGRKSSGENARDSWLSFYDEIRKKSSSSLAEIDLEQTRMLQRLEEHNKKGVVSHQEYETAKTAITERFARQRLELAGKYAPEKLLRANLNDELAIVEELKKAGQLTGGEANTAELQLKFDYAQNRSQSAVNPLDQLRALYDPQQELINQQTQELAQLQAFNDQKLITEEEFQQRKQQIIEKYRNSQFQEQMGLYATGLNDLGSAFGTLTSVVEQSAGKQSAAYKAMFAVSKAFAIAEATVKLSQAVVQAMADTTALTPAQKFANMAAVAAAGANVISQITSVGFAKGGHVVGEGTGTSDSILARLSNNEFVMTSRTVNHYGVGFMNALNQRRFPKFANGGHVGGKSDSYDGLFSGGGASTNNEVSITINIDKNGNESVTAEQKAAQGKELALAIQANVLEVLRKQRRPGGMLG*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0010	shell	direct	high	3402	0.991	GCA_001053575.1_00256
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	11902	12165	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	11903	12166	GCA_001053575_1_7_11	GCA_001053575_1_7_11	-	45904	.	.	hypothetical protein	MFKDEVKLIHWLGKEVIAFFALFFVLPIIFILAVTGITTKILLGVSLAYITFFVFAKVAMFFFMKKTENEVLQQIEKENEVKYVIIK*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0011	shell	direct	high	263	0.996	GCA_001053575.1_00257
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	12258	12518	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	12259	12519	GCA_001053575_1_7_12	GCA_001053575_1_7_12	-	45904	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MGKTLEEIEQMPEKHLQEYMLFYQEQPFGLWRDDYRTAQIAHLLALIHKDPKQKATTLNDLMPFFNENKASEDKEDDGVESYLLNR*	mmseqs_cdd	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0012	shell	direct	moderate	204	0.782	GCA_001053575.1_00258
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	12533	12940	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	12534	12941	GCA_001053575_1_7_13	GCA_001053575_1_7_13	-	45904	.	PFAM:PF16462.4	tail-assembly-chaperone	MDLRNKLLQHKPKVTEIEILGEKYYVRALSVGDVNRGLFGQHKLLCDIAKAQGIELDYDDPDELGKQLGKVYDPYRLARNLALRLCDKDGNLLFDFENEDDLKALSSLDNEVSEELSRALMGDEPKNLMTDASSK*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0013	shell	direct	high	407	0.998	GCA_001053575.1_00259
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	13054	13707	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	13055	13708	GCA_001053575_1_7_14	GCA_001053575_1_7_14	-	45904	.	PFAM:PF06199.10	major-tail-protein	MAAKTTPFQKTRFYIGTSEDAGKKITACAVTPNATITIPSSGFKTGDCVLVTGLGALDGYYPVKSVAADVITLADEVDWSAYDQPTVFTDAKAALVKWSNNFCELRNLERSEDTLTEEDVTTMCDDGKATEAGEFEYGETQMKFFTAPTSEMQKLCRKKFFSKSKFPFRLVFPNGQGTMYGTGYFKSGNGYSGETMGKFESGATIKHTKQEYHLPVA*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0014	shell	direct	high	653	0.998	GCA_001053575.1_00260
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	13711	14055	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	13712	14056	GCA_001053575_1_7_15	GCA_001053575_1_7_15	-	45904	.	PFAM:PF05657.10	tail-component	MIQKKLFNALNPLVSGRCFYGLIPETNSAYPVIVYQFPTISPNSALEDGDLDDFTVQIDVYSKNPDDIFALRKAIFTALETAFDYAERESDFSDYEPDTKLHRRVITYQIAYGE*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0015	cloud	direct	high	344	0.997	GCA_001053575.1_00261
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	14052	14534	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	14053	14535	GCA_001053575_1_7_16	GCA_001053575_1_7_16	-	45904	.	PFAM:PF04883.11	tail-component	MSNLTVKVTGLKELGKKMNDLGKKTKGRISVDSMRKGAVIIRDKARANAPTLQEKVPHRKRGTLKRAILESTKVDKFGNVRSKIYVRKLRSKTIENFKVKTGKGGAKNPNDPYYWRFIEFGTSKMQARPFLRPAFSTKKNQVSREIINNLRNNIFREAGK*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0016	cloud	direct	high	482	0.998	GCA_001053575.1_00262
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	14527	14850	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	14528	14851	GCA_001053575_1_7_17	GCA_001053575_1_7_17	-	45904	.	PDB:2KZ4_A	Head-tail-adaptor	MNIGKLRHRITLLRQVNEVNDYGASTQTWKRVATVWADVRPLSGREYFSAQQVQSEVTTQIWLRHIEGIKPTMKVKFGKREFEILSVLNTQERDVSLQLMCKETGNV*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0017	shell	direct	high	323	0.997	GCA_001053575.1_00263
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	14860	15180	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	14861	15181	GCA_001053575_1_7_18	GCA_001053575_1_7_18	-	45904	.	CDD:cd08054	Head-Tail-Connector-Protein	MEITLDEIKLQCRIDNDDEDDLLSAYLVAAKAMVENHTNRVLFNTLPEEKPINAQEITGDLKIAILMLIAYLYENRGGWNEGQGVTNFDLPPTVKAIIERYRFIDV*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0018	shell	direct	high	320	0.997	GCA_001053575.1_00264
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	15227	16432	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	15228	16433	GCA_001053575_1_7_19	GCA_001053575_1_7_19	-	45904	.	PDB:6TSU_J4	Major-Capsid-Protein	MAKLHELQEKRRNIAAQMRQLNDEIGEKTWTEEQRTKWDAMKSELGGVESQIEREESLRSTDALFVEEQRQIETESKPVIDVEVKRSQAFNSFLRRGLGELSQEERQVMAELRAQAAGTDNKGGYTVPKEMQARIVEQMKAFGGIANVAKIINTADGRVIAWATANGTAEEGELVGENAAATELDTDFGTAELGAKKLSSKIIRVSNELLQDSGVNIEEYLSGRIAERIGRAEAKYLIQGTGVGSPAQPKGLQTAVTGVTQAAAAAVAWQDFNALIHSVDPAYRNVGNTRLAFNDNTLKTLKEMVDGQKRPLWLPDVAGVAPATILGHQYVIDQGIEDIGSGKKFAYFGDFSRFIIRRVSGMTLRRLVERYAEFDQVGFLAFHRFDCVLEDVSAIKALTGK*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0019	shell	direct	high	1205	0.999	GCA_001053575.1_00265
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	16499	17143	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	16500	17144	GCA_001053575_1_7_20	GCA_001053575_1_7_20	-	45904	.	PFAM:PF04586.16	prohead-serine-protease	MRQNKQIINKRRTQMSDVEKRSYAGEVRAESRDDEPTHIIGYGSVFNTMSEVMWGFREIIMPGAFDDVLEDDVRGLFNHDPNFILGRSKAGTLSLSVDETGLKYDIIAPDNPTIRDLVIAPLKRGDITQSSFAFKIARNGDEWYENDDGVIIREIHKISRLYDVSPVTYPAYQEASSTARSLEAWKEARDSGTIAKAVSQKAARERFLSLINAK*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0020	shell	direct	moderate	603	0.935	GCA_001053575.1_00266
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	17094	18308	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	17095	18309	GCA_001053575_1_7_21	GCA_001053575_1_7_21	-	45904	.	PDB:8CEZ_K	Portal-Protein	MIFDKLFSTRSLENPAVPLSAESAYEEIFGMQPTKSVSPDLAMKLSAVYACVYVLSSSVAQLPLHVKCKSGDKVETVKDHPAYYLLHDSPNAWQTSYKLREYAQSSVLLYGNAYIHIVRDKNGGVVSLESLEPWKVQLLKNGSRYVYAYYGDDKTMSLSPDDVLHIKSLGPSIKTGKSVIQTHAETIGLGLDARKFASGFFGGNARPAGILSVKTPLNSNAWENFKKMWQTAQEKLRSEENKTILLPAELDYKALTVSPVDTELLSMMKLNRSEIAGIFNVPAHMINDLEKATFSNISEQTIQFIRFSVMPWVVNWEQELNRKIFTEAERKAGYFVKFNLAGIMRGTAGERATFYHAAITDGWMSRNEARQLEDMNPVEGLDEMLVSVNAAKQANNKQTENTNE*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0021	shell	direct	high	1214	0.999	GCA_001053575.1_00267
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	18305	18457	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	18306	18458	GCA_001053575_1_7_22	GCA_001053575_1_7_22	-	45904	.	PFAM:PF06341.10	membrane-protein	MRTVILDLLGLTGFGLMSYGVYLKYGADIALIGSGALLLLLTILASRGKQ*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0022	shell	direct	high	152	0.993	GCA_001053575.1_00268
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	18454	20160	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	18455	20161	GCA_001053575_1_7_23	GCA_001053575_1_7_23	-	45904	.	PFAM:PF03354.14	Large-Terminase	MTDNVKKAIKYAKDVIAGKIPACRFIVKTCQQFIDDLENQSAVKFPYYFDEVKAEKACKFIQYLPHTKGEWASKRQNITLEPWQLFIMANTFGWLRKSDNLRRYREVYVEVPRKNGKSAISAGVGLYMFCMDNEFGAEVYSGATTEKQAWEVFRPARLMCKKTDLLCSTFGIEVNASNLNRPADGSRFEPLIGSPGDGASPSCAIVDEYHEHKNDELYTTMLTGMGARKQPLMFIITTAGYNIEGPCYDKRREVIEKLSGAIPNDELFGIIYTIDEDDDWTDESVLRKANPNFDVSVYGDYLISQQNKAINNARLTNTFKTKHLNVWVSAKESYFNMVSWENCKDETLSLEDFQGDDVVLGLDMARKLDMNSLVKVFARVIDGKRHYYCIAPEFFVPEDTIYNTDTALKRVVDKYQKWVNSGHLTATDGAEVDYREIEEVIKDTNQEHRVSCVAIDPHGAIAISHNLADEGLNPITITQNYTNLSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTVPGNDDVVRPIKEIPENKIDGAVALMMAIGRIMLSTDDENFFPNEVLEL*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0023	shell	direct	high	1706	0.999	GCA_001053575.1_00269
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	20157	20642	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	20158	20643	GCA_001053575_1_7_24	GCA_001053575_1_7_24	-	45904	.	PFAM:PF05119.11	Small-Terminase	MTGIATTPGRGRKPTPTKVKERRGNPGKRKLNKDEPEFSPFNENTPPPSQLNTDGKKMWAFILKELLSQGVLLQTDLEVVTNYCIAYQNRNRACKDVEKYGTFVENGNGGLSKNPAFTVLNEALKQMTTFGALLGLDPSSRQRLIGKVDEQNHNPFAELMQ*	hallmark_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0024	cloud	direct	high	485	0.998	GCA_001053575.1_00270
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	20770	21159	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	20771	21160	GCA_001053575_1_7_25	GCA_001053575_1_7_25	-	45904	.	PDB:5H0M_A	HNH-endonuclease	MSDNTRLFLLVGTMPARIPKACRKQGCKNTTVNSNGYCDEHQGCSWQRHQKGKTSSQRGYGAQWRKIRSIVLVRDNYLCQECLKQGRFVTATTVDHITPKAHGGSDDLTNLQSLCNSCHKFKTARERLK*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0025	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	21163	21375	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	21164	21376	GCA_001053575_1_7_26	GCA_001053575_1_7_26	-	45904	.	.	hypothetical protein	MLLSSCASKPVVVSCSQLPAALTAHLDKTVFAGDTYGDVTNYAVILKRERDMCLNRIDKIREWQTEKLSK*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0026	shell	direct	high	212	0.995	GCA_001053575.1_00271
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	21350	21727	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	21351	21728	GCA_001053575_1_7_27	GCA_001053575_1_7_27	-	45904	.	PFAM:PF10828.7	Rz-like-spanin	MEFNMIGIGQYISNGFTKVLLVCSVVSAVVILALCGWIHHQSATIDGLNGKIKTHQETIAAQSQTITRLEEDAERNRQLTFELSQVESDARSKSDAVIKSIPKQVKASSAFNTSAPSNVIEFLRQ*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0027	cloud	direct	moderate	366	0.968	GCA_001053575.1_00272
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	21824	22405	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	21825	22406	GCA_001053575_1_7_28	GCA_001053575_1_7_28	-	45904	.	CDD:cd16901	P1-lysozyme	MSKLKKASAFGVCLVSVIVGLVYDSEDRSSGIIISENGARETGDEEGCRTNPYQCAAKEWTFGIGAATTGGANVIIGKTYTNEEIADQYAKDLRKVSKCIIDYYPYNEMNQNQIDALGSLIFNIGCQGSRFYLDRESGRFKKTQLYKAAIDKDFIRMCNTFPNYSRVNGKVHKSILKRRLRERDLCLSPVNKV*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0028	cloud	direct	high	581	0.998	GCA_001053575.1_00273
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	22383	22628	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	22384	22629	GCA_001053575_1_7_29	GCA_001053575_1_7_29	-	45904	.	PFAM:PF16082.4	holin	MQILKDMPVESQAYGWLTALFGAMTLSEWSILIGVLVTICGYIRESRYKKRMLELEEIRAGVRDKNGEMIQGDKDVKTQKS*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0029	cloud	direct	high	245	0.996	GCA_001053575.1_00274
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	22784	23158	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	22785	23159	GCA_001053575_1_7_30	GCA_001053575_1_7_30	-	45904	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MLDIDIIVVEFGYWATPRYETEFPRVSAGFAEMKCDERYAHKYRINPISDDLGLRIDGYLGIIRKLTPELYDVFVLTYIKRWEKQEILTYLRISKAEYFNRIKTVKTSLMLMIVSGGSECLFIC*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0030	cloud	direct	high	374	0.997	GCA_001053575.1_00275
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	23152	23508	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	23153	23509	GCA_001053575_1_7_31	GCA_001053575_1_7_31	-	45904	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTTITLELPFPPSVNTYWRRVNGKTLISAKGRAYAAQVAWMTRRSARFPAGIRAAVVVEAFMPDRRMRDLDNLFKSLLDALVKAGVLVDDSVIDDLRIVRKCVVNGGKVLVSIKELAC*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0031	shell	direct	high	356	0.997	GCA_001053575.1_00276
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	23597	24589	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	23598	24590	GCA_001053575_1_7_32	GCA_001053575_1_7_32	-	45904	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MQVLLLTPYKQSDLGLMMFRIPRNAAQVMTKRMVLMPEPTELQHKESGVVNWQGAISEEFPPLVVDFLKNKEVRSKLLTKKALMNFVASIKHCQLSDGEYCHKELTITPHLDGFIRTCWHHDTEMRKRNYDAEKASLVVEQNVEQAIIAKIQVDLKHARPLTESDLVLYCFKNGLQRLLSDALLRKVFSVKNYERDNKESSTRFEDPLIYHMDRLDKAILNLKADDDPPLQYMARPKPQYIRSEKWLRWVKTQPCVCCGKQADDPHHLIGHGNGVMGSKADDLDCIPLCRIHHNELHQNVKAFEEKYGSQIELWHKFFLYAIKIGALVVD*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0032	shell	direct	high	992	0.999	GCA_001053575.1_00277
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	24589	25218	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	24590	25219	GCA_001053575_1_7_33	GCA_001053575_1_7_33	-	45904	.	PFAM:PF06992.10	Replication-protein-P	MNVAIRQENGISGVDLNAHVSDLVNQLFNRLCAYCNRWRYNYPTDEALEEAKFIWIEELVNHDVLSVDMLERGLARVRAARNDYFPNLFDFIEWCKIPIDLPSEEELAQRLASFQRYGMADVDKFKFNSTVEYWLITDLYCRCRRYTWSVEQLRKEIKQALRNMADRLKNGEVLPEPTKQLPSQATSMPVSKTRQAEIIASIKGSLRGH*	rep_hall_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0033	shell	direct	high	629	0.998	GCA_001053575.1_00278
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	25215	26162	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	25216	26163	GCA_001053575_1_7_34	GCA_001053575_1_7_34	-	45904	.	pfam09524	Conserved phage C-terminus (Phg_2220_C). This entry represents the conserved C-terminal domain of a family of proteins found exclusively in bacteriophage and in bacterial prophage regions. The functions of this domain and the proteins containing it are unknown.	MSKFIPNSFQIPNAFVDEVMFALSGNAVKAYLLVARKTTGWQKESDFISIEQFKQFTGINRDKTIYEILKELEEVGLIRTVKTAGRTTEFYLVKDLPNVENKPVAKSATSGEKRHQLQKVPPVAKSATTPVAENATATSGEKRHPTKTNNKTNINNPPIVPPTEQVVLDYLNMALANLAEEQGERKPTGYKLTDKTKQAIGARLAEFDLGVCKRVVDYLVSKWGRDPKMVEYLRPSTIFRPTNFGEYVVGSERWDNKGRPEMRDGAWVMADGTMLKPKGSAPNPASKSTDWAKGRQIQIRNPQVAEKLRKMGMLK*	mmseqs_cdd	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0034	shell	direct	high	947	0.999	GCA_001053575.1_00279
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	26159	26854	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	26160	26855	GCA_001053575_1_7_35	GCA_001053575_1_7_35	-	45904	.	PFAM:PF03374.13	KilA-protein	MNELLPINDKNASALTMSSREITKLVNSRHSDVCKSIETLISKGVIGGYQPKPYTHPQNGQIYYEYFLNKRDTYILVAQFSPEFTAAVIDRWQELENQQNPTALLPQNYLQALEQLVASEKEKQALALENKAMKPKADFVDLYVDIGTTKSLRETAKILNMPEKAMIAALERDKALYRQSGNLIPYSDKQSRGLFTVKTGTAEHGHNFTQTRVTSKGIQWIAQRYASELML*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0035	shell	direct	high	695	0.999	GCA_001053575.1_00280
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	26905	27348	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	26906	27349	GCA_001053575_1_7_36	GCA_001053575_1_7_36	-	45904	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKKVIMEMIEKVPGGKSAVAGFLGFTESELNNRLYQTKGQRFKNEELIAIQLEYGCTQFIEELCRAAGGRFVPDTCADDLDAVEMANIQLHELSARGLLFEALERALADGEITSCEEDLIRKLLNKHLAATQHSIECVISLNKRQ*	phrogs_hmm	nonviral_gene	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0036	shell	direct	high	443	0.998	GCA_001053575.1_00281
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	27397	27612	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	27398	27613	GCA_001053575_1_7_37	GCA_001053575_1_7_37	-	45904	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MTPLQKVFSIVGGKSALAKHFGILPWAVAKWEKTQVPAERCPDIENLTNKQVTCEELRPDVNWSVLRNQQD*	mmseqs_cdd	nonviral_gene	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0037	cloud	direct	high	215	0.995	GCA_001053575.1_00282
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	27735	28436	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	27736	28437	GCA_001053575_1_7_38	GCA_001053575_1_7_38	+	45904	.	PDB:2FJR_A	Repressor-protein-CI	MNLSDRLSKLMSENPKATITELSRVAGVSYEMARRYILGTAEPRKEKLEKIAEYFNVKPSWLQFGEGQQEETKQIESNVAETGSFDLWDRNTPLNDDEVEVPLFQEIRLAAGNGFADDIMDYNNFKLRFSRATLRRQGVQYENAVCVVADGNSMEPVIPNGATVGIDTGNKTIRDGSIYAINHGGLLRIKLLYNMPNNQIKIRSYNTDEYDDEIAGLDDVSVIGKVFWYSVLL*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0038	cloud	direct	high	701	0.999	GCA_001053575.1_00283
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	28503	30095	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	28504	30096	GCA_001053575_1_7_39	GCA_001053575_1_7_39	+	45904	.	COG3593	Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains [Replication, recombination and repair]. 	MIKEITFKHYRKLQNFTLNFSKKINVISGENGTCKSSILHIVSNSFQKVDSNHPFIKDDLLNAINQLNHKVNPKVYSLTKGDKKENSPVPPGFTGGLLTVKYFDEDQTLEFRKHKYPPPRYSLKPYYPEGGGESLPELMIIYLGLSRLVPVGEISDTEELSNTVIISEEYEQDIINKYYELTGILIKSITSNEIKNLKSRYSFETNREGIDSNTVSAGEDNLLILLTAIYSLKHYYKTTEGMHSILLIDELDATLHPSLQYEIFYLLKEISQEYDVQVFFTTHSLSLLELAIKNNSNITYLIDEIDSVYPMEKPDIRKIKLFLEKKTQASLYENNKIPLMTEDKEAREFLRLIFDFYSTRDNFSEIISIFDLIDINLGKNNLKDIFTNESLSRTLQAICILDGDDSHNYKKNILTLPGKDNPEIIAFTHFKKLLDNKTFWRQSILISNGYNISLARKELLPEIDKLLNKRDREKAKNLFNKHRFLFRIILKDWLNQKENLTMLHGFYHALYGAFKNVALAHKIDPNCWFK*	mmseqs_cdd	nonviral_gene	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0039	cloud	direct	high	1592	0.999	GCA_001053575.1_00284
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	30158	30976	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	30159	30977	GCA_001053575_1_7_40	GCA_001053575_1_7_40	+	45904	.	PDB:2G1P_B	Adenine-specific-DNA-methyltransferase	MKNTPLRYPGGKAKFAPVIKQIIEKNNLHGHYIEPYAGGAGVALDLLFSGYCSDIHINDLDLAIYHFWKSITEQTEDFIRLTNDTKVTIEEWHKQKNILKEKENISPLEYGFAAFFLNRTNRSGILKAGVIGGLNQTGNYKLDCRFNKADLIQRIERIGSVAKHIHVTNFDTEEWLSTLDDNIPANSLIYLDPPYYEKGQGLYRNYYQHKNHVAIQEKLAKVKMHWVVSYDNHPNIREIYHQYRQSEYSLNYSANKKMKATEIVIYSDNLIL*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0040	cloud	direct	high	818	0.999	GCA_001053575.1_00285
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	31298	31531	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	31299	31532	GCA_001053575_1_7_41	GCA_001053575_1_7_41	+	45904	.	.	hypothetical protein	MIITLQDLKKQINSTSPIECDLKVGDRVIYKNDFGIKFGPFEIIGFEKKEDISGGRFVYLNKDCYWFPVKAEQLTKQ*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0041	cloud	direct	high	233	0.996	GCA_001053575.1_00286
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	32193	32378	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	32194	32379	GCA_001053575_1_7_42	GCA_001053575_1_7_42	+	45904	.	.	hypothetical protein	MLINKRGSNMEEKQEKSLSDKDKRLIKQAVLESAAKNTNLPPDNIAKALCRAFTFIDLYGQ*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0042	cloud	direct	moderate	158	0.849	GCA_001053575.1_00288
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	32356	32649	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	32357	32650	GCA_001053575_1_7_43	GCA_001053575_1_7_43	-	45904	.	.	hypothetical protein	MLVRLKPLLSPQHIRNIIFTTTTQNKEKIVKKIEADAVAIAIARDILRTNSSQYLRDINEYTAEDIAKFISRLSTELQTSMDGNLTSDDVFIAHKGQ*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0043	cloud	direct	moderate	207	0.704	GCA_001053575.1_00289
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	32871	33116	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	32872	33117	GCA_001053575_1_7_44	GCA_001053575_1_7_44	+	45904	.	.	hypothetical protein	MKRNRLFVCFNSFDLLTDFIEISEDVIFKDEEALKRYIEKRTINRYVILSENDVAHEIYVNKGNVHTKLGTNYIVYPVYIS*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0044	cloud	direct	high	245	0.996	GCA_001053575.1_00290
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	33215	33712	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	33216	33713	GCA_001053575_1_7_45	GCA_001053575_1_7_45	+	45904	.	.	hypothetical protein	MITYQQLCDQQQKYNDELNKRRNNLRQLISEFCQAISQNLGLSDKYYNATINEVSTTVPYVKLLELDSDEHQHIHVMELPITFDEQGYPIAEAGISLTLERSPNTYPKQSVFIRIEFTLKQNILILRFIDFDDGLFKVTVNLDDNDRFAYAVEGYKQAIMKTFTI*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0045	cloud	direct	high	497	0.998	GCA_001053575.1_00291
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	33863	34624	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	33864	34625	GCA_001053575_1_7_46	GCA_001053575_1_7_46	+	45904	.	PFAM:PF04383.12	KilA-protein	MIGSREPNTIPKGNKFRRLEAVVEARSPYKSDRMTNKTSRGIKMSNLQILTQSIRTFENLYALNDLHIASGGKDKHRPNQFIRLDTTKALIAEIEKDNQHALKIIRGTNGGTYACEELVIAYAMWISPQFHLVVLRAFLAMHRNQPQQLALPEPEKKFTFEFTEYELQELAWLWFAFKRGVGTFQHIERAFNVLGSNMSGQIYGQAYEYLSVLRSTNQILNRITSDFNIDPMTNWRVLKHLRDFNPKAVKIDF*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0046	cloud	direct	moderate	632	0.829	GCA_001053575.1_00293
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	34720	34974	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	34721	34975	GCA_001053575_1_7_47	GCA_001053575_1_7_47	+	45904	.	.	hypothetical protein	MEKFTDVFAEITRPLTKIACAMFVAFLVGGISYCFASKPTALEREQARVQWIAEHGEYQKNLTEEGEKQARAYVSIKQAEINKE*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0047	shell	direct	high	254	0.996	GCA_001053575.1_00294
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	34977	35189	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	34978	35190	GCA_001053575_1_7_48	GCA_001053575_1_7_48	+	45904	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MKLPFKTNSELAAKEERKKNYQSAYVLWKKASKLTGKEINKHWCISRAEWCQKMHQEEVKLKTRKIYVPH*	mmseqs_cdd	nonviral_gene	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0048	shell	direct	high	212	0.995	GCA_001053575.1_00295
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	35176	35730	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	35177	35731	GCA_001053575_1_7_49	GCA_001053575_1_7_49	+	45904	.	PFAM:PF12917.6	deoxyribonucleoside-5'-monophosphate-phosphatase	MYRINTYYGHTIDYIKPDPNEIDIRDIAHNLSFENRFIGQTAEPYSVAQHCVLGSYIFEEMGLPELAFLFLLHDAAEAYLKDIPTPLKHLLSEPYRNIEDRFNLAIHQRFNVEYKKLPAIKSMDLSMLATEKEQLLPPASVEWPQLEGVYPANIAIVFWQPHEAESAYLAQFKHLTEILNYGDK*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0049	shell	direct	high	554	0.998	GCA_001053575.1_00296
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	35717	36520	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	35718	36521	GCA_001053575_1_7_50	GCA_001053575_1_7_50	+	45904	.	.	hypothetical protein	MATSKKPRKKHDKNANIKRQSDRICRNSLVLSVIGLGNDGTEWIKNNIPQDRTTATEQDFELMYNKSRPWSFVFGVICRDQLGRGYIKFEYQSLANQFAFTAPEMTDYVNDNINAILNDVNEEHVLSPFLIASPEKKEFTDDYIKKLLTWKKVETTLKTPFEIKALREEGMAALREIDPTAYTDKATWTILRKNGCNDFADMRLVGLEKYQHCKGIGKKRIQSLIDGYHALINDEKLIPKLTALREFETQIYIHQQTMARLNRVAQM*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0050	shell	direct	high	803	0.999	GCA_001053575.1_00297
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	36530	36748	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	36531	36749	GCA_001053575_1_7_51	GCA_001053575_1_7_51	+	45904	.	PFAM:PF06289.10	flagellar-protein	MAKFIKLTNTDESDIFINVEQIQTITKDENDTAIQFEDGTIFVKETPERIIHSIQSGGAVNVLPVVDVMTAK*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0051	shell	direct	high	218	0.995	GCA_001053575.1_00298
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	36937	37149	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	36938	37150	GCA_001053575_1_7_52	GCA_001053575_1_7_52	+	45904	.	.	hypothetical protein	MFRQDVQVSNGKRYVVIECQFGHEWGMVRETRETVSEGEALEIVKYWIKYKRIKPEQIMVIEVPDICKPW*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0052	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	37295	37576	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	37296	37577	GCA_001053575_1_7_53	GCA_001053575_1_7_53	+	45904	.	.	hypothetical protein	MTELTKNDLRVGHVYSAKSPKEHGFPPLLGDRQILWMGLIYDNKEGFVDGLQYDSPSVRNGRNYPKISITKFLKWAKADITDTMPKDKWRYAR*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0053	cloud	direct	high	281	0.996	GCA_001053575.1_00299
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	37596	37733	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	37597	37734	GCA_001053575_1_7_54	GCA_001053575_1_7_54	+	45904	.	.	hypothetical protein	MAGNALCLILWGSIQKKSDRTFYVRFLLESIWEENFLMNTAVQNY*	.	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0054	shell	ambiguous	low	45	0.326	GCA_001053575.1_00300
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	37688	37930	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	37689	37931	GCA_001053575_1_7_55	GCA_001053575_1_7_55	+	45904	.	PFAM:PF13986.5	excisionase	MGREFFDEYCSPELLALITGYVCPKYQMKSLNEFGIPFLHPKGNRKFPLVLRSDGDKVLKGEKVQQITQTKERRRSAVLS*	phrogs_hmm	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0055	shell	direct	high	242	0.996	GCA_001053575.1_00300
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	37944	38975	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	37945	38976	GCA_001053575_1_7_56	GCA_001053575_1_7_56	+	45904	.	PDB:1Z19_B	Integrase	MARPRKRINQGLPQGLVCRNRKRADGSIVVYYYYTMAYKKEVALGKDKHIAILEAAKLNMQYLTKKDNILFIEVLERYEKEVVPLKKAKNTRNSNIQAIKKLRQYFQDPPFTLDEIEPIHIREYLDWRKDVKPTANIEVGLFGHIWSMAREWGYTEKVSPSTGVKKFKVNYRDVYIEDYILDKIYDCATGDMKDIMDVMYLTGQRPIDVVKIHSSHIYNDLLHITQQKTGKRVAIKVIGKLKEIIEKRITDENQFLFTNKWGRKLERRSLTDYFKDTRNAASRKYKELAEEINQVQLRDLRAKAATDLSLMIDDERARKQLGHTSARTTQHYIRKEKPLNPTK*	common_virus_hmm	common_virus	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0056	shell	direct	high	1031	0.999	GCA_001053575.1_00301
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	39124	39411	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	39125	39412	GCA_001053575_1_7_57	GCA_001053575_1_7_57	-	45904	.	PRK05943	50S ribosomal protein L25; Reviewed	MAFKFNAEVRQAQGKGASRRLRHNGQIPAIIYGGSEAPVSIILNHDELNNAQAHDSFYSDVITLVVEGKEVAVKVQAMQRHPFKPKLVHIDFKRA*	mmseqs_cdd	nonviral_gene	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0057	persistent	direct	high	287	0.997	GCA_001053575.1_00302
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	CDS	39638	40243	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	39639	40244	GCA_001053575_1_7_58	GCA_001053575_1_7_58	+	45904	.	PF09335.11	SNARE associated Golgi protein	MEFLISFFTDYGYWAVLFVLIICGFGVPIPEDITLVSGGVIAGLYPESVNSHLMLVVSMIGVLAGDSTMYWLGRIYGTRILRFRPMRKIVTLERLKMVREKFAQYGNRVLFVARFLPGLRAPIYMVSGITRRVSYTRFVLIDFCAAIISVPIWVYLGEFGAKNLDWLHEQIKKGQLVIYILIGILVLFLFWKWKKAKKQAK*	hhsuite_tools	hypothetical_protein	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_CDS_0058	persistent	direct	high	605	0.998	GCA_001053575.1_00303
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	39540	40607	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	1	1068	GCA_001053575_1_8_38	GCA_001053575_1_8_38	-	56103	.	PRK02406	DNA polymerase IV; Validated	MNSTRKIIHIDMDCFYASVEIRENPTLQGKPVAVGGSSRQRGVLTTCNYEARKFGLHSAMPTAQAIKKCPNLILVPVNMPLYKQVSAQIHQIFQRYTSIIEPLSLDEAYLDVTDCTQCSGSATWIAQEIRQAIFDELKLTASAGVAPLKFLAKIASDMNKPNGQFVIQPHEVEQFVKTLPLKKIPGVGKVTSERLLKMGLETCEDVQKLDQSILLNIFGKMGKRIWDFSHGIDDREIQAHRERKSIGVERTLSENIRHLEQGIALLDNLYAELIRRIERSAPNIPLTAFRKIGVKLKFEDFQVTTLEKTGLTLSLKSFQQLLEQIWQRSHGKSIRLVGLHVNLPEESHLEQMSLW*	mmseqs_cdd	nonviral_gene	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0001	persistent	direct	high	1067	0.999	GCA_001053575.1_00359
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	40717	41214	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	1178	1675	GCA_001053575_1_8_39	GCA_001053575_1_8_39	-	56103	.	.	hypothetical protein	MKTLKSLTALSLGALCLAFNTQVIAKEATPAKTTQATQQVTKASDNIDKYLAINIGNREMVVDENGQALSAFKHEITNIGQKPIKNIQWVGVYVNNRKVIYSQDMQINLETPLQPGKSININLQIPFVQLAEDARKVFMNQQEKIDVYPIERVILFGDKTVLSDR*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0002	shell	direct	high	497	0.998	GCA_001053575.1_00360
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	41883	43175	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	2344	3636	GCA_001053575_1_8_40	GCA_001053575_1_8_40	+	56103	.	PDB:1Z19_B	Integrase	MAKIVKQLTIAQVNNAKAAEKIYYLFDGEGLKLVVKPNGVKTWVFNYKRPYTLKRTEKTIGTYPTVSLKDARQKAQEFRQLLANKIDPHEFEQKQAIEALKEQCSTFAYVANEWLLYRAKIGKEQGNYTERTKIDTERRVNAAIDLIGDVPFKELTLKHGLSVLEPHRQSGATAELKKRYLVLKSIAEYAERFEYWENNKWKYLGDDLPAVNKNKHHPSIHYKALPEFMISLARANISQTVRLAILWGLLNATRASETVSAKYSDIIEHENLPNGKVWQVVISKGGKGERLHLVPLSKQAETLLSYIKQHTNKEYLFPSTLSKARNEKHINSQTPNEVIKTMDGGKYKGTMTNHGIRSIFSSYCNDNRLELGLDKEVIEICLSHLNSDEIRNAYNRAEYLPYRLKTFQEWANYVEKCANGLFKEIIADKS*	common_virus_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0003	shell	direct	high	1292	0.999	GCA_001053575.1_00362
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	43156	43323	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	3617	3784	GCA_001053575_1_8_41	GCA_001053575_1_8_41	-	56103	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MERYFSIKEIVQTGICSEATVKRWISSGKLKSYKFGRSRKIAESDLNEYIKTCRQ*	phrogs_hmm	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0004	shell	direct	high	167	0.994	GCA_001053575.1_00363
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	43323	43835	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	3784	4296	GCA_001053575_1_8_42	GCA_001053575_1_8_42	-	56103	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MTTLTQLIKNIENWAEARNLIEGSTPKKQFIKLMEEFGELCSGVSKNKIDVVKDSIGDCFVVMVILAAQRKKDEMLSAGAVAEFVEPYGNNKVDIEDHLINSLYALHLLRHELSSHANISVFFMTCFVQLLEVTDHFDLNIHDCVQAAWDEIKDRKGRMIDGVFVKEGDL*	phrogs_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0005	cloud	direct	high	512	0.998	GCA_001053575.1_00364
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	43810	44004	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	4271	4465	GCA_001053575_1_8_43	GCA_001053575_1_8_43	-	56103	.	.	hypothetical protein	MIVIKELIQVIYFNENDPQAGGLALYNDGTVHELDSFNRQSKKQLSIDKINTNEALNDNINTTY*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0006	cloud	direct	high	194	0.995	GCA_001053575.1_00365
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	44016	44261	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	4477	4722	GCA_001053575_1_8_44	GCA_001053575_1_8_44	-	56103	.	.	hypothetical protein	MEKVKKTIKVKPSVERISSGVNSPVRKIVQIAMSNNLSNHGYMGEIIALCDDGTLWQRGIQITDEKFEGGEWFRLNDIPQD*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0007	cloud	direct	high	245	0.996	GCA_001053575.1_00366
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	44269	46467	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	4730	6928	GCA_001053575_1_8_45	GCA_001053575_1_8_45	-	56103	.	PFAM:PF05840.12	Rep-protein	MMNWEQQRDNNIAKRDSAMEEARLARMESAAKTHRTLDLPQATAAQIELFAVAPNHFDYVEKLLSDLPRKRQREHFRNVWLRAYRSVKDDGSISFSLGNKQARIANTTLRDVLTNRLEAVFEQYRISVSWLLERKHYSANLAMQKPVDSKGLHFYLLGERQLKEIAYKLALHFNGLQSDFVEDCANQKAVGLLSAVDFSRLSSELHRLCADVCKNIGFPLKSQHRLEEGKRLSVQQQEGELLRVVCEKYWFRTLRSTQKRLVEHLAIGCGEVSAKVSPYISTGALSDYRNQQKANLEYLKQMIIENIDDPSEQVELMAMWQKSSGNPAIRFNEMMNRLRGVDEWATEKGYVSLFLTMTAPSSFHATHNNGTNNKKWKGADPRTTHAYLSKNWAQLRALFAKRGIGFFGMRGVEPHHDATPHWHLLVYVKAEDKEEVIRLFKSKALELDGDEFGAKKHRCRVDEIDPAKGSAVSYIAKYIAKNIYAGNQKDETSDEVEGLKLDENVQRVRAWANLWGIRQFQFYGNPPISVWRELRKLEKWQLDDVDDKTIADAQAVCDVSCFASYLELQGGAMAKREDQPLCVEYEESEPNQYGETRKKIVGVKNRFSLASVRTKLKNWVIKKGTVADVATDANAETTETNKERSDAWTCVSNCNRSEIEQKVKNALLPIGFMINRSQIDLLIKHKRLRINDFQWICYENDNVFIKEEKIPLFSVKKFSQKVTGFWERLGKM*	rep_hall_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0008	shell	direct	high	2198	1.0	GCA_001053575.1_00367
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	46475	46783	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	6936	7244	GCA_001053575_1_8_46	GCA_001053575_1_8_46	-	56103	.	.	hypothetical protein	MSTDIYINLDCGAELQITKIGDRFQVLEIVADSDGWRKQKARVIGRLHNTIIGAVNEVRNFALAQYEVLSLTEMESAINSTNQAIKDYFDQHNEYLANLQRA*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0009	shell	direct	high	308	0.997	GCA_001053575.1_00368
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	46796	46909	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	7257	7370	GCA_001053575_1_8_47	GCA_001053575_1_8_47	-	56103	.	.	hypothetical protein	MSDFFIGLAVVMLGCFMAAALLDAALCWLASWISKHF*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	47150	47404	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	7611	7865	GCA_001053575_1_8_48	GCA_001053575_1_8_48	-	56103	.	.	hypothetical protein	MATVILSRGALSIVAKEYYQKLDKAQEKLFAYIYHLDKGDEEQARQAFNEFIENGDLATKARQIFLQKYRDWEQWQANPRRKTA*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0011	shell	direct	high	254	0.996	GCA_001053575.1_00370
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	47413	47772	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	7874	8233	GCA_001053575_1_8_49	GCA_001053575_1_8_49	-	56103	.	.	hypothetical protein	MYVSGKESAAAKFCKENQIAVEPVQSWGDCRHVIGKSRYRVEYAFSNLSQGEREILLAMAELDINDLVSTTFSGEKLHHYTENGQRKIAKAFRKVRLISGMFPKGITEREFTLIDKALN*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0012	shell	direct	high	359	0.997	GCA_001053575.1_00371
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	47788	48048	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	8249	8509	GCA_001053575_1_8_50	GCA_001053575_1_8_50	-	56103	.	.	hypothetical protein	MSRKNYVYDNGKTHKERVNVYQLEKRVKALEVQNQAIKRHLQHQINLNQQQVLLNETLSDRVALLEKASWSKQGMFGRWLSWVQGK*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0013	shell	direct	high	260	0.996	GCA_001053575.1_00372
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	48141	48383	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	8602	8844	GCA_001053575_1_8_51	GCA_001053575_1_8_51	-	56103	.	3GA8_A	HTH-type transcriptional regulator MqsA (YgiT/B3021)	MNVDHKCANCGSNNIRVRTSEKIGLLSIDVLAYCNNCGTELRVQSQITRVRTPIYNDRPEALSANKPLNQIDERQQEIDI*	hhsuite_tools	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0014	.	unmatched_CDS	none	0	0	.
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	48465	48788	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	8926	9249	GCA_001053575_1_8_52	GCA_001053575_1_8_52	-	56103	.	.	hypothetical protein	MCETAIQAGGKFLLRKTKDGKYRLSFTLFYDDSTSVEHLQARQILLQSFLLDLHQEKNCLDAGRVCIRNIDGVLDAAGQFYDAKAEQEFAQARECVGDFVNFLRSIR*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0015	cloud	direct	high	323	0.997	GCA_001053575.1_00373
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	48808	49020	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	9269	9481	GCA_001053575_1_8_53	GCA_001053575_1_8_53	-	56103	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MKGIKQAVALCNGQSSLARACGVSQTAVLKWLCGGKMDVKYIPAIIKATEGKVRAEDLRPDVDWAVIRNS*	mmseqs_cdd	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0016	cloud	direct	high	212	0.995	GCA_001053575.1_00374
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	49139	49813	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	9600	10274	GCA_001053575_1_8_54	GCA_001053575_1_8_54	+	56103	.	PDB:2FJR_A	Repressor-protein-CI	MSDLATRLQDLLHENRLSVNAFSKQVGVSQQAISKIVRGETLNPKNILEIATALNVDPHWLKTGEGDPDPSYRIVEVSEPQNPNTVRIDILDVEASAGNGAYLSPTEQGLLSQEFDLTFFRQQFGRADAKHLKLITVKGDSMAPTLESGDLLYVDISENYFAADGLYVFTFDGQTFIKRLQKVGKEMLVISDNPTYKEWTFTQDDDVFIHGRVVFSMPMKWRKW*	common_virus_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0017	shell	direct	high	674	0.999	GCA_001053575.1_00375
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	49822	50337	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	10283	10798	GCA_001053575_1_8_55	GCA_001053575_1_8_55	+	56103	.	cd17752	BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins. RFC1, also termed activator 1 140 kDa subunit, or A1 140 kDa subunit, or activator 1 large subunit, or activator 1 subunit 1, or replication factor C 140 kDa subunit, or RF-C 140 kDa subunit, or RFC140, is the large subunit of replication factor C (RFC), which is a heteropentameric protein essential for DNA replication and repair. RFC1 can bind single- or double-stranded DNA. It could play a role in DNA transcription regulation as well as DNA replication and/or repair. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this family.	MAMEKFVVYMNAHKEVNAYHITNIAENDVYLIGYCHAYGRVLTLRHDRIIQEFDNIEDAKQYALNVPDDKFHLYDSLINSQKRELKKNPPCLSVTFCFSGFKAAAKEEMIQLAIDHNLRVVSDVSSKTDFLVICEKSKTVGPSKLAKAEKHGVKVIYEDAFFYMLETGEIK*	mmseqs_cdd	nonviral_gene	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0018	cloud	direct	high	515	0.998	GCA_001053575.1_00376
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	50334	51071	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	10795	11532	GCA_001053575_1_8_56	GCA_001053575_1_8_56	+	56103	.	.	hypothetical protein	MNDFDKEKLWAELVTINNNNKLDLPIRLYNLIYNSESFTETLHASANNILKNINLRDIQDLLKPSHSELLKNSLMEIELNKMFNSDSIYSALKIANKVAIISKSALENEITDDEFDSSIQDLPSVSSEDVDAFENEEDLALQEVACSIWVLILQAFQQNKPKIIPVLFHILFFILQYSGEKGLDYIFDDHQQEHVMAMIEQDQKELKELKEQNKVILDEIKSLKSQASEEQDNKQTPEDGPFDII*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0019	cloud	direct	high	737	0.999	GCA_001053575.1_00377
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	51105	51377	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	11566	11838	GCA_001053575_1_8_57	GCA_001053575_1_8_57	+	56103	.	.	hypothetical protein	MTNNDLLNLYNLEKSSYDSYGTWRTSLLLGWVFNLIINISSNFYDSKHGMVIFVISNFVLFVAFVILTVQREQANKRVSQIMKMLLNKNP*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0020	shell	direct	high	272	0.996	GCA_001053575.1_00378
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	51400	52593	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	11861	13054	GCA_001053575_1_8_58	GCA_001053575_1_8_58	-	56103	.	PDB:3D37_A	Tail-protein	MLGLDFNDNHRTPAFKVVITTKDNKQQDITQVVSSRLINLSLTDNRGLEADTLDLELSDHDGKLALPPRNATISLALGWKGAPLIDKGKYSVDEVQFSGGASSADKLTIRARAADLKGTFTEQKERSFHQKKLGEIVNEIAQGNKLKSQVAKELANRLIDHIDQTNESDINLLTRLAEEHGAMCTVKNGTLLFMPLGKGKTATGKDIPLRKITRKNGDNYNFSIAESENYKAVRAYWHDTDSGKRGEITVDENTKIVKKQRMTKGRTLKNGTVKGRRLSKRKYNEIEQQEPITSDSSQIKSLRHTYASEKTAITAAKSAFDKLKRGVATFSLGLAFGEPDLMPETPIELSGFKAEIDATNWLITRVTHNLSDSGFTSQIECELKVEDEEVDVKKVKK*	common_virus_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0021	shell	direct	high	1193	0.999	GCA_001053575.1_00379
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	52593	53030	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	13054	13491	GCA_001053575_1_8_59	GCA_001053575_1_8_59	-	56103	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MFQNFALAALGMFVFTRQTVPFQSLDRTSTWRHPTNAIVGAMPKSQFTGKESETVTIGGRLIPEITGGRFSIKALELMADSGGAFPLIDGATFEIIGFFVIENIQETRTEFFGDGAPRAIDFTMNLKRTDDPMLIAIADSLMSNL*	mmseqs_cdd	nonviral_gene	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0022	shell	direct	high	437	0.998	GCA_001053575.1_00380
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	53030	53191	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	13491	13652	GCA_001053575_1_8_60	GCA_001053575_1_8_60	-	56103	.	.	hypothetical protein	MKSILIFFFYFLSIIAVTGYATFLMYHNIDGWGWVIFIDVLLMLMTVKVEDDK*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0023	cloud	direct	high	161	0.994	GCA_001053575.1_00381
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	53359	53505	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	13820	13966	GCA_001053575_1_8_61	GCA_001053575_1_8_61	-	56103	.	pfam06528	Phage P2 GpE. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.	MIAATVEDAMADIALIFHWQPQAFEQMTFAELMTWREKARERNETEND*	mmseqs_cdd	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0024	shell	direct	high	146	0.993	GCA_001053575.1_00382
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	53505	53798	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	13966	14259	GCA_001053575_1_8_62	GCA_001053575_1_8_62	-	56103	.	PFAM:PF10109.8	tail-assembly-chaperone-protein	MKNENSKVITLTNPLVRGETKITEITVNKPTVPALKGLKMFDVLQMDVDALQVLLTRVTNPVLHKSDFSTMEVADFTELAAVAVGFLGKNSEAEATE*	hallmark_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0025	shell	direct	high	293	0.997	GCA_001053575.1_00383
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	53877	54383	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	14338	14844	GCA_001053575_1_8_63	GCA_001053575_1_8_63	-	56103	.	PFAM:PF04985.13	tail-tube-protein	MALPRKLKLMNFLADGNSYRGQVTEITQPKLAMKLEEYRAGGMIGPVKVNLGVEGLEAQFKMGGYMTELIKEFGGKIDGSALRFAGAYQQDDTEEVTAIELIMRGRFSEIDNGTSKSGDDTEQSYTVPLTYYKIIENGKDLVEIDLLNSIFIVGGTDRLAEHRSAIGI*	hallmark_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0026	shell	direct	high	506	0.998	GCA_001053575.1_00384
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	54387	55571	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	14848	16032	GCA_001053575_1_8_64	GCA_001053575_1_8_64	-	56103	.	PDB:3J9Q_C	sheath-tube	MSDEYLHGVKVTEIAEALRTLTTSSTAVIGLVATAADADATVFPLNKPTLLTGITAEVQAKAGKQGTLSRALDGIADIVNCKVVVIRVEENDDESTMKANVIGTVDSDGNYTGLKAFLVSAAVCGVKPRIFCVPKYDSQDVTTELLSVAKKLNGFVYASCGSAKTKEEAVTYRRNFSQRELMLIFGDFLSFNPNTKATEVDYAVVRAAAMRAYQDKEYGWHTCISNKGLTGVTGVTKPLSFDINDSATDVNYLNEQGITCCVNHNGFKLWGLRTCSADKLFIYENYTRTAQVLKDTIAQSFDWAVDKNISVMLVKEIVEAINAKWREYVAKGYLVGGKAFINSSLNTAATLKDAKLLVSYDYCPVPPLEQLGFNQYISDEYLVEFAAEIAKVGA*	hallmark_hmm	common_virus	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0027	shell	direct	high	1184	0.999	GCA_001053575.1_00385
GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote	cenote	CDS	55705	56100	GCA_001053575.1	JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575.1_JVSL01000013.1	GCA_001053575.1|JVSL01000013.1	GCA_001053575_1_8	GCA_001053575_1_8@C3	16166	16561	GCA_001053575_1_8_65	GCA_001053575_1_8_65	-	56103	.	.	hypothetical protein	LSNISVNIKEGAIHLRRVNNRVECSFYAGRWDTISFYGSSNPKFTRKNHAKRMDILPPPRIPAGFRTRTPIMLPFYSDDGDEVAVVYVASLSDRAYIELRFRDKVPTTDLDYMRLPVVSWITDDPFPEVLP*	.	hypothetical_protein	C3	16564.0	39540	56104	GCA_001053575.1|JVSL01000013.1@region_39541_56104@tool_cenote_CDS_0028	shell	direct	moderate	240	0.606	GCA_001053575.1_00386
GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote	cenote	tRNA	32014	32091	GCA_001053575.1	JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575.1_JVSL01000012.1	GCA_001053575.1|JVSL01000012.1	GCA_001053575_1_7	GCA_001053575_1_7@C0	32015	32092	tRNA-Met	tRNA-Met	+	45904	.	tRNAscan-SE score: 48.8	Met	NA	tRNAscan-SE	.	C0	40244.0	0	40244	GCA_001053575.1|JVSL01000012.1@region_1_40244@tool_cenote_tRNA_0001	.	.	.	.	.	.