core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	53812	54312	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	1	501	GCA_001054455_1_17_54	GCA_001054455_1_17_54	-	62518	.	PRK10304	non-heme ferritin. 	MLSANVIKLLNDQMNLEFYSSNLYLQMSAWCEQNGFEGAAKFLSEHAAEEMQHMRKLFTYLNETGALAVITAIEAPAHEYKSLKEIIELTYEHEKLITSKINELVGKTFEEKDYSAFNFLQWYVAEQHEEEKLFSGILDKLNLLGEDGKGLFLIDKDLANLAGQTA*	mmseqs_cdd	nonviral_gene	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0001	persistent	direct	high	500	0.998	GCA_001054455.1_01036
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	54333	54818	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	522	1007	GCA_001054455_1_17_55	GCA_001054455_1_17_55	-	62518	.	PRK10304	non-heme ferritin. 	MLNKAIADKLNEQINLEFYSSNVYLQMSSWCSKHGYEGAAAFLLRHADEELEHMQKLFKYVSETSGMPLLGKIDAPKNDYKSLKEVFETTLEHEKLVTSKINELVEVTFANKDYSTFNFLQWYVAEQHEEEKLFNSIIDKFNLLGEDGRSLYFIDRDLATL*	mmseqs_cdd	nonviral_gene	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0002	persistent	direct	high	485	0.998	GCA_001054455.1_01037
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	55741	56877	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	1930	3066	GCA_001054455_1_17_56	GCA_001054455_1_17_56	-	62518	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKLQRNILCFFSCFLFGVAQAKNVDFKLEAVPLPKAVGMIYDEVLEKPYMLDPKLAADTRLISFHTKEDQDFNQFITRYFENMNIKTYEKNGVVYLAHIEPKPPKIIKHSFVYNPVHRDTEYLAQFLQGEGQVSASGDKLVYYGTAEDIARIKSVLKSVDTPSREVVVTGYVFEVQDIAKEGSGINLLAKLLSGKLGINIGYKQNYENFITVNAGNLDAMIELFRTDERFQVVSSPTLRVKSGSKGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSSGVIFDIQPTIKSNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKLTEGETGFSFLPKGFLTGKSKSNTKTDIVILLQVKMI*	common_virus_hmm	common_virus	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0003	shell	direct	high	1136	0.999	GCA_001054455.1_01039
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	56874	57917	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	3063	4106	GCA_001054455_1_17_57	GCA_001054455_1_17_57	-	62518	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAISAYVGLPGHGKSYEVVKSVIIPAIASGRRVVSNIYGLNKQLIEEYCLSKDKKLSPDNLGELVIVDNDLCLGVDFYPYKNAIDNNIETFCKAGDLIIIDEAWRFFPKKEKINDNHFSFLSEHRHFTDSNGISCDFVILNQDLTNLQRELVERIETTFKMTKLVAAGLKSRYRVDVFSGNKCWKTAKTASYQEKYDKAIFPLYKSYETDNGRELVTDKRQNALNKSSIKYFAVFAVLIVGFSLYKLISFFTPPEQDTPKVEQTLSENKEIEAITLNNQPQLQVTLPLSTQWRITGELQKSGKAFVILADNQGNLRLEPRSNFNFTGRMLEGIIDNQRVNYYSGVKQ*	hallmark_hmm	common_virus	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0004	shell	direct	high	1043	0.999	GCA_001054455.1_01040
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	57926	58219	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	4115	4408	GCA_001054455_1_17_58	GCA_001054455_1_17_58	-	62518	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MGSLILRLFSGFLGFAFKGIVAKFFVFFALFFITTEFIPVVIELFLPKEIPNLNALFSGLPDSIWYFLSILQIPTGITLVISAMLARFIIRRLPIIG*	hallmark_hmm	common_virus	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_001054455.1_01041
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	58229	59887	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	4418	6076	GCA_001054455_1_17_59	GCA_001054455_1_17_59	-	62518	.	.	hypothetical protein	MGFCLFSFGYGMRFSRGAWLKWIVIFSFIFNVVLSYKANANPLLARVVLAEVFEGIVARRAAVSVVGRAAANDAAYLAANEAAIGLRAAQTYRALGTVAANDATFAVGATSTLRNAKDISWVALALTSGAITLKDLNVESNSKIGVAFEPTAVPLADGRYAINVNGETKVVNAMPSPKDPIIYQYSKEKKQISENSQDIYKSDVLDKHYKYFNTLRTGEYAQSNSIEKLAEYIAQEEWGGKGEENYSEVDIEGKKYRYLRSQTTVENRYLRHQKIGNMIYPEVRQIFTEKQLNYDFEPILEGNTGSQIVYSFNPPKPSDYEVSTRVNNLTYIRFEENQHWVGDFPTTSSDKQLNSVADLDLNLYTKPLTATQLALLYNALLMSAASQPGYIGVPFSASDPITSAEVQAQLNKLGKTATFADLFAKAGVGNQLSIGTSNQPQPIPQPTPNPGTRPGEEKDDKDIDDEPKYPELESPTARQILEPFNQFFPQLKNFHLADRAVQCPTWEGHIDYLNIDVRLDKHCQYVEQNKAVITSLMLLIWGIVALRILLSA*	.	hypothetical_protein	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0006	shell	direct	high	1658	0.999	GCA_001054455.1_01042
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	59939	60169	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	6128	6358	GCA_001054455_1_17_60	GCA_001054455_1_17_60	-	62518	.	PFAM:PF10389.8	virion-structural-protein	MSNLKKYLIAAVVLGSSVGAFAGSESAQKVQIDVSGMLNQVDFSTVIAGIIAAGGVLIGPRIAKMGIRFILGLFGK*	phrogs_hmm	hypothetical_protein	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0007	shell	direct	high	230	0.996	GCA_001054455.1_01043
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	60204	60470	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	6393	6659	GCA_001054455_1_17_61	GCA_001054455_1_17_61	-	62518	.	.	hypothetical protein	MNEEIEITTKFCHPYMSFGGDGCSDVVLKVPRTEAVKLQSVAHSGNENQGFSVGDFFHHTDSFGFSFGLVLIFYLIAKSVGTFLALFK*	.	hypothetical_protein	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0008	shell	direct	high	266	0.996	GCA_001054455.1_01044
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	60470	60766	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	6659	6955	GCA_001054455_1_17_62	GCA_001054455_1_17_62	-	62518	.	PDB:1GVP_A	Rep-protein	MSNQNIEQYLLKVQIFSTSRIDERSGVSEKTGKDWFIRTQEAYIELGGQFPVQIKVPLKKDQVPYSPGNYYVHPTSFKVSGYFDLKVSDIVLVPAIDK*	rep_hall_hmm	common_virus	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0009	shell	direct	high	296	0.997	GCA_001054455.1_01045
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	60791	62059	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	6980	8248	GCA_001054455_1_17_63	GCA_001054455_1_17_63	-	62518	.	PFAM:PF05144.13	Phage-replication-protein	MIDFLKLSIPFKTEHILVCKDGETSFLKETLIEIAKRTGLKLRAGNVTFEIDGDLDVAELSHPYEAIPSHFGSLAMKVFNGSDRMKTPPYIELKASPAKLLQGHNVFGSTNLDVCCFVMLKTFCEALPELYEMTDTENTMIDWIDVTYSAHIPSEMMQKQVISFLQNVRAGQTKKTRYNREYETTAEWNSGSEHRVLKVYLKGAELQKRLSEIQSELKRTPNKQNLLNVLNVLSNPNLIEFSKQCVRFEARLKQRYLDKYRIPRKLCDLIQYQRQYEKQGKSLIKDLWQDAFNDIIQAVGESKMNVYNRDNIQKLLKKQYYTVTPKGNISYAKADRLFGFYKNLLTYGYLETQSEMDRKTFWRHEKDLLAVGLTKAQLQNLKAHERHNIIPLMKLVEIDFSCQRPDWYVEPTLDFVQMQLAA*	rep_hall_hmm	common_virus	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0010	shell	direct	high	1268	0.999	GCA_001054455.1_01046
GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote	cenote	CDS	62201	62407	GCA_001054455.1	JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455.1_JVSA01000021.1	GCA_001054455.1|JVSA01000021.1	GCA_001054455_1_17	GCA_001054455_1_17@C5	8390	8596	GCA_001054455_1_17_64	GCA_001054455_1_17_64	+	62518	.	.	hypothetical protein	MRKDTSVRVNEMRRNKLEMLAIEISHKSGKLTKMSDIVNHLLDNYLQEAKQDLLHNAENSGKDKTKST*	.	hypothetical_protein	C5	8707	53812	62519	GCA_001054455.1|JVSA01000021.1@region_53813_62519@tool_cenote_CDS_0011	shell	direct	high	206	0.995	GCA_001054455.1_01047
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	2	193	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	3	194	GCA_001054455_1_32_1	GCA_001054455_1_32_1	-	95646	.	2F9C_A	Hypothetical protein YDCK	MKEQQKKYELTDEFIEHWSGKKLYRIRALVAFGFVMAGQLGGFVESEKNLDQSLSGNAWVYGDA	hhsuite_tools	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	235	417	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	236	418	GCA_001054455_1_32_2	GCA_001054455_1_32_2	-	95646	.	PF06289.11	Flagellar and Swarming motility proteins	MGKEITLTLLEGLKKAQVCADSIFYIKPVGDNSFVSTTDGKSLFVKESKSRILKMIETAK*	hhsuite_tools	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0002	cloud	direct	high	182	0.995	GCA_001054455.1_01392
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	427	840	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	428	841	GCA_001054455_1_32_3	GCA_001054455_1_32_3	-	95646	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MSVNKCLFIGNLTAGPEIRTMPNGEQVANFSIALNERYKAKDGNVVENVEYVRIVLYRRLAEIAGQYLHKGSQVYIEGRLKTRKWQDNNGQDRYTTEIQGDNLQMLGGRQDWPKQSKPEPLSAMAEQDDGFSDGIPF*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0003	cloud	direct	high	413	0.998	GCA_001054455.1_01393
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	850	1506	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	851	1507	GCA_001054455_1_32_4	GCA_001054455_1_32_4	-	95646	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MELQSANLSELMPELIQAISQLGNLSKDKQGYGYKYAELSKVLDTCRPILAEHNLVITQLVTVLNDEPTLVTTLFHKSGQFLRSCYPLVKAGVKQANDAQQVGAAITYARRYALTAMLFMAQEDDDAASVGKREQPSSPKSERPNNSNKSTQQNVNSTPSEHYHDDVENLRKRLLGKTKEQIESEQLYDKSINWLKENNPDLIDEYNLMFNDFLGNLL*	mmseqs_cdd	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0004	shell	direct	high	656	0.998	GCA_001054455.1_01394
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	1517	2017	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	1518	2018	GCA_001054455_1_32_5	GCA_001054455_1_32_5	-	95646	.	PFAM:PF05565.10	resistance-protein	MKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0005	shell	direct	high	500	0.998	GCA_001054455.1_01395
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	2027	2170	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	2028	2171	GCA_001054455_1_32_6	GCA_001054455_1_32_6	-	95646	.	.	hypothetical protein	MEETPRERLESKAELLNAIRNWLWQERITPEELQAEIEYIQQNPLPF*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0006	shell	direct	high	143	0.993	GCA_001054455.1_01396
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	2173	2337	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	2174	2338	GCA_001054455_1_32_7	GCA_001054455_1_32_7	-	95646	.	.	hypothetical protein	MKRTTLSPWQCDNPYDYYAQFETESIERDEPEEDWREPEDADCEYWQSNCYGRG*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0007	shell	direct	high	164	0.994	GCA_001054455.1_01397
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	2300	2881	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	2301	2882	GCA_001054455_1_32_8	GCA_001054455_1_32_8	-	95646	.	.	hypothetical protein	MSNKSKPKLTALGVNNETDLQNLRRICSKSGSYFGELWVNNKLYQKTAYFANEAIATLRLNKRIENFNAMENTKIPPYQKDAETNQFPAAPKKSAVEKEVVITKPQGLTLTQPKINVKTKNKPTTPRRKPFTPYGLNGYFMDKQGNIRLHLDRKAHAHTIVLNPEMFSMLANMVQATQEQSNETHNTISLAMR*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0008	cloud	direct	high	581	0.998	GCA_001054455.1_01398
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	2835	3134	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	2836	3135	GCA_001054455_1_32_9	GCA_001054455_1_32_9	-	95646	.	.	hypothetical protein	MQKFTDVFAETIPFLCKTAIAFTLAFLIGGIAYCFADEPTDWHDNTLSEQIQQEARAKAKAQWREENGIYQANLTPQVNADMYRYVEQKQAEINRTWSK*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0009	cloud	direct	high	299	0.997	GCA_001054455.1_01399
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	3226	3882	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	3227	3883	GCA_001054455_1_32_10	GCA_001054455_1_32_10	-	95646	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MSALTIFNFENTPIQTIVENNEIFFRATQLAELLQYKNPHKAIKDHVDPDDLTKREIVNTINKRAQVLFVNESGMYSLVLSSKLEQAKKVKRWVTSEVLPAIRKTGKYQLHPQQLALPEPQKFTFEFTEYELQQLAWLWFAFKRGVGTFQHIEKAFNVLGSNMSGQIYGQAYEYLSVLRSTNKILNRITSDFNIDPMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0010	cloud	direct	high	656	0.998	GCA_001054455.1_01400
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	4132	4929	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	4133	4930	GCA_001054455_1_32_11	GCA_001054455_1_32_11	-	95646	.	.	hypothetical protein	MVAETHYTIDKNMKLLIEIDNSEPLQLSTFCQSMEGIAAEYRQFIQDNKIDIEPCEQHIYVEKITQGCFLVELAALVSSTYPLIEQANAILEFGGHLKMIFDWAMNKGERPERLTPAMLKNASNILEPIAIDPKAQFNLQVTDNKGDVHIYLQGDNALAGLAQNNINRELRLLKERDDNTLHNTPLYWSSTADAQSKAQDRAIIPAVSSKPVRVKFEDKTLKEKMILNEEYPYHKIFLVDVLVEYIDEEPVIYKILRLNSSMNKI*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0011	cloud	direct	high	797	0.999	GCA_001054455.1_01402
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	5215	5700	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	5216	5701	GCA_001054455_1_32_12	GCA_001054455_1_32_12	+	95646	.	.	hypothetical protein	MTNDSEFSLFYAHNLTKIYGTFNSRIANIITFIQILFGSSLALDVTKTFPLLSDYHWTFWTGAIVTATAILSFVYKFDEKALLSNQLYRQYGSIISKYRHNPTLDIDHEMLNLPIDEIKIVGAFEDIAYKRTAIQLSRGDYTKLDYYQCFIAYFSGDSFND*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0012	cloud	direct	high	485	0.998	GCA_001054455.1_01403
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	6691	7212	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	6692	7213	GCA_001054455_1_32_13	GCA_001054455_1_32_13	-	95646	.	PFAM:PF10779.8	hemolysin	MKSKFKDENISSAPYDQFYQGGNIPSSNIKGETLYMRDEAIFTDYTFRMSELEKSVFRIDKDLGEIKSNYASKEYLSEKLNSNFKWLLAIILGVAAGGYALHWDTQKETNQRFLQVDNRFQQMDEKLHSTDVRLTKVEVKLDSIDTRLAMVEKKVDSIDDKLDILIQQKQAKR*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0013	cloud	direct	high	521	0.998	GCA_001054455.1_01405
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	7202	7639	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	7203	7640	GCA_001054455_1_32_14	GCA_001054455_1_32_14	-	95646	.	.	hypothetical protein	MTKKDVFYRISGDEFAEFLNHKGASLNTFRCPVCGNESHSLLDCEDVINGETDKPLTPQRIVYQPTLSGTQYPGLVELRTMIEQGNVPRAQYSSLASEFGIIIGTQHYSAPVIHLICDNCSYVRTFRKNKILEYLNSKEDNPNEI*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0014	cloud	direct	high	437	0.998	GCA_001054455.1_01406
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	7685	8344	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	7686	8345	GCA_001054455_1_32_15	GCA_001054455_1_32_15	-	95646	.	PDB:2FJR_A	Repressor-protein-CI	MKSETIGKRIRQRRTELKLTQKDVANAIKGVSHVAISQWESDTTKPNSENLVDLSTVLECDLLWLLRGEGSSSNVIPASIGANKVPLISYVQAGTWTGIDDLKESTGDFNYIYTFIDTSDDAFALEIKGDSMEPDFKAGDVIIIDPHIEPRAGEFVAAINGDYEATFKKYRPIGDIDELGRHHFELVPLNSDYPTLSSLKQEIRIIGTMVEHRIYRRKR*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0015	cloud	direct	high	659	0.998	GCA_001054455.1_01407
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	8448	8630	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	8449	8631	GCA_001054455_1_32_16	GCA_001054455_1_32_16	+	95646	.	pfam14549	DNA-binding transcriptional regulator Cro. Bacteriophage P22 Cro protein represses genes normally expressed in early phage development and is necessary for the late stage of lytic growth. It does this by binding to the OL and OR operator-regions normally used by the repressor protein for lysogenic maintenance.	MLKNDVIAHFGKLENVAKALSISVAAVSQWKDVIPEKNAYRLQEITNGKLKIDRELYQKS*	mmseqs_cdd	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0016	cloud	direct	high	182	0.995	GCA_001054455.1_01408
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	8685	9125	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	8686	9126	GCA_001054455_1_32_17	GCA_001054455_1_32_17	+	95646	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKQTIIEMIEKVPGGKSAVAGFLGFSEAELNNRLYQTKGQRFKNEELIALQLEYGCTDFIDELCRLAGGRFVPDVAEDELDKVELANLQLHELSARGLLFAVLETALEDGEITSKEEDKILQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0017	shell	direct	high	440	0.998	GCA_001054455.1_01409
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	9174	9404	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	9175	9405	GCA_001054455_1_32_18	GCA_001054455_1_32_18	+	95646	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MENINPNETTSQTQSAQILKALKNGERLTHLDAEKRFNCLRLGARIYDLKKRGHNIISKMITVPSGKRVAQYWLEA*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0018	cloud	direct	high	230	0.996	GCA_001054455.1_01410
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	9406	9564	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	9407	9565	GCA_001054455_1_32_19	GCA_001054455_1_32_19	+	95646	.	.	hypothetical protein	MKRLFSPEFVASLDDRERILAYEAVKRELRERNASQKEYDRVTDQAIEELEI*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0019	cloud	direct	high	158	0.994	GCA_001054455.1_01411
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	9561	10319	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	9562	10320	GCA_001054455_1_32_20	GCA_001054455_1_32_20	+	95646	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCEVGNPARKLVLLKLADNANDDGVCFPSYQYIADKCEMSKRSAISHIDDLIKMGFVTKKARKNKDGSSANLYLLHLEQGSEKSALGGEKSALGGGEKSAPITSHSFNLSINRISDDEISANAEHADEKTKTSKRGKISVDYQGVMNAWNEVFNGSPIHLLKTLSPERKKAILKVAKTMLETEDVGSCSVEVFKEYFKDFLNQANSRANKFFFGGLDGNGWVAKFKYIMRPETFLNTFEDSL*	mmseqs_cdd	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0020	cloud	direct	high	758	0.999	GCA_001054455.1_01412
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	10316	11701	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	10317	11702	GCA_001054455_1_32_21	GCA_001054455_1_32_21	+	95646	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MINTTDNTTYNLEYGLISSMLATGLTAQAREVISWLEPEMFATYNLGALYANIRKQARKHDLIDFLLLSQDYGENLATLAEMANKATYGGNLLGYAKKIHSSWVNRSAQQTMLKLAGEMSQVRNESQVNELTQKALNQIQKLLVSKTEIKPVAMGELMDSYIDVLEKRSQSDFKERLLYTGIEAVDNILGGINSTDIVVVAGRPGTGKTEFSLTLTRNIAKNNGSVLFFSLEMGNFQLIDRLLSAVGGVGVKKLRNPQELDDLDYNRLTNAITDIREQKVYFVDRGGLSADEICAITERHLSDVGSLSAIVIDYLGLMDHKQGNNINLTQAIANSMSKLKTFSKNFNIPIILLCQLNREVDSRAVKRPANSDLRDSGSIEQDASQIIMLYREGAYKANTDNPYSEAIITKNRFGELGTAYMKFEKGHFLDCDQAKAYQDLNEKPQQAPKSYAKSYGKGAIQ*	rep_hall_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0021	shell	direct	high	1385	0.999	GCA_001054455.1_01413
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	11701	12114	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	11702	12115	GCA_001054455_1_32_22	GCA_001054455_1_32_22	+	95646	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MDKKQFFLRSNQVRLNCIEFIKELPTDDKKPLVVKIQPMTRSLEQNSKLHALLSDISKQCEFNGKKRDIETWKMIFVSAHKIATGGQAEMVIGIEGEVINLRESTAQMSVKRLASLIEYVQAWGVENGVKFNDKWEF*	mmseqs_cdd	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0022	cloud	direct	high	413	0.998	GCA_001054455.1_01414
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	12118	12342	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	12119	12343	GCA_001054455_1_32_23	GCA_001054455_1_32_23	+	95646	.	.	hypothetical protein	MRMLIFILIIAGCFAIGYLSRSSVVFIALVLSFLSFALGINVYSDYVYEKALNGELLDVKKKYYELKYVKDKVE*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0023	cloud	direct	high	224	0.996	GCA_001054455.1_01415
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	12495	13079	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	12496	13080	GCA_001054455_1_32_24	GCA_001054455_1_32_24	+	95646	.	PFAM:PF05766.11	NinG-recombination-protein	MVVAMNKPKEHKCKVCGCYFVKTISSTQKVCSPKCAIVLSKEQARKKREKQDKQEKAQLKERKKKLLENDRGHWLKALQKEVNKFIRLRDKGQPCIACGAAWKPRFQASHFIPQGRSSFLRFDERNINSGCIRCNLFVGGGNIHGYRPRLVEKIGEKEVEWLEENQHRIKKWEISELKELIKVYRAKIKELENE*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0024	cloud	direct	moderate	572	0.978	GCA_001054455.1_01416
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	13072	13593	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	13073	13594	GCA_001054455_1_32_25	GCA_001054455_1_32_25	+	95646	.	PFAM:PF06576.10	anti-termination-protein-Q-like	MNKFSEIPELDYDQVQFVDNRMYSWGGWINSGRLDKPELNILYKLMKSVEPRDEPSSAICDDELGMMISEQVEMFFKKYDERMHFILFSYYVHKSTPNKIAVKLREREEPQYMQPCNGKRDIRIPCLKTCKRRVEKDLALMKAIIYDILIKIEVKLAIESEKRKNIKKIRFIY*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0025	cloud	direct	high	521	0.998	GCA_001054455.1_01417
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	13841	14200	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	13842	14201	GCA_001054455_1_32_26	GCA_001054455_1_32_26	+	95646	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPMKDPDVWALIWAWLQINFGNGSIQSAGAAVFMSLLRMGFMRKKPAFRYVFIDAMICASIAGVAVPVCTHIFGHADFSAFFGTMIGFIGTEKIREFLFKFINRRIDKDDNDYSRNDIQ*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0026	cloud	direct	high	359	0.997	GCA_001054455.1_01419
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	14166	14759	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	14167	14760	GCA_001054455_1_32_27	GCA_001054455_1_32_27	+	95646	.	PDB:3WH1_A	Chitinase-	MTMIIPETTFNKVFPKAIKGVYQAISKHIDLAGCFNKQQQAMFLAQCGHETAGFTTFSENLNYSADGLMRVFRKYFPNLNIARQYERKPEKIASRVYASRMGNGPEETMDGWNYRGRGLIQITGKDNYIRFAHWLGDTISPKEVSSNLDLAVKAAVWYWIFNDLASIDSVQKVTLRINGGTNGLDDRCRLFRALMVD*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0027	cloud	direct	high	593	0.998	GCA_001054455.1_01420
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	14773	15093	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	14774	15094	GCA_001054455_1_32_28	GCA_001054455_1_32_28	+	95646	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MVNKSTLIYLAVLASLCGWIWYQHGAINDLRAKNQAQASLIAEQEKVNQSLKDTIEVERQAVEQQRAINDEIKQATQDKVQIVRKIIKSQPCYNTRIYDDAIERLH*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0028	cloud	direct	high	320	0.997	GCA_001054455.1_01421
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	15065	15289	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	15066	15290	GCA_001054455_1_32_29	GCA_001054455_1_32_29	+	95646	.	.	hypothetical protein	MTMLLSGCTNKITTKTEYIYPPQAFLTPCIKTPFTGSTYGEAVEHLIIVQGERDMCASQITNINKWINRTKNDK*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0029	cloud	ambiguous	low	30	0.133	GCA_001054455.1_01421
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	15415	15933	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	15416	15934	GCA_001054455_1_32_30	GCA_001054455_1_32_30	+	95646	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MQILKAPFFGTEIVVVEYDNKPYVPMKPICENIGLAWHAQFERLKRKEVLSSGIRIIRTPSNGGEQESVCLPLHYLNGWLFGIDTNRVKPELKEKLIRYQKECYEVLWDYWTTGTTRRDEIQERLNRLLEDEGKSRANGSIAGKLLNQRKQEKAHFEAELAKLKQMDLFLDI*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0030	cloud	direct	high	518	0.998	GCA_001054455.1_01422
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	16315	16722	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	16316	16723	GCA_001054455_1_32_31	GCA_001054455_1_32_31	+	95646	.	PFAM:PF07141.10	terminase-small-subunit	MTEQKEKNKGGRPQKNLTGEQLVQVEALAAFLTIEQIADYFEITKPTFHAICERQPEVFLRYKKGRSNAVESIAKSLIQQAREGNLSAQIFYLKTQGGWRETNNVDLTSSDGSMTPKTIIRKVVDPKDGTGDSNA*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0031	cloud	direct	high	407	0.998	GCA_001054455.1_01423
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	16697	17920	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	16698	17921	GCA_001054455_1_32_32	GCA_001054455_1_32_32	+	95646	.	PDB:5OE8_A	Large-Terminase	MELEIQTPRWFLPFIQPCRYKGVKGGRGSGKSHTVAEAQVERAIIDPNYRLVCIREIQKSLKFSSKALIESKIRQFGVSHLFDITMNEIKRVDGEGIMIFQGMQDHTADSIKSLEGFDCAWVEEAQNLSYRSLQLLRPTIRKSGSEIWFTWNPDQESDAVDEFFNSAIANQADGFTLAHVNFDQNPFLPDELLKEMEYDRKYNPATFGHVWLGEYNIKSDAQIFAGKFTIDEFSPKEDWHGPYQGLDFGFAQDPTAAVRCWVHNDELYVEHEAGKIGLELDDTAPFLMKNIPDFEKYVERADSARPESISFLRRHGLGRIEAVSKWSGSVEDGIEHIKSYKRVVIHPRCENTAREFRLYSYKVDKKSGDILPVVLDQNNHYIDALRYALNPLIQTKNAAGLLFSSRG*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0032	cloud	direct	high	1223	0.999	GCA_001054455.1_01424
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	17921	19312	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	17922	19313	GCA_001054455_1_32_33	GCA_001054455_1_32_33	+	95646	.	PDB:4ZJN_A	Portal-protein	MNIEKQRQDFLATIYGLGNQKRRTLWAECGYPQNLSFRHYYKAYTRNSVGFAAVTRLSDGCWVDVPTIVEGAKGNESNKTSAWEKRADKLFKKLWKSIKEADKRNLVGQYSALIIHVREEGGAKWESELLPGSLAKLEELALVKLIPVWQEQLTVAEYQTDLNKEDYGEPVYYQFNESAVGKSKKGRSIKIHKSRIILLNEGGDDNQPETGVPLLEPGYNKLLDLEKTSGGSAEGFLKNASRQLSIKMSDNVDLRELKRQAEAMGYNDVVGAINDQIQRLNNGIDSALITQEGDASVLSVAAVDPTSTWTVAANEFAASIQIPFTILFGQQTGRLASDEDKSDWANRCNGRRNGFLSEVITQILERFWTVGIIPPPKSGEVTISWSDLLAPSERDKIANAKELATVATTSQSAYGMSVIKPNEIREVLGYEPLKDDEMPPTVKEEIDPLDYQQEDKTPTDTEK*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0033	cloud	direct	high	1391	0.999	GCA_001054455.1_01425
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	19329	20201	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	19330	20202	GCA_001054455_1_32_34	GCA_001054455_1_32_34	+	95646	.	PFAM:PF06152.10	minor-capsid-protein	MGQEIAKSFKRIDQIFKQIKIEVRQLLDSSLTPRFKTNALEEITSTDLAELLETIQRILDRNLLSGAEDGGQLWIDAFIDTATKKGTQSAVTDLTLQSETYRNSRNLGSILFNPQYMKTLSIAHTANYATWKGVSAAVRKELAEIITEAIFNGDNVKVTARSIKDRLNVSNRRAKLIAQTEQLAAYRRAEWAEAEEARKELGLNTKLLHFSALKPTTRLTHAARHGKCFDVDEVKEWYSKDGNRFNCYCKQSVIVLNKDGKSDIEPLLKSLSDERENWVGALRKKRNEEK*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0034	cloud	direct	high	872	0.999	GCA_001054455.1_01426
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	20188	21549	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	20189	21550	GCA_001054455_1_32_35	GCA_001054455_1_32_35	+	95646	.	PFAM:PF09979.8	head-maturation-protease	MKKNNINVLSVLNSRNITEETIDGEVHIVIKGVVPLVDDVVMNGGLYPAAEIDKSYATLDGNAMPLGHPVIDGKYVSASDVRAVNKHHIGAWARNARKENGKVLVDMCINKRFAESTDGGKRLLERLDDLTNNAEAKPIHVSTGLILNKKDDSGTSKGKKYNWVATNMFFDHIAILLDQPGAATPDDGVGIFVNSDGANLDVENVDLGTAADCRKEGWLNKVKFYLSVNSDLAFEEISRALYELVNKQSGGNYKAWIESVYPKYFIYEYDGKKYKQPYFIGDDNQIELTGERVEVVRRVGYEEVKTNGEQNSMKEKIIAALNAAGVKVDGLNDDELLTAYNELQAKPKDEKKPKDGKPEEKPKDDELEEKIKKAVNAALAPITAKLEANQAEELAKKRAAVKAHFGLDDSAVNALEGEALNGLYAKTINPNGINGAMGALNADDDLLNMEAPE*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0035	cloud	direct	high	1361	0.999	GCA_001054455.1_01427
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	21549	21986	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	21550	21987	GCA_001054455_1_32_36	GCA_001054455_1_32_36	+	95646	.	PDB:5WK1_L	Capsid-Stabilizing-Protein	MAKLRYHTIIAGPARKNDPQTIDAPTAEAIQPGALVFLDAGKLKKHATAGKSTQALVMQTNYIAGGDIRNDVPLGATGVAVICEQDVDYYVRVKQGESLKVGDKLTSNGDGTLKKAGASDEAIFIARETYTVASDGVELVKVRKA*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0036	cloud	direct	high	437	0.998	GCA_001054455.1_01428
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	21996	23054	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	21997	23055	GCA_001054455_1_32_37	GCA_001054455_1_32_37	+	95646	.	PDB:5WK1_D	Major-Capsid-Protein	MNRIVFNKELVTNSAQVKQAWEQLLLQRQVFNVNQQNLANTYQNSLAVNQAALVDKEYWREVDSITTRVFRDDQGNPILNDLLSLGSSISIGKTVAMYRVSSDAGVVSRSMSGQVPESMDKVIYDQYGDPIPIFSTGYGREWREWQGMQTENIDAMSDDQEAATAALRANMAQYVLLGDENLKVANFSAKGITNHENTNQINLGSSGGLNIDLSTADGDKLIAFFTGDFAKVLDDNLVGEKVKVWVSPEINRNLDRPYSNANGFKEGTVKDYILRYGRVDSIEPTFALKGNHFVAYVRNQQYIKTRIAAPVGTFLIPRQNPFDNYNSVVWSAFGLQIKRDFNGKSKVFNAKG*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0037	cloud	direct	high	1058	0.999	GCA_001054455.1_01429
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	23096	23293	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	23097	23294	GCA_001054455_1_32_38	GCA_001054455_1_32_38	+	95646	.	.	hypothetical protein	MKLIKVIKRGLYGVVDGELLALPLGMELKVDEVPEAYIGRVEVLNEADGELEVATGKINKKSKGE*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0038	cloud	direct	high	197	0.995	GCA_001054455.1_01430
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	23297	23668	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	23298	23669	GCA_001054455_1_32_39	GCA_001054455_1_32_39	+	95646	.	CDD:cd08053	head-to-tail-adaptor	MAVQIEIEDAESMLSSLGFAPPDTLLELYLAQANSLSEKFANADYMEATQKLIMLYLVAIFAISSGARRIASESSASGASRSFNYADDVAKLKAAIKGLDPLGIADDLLPQDKKTGLFVVVEG*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0039	cloud	direct	high	371	0.997	GCA_001054455.1_01431
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	23671	24018	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	23672	24019	GCA_001054455_1_32_40	GCA_001054455_1_32_40	+	95646	.	PFAM:PF10665.8	Minor-capsid-protein	MSSTANWSYTAQATIWRCLGRNEDGILTFDRPVVIKCDYGMNARKGSLDIGRERVIKNTIWTEYGKASVGDYLLIGKSSEADPISAGAEEIIHIQRFADTFERNADDYALFTGGD*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0040	cloud	direct	high	347	0.997	GCA_001054455.1_01432
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	24018	24386	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	24019	24387	GCA_001054455_1_32_41	GCA_001054455_1_32_41	+	95646	.	PFAM:PF11114.7	Minor-capsid-protein	MGITINGIAQAKRQLAEVIGETASVKANRAMFRILHIVAPLAAKYTPIDTSTLINSQYSEVMVNGAILTGRIGYSANYAIYVHDPNVKQIFRKPGAKKEFLSSAFKESESAFEGIIKEEMGL*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0041	cloud	direct	high	368	0.997	GCA_001054455.1_01433
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	24383	24757	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	24384	24758	GCA_001054455_1_32_42	GCA_001054455_1_32_42	+	95646	.	PDB:5A21_G	tail-completion-protein	MISFVKALKAWIEKSGLFQGYDIQLYQWEDKKGGPYVVIQSNGGGSQISTLGSEHYLLVSLIASKAMGFTIEAKAIELINYALSNPVSNFGYIENTGGIPQPIFTTDNRMILRLQFRIIYTKEE*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0042	cloud	direct	high	374	0.997	GCA_001054455.1_01434
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	24760	25239	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	24761	25240	GCA_001054455_1_32_43	GCA_001054455_1_32_43	+	95646	.	PDB:5A21_H	major-tail-protein	MGQAQTIDTSKMVGRSVVLEYANQDAKPQDAEWKAAGAMKTKSWDFSPNTVTSEADDAGGFPESLVTNSDFSISGEGEWRQRDKEGELGINALVALYVKAIKERKQPFVWVRLKYGTMTIIGKMIITALSSEAATNDLVTFSIEFKVGDASTLEITTTA*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0043	cloud	direct	high	479	0.998	GCA_001054455.1_01435
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	25292	25963	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	25293	25964	GCA_001054455_1_32_44	GCA_001054455_1_32_44	+	95646	.	pfam19759	Family of unknown function (DUF6246). This family of proteins found in bacteria and viruses is functionally uncharacterized. Proteins in this family are typically between 205 and 235 amino acids in length.	MQPITEIGEMMITTKQKSYFLKPSFKNIYHLGNSREIVRIYAELHGQEIKDAAQKILTSKSPVFQNYALKKLNSPIFGRKILANAMNVIACCCDDDTDPLIGYWVAGKGGVKYRKGALSIEQIILLAQSLMEHGIIGRAKLDLPPPSESKNNYSDEFNIIEYISLARTHFCMTREEAENLTMTELQELLKSQMPKKKESLFTEEEYNAIMDEYEREKAKAIGD*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0044	cloud	direct	high	671	0.999	GCA_001054455.1_01436
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	25966	28317	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	25967	28318	GCA_001054455_1_32_45	GCA_001054455_1_32_45	+	95646	.	PFAM:PF06791.12	tail-length-tape-measure-protein	MQVGEIHFEVDMDTSKLMEATGKVDQAMESVEKSTKKAEKGFKNVENQVNKTTQAIRNSTGDMGKFGSVLKRLGIAVADGNLDVKELATAIGGLGFAFGGLAGVAVAAGSAIVANFISRLSSSKSEVDNLKSALNDLDKVIKFSESGVAGLSNEYAFLAKSNSTLAQNLKQAAINEFTFKVRNAKDAITEIAKEQSSWFTGAAGGQVSVENMGKSLANLKITTDDYNTALKQTGYASDEMGRMISSNITATVTHLSKEFAISADEAFKFGKKLAEAGENPTPERVNELITYLNTLKGSTSEGEKALGEFRNKLIDSATTIAKVTEYLKELKGEMGALASAAQNSNFESMKRSLEQQKIALTQGAAAAKQYAIEHANLNDEQKEILVAMSNENAKLEEQKKAREKAAKAAESEGKKSESAHRQVAEQLVRLEEQYKVAQARQQGFNIEAVKMEARMRLGAAATEAQKKKVEELAVAMYSLSTVAKNFAALQAQQSPVIALEQQYQQQMQQLEEYKTLYPQHIEEAEAVRSSIEDQYRKQRLDAQWDEWKQSSDGAKMFGDAVEAMAQGATGALAGIMSGTMSAREAFQSLANVVLNSVIGSIVEMGMAQVKSMIMGQAAAKAAVASQMAEAAVLTAAFTPAATMVSLATQGANAVGAQAAITSTAAVAKAAAITGRKNGGAVSANQMYRVAENGQPELYQAKNGMQYMIPGSSGRVYSNKDMRNSTSGPQGGVTVIVNQTNHFSESESAVGNEQNLAKQLGDQIKSAVRTELTAQMRSGGMLSR*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0045	cloud	direct	high	2351	1.0	GCA_001054455.1_01437
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	28317	28643	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	28318	28644	GCA_001054455_1_32_46	GCA_001054455_1_32_46	+	95646	.	PFAM:PF05939.12	minor-tail-protein	MEKFTFKVNLNSPVSYEPNIKSIKFGNGYEQVIQDGINHNLRKYQGLTIAVNKDKGREILAFLNRHGGYKKFQWECPTGETIFVRCKTWTHTPHWAVDEFSLNFEEVL*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0046	cloud	direct	high	326	0.997	GCA_001054455.1_01438
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	28714	29085	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	28715	29086	GCA_001054455_1_32_47	GCA_001054455_1_32_47	+	95646	.	7TXX_A	Bam complex, outer membrane biogenesis	MKKLLSITLFSVILSGCVYSSNYESGARIDETKVQEIVKGKTSEQQIVQWFGEPQFKTVLNDKDTKYVYTHTESSASAQAFTMNTTMSSKQTTLDVLIRDGVVLNFALQKSDMAPKMTHNTKL*	hhsuite_tools	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0047	cloud	direct	high	371	0.997	GCA_001054455.1_01439
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	29117	29320	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	29118	29321	GCA_001054455_1_32_48	GCA_001054455_1_32_48	+	95646	.	.	hypothetical protein	MCVFYLSDIQRVFDIRSGKDVGDIAEYFSQLNQSEDKKKSNNPPIGKILVVAFILFFIAYIFLFTKN*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0048	.	unmatched_CDS	none	0	0	.
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	29561	30247	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	29562	30248	GCA_001054455_1_32_49	GCA_001054455_1_32_49	+	95646	.	.	hypothetical protein	MSNKKCNVFTSNFGTLPLRFTLKDGELFVSKSDLTKIFYEFYPSDYRYIVEELMNKGITQIIGDKSDVVSVVIGESKIGAAIHFHAVGNLLHFCSELIDVDDEIMRSAAFQASTFTTWYIGTLSNANSYFGITIEDTLMSVKKRLDKINPPYIVEVMYDVEDNIPAWIGTCDKLHLVTEGRTYEELQQRVWEIAPEMHELQGYGSESDNIRLAFIQTESHADFQRLEM*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0049	cloud	direct	high	686	0.999	GCA_001054455.1_01440
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	30250	30447	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	30251	30448	GCA_001054455_1_32_50	GCA_001054455_1_32_50	+	95646	.	PFAM:PF07927.11	toxin	MGSGYYDQLIKILKQYGCTFLRQGKGSHEIWNSPITQKPFPVAYTITNRHTANGILKQAGIDSKI*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0050	cloud	direct	high	197	0.995	GCA_001054455.1_01441
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	30743	31642	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	30744	31643	GCA_001054455_1_32_51	GCA_001054455_1_32_51	+	95646	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANQISTQTISFNHQSLVTFKQNGTYYTAMKPICENIGLDWKSQYSRMKRDDVLNSTMVIITIVAEDGKKREMICLPIEYLNGWLFGIDINRCKPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLIHQRFNVESIEDLTLEQLPQAVEYVHKIILEGELITDPELPSSEKKFSFEFTEYELQTVAWACFAFRRNNNLLHELYSPLAAIGSKFAVEARDNAVEYRNTLRRFNEVVKRITVDIEADPETNWRVLKHIRSFNEKIFGKVETTI*	common_virus_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0051	cloud	direct	high	899	0.999	GCA_001054455.1_01443
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	31702	32439	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	31703	32440	GCA_001054455_1_32_52	GCA_001054455_1_32_52	+	95646	.	PFAM:PF05100.11	minor-tail-protein-	MPKKLPDKMTALLPELEQGALIELWEIDLRHISSSAEPSTKGELLRFHNGLNQSQVNLWWQGNEYQAYPIKADGFEISGQGPSNRPTLTVSNLYGLVTGIVAHFGQGVGAKVTRRLVYAEHLDAKNFPGGVNPNADPNQEVRSYYIIEQLKSLDDQQATFELASPAETDNAKIPLLMITSDTCIWQYRSAQCGYTGGAVADEFDKPTSDIKKDKCSHCIRGCKLRFGDNAILPFGGFPSTTQYGN*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0052	shell	direct	high	737	0.999	GCA_001054455.1_01444
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	32442	33200	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	32443	33201	GCA_001054455_1_32_53	GCA_001054455_1_32_53	+	95646	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MIDDKLKQEILAHAEQCKPQESCGFVVFDGKQNIYIPCVNISPDPINYFEIAPEEFIDAEEIGKIIALVHSHPSFNDERGLPYLSTADRECQVRLDLDFWLVVDGDIKCFRNVPPLIGRQFENNKQDCRNIVLDSYMLSGIDLDDKSIYPFDWFKSSNLYEEGLQRCGFYKLMQEDDVQLGDIILIQVGADVANHAGVYLGNQMMIHHSEDRLSARVPYNGFWLKHTHSIWRFRDWYKLNFTVILNDLQIAR*	mmseqs_cdd	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0053	cloud	direct	high	758	0.999	GCA_001054455.1_01445
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	33146	33733	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	33147	33734	GCA_001054455_1_32_54	GCA_001054455_1_32_54	+	95646	.	PFAM:PF06805.11	tail-assembly-protein-I	MVQVKFYGDLKRFADSPIELEVSNFKELMSGLFTQIKGLRQHIRKGYYKIRVGSKYLSEEQLKTTPIIDLKDGCTVHLTPVVAGAGKGGNVLQIVAGVVLMVIAWYAPPAWGMAATMMGAMGASLTLSGVVGLLTKPPSMSDYSKEGEKKQSTSFSNIKNLTPQGRPIPLLYGKMLTSLVLISQGVETFDDMPTK*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0054	cloud	direct	high	587	0.998	GCA_001054455.1_01446
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	33793	37656	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	33794	37657	GCA_001054455_1_32_55	GCA_001054455_1_32_55	+	95646	.	PFAM:PF13550.5	tail-protein	MGGSSKGGGGHTPHEAPDSLRSAQKLRAIGLISLGPIKGPANKWKDTYFDNTPIQNANGVDDNDAASFNFKNTEIQYNLGYQDQKPLEGFEASEREVSVGAEVKQQHPITRSVIDPDVTRLRLTIGINALISQNDQGDTNGTSVDFQILINNTPRGTYQIEGKSSSRFYRSYVIDDLPPRPFTVTVKRVTADSKSQRLQNGTHWVSYTEIIDTKLSYPNMAIVGIKTDSRYNPNFPNINFLLYGRIIKIPTTYDPEARTYAPGLWRGDFKLGWTNNPAWIFYDLITDKLAGLGERIGDFGIDKFMLYEIAKYCDELVDDGYGGKEPRMVSNLWITEQRDAYNVISDMASVFRAIAVWDGTQFTAIQDRPTDPVCLYSQSNVVDGKFSRQYTAGKAIFTAVEVEYADERNLYQKAIEYVADDSMIARYGYNVKKMTAYGCTSRGQAHRYGKWVLETSRLEQCTITFAVGRQGLMHLPGDIIEVADNNYAGKVLGGRVVAISGKKVTLDQPVEIKGESYLNYITTDGLTKIKIKSVDKVNPAIVELDSVPQGLSIFDNWVLKSGVVSTQLYRALGITENDDGSYTITALQHEPQKQAIVDGSASFVPSVTTAHGAGVNKPANADISFGDGGVKLTWTTPTNQGAVKYDIKLYRNGNLYSTHLDLDSPEISFDNLPSGSYTVEIRGKNGLGQLSDPVTRTFEINLNIPRFVTKSLLFAIELDWDLPKTATVGNYTEVWRGATNDISKAVKVATLPYPQNNYVMSGVPLSAEYYFWLRCGDKNDNKGEFTAAVFGEADHNPDNLLNALEGKITKSQLGQELINSIKADINNAVGEEAKTRQTAVAGALAQIAAQAQSSGTAIKNLEKTDQAQAETIKTVTAKAESALSGITAVRQAQAQSDKANAQQINALTAKVGKAESTVSQVSSAVAGLNGKVSSMHTIKTQAIAGGRTAVAGIALGANQDESSVIVMADKFGIVANANDGNVKPVFSVANGQVGIRGDLFVAGSVTRDKLSAGSGGNLLYNPIFANVKNDGLPHGCSWWGSSTARNLRADSKQANDAWGLTYYLPGENQLIFNIDGDSSASGTVAMQSAPVLGNKWYILSAYIGAHRSKAKLTARCHLKEGGYKDFSSEDIIGYSFSGGLSGYTKRAFVKFKAPSDVERITPIFWVISNSNESNKHLRVARPMLEECTEYTTEPSPWNNAGLTEVHGGSIIADTIRGNHIMANQEIRAPRITGGEIDISGNDGILRVGRTGNFLVRASSQNRGLVMNNDQIIVYDDRGNVRVKMGRL*	hallmark_hmm	common_virus	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0055	shell	direct	high	3863	1.0	GCA_001054455.1_01447
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	37656	38099	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	37657	38100	GCA_001054455_1_32_56	GCA_001054455_1_32_56	+	95646	.	.	hypothetical protein	MANYGFEVCNADGIIRDKVTSKFARIIAKLHVPLIVAYDYAYQKAGSGSFIVNELLNIPKGYIPFYFISPAELNGCFYPNVKISGNLISWDFYIYDRELFPRNYDKKNGVSDLFGDNPVGFDSTDVAPKRTAIFGGCYINVGICPDA*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0056	cloud	direct	high	443	0.998	GCA_001054455.1_01448
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	38092	38877	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	38093	38878	GCA_001054455_1_32_57	GCA_001054455_1_32_57	+	95646	.	.	hypothetical protein	MLKISSEDAINIIDDTYKNYHLRKSGVLYDKDFEINGMTKDCYIPCVGFNSPIIVIHPRGHDYNSKVTYVPVSRNMTNKDYINSEYRNTFGFQIYVWWNLHVNEGIEYYIFDDWQPETAKYGLTLWNEKGEIIYHSDWYRLKLLGMHQLGRAGPSISNDLKIDISKFSNLSNKVGILMPFVRRCMMGGLPGQYLPPAGGHNTFNNYELGEGFFFKDKNTIQYSWVCLSGIDGWWFSWDQIITPPSSFILTVDLDGMPLNYN*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0057	cloud	direct	high	785	0.999	GCA_001054455.1_01449
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	39039	39365	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	39040	39366	GCA_001054455_1_32_58	GCA_001054455_1_32_58	+	95646	.	.	hypothetical protein	MKYISKQIEDIRTGAMSEHHAVTGLQVDYVNNSTFVTIASYVSKAKKDEGKESLSVNTFTIQAVPGWEKIPYEWALGELVKAQPEDFSPETYIGYVNPYMFAGGKVEQ*	.	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0058	shell	direct	high	326	0.997	GCA_001054455.1_01450
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	39695	40318	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	39696	40319	GCA_001054455_1_32_59	GCA_001054455_1_32_59	+	95646	.	PRK11630	threonylcarbamoyl-AMP synthase. 	MSQFFYIHPENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYATVSNSAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGLRVPDNQIALDLLNALGEPILSCSLMLPDNEHMTYSDPEEIREYLERQVDLIIHGGYLGQEPTTVVDLTEESPVILREGSGRTAPFI*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0059	persistent	direct	high	623	0.998	GCA_001054455.1_01451
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	40358	41368	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	40359	41369	GCA_001054455_1_32_60	GCA_001054455_1_32_60	+	95646	.	PRK10700	23S rRNA pseudouridine(2605) synthase RluB. 	MKPIQKPVRQEREKQAGKQPHFERKERKNAVNSDIKSPPKAKVAKPSRQSTVEGEKLQKVLARAGQGSRREIEAMIAENRVSVDGKMATLGDRIDVHSGVKVRIDGRIINLQQAQKEVCRVLMYYKPEGELCTRSDPEGRATVFDRLPRLNGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVRVFGQVDDAMLARLRKGVQLEDGPANFKEIKFAGGVGINQWYDVTLMEGRNREVRRLWESQGIQVSRLIRIRYGNIKLMKGLPRGGWEEMDLENVNYLRELVGLPPETETKLDVTKPRRRPKSGQIRKAVKRYTELSKRYKK*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0060	persistent	direct	high	1010	0.999	GCA_001054455.1_01452
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	41381	42352	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	41382	42353	GCA_001054455_1_32_61	GCA_001054455_1_32_61	+	95646	.	PRK12681	HTH-type transcriptional regulator CysB. 	MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSITPAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYPDVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAKVKNLTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTPADKDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRPMVEKAEKLRDNSAVKKLFDNVELDVK*	mmseqs_cdd	nonviral_gene	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0061	persistent	direct	high	971	0.999	GCA_001054455.1_01453
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	42413	42814	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	42414	42815	GCA_001054455_1_32_62	GCA_001054455_1_32_62	-	95646	.	PF17500.2	Colicin-K	MSFLSKTLGGLSKAYYIRQFLFGLIFFAFMVVMGYDSYSRTGNPSIFLTNIILGLVCLFLYPYSRFVYESIIEYILGNNAFFVNAVLMLIIKFITMMLCFMFAIFIAPIGLTYLYFYHSKQEKLQNQTQNEKQ*	hhsuite_tools	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0062	shell	direct	high	401	0.998	GCA_001054455.1_01454
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	CDS	42878	43132	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	42879	43133	GCA_001054455_1_32_63	GCA_001054455_1_32_63	+	95646	.	PFAM:PF10078.8	transcriptional-regulator	MTKLRLSIHSDEYIWLRELLLNRRKELGLSQRAFGEKLGVVHSFIGKVETGDRRLDVFEFIEYCKGLDLDPIQVLREIEEKFRV*	phrogs_hmm	hypothetical_protein	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_CDS_0063	shell	direct	high	254	0.996	GCA_001054455.1_01455
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	65173	66774	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	1	1602	GCA_001054455_1_9_67	GCA_001054455_1_9_67	-	99360	.	6IDP_A	MATE family efflux transporter	MLATHPNPPYNSPNFSNFIFTMSNKTIAKNTLFLYIRMLFNMGAMLYISRVVLQVLGVEDFGIYNIVMGVVVLFSFFNGTMTATTQRFINVEKASNDIQRVNKVFNISILNHLLIIFIVLVLAETVGLWFLNHKLVIPAERLQAANIVYQLALIIALVEIIKVPFNAMIVAHEKMGFYAWLGLGETILKLASVFILSHITYYDKLITYGGLLLSVSLIVLSLYVLFTKYYFKEAARFRLYKDLSKTKEMVSFSGWMLMGQVAYVGSTQGLNMVSNLFFGVAVNAAVAIATQVEGAVYSFVNNFQMAANPQLVQSYAAKDYDRNRQLILSISKYSLYLMAILSAPVLYFTHTLLTFWLGDHLPQYTEQLVQAIIACLLISAMAGAFWMSALAIGTSTVKQYNIIVALIDLCTVPLAYYLFTLGYNPVFAFVGKFSTMVISQIYRLYFINKKIKFNQKEFVSYLVNVGVVFGLLLGIIYISDISRSYSLLEFIGQSIILEMVLICVILIFGLNTAEKNFLFSYLKKRVKNESTPY*	hhsuite_tools	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0001	persistent	direct	moderate	1539	0.961	GCA_001054455.1_00555
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	67157	67972	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	1985	2800	GCA_001054455_1_9_68	GCA_001054455_1_9_68	-	99360	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRFRPYVETGEFVNVGLLMCEPEKKKLTYRLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVNRLFTGSAQEMATFFHHYIDIKEGIVQYSNAAVGIVDNPQDYFERLYAQFIQKAGVKEESQEQTILRHYKALFKQENDRVLSQYKQYMVNGDYAKFSLPLALKNQQDKQILKAVKPLVFDQIESPSMIEHCDNWVAKINRAEEEGLIKRDNILFALDTPSTAHKANILDTIKRTFDRFNLQHISWNEDRQILDFAKSI*	mmseqs_cdd	nonviral_gene	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0002	shell	direct	high	815	0.999	GCA_001054455.1_00556
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	67969	68706	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	2797	3534	GCA_001054455_1_9_69	GCA_001054455_1_9_69	-	99360	.	PF09192.10	Actin-fragmin kinase, catalytic	MDNIVFIKERMEMGITHPFICQTENNEWYIVKTLNMMPISQLLAEVIGSKLVAEIGLPCPPVKFIYIPLQATLYVKPDWKDDLLIGPAFGSNYISYAKVAKTAQAKNTVYLSEQEQKWLYMFDRWILNSDRTASLIGTGNINLLFDEEQKKILVIDHNLAFDENADFSEHIFAPPNRTWRLDWVDKQTFTEKAIDILRNFDDIYKSIPDDWFARDEQFQEIETQINRIRSILNRITEDCYWDNIE*	hhsuite_tools	nonviral_gene	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0003	shell	direct	high	737	0.999	GCA_001054455.1_00557
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	69522	69929	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	4350	4757	GCA_001054455_1_9_70	GCA_001054455_1_9_70	+	99360	.	PFAM:PF06141.10	Minor-tail-protein	MLIHNEVRNEIVTLIKNNIPEIGNVYNGRAFFTSLKQQLPAISVFLDDAECDFKVMGESEWQAELNISIFLPYSEGEPNIDRIAEKVNSLITFTGYRHIQFVRGIQYRYGYDEDNASWMNGTLSYLIEYGRAPIK*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0004	cloud	direct	high	407	0.998	GCA_001054455.1_00558
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	69944	71134	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	4772	5962	GCA_001054455_1_9_71	GCA_001054455_1_9_71	+	99360	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLDETESVDFDKLKDLVKQLSDEISKYETVADEERNLGAQSNPLETRSTKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKEVMKRLTDDSVMRQLCNVVRLPIGAKEYKKLVSAGGATVEHGTEGTARNGTATPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEITETFTETEEVDLTSGDGNKKSKGLLTYERTTENDKVRPFGKLQKIEVAGAAKIEADTLIDAFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDYIWRDGLTTDAPATLLGRPVYFLETMPTGGANQAVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0005	shell	direct	high	1190	0.999	GCA_001054455.1_00559
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	71179	71745	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	6007	6573	GCA_001054455_1_9_72	GCA_001054455_1_9_72	+	99360	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATISTDEENQKLIGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPNTTIGKDLLVSVSRGDITGMSFGFRASQEEWDFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQEHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0006	shell	direct	high	566	0.998	GCA_001054455.1_00560
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	71747	72979	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	6575	7807	GCA_001054455_1_9_73	GCA_001054455_1_9_73	+	99360	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGEYIYQITDLNGVTKNYLQDEILHLRHSSVDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYANFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRHLIEFDTSDLLRTSQNERFNSYDVAIKAGVMSPNEVRRREGLPPYAGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0007	shell	direct	high	1232	0.999	GCA_001054455.1_00561
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	72963	73313	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	7791	8141	GCA_001054455_1_9_74	GCA_001054455_1_9_74	+	99360	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVITIEARNYPRERETNLHGERKAFWRHIATVRASVEPLQGREYFSGPFQMGENIIRIRYIEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0008	cloud	direct	high	350	0.997	GCA_001054455.1_00562
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	73300	73614	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	8128	8442	GCA_001054455_1_9_75	GCA_001054455_1_9_75	+	99360	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MANINLTLDEIKAHLNLDHDLDDELLEAYKAATLEVCKKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0009	shell	direct	high	314	0.997	GCA_001054455.1_00563
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	73625	73981	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	8453	8809	GCA_001054455_1_9_76	GCA_001054455_1_9_76	+	99360	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPGCRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQAAPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	74302	74676	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	9130	9504	GCA_001054455_1_9_77	GCA_001054455_1_9_77	+	99360	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0011	shell	direct	high	374	0.997	GCA_001054455.1_00564
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	74684	76351	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	9512	11179	GCA_001054455_1_9_78	GCA_001054455_1_9_78	+	99360	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVTRYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYDDLIFELSDEHKQALEQFNGIDL*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0012	shell	direct	high	1667	0.999	GCA_001054455.1_00565
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	76362	76817	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	11190	11645	GCA_001054455_1_9_79	GCA_001054455_1_9_79	+	99360	.	PFAM:PF04883.11	tail-component	MGSFSNAIEQFRIKIENQLMTEQPKAIKKALNAAAQVLKDEIKPIVPTLSKSTDFRKKGTVKNNVRHRTRLFKDKSGGVTIVRIRRTKGRRMASVRDNTKDRTDPFYWFMLDRGTKKMSGAHFMERAWGKGKSRAINTAKKVFISEMKKLN*	hallmark_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0013	cloud	direct	high	455	0.998	GCA_001054455.1_00566
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	77207	78205	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	12035	13033	GCA_001054455_1_9_80	GCA_001054455_1_9_80	+	99360	.	.	hypothetical protein	MLNLPPRKEYTLNQALEYLRKFHNEDRIDKEDLLYHAKEGNLKTVVFINGGRDLYNSVRGDYFTISRINRKELTELWLLDNDVKIIENNNLNVEKEIHLSTVYALANEYLGTWFAIPKTKRMTKYPLQNILIGKNVDDDLRKLSPINEFEFGGYFRVDPSDYGQDLQEILDSNVIYKKGYNEFEITEHSNAYFSFMLSPENTYCELPISIDDILILHDDLMDFVGLDSRLTNDPKKEIEKLKKEIEEKQKIIDSLRLINPKGRISSPQKQLFALLVKRCYSDIKSRNKLFDVINADLKSLEIRNDDISADTFYKLIDESNDIIKAIFPPKKS*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0014	cloud	direct	high	998	0.999	GCA_001054455.1_00568
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	78393	78596	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	13221	13424	GCA_001054455_1_9_81	GCA_001054455_1_9_81	+	99360	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLISGETACHIVGFGRTKLNLLVKAKKFPQPIRFSQNFVRWDLEEVNQWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0015	shell	direct	high	203	0.995	GCA_001054455.1_00569
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	78687	79286	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	13515	14114	GCA_001054455_1_9_82	GCA_001054455_1_9_82	+	99360	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLIHKYYINNEIFYNSNPLQSAVKFGIISPQSEKVIASRGKLNYLLLANDSTPLNRAFFVRDIRTPKEYADFVFNLNPIILSMVERNEPSLTGCFPVETVFHLVTFYRPTVESLAVVPENLLLELTQMYQFIFAAIRRTDLSNHLQKIRITADNERNARAKLAREFVLVLAGRINLQSDRTLSANTFRSISFAEVVHA*	mmseqs_cdd	nonviral_gene	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0016	shell	direct	high	599	0.998	GCA_001054455.1_00570
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	79279	79608	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	14107	14436	GCA_001054455_1_9_83	GCA_001054455_1_9_83	+	99360	.	.	hypothetical protein	MLSYGTIQMALQDVVNSNDVSEQTLEKIRTESECLCESIEYGLMELGDMVSRLGHFADSKQDFDNRAMSNDNVKHIGALIQANAYFLNTLRNVSTDATYHLNGGNKGAK*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0017	shell	direct	high	329	0.997	GCA_001054455.1_00572
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	79608	79805	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	14436	14633	GCA_001054455_1_9_84	GCA_001054455_1_9_84	+	99360	.	.	hypothetical protein	MSNTKFPYTLVFTYDDGDQFIAGEYGTLREALQAKIRCKHEIGQADICGRVLEVITILKGEDNES*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0018	shell	direct	high	197	0.995	GCA_001054455.1_00573
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	79795	80001	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	14623	14829	GCA_001054455_1_9_85	GCA_001054455_1_9_85	+	99360	.	.	hypothetical protein	MKAKKIKAFKEPYVPTPEQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKVARNETK*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0019	shell	direct	high	206	0.995	GCA_001054455.1_00574
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	79988	80491	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	14816	15319	GCA_001054455_1_9_86	GCA_001054455_1_9_86	+	99360	.	.	hypothetical protein	MKPNNPMEQLKQWKAASDKNLVSSGEKRHQLQKAPPVAKSATGNEEQKTEKRKGKLFFNPLALKYSQISRQFQLIQDSNKRCLEVYPGDFHHKIKFRDEIVDLMNKLAGGGNLLNALAKEGNLSREDTAKLKYFNQANKYLLYKFSEVVEQIGALNSERAEQQKGSK*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0020	shell	direct	high	503	0.998	GCA_001054455.1_00575
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	80493	80936	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	15321	15764	GCA_001054455_1_9_87	GCA_001054455_1_9_87	+	99360	.	.	hypothetical protein	MNMNEKLDYSNLSAVELKAIMYSQMNCEKKEGEAHYLPLPYLGETIVTLAEIFESYPSEKLYTLRNLHDELLAVNKHLLQLAPNPPSLNPEEIVASLTNDEIIDGLLKSSIVISLVETLTYFQKVVAERIDDIENGVLKGVNNGSIN*	.	hypothetical_protein	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0021	shell	direct	high	443	0.998	GCA_001054455.1_00576
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	80920	82689	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	15748	17517	GCA_001054455_1_9_88	GCA_001054455_1_9_88	+	99360	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPHEPYSDLFVLAGSKAWKAWDDGKGEEWLLLCSLVEGLESKQKPVILGENQLNNISLTRIAKEDQQLVKIAQYGELKQEEITAICQNLAKNTSAREVKLIDAAAQVKEDLSSYIQRLRTDKKTADLATQLAPPEKLKENDGVNKKARALTKWLNMDLALNPKDRELYRYDGISWQLVDKFEFLDNAVAFFDEQDFNYSARSIESIIDTIKIQSPKMGTQAQELIAFNNGTLNRTTLEFLPHYRENWLMSYIPHEYLNSAQNTPYFDKWLEFVSGGKESKKNAILAALYAVLTNRNDWQLFFEVTGDGGSGKSVFANIATLLAGEQNTESGRLIDLDEPRGRENFVGKTLLICPEQSRYGGDGGGLKSITGGDPVNIDPKHRTKFKAVIPAVVLIVNNEATRFTERSGGIERRRVIFHFDKVVPENERDPNIMDKIEREVGGIIYKLIHTFEQPETAKAALKEQQTSDEALEIKSESDHITEFCGYFYTTPQNDGLYIGNANQVNKSRTHLYPAYLAFAVASGITNTLTLRNFSNSLKQGFAQHKNKFEFSKVKGKYGYRSNVHFKNYEEFQNEFNS*	rep_hall_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0022	shell	direct	high	1769	0.999	GCA_001054455.1_00577
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	82862	84079	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	17690	18907	GCA_001054455_1_9_89	GCA_001054455_1_9_89	-	99360	.	PDB:1Z19_B	Integrase	MPRVTKPLTNTEVDKAKTKDKEYNLSDGNGLFLRIKPTGAKAWIFNYYHPVTNKRTSFTIGTYPAITLAQARQKREEYRALLAQSIDPQEYIKEQELIKNGQNENTFYKVALLWKEKRSKEIEPMTMEKNWARLENYLFPTLGNYPIDDISSPLLIKTVRQLNEKGFNDTLHRLLNLANQILNYAVTIGLISFNSCLKASDAYHKEPQKHHPAIKPEELPKLLQDFKNSSRDHLTKVLFRWQLLSMVRPAEAVSVEWSEIDFDKKLWTIPAEKMKKTRQGAFPHIVPLSSLMMDILKELKPITGDDKFVFSHYHKPNQSASKELIANALRKIGYKGIQDAHGLRSIARTFLENQQVDFRIAESCLAHSIGNKTSQAYNRYDYVELRRPVMQLWSDFVEQCEKESV*	common_virus_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0023	shell	direct	high	1217	0.999	GCA_001054455.1_00578
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	84575	86011	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	19403	20839	GCA_001054455_1_9_90	GCA_001054455_1_9_90	+	99360	.	PRK05826	pyruvate kinase; Provisional	MSRKLRRTKIVCTMGPATDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRAIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGNQEAVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTEGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDYLAVSFPRSSADLNYARELAKQAGLEAKIVAKVERAETVVDDASMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPAETVATMARVCLGAEKMPSINVSHHRLDREFRDIEESVAMSAMYAANHLSGIAAIITLSHSGRTPLLMSRISSGLPIFALSRVQETLNRCALYRGVTPVHFDGESRSSAGAKAAINLLKEKGYLVSGDLVLLTQGDESEGTTNVCRTLTVE*	mmseqs_cdd	nonviral_gene	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0024	persistent	direct	high	1436	0.999	GCA_001054455.1_00580
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	CDS	86161	87567	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	20989	22395	GCA_001054455_1_9_91	GCA_001054455_1_9_91	+	99360	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQRQIQSSDQKTEQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIAEDFYTFAHKAIFQTMEELMRNQTPIDLITLDQALKAKGISDSVGGFAYLADLSNNTPNAINILAYAEIVREKAILRELIAVGNRIAENSYSPKGKDIKMVLDEAEREVFAIAEKRSSSTEGPQNVISVLESTIARIDTLSKLENHSGVTGVTTGFVDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASDKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDETEWSKIASVFGMFKQKNNLYIDDSSGLTPTELRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLAFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_CDS_0025	persistent	direct	high	1406	0.999	GCA_001054455.1_00581
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	tRNA	13706	13781	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	13707	13782	tRNA-Asn	tRNA-Asn	+	95646	.	tRNAscan-SE score: 66.7	Asn	NA	tRNAscan-SE	.	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote	cenote	tRNA	5948	6022	GCA_001054455.1	JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455.1_JVSA01000037.1	GCA_001054455.1|JVSA01000037.1	GCA_001054455_1_32	GCA_001054455_1_32@C0	5949	6023	tRNA-Met	tRNA-Met	-	95646	.	tRNAscan-SE score: 50.4	Met	NA	tRNAscan-SE	.	C0	43133	0	43133	GCA_001054455.1|JVSA01000037.1@region_1_43133@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote	cenote	tRNA	84274	84347	GCA_001054455.1	JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455.1_JVSA01000013.1	GCA_001054455.1|JVSA01000013.1	GCA_001054455_1_9	GCA_001054455_1_9@C1	19102	19175	tRNA-Val	tRNA-Val	-	99360	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C1	22395	65173	87568	GCA_001054455.1|JVSA01000013.1@region_65174_87568@tool_cenote_tRNA_0001	.	.	.	.	.	.